RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF13A (Homo sapiens)

Ensembl gene IDs: ENSG00000137177

Ensembl transcript IDs: ENST00000259711.11, ENST00000358380.10, ENST00000378814.9, ENST00000378826.6, ENST00000378843.6, ENST00000502297.5, ENST00000502704.2, ENST00000503342.1, ENST00000506044.1, ENST00000514714.1, ENST00000636847.1

Found 1522 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGTGGCCCAGGAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTaGGGTCCAGCCAGGCGGCAGCATGTTTTAGAGATGGGGCTGGTG +
Preference number: 1 (lower is better)
Translates to: RWPRKCTVWILQLLV*GPARRQHVLEMGLV
Trigger: CACCAGCCCCATCTCTAAAACATGCTGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTCCTGGGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR TCA 90 bp TCTTACAGTAATACGGCTCTCTTCATTCCACCTGCCCAGCTGGGCTaGGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGTCATTG +
Preference number: 1 (lower is better)
Translates to: SYSNTALFIPPAQLG*ATVQATVESGPQSL
Trigger: CAATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAATGAAGAGAGCCGTATTACTGTAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR CCA 90 bp TGTTTTCTTACAGTAATACGGCTCTCTTCATTCCACCTGCCCAGCTaGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGT +
Preference number: 1 (lower is better)
Translates to: CFLTVIRLSSFHLPS*AEPRSRQLWSQDPS
Trigger: ACTGGGGTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAATGAAGAGAGCCGTATTACTGTAAGAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR GCA 90 bp TGTGTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATaGAGCCAGGGTTATGTGCCTGAGGTGGAGGCATGCTCTGCAAAG +
Preference number: 1 (lower is better)
Translates to: CVLLACCCHCFLRVQ*SQGYVPEVEACSAK
Trigger: CTTTGCAGAGCATGCCTCCACCTCAGGCACATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR TCA 90 bp ACGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTGCTTCCTaGGGGTACAATGCAGCCAGGGTTATGTGCCTGAGGTGGAGGCAT +
Preference number: 1 (lower is better)
Translates to: TFAIVFYWHAAAIAS*GYNAARVMCLRWRH
Trigger: ATGCCTCCACCTCAGGCACATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR GCA 90 bp TCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTaGTTCCTGAGGGTACAATGCAGCCAGGGTTATGTGCCTGAGGTG +
Preference number: 1 (lower is better)
Translates to: SSHVCYCVLLACCCH*FLRVQCSQGYVPEV
Trigger: CACCTCAGGCACATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR CCA 90 bp GTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTGTCACAAACAACTaGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGG +
Preference number: 1 (lower is better)
Translates to: VSLLLCGLIFAVTNN*MNLSYQVVAVKGLW
Trigger: CCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTTGTGACAGCAAAGATGAGCCCACAGAGAAGCAGGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
3UTR GCA 90 bp CAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTGCTaGCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTATGTGCCT +
Preference number: 1 (lower is better)
Translates to: QSSSHVCYCVLLACC*HCFLRVQCSQGYVP
Trigger: AGGCACATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR TCA 90 bp CAGCAGCAACAACAAACAAGAGATTCTACCATGACTCTGCATGCTTaGGAAAGAGGAATTCGAGAACGGGAACCATGGAGTGATGACCGT +
Preference number: 1 (lower is better)
Translates to: QQQQQTRDSTMTLHA*ERGIREREPWSDDR
Trigger: ACGGTCATCACTCCATGGTTCCCGTTCTCGAATTCCTCTTTCTCAAGCATGCAGAGTCATGGTAGAATCTCTTGTTTGTTGTTGCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR GCA 90 bp TTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTaGTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTATGTG +
Preference number: 1 (lower is better)
Translates to: LQSSSHVCYCVLLAC*CHCFLRVQCSQGYV
Trigger: CACATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR GCA 90 bp AACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATaGTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTAT +
Preference number: 1 (lower is better)
Translates to: NLQSSSHVCYCVLLA*CCHCFLRVQCSQGY
Trigger: ATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR CCA 90 bp TTTCTCAGTGTGCTTATGAAACAAAGGACAGAGAATGGCAGCACGTaGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCAAA +
Preference number: 1 (lower is better)
Translates to: FLSVLMKQRTENGST*LGSQGNYGTKLAVK
Trigger: TTTGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCTCTGTCCTTTGTTTCATAAGCACACTGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR TCA 90 bp CAGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTaGACCATTGAACTTCATAGCTCAGTCCATCTCCTCAGCATTTTC +
Preference number: 1 (lower is better)
Translates to: QGHLYSIISCKHGKG*TIELHSSVHLLSIF
Trigger: GAAAATGCTGAGGAGATGGACTGAGCTATGAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR CCA 90 bp CCCCAGTCATTGTCAACAGTTATAATACAATGTCAAGTCAGCAGGTaGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCT +
Preference number: 1 (lower is better)
Translates to: PQSLSTVIIQCQVSR*RGRWKTKEYSCEIS
Trigger: AGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACCTGCTGACTTGACATTGTATTATAACTGTTGACAATGACTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR TCA 90 bp GGTAGAGTTTCAGCCTACCTGTGGCAAAATATATATAAGCCATCCTaGATGCAAGGCTGGCACCAAGGTATTGGAATATATTTTGCCAGC +
Preference number: 1 (lower is better)
Translates to: GRVSAYLWQNIYKPS*MQGWHQGIGIYFAS
Trigger: GCTGGCAAAATATATTCCAATACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGTAGGCTGAAACTCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR GCA 90 bp GAGTTTCAGCCTACCTGTGGCAAAATATATATAAGCCATCCTGAATaGAAGGCTGGCACCAAGGTATTGGAATATATTTTGCCAGCTAAT +
Preference number: 1 (lower is better)
Translates to: EFQPTCGKIYISHPE*KAGTKVLEYILPAN
Trigger: ATTAGCTGGCAAAATATATTCCAATACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGTAGGCTGAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR TCA 90 bp ACACATAATCCTTCAATGTCTCCATTTGTAGGAGAATTTTACAAATaGAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCA +
Preference number: 1 (lower is better)
Translates to: THNPSMSPFVGEFYK*RHDSRVICIRSSPA
Trigger: TGCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAATTCTCCTACAAATGGAGACATTGAAGGATTATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR TCA 90 bp ATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGTACCTTATaGTTTTCTACAAATCACCTTTATCTGCATTTTAGTGTGCAGCCT +
Preference number: 1 (lower is better)
Translates to: IRDRPSCFVTKSSTL*FSTNHLYLHFSVQP
Trigger: AGGCTGCACACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR GCA 90 bp GTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGTaGAGCCTTGTCTGTCTCCAGACATACTATAGATACACATTTCAT +
Preference number: 1 (lower is better)
Translates to: VPYDFLQITFICILV*SLVCLQTYYRYTFH
Trigger: ATGAAATGTGTATCTATAGTATGTCTGGAGACAGACAAGGCTGCACACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR TCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTCCAGCTTCTGGTCTaGGGTCCAGCCAGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVLQLLV*GPARRQ
Trigger: CTGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAG...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR CCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTGCCGCTTCTCCCACTaGGGAGGGGAAAGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQCRFSH*GGERRW
Trigger: CCACCTCCTTTCCCCTCCCCAGTGGGAGAAGCGGCA...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR CCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGTGCCGCTTCTCCCACTaGGGAGGGGAAAGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVCRFSH*GGERRW
Trigger: CCACCTCCTTTCCCCTCCCCAGTGGGAGAAGCGGCA...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR CCA 90 bp CTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTATCGAGAACGGGAACCATaGAGTGATGACCGTGCATGT +
Preference number: 2 (lower is better)
Translates to: LLACCCHCFLRVQCSQGYREREP*SDDRAC
Trigger: ACATGCACGGTCATCACTCCATGGTTCCCGTTCTCG...ATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR CCA 90 bp GGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTTATGGGAGGGGAAAGGAGGTaGCCCAGGAAGTGCACGGTG +
Preference number: 2 (lower is better)
Translates to: GAGGRPKNIAVRFLSVLMGGERR*PRKCTV
Trigger: CACCGTGCACTTCCTGGGCCACCTCCTTTCCCCTCC...CATAAGCACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR TCA 90 bp CAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTGCCCAGGGTTATGTGCCTaGGGTGGAGGCATGCTCTGC +
Preference number: 2 (lower is better)
Translates to: QSSSHVCYCVLLACCCHCPGLCA*GGGMLC
Trigger: GCAGAGCATGCCTCCACCTCAGGCACATAACCCTGG...GCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR CCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGGGAGGGGAAAGGAGGTaGCCCAGGAAGTGCACGGTG +
Preference number: 2 (lower is better)
Translates to: RVICIRSSPANMVKGEPLGGERR*PRKCTV
Trigger: CACCGTGCACTTCCTGGGCCACCTCCTTTCCCCTCC...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR CAA 90 bp GAACCATGGAGTGATGACCGTGCATGTCCACATGCAGCACTCAGCTaGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: EPWSDDRACPHAALS*LMHTAASQVTQLCS
Trigger: AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGCTGCATGTGGACATGCACGGTCATCACTCCATGGTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR TCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGGGTGCTTGCCCAAGGTaGCCAGGCGAACAAAGACGC +
Preference number: 2 (lower is better)
Translates to: RVICIRSSPANMVKGEPLGACPR*PGEQRR
Trigger: GCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACC...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR GCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCTGTGGGCTCATCTTTaGTGTCACAAACAACTGGAT +
Preference number: 2 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPALWAHL*CHKQLD
Trigger: ATCCAGTTGTTTGTGACAGCAAAGATGAGCCCACAG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
3UTR-3UTR GCA 90 bp GGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTTATGAGGTGGCCCAGGAAGTaGACGGTGTGGATTCTCCAG +
Preference number: 2 (lower is better)
Translates to: GAGGRPKNIAVRFLSVLMRWPRK*TVWILQ
Trigger: CTGGAGAATCCACACCGTGCACTTCCTGGGCCACCT...CATAAGCACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR CCA 90 bp ATGCAGCAGCCAATTCTGCAGGCCAGAGTTAAACTACTGGAGAGATATGACAGGGCAATCCCAGTGCCTTaGGAGGCTGGGGCAAAAGAA +
Preference number: 2 (lower is better)
Translates to: MQQPILQARVKLLERYDRAIPVP*EAGAKE
Trigger: TTCTTTTGCCCCAGCCTCCCAAGGCACTGGGATTGC...CCTGTCATATCTCTCCAGTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR TCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAACCAAGTTGTTGCGGTaGAGGGCCTCTGGGGTTGAC +
Preference number: 2 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRETKLLR*RASGVD
Trigger: GTCAACCCCAGAGGCCCTTCACCGCAACAACTTGGT...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
3UTR-3UTR TCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCGGTGCTTGCCCAAGGTaGCCAGGCGAACAAAGACGC +
Preference number: 2 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCGACPR*PGEQRR
Trigger: GCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACC...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR TCA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGACTCCAGCTTCTGGTCTaGGGTCCAGCCAGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRLQLLV*GPARRQ
Trigger: CTGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAG...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR CCA 90 bp AGGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTAGGAAGTGCACGGTGTaGATTCTCCAGCTTCTGGTC +
Preference number: 2 (lower is better)
Translates to: RWRGRWKTKEYSCEISQCRKCTV*ILQLLV
Trigger: GACCAGAAGCTGGAGAATCCACACCGTGCACTTCCT...ACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR CCA 90 bp CTTTGCCAACCATCCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGCAGGCTGGCGTGCAGTaGCTCAAACAGCTCACTGGA +
Preference number: 2 (lower is better)
Translates to: LCQPSIYSYVGSDAIHLTQAGVQ*LKQLTG
Trigger: TCCAGTGAGCTGTTTGAGCCACTGCACGCCAGCCTG...CGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGGATGGTTGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502704.2
3UTR-3UTR GCA 90 bp CAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTGCAGGTACAACGGCTCATaGCTGCAATCCCAGTGCCTT +
Preference number: 2 (lower is better)
Translates to: QSSSHVCYCVLLACCCHCRYNGS*LQSQCL
Trigger: AAGGCACTGGGATTGCAGGCATGAGCCGTTGTACCT...GCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR GCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGATCTGCATTTTAGTGTaGAGCCTTGTCTGTCTCCAG +
Preference number: 2 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQICILV*SLVCLQ
Trigger: CTGGAGACAGACAAGGCTGCACACTAAAATGCAGAT...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR CCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCTGTCAAGTCAGCAGGTaGAGGGGCAGGTGGAAGACC +
Preference number: 2 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCCQVSR*RGRWKT
Trigger: GGTCTTCCACCTGCCCCTCCACCTGCTGACTTGACA...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR TCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCCAGCTGTGCAGGAAGTaGGCCTGCTTCTCTGTGGGC +
Preference number: 2 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPQLCRK*ACFSVG
Trigger: GCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTG...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
3UTR-3UTR TCA 90 bp CAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTGCCTGCTGCTTCACAGGTaGCACAACTCTGCTCTATTC +
Preference number: 2 (lower is better)
Translates to: QSSSHVCYCVLLACCCHCLLLHR*HNSALF
Trigger: GAATAGAGCAGAGTTGTGTCACCTGTGAAGCAGCAG...GCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR GCA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCAGGTGGCCCAGGAAGTaGACGGTGTGGATTCTCCAG +
Preference number: 2 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFRWPRK*TVWILQ
Trigger: CTGGAGAATCCACACCGTGCACTTCCTGGGCCACCT...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR GCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCACCCAAGTGACAAAGTaGCGCTTCTCCCACTGGGGA +
Preference number: 2 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCTQVTK*RFSHWG
Trigger: TCCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGT...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR GCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCAGCCAGGGTTATGTaGCTGAGGTGGAGGCATGCT +
Preference number: 2 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLAARVM*LRWRHA
Trigger: AGCATGCCTCCACCTCAGGCACATAACCCTGGCTGC...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR GCA 90 bp CCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGCCACTTTAATTTTCTCACTGGAGCCTCCTaGCTCAGTCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: PFIHMWGLMQFTSRHFNFLTGAS*LSLLSS
Trigger: GCTACTCAGGAGACTGAGGCAGGAGGCTCCAGTGAG...AAAATTAAAGTGGCGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502704.2
3UTR CAA 90 bp ACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATaGTGTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACA +
Preference number: 2 (lower is better)
Translates to: TEMVPELTIFFSRLL*CSTGMLLPLLPEGT
Trigger: TGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR CAA 90 bp ATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTaGCAGTCAAACATACATGTTCACACAAAAGAGTGGACAGCAAAA +
Preference number: 2 (lower is better)
Translates to: MAARGLVAKGIMAPN*QSNIHVHTKEWTAK
Trigger: TTTTGCTGTCCACTCTTTTGTGTGAACATGTATGTTTGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR TCA 90 bp GGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTTATGAAAAGCAGAGGCTGTTaGTTCACCCAAGTGACAAAG +
Preference number: 2 (lower is better)
Translates to: GAGGRPKNIAVRFLSVLMKSRGC*FTQVTK
Trigger: CTTTGTCACTTGGGTGAATCAACAGCCTCTGCTTTT...CATAAGCACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR GCA 90 bp ACCTGTGGCAAAATATATATAAGCCATCCTGAATGCAAGGCTGGCACCAAGGTACCGTGCATGTCCACATaGAGCACTCAGCTTGTTAAT +
Preference number: 2 (lower is better)
Translates to: TCGKIYISHPECKAGTKVPCMST*STQLVN
Trigger: ATTAACAAGCTGAGTGCTGCATGTGGACATGCACGG...TACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR TCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAAAACCACGCCACAGTaGAACCTACCAATCCAAAAC +
Preference number: 2 (lower is better)
Translates to: RVICIRSSPANMVKGEPLKTTPQ*NLPIQN
Trigger: GTTTTGGATTGGTAGGTTTCACTGTGGCGTGGTTTT...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR TCA 90 bp ACACACATTCCTTTCTTATACCCCATTTGTTGGATGAATGCCCCACAGGATTTTTTCATATGTGGGGTCTaGTGCAATTCACCTCACGCC +
Preference number: 2 (lower is better)
Translates to: THIPFLYPICWMNAPQDFFICGV*CNSPHA
Trigger: GGCGTGAGGTGAATTGCATCAGACCCCACATATGAA...AAAATCCTGTGGGGCATTCATCCAACAAATGGGGTATAAGAAAGGAATGTGTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000502704.2
3UTR-3UTR GCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAACTGTGGGCTCATCTTTaGTGTCACAAACAACTGGAT +
Preference number: 2 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRELWAHL*CHKQLD
Trigger: ATCCAGTTGTTTGTGACAGCAAAGATGAGCCCACAG...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
3UTR-3UTR GCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCAAATCACCTTTATCTaGATTTTAGTGTGCAGCCTT +
Preference number: 2 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVQITFI*ILVCSL
Trigger: AAGGCTGCACACTAAAATGCAGATAAAGGTGATTTG...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR CAA 90 bp AATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTaGCTATTGTGTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAG +
Preference number: 2 (lower is better)
Translates to: NMTEMVPELTIFFSR*LLCSTGMLLPLLPE
Trigger: CTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR TCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGAAAAGCAGAGGCTGTTaGTTCACCCAAGTGACAAAG +
Preference number: 2 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQKSRGC*FTQVTK
Trigger: CTTTGTCACTTGGGTGAATCAACAGCCTCTGCTTTT...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR GCA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCACAGGTGACACAACTCTaGTCTATTCTGCATAGTACA +
Preference number: 2 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSQVTQL*SILHST
Trigger: TGTACTATGCAGAATAGAGCAGAGTTGTGTCACCTG...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR GCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAACCCAAGTGACAAAGTaGCGCTTCTCCCACTGGGGA +
Preference number: 2 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSATQVTK*RFSHWG
Trigger: TCCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGT...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR CCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGGAGGTTTCTATACAGTaGAGGTGTGTAGTAAGTGCA +
Preference number: 2 (lower is better)
Translates to: RVICIRSSPANMVKGEPLEVSIQ*RCVVSA
Trigger: TGCACTTACTACACACCTCCACTGTATAGAAACCTC...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR CAA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATaGAACTTCATAGCTCAGTCCATCTCCTCAGCATTTTCCAGAATC +
Preference number: 2 (lower is better)
Translates to: ICIRSSPANMVKGEP*NFIAQSISSAFSRI
Trigger: GATTCTGGAAAATGCTGAGGAGATGGACTGAGCTATGAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR TCA 90 bp CTTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCAAGAGATTCTACCATaGCTCTGCATGCTTGAGAAA +
Preference number: 2 (lower is better)
Translates to: LKPTTRQYDRNGSGTYNLQEILP*LCMLEK
Trigger: TTTCTCAAGCATGCAGAGTCATGGTAGAATCTCTTG...AAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR TCA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGGTTGATTCACCCAAGTaGCAAAGTGCCGCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: RSPVPYDFLQITFICILVVDSPK*QSAASP
Trigger: GGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAAC...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR GCA 90 bp CTTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTTACCATGACTCTGCATaGTTGAGAAAGAGGAATTCG +
Preference number: 2 (lower is better)
Translates to: LKPTTRQYDRNGSGTYNLYHDSA*LRKRNS
Trigger: CGAATTCCTCTTTCTCAAGCATGCAGAGTCATGGTA...AAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR GCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGTGCAGCAGCCAATTCTaGAGGCCAGAGTTAAACTAC +
Preference number: 2 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLCSSQF*RPELNY
Trigger: GTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCA...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR GCA 90 bp ACCTGTGGCAAAATATATATAAGCCATCCTGAATGCAAGGCTGGCACCAAGGTATCTTCTTCTCACGTTTaGTATTGTGTTCTACTGGCA +
Preference number: 2 (lower is better)
Translates to: TCGKIYISHPECKAGTKVSSSHV*YCVLLA
Trigger: TGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGA...TACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR GCA 90 bp CCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGCCACTTTAATTTTGTAGAGATGGGGTTTTaGCATGTTGCAAAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: PFIHMWGLMQFTSRHFNFVEMGF*HVAKAG
Trigger: ACCAGCCTTTGCAACATGGCAAAACCCCATCTCTAC...AAAATTAAAGTGGCGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502704.2
3UTR-3UTR TCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCTTCTCAGTGTGCTTATaGAACAAAGGACAGAGAATG +
Preference number: 2 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCFSVCL*NKGQRM
Trigger: CATTCTCTGTCCTTTGTTTCATAAGCACACTGAGAA...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR GCA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGAATCTGCATTTTAGTGTaGAGCCTTGTCTGTCTCCAG +
Preference number: 2 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRICILV*SLVCLQ
Trigger: CTGGAGACAGACAAGGCTGCACACTAAAATGCAGAT...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR GCA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCCTGCAAAGAGGGATTTaGAAGCTCATTCTTAGGCAA +
Preference number: 2 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFLQRGI*KLILRQ
Trigger: TTGCCTAAGAATGAGCTTGCAAATCCCTCTTTGCAG...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR GCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCCAAATCACCTTTATCTaGATTTTAGTGTGCAGCCTT +
Preference number: 2 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCQITFI*ILVCSL
Trigger: AAGGCTGCACACTAAAATGCAGATAAAGGTGATTTG...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGGCTGTCACAAACAACTaGATGAATCTTTCCTACCAA +
Preference number: 2 (lower is better)
Translates to: LIISQLRSSSQNRLALRQAVTNN*MNLSYQ
Trigger: TTGGTAGGAAAGATTCATCCAGTTGTTTGTGACAGC...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
3UTR-3UTR CCA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGAGTTCACACAAAAGAGTaGACAGCAAAAATGTTGTCT +
Preference number: 2 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRVHTKE*TAKMLS
Trigger: AGACAACATTTTTGCTGTCCACTCTTTTGTGTGAAC...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGCTGTCACAAACAACTaGATGAATCTTTCCTACCAA +
Preference number: 2 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLAVTNN*MNLSYQ
Trigger: TTGGTAGGAAAGATTCATCCAGTTGTTTGTGACAGC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
3UTR-3UTR CAA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACAGATGGGGCTGGTGCTaGCCCAAGGTGACCAGGCGA +
Preference number: 3 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDRWGWC*PKVTRR
Trigger: TCGCCTGGTCACCTTGGGCAAGCACCAGCCCCATCT...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR CAA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGAGATGGGGCTGGTGCTaGCCCAAGGTGACCAGGCGA +
Preference number: 3 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGRWGWC*PKVTRR
Trigger: TCGCCTGGTCACCTTGGGCAAGCACCAGCCCCATCT...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR GCA 72 bp CTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATaGAGCCAGGGTTATGTGCCTGAGGTGGAGGCATGC +
Preference number: 3 (lower is better)
Translates to: LACCCHCFLRVQ*SQGYVPEVEAC
Trigger: GCATGCCTCCACCTCAGGCACATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR TCA 72 bp AGGAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTaGGGTCCAGCCAGGCGGCAGCATGTTTTAGAGATG +
Preference number: 3 (lower is better)
Translates to: RKCTVWILQLLV*GPARRQHVLEM
Trigger: CATCTCTAAAACATGCTGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR TCA 72 bp ATTGTGTTCTACTGGCATGCTGCTGCCATTGCTTCCTaGGGGTACAATGCAGCCAGGGTTATGTGCCTGAGG +
Preference number: 3 (lower is better)
Translates to: IVFYWHAAAIAS*GYNAARVMCLR
Trigger: CCTCAGGCACATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR CAA 90 bp ACCTGTGGCAAAATATATATAAGCCATCCTGAATGCAAGGCTGGCACCAAGGTATGCAATCCCAGTGCCTaGGGAGGCTGGGGCAAAAGA +
Preference number: 3 (lower is better)
Translates to: TCGKIYISHPECKAGTKVCNPSA*GGWGKR
Trigger: TCTTTTGCCCCAGCCTCCCAAGGCACTGGGATTGCA...TACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR CAA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGAAGAGATCGCCCAAGTaGCTTTGTAACGAAGTCCAG +
Preference number: 3 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQKRSPK*LCNEVQ
Trigger: CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTT...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR CAA 90 bp ATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCAAAGAGATCGCCCAAGTaGCTTTGTAACGAAGTCCAG +
Preference number: 3 (lower is better)
Translates to: MAARGLVAKGIMAPNLQSKRSPK*LCNEVQ
Trigger: CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTT...TGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR GCA 72 bp GTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTaGTTCCTGAGGGTACAATGCAGCCAGGGTTATGTG +
Preference number: 3 (lower is better)
Translates to: VCYCVLLACCCH*FLRVQCSQGYV
Trigger: CACATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR GCA 72 bp TCCACATGCAGCACTCAGCTTGTTAATGCACACTGCTaGTTCACAGGTGACACAACTCTGCTCTATTCTGCA +
Preference number: 3 (lower is better)
Translates to: STCSTQLVNAHC*FTGDTTLLYSA
Trigger: TGCAGAATAGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGCTGCATGTGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR GCA 72 bp TCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATaGTGCTGCCATTGCTTCCTGAGGGTACAATGCAGC +
Preference number: 3 (lower is better)
Translates to: SSSHVCYCVLLA*CCHCFLRVQCS
Trigger: GCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR CAA 90 bp CAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTGCGGGCAAAAGAATCACTaGAGGCCAGGAGTTTCAGAC +
Preference number: 3 (lower is better)
Translates to: QSSSHVCYCVLLACCCHCGQKNH*RPGVSD
Trigger: GTCTGAAACTCCTGGCCTCAAGTGATTCTTTTGCCC...GCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR CCA 72 bp GTGCTTATGAAACAAAGGACAGAGAATGGCAGCACGTaGCTTGGTAGCCAAGGGAATTATGGCACCAAACTT +
Preference number: 3 (lower is better)
Translates to: VLMKQRTENGST*LGSQGNYGTKL
Trigger: AAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCTCTGTCCTTTGTTTCATAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR CAA 90 bp CTTTGCCAACCATCCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGTGGGGTTTTGCCATGTaGCAAAGGCTGGTCTTGAAA +
Preference number: 3 (lower is better)
Translates to: LCQPSIYSYVGSDAIHLTWGFAM*QRLVLK
Trigger: TTTCAAGACCAGCCTTTGCAACATGGCAAAACCCCA...CGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGGATGGTTGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502704.2
3UTR CCA 72 bp TGCAGCAGCCAATTCTGCAGGCCAGAGTTAAACTACTaGAGAGATATGACAGGAATAAACAGATTCTGTGGC +
Preference number: 3 (lower is better)
Translates to: CSSQFCRPELNY*RDMTGINRFCG
Trigger: GCCACAGAATCTGTTTATTCCTGTCATATCTCTCCAGTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR CAA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGAAACAGATTAGAGCATaGACTCCAGATTCTACAGTA +
Preference number: 3 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVKQIRA*TPDSTV
Trigger: TACTGTAGAATCTGGAGTCAATGCTCTAATCTGTTT...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR TCA 72 bp CAACAAACAAGAGATTCTACCATGACTCTGCATGCTTaGGAAAGAGGAATTCGAGAACGGGAACCATGGAGT +
Preference number: 3 (lower is better)
Translates to: QQTRDSTMTLHA*ERGIREREPWS
Trigger: ACTCCATGGTTCCCGTTCTCGAATTCCTCTTTCTCAAGCATGCAGAGTCATGGTAGAATCTCTTGTTTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR TCA 72 bp CTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTaGACCATTGAACTTCATAGCTCAGTCCATCTCCTC +
Preference number: 3 (lower is better)
Translates to: LYSIISCKHGKG*TIELHSSVHLL
Trigger: GAGGAGATGGACTGAGCTATGAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR GCA 72 bp GCAACAACAAACAAGAGATTCTACCATGACTCTGCATaGTTGAGAAAGAGGAATTCGAGAACGGGAACCATG +
Preference number: 3 (lower is better)
Translates to: ATTNKRFYHDSA*LRKRNSRTGTM
Trigger: CATGGTTCCCGTTCTCGAATTCCTCTTTCTCAAGCATGCAGAGTCATGGTAGAATCTCTTGTTTGTTGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR GCA 72 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTaGTATTGTGTTCTACTGGCATGCTGCTGCCATTGC +
Preference number: 3 (lower is better)
Translates to: KWFRNLQSSSHV*YCVLLACCCHC
Trigger: GCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR CAA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGCATGCAGCACTCAGCTaGTTAATGCACACTGCTGCT +
Preference number: 3 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLHAALS*LMHTAA
Trigger: AGCAGCAGTGTGCATTAACAAGCTGAGTGCTGCATG...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR CAA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAAAAAGCAGAGGCTGTaGATTCACCCAAGTGACAAA +
Preference number: 3 (lower is better)
Translates to: RVICIRSSPANMVKGEPLKKQRL*IHPSDK
Trigger: TTTGTCACTTGGGTGAATCAACAGCCTCTGCTTTTT...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR CCA 72 bp TTGTCAACAGTTATAATACAATGTCAAGTCAGCAGGTaGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGT +
Preference number: 3 (lower is better)
Translates to: LSTVIIQCQVSR*RGRWKTKEYSC
Trigger: ACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACCTGCTGACTTGACATTGTATTATAACTGTTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR CAA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGTTCCCAAAACAGACTaGCTCTCCGACAGAGACAGC +
Preference number: 3 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLVPKTD*LSDRDS
Trigger: GCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
3UTR-3UTR CAA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCAAAAAGCAGAGGCTGTaGATTCACCCAAGTGACAAA +
Preference number: 3 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCKKQRL*IHPSDK
Trigger: TTTGTCACTTGGGTGAATCAACAGCCTCTGCTTTTT...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR CAA 90 bp GGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTTATGATTATGGCACCAAACTaGCAGTCAAACATACATGTT +
Preference number: 3 (lower is better)
Translates to: GAGGRPKNIAVRFLSVLMIMAPN*QSNIHV
Trigger: AACATGTATGTTTGACTGCAAGTTTGGTGCCATAAT...CATAAGCACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR TCA 72 bp TCAGCCTACCTGTGGCAAAATATATATAAGCCATCCTaGATGCAAGGCTGGCACCAAGGTATTGGAATATAT +
Preference number: 3 (lower is better)
Translates to: SAYLWQNIYKPS*MQGWHQGIGIY
Trigger: ATATATTCCAATACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGTAGGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR-3UTR CAA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTACTCCTGGCTGTCCTaGTGTTTTCTTACAGTAATA +
Preference number: 3 (lower is better)
Translates to: VICIRSSPANMVKGEPLNYSWLS*CFLTVI
Trigger: TATTACTGTAAGAAAACACAAGGACAGCCAGGAGTA...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR-3UTR CAA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGTCTGTGGGCTCATCTTaGCTGTCACAAACAACTGGA +
Preference number: 3 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLSVGSS*LSQTTG
Trigger: TCCAGTTGTTTGTGACAGCAAAGATGAGCCCACAGA...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
3UTR GCA 72 bp CCTACCTGTGGCAAAATATATATAAGCCATCCTGAATaGAAGGCTGGCACCAAGGTATTGGAATATATTTTG +
Preference number: 3 (lower is better)
Translates to: PTCGKIYISHPE*KAGTKVLEYIL
Trigger: CAAAATATATTCCAATACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR GCA 72 bp CCAGTACCTTATGATTTTCTACAAATCACCTTTATCTaGATTTTAGTGTGCAGCCTTGTCTGTCTCCAGACA +
Preference number: 3 (lower is better)
Translates to: PVPYDFLQITFI*ILVCSLVCLQT
Trigger: TGTCTGGAGACAGACAAGGCTGCACACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCGCTACTCTGTGGCTaGCTGTCGGGGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDPLLCG*LSGESC
Trigger: GCAGCTCTCCCCCGACAGGCAGCCACAGAGTAGCGG...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACGCTGCGCTGTCTGGCTaGTGTAGGCCAGGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDAALSG*CRPGGQ
Trigger: CTGACCGCCTGGCCTACAGCAGCCAGACAGCGCAGC...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCACCTGCCCAGCTGGGCTaGGCCACGGTCCAGGCAACT +
Preference number: 4 (lower is better)
Translates to: EVHGVDSPASGLRSSQAAPAQLG*ATVQAT
Trigger: AGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGG...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCTACCGTCACCTCCCTaGGGCAGAATCCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDLPSPP*GRIPWL
Trigger: CAGCCAGGGGATTCTGCCCCAGGGAGGTGACGGTAG...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACTGCCGCTTCTCCCACTaGGGAGGGGAAAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDCRFSH*GGERRW
Trigger: CCACCTCCTTTCCCCTCCCCAGTGGGAGAAGCGGCA...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCACTCCAGCTTCTGGTCTaGGGTCCAGCCAGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: EVHGVDSPASGLRSSQAALQLLV*GPARRQ
Trigger: CTGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAG...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTTCGGGGGAGAGCTGCTaGCGGAGTTGCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPSGESC*RSCSSS
Trigger: GGAACTGGAGCAACTCCGCCAGCAGCTCTCCCCCGA...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp GGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGAGCTGGCTGGGGTGGTaGAGCCCATCGGAGACAGTC +
Preference number: 4 (lower is better)
Translates to: GWCLPKVTRRTKTPSCGLSWLGW*SPSETV
Trigger: GACTGTCTCCGATGGGCTCCACCACCCCAGCCAGCT...CAGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATATCCGACATGTTGGCTaGGCTCGCCCGGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHIRHVG*ARPAAR
Trigger: GCGAGCGGCCGGGCGAGCGCAGCCAACATGTCGGAT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259711.11
CDS-3UTR CCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACGCACAAGCGATGGTGTaGAGTGCTCGGTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDAQAMV*SARWSL
Trigger: CAGACTCCACCGAGCACTCCACACCATCGCTTGTGC...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACTCTGCATCCTTCGTCTaGATGGCCAGCTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDSASFV*MASWSE
Trigger: CTCAGACCAGCTGGCCATTCAGACGAAGGATGCAGA...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCATTGCTGCTCTCACCGTaGGGTTGTGCCTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: EVHGVDSPASGLRSSQAALLLSP*GCASLV
Trigger: GACCAGGGAGGCACAACCTCACGGTGAGAGCAGCAA...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACACAGCTGGGTGGTACTaGACACAAGGGTGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDTAGWY*TQGCRS
Trigger: TGAACGGCACCCTTGTGTGCAGTACCACCCAGCTGT...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp GGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGCCTCCCAGATGGAGCTaGCATTTCCAGCACACCGGT +
Preference number: 4 (lower is better)
Translates to: GWCLPKVTRRTKTPSCGLPPRWS*HFQHTG
Trigger: ACCGGTGTGCTGGAAATGGCAGCTCCATCTGGGAGG...CAGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCAGGAGTTCACGCCGGATaGATGGGGGCCAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: EVHGVDSPASGLRSSQAAGVHAG*MGANKL
Trigger: CAGCTTGTTGGCCCCCATGCATCCGGCGTGAACTCC...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp GGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGTTGACTGTGACGGCCTaGCGGAGCCGTTCAAGACTC +
Preference number: 4 (lower is better)
Translates to: GWCLPKVTRRTKTPSCGLLTVTA*RSRSRL
Trigger: GAGTCTTGAACGGCTCCGGCAGGCCGTCACAGTCAA...CAGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATTGGTATCCGACATGTTaGCTGCGCTCGCCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHWYPTC*LRSPGR
Trigger: GCGGCCGGGCGAGCGCAGCCAACATGTCGGATACCA...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259711.11
CDS-3UTR CCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACTCACCATGCCACAGCTaGGTGGTACTGCACACAAGG +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDSPCHS*VVLHTR
Trigger: CCTTGTGTGCAGTACCACCCAGCTGTGGCATGGTGA...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCACGCATCACTTCCACGTaGAGACGCCCTGCAACCTCC +
Preference number: 4 (lower is better)
Translates to: EVHGVDSPASGLRSSQAARITST*RRPATS
Trigger: GGAGGTTGCAGGGCGTCTCCACGTGGAAGTGATGCG...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCTCCACCACACGCTCTaGAACAGCTCCTGTAACACG +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDLHHTL*NSSCNT
Trigger: CGTGTTACAGGAGCTGTTCCAGAGCGTGTGGTGGAG...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACGTTATGTGCCTGAGGTaGAGGCATGCTCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDVMCLR*RHALLA
Trigger: AGCCAGGAGAGCATGCCTCCACCTCAGGCACATAAC...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502297.5
CDS-3UTR TCA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCAGGGTGCAGGACCGTTTaGTTCCCTTCCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: EVHGVDSPASGLRSSQAAGCRTV*FPSIST
Trigger: GGTGGAGATGGAAGGGAATCAAACGGTCCTGCACCC...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACTACTGCACACAAGGGTaGCGTTCACACAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDYCTQG*RSHRTL
Trigger: CAAGGTCCTGTGTGAACGGCACCCTTGTGTGCAGTA...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp TGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAAGTCAGCCCTACCCACTaGTCCACAAGCTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: WAEPRSRQLWSQDPSHCQVSPTH*STSWAS
Trigger: GGAAGCCCAGCTTGTGGAGCAGTGGGTAGGGCTGAC...TTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTCCCCAGGAATCCCACTaGCTGGGGCTGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGPQESH*LGLAPA
Trigger: TGCTGGTGCCAGCCCCAGGCAGTGGGATTCCTGGGG...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATGTTCTCGTCGGTTCATaGGCCGGACCCGGACGGCAA +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHVLVGS*AGPGRQ
Trigger: TTGCCGTCCGGGTCCGGCCCATGAACCGACGAGAAC...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGCTGCTCAGCATaGCCCATCATGGAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDPSCSA*PIMEKD
Trigger: ATCCTTTTCCATGATGGGCCATGCTGAGCAGCTGGG...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTAGGGCCGCTACTCTGTaGCTGCCTGTCGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGRAATL*LPVGGE
Trigger: CTCTCCCCCGACAGGCAGCCACAGAGTAGCGGCCCT...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTAGGGCCGCTACTCTGTaGCTGCCTGTCGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPARAATL*LPVGGE
Trigger: CTCTCCCCCGACAGGCAGCCACAGAGTAGCGGCCCT...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGGAGGCATGCTCTCCTaGCTTAGAAGAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPGGMLS*LRRGLA
Trigger: AGCAAGGCCTCTTCTAAGCCAGGAGAGCATGCCTCC...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502297.5
CDS-3UTR CCA 90 bp GGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGGTGTGGAGTGCTCGGTaGAGTCTGCATCCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: GWCLPKVTRRTKTPSCGLVWSAR*SLHPSS
Trigger: AGACGAAGGATGCAGACTCCACCGAGCACTCCACAC...CAGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGCAGAATCCCCTGGCTaGCTGGCTAATTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPAESPG*LANFAG
Trigger: CCCAGCAAAATTAGCCAGCCAGCCAGGGGATTCTGC...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATATCCTTGGACTGTGGTaGAGGCACCTCGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHILGLW*RHLGVH
Trigger: GTGGACCCCGAGGTGCCTTCACCACAGTCCAAGGAT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGGAACATTTGGTGTACTaGGGCTCCTCCGAATGTGCC +
Preference number: 4 (lower is better)
Translates to: GWCLPKVTRRTKTPSCGLEHLVY*GSSECA
Trigger: GGCACATTCGGAGGAGCCTCAGTACACCAAATGTTC...CAGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTCTGTCGGGGGAGAGCTaGTGGCGGAGTTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGLSGES*WRSCSS
Trigger: ACTGGAGCAACTCCGCCAGCAGCTCTCCCCCGACAG...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTCCGCTACTCTGTGGCTaGCTGTCGGGGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAPLLCG*LSGESC
Trigger: GCAGCTCTCCCCCGACAGGCAGCCACAGAGTAGCGG...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTCCCCAGGAATCCCACTaGCTGGGGCTGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPPQESH*LGLAPA
Trigger: TGCTGGTGCCAGCCCCAGGCAGTGGGATTCCTGGGG...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGATCCAGTCGGCAGGTaGCCCAGGAATCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPADPVGR*PRNPTA
Trigger: GGCAGTGGGATTCCTGGGGCACCTGCCGACTGGATC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATGGAGTTCACGCCGGATaGATGGGGGCCAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHGVHAG*MGANKL
Trigger: CAGCTTGTTGGCCCCCATGCATCCGGCGTGAACTCC...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp TGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAAAGGAGGGGTGCTTGCTaGTCTCACCGTGAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: WAEPRSRQLWSQDPSHCQRRGAC*SHREVV
Trigger: CACAACCTCACGGTGAGAGCAGCAAGCACCCCTCCT...TTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCGCATCACTTCCACGTaGAGACGCCCTGCAACCTCC +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHRITST*RRPATS
Trigger: GGAGGTTGCAGGGCGTCTCCACGTGGAAGTGATGCG...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCTCTTTGGAGTTTGGTaGACCTGGCAGTTACACAGC +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDLFGVW*TWQLHS
Trigger: GCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAG...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATGGCTGCCATGCTCCTTaGGCAGGATGGAGTTCACGC +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHGCHAP*AGWSSR
Trigger: GCGTGAACTCCATCCTGCCCAAGGAGCATGGCAGCC...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGCAGACAGGGTGGCATTaGAGGCACTGTGGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: GWCLPKVTRRTKTPSCGLQTGWH*RHCGKS
Trigger: ACTTTTCCCACAGTGCCTCCAATGCCACCCTGTCTG...CAGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGTTCTCAGGGATGCTCTaGGATGATGGGCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GWCLPKVTRRTKTPSCGLFSGML*DDGLPL
Trigger: CAAAGGGAGCCCATCATCCCAGAGCATCCCTGAGAA...CAGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGAGGAAGTGCACGGTGTaGATTCTCCAGCTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GWCLPKVTRRTKTPSCGLRKCTV*ILQLLV
Trigger: GACCAGAAGCTGGAGAATCCACACCGTGCACTTCCT...CAGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTGTTCCCGCTCATACATaGGCCGCTGCTCCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGVPAHT*AAAPLG
Trigger: CCCTAGAGGAGCAGCGGCTCATGTATGAGCGGGAAC...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTCAGGCATTAGGGGCTTaGAAAACTTTGGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPQALGA*KTLVAE
Trigger: CTCAGCCACCAAAGTTTTTCAAGCCCCTAATGCCTG...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGCCAGTCCTGCACAGTaGTTTGGAGTTTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPASPAQ*FGVFLR
Trigger: CCTGAGAAAAACTCCAAATCACTGTGCAGGACTGGC...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGGCCAGTCCTGCACAGTaGTTTGGAGTTTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GWCLPKVTRRTKTPSCGLASPAQ*FGVFLR
Trigger: CCTGAGAAAAACTCCAAATCACTGTGCAGGACTGGC...CAGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATAGCTGCTGGCGGAGTTaGTCCAGTTCCCGCTCATAC +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHSCWRS*SSSRSY
Trigger: GTATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTCTGTCGGGGGAGAGCTaGTGGCGGAGTTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPLSGES*WRSCSS
Trigger: ACTGGAGCAACTCCGCCAGCAGCTCTCCCCCGACAG...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCCTCCCAGATGGAGCTaGCATTTCCAGCACACCGGT +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHPPRWS*HFQHTG
Trigger: ACCGGTGTGCTGGAAATGGCAGCTCCATCTGGGAGG...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCACCCCAGGAATCCCACTaGCTGGGGCTGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: MAARGLVAKGIMAPNLQSPQESH*LGLAPA
Trigger: TGCTGGTGCCAGCCCCAGGCAGTGGGATTCCTGGGG...TGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCATTCGTTTTCACTCCTTaGTGCCAGGAGAGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: EVHGVDSPASGLRSSQAAFVFTP*CQESQR
Trigger: ACGCTGGCTCTCCTGGCAGCAAGGAGTGAAAACGAA...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTAGAATGTTTTCCACCTaGAGCACGCCTCGAGTGTAC +
Preference number: 4 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPRMFST*STPRVY
Trigger: GTACACTCGAGGCGTGCTGCAGGTGGAAAACATTCT...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACGGATCACTTTTGCGTTaGGGTCCTCATTCACAACAG +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDGSLLR*GPHSQQ
Trigger: CTGTTGTGAATGAGGACCCCAACGCAAAAGTGATCC...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTTCGGGGGAGAGCTGCTaGCGGAGTTGCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFASGESC*RSCSSS
Trigger: GGAACTGGAGCAACTCCGCCAGCAGCTCTCCCCCGA...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTCGGGGGAGAGCTGCTaGCGGAGTTGCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPSGESC*RSCSSS
Trigger: GGAACTGGAGCAACTCCGCCAGCAGCTCTCCCCCGA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGGCTGCCATGCTCCTTaGGCAGGATGGAGTTCACGC +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAGCHAP*AGWSSR
Trigger: GCGTGAACTCCATCCTGCCCAAGGAGCATGGCAGCC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGGTCCAACTGGTTCTCTaGCCAACCCTTGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: GWCLPKVTRRTKTPSCGLVQLVL*PTLVIF
Trigger: GAAGATGACAAGGGTTGGCCAGAGAACCAGTTGGAC...CAGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTAGCTGGCTGGGGTGGTaGAGCCCATCGGAGACAGTC +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPSWLGW*SPSETV
Trigger: GACTGTCTCCGATGGGCTCCACCACCCCAGCCAGCT...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCAGAGAATGGCAGCACGTaGCTTGGTAGCCAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: EVHGVDSPASGLRSSQAAENGST*LGSQGN
Trigger: ATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCTC...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGGGTGCAGGACCGTTTaGTTCCCTTCCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAGCRTV*FPSIST
Trigger: GGTGGAGATGGAAGGGAATCAAACGGTCCTGCACCC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGTGTCATCCCCCACCTTaGTACCGGACATCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGCHPPP*YRTSPG
Trigger: CCCTGGAGATGTCCGGTATCAAGGTGGGGGATGACA...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGTTCCCGCTCATACATaGGCCGCTGCTCCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPVPAHT*AAAPLG
Trigger: CCCTAGAGGAGCAGCGGCTCATGTATGAGCGGGAAC...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTATCCTTGGACTGTGGTaGAGGCACCTCGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAILGLW*RHLGVH
Trigger: GTGGACCCCGAGGTGCCTTCACCACAGTCCAAGGAT...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACAGATGCCTCCTGTGTTaGCATCTTTTGCCTGATGAA +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDRCLLC*HLLPDE
Trigger: TTCATCAGGCAAAAGATGTCAACACAGGAGGCATCT...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCAGCTGCTCATTGGCACTaGGGTCATCCGCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: EVHGVDSPASGLRSSQAAAAHWH*GHPHSN
Trigger: ATTTGAATGCGGATGACCTCAGTGCCAATGAGCAGC...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGCTGCCATTGCTTCCTaGGGGTACAATGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAAAIAS*GYNAAR
Trigger: CCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259711.11
CDS-3UTR TCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATTCTGCATCCTTCGTCTaGATGGCCAGCTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHSASFV*MASWSE
Trigger: CTCAGACCAGCTGGCCATTCAGACGAAGGATGCAGA...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTCAGCTGTGCAGGAAGTaGGCCTGCTTCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAQLCRK*ACFSVG
Trigger: GCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTG...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACAAAAGCAGAGGCTGTTaGTTCACCCAAGTGACAAAG +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDKSRGC*FTQVTK
Trigger: CTTTGTCACTTGGGTGAATCAACAGCCTCTGCTTTT...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCAATTTGCTTTTACCCTTaGCAGCTGCCTGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: EVHGVDSPASGLRSSQAAICFYP*QLPGQP
Trigger: TGGCTGACCAGGCAGCTGGCAAGGGTAAAAGCAAAT...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACGACGTCTCCATCAGATaGAATGTCAATCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDDVSIR*NVNLTV
Trigger: CACTGTGAGATTGACATTGCATCTGATGGAGACGTC...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTGCTGCATCCAGGTCATaGTCTGGCGGGCCCGTTTCT +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAAASRS*SGGPVS
Trigger: AGAAACGGGCCCGCCAGAGCATGACCTGGATGCAGC...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCCGCTACTCTGTGGCTaGCTGTCGGGGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGPLLCG*LSGESC
Trigger: GCAGCTCTCCCCCGACAGGCAGCCACAGAGTAGCGG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGCCGCTACTCTGTGGCTaGCTGTCGGGGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGPLLCG*LSGESC
Trigger: GCAGCTCTCCCCCGACAGGCAGCCACAGAGTAGCGG...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGCTGCGCTGTCTGGCTaGTGTAGGCCAGGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGAALSG*CRPGGQ
Trigger: CTGACCGCCTGGCCTACAGCAGCCAGACAGCGCAGC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTCACTGGGTCACCTTCTaGTGCGCTGTCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPHWVTF*CAVWLL
Trigger: CAGCAGCCAGACAGCGCAGCAGAAGGTGACCCAGTG...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTTTAGCTTTAACCAGCTaGTCTCGCAGTTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPLALTS*SRSFAR
Trigger: CCTGGCAAAACTGCGAGAGCAGCTGGTTAAAGCTAA...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCCTGCAACCTCCCCCTaGTGGCTGATGATAGGGACT +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAPATSP*WLMIGT
Trigger: AGTCCCTATCATCAGCCAGCAGGGGGAGGTTGCAGG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTATGTCAGCCCTACCCACTaGTCCACAAGCTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LLACCCHCFLRVQCSQGYVSPTH*STSWAS
Trigger: GGAAGCCCAGCTTGTGGAGCAGTGGGTAGGGCTGAC...ATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCATCGGAGACAGTCTTaGCGCCTGTTTTATTTGGTA +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDHRRQS*RLFYLV
Trigger: TACCAAATAAAACAGGCGGCAAGACTGTCTCCGATG...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp TGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACTCACCGTGAGGTTGTaGCTCCCTGGTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: WAEPRSRQLWSQDPSHCQLTVRL*LPGHSL
Trigger: TAGAGAATGACCAGGGAGGCACAACCTCACGGTGAG...TTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGGTTCTCGTCGGTTCATaGGCCGGACCCGGACGGCAA +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQVLVGS*AGPGRQ
Trigger: TTGCCGTCCGGGTCCGGCCCATGAACCGACGAGAAC...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCATGCCACAGCTGGGTaGTACTGCACACAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAHATAG*YCTQGC
Trigger: GCACCCTTGTGTGCAGTACCACCCAGCTGTGGCATG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGAGGGCCGCTACTCTGTaGCTGCCTGTCGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGRAATL*LPVGGE
Trigger: CTCTCCCCCGACAGGCAGCCACAGAGTAGCGGCCCT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGCAACCTCCCCCTGCTaGCTGATGATAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAATSPC*LMIGTA
Trigger: TGCAGTCCCTATCATCAGCCAGCAGGGGGAGGTTGC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATGGAGTTTGGTGGACCTaGCAGTTACACAGCCGATGG +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHGVWWT*QLHSRW
Trigger: CCATCGGCTGTGTAACTGCCAGGTCCACCAAACTCC...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTTCACGCCGGATGCATaGGGGCCAACAAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAFTPDA*GPTSCS
Trigger: TGAGCAGCTTGTTGGCCCCCATGCATCCGGCGTGAA...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGCTCCTTGGGCAGGATaGAGTTCACGCCGGATGCAT +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAAPWAG*SSRRMH
Trigger: ATGCATCCGGCGTGAACTCCATCCTGCCCAAGGAGC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACGACATTATGAACATTTaGTGTACTGAGGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDDIMNI*CTEAPP
Trigger: CGGAGGAGCCTCAGTACACCAAATGTTCATAATGTC...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGCACAAGCGATGGTGTaGAGTGCTCGGTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAAQAMV*SARWSL
Trigger: CAGACTCCACCGAGCACTCCACACCATCGCTTGTGC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTTGCAGCTGGCTGGGGTaGTGGAGCCCATCGGAGACA +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASCSWLG*WSPSET
Trigger: TGTCTCCGATGGGCTCCACCACCCCAGCCAGCTGCA...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGAGGTTGTGCCTCCCTaGTCATTCTCTAACTTGGAA +
Preference number: 4 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPEVVPP*SFSNLE
Trigger: TTCCAAGTTAGAGAATGACCAGGGAGGCACAACCTC...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp TGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAAAGCTTTTTGACTCGGTaGATGATTTCCCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WAEPRSRQLWSQDPSHCQSFLTR*MISPLL
Trigger: CAGCAGCGGGGAAATCATTCACCGAGTCAAAAAGCT...TTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCAGTTCTTGTCTTAGCATaGAGAGAATCGACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: EVHGVDSPASGLRSSQAAVLVLA*RESTSQ
Trigger: CTGGGAGGTCGATTCTCTTCATGCTAAGACAAGAAC...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTAGATGCCTCCTGTGTTaGCATCTTTTGCCTGATGAA +
Preference number: 4 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPRCLLC*HLLPDE
Trigger: TTCATCAGGCAAAAGATGTCAACACAGGAGGCATCT...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATGAACATTTGGTGTACTaGGGCTCCTCCGAATGTGCC +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHEHLVY*GSSECA
Trigger: GGCACATTCGGAGGAGCCTCAGTACACCAAATGTTC...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTTGGCATTGTAAACACTaGAGTCAGCAAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPWHCKH*SQQTPQ
Trigger: CTGTGGAGTTTGCTGACTTCAGTGTTTACAATGCCA...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGTGTCAACTCTTTGTTTaGGGACGGCCTGAAATCATG +
Preference number: 4 (lower is better)
Translates to: GWCLPKVTRRTKTPSCGLCQLFV*GRPEIM
Trigger: CATGATTTCAGGCCGTCCTCAAACAAAGAGTTGACA...CAGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTACCAAGTTGTTGCGGTaGAGGGCCTCTGGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFATKLLR*RASGVD
Trigger: GTCAACCCCAGAGGCCCTTCACCGCAACAACTTGGT...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCAGCTGTGCAGGAAGTaGGCCTGCTTCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASQLCRK*ACFSVG
Trigger: GCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTG...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTTGCTGCTCTCACCGTaGGGTTGTGCCTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQLLLSP*GCASLV
Trigger: GACCAGGGAGGCACAACCTCACGGTGAGAGCAGCAA...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGCCTGCCCAGCTGGGCTaGGCCACGGTCCAGGCAACT +
Preference number: 4 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMPAQLG*ATVQAT
Trigger: AGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGG...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTAAAACCACGCCACAGTaGAACCTACCAATCCAAAAC +
Preference number: 4 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPKTTPQ*NLPIQN
Trigger: GTTTTGGATTGGTAGGTTTCACTGTGGCGTGGTTTT...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTCTTCATAGTTGTCTaGGGCTGGGCTGATTGTGGC +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHLFIVV*GWADCG
Trigger: GCCACAATCAGCCCAGCCGCAGACAACTATGAAGAG...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGCTGCATCCAGGTCATaGTCTGGCGGGCCCGTTTCT +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASAASRS*SGGPVS
Trigger: AGAAACGGGCCCGCCAGAGCATGACCTGGATGCAGC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTGGAAGCCTCACTGGCTaGATCCAGGTCATGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAGSLTG*IQVMLW
Trigger: CCAGAGCATGACCTGGATGCAGCCAGTGAGGCTTCC...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCACTGGGTCACCTTCTaGTGCGCTGTCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASHWVTF*CAVWLL
Trigger: CAGCAGCCAGACAGCGCAGCAGAAGGTGACCCAGTG...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCACTCAGCCAGGAAGTTTaGTTCCCTCACCAAGGTATT +
Preference number: 4 (lower is better)
Translates to: EVHGVDSPASGLRSSQAALSQEV*FPHQGI
Trigger: AATACCTTGGTGAGGGAAGCAAACTTCCTGGCTGAG...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp TGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAATGGTCCACACTTGGGTaGTCTTTCCTTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: WAEPRSRQLWSQDPSHCQWSTLG*SFLSSS
Trigger: TGAGGAGGAAAGGAAAGAGCACCCAAGTGTGGACCA...TTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTCCTCCCAGATGGAGCTaGCATTTCCAGCACACCGGT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPPPRWS*HFQHTG
Trigger: ACCGGTGTGCTGGAAATGGCAGCTCCATCTGGGAGG...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGGCAGTGTCCCTGAATaGTGCACAGGTTTCACCGTG +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAGSVPE*CTGFTV
Trigger: CACGGTGAAACCTGTGCAGCATTCAGGGACACTGCC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTGATCCAGTCGGCAGGTaGCCCAGGAATCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: ALSLLMHTAASQVTQLCSDPVGR*PRNPTA
Trigger: GGCAGTGGGATTCCTGGGGCACCTGCCGACTGGATC...AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTTTGACTGTGACGGCCTaGCGGAGCCGTTCAAGACTC +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFALTVTA*RSRSRL
Trigger: GAGTCTTGAACGGCTCCGGCAGGCCGTCACAGTCAA...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTAGCGATGGTGTGGAGTaGTCGGTGGAGTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFASDGVE*SVESAS
Trigger: GGATGCAGACTCCACCGAGCACTCCACACCATCGCT...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACAACATGAGCCAGTCCTaGACAGTGATTTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDNMSQS*TVIWSF
Trigger: AAAACTCCAAATCACTGTGCAGGACTGGCTCATGTT...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGTTCTCGTCGGTTCATaGGCCGGACCCGGACGGCAA +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGVLVGS*AGPGRQ
Trigger: TTGCCGTCCGGGTCCGGCCCATGAACCGACGAGAAC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCCCTTGCCAGCTGCCTaGTCAGCCAGTGATGATATA +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHPLPAA*SASDDI
Trigger: TATATCATCACTGGCTGACCAGGCAGCTGGCAAGGG...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCACCATGCCACAGCTaGGTGGTACTGCACACAAGG +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPASPCHS*VVLHTR
Trigger: CCTTGTGTGCAGTACCACCCAGCTGTGGCATGGTGA...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCAGAGGAAGCCTCACTaGCTGCATCCAGGTCATGCT +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAQRKPH*LHPGHA
Trigger: AGCATGACCTGGATGCAGCCAGTGAGGCTTCCTCTG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTCTCTCTTCTGCCCACTaGGTCACCTTCTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFALSSAH*VTFCCA
Trigger: AGCGCAGCAGAAGGTGACCCAGTGGGCAGAAGAGAG...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATTGTACTGGGCATCCTTaGACTGTGGTGAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHCTGHP*TVVKAP
Trigger: AGGTGCCTTCACCACAGTCCAAGGATGCCCAGTACA...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATAATCGACCTCCCAGATaGAGCTGCCATTTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHNRPPR*SCHFQH
Trigger: GTGCTGGAAATGGCAGCTCCATCTGGGAGGTCGATT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCTGTCCAGCCCTCTTTaGAGTTTGGTGGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPALSSPL*SLVDLA
Trigger: TGCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTTCCATTCCAGGAGGTaGGATCCAGTCGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPFHSRR*DPVGRC
Trigger: GCACCTGCCGACTGGATCCCACCTCCTGGAATGGAA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTTTCACGCCGGATGCATaGGGGCCAACAAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAFTPDA*GPTSCS
Trigger: TGAGCAGCTTGTTGGCCCCCATGCATCCGGCGTGAA...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGGGCTGCCATGCTCCTTaGGCAGGATGGAGTTCACGC +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQGCHAP*AGWSSR
Trigger: GCGTGAACTCCATCCTGCCCAAGGAGCATGGCAGCC...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGAAAGGTCCGGTCGGCTaGAAGAGACATTATGAACAT +
Preference number: 4 (lower is better)
Translates to: GWCLPKVTRRTKTPSCGLKGPVG*KRHYEH
Trigger: ATGTTCATAATGTCTCTTCCAGCCGACCGGACCTTT...CAGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACTTCGAGGAGAATCCCTaGGTAAAGTTCCATAACATG +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDFEENP*VKFHNM
Trigger: CATGTTATGGAACTTTACCCAGGGATTCTCCTCGAA...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATATCATGCACAAGCGATaGTGTGGAGTGCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHIMHKR*CGVLGG
Trigger: TCCACCGAGCACTCCACACCATCGCTTGTGCATGAT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATTTCTCAGGGATGCTCTaGGATGATGGGCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHFSGML*DDGLPL
Trigger: CAAAGGGAGCCCATCATCCCAGAGCATCCCTGAGAA...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCAGGTCTTCAAGGATGTTaGTGGTGTGTTCTACCGTCA +
Preference number: 4 (lower is better)
Translates to: EVHGVDSPASGLRSSQAAGLQGC*WCVLPS
Trigger: TGACGGTAGAACACACCACCAACATCCTTGAAGACC...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGAGCTGGCTGGGGTGGTaGAGCCCATCGGAGACAGTC +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGSWLGW*SPSETV
Trigger: GACTGTCTCCGATGGGCTCCACCACCCCAGCCAGCT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTGCAGCTGGCTGGGGTaGTGGAGCCCATCGGAGACA +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGCSWLG*WSPSET
Trigger: TGTCTCCGATGGGCTCCACCACCCCAGCCAGCTGCA...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGGGAGGGGAAAGGAGGTaGCCCAGGAAGTGCACGGTG +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVGGERR*PRKCTV
Trigger: CACCGTGCACTTCCTGGGCCACCTCCTTTCCCCTCC...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGTTCCCGCTCATACATaGGCCGCTGCTCCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGVPAHT*AAAPLG
Trigger: CCCTAGAGGAGCAGCGGCTCATGTATGAGCGGGAAC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATTCTTCCTATTGGCACTaGGGTTTGCAGCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHSSYWH*GLQQGS
Trigger: AGATCCCTGCTGCAAACCTCAGTGCCAATAGGAAGA...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTAAGTGGCAGTGTCCCTaGATGCTGCACAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAKWQCP*MLHRFH
Trigger: GTGAAACCTGTGCAGCATTCAGGGACACTGCCACTT...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTCATCACTGTGCTTTATaGTGGGCAGGTAGAAAAACT +
Preference number: 4 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPHHCAL*WAGRKT
Trigger: AGTTTTTCTACCTGCCCATCATAAAGCACAGTGATG...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTCCAAGAGGCTGTGGCTaGAACCTCATCATCACTGTG +
Preference number: 4 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGPRGCG*NLIITV
Trigger: CACAGTGATGATGAGGTTTCAGCCACAGCCTCTTGG...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGGCTGCCATTGCTTCCTaGGGGTACAATGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQAAIAS*GYNAAR
Trigger: CCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGC...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502297.5
CDS-3UTR TCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTAATGGCCAGCTGGTCTaGGCTGTCACTAGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPNGQLV*AVTRRD
Trigger: GTCCCTTCTAGTGACAGCTCAGACCAGCTGGCCATT...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTCCAGGGTTATGTGCCTaGGGTGGAGGCATGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ALSLLMHTAASQVTQLCSPGLCA*GGGMLC
Trigger: GCAGAGCATGCCTCCACCTCAGGCACATAACCCTGG...AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACTTCTCAGTGTGCTTATaGAACAAAGGACAGAGAATG +
Preference number: 4 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDFSVCL*NKGQRM
Trigger: CATTCTCTGTCCTTTGTTTCATAAGCACACTGAGAA...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp ATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCAGGCCTTCATGGCCTCTaGCTGAGAGAGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: MAARGLVAKGIMAPNLQSGLHGL*LRELLS
Trigger: AGAGAGCAGCTCTCTCAGGCAGAGGCCATGAAGGCC...TGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGGCCTTCATGGCCTCTaGCTGAGAGAGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASGLHGL*LRELLS
Trigger: AGAGAGCAGCTCTCTCAGGCAGAGGCCATGAAGGCC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTACAGCTGGGTGGTACTaGACACAAGGGTGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFATAGWY*TQGCRS
Trigger: TGAACGGCACCCTTGTGTGCAGTACCACCCAGCTGT...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGGCTGCATCCAGGTCATaGTCTGGCGGGCCCGTTTCT +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGAASRS*SGGPVS
Trigger: AGAAACGGGCCCGCCAGAGCATGACCTGGATGCAGC...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGGAAGCCTCACTGGCTaGATCCAGGTCATGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASGSLTG*IQVMLW
Trigger: CCAGAGCATGACCTGGATGCAGCCAGTGAGGCTTCC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AGGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTCTGTCGGGGGAGAGCTaGTGGCGGAGTTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RWRGRWKTKEYSCEISQCLSGES*WRSCSS
Trigger: ACTGGAGCAACTCCGCCAGCAGCTCTCCCCCGACAG...ACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCACTGGGTCACCTTCTaGTGCGCTGTCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGHWVTF*CAVWLL
Trigger: CAGCAGCCAGACAGCGCAGCAGAAGGTGACCCAGTG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGCTGCTCTCGCAGTTTTaGCAGGCTTTGTCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGLLSQF*QALSEE
Trigger: CTCTTCCGACAAAGCCTGGCAAAACTGCGAGAGCAG...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCTGCTCTCGCAGTTTTaGCAGGCTTTGTCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPALLSQF*QALSEE
Trigger: CTCTTCCGACAAAGCCTGGCAAAACTGCGAGAGCAG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATTGGTCCACACTTGGGTaGTCTTTCCTTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHWSTLG*SFLSSS
Trigger: TGAGGAGGAAAGGAAAGAGCACCCAAGTGTGGACCA...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTGGCAGTGTCCCTGAATaGTGCACAGGTTTCACCGTG +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAGSVPE*CTGFTV
Trigger: CACGGTGAAACCTGTGCAGCATTCAGGGACACTGCC...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGTCAGCCCTACCCACTaGTCCACAAGCTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGVSPTH*STSWAS
Trigger: GGAAGCCCAGCTTGTGGAGCAGTGGGTAGGGCTGAC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGCCCCAGGAATCCCACTaGCTGGGGCTGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMPQESH*LGLAPA
Trigger: TGCTGGTGCCAGCCCCAGGCAGTGGGATTCCTGGGG...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGGATCCAGTCGGCAGGTaGCCCAGGAATCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLDPVGR*PRNPTA
Trigger: GGCAGTGGGATTCCTGGGGCACCTGCCGACTGGATC...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTGGGGGCCAACAAGCTaGTCATTGGCACTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPWGPTS*SLALRS
Trigger: TGACCTCAGTGCCAATGAGCAGCTTGTTGGCCCCCA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGGAGTTCACGCCGGATaGATGGGGGCCAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGGVHAG*MGANKL
Trigger: CAGCTTGTTGGCCCCCATGCATCCGGCGTGAACTCC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTAAAAACTGGCTGCCATaGTCCTTGGGCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGKNWLP*SLGRME
Trigger: CTCCATCCTGCCCAAGGAGCATGGCAGCCAGTTTTT...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTTCGTTTTCACTCCTTaGTGCCAGGAGAGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGFVFTP*CQESQR
Trigger: ACGCTGGCTCTCCTGGCAGCAAGGAGTGAAAACGAA...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGTTCGTTTTCACTCCTTaGTGCCAGGAGAGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGFVFTP*CQESQR
Trigger: ACGCTGGCTCTCCTGGCAGCAAGGAGTGAAAACGAA...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATAGAATGTTTTCCACCTaGAGCACGCCTCGAGTGTAC +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHRMFST*STPRVY
Trigger: GTACACTCGAGGCGTGCTGCAGGTGGAAAACATTCT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTAGGCTCCTCCGAATGTaGCGGGCTTTGGTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPRLLRM*RALVES
Trigger: ACTTTCCACCAAAGCCCGGCACATTCGGAGGAGCCT...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTCTACTGGCATGCTGCTaGCATTGCTTCCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGLLACC*HCFLRV
Trigger: TACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAG...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGTGCTCGGTGGAGTCTaGATCCTTCGTCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPVLGGV*ILRLNG
Trigger: GCCATTCAGACGAAGGATGCAGACTCCACCGAGCAC...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCAAGCGATGGTGTGGAGTaGTCGGTGGAGTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: MAARGLVAKGIMAPNLQSSDGVE*SVESAS
Trigger: GGATGCAGACTCCACCGAGCACTCCACACCATCGCT...TGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATAGTTTTTCTCAGGGATaGTCTGGGATGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHSFSQG*SGMMGS
Trigger: GGAGCCCATCATCCCAGAGCATCCCTGAGAAAAACT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTATACAACGGCTCATGCCTaGAATCCCAGTGCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LLACCCHCFLRVQCSQGYTTAHA*NPSALG
Trigger: TCCCAAGGCACTGGGATTGCAGGCATGAGCCGTTGT...ATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCAATCTGCATTTTAGTGTaGAGCCTTGTCTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: EVHGVDSPASGLRSSQAAICILV*SLVCLQ
Trigger: CTGGAGACAGACAAGGCTGCACACTAAAATGCAGAT...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCATGCCACAGCTGGGTaGTACTGCACACAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASHATAG*YCTQGC
Trigger: GCACCCTTGTGTGCAGTACCACCCAGCTGTGGCATG...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTTCACCATGCCACAGCTaGGTGGTACTGCACACAAGG +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFASPCHS*VVLHTR
Trigger: CCTTGTGTGCAGTACCACCCAGCTGTGGCATGGTGA...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTATCCAGGTCATGCTCTaGCGGGCCCGTTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAIQVML*RARFFF
Trigger: GAAAAAGAAACGGGCCCGCCAGAGCATGACCTGGAT...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTCAGAGGAAGCCTCACTaGCTGCATCCAGGTCATGCT +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAQRKPH*LHPGHA
Trigger: AGCATGACCTGGATGCAGCCAGTGAGGCTTCCTCTG...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACCTTTCCTCCTCACTTaGATAGCTGGTTCACTCACT +
Preference number: 4 (lower is better)
Translates to: WAEPRSRQLWSQDPSHCQPFLLT*IAGSLT
Trigger: AGTGAGTGAACCAGCTATCCAAGTGAGGAGGAAAGG...TTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCGCATCACTTCCACGTaGAGACGCCCTGCAACCTCC +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGRITST*RRPATS
Trigger: GGAGGTTGCAGGGCGTCTCCACGTGGAAGTGATGCG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTTTTCCAGCACACCGGTaGCCCCATACTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAFPAHR*PHTSMA
Trigger: GGCCATTGAAGTATGGGGCCACCGGTGTGCTGGAAA...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTAATCGACCTCCCAGATaGAGCTGCCATTTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPANRPPR*SCHFQH
Trigger: GTGCTGGAAATGGCAGCTCCATCTGGGAGGTCGATT...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTCTGTCCAGCCCTCTTTaGAGTTTGGTGGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPLSSPL*SLVDLA
Trigger: TGCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAG...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGCACTGCTCCACAAGCTaGGCTTCCCGCTCCACATCG +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGHCSTS*ASRSTS
Trigger: CGATGTGGAGCGGGAAGCCCAGCTTGTGGAGCAGTG...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTTCCATTCCAGGAGGTaGGATCCAGTCGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQFHSRR*DPVGRC
Trigger: GCACCTGCCGACTGGATCCCACCTCCTGGAATGGAA...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTGGAGGCATGCTCTCCTaGCTTAGAAGAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAGGMLS*LRRGLA
Trigger: AGCAAGGCCTCTTCTAAGCCAGGAGAGCATGCCTCC...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259711.11
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTGCAGAATCCCCTGGCTaGCTGGCTAATTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAAESPG*LANFAG
Trigger: CCCAGCAAAATTAGCCAGCCAGCCAGGGGATTCTGC...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCAGAATCCCCTGGCTaGCTGGCTAATTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPAESPG*LANFAG
Trigger: CCCAGCAAAATTAGCCAGCCAGCCAGGGGATTCTGC...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCAAACTTGGAATGCAGCTaGCTGGGGTGGTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: MAARGLVAKGIMAPNLQSNLECS*LGWWSP
Trigger: TGGGCTCCACCACCCCAGCCAGCTGCATTCCAAGTT...TGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTAACTTGGAATGCAGCTaGCTGGGGTGGTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASNLECS*LGWWSP
Trigger: TGGGCTCCACCACCCCAGCCAGCTGCATTCCAAGTT...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCACGGTCCAGGCAACTGTaGAGTCAGGACCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: MAARGLVAKGIMAPNLQSRSRQL*SQDPSH
Trigger: ATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCG...TGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCTTCCCCAAGGCACTTaGAAACCACTTCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPALPQGT*KPLLDQ
Trigger: CTGGTCAAGAAGTGGTTTTCAAGTGCCTTGGGGAAG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGTCATCCCCCACCTTaGTACCGGACATCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGCHPPP*YRTSPG
Trigger: CCCTGGAGATGTCCGGTATCAAGGTGGGGGATGACA...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGCTGCTCATTGGCACTaGGGTCATCCGCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAAAHWH*GHPHSN
Trigger: ATTTGAATGCGGATGACCTCAGTGCCAATGAGCAGC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTCCAAGAGGCTGTGGCTaGAACCTCATCATCACTGTG +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAPRGCG*NLIITV
Trigger: CACAGTGATGATGAGGTTTCAGCCACAGCCTCTTGG...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGGTACGTCTCCCCATCTaGTGTGCCTTCGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGVRLPI*CAFVFT
Trigger: AGTGAAAACGAAGGCACATCAGATGGGGAGACGTAC...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGTACGTCTCCCCATCTaGTGTGCCTTCGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAVRLPI*CAFVFT
Trigger: AGTGAAAACGAAGGCACATCAGATGGGGAGACGTAC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTGACGGTTAAGGCATaGGGAGTCTCTGATGTACAA +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHLTVKA*GVSDVQ
Trigger: TTGTACATCAGAGACTCCTCATGCCTTAACCGTCAG...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AGGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTCCAGGGTTATGTGCCTaGGGTGGAGGCATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RWRGRWKTKEYSCEISQCPGLCA*GGGMLS
Trigger: GGAGAGCATGCCTCCACCTCAGGCACATAACCCTGG...ACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502297.5
CDS-3UTR TCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTAATGGCCAGCTGGTCTaGGCTGTCACTAGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASNGQLV*AVTRRD
Trigger: GTCCCTTCTAGTGACAGCTCAGACCAGCTGGCCATT...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTGTTTGAGGACGGCCTaGAATCATGCACAAGCGATG +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPACLRTA*NHAQAM
Trigger: CATCGCTTGTGCATGATTTCAGGCCGTCCTCAAACA...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATAAGGGCCTCTGGGGTTaGCATACAGTTAGACATACT +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHKGLWG*HTVRHT
Trigger: AGTATGTCTAACTGTATGTCAACCCCAGAGGCCCTT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTAAACATGGTAAAGGGTaGACCATTGAACTTCATAGC +
Preference number: 4 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPKHGKG*TIELHS
Trigger: GCTATGAAGTTCAATGGTTCACCCTTTACCATGTTT...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGGAATAAGGCCCAGCTaGTCAGCATGGCCCATCATG +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASGIRPS*SAWPIM
Trigger: CATGATGGGCCATGCTGAGCAGCTGGGCCTTATTCC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTACTGCACACAAGGGTaGCGTTCACACAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPYCTQG*RSHRTL
Trigger: CAAGGTCCTGTGTGAACGGCACCCTTGTGTGCAGTA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGAGCTGCTGGCGGAGTTaGTCCAGTTCCCGCTCATAC +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGSCWRS*SSSRSY
Trigger: GTATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTTCATCCCTCTCTTCTaGCCACTGGGTCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPFIPLF*PLGHLL
Trigger: CAGAAGGTGACCCAGTGGGCAGAAGAGAGGGATGAA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTCTGCTCTCGCAGTTTTaGCAGGCTTTGTCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPLLSQF*QALSEE
Trigger: CTCTTCCGACAAAGCCTGGCAAAACTGCGAGAGCAG...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATTTAGCTTTAACCAGCTaGTCTCGCAGTTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHLALTS*SRSFAR
Trigger: CCTGGCAAAACTGCGAGAGCAGCTGGTTAAAGCTAA...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATATTGGCACTGAGGTTTaGAGCAGGGATCTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHIGTEV*SRDLKS
Trigger: ACTCTTCAGATCCCTGCTGCAAACCTCAGTGCCAAT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGGGCAGTGTCCCTGAATaGTGCACAGGTTTCACCGTG +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQGSVPE*CTGFTV
Trigger: CACGGTGAAACCTGTGCAGCATTCAGGGACACTGCC...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGGTCAGCCCTACCCACTaGTCCACAAGCTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLVSPTH*STSWAS
Trigger: GGAAGCCCAGCTTGTGGAGCAGTGGGTAGGGCTGAC...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTAAAAACTGGCTGCCATaGTCCTTGGGCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAKNWLP*SLGRME
Trigger: CTCCATCCTGCCCAAGGAGCATGGCAGCCAGTTTTT...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTTCGTTTTCACTCCTTaGTGCCAGGAGAGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPFVFTP*CQESQR
Trigger: ACGCTGGCTCTCCTGGCAGCAAGGAGTGAAAACGAA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGTTGACTGTGACGGCCTaGCGGAGCCGTTCAAGACTC +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVLTVTA*RSRSRL
Trigger: GAGTCTTGAACGGCTCCGGCAGGCCGTCACAGTCAA...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGGCTTTGGTGGAAAGTaGTTCTTTGACTGTGACGGC +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAGFGGK*FFDCDG
Trigger: GCCGTCACAGTCAAAGAAGCACTTTCCACCAAAGCC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGCAGCCAGGGTTATGTaGCTGAGGTGGAGGCATGCT +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGAARVM*LRWRHA
Trigger: AGCATGCCTCCACCTCAGGCACATAACCCTGGCTGC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259711.11
CDS-3UTR GCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGAGCGATGGTGTGGAGTaGTCGGTGGAGTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGSDGVE*SVESAS
Trigger: GGATGCAGACTCCACCGAGCACTCCACACCATCGCT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGACGGCCTGAAATCATaGACAAGCGATGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPDGLKS*TSDGVE
Trigger: CTCCACACCATCGCTTGTGCATGATTTCAGGCCGTC...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp TGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAAATCTGCATTTTAGTGTaGAGCCTTGTCTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: WAEPRSRQLWSQDPSHCQICILV*SLVCLQ
Trigger: CTGGAGACAGACAAGGCTGCACACTAAAATGCAGAT...TTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCGGCAACTTTTACCTTaGTATCCGACATGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHRQLLP*YPTCWL
Trigger: CAGCCAACATGTCGGATACCAAGGTAAAAGTTGCCG...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCAGCATGGCCCATCATaGAAAAGGATTTTCCCGAAC +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHQHGPS*KRIFPN
Trigger: GTTCGGGAAAATCCTTTTCCATGATGGGCCATGCTG...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTCCCAGCTGCTCAGCATaGCCCATCATGGAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPPSCSA*PIMEKD
Trigger: ATCCTTTTCCATGATGGGCCATGCTGAGCAGCTGGG...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTATGTTGAACACAGCATaGGAGCGGCTGCTTTCTTCG +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAMLNTA*ERLLSS
Trigger: CGAAGAAAGCAGCCGCTCCCATGCTGTGTTCAACAT...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATATAGTTGTCTGCGGCTaGGCTGATTGTGGCTATCAT +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHIVVCG*ADCGYH
Trigger: ATGATAGCCACAATCAGCCCAGCCGCAGACAACTAT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGCATGCCACAGCTGGGTaGTACTGCACACAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGHATAG*YCTQGC
Trigger: GCACCCTTGTGTGCAGTACCACCCAGCTGTGGCATG...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCTCTCTTCTGCCCACTaGGTCACCTTCTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGLSSAH*VTFCCA
Trigger: AGCGCAGCAGAAGGTGACCCAGTGGGCAGAAGAGAG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTCTCCAGCTTCTCAATaGTCCACACTTGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGSPASQ*STLGCS
Trigger: AGAGCACCCAAGTGTGGACCATTGAGAAGCTGGAGA...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGCAACCTCCCCCTGCTaGCTGATGATAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGATSPC*LMIGTA
Trigger: TGCAGTCCCTATCATCAGCCAGCAGGGGGAGGTTGC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATGGCTCCCACTTTCACTaGAATTCTCCGAAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHGSHFH*NSPKSH
Trigger: ATGACTCTTCGGAGAATTCCAGTGAAAGTGGGAGCC...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGGAGTTTGGTGGACCTaGCAGTTACACAGCCGATGG +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASGVWWT*QLHSRW
Trigger: CCATCGGCTGTGTAACTGCCAGGTCCACCAAACTCC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCTCTTTGGAGTTTGGTaGACCTGGCAGTTACACAGC +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPALFGVW*TWQLHS
Trigger: GCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCCCTCTTTGGAGTTTaGTGGACCTGGCAGTTACAC +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPALFGV*WTWQLH
Trigger: GTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGC...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGCACTGCTCCACAAGCTaGGCTTCCCGCTCCACATCG +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLHCSTS*ASRSTS
Trigger: CGATGTGGAGCGGGAAGCCCAGCTTGTGGAGCAGTG...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTTTCACGCCGGATGCATaGGGGCCAACAAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ALSLLMHTAASQVTQLCSFTPDA*GPTSCS
Trigger: TGAGCAGCTTGTTGGCCCCCATGCATCCGGCGTGAA...AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp ATGTCCACATGCAGCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACGCTCCTTGGGCAGGATaGAGTTCACGCCGGATGCAT +
Preference number: 4 (lower is better)
Translates to: MSTCSTQLVNAHCCFTGDAPWAG*SSRRMH
Trigger: ATGCATCCGGCGTGAACTCCATCCTGCCCAAGGAGC...GTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGCTGCATGTGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp ATGCAGCAGCCAATTCTGCAGGCCAGAGTTAAACTACTGGAGAGATATGACAGGGGCTGCCATGCTCCTTaGGCAGGATGGAGTTCACGC +
Preference number: 4 (lower is better)
Translates to: MQQPILQARVKLLERYDRGCHAP*AGWSSR
Trigger: GCGTGAACTCCATCCTGCCCAAGGAGCATGGCAGCC...CCTGTCATATCTCTCCAGTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATAATCCCAAGAGGCTGTaGCTGAAACCTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHNPKRL*LKPHHH
Trigger: GTGATGATGAGGTTTCAGCCACAGCCTCTTGGGATT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTCATCCTTCGTCTGAATaGCCAGCTGGTCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAHPSSE*PAGLSC
Trigger: ACAGCTCAGACCAGCTGGCCATTCAGACGAAGGATG...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTAACTTGGAATGCAGCTaGCTGGGGTGGTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGNLECS*LGWWSP
Trigger: TGGGCTCCACCACCCCAGCCAGCTGCATTCCAAGTT...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTCCTCAGAGTCCTCCTaGCTTAGAAGAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPSSESS*LRRGLA
Trigger: AGCAAGGCCTCTTCTAAGCCAGGAGGACTCTGAGGA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGGGGTGCAGGACCGTTTaGTTCCCTTCCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLGCRTV*FPSIST
Trigger: GGTGGAGATGGAAGGGAATCAAACGGTCCTGCACCC...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTCTTCCCCAAGGCACTTaGAAACCACTTCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPLPQGT*KPLLDQ
Trigger: CTGGTCAAGAAGTGGTTTTCAAGTGCCTTGGGGAAG...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCAGCCAAGTGAGGACTaGATCTCGATAAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAQPSED*ISIRHK
Trigger: TTTGTGCCTTATCGAGATTCAGTCCTCACTTGGCTG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGTCATCCCCCACCTTaGTACCGGACATCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLCHPPP*YRTSPG
Trigger: CCCTGGAGATGTCCGGTATCAAGGTGGGGGATGACA...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTAGCTTTTTGACTCGGTaGATGATTTCCCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFASFLTR*MISPLL
Trigger: CAGCAGCGGGGAAATCATTCACCGAGTCAAAAAGCT...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGGCCAGTGCTCCATCTaGAATGAACTCCAGAAATTC +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAGQCSI*NELQKF
Trigger: GAATTTCTGGAGTTCATTTCAGATGGAGCACTGGCC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGTTCTTGTCTTAGCATaGAGAGAATCGACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAVLVLA*RESTSQ
Trigger: CTGGGAGGTCGATTCTCTTCATGCTAAGACAAGAAC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATAGATGCCTCCTGTGTTaGCATCTTTTGCCTGATGAA +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHRCLLC*HLLPDE
Trigger: TTCATCAGGCAAAAGATGTCAACACAGGAGGCATCT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTAAGTGGCAGTGTCCCTaGATGCTGCACAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASKWQCP*MLHRFH
Trigger: GTGAAACCTGTGCAGCATTCAGGGACACTGCCACTT...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTACAGCCGATGGATACTaGCAGGATGGCTTCAACCAT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPTADGY*QDGFNH
Trigger: ATGGTTGAAGCCATCCTGTCAGTATCCATCGGCTGT...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTTTAATGAGTGCATCTaGCCACCTCTCCCTTACGCA +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAFNECI*PPLPYA
Trigger: TGCGTAAGGGAGAGGTGGTCAGATGCACTCATTAAA...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCCAAGAGGCTGTGGCTaGAACCTCATCATCACTGTG +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASPRGCG*NLIITV
Trigger: CACAGTGATGATGAGGTTTCAGCCACAGCCTCTTGG...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGGTGACCCTATTCAAGTaGACAGAATCATGCACCGAG +
Preference number: 4 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGVTLFK*TESCTE
Trigger: CTCGGTGCATGATTCTGTTCACTTGAATAGGGTCAC...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGGCAGGGTGGCTGAGTTaGACTGTGGTTTTCACAATT +
Preference number: 4 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGAGWLS*TVVFTI
Trigger: AATTGTGAAAACCACAGTTCAACTCAGCCACCCTGC...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGTCTTCAAACTCTGCGTaGAACTCTGTTTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: GWCLPKVTRRTKTPSCGLSSNSA*NSVCCK
Trigger: TTTACAACAAACAGAGTTTCACGCAGAGTTTGAAGA...CAGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp TGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACTGGAAGAGACATTATaGACATTTGGTGTACTGAGG +
Preference number: 4 (lower is better)
Translates to: WAEPRSRQLWSQDPSHCQLEETL*TFGVLR
Trigger: CCTCAGTACACCAAATGTTCATAATGTCTCTTCCAG...TTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTCAGGCATTAGGGGCTTaGAAAACTTTGGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAQALGA*KTLVAE
Trigger: CTCAGCCACCAAAGTTTTTCAAGCCCCTAATGCCTG...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCTGCATCCTTCGTCTaGATGGCCAGCTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGSASFV*MASWSE
Trigger: CTCAGACCAGCTGGCCATTCAGACGAAGGATGCAGA...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTTGTTTGAGGACGGCCTaGAATCATGCACAAGCGATG +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFACLRTA*NHAQAM
Trigger: CATCGCTTGTGCATGATTTCAGGCCGTCCTCAAACA...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGGGTGCTTGCCCAAGGTaGCCAGGCGAACAAAGACGC +
Preference number: 4 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMGACPR*PGEQRR
Trigger: GCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACC...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp ATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCAGTTGATTCACCCAAGTaGCAAAGTGCCGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: MAARGLVAKGIMAPNLQSVDSPK*QSAASP
Trigger: GGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAAC...TGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGGAATAAGGCCCAGCTaGTCAGCATGGCCCATCATG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGGIRPS*SAWPIM
Trigger: CATGATGGGCCATGCTGAGCAGCTGGGCCTTATTCC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATTTTCAGTCGCTCTCCTaGAGCTCCTGTTTTAGATAC +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHFQSLS*SSCFRY
Trigger: GTATCTAAAACAGGAGCTGCAGGAGAGCGACTGAAA...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTACAGCTGGGTGGTACTaGACACAAGGGTGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGTAGWY*TQGCRS
Trigger: TGAACGGCACCCTTGTGTGCAGTACCACCCAGCTGT...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGACAGCTGGGTGGTACTaGACACAAGGGTGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGTAGWY*TQGCRS
Trigger: TGAACGGCACCCTTGTGTGCAGTACCACCCAGCTGT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTTATGGCTGCATCCAGGTCATaGTCTGGCGGGCCCGTTTCT +
Preference number: 4 (lower is better)
Translates to: GAGGRPKNIAVRFLSVLMAASRS*SGGPVS
Trigger: AGAAACGGGCCCGCCAGAGCATGACCTGGATGCAGC...CATAAGCACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTTCATACATGAGCCGCTaGTCCTCTAGGGCACTTCTC +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASSYMSR*SSRALL
Trigger: GAGAAGTGCCCTAGAGGAGCAGCGGCTCATGTATGA...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTATTGGCACTGAGGTTTaGAGCAGGGATCTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAIGTEV*SRDLKS
Trigger: ACTCTTCAGATCCCTGCTGCAAACCTCAGTGCCAAT...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTATTGGTCCACACTTGGGTaGTCTTTCCTTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LLACCCHCFLRVQCSQGYWSTLG*SFLSSS
Trigger: TGAGGAGGAAAGGAAAGAGCACCCAAGTGTGGACCA...ATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTTGGTCCACACTTGGGTaGTCTTTCCTTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAWSTLG*SFLSSS
Trigger: TGAGGAGGAAAGGAAAGAGCACCCAAGTGTGGACCA...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTAGTGTCCCTGAATGCTaGACAGGTTTCACCGTGACT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPSVPEC*TGFTVT
Trigger: AGTCACGGTGAAACCTGTGCAGCATTCAGGGACACT...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGGATCCAGTCGGCAGGTaGCCCAGGAATCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: RVICIRSSPANMVKGEPLDPVGR*PRNPTA
Trigger: GGCAGTGGGATTCCTGGGGCACCTGCCGACTGGATC...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTGGGGGCCAACAAGCTaGTCATTGGCACTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGWGPTS*SLALRS
Trigger: TGACCTCAGTGCCAATGAGCAGCTTGTTGGCCCCCA...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTATAGAATGTTTTCCACCTaGAGCACGCCTCGAGTGTAC +
Preference number: 4 (lower is better)
Translates to: LLACCCHCFLRVQCSQGYRMFST*STPRVY
Trigger: GTACACTCGAGGCGTGCTGCAGGTGGAAAACATTCT...ATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTAGAATGTTTTCCACCTaGAGCACGCCTCGAGTGTAC +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFARMFST*STPRVY
Trigger: GTACACTCGAGGCGTGCTGCAGGTGGAAAACATTCT...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTTGACTGTGACGGCCTaGCGGAGCCGTTCAAGACTC +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLLTVTA*RSRSRL
Trigger: GAGTCTTGAACGGCTCCGGCAGGCCGTCACAGTCAA...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTGGCTTTGGTGGAAAGTaGTTCTTTGACTGTGACGGC +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAGFGGK*FFDCDG
Trigger: GCCGTCACAGTCAAAGAAGCACTTTCCACCAAAGCC...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTAGGCTCCTCCGAATGTaGCGGGCTTTGGTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: ALSLLMHTAASQVTQLCSRLLRM*RALVES
Trigger: ACTTTCCACCAAAGCCCGGCACATTCGGAGGAGCCT...AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGAGGCTCCTCCGAATGTaGCGGGCTTTGGTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVRLLRM*RALVES
Trigger: ACTTTCCACCAAAGCCCGGCACATTCGGAGGAGCCT...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGCTATCCTTTTCTTATaGTCCTCTTTTACAGGCATT +
Preference number: 4 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPAILFL*SSFTGI
Trigger: AATGCCTGTAAAAGAGGAGCATAAGAAAAGGATAGC...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp ATGCAGCAGCCAATTCTGCAGGCCAGAGTTAAACTACTGGAGAGATATGACAGGGCAGCCAGGGTTATGTaGCTGAGGTGGAGGCATGCT +
Preference number: 4 (lower is better)
Translates to: MQQPILQARVKLLERYDRAARVM*LRWRHA
Trigger: AGCATGCCTCCACCTCAGGCACATAACCCTGGCTGC...CCTGTCATATCTCTCCAGTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp TGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAAAACATGAGCCAGTCCTaGACAGTGATTTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: WAEPRSRQLWSQDPSHCQNMSQS*TVIWSF
Trigger: AAAACTCCAAATCACTGTGCAGGACTGGCTCATGTT...TTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTTCTCTAACTTGGAATaGAGCTGGCTGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQFSNLE*SWLGWW
Trigger: CCACCACCCCAGCCAGCTGCATTCCAAGTTAGAGAA...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCAGAACCCAAAAGGCTaGCTCTGGAATTATTACCTG +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHQNPKG*LWNYYL
Trigger: CAGGTAATAATTCCAGAGGCAGCCTTTTGGGTTCTG...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTTCCCAAAACAGACTTaGTCTCCGACAGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAFPKQT*SPTETA
Trigger: AGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAA...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTGCAGCAGCCAATTCTaGAGGCCAGAGTTAAACTAC +
Preference number: 4 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGCSSQF*RPELNY
Trigger: GTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCA...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTCAAATCACCTTTATCTaGATTTTAGTGTGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPQITFI*ILVCSL
Trigger: AAGGCTGCACACTAAAATGCAGATAAAGGTGATTTG...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTTTATGGCACCAAACTTaGAGTCAAACATACATGTTC +
Preference number: 4 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPLWHQT*SQTYMF
Trigger: GAACATGTATGTTTGACTGCAAGTTTGGTGCCATAA...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTATAGTTGTCTGCGGCTaGGCTGATTGTGGCTATCAT +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAIVVCG*ADCGYH
Trigger: ATGATAGCCACAATCAGCCCAGCCGCAGACAACTAT...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCATCGGGGGAGAGCTGCTaGCGGAGTTGCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSSGESC*RSCSSS
Trigger: GGAACTGGAGCAACTCCGCCAGCAGCTCTCCCCCGA...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGAGGGCCGCTACTCTGTaGCTGCCTGTCGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQRAATL*LPVGGE
Trigger: CTCTCCCCCGACAGGCAGCCACAGAGTAGCGGCCCT...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp ATGCAGCAGCCAATTCTGCAGGCCAGAGTTAAACTACTGGAGAGATATGACAGGCTCTCTTCTGCCCACTaGGTCACCTTCTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: MQQPILQARVKLLERYDRLSSAH*VTFCCA
Trigger: AGCGCAGCAGAAGGTGACCCAGTGGGCAGAAGAGAG...CCTGTCATATCTCTCCAGTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCCTTTCCTCCTCACTTaGATAGCTGGTTCACTCACT +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAPFLLT*IAGSLT
Trigger: AGTGAGTGAACCAGCTATCCAAGTGAGGAGGAAAGG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTAAGGTCACTGTGTACTaGGCATCCTTGGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPKVTVY*ASLDCG
Trigger: ACCACAGTCCAAGGATGCCCAGTACACAGTGACCTT...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTGGCCCCATACTTCAATaGCCAGTGCTCCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAGPILQ*PVLHLK
Trigger: TTTCAGATGGAGCACTGGCCATTGAAGTATGGGGCC...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATGTCCACATGCAGCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACTTTCCAGCACACCGGTaGCCCCATACTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: MSTCSTQLVNAHCCFTGDFPAHR*PHTSMA
Trigger: GGCCATTGAAGTATGGGGCCACCGGTGTGCTGGAAA...GTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGCTGCATGTGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTTCCAGCACACCGGTaGCCCCATACTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGFPAHR*PHTSMA
Trigger: GGCCATTGAAGTATGGGGCCACCGGTGTGCTGGAAA...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCAGTTACACAGCCGATaGATACTGACAGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAQLHSR*ILTGWL
Trigger: AAGCCATCCTGTCAGTATCCATCGGCTGTGTAACTG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGGCCCTCTTTGGAGTTTaGTGGACCTGGCAGTTACAC +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQALFGV*WTWQLH
Trigger: GTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGC...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGCCCTCTTTGGAGTTTaGTGGACCTGGCAGTTACAC +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASALFGV*WTWQLH
Trigger: GTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCTGTCCAGCCCTCTTTaGAGTTTGGTGGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGLSSPL*SLVDLA
Trigger: TGCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTGCCACTGCTCCACAAGCTaGGCTTCCCGCTCCACATCG +
Preference number: 4 (lower is better)
Translates to: QSSSHVCYCVLLACCCHCHCSTS*ASRSTS
Trigger: CGATGTGGAGCGGGAAGCCCAGCTTGTGGAGCAGTG...GCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTTCCATTCCAGGAGGTaGGATCCAGTCGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLFHSRR*DPVGRC
Trigger: GCACCTGCCGACTGGATCCCACCTCCTGGAATGGAA...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGGCTCCTTGGGCAGGATaGAGTTCACGCCGGATGCAT +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLAPWAG*SSRRMH
Trigger: ATGCATCCGGCGTGAACTCCATCCTGCCCAAGGAGC...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATAAAGGTCCGGTCGGCTaGAAGAGACATTATGAACAT +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHKGPVG*KRHYEH
Trigger: ATGTTCATAATGTCTCTTCCAGCCGACCGGACCTTT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTTCAGACATGTCCAACTaGTTCTCTGGCCAACCCTTG +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFASDMSN*FSGQPL
Trigger: CAAGGGTTGGCCAGAGAACCAGTTGGACATGTCTGA...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGTTATGTGCCTGAGGTaGAGGCATGCTCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGVMCLR*RHALLA
Trigger: AGCCAGGAGAGCATGCCTCCACCTCAGGCACATAAC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259711.11
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGTGTGGAGTGCTCGGTaGAGTCTGCATCCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGVWSAR*SLHPSS
Trigger: AGACGAAGGATGCAGACTCCACCGAGCACTCCACAC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGGCACAAGCGATGGTGTaGAGTGCTCGGTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLAQAMV*SARWSL
Trigger: CAGACTCCACCGAGCACTCCACACCATCGCTTGTGC...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTTTCTCAGGGATGCTCTaGGATGATGGGCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASFSGML*DDGLPL
Trigger: CAAAGGGAGCCCATCATCCCAGAGCATCCCTGAGAA...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGGCAGAATCCCCTGGCTaGCTGGCTAATTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGAESPG*LANFAG
Trigger: CCCAGCAAAATTAGCCAGCCAGCCAGGGGATTCTGC...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAACTACCGTCACCTCCCTaGGGCAGAATCCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRELPSPP*GRIPWL
Trigger: CAGCCAGGGGATTCTGCCCCAGGGAGGTGACGGTAG...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGGGTCTTCAAGGATGTTaGTGGTGTGTTCTACCGTCA +
Preference number: 4 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGGLQGC*WCVLPS
Trigger: TGACGGTAGAACACACCACCAACATCCTTGAAGACC...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp ATGTCCACATGCAGCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACGCAATCCCAGTGCCTTaGGAGGCTGGGGCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: MSTCSTQLVNAHCCFTGDAIPVP*EAGAKE
Trigger: TTCTTTTGCCCCAGCCTCCCAAGGCACTGGGATTGC...GTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGCTGCATGTGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCTTCCTATTGGCACTaGGGTTTGCAGCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQSSYWH*GLQQGS
Trigger: AGATCCCTGCTGCAAACCTCAGTGCCAATAGGAAGA...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTTCTTCCTATTGGCACTaGGGTTTGCAGCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASSSYWH*GLQQGS
Trigger: AGATCCCTGCTGCAAACCTCAGTGCCAATAGGAAGA...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTCATTCGCCACCCCGATaGGGTTGTGATTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: ALSLLMHTAASQVTQLCSHSPPR*GCDFLG
Trigger: CCCAAGAAAATCACAACCTCATCGGGGTGGCGAATG...AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp CTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTATGGCCAGTGCTCCATCTaGAATGAACTCCAGAAATTC +
Preference number: 4 (lower is better)
Translates to: LLACCCHCFLRVQCSQGYGQCSI*NELQKF
Trigger: GAATTTCTGGAGTTCATTTCAGATGGAGCACTGGCC...ATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGAAGTGGCAGTGTCCCTaGATGCTGCACAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGKWQCP*MLHRFH
Trigger: GTGAAACCTGTGCAGCATTCAGGGACACTGCCACTT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTTTTAATGAGTGCATCTaGCCACCTCTCCCTTACGCA +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAFNECI*PPLPYA
Trigger: TGCGTAAGGGAGAGGTGGTCAGATGCACTCATTAAA...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATTTTCATTCTGTGGTGTaGCCCTATTCAAGTGAACAG +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHFHSVV*PYSSEQ
Trigger: CTGTTCACTTGAATAGGGTCACACCACAGAATGAAA...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCAGGGTGGCTGAGTTaGACTGTGGTTTTCACAATT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPAGWLS*TVVFTI
Trigger: AATTGTGAAAACCACAGTTCAACTCAGCCACCCTGC...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGTACGTCTCCCCATCTaGTGTGCCTTCGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASVRLPI*CAFVFT
Trigger: AGTGAAAACGAAGGCACATCAGATGGGGAGACGTAC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGGAACATTTGGTGTACTaGGGCTCCTCCGAATGTGCC +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGEHLVY*GSSECA
Trigger: GGCACATTCGGAGGAGCCTCAGTACACCAAATGTTC...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCAAAAAACTTTGGTGGCTaGGGAGAGAATGCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: EVHGVDSPASGLRSSQAAKNFGG*GENALK
Trigger: TTTTAAAGCATTCTCTCCTCAGCCACCAAAGTTTTT...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp TGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAATTCTCAGTGTGCTTATaGAACAAAGGACAGAGAATG +
Preference number: 4 (lower is better)
Translates to: WAEPRSRQLWSQDPSHCQFSVCL*NKGQRM
Trigger: CATTCTCTGTCCTTTGTTTCATAAGCACACTGAGAA...TTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp CCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGCCACTTTAATTTTATCCGACATGTTGGCTaGGCTCGCCCGGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: PFIHMWGLMQFTSRHFNFIRHVG*ARPAAR
Trigger: GCGAGCGGCCGGGCGAGCGCAGCCAACATGTCGGAT...AAAATTAAAGTGGCGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS-3UTR GCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTATTTGCTTTTACCCTTaGCAGCTGCCTGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASICFYP*QLPGQP
Trigger: TGGCTGACCAGGCAGCTGGCAAGGGTAAAAGCAAAT...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCTCTTCATAGTTGTCTaGGGCTGGGCTGATTGTGGC +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGLFIVV*GWADCG
Trigger: GCCACAATCAGCCCAGCCGCAGACAACTATGAAGAG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTTCTCGGATCACTTTTaGGTTGGGGTCCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPFSDHF*VGVLIH
Trigger: GTGAATGAGGACCCCAACGCAAAAGTGATCCGAGAA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTATCTTGAGAGGTATCTaGACCCACCCTGGTGTGATC +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASILRGI*THPGVI
Trigger: GATCACACCAGGGTGGGTGCAGATACCTCTCAAGAT...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATGTTCACACAGGACCTTaGATTTTCTTTTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHVHTGP*IFFWSE
Trigger: CTCACTCCAAAAGAAAATGCAAGGTCCTGTGTGAAC...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTCATCCCTCTCTTCTaGCCACTGGGTCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGFIPLF*PLGHLL
Trigger: CAGAAGGTGACCCAGTGGGCAGAAGAGAGGGATGAA...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTCTGCTCTCGCAGTTTTaGCAGGCTTTGTCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: ALSLLMHTAASQVTQLCSLLSQF*QALSEE
Trigger: CTCTTCCGACAAAGCCTGGCAAAACTGCGAGAGCAG...AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTTAGCTTTAACCAGCTaGTCTCGCAGTTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPLALTS*SRSFAR
Trigger: CCTGGCAAAACTGCGAGAGCAGCTGGTTAAAGCTAA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTATTGGCACTGAGGTTTaGAGCAGGGATCTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAIGTEV*SRDLKS
Trigger: ACTCTTCAGATCCCTGCTGCAAACCTCAGTGCCAAT...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTGGTTCACTCACTATTaGACCTCTCTTCCTATTGGC +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAWFTHY*TSLPIG
Trigger: GCCAATAGGAAGAGAGGTGCAATAGTGAGTGAACCA...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATTCCGTAGAGTCTCTTTaGCTCAGGAACTTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHSVESL*LRNFFL
Trigger: AAGGAAAAAGTTCCTGAGGCAAAGAGACTCTACGGA...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTATTCTGCACCTCCCAGATGGAGCTaGCATTTCCAGCACACCGGT +
Preference number: 4 (lower is better)
Translates to: LVNAHCCFTGDTTLLYSAPPRWS*HFQHTG
Trigger: ACCGGTGTGCTGGAAATGGCAGCTCCATCTGGGAGG...TGCAGAATAGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGAGTGTCCCTGAATGCTaGACAGGTTTCACCGTGACT +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQSVPEC*TGFTVT
Trigger: AGTCACGGTGAAACCTGTGCAGCATTCAGGGACACT...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp ATGCAGCAGCCAATTCTGCAGGCCAGAGTTAAACTACTGGAGAGATATGACAGGGGCAGTGTCCCTGAATaGTGCACAGGTTTCACCGTG +
Preference number: 4 (lower is better)
Translates to: MQQPILQARVKLLERYDRGSVPE*CTGFTV
Trigger: CACGGTGAAACCTGTGCAGCATTCAGGGACACTGCC...CCTGTCATATCTCTCCAGTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGCCCCAGGAATCCCACTaGCTGGGGCTGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQPQESH*LGLAPA
Trigger: TGCTGGTGCCAGCCCCAGGCAGTGGGATTCCTGGGG...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGAAAAACTGGCTGCCATaGTCCTTGGGCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGKNWLP*SLGRME
Trigger: CTCCATCCTGCCCAAGGAGCATGGCAGCCAGTTTTT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGAGGCTCCTCCGAATGTaGCGGGCTTTGGTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLRLLRM*RALVES
Trigger: ACTTTCCACCAAAGCCCGGCACATTCGGAGGAGCCT...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTACTGGCATGCTGCTaGCATTGCTTCCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVLLACC*HCFLRV
Trigger: TACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAG...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502297.5
CDS-3UTR GCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTGTGTTCTACTGGCATaGTGCTGCCATTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQCVLLA*CCHCFL
Trigger: CAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACA...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502297.5
CDS-3UTR GCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTAGTTTTTCTCAGGGATaGTCTGGGATGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASSFSQG*SGMMGS
Trigger: GGAGCCCATCATCCCAGAGCATCCCTGAGAAAAACT...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCATCGGAGACAGTCTTaGCGCCTGTTTTATTTGGTA +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAHRRQS*RLFYLV
Trigger: TACCAAATAAAACAGGCGGCAAGACTGTCTCCGATG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCAGAACCCAAAAGGCTaGCTCTGGAATTATTACCTG +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAQNPKG*LWNYYL
Trigger: CAGGTAATAATTCCAGAGGCAGCCTTTTGGGTTCTG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTTTCCCAAAACAGACTTaGTCTCCGACAGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAFPKQT*SPTETA
Trigger: AGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAA...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGAGAGATCGCCCAAGTTaGTTTGTAACGAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGRDRPS*FVTKSS
Trigger: ACTGGACTTCGTTACAAAGCAACTTGGGCGATCTCT...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCAAAGGCAAATACCTTaGGAGGTTTCCTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAQRQIP*EVSFLP
Trigger: AGGGAGAAAGGAAACCTCCCAAGGTATTTGCCTTTG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGCAAAGGCAAATACCTTaGGAGGTTTCCTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGQRQIP*EVSFLP
Trigger: AGGGAGAAAGGAAACCTCCCAAGGTATTTGCCTTTG...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTACTGTCTACTCCCTTTaGGGTCTAAAAGATCCCGAA +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPATVYSL*GLKDPE
Trigger: TTCGGGATCTTTTAGACCCCAAAGGGAGTAGACAGT...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCCCTTGCCAGCTGCCTaGTCAGCCAGTGATGATATA +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVPLPAA*SASDDI
Trigger: TATATCATCACTGGCTGACCAGGCAGCTGGCAAGGG...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGCCCTTGCCAGCTGCCTaGTCAGCCAGTGATGATATA +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGPLPAA*SASDDI
Trigger: TATATCATCACTGGCTGACCAGGCAGCTGGCAAGGG...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTGGATCACTTTTGCGTTaGGGTCCTCATTCACAACAG +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAGSLLR*GPHSQQ
Trigger: CTGTTGTGAATGAGGACCCCAACGCAAAAGTGATCC...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGCAGAGGAAGCCTCACTaGCTGCATCCAGGTCATGCT +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLQRKPH*LHPGHA
Trigger: AGCATGACCTGGATGCAGCCAGTGAGGCTTCCTCTG...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAATTCATAGTTATAGTCTaGTTCAGAGGAAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: WAEPRSRQLWSQDPSHCQFIVIV*FRGSLT
Trigger: AGTGAGGCTTCCTCTGAACCAGACTATAACTATGAA...TTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTCCTCACTTGGATAGCTaGTTCACTCACTATTGCACC +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPPHLDS*FTHYCT
Trigger: GGTGCAATAGTGAGTGAACCAGCTATCCAAGTGAGG...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTCCTCACTTGGATAGCTaGTTCACTCACTATTGCACC +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAPHLDS*FTHYCT
Trigger: GGTGCAATAGTGAGTGAACCAGCTATCCAAGTGAGG...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTCCTTTCCTCCTCACTTaGATAGCTGGTTCACTCACT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPPFLLT*IAGSLT
Trigger: AGTGAGTGAACCAGCTATCCAAGTGAGGAGGAAAGG...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTATTCTGCAGCAACCTCCCCCTGCTaGCTGATGATAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: LVNAHCCFTGDTTLLYSAATSPC*LMIGTA
Trigger: TGCAGTCCCTATCATCAGCCAGCAGGGGGAGGTTGC...TGCAGAATAGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTGTACTGGGCATCCTTaGACTGTGGTGAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGCTGHP*TVVKAP
Trigger: AGGTGCCTTCACCACAGTCCAAGGATGCCCAGTACA...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGAAGGTCACTGTGTACTaGGCATCCTTGGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQKVTVY*ASLDCG
Trigger: ACCACAGTCCAAGGATGCCCAGTACACAGTGACCTT...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGGCCCCATACTTCAATaGCCAGTGCTCCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASGPILQ*PVLHLK
Trigger: TTTCAGATGGAGCACTGGCCATTGAAGTATGGGGCC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATGTCCACATGCAGCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACAATCGACCTCCCAGATaGAGCTGCCATTTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: MSTCSTQLVNAHCCFTGDNRPPR*SCHFQH
Trigger: GTGCTGGAAATGGCAGCTCCATCTGGGAGGTCGATT...GTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGCTGCATGTGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGAATCGACCTCCCAGATaGAGCTGCCATTTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVNRPPR*SCHFQH
Trigger: GTGCTGGAAATGGCAGCTCCATCTGGGAGGTCGATT...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTCAGTTACACAGCCGATaGATACTGACAGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAQLHSR*ILTGWL
Trigger: AAGCCATCCTGTCAGTATCCATCGGCTGTGTAACTG...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGCCCTCTTTGGAGTTTaGTGGACCTGGCAGTTACAC +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGALFGV*WTWQLH
Trigger: GTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTGCTTCCATTCCAGGAGGTaGGATCCAGTCGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QSSSHVCYCVLLACCCHCFHSRR*DPVGRC
Trigger: GCACCTGCCGACTGGATCCCACCTCCTGGAATGGAA...GCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGTTCACGCCGGATGCATaGGGGCCAACAAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMFTPDA*GPTSCS
Trigger: TGAGCAGCTTGTTGGCCCCCATGCATCCGGCGTGAA...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGGGCTGCCATGCTCCTTaGGCAGGATGGAGTTCACGC +
Preference number: 4 (lower is better)
Translates to: RVICIRSSPANMVKGEPLGCHAP*AGWSSR
Trigger: GCGTGAACTCCATCCTGCCCAAGGAGCATGGCAGCC...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGACATTATGAACATTTaGTGTACTGAGGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPADIMNI*CTEAPP
Trigger: CGGAGGAGCCTCAGTACACCAAATGTTCATAATGTC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGTCCAACTGGTTCTCTaGCCAACCCTTGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASVQLVL*PTLVIF
Trigger: GAAGATGACAAGGGTTGGCCAGAGAACCAGTTGGAC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCAGACATGTCCAACTaGTTCTCTGGCCAACCCTTG +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQSDMSN*FSGQPL
Trigger: CAAGGGTTGGCCAGAGAACCAGTTGGACATGTCTGA...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGCAGACAGGGTGGCATTaGAGGCACTGTGGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGQTGWH*RHCGKS
Trigger: ACTTTTCCCACAGTGCCTCCAATGCCACCCTGTCTG...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCAGACAGGGTGGCATTaGAGGCACTGTGGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVQTGWH*RHCGKS
Trigger: ACTTTTCCCACAGTGCCTCCAATGCCACCCTGTCTG...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCATCCTTCGTCTGAATaGCCAGCTGGTCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVHPSSE*PAGLSC
Trigger: ACAGCTCAGACCAGCTGGCCATTCAGACGAAGGATG...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTCTCAGGGATGCTCTaGGATGATGGGCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGFSGML*DDGLPL
Trigger: CAAAGGGAGCCCATCATCCCAGAGCATCCCTGAGAA...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTCTTCAAGGATGTTGGTaGTGTGTTCTACCGTCACCT +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFALQGCW*CVLPSP
Trigger: AGGTGACGGTAGAACACACCACCAACATCCTTGAAG...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACAGCTGGCTGGGGTGGTaGAGCCCATCGGAGACAGTC +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNSWLGW*SPSETV
Trigger: GACTGTCTCCGATGGGCTCCACCACCCCAGCCAGCT...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCTGCAGCTGGCTGGGGTaGTGGAGCCCATCGGAGACA +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCCSWLG*WSPSET
Trigger: TGTCTCCGATGGGCTCCACCACCCCAGCCAGCTGCA...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTATCAAGCATTTACCTCCTaGCTTAGAAGAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LLACCCHCFLRVQCSQGYQAFTS*LRRGLA
Trigger: AGCAAGGCCTCTTCTAAGCCAGGAGGTAAATGCTTG...ATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGTCCTCAGAGTCCTCCTaGCTTAGAAGAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVSSESS*LRRGLA
Trigger: AGCAAGGCCTCTTCTAAGCCAGGAGGACTCTGAGGA...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGTGCCGCTTCTCCCACTaGGGAGGGGAAAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQCRFSH*GGERRW
Trigger: CCACCTCCTTTCCCCTCCCCAGTGGGAGAAGCGGCA...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGTGTCAAGTCAGCAGGTaGAGGGGCAGGTGGAAGACC +
Preference number: 4 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMCQVSR*RGRWKT
Trigger: GGTCTTCCACCTGCCCCTCCACCTGCTGACTTGACA...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGGGTGCAGGACCGTTTaGTTCCCTTCCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREGCRTV*FPSIST
Trigger: GGTGGAGATGGAAGGGAATCAAACGGTCCTGCACCC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCACAGCCAAGTGAGGACTaGATCTCGATAAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: MAARGLVAKGIMAPNLQSQPSED*ISIRHK
Trigger: TTTGTGCCTTATCGAGATTCAGTCCTCACTTGGCTG...TGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATGGTCTGCATTCAGATTaGCTAAGTAGCATTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHGLHSD*LSSICH
Trigger: ATGACAAATGCTACTTAGTCAATCTGAATGCAGACC...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTCACTTGGTAATCGGTaGGTTTGCTCATTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPSLGNR*VCSFPQ
Trigger: CTGAGGAAATGAGCAAACTCACCGATTACCAAGTGA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ATGTCCACATGCAGCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACTCTTCCTATTGGCACTaGGGTTTGCAGCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: MSTCSTQLVNAHCCFTGDSSYWH*GLQQGS
Trigger: AGATCCCTGCTGCAAACCTCAGTGCCAATAGGAAGA...GTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGCTGCATGTGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGCATTCGCCACCCCGATaGGGTTGTGATTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLHSPPR*GCDFLG
Trigger: CCCAAGAAAATCACAACCTCATCGGGGTGGCGAATG...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTATAGGGACTGCATACTaGAGTTTCACATCACAGAAG +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAIGTAY*SFTSQK
Trigger: CTTCTGTGATGTGAAACTTCAGTATGCAGTCCCTAT...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTAGCTTTTTGACTCGGTaGATGATTTCCCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGSFLTR*MISPLL
Trigger: CAGCAGCGGGGAAATCATTCACCGAGTCAAAAAGCT...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCATCCTTGGACTGTGGTaGAGGCACCTCGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LNPPPGNMTEMVPELTIFILGLW*RHLGVH
Trigger: GTGGACCCCGAGGTGCCTTCACCACAGTCCAAGGAT...GAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGGCACAGGTTTCACCGTaGCTTGTACTCTACGGGAAT +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGAQVSP*LVLYGN
Trigger: ATTCCCGTAGAGTACAAGTCACGGTGAAACCTGTGC...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTGCACAGGTTTCACCGTaGCTTGTACTCTACGGGAAT +
Preference number: 4 (lower is better)
Translates to: ALSLLMHTAASQVTQLCSAQVSP*LVLYGN
Trigger: ATTCCCGTAGAGTACAAGTCACGGTGAAACCTGTGC...AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp ATGCAGCAGCCAATTCTGCAGGCCAGAGTTAAACTACTGGAGAGATATGACAGGAAGTGGCAGTGTCCCTaGATGCTGCACAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: MQQPILQARVKLLERYDRKWQCP*MLHRFH
Trigger: GTGAAACCTGTGCAGCATTCAGGGACACTGCCACTT...CCTGTCATATCTCTCCAGTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTACAGCCGATGGATACTaGCAGGATGGCTTCAACCAT +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGTADGY*QDGFNH
Trigger: ATGGTTGAAGCCATCCTGTCAGTATCCATCGGCTGT...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTCATCACTGTGCTTTATaGTGGGCAGGTAGAAAAACT +
Preference number: 4 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGHHCAL*WAGRKT
Trigger: AGTTTTTCTACCTGCCCATCATAAAGCACAGTGATG...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGTGACCCTATTCAAGTaGACAGAATCATGCACCGAG +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASVTLFK*TESCTE
Trigger: CTCGGTGCATGATTCTGTTCACTTGAATAGGGTCAC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTTTCATTCTGTGGTGTaGCCCTATTCAAGTGAACAG +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAFHSVV*PYSSEQ
Trigger: CTGTTCACTTGAATAGGGTCACACCACAGAATGAAA...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTGTACGTCTCCCCATCTaGTGTGCCTTCGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: ALSLLMHTAASQVTQLCSVRLPI*CAFVFT
Trigger: AGTGAAAACGAAGGCACATCAGATGGGGAGACGTAC...AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGCAGGCATTAGGGGCTTaGAAAACTTTGGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGQALGA*KTLVAE
Trigger: CTCAGCCACCAAAGTTTTTCAAGCCCCTAATGCCTG...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCAGCTGCCATTGCTTCCTaGGGGTACAATGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSAAIAS*GYNAAR
Trigger: CCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGC...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGAATGGCCAGCTGGTCTaGGCTGTCACTAGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMNGQLV*AVTRRD
Trigger: GTCCCTTCTAGTGACAGCTCAGACCAGCTGGCCATT...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTTATGAATGGCCAGCTGGTCTaGGCTGTCACTAGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: GAGGRPKNIAVRFLSVLMNGQLV*AVTRRD
Trigger: GTCCCTTCTAGTGACAGCTCAGACCAGCTGGCCATT...CATAAGCACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTGTCAACTCTTTGTTTaGGGACGGCCTGAAATCATG +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPCQLFV*GRPEIM
Trigger: CATGATTTCAGGCCGTCCTCAAACAAAGAGTTGACA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGTTAGACATACTCATTaGCAGCACAGAACCCAAAAG +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAVRHTH*QHRTQK
Trigger: CTTTTGGGTTCTGTGCTGTCAATGAGTATGTCTAAC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTATGACTCTGCATGCTTaGGAAAGAGGAATTCGAGAA +
Preference number: 4 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGMTLHA*ERGIRE
Trigger: TTCTCGAATTCCTCTTTCTCAAGCATGCAGAGTCAT...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACGGTGCTTGCCCAAGGTaGCCAGGCGAACAAAGACGC +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNGACPR*PGEQRR
Trigger: GCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACC...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGATTTGCTTTTACCCTTaGCAGCTGCCTGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGICFYP*QLPGQP
Trigger: TGGCTGACCAGGCAGCTGGCAAGGGTAAAAGCAAAT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTATTTGCTTTTACCCTTaGCAGCTGCCTGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGICFYP*QLPGQP
Trigger: TGGCTGACCAGGCAGCTGGCAAGGGTAAAAGCAAAT...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGGCCTTCATGGCCTCTaGCTGAGAGAGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREGLHGL*LRELLS
Trigger: AGAGAGCAGCTCTCTCAGGCAGAGGCCATGAAGGCC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTACTGCACACAAGGGTaGCGTTCACACAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLYCTQG*RSHRTL
Trigger: CAAGGTCCTGTGTGAACGGCACCCTTGTGTGCAGTA...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGCTGTCGGGGGAGAGCTaGTGGCGGAGTTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQLSGES*WRSCSS
Trigger: ACTGGAGCAACTCCGCCAGCAGCTCTCCCCCGACAG...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGCCGCTACTCTGTGGCTaGCTGTCGGGGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLPLLCG*LSGESC
Trigger: GCAGCTCTCCCCCGACAGGCAGCCACAGAGTAGCGG...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCTGCGCTGTCTGGCTaGTGTAGGCCAGGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLAALSG*CRPGGQ
Trigger: CTGACCGCCTGGCCTACAGCAGCCAGACAGCGCAGC...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGCTGCGCTGTCTGGCTaGTGTAGGCCAGGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPAALSG*CRPGGQ
Trigger: CTGACCGCCTGGCCTACAGCAGCCAGACAGCGCAGC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp TTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCCACTGGGTCACCTTCTaGTGCGCTGTCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LNPPPGNMTEMVPELTIFHWVTF*CAVWLL
Trigger: CAGCAGCCAGACAGCGCAGCAGAAGGTGACCCAGTG...GAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGCACTGGGTCACCTTCTaGTGCGCTGTCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQHWVTF*CAVWLL
Trigger: CAGCAGCCAGACAGCGCAGCAGAAGGTGACCCAGTG...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTTGGTTCACTCACTATTaGACCTCTCTTCCTATTGGC +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAWFTHY*TSLPIG
Trigger: GCCAATAGGAAGAGAGGTGCAATAGTGAGTGAACCA...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGGTCCACACTTGGGTaGTCTTTCCTTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGWSTLG*SFLSSS
Trigger: TGAGGAGGAAAGGAAAGAGCACCCAAGTGTGGACCA...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTAGTGTCCCTGAATGCTaGACAGGTTTCACCGTGACT +
Preference number: 4 (lower is better)
Translates to: ALSLLMHTAASQVTQLCSSVPEC*TGFTVT
Trigger: AGTCACGGTGAAACCTGTGCAGCATTCAGGGACACT...AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACGTCAGCCCTACCCACTaGTCCACAAGCTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNVSPTH*STSWAS
Trigger: GGAAGCCCAGCTTGTGGAGCAGTGGGTAGGGCTGAC...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCCCCCAGGAATCCCACTaGCTGGGGCTGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPPQESH*LGLAPA
Trigger: TGCTGGTGCCAGCCCCAGGCAGTGGGATTCCTGGGG...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTGCTGGGGGCCAACAAGCTaGTCATTGGCACTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: QSSSHVCYCVLLACCCHCWGPTS*SLALRS
Trigger: TGACCTCAGTGCCAATGAGCAGCTTGTTGGCCCCCA...GCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGTGGGGGCCAACAAGCTaGTCATTGGCACTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMWGPTS*SLALRS
Trigger: TGACCTCAGTGCCAATGAGCAGCTTGTTGGCCCCCA...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp CTTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTGGAGTTCACGCCGGATaGATGGGGGCCAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: LKPTTRQYDRNGSGTYNLGVHAG*MGANKL
Trigger: CAGCTTGTTGGCCCCCATGCATCCGGCGTGAACTCC...AAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACGGAGTTCACGCCGGATaGATGGGGGCCAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNGVHAG*MGANKL
Trigger: CAGCTTGTTGGCCCCCATGCATCCGGCGTGAACTCC...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCATTGACTGTGACGGCCTaGCGGAGCCGTTCAAGACTC +
Preference number: 4 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSLTVTA*RSRSRL
Trigger: GAGTCTTGAACGGCTCCGGCAGGCCGTCACAGTCAA...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATTCTTCTTCTCACGTTTaGTATTGTGTTCTACTGGCA +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHSSSHV*YCVLLA
Trigger: TGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGA...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259711.11
CDS-3UTR GCA 90 bp AGGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGACGGCCTGAAATCATaGACAAGCGATGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: RWRGRWKTKEYSCEISQCDGLKS*TSDGVE
Trigger: CTCCACACCATCGCTTGTGCATGATTTCAGGCCGTC...ACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTCATCGGAGACAGTCTTaGCGCCTGTTTTATTTGGTA +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAHRRQS*RLFYLV
Trigger: TACCAAATAAAACAGGCGGCAAGACTGTCTCCGATG...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTCTGTGGGCTCATCTTTaGTGTCACAAACAACTGGAT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPLWAHL*CHKQLD
Trigger: ATCCAGTTGTTTGTGACAGCAAAGATGAGCCCACAG...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTCAGGTGACACAACTCTaGTCTATTCTGCATAGTACA +
Preference number: 4 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGQVTQL*SILHST
Trigger: TGTACTATGCAGAATAGAGCAGAGTTGTGTCACCTG...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGCTGCAAAGAGGGATTTaGAAGCTCATTCTTAGGCAA +
Preference number: 4 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGLQRGI*KLILRQ
Trigger: TTGCCTAAGAATGAGCTTGCAAATCCCTCTTTGCAG...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp CTTTGCCAACCATCCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGCTCACTGGAGCCTCCTaGCTCAGTCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LCQPSIYSYVGSDAIHLTLTGAS*LSLLSS
Trigger: GCTACTCAGGAGACTGAGGCAGGAGGCTCCAGTGAG...CGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGGATGGTTGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS-3UTR CCA 90 bp CCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGCCACTTTAATTTTTGGTATCCGACATGTTaGCTGCGCTCGCCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: PFIHMWGLMQFTSRHFNFWYPTC*LRSPGR
Trigger: GCGGCCGGGCGAGCGCAGCCAACATGTCGGATACCA...AAAATTAAAGTGGCGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS-3UTR CCA 90 bp ACACACATTCCTTTCTTATACCCCATTTGTTGGATGAATGCCCCACAGGATTTTGTTCTCGTCGGTTCATaGGCCGGACCCGGACGGCAA +
Preference number: 4 (lower is better)
Translates to: THIPFLYPICWMNAPQDFVLVGS*AGPGRQ
Trigger: TTGCCGTCCGGGTCCGGCCCATGAACCGACGAGAAC...AAAATCCTGTGGGGCATTCATCCAACAAATGGGGTATAAGAAAGGAATGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS-3UTR CCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGATGTTGAACACAGCATaGGAGCGGCTGCTTTCTTCG +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGMLNTA*ERLLSS
Trigger: CGAAGAAAGCAGCCGCTCCCATGCTGTGTTCAACAT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATTCATTCACAACAGCATaGTTCACAATCCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHSFTTA*FTILLA
Trigger: AGCCAAAAGGATTGTGAACCATGCTGTTGTGAATGA...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATTATCTGCACCCACCCTaGTGTGATCCTTTAAATAAT +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHYLHPP*CDPLNN
Trigger: ATTATTTAAAGGATCACACCAGGGTGGGTGCAGATA...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTCCTTGCATTTTCTTTTaGAGTGAGAGTGACGTCTCC +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAPCIFF*SESDVS
Trigger: GGAGACGTCACTCTCACTCCAAAAGAAAATGCAAGG...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGATCCAGGTCATGCTCTaGCGGGCCCGTTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLIQVML*RARFFF
Trigger: GAAAAAGAAACGGGCCCGCCAGAGCATGACCTGGAT...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATTTCATAGTTATAGTCTaGTTCAGAGGAAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHFIVIV*FRGSLT
Trigger: AGTGAGGCTTCCTCTGAACCAGACTATAACTATGAA...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATGCAGCAGCCAATTCTGCAGGCCAGAGTTAAACTACTGGAGAGATATGACAGGTGTACTGGGCATCCTTaGACTGTGGTGAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: MQQPILQARVKLLERYDRCTGHP*TVVKAP
Trigger: AGGTGCCTTCACCACAGTCCAAGGATGCCCAGTACA...CCTGTCATATCTCTCCAGTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGAAGGTCACTGTGTACTaGGCATCCTTGGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGKVTVY*ASLDCG
Trigger: ACCACAGTCCAAGGATGCCCAGTACACAGTGACCTT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCCACTGCTCCACAAGCTaGGCTTCCCGCTCCACATCG +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCHCSTS*ASRSTS
Trigger: CGATGTGGAGCGGGAAGCCCAGCTTGTGGAGCAGTG...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTATCGAGGAAGAGAACTaGTATGTGGGTTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPIEEEN*YVGFHS
Trigger: GGAATGGAAACCCACATACCAGTTCTCTTCCTCGAT...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTATCGAGGAAGAGAACTaGTATGTGGGTTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAIEEEN*YVGFHS
Trigger: GGAATGGAAACCCACATACCAGTTCTCTTCCTCGAT...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTAATCCCAAGAGGCTGTaGCTGAAACCTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASNPKRL*LKPHHH
Trigger: GTGATGATGAGGTTTCAGCCACAGCCTCTTGGGATT...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATAATCCTTTCATTCTGTaGTGTGACCCTATTCAAGTG +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHNPFIL*CDPIQV
Trigger: CACTTGAATAGGGTCACACCACAGAATGAAAGGATT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTATGACATTATGAACATTTaGTGTACTGAGGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: LLACCCHCFLRVQCSQGYDIMNI*CTEAPP
Trigger: CGGAGGAGCCTCAGTACACCAAATGTTCATAATGTC...ATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp CTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTATAAAGGTCCGGTCGGCTaGAAGAGACATTATGAACAT +
Preference number: 4 (lower is better)
Translates to: LLACCCHCFLRVQCSQGYKGPVG*KRHYEH
Trigger: ATGTTCATAATGTCTCTTCCAGCCGACCGGACCTTT...ATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp ATGTCCACATGCAGCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACGTCCAACTGGTTCTCTaGCCAACCCTTGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: MSTCSTQLVNAHCCFTGDVQLVL*PTLVIF
Trigger: GAAGATGACAAGGGTTGGCCAGAGAACCAGTTGGAC...GTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGCTGCATGTGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTGAAAAACTTTGGTaGCTGAGGAGAGAATGCTTT +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHLEKLW*LRRECF
Trigger: AAAGCATTCTCTCCTCAGCCACCAAAGTTTTTCAAG...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGGGCTTGAAAAACTTTaGTGGCTGAGGAGAGAATGC +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASGLEKL*WLRREC
Trigger: GCATTCTCTCCTCAGCCACCAAAGTTTTTCAAGCCC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGCACAAGCGATGGTGTaGAGTGCTCGGTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREAQAMV*SARWSL
Trigger: CAGACTCCACCGAGCACTCCACACCATCGCTTGTGC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTATGATGGGCTCCCTTTaGCTAAGGCACTGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASMMGSL*LRHCFP
Trigger: AGGAAAACAGTGCCTTAGCCAAAGGGAGCCCATCAT...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTTCAAGGATGTTGGTaGTGTGTTCTACCGTCACCT +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASLQGCW*CVLPSP
Trigger: AGGTGACGGTAGAACACACCACCAACATCCTTGAAG...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCTGCAGCTGGCTGGGGTaGTGGAGCCCATCGGAGACA +
Preference number: 4 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFCSWLG*WSPSET
Trigger: TGTCTCCGATGGGCTCCACCACCCCAGCCAGCTGCA...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCCAAAAGGCTGCCTCTaGAATTATTACCTGGTCATT +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAPKGCL*NYYLVI
Trigger: AATGACCAGGTAATAATTCCAGAGGCAGCCTTTTGG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTCCTCAGAGTCCTCCTaGCTTAGAAGAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLSSESS*LRRGLA
Trigger: AGCAAGGCCTCTTCTAAGCCAGGAGGACTCTGAGGA...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGGAGGTTGTGCCTCCCTaGTCATTCTCTAACTTGGAA +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQEVVPP*SFSNLE
Trigger: TTCCAAGTTAGAGAATGACCAGGGAGGCACAACCTC...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGTGTCAAGTCAGCAGGTaGAGGGGCAGGTGGAAGACC +
Preference number: 4 (lower is better)
Translates to: RVICIRSSPANMVKGEPLCQVSR*RGRWKT
Trigger: GGTCTTCCACCTGCCCCTCCACCTGCTGACTTGACA...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR CAA 72 bp AGTGATGACCGTGCATGTCCACATGCAGCACTCAGCTaGTTAATGCACACTGCTGCTTCACAGGTGACACAA +
Preference number: 4 (lower is better)
Translates to: SDDRACPHAALS*LMHTAASQVTQ
Trigger: TTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGCTGCATGTGGACATGCACGGTCATCACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR CAA 72 bp CGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATaGCTTCCTGAGGGTACAATGCAGCCAGGGTTATGT +
Preference number: 4 (lower is better)
Translates to: RLLLCSTGMLLP*LPEGTMQPGLC
Trigger: ACATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AGGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTCTTCCCCAAGGCACTTaGAAACCACTTCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: RWRGRWKTKEYSCEISQCLPQGT*KPLLDQ
Trigger: CTGGTCAAGAAGTGGTTTTCAAGTGCCTTGGGGAAG...ACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATAACTTTAAAGGTCTGTaGCTCATTTTGCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHNFKGL*LILLQR
Trigger: TCTTTGGAGCAAAATGAGTCACAGACCTTTAAAGTT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTAGTGACAGCTAGTTaGGATAAACCATCTACATAT +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHLVTAS*DKPSTY
Trigger: ATATGTAGATGGTTTATCTCAACTAGCTGTCACTAG...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCAGCCAAGTGAGGACTaGATCTCGATAAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGQPSED*ISIRHK
Trigger: TTTGTGCCTTATCGAGATTCAGTCCTCACTTGGCTG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGAAAAGCTGGATATCTTaGGAGGTATCTGCACCCACC +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGKSWIS*EVSAPT
Trigger: GGTGGGTGCAGATACCTCTCAAGATATCCAGCTTTT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGGTTCCCGCTCATACATaGGCCGCTGCTCCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQVPAHT*AAAPLG
Trigger: CCCTAGAGGAGCAGCGGCTCATGTATGAGCGGGAAC...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCACTTGGTAATCGGTaGGTTTGCTCATTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQSLGNR*VCSFPQ
Trigger: CTGAGGAAATGAGCAAACTCACCGATTACCAAGTGA...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGCATTCGCCACCCCGATaGGGTTGTGATTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMHSPPR*GCDFLG
Trigger: CCCAAGAAAATCACAACCTCATCGGGGTGGCGAATG...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp GCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTGTTCTTGTCTTAGCATaGAGAGAATCGACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ALSLLMHTAASQVTQLCSVLVLA*RESTSQ
Trigger: CTGGGAGGTCGATTCTCTTCATGCTAAGACAAGAAC...AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGGTTCTTGTCTTAGCATaGAGAGAATCGACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGVLVLA*RESTSQ
Trigger: CTGGGAGGTCGATTCTCTTCATGCTAAGACAAGAAC...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGTTCTTGTCTTAGCATaGAGAGAATCGACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGVLVLA*RESTSQ
Trigger: CTGGGAGGTCGATTCTCTTCATGCTAAGACAAGAAC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTAGATGCCTCCTGTGTTaGCATCTTTTGCCTGATGAA +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASRCLLC*HLLPDE
Trigger: TTCATCAGGCAAAAGATGTCAACACAGGAGGCATCT...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGGCACAGGTTTCACCGTaGCTTGTACTCTACGGGAAT +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLAQVSP*LVLYGN
Trigger: ATTCCCGTAGAGTACAAGTCACGGTGAAACCTGTGC...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AGGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTACAGCCGATGGATACTaGCAGGATGGCTTCAACCAT +
Preference number: 4 (lower is better)
Translates to: RWRGRWKTKEYSCEISQCTADGY*QDGFNH
Trigger: ATGGTTGAAGCCATCCTGTCAGTATCCATCGGCTGT...ACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTTATGCCAAGAGGCTGTGGCTaGAACCTCATCATCACTGTG +
Preference number: 4 (lower is better)
Translates to: GAGGRPKNIAVRFLSVLMPRGCG*NLIITV
Trigger: CACAGTGATGATGAGGTTTCAGCCACAGCCTCTTGG...CATAAGCACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGTGACCCTATTCAAGTaGACAGAATCATGCACCGAG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGVTLFK*TESCTE
Trigger: CTCGGTGCATGATTCTGTTCACTTGAATAGGGTCAC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ATGTCCACATGCAGCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACGTGACCCTATTCAAGTaGACAGAATCATGCACCGAG +
Preference number: 4 (lower is better)
Translates to: MSTCSTQLVNAHCCFTGDVTLFK*TESCTE
Trigger: CTCGGTGCATGATTCTGTTCACTTGAATAGGGTCAC...GTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGCTGCATGTGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGGTGACCCTATTCAAGTaGACAGAATCATGCACCGAG +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGVTLFK*TESCTE
Trigger: CTCGGTGCATGATTCTGTTCACTTGAATAGGGTCAC...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTCTGGAAGAGACATTATaGACATTTGGTGTACTGAGG +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFALEETL*TFGVLR
Trigger: CCTCAGTACACCAAATGTTCATAATGTCTCTTCCAG...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTGGCATGAGGAGTCTCTaGTGTACAACCTTCTTTATT +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAGMRSL*CTTFFI
Trigger: AATAAAGAAGGTTGTACATCAGAGACTCCTCATGCC...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGCAGGCATTAGGGGCTTaGAAAACTTTGGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLQALGA*KTLVAE
Trigger: CTCAGCCACCAAAGTTTTTCAAGCCCCTAATGCCTG...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGCCAGGGTTATGTGCCTaGGGTGGAGGCATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQPGLCA*GGGMLS
Trigger: GGAGAGCATGCCTCCACCTCAGGCACATAACCCTGG...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259711.11
CDS-3UTR TCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTTGGCATTGTAAACACTaGAGTCAGCAAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASWHCKH*SQQTPQ
Trigger: CTGTGGAGTTTGCTGACTTCAGTGTTTACAATGCCA...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGTTTGAGGACGGCCTaGAATCATGCACAAGCGATG +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLCLRTA*NHAQAM
Trigger: CATCGCTTGTGCATGATTTCAGGCCGTCCTCAAACA...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTTGTCAACTCTTTGTTTaGGGACGGCCTGAAATCATG +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASCQLFV*GRPEIM
Trigger: CATGATTTCAGGCCGTCCTCAAACAAAGAGTTGACA...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCATGTCAACTCTTTGTTTaGGGACGGCCTGAAATCATG +
Preference number: 4 (lower is better)
Translates to: MAARGLVAKGIMAPNLQSCQLFV*GRPEIM
Trigger: CATGATTTCAGGCCGTCCTCAAACAAAGAGTTGACA...TGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTAAGGGCCTCTGGGGTTaGCATACAGTTAGACATACT +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGKGLWG*HTVRHT
Trigger: AGTATGTCTAACTGTATGTCAACCCCAGAGGCCCTT...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGATAAGGCACAAATTTaGTTTTACCCTTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPDKAQI*FYPCQL
Trigger: CAGCTGGCAAGGGTAAAAGCAAATTTGTGCCTTATC...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTCTCGGATCACTTTTaGGTTGGGGTCCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGFSDHF*VGVLIH
Trigger: GTGAATGAGGACCCCAACGCAAAAGTGATCCGAGAA...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGATCTTGAGAGGTATCTaGACCCACCCTGGTGTGATC +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLILRGI*THPGVI
Trigger: GATCACACCAGGGTGGGTGCAGATACCTCTCAAGAT...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGTTCACACAGGACCTTaGATTTTCTTTTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPVHTGP*IFFWSE
Trigger: CTCACTCCAAAAGAAAATGCAAGGTCCTGTGTGAAC...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTTAGCTTTAACCAGCTaGTCTCGCAGTTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGLALTS*SRSFAR
Trigger: CCTGGCAAAACTGCGAGAGCAGCTGGTTAAAGCTAA...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTATTCCGTAGAGTCTCTTTaGCTCAGGAACTTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LLACCCHCFLRVQCSQGYSVESL*LRNFFL
Trigger: AAGGAAAAAGTTCCTGAGGCAAAGAGACTCTACGGA...ATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp CTTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCCTGCAACCTCCCCCTaGTGGCTGATGATAGGGACT +
Preference number: 4 (lower is better)
Translates to: LKPTTRQYDRNGSGTYNLPATSP*WLMIGT
Trigger: AGTCCCTATCATCAGCCAGCAGGGGGAGGTTGCAGG...AAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACCCTGCAACCTCCCCCTaGTGGCTGATGATAGGGACT +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNPATSP*WLMIGT
Trigger: AGTCCCTATCATCAGCCAGCAGGGGGAGGTTGCAGG...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTCATTCCACCTGTCATaGAGTGTTCTTGTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPSFHLS*SVLVLA
Trigger: TGCTAAGACAAGAACACTGCATGACAGGTGGAATGA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGAGTGTCCCTGAATGCTaGACAGGTTTCACCGTGACT +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLSVPEC*TGFTVT
Trigger: AGTCACGGTGAAACCTGTGCAGCATTCAGGGACACT...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AGGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTAGTGTCCCTGAATGCTaGACAGGTTTCACCGTGACT +
Preference number: 4 (lower is better)
Translates to: RWRGRWKTKEYSCEISQCSVPEC*TGFTVT
Trigger: AGTCACGGTGAAACCTGTGCAGCATTCAGGGACACT...ACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAATGGGGGCCAACAAGCTaGTCATTGGCACTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREWGPTS*SLALRS
Trigger: TGACCTCAGTGCCAATGAGCAGCTTGTTGGCCCCCA...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGAAAAACTGGCTGCCATaGTCCTTGGGCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMKNWLP*SLGRME
Trigger: CTCCATCCTGCCCAAGGAGCATGGCAGCCAGTTTTT...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGCTCTATCTCCTCAGTTaGCTTTGGTATATTGGATAC +
Preference number: 4 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGLYLLS*LWYIGY
Trigger: GTATCCAATATACCAAAGGCAACTGAGGAGATAGAG...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCTCCCCATCTGATGTaGCTTCGTTTTCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGSPHLM*LRFHSL
Trigger: CAAGGAGTGAAAACGAAGGCACATCAGATGGGGAGA...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGTCTCCCCATCTGATGTaGCTTCGTTTTCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVSPHLM*LRFHSL
Trigger: CAAGGAGTGAAAACGAAGGCACATCAGATGGGGAGA...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp ATGCAGCAGCCAATTCTGCAGGCCAGAGTTAAACTACTGGAGAGATATGACAGGGGCTTTGGTGGAAAGTaGTTCTTTGACTGTGACGGC +
Preference number: 4 (lower is better)
Translates to: MQQPILQARVKLLERYDRGFGGK*FFDCDG
Trigger: GCCGTCACAGTCAAAGAAGCACTTTCCACCAAAGCC...CCTGTCATATCTCTCCAGTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACGCAGCCAGGGTTATGTaGCTGAGGTGGAGGCATGCT +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNAARVM*LRWRHA
Trigger: AGCATGCCTCCACCTCAGGCACATAACCCTGGCTGC...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502297.5
CDS-3UTR GCA 90 bp GGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTTATGGACGGCCTGAAATCATaGACAAGCGATGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: GAGGRPKNIAVRFLSVLMDGLKS*TSDGVE
Trigger: CTCCACACCATCGCTTGTGCATGATTTCAGGCCGTC...CATAAGCACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTAACATGAGCCAGTCCTaGACAGTGATTTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPNMSQS*TVIWSF
Trigger: AAAACTCCAAATCACTGTGCAGGACTGGCTCATGTT...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTaGTGTCACAAACAACTGGAT +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASLWAHL*CHKQLD
Trigger: ATCCAGTTGTTTGTGACAGCAAAGATGAGCCCACAG...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATATGAAATATGGTAGATaGTACCAGAACACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHMKYGR*YQNTLG
Trigger: TCCCAAAGTGTTCTGGTAGCATCTACCATATTTCAT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCAAGAGATCGCCCAAGTTaGTTTGTAACGAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: MAARGLVAKGIMAPNLQSRDRPS*FVTKSS
Trigger: ACTGGACTTCGTTACAAAGCAACTTGGGCGATCTCT...TGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCGGCAACTTTTACCTTaGTATCCGACATGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGRQLLP*YPTCWL
Trigger: CAGCCAACATGTCGGATACCAAGGTAAAAGTTGCCG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTATAGTTGTCTGCGGCTaGGCTGATTGTGGCTATCAT +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGIVVCG*ADCGYH
Trigger: ATGATAGCCACAATCAGCCCAGCCGCAGACAACTAT...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGGATCACTTTTGCGTTaGGGTCCTCATTCACAACAG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGGSLLR*GPHSQQ
Trigger: CTGTTGTGAATGAGGACCCCAACGCAAAAGTGATCC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGCATGCCACAGCTGGGTaGTACTGCACACAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQHATAG*YCTQGC
Trigger: GCACCCTTGTGTGCAGTACCACCCAGCTGTGGCATG...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCTCGGGGGAGAGCTGCTaGCGGAGTTGCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPSGESC*RSCSSS
Trigger: GGAACTGGAGCAACTCCGCCAGCAGCTCTCCCCCGA...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACCTCTCTTCTGCCCACTaGGTCACCTTCTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNLSSAH*VTFCCA
Trigger: AGCGCAGCAGAAGGTGACCCAGTGGGCAGAAGAGAG...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGGCAACCTCCCCCTGCTaGCTGATGATAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQATSPC*LMIGTA
Trigger: TGCAGTCCCTATCATCAGCCAGCAGGGGGAGGTTGC...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp GCAACAACAAACAAGAGATTCTACCATGACTCTGCATGCTTGAGAAAGAGGAATCGCATCACTTCCACGTaGAGACGCCCTGCAACCTCC +
Preference number: 4 (lower is better)
Translates to: ATTNKRFYHDSACLRKRNRITST*RRPATS
Trigger: GGAGGTTGCAGGGCGTCTCCACGTGGAAGTGATGCG...ATTCCTCTTTCTCAAGCATGCAGAGTCATGGTAGAATCTCTTGTTTGTTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAACTCCACCACACGCTCTaGAACAGCTCCTGTAACACG +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRELHHTL*NSSCNT
Trigger: CGTGTTACAGGAGCTGTTCCAGAGCGTGTGGTGGAG...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATGTCCACATGCAGCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACGGCTCCCACTTTCACTaGAATTCTCCGAAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: MSTCSTQLVNAHCCFTGDGSHFH*NSPKSH
Trigger: ATGACTCTTCGGAGAATTCCAGTGAAAGTGGGAGCC...GTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGCTGCATGTGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp ATGCAGCAGCCAATTCTGCAGGCCAGAGTTAAACTACTGGAGAGATATGACAGGGGCCCCATACTTCAATaGCCAGTGCTCCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: MQQPILQARVKLLERYDRGPILQ*PVLHLK
Trigger: TTTCAGATGGAGCACTGGCCATTGAAGTATGGGGCC...CCTGTCATATCTCTCCAGTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCAGTTACACAGCCGATaGATACTGACAGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGQLHSR*ILTGWL
Trigger: AAGCCATCCTGTCAGTATCCATCGGCTGTGTAACTG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGCTCTTTGGAGTTTGGTaGACCTGGCAGTTACACAGC +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLLFGVW*TWQLHS
Trigger: GCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAG...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTATTCTGCAGCCCTCTTTGGAGTTTaGTGGACCTGGCAGTTACAC +
Preference number: 4 (lower is better)
Translates to: LVNAHCCFTGDTTLLYSAALFGV*WTWQLH
Trigger: GTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGC...TGCAGAATAGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCACTGTCCAGCCCTCTTTaGAGTTTGGTGGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSLSSPL*SLVDLA
Trigger: TGCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAG...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCCACTGCTCCACAAGCTaGGCTTCCCGCTCCACATCG +
Preference number: 4 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFHCSTS*ASRSTS
Trigger: CGATGTGGAGCGGGAAGCCCAGCTTGTGGAGCAGTG...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCCATTCCAGGAGGTaGGATCCAGTCGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNFHSRR*DPVGRC
Trigger: GCACCTGCCGACTGGATCCCACCTCCTGGAATGGAA...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGAAGAGAACTGGTATGTaGGTTTCCATTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQKRTGM*VSIPGG
Trigger: ACCTCCTGGAATGGAAACCCACATACCAGTTCTCTT...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCACGCCGGATGCATaGGGGCCAACAAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNFTPDA*GPTSCS
Trigger: TGAGCAGCTTGTTGGCCCCCATGCATCCGGCGTGAA...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGGCTCCTTGGGCAGGATaGAGTTCACGCCGGATGCAT +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQAPWAG*SSRRMH
Trigger: ATGCATCCGGCGTGAACTCCATCCTGCCCAAGGAGC...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGACATTATGAACATTTaGTGTACTGAGGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASDIMNI*CTEAPP
Trigger: CGGAGGAGCCTCAGTACACCAAATGTTCATAATGTC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGGTCCAACTGGTTCTCTaGCCAACCCTTGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLVQLVL*PTLVIF
Trigger: GAAGATGACAAGGGTTGGCCAGAGAACCAGTTGGAC...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGGGGCTTGAAAAACTTTaGTGGCTGAGGAGAGAATGC +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGGLEKL*WLRREC
Trigger: GCATTCTCTCCTCAGCCACCAAAGTTTTTCAAGCCC...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGGGGCTTGAAAAACTTTaGTGGCTGAGGAGAGAATGC +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVGLEKL*WLRREC
Trigger: GCATTCTCTCCTCAGCCACCAAAGTTTTTCAAGCCC...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTTATGCATCCTTCGTCTGAATaGCCAGCTGGTCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GAGGRPKNIAVRFLSVLMHPSSE*PAGLSC
Trigger: ACAGCTCAGACCAGCTGGCCATTCAGACGAAGGATG...CATAAGCACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGGTGTGGAGTGCTCGGTaGAGTCTGCATCCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: RVICIRSSPANMVKGEPLVWSAR*SLHPSS
Trigger: AGACGAAGGATGCAGACTCCACCGAGCACTCCACAC...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGTGTGGAGTGCTCGGTaGAGTCTGCATCCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREVWSAR*SLHPSS
Trigger: AGACGAAGGATGCAGACTCCACCGAGCACTCCACAC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGATCATGCACAAGCGATaGTGTGGAGTGCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMIMHKR*CGVLGG
Trigger: TCCACCGAGCACTCCACACCATCGCTTGTGCATGAT...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTATGATGGGCTCCCTTTaGCTAAGGCACTGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGMMGSL*LRHCFP
Trigger: AGGAAAACAGTGCCTTAGCCAAAGGGAGCCCATCAT...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCCTACCGTCACCTCCCTaGGGCAGAATCCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPLPSPP*GRIPWL
Trigger: CAGCCAGGGGATTCTGCCCCAGGGAGGTGACGGTAG...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGCTGGCTGGGGTGGTaGAGCCCATCGGAGACAGTC +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPSWLGW*SPSETV
Trigger: GACTGTCTCCGATGGGCTCCACCACCCCAGCCAGCT...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCTGCAGCTGGCTGGGGTaGTGGAGCCCATCGGAGACA +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPCSWLG*WSPSET
Trigger: TGTCTCCGATGGGCTCCACCACCCCAGCCAGCTGCA...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCCGGTCCAGGCAACTGTaGAGTCAGGACCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCRSRQL*SQDPSH
Trigger: ATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCG...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR CAA 72 bp ACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGTCATaGTCAACAGTTATAATACAATGTCAAGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TVQATVESGPQS*STVIIQCQVSR
Trigger: CCTGCTGACTTGACATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp ACACACATTCCTTTCTTATACCCCATTTGTTGGATGAATGCCCCACAGGATTTTGGGTGCAGGACCGTTTaGTTCCCTTCCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: THIPFLYPICWMNAPQDFGCRTV*FPSIST
Trigger: GGTGGAGATGGAAGGGAATCAAACGGTCCTGCACCC...AAAATCCTGTGGGGCATTCATCCAACAAATGGGGTATAAGAAAGGAATGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS-3UTR TCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTTGAAAACCACTTCTTaGCCAGCGTATTTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPLKTTS*PAYFVV
Trigger: CACTACAAAATACGCTGGTCAAGAAGTGGTTTTCAA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTCACGCATTATACCCCTaGAAGGCTTTTTCAAGAATT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPHALYP*KAFSRI
Trigger: AATTCTTGAAAAAGCCTTTCAGGGGTATAATGCGTG...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGAAAAGCTGGATATCTTaGGAGGTATCTGCACCCACC +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLKSWIS*EVSAPT
Trigger: GGTGGGTGCAGATACCTCTCAAGATATCCAGCTTTT...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGAGTTCCCGCTCATACATaGGCCGCTGCTCCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRVPAHT*AAAPLG
Trigger: CCCTAGAGGAGCAGCGGCTCATGTATGAGCGGGAAC...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCACTTGGTAATCGGTaGGTTTGCTCATTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGSLGNR*VCSFPQ
Trigger: CTGAGGAAATGAGCAAACTCACCGATTACCAAGTGA...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTATTCTGCAAGCTTTTTGACTCGGTaGATGATTTCCCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LVNAHCCFTGDTTLLYSASFLTR*MISPLL
Trigger: CAGCAGCGGGGAAATCATTCACCGAGTCAAAAAGCT...TGCAGAATAGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AGGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGGCCAGTGCTCCATCTaGAATGAACTCCAGAAATTC +
Preference number: 4 (lower is better)
Translates to: RWRGRWKTKEYSCEISQCGQCSI*NELQKF
Trigger: GAATTTCTGGAGTTCATTTCAGATGGAGCACTGGCC...ACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp ATGCAGCAGCCAATTCTGCAGGCCAGAGTTAAACTACTGGAGAGATATGACAGGTTTAATGAGTGCATCTaGCCACCTCTCCCTTACGCA +
Preference number: 4 (lower is better)
Translates to: MQQPILQARVKLLERYDRFNECI*PPLPYA
Trigger: TGCGTAAGGGAGAGGTGGTCAGATGCACTCATTAAA...CCTGTCATATCTCTCCAGTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGGCAGGGTGGCTGAGTTaGACTGTGGTTTTCACAATT +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLAGWLS*TVVFTI
Trigger: AATTGTGAAAACCACAGTTCAACTCAGCCACCCTGC...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTTCAAACTCTGCGTaGAACTCTGTTTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPASSNSA*NSVCCK
Trigger: TTTACAACAAACAGAGTTTCACGCAGAGTTTGAAGA...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGGGCATGAGGAGTCTCTaGTGTACAACCTTCTTTATT +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQGMRSL*CTTFFI
Trigger: AATAAAGAAGGTTGTACATCAGAGACTCCTCATGCC...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGGCATGAGGAGTCTCTaGTGTACAACCTTCTTTATT +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASGMRSL*CTTFFI
Trigger: AATAAAGAAGGTTGTACATCAGAGACTCCTCATGCC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTAAAAACTTTGGTGGCTaGGGAGAGAATGCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAKNFGG*GENALK
Trigger: TTTTAAAGCATTCTCTCCTCAGCCACCAAAGTTTTT...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGAAAAACTTTGGTGGCTaGGGAGAGAATGCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGKNFGG*GENALK
Trigger: TTTTAAAGCATTCTCTCCTCAGCCACCAAAGTTTTT...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGCAGGCATTAGGGGCTTaGAAAACTTTGGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMQALGA*KTLVAE
Trigger: CTCAGCCACCAAAGTTTTTCAAGCCCCTAATGCCTG...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTGGCATTGTAAACACTaGAGTCAGCAAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGWHCKH*SQQTPQ
Trigger: CTGTGGAGTTTGCTGACTTCAGTGTTTACAATGCCA...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCTCTGCATCCTTCGTCTaGATGGCCAGCTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCSASFV*MASWSE
Trigger: CTCAGACCAGCTGGCCATTCAGACGAAGGATGCAGA...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGAAAATCTTTTCCCTCTaGCACTCCCATAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGKIFSL*HSHKFC
Trigger: ACAGAATTTATGGGAGTGTCAGAGGGAAAAGATTTT...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGAAGGGCCTCTGGGGTTaGCATACAGTTAGACATACT +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLKGLWG*HTVRHT
Trigger: AGTATGTCTAACTGTATGTCAACCCCAGAGGCCCTT...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGCTCCAGCTTCTGGTCTaGGGTCCAGCCAGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RSPVPYDFLQITFICILVLQLLV*GPARRQ
Trigger: CTGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAG...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGAAAACCACGCCACAGTaGAACCTACCAATCCAAAAC +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVKTTPQ*NLPIQN
Trigger: GTTTTGGATTGGTAGGTTTCACTGTGGCGTGGTTTT...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGGGAGAATTTTACAAATaGAGACACGACAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVGEFYK*RHDSRV
Trigger: GACCCTGCTGTCGTGTCTTCATTTGTAAAATTCTCC...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp CTTTGCCAACCATCCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGAGATGTGAGCCACTGTaGCCAGCCTTTCTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: LCQPSIYSYVGSDAIHLTRCEPL*PAFLPV
Trigger: AACAGGGAGAAAGGCTGGTCACAGTGGCTCACATCT...CGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGGATGGTTGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS-3UTR GCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCGGAATAAGGCCCAGCTaGTCAGCATGGCCCATCATG +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCGIRPS*SAWPIM
Trigger: CATGATGGGCCATGCTGAGCAGCTGGGCCTTATTCC...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTTCAGTCGCTCTCCTaGAGCTCCTGTTTTAGATAC +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGFQSLS*SSCFRY
Trigger: GTATCTAAAACAGGAGCTGCAGGAGAGCGACTGAAA...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTTCTCGGATCACTTTTaGGTTGGGGTCCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLFSDHF*VGVLIH
Trigger: GTGAATGAGGACCCCAACGCAAAAGTGATCCGAGAA...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGAGGCTGAATTCCTATaGCAAAAAGCTGGATATCTT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPEAEFL*QKAGYL
Trigger: AAGATATCCAGCTTTTTGGCATAGGAATTCAGCCTC...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGGACGTCTCCATCAGATaGAATGTCAATCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGDVSIR*NVNLTV
Trigger: CACTGTGAGATTGACATTGCATCTGATGGAGACGTC...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCGGAAGCCTCACTGGCTaGATCCAGGTCATGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFGSLTG*IQVMLW
Trigger: CCAGAGCATGACCTGGATGCAGCCAGTGAGGCTTCC...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGGGAAGCCTCACTGGCTaGATCCAGGTCATGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQGSLTG*IQVMLW
Trigger: CCAGAGCATGACCTGGATGCAGCCAGTGAGGCTTCC...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ACCTGTGGCAAAATATATATAAGCCATCCTGAATGCAAGGCTGGCACCAAGGTATTCATCCCTCTCTTCTaGCCACTGGGTCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: TCGKIYISHPECKAGTKVFIPLF*PLGHLL
Trigger: CAGAAGGTGACCCAGTGGGCAGAAGAGAGGGATGAA...TACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp ATGCAGCAGCCAATTCTGCAGGCCAGAGTTAAACTACTGGAGAGATATGACAGGATTGGCACTGAGGTTTaGAGCAGGGATCTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: MQQPILQARVKLLERYDRIGTEV*SRDLKS
Trigger: ACTCTTCAGATCCCTGCTGCAAACCTCAGTGCCAAT...CCTGTCATATCTCTCCAGTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp GCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTTGGTTCACTCACTATTaGACCTCTCTTCCTATTGGC +
Preference number: 4 (lower is better)
Translates to: ALSLLMHTAASQVTQLCSWFTHY*TSLPIG
Trigger: GCCAATAGGAAGAGAGGTGCAATAGTGAGTGAACCA...AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTTCCGTAGAGTCTCTTTaGCTCAGGAACTTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASSVESL*LRNFFL
Trigger: AAGGAAAAAGTTCCTGAGGCAAAGAGACTCTACGGA...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGCCTGCAACCTCCCCCTaGTGGCTGATGATAGGGACT +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQPATSP*WLMIGT
Trigger: AGTCCCTATCATCAGCCAGCAGGGGGAGGTTGCAGG...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTTCATTCCACCTGTCATaGAGTGTTCTTGTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASSFHLS*SVLVLA
Trigger: TGCTAAGACAAGAACACTGCATGACAGGTGGAATGA...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTCTCTATCTCCTCAGTTaGCTTTGGTATATTGGATAC +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFALYLLS*LWYIGY
Trigger: GTATCCAATATACCAAAGGCAACTGAGGAGATAGAG...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAATTCGTTTTCACTCCTTaGTGCCAGGAGAGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREFVFTP*CQESQR
Trigger: ACGCTGGCTCTCCTGGCAGCAAGGAGTGAAAACGAA...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTCTCCCCATCTGATGTaGCTTCGTTTTCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLSPHLM*LRFHSL
Trigger: CAAGGAGTGAAAACGAAGGCACATCAGATGGGGAGA...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGCATGCTGCTGCCATTaGTTCCTGAGGGTACAATGC +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREACCCH*FLRVQC
Trigger: GCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259711.11
CDS-3UTR GCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACGTGCTCGGTGGAGTCTaGATCCTTCGTCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNVLGGV*ILRLNG
Trigger: GCCATTCAGACGAAGGATGCAGACTCCACCGAGCAC...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGACGGCCTGAAATCATaGACAAGCGATGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREDGLKS*TSDGVE
Trigger: CTCCACACCATCGCTTGTGCATGATTTCAGGCCGTC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTAACATGAGCCAGTCCTaGACAGTGATTTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASNMSQS*TVIWSF
Trigger: AAAACTCCAAATCACTGTGCAGGACTGGCTCATGTT...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGCATCGGAGACAGTCTTaGCGCCTGTTTTATTTGGTA +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGHRRQS*RLFYLV
Trigger: TACCAAATAAAACAGGCGGCAAGACTGTCTCCGATG...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCATCGGAGACAGTCTTaGCGCCTGTTTTATTTGGTA +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVHRRQS*RLFYLV
Trigger: TACCAAATAAAACAGGCGGCAAGACTGTCTCCGATG...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAATTCTCTAACTTGGAATaGAGCTGGCTGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREFSNLE*SWLGWW
Trigger: CCACCACCCCAGCCAGCTGCATTCCAAGTTAGAGAA...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCTGTGGGCTCATCTTTaGTGTCACAAACAACTGGAT +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGLWAHL*CHKQLD
Trigger: ATCCAGTTGTTTGTGACAGCAAAGATGAGCCCACAG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACACCCAAGTGACAAAGTaGCGCTTCTCCCACTGGGGA +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNTQVTK*RFSHWG
Trigger: TCCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGT...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGACCCAAGTGACAAAGTaGCGCTTCTCCCACTGGGGA +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQTQVTK*RFSHWG
Trigger: TCCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGT...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGCAAATCACCTTTATCTaGATTTTAGTGTGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGQITFI*ILVCSL
Trigger: AAGGCTGCACACTAAAATGCAGATAAAGGTGATTTG...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGCAGCATGGCCCATCATaGAAAAGGATTTTCCCGAAC +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLQHGPS*KRIFPN
Trigger: GTTCGGGAAAATCCTTTTCCATGATGGGCCATGCTG...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTCTGCATATCTTAATGTaGAGAGGGTCTCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFALHILM*RGSLHS
Trigger: ACTATGAAGAGACCCTCTCCACATTAAGATATGCAG...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGGGTTCACAATCCTTTTaGCTCGGTCTGCATATCTTA +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQGSQSF*LGLHIL
Trigger: TAAGATATGCAGACCGAGCCAAAAGGATTGTGAACC...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGGTTCACAATCCTTTTaGCTCGGTCTGCATATCTTA +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASGSQSF*LGLHIL
Trigger: TAAGATATGCAGACCGAGCCAAAAGGATTGTGAACC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCCTTGCATTTTCTTTTaGAGTGAGAGTGACGTCTCC +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGPCIFF*SESDVS
Trigger: GGAGACGTCACTCTCACTCCAAAAGAAAATGCAAGG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGATCCAGGTCATGCTCTaGCGGGCCCGTTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RVICIRSSPANMVKGEPLIQVML*RARFFF
Trigger: GAAAAAGAAACGGGCCCGCCAGAGCATGACCTGGAT...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGCAGAGGAAGCCTCACTaGCTGCATCCAGGTCATGCT +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQQRKPH*LHPGHA
Trigger: AGCATGACCTGGATGCAGCCAGTGAGGCTTCCTCTG...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTTCATAGTTATAGTCTaGTTCAGAGGAAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPFIVIV*FRGSLT
Trigger: AGTGAGGCTTCCTCTGAACCAGACTATAACTATGAA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGAACCACATTTTGAACTaGGTCATTACTATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGNHILN*VITIQG
Trigger: ACCCTGAATAGTAATGACCCAGTTCAAAATGTGGTT...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGAGGGCCGCTACTCTGTaGCTGCCTGTCGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLRAATL*LPVGGE
Trigger: CTCTCCCCCGACAGGCAGCCACAGAGTAGCGGCCCT...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTCCACCACACGCTCTaGAACAGCTCCTGTAACACG +
Preference number: 4 (lower is better)
Translates to: LKPTTRQYDRNGSGTYNLLHHTL*NSSCNT
Trigger: CGTGTTACAGGAGCTGTTCCAGAGCGTGTGGTGGAG...AAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAATGTACTGGGCATCCTTaGACTGTGGTGAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRECTGHP*TVVKAP
Trigger: AGGTGCCTTCACCACAGTCCAAGGATGCCCAGTACA...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGTGTACTGGGCATCCTTaGACTGTGGTGAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: RVICIRSSPANMVKGEPLCTGHP*TVVKAP
Trigger: AGGTGCCTTCACCACAGTCCAAGGATGCCCAGTACA...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp CTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTATTCTGCAAAGGTCACTGTGTACTaGGCATCCTTGGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: LVNAHCCFTGDTTLLYSAKVTVY*ASLDCG
Trigger: ACCACAGTCCAAGGATGCCCAGTACACAGTGACCTT...TGCAGAATAGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGGGCCCCATACTTCAATaGCCAGTGCTCCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMGPILQ*PVLHLK
Trigger: TTTCAGATGGAGCACTGGCCATTGAAGTATGGGGCC...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGTTTCCAGCACACCGGTaGCCCCATACTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQFPAHR*PHTSMA
Trigger: GGCCATTGAAGTATGGGGCCACCGGTGTGCTGGAAA...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACGGAGTTTGGTGGACCTaGCAGTTACACAGCCGATGG +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNGVWWT*QLHSRW
Trigger: CCATCGGCTGTGTAACTGCCAGGTCCACCAAACTCC...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTATTCTGCACTCTTTGGAGTTTGGTaGACCTGGCAGTTACACAGC +
Preference number: 4 (lower is better)
Translates to: LVNAHCCFTGDTTLLYSALFGVW*TWQLHS
Trigger: GCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAG...TGCAGAATAGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTAAGAGAACTGGTATGTaGGTTTCCATTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGKRTGM*VSIPGG
Trigger: ACCTCCTGGAATGGAAACCCACATACCAGTTCTCTT...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTATCGAGGAAGAGAACTaGTATGTGGGTTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: ALSLLMHTAASQVTQLCSIEEEN*YVGFHS
Trigger: GGAATGGAAACCCACATACCAGTTCTCTTCCTCGAT...AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGTTCACGCCGGATGCATaGGGGCCAACAAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQFTPDA*GPTSCS
Trigger: TGAGCAGCTTGTTGGCCCCCATGCATCCGGCGTGAA...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AGGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTAATCCCAAGAGGCTGTaGCTGAAACCTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: RWRGRWKTKEYSCEISQCNPKRL*LKPHHH
Trigger: GTGATGATGAGGTTTCAGCCACAGCCTCTTGGGATT...ACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTAATCCTTTCATTCTGTaGTGTGACCCTATTCAAGTG +
Preference number: 4 (lower is better)
Translates to: TETAVQEVSLLLCGLIFANPFIL*CDPIQV
Trigger: CACTTGAATAGGGTCACACCACAGAATGAAAGGATT...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGATGATGGGCTCCCTTTaGCTAAGGCACTGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLMMGSL*LRHCFP
Trigger: AGGAAAACAGTGCCTTAGCCAAAGGGAGCCCATCAT...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACGCAGAATCCCCTGGCTaGCTGGCTAATTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNAESPG*LANFAG
Trigger: CCCAGCAAAATTAGCCAGCCAGCCAGGGGATTCTGC...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGCTTCAAGGATGTTGGTaGTGTGTTCTACCGTCACCT +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLLQGCW*CVLPSP
Trigger: AGGTGACGGTAGAACACACCACCAACATCCTTGAAG...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGGGTCTTCAAGGATGTTaGTGGTGTGTTCTACCGTCA +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLGLQGC*WCVLPS
Trigger: TGACGGTAGAACACACCACCAACATCCTTGAAGACC...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTAATTCTGTGAAAGAATaGTCTTCAAGGATGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPANSVKE*SSRMLV
Trigger: CACCAACATCCTTGAAGACCATTCTTTCACAGAATT...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGAATTCTGTGAAAGAATaGTCTTCAAGGATGTTGGTG +
Preference number: 4 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGNSVKE*SSRMLV
Trigger: CACCAACATCCTTGAAGACCATTCTTTCACAGAATT...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCCAAAAGGCTGCCTCTaGAATTATTACCTGGTCATT +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASPKGCL*NYYLVI
Trigger: AATGACCAGGTAATAATTCCAGAGGCAGCCTTTTGG...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCAGTTATGTGCCTGAGGTaGAGGCATGCTCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSVMCLR*RHALQR
Trigger: CCTTTGCAGAGCATGCCTCCACCTCAGGCACATAAC...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp ACACACATTCCTTTCTTATACCCCATTTGTTGGATGAATGCCCCACAGGATTTTCAGGCTGGCGTGCAGTaGCTCAAACAGCTCACTGGA +
Preference number: 4 (lower is better)
Translates to: THIPFLYPICWMNAPQDFQAGVQ*LKQLTG
Trigger: TCCAGTGAGCTGTTTGAGCCACTGCACGCCAGCCTG...AAAATCCTGTGGGGCATTCATCCAACAAATGGGGTATAAGAAAGGAATGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS-3UTR TCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGCACGCATTATACCCCTaGAAGGCTTTTTCAAGAATT +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQHALYP*KAFSRI
Trigger: AATTCTTGAAAAAGCCTTTCAGGGGTATAATGCGTG...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTAACTTTAAAGGTCTGTaGCTCATTTTGCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPNFKGL*LILLQR
Trigger: TCTTTGGAGCAAAATGAGTCACAGACCTTTAAAGTT...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGTGCTCCATCTGAAATaGACTCCAGAAATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGVLHLK*TPEILL
Trigger: CAGAAGAATTTCTGGAGTTCATTTCAGATGGAGCAC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGGCACAGGTTTCACCGTaGCTTGTACTCTACGGGAAT +
Preference number: 4 (lower is better)
Translates to: RVICIRSSPANMVKGEPLAQVSP*LVLYGN
Trigger: ATTCCCGTAGAGTACAAGTCACGGTGAAACCTGTGC...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAACAGCCGATGGATACTaGCAGGATGGCTTCAACCAT +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRETADGY*QDGFNH
Trigger: ATGGTTGAAGCCATCCTGTCAGTATCCATCGGCTGT...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCAACAGCCGATGGATACTaGCAGGATGGCTTCAACCAT +
Preference number: 4 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSTADGY*QDGFNH
Trigger: ATGGTTGAAGCCATCCTGTCAGTATCCATCGGCTGT...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGGCTGCTCATTGGCACTaGGGTCATCCGCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: RVICIRSSPANMVKGEPLAAHWH*GHPHSN
Trigger: ATTTGAATGCGGATGACCTCAGTGCCAATGAGCAGC...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCATCACTGTGCTTTATaGTGGGCAGGTAGAAAAACT +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGHHCAL*WAGRKT
Trigger: AGTTTTTCTACCTGCCCATCATAAAGCACAGTGATG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCGAACATTTGGTGTACTaGGGCTCCTCCGAATGTGCC +
Preference number: 4 (lower is better)
Translates to: LNPPPGNMTEMVPELTIFEHLVY*GSSECA
Trigger: GGCACATTCGGAGGAGCCTCAGTACACCAAATGTTC...GAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCTGGAAGAGACATTATaGACATTTGGTGTACTGAGG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGLEETL*TFGVLR
Trigger: CCTCAGTACACCAAATGTTCATAATGTCTCTTCCAG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAATGGCCAGCTGGTCTaGGCTGTCACTAGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQNGQLV*AVTRRD
Trigger: GTCCCTTCTAGTGACAGCTCAGACCAGCTGGCCATT...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGTGTTTGAGGACGGCCTaGAATCATGCACAAGCGATG +
Preference number: 4 (lower is better)
Translates to: RVICIRSSPANMVKGEPLCLRTA*NHAQAM
Trigger: CATCGCTTGTGCATGATTTCAGGCCGTCCTCAAACA...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGCCAGTCCTGCACAGTaGTTTGGAGTTTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREASPAQ*FGVFLR
Trigger: CCTGAGAAAAACTCCAAATCACTGTGCAGGACTGGC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTAAAATCTTTTCCCTCTaGCACTCCCATAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPKIFSL*HSHKFC
Trigger: ACAGAATTTATGGGAGTGTCAGAGGGAAAAGATTTT...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCACCAAGTTGTTGCGGTaGAGGGCCTCTGGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPTKLLR*RASGVD
Trigger: GTCAACCCCAGAGGCCCTTCACCGCAACAACTTGGT...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGATAAGGCACAAATTTaGTTTTACCCTTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGDKAQI*FYPCQL
Trigger: CAGCTGGCAAGGGTAAAAGCAAATTTGTGCCTTATC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACCTCTTCATAGTTGTCTaGGGCTGGGCTGATTGTGGC +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNLFIVV*GWADCG
Trigger: GCCACAATCAGCCCAGCCGCAGACAACTATGAAGAG...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGGCCTTCATGGCCTCTaGCTGAGAGAGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPGLHGL*LRELLS
Trigger: AGAGAGCAGCTCTCTCAGGCAGAGGCCATGAAGGCC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAATCTTGAGAGGTATCTaGACCCACCCTGGTGTGATC +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREILRGI*THPGVI
Trigger: GATCACACCAGGGTGGGTGCAGATACCTCTCAAGAT...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCAGAGGCTGAATTCCTATaGCAAAAAGCTGGATATCTT +
Preference number: 4 (lower is better)
Translates to: MAARGLVAKGIMAPNLQSEAEFL*QKAGYL
Trigger: AAGATATCCAGCTTTTTGGCATAGGAATTCAGCCTC...TGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp TTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTCATACATGAGCCGCTaGTCCTCTAGGGCACTTCTC +
Preference number: 4 (lower is better)
Translates to: LNPPPGNMTEMVPELTIFSYMSR*SSRALL
Trigger: GAGAAGTGCCCTAGAGGAGCAGCGGCTCATGTATGA...GAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCTCATACATGAGCCGCTaGTCCTCTAGGGCACTTCTC +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCSYMSR*SSRALL
Trigger: GAGAAGTGCCCTAGAGGAGCAGCGGCTCATGTATGA...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGAGCTGCTGGCGGAGTTaGTCCAGTTCCCGCTCATAC +
Preference number: 4 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLSCWRS*SSSRSY
Trigger: GTATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCT...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGAAGCTGCTGGCGGAGTTaGTCCAGTTCCCGCTCATAC +
Preference number: 4 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRSCWRS*SSSRSY
Trigger: GTATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCT...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCTTCATCCCTCTCTTCTaGCCACTGGGTCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCFIPLF*PLGHLL
Trigger: CAGAAGGTGACCCAGTGGGCAGAAGAGAGGGATGAA...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGATTGGCACTGAGGTTTaGAGCAGGGATCTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMIGTEV*SRDLKS
Trigger: ACTCTTCAGATCCCTGCTGCAAACCTCAGTGCCAAT...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTCATTCCACCTGTCATaGAGTGTTCTTGTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGSFHLS*SVLVLA
Trigger: TGCTAAGACAAGAACACTGCATGACAGGTGGAATGA...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGTCATTCCACCTGTCATaGAGTGTTCTTGTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVSFHLS*SVLVLA
Trigger: TGCTAAGACAAGAACACTGCATGACAGGTGGAATGA...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp CAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTGCTCTCCCCATCTGATGTaGCTTCGTTTTCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: QSSSHVCYCVLLACCCHCSPHLM*LRFHSL
Trigger: CAAGGAGTGAAAACGAAGGCACATCAGATGGGGAGA...GCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAAGAATGTTTTCCACCTaGAGCACGCCTCGAGTGTAC +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRERMFST*STPRVY
Trigger: GTACACTCGAGGCGTGCTGCAGGTGGAAAACATTCT...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCTTGACTGTGACGGCCTaGCGGAGCCGTTCAAGACTC +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPLTVTA*RSRSRL
Trigger: GAGTCTTGAACGGCTCCGGCAGGCCGTCACAGTCAA...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCGTGCTCGGTGGAGTCTaGATCCTTCGTCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFVLGGV*ILRLNG
Trigger: GCCATTCAGACGAAGGATGCAGACTCCACCGAGCAC...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGCGATGGTGTGGAGTaGTCGGTGGAGTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPSDGVE*SVESAS
Trigger: GGATGCAGACTCCACCGAGCACTCCACACCATCGCT...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCTTCTCTAACTTGGAATaGAGCTGGCTGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCFSNLE*SWLGWW
Trigger: CCACCACCCCAGCCAGCTGCATTCCAAGTTAGAGAA...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTATGAAATATGGTAGATaGTACCAGAACACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPMKYGR*YQNTLG
Trigger: TCCCAAAGTGTTCTGGTAGCATCTACCATATTTCAT...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTAGGTACAACGGCTCATaGCTGCAATCCCAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: LKPTTRQYDRNGSGTYNLRYNGS*LQSQCL
Trigger: AAGGCACTGGGATTGCAGGCATGAGCCGTTGTACCT...AAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCCTCACCGTGAGGTTGTaGCTCCCTGGTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCLTVRL*LPGHSL
Trigger: TAGAGAATGACCAGGGAGGCACAACCTCACGGTGAG...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGAAGGTGGCCCAGGAAGTaGACGGTGTGGATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRRWPRK*TVWILQ
Trigger: CTGGAGAATCCACACCGTGCACTTCCTGGGCCACCT...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTGCAAAGAGGGATTTaGAAGCTCATTCTTAGGCAA +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVLQRGI*KLILRQ
Trigger: TTGCCTAAGAATGAGCTTGCAAATCCCTCTTTGCAG...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGTTCTCGTCGGTTCATaGGCCGGACCCGGACGGCAA +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLVLVGS*AGPGRQ
Trigger: TTGCCGTCCGGGTCCGGCCCATGAACCGACGAGAAC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGCAAAGGCAAATACCTTaGGAGGTTTCCTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLQRQIP*EVSFLP
Trigger: AGGGAGAAAGGAAACCTCCCAAGGTATTTGCCTTTG...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGATAGTTGTCTGCGGCTaGGCTGATTGTGGCTATCAT +
Preference number: 4 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMIVVCG*ADCGYH
Trigger: ATGATAGCCACAATCAGCCCAGCCGCAGACAACTAT...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGGGTTCACAATCCTTTTaGCTCGGTCTGCATATCTTA +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGGSQSF*LGLHIL
Trigger: TAAGATATGCAGACCGAGCCAAAAGGATTGTGAACC...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTATTCTGCACCTTTCCTCCTCACTTaGATAGCTGGTTCACTCACT +
Preference number: 4 (lower is better)
Translates to: LVNAHCCFTGDTTLLYSAPFLLT*IAGSLT
Trigger: AGTGAGTGAACCAGCTATCCAAGTGAGGAGGAAAGG...TGCAGAATAGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGCAACCTCCCCCTGCTaGCTGATGATAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPATSPC*LMIGTA
Trigger: TGCAGTCCCTATCATCAGCCAGCAGGGGGAGGTTGC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGCTCCACCACACGCTCTaGAACAGCTCCTGTAACACG +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQLHHTL*NSSCNT
Trigger: CGTGTTACAGGAGCTGTTCCAGAGCGTGTGGTGGAG...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCTTCCATTCCAGGAGGTaGGATCCAGTCGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPFHSRR*DPVGRC
Trigger: GCACCTGCCGACTGGATCCCACCTCCTGGAATGGAA...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGAAGAGAACTGGTATGTaGGTTTCCATTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLKRTGM*VSIPGG
Trigger: ACCTCCTGGAATGGAAACCCACATACCAGTTCTCTT...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGCTCCTTGGGCAGGATaGAGTTCACGCCGGATGCAT +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPAPWAG*SSRRMH
Trigger: ATGCATCCGGCGTGAACTCCATCCTGCCCAAGGAGC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTTCGAGGAGAATCCCTaGGTAAAGTTCCATAACATG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGFEENP*VKFHNM
Trigger: CATGTTATGGAACTTTACCCAGGGATTCTCCTCGAA...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTGCGGGCTTGAAAAACTTTaGTGGCTGAGGAGAGAATGC +
Preference number: 4 (lower is better)
Translates to: QSSSHVCYCVLLACCCHCGLEKL*WLRREC
Trigger: GCATTCTCTCCTCAGCCACCAAAGTTTTTCAAGCCC...GCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGAGCACAAGCGATGGTGTaGAGTGCTCGGTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRAQAMV*SARWSL
Trigger: CAGACTCCACCGAGCACTCCACACCATCGCTTGTGC...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGTTCTCAGGGATGCTCTaGGATGATGGGCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQFSGML*DDGLPL
Trigger: CAAAGGGAGCCCATCATCCCAGAGCATCCCTGAGAA...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGCTACCGTCACCTCCCTaGGGCAGAATCCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RSPVPYDFLQITFICILVLPSPP*GRIPWL
Trigger: CAGCCAGGGGATTCTGCCCCAGGGAGGTGACGGTAG...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTTATGCTTCAAGGATGTTGGTaGTGTGTTCTACCGTCACCT +
Preference number: 4 (lower is better)
Translates to: GAGGRPKNIAVRFLSVLMLQGCW*CVLPSP
Trigger: AGGTGACGGTAGAACACACCACCAACATCCTTGAAG...CATAAGCACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGAAACTTGGAATGCAGCTaGCTGGGGTGGTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRNLECS*LGWWSP
Trigger: TGGGCTCCACCACCCCAGCCAGCTGCATTCCAAGTT...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCAGGAAGTGCACGGTGTaGATTCTCCAGCTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCRKCTV*ILQLLV
Trigger: GACCAGAAGCTGGAGAATCCACACCGTGCACTTCCT...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTTGAAAACCACTTCTTaGCCAGCGTATTTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGLKTTS*PAYFVV
Trigger: CACTACAAAATACGCTGGTCAAGAAGTGGTTTTCAA...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGTTGAAAACCACTTCTTaGCCAGCGTATTTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVLKTTS*PAYFVV
Trigger: CACTACAAAATACGCTGGTCAAGAAGTGGTTTTCAA...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGCACGCATTATACCCCTaGAAGGCTTTTTCAAGAATT +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGHALYP*KAFSRI
Trigger: AATTCTTGAAAAAGCCTTTCAGGGGTATAATGCGTG...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGGGTCTGCATTCAGATTaGCTAAGTAGCATTTGTCAT +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVGLHSD*LSSICH
Trigger: ATGACAAATGCTACTTAGTCAATCTGAATGCAGACC...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGATCCTTGGACTGTGGTaGAGGCACCTCGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: RSPVPYDFLQITFICILVILGLW*RHLGVH
Trigger: GTGGACCCCGAGGTGCCTTCACCACAGTCCAAGGAT...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGATCCTTGGACTGTGGTaGAGGCACCTCGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLILGLW*RHLGVH
Trigger: GTGGACCCCGAGGTGCCTTCACCACAGTCCAAGGAT...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGGCCAGTGCTCCATCTaGAATGAACTCCAGAAATTC +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREGQCSI*NELQKF
Trigger: GAATTTCTGGAGTTCATTTCAGATGGAGCACTGGCC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGGCACAGGTTTCACCGTaGCTTGTACTCTACGGGAAT +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQAQVSP*LVLYGN
Trigger: ATTCCCGTAGAGTACAAGTCACGGTGAAACCTGTGC...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCAAGTGGCAGTGTCCCTaGATGCTGCACAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFKWQCP*MLHRFH
Trigger: GTGAAACCTGTGCAGCATTCAGGGACACTGCCACTT...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp ATGCAGCAGCCAATTCTGCAGGCCAGAGTTAAACTACTGGAGAGATATGACAGGCTGGAAGAGACATTATaGACATTTGGTGTACTGAGG +
Preference number: 4 (lower is better)
Translates to: MQQPILQARVKLLERYDRLEETL*TFGVLR
Trigger: CCTCAGTACACCAAATGTTCATAATGTCTCTTCCAG...CCTGTCATATCTCTCCAGTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCACTGACGGTTAAGGCATaGGGAGTCTCTGATGTACAA +
Preference number: 4 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSLTVKA*GVSDVQ
Trigger: TTGTACATCAGAGACTCCTCATGCCTTAACCGTCAG...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp GGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTTATGTGGCATTGTAAACACTaGAGTCAGCAAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: GAGGRPKNIAVRFLSVLMWHCKH*SQQTPQ
Trigger: CTGTGGAGTTTGCTGACTTCAGTGTTTACAATGCCA...CATAAGCACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGAAAATCTTTTCCCTCTaGCACTCCCATAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQKIFSL*HSHKFC
Trigger: ACAGAATTTATGGGAGTGTCAGAGGGAAAAGATTTT...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTAAAATCTTTTCCCTCTaGCACTCCCATAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASKIFSL*HSHKFC
Trigger: ACAGAATTTATGGGAGTGTCAGAGGGAAAAGATTTT...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGCAGCTGTGCAGGAAGTaGGCCTGCTTCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLQLCRK*ACFSVG
Trigger: GCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTG...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCCTGCTGCTTCACAGGTaGCACAACTCTGCTCTATTC +
Preference number: 4 (lower is better)
Translates to: LNPPPGNMTEMVPELTIFLLLHR*HNSALF
Trigger: GAATAGAGCAGAGTTGTGTCACCTGTGAAGCAGCAG...GAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp ACCTGTGGCAAAATATATATAAGCCATCCTGAATGCAAGGCTGGCACCAAGGTATTGGATGATTGTCTGTaGAAGGGCCTTAAACCCACC +
Preference number: 4 (lower is better)
Translates to: TCGKIYISHPECKAGTKVLDDCL*KGLKPT
Trigger: GGTGGGTTTAAGGCCCTTTCACAGACAATCATCCAA...TACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp CTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTATTCTGCACCAAGTGCTAAGGAATaGGGTTTTGTGGGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: LVNAHCCFTGDTTLLYSAPSAKE*GFVGRV
Trigger: AACTCTACCCACAAAACCTCATTCCTTAGCACTTGG...TGCAGAATAGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGAAAAGCAGAGGCTGTTaGTTCACCCAAGTGACAAAG +
Preference number: 4 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMKSRGC*FTQVTK
Trigger: CTTTGTCACTTGGGTGAATCAACAGCCTCTGCTTTT...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp CCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGCCACTTTAATTTTAATCCTCGGCTCAAGTaGTCCTCTTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PFIHMWGLMQFTSRHFNFNPRLK*SSCLGL
Trigger: GAGGCCAAGGCAAGAGGATCACTTGAGCCGAGGATT...AAAATTAAAGTGGCGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS-3UTR GCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGCTCTTCATAGTTGTCTaGGGCTGGGCTGATTGTGGC +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQLFIVV*GWADCG
Trigger: GCCACAATCAGCCCAGCCGCAGACAACTATGAAGAG...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGTTCTCGGATCACTTTTaGGTTGGGGTCCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: RVICIRSSPANMVKGEPLFSDHF*VGVLIH
Trigger: GTGAATGAGGACCCCAACGCAAAAGTGATCCGAGAA...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCATCTTGAGAGGTATCTaGACCCACCCTGGTGTGATC +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCILRGI*THPGVI
Trigger: GATCACACCAGGGTGGGTGCAGATACCTCTCAAGAT...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGGTTCACACAGGACCTTaGATTTTCTTTTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLVHTGP*IFFWSE
Trigger: CTCACTCCAAAAGAAAATGCAAGGTCCTGTGTGAAC...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAACTCAGCCAGGAAGTTTaGTTCCCTCACCAAGGTATT +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRELSQEV*FPHQGI
Trigger: AATACCTTGGTGAGGGAAGCAAACTTCCTGGCTGAG...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ACCTGTGGCAAAATATATATAAGCCATCCTGAATGCAAGGCTGGCACCAAGGTACTCAGCCAGGAAGTTTaGTTCCCTCACCAAGGTATT +
Preference number: 4 (lower is better)
Translates to: TCGKIYISHPECKAGTKVLSQEV*FPHQGI
Trigger: AATACCTTGGTGAGGGAAGCAAACTTCCTGGCTGAG...TACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp ATGCAGCAGCCAATTCTGCAGGCCAGAGTTAAACTACTGGAGAGATATGACAGGGCTGATGATAGGGACTaGATACTGAAGTTTCACATC +
Preference number: 4 (lower is better)
Translates to: MQQPILQARVKLLERYDRADDRD*ILKFHI
Trigger: GATGTGAAACTTCAGTATGCAGTCCCTATCATCAGC...CCTGTCATATCTCTCCAGTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGGCAGTGTCCCTGAATaGTGCACAGGTTTCACCGTG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPGSVPE*CTGFTV
Trigger: CACGGTGAAACCTGTGCAGCATTCAGGGACACTGCC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGTCAGCCCTACCCACTaGTCCACAAGCTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLVSPTH*STSWAS
Trigger: GGAAGCCCAGCTTGTGGAGCAGTGGGTAGGGCTGAC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGCTCTATCTCCTCAGTTaGCTTTGGTATATTGGATAC +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGLYLLS*LWYIGY
Trigger: GTATCCAATATACCAAAGGCAACTGAGGAGATAGAG...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGGGCTTTGGTGGAAAGTaGTTCTTTGACTGTGACGGC +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQGFGGK*FFDCDG
Trigger: GCCGTCACAGTCAAAGAAGCACTTTCCACCAAAGCC...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGCTATCCTTTTCTTATaGTCCTCTTTTACAGGCATT +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASAILFL*SSFTGI
Trigger: AATGCCTGTAAAAGAGGAGCATAAGAAAAGGATAGC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTTTCCTGAGGGTACAATaGAGCCAGGGTTATGTGCCT +
Preference number: 4 (lower is better)
Translates to: LKPTTRQYDRNGSGTYNLFLRVQ*SQGYVP
Trigger: AGGCACATAACCCTGGCTGCATTGTACCCTCAGGAA...AAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp GCAACAACAAACAAGAGATTCTACCATGACTCTGCATGCTTGAGAAAGAGGAATGCATGCTGCTGCCATTaGTTCCTGAGGGTACAATGC +
Preference number: 4 (lower is better)
Translates to: ATTNKRFYHDSACLRKRNACCCH*FLRVQC
Trigger: GCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGC...ATTCCTCTTTCTCAAGCATGCAGAGTCATGGTAGAATCTCTTGTTTGTTGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGCTACTGGCATGCTGCTaGCATTGCTTCCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQLLACC*HCFLRV
Trigger: TACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAG...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259711.11
CDS-3UTR GCA 90 bp TTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTGTGTTCTACTGGCATaGTGCTGCCATTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LNPPPGNMTEMVPELTIFCVLLA*CCHCFL
Trigger: CAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACA...GAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGTGCTCGGTGGAGTCTaGATCCTTCGTCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPVLGGV*ILRLNG
Trigger: GCCATTCAGACGAAGGATGCAGACTCCACCGAGCAC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCAGTTTTTCTCAGGGATaGTCTGGGATGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCSFSQG*SGMMGS
Trigger: GGAGCCCATCATCCCAGAGCATCCCTGAGAAAAACT...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGAACATGAGCCAGTCCTaGACAGTGATTTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLNMSQS*TVIWSF
Trigger: AAAACTCCAAATCACTGTGCAGGACTGGCTCATGTT...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGTTCTCTAACTTGGAATaGAGCTGGCTGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQFSNLE*SWLGWW
Trigger: CCACCACCCCAGCCAGCTGCATTCCAAGTTAGAGAA...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTATGAAATATGGTAGATaGTACCAGAACACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASMKYGR*YQNTLG
Trigger: TCCCAAAGTGTTCTGGTAGCATCTACCATATTTCAT...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTGCGTTAATGCACACTGCTaGTTCACAGGTGACACAACT +
Preference number: 4 (lower is better)
Translates to: QSSSHVCYCVLLACCCHCVNAHC*FTGDTT
Trigger: AGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAAC...GCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp GGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTTATGACTGTCTACTCCCTTTaGGGTCTAAAAGATCCCGAA +
Preference number: 4 (lower is better)
Translates to: GAGGRPKNIAVRFLSVLMTVYSL*GLKDPE
Trigger: TTCGGGATCTTTTAGACCCCAAAGGGAGTAGACAGT...CATAAGCACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGCCCTTGCCAGCTGCCTaGTCAGCCAGTGATGATATA +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQPLPAA*SASDDI
Trigger: TATATCATCACTGGCTGACCAGGCAGCTGGCAAGGG...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCTGCATATCTTAATGTaGAGAGGGTCTCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGLHILM*RGSLHS
Trigger: ACTATGAAGAGACCCTCTCCACATTAAGATATGCAG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGGATCACTTTTGCGTTaGGGTCCTCATTCACAACAG +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREGSLLR*GPHSQQ
Trigger: CTGTTGTGAATGAGGACCCCAACGCAAAAGTGATCC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGTATCTGCACCCACCCTaGTGTGATCCTTTAAATAAT +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVYLHPP*CDPLNN
Trigger: ATTATTTAAAGGATCACACCAGGGTGGGTGCAGATA...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTATCTGCACCCACCCTaGTGTGATCCTTTAAATAAT +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGYLHPP*CDPLNN
Trigger: ATTATTTAAAGGATCACACCAGGGTGGGTGCAGATA...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCTCACCATGCCACAGCTaGGTGGTACTGCACACAAGG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPSPCHS*VVLHTR
Trigger: CCTTGTGTGCAGTACCACCCAGCTGTGGCATGGTGA...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAACCTCACTTGGATAGCTaGTTCACTCACTATTGCACC +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREPHLDS*FTHYCT
Trigger: GGTGCAATAGTGAGTGAACCAGCTATCCAAGTGAGG...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGTCTCCAGCTTCTCAATaGTCCACACTTGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQSPASQ*STLGCS
Trigger: AGAGCACCCAAGTGTGGACCATTGAGAAGCTGGAGA...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCCTCCACCACACGCTCTaGAACAGCTCCTGTAACACG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPLHHTL*NSSCNT
Trigger: CGTGTTACAGGAGCTGTTCCAGAGCGTGTGGTGGAG...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGGCTCCCACTTTCACTaGAATTCTCCGAAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREGSHFH*NSPKSH
Trigger: ATGACTCTTCGGAGAATTCCAGTGAAAGTGGGAGCC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCTTTCCAGCACACCGGTaGCCCCATACTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPFPAHR*PHTSMA
Trigger: GGCCATTGAAGTATGGGGCCACCGGTGTGCTGGAAA...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAATCGACCTCCCAGATaGAGCTGCCATTTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQNRPPR*SCHFQH
Trigger: GTGCTGGAAATGGCAGCTCCATCTGGGAGGTCGATT...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGGAGTTTGGTGGACCTaGCAGTTACACAGCCGATGG +
Preference number: 4 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLGVWWT*QLHSRW
Trigger: CCATCGGCTGTGTAACTGCCAGGTCCACCAAACTCC...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGAGGAGTTTGGTGGACCTaGCAGTTACACAGCCGATGG +
Preference number: 4 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRGVWWT*QLHSRW
Trigger: CCATCGGCTGTGTAACTGCCAGGTCCACCAAACTCC...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACCTCTTTGGAGTTTGGTaGACCTGGCAGTTACACAGC +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNLFGVW*TWQLHS
Trigger: GCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAG...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGCACTGCTCCACAAGCTaGGCTTCCCGCTCCACATCG +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLHCSTS*ASRSTS
Trigger: CGATGTGGAGCGGGAAGCCCAGCTTGTGGAGCAGTG...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGATCGAGGAAGAGAACTaGTATGTGGGTTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMIEEEN*YVGFHS
Trigger: GGAATGGAAACCCACATACCAGTTCTCTTCCTCGAT...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGGCTGCCATGCTCCTTaGGCAGGATGGAGTTCACGC +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLGCHAP*AGWSSR
Trigger: GCGTGAACTCCATCCTGCCCAAGGAGCATGGCAGCC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCAAATCCCAAGAGGCTGTaGCTGAAACCTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSNPKRL*LKPHHH
Trigger: GTGATGATGAGGTTTCAGCCACAGCCTCTTGGGATT...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCGTCCAACTGGTTCTCTaGCCAACCCTTGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCVQLVL*PTLVIF
Trigger: GAAGATGACAAGGGTTGGCCAGAGAACCAGTTGGAC...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTTCGAGGAGAATCCCTaGGTAAAGTTCCATAACATG +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLFEENP*VKFHNM
Trigger: CATGTTATGGAACTTTACCCAGGGATTCTCCTCGAA...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGTGTGGAGTGCTCGGTaGAGTCTGCATCCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPVWSAR*SLHPSS
Trigger: AGACGAAGGATGCAGACTCCACCGAGCACTCCACAC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGATCATGCACAAGCGATaGTGTGGAGTGCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQIMHKR*CGVLGG
Trigger: TCCACCGAGCACTCCACACCATCGCTTGTGCATGAT...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGGTCTTCAAGGATGTTaGTGGTGTGTTCTACCGTCA +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREGLQGC*WCVLPS
Trigger: TGACGGTAGAACACACCACCAACATCCTTGAAGACC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGCTGTCACAAACAACTaGATGAATCTTTCCTACCAA +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGAVTNN*MNLSYQ
Trigger: TTGGTAGGAAAGATTCATCCAGTTGTTTGTGACAGC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTATTCTGCAAGGAATGAGGTTTTGTaGGTAGAGTTTCAGCCTACC +
Preference number: 4 (lower is better)
Translates to: LVNAHCCFTGDTTLLYSARNEVL*VEFQPT
Trigger: GGTAGGCTGAAACTCTACCCACAAAACCTCATTCCT...TGCAGAATAGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR CAA 72 bp GTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATaGTGTTCTACTGGCATGCTGCTGCCATTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: VPELTIFFSRLL*CSTGMLLPLLP
Trigger: AGGAAGCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR CAA 72 bp CGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTaGCAGTCAAACATACATGTTCACACAAAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: RGLVAKGIMAPN*QSNIHVHTKEW
Trigger: CCACTCTTTTGTGTGAACATGTATGTTTGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGCTTCCCCAAGGCACTTaGAAACCACTTCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQLPQGT*KPLLDQ
Trigger: CTGGTCAAGAAGTGGTTTTCAAGTGCCTTGGGGAAG...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGAACTTTAAAGGTCTGTaGCTCATTTTGCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVNFKGL*LILLQR
Trigger: TCTTTGGAGCAAAATGAGTCACAGACCTTTAAAGTT...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGCTAGTGACAGCTAGTTaGGATAAACCATCTACATAT +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGLVTAS*DKPSTY
Trigger: ATATGTAGATGGTTTATCTCAACTAGCTGTCACTAG...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGTGTCATCCCCCACCTTaGTACCGGACATCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLCHPPP*YRTSPG
Trigger: CCCTGGAGATGTCCGGTATCAAGGTGGGGGATGACA...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACAAAAGCTGGATATCTTaGGAGGTATCTGCACCCACC +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNKSWIS*EVSAPT
Trigger: GGTGGGTGCAGATACCTCTCAAGATATCCAGCTTTT...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCCATTCGCCACCCCGATaGGGTTGTGATTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPHSPPR*GCDFLG
Trigger: CCCAAGAAAATCACAACCTCATCGGGGTGGCGAATG...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGCTTTTTGACTCGGTaGATGATTTCCCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQSFLTR*MISPLL
Trigger: CAGCAGCGGGGAAATCATTCACCGAGTCAAAAAGCT...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTGCGTGCTCCATCTGAAATaGACTCCAGAAATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QSSSHVCYCVLLACCCHCVLHLK*TPEILL
Trigger: CAGAAGAATTTCTGGAGTTCATTTCAGATGGAGCAC...GCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGGCACAGGTTTCACCGTaGCTTGTACTCTACGGGAAT +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQAQVSP*LVLYGN
Trigger: ATTCCCGTAGAGTACAAGTCACGGTGAAACCTGTGC...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACGCAGGGTGGCTGAGTTaGACTGTGGTTTTCACAATT +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNAGWLS*TVVFTI
Trigger: AATTGTGAAAACCACAGTTCAACTCAGCCACCCTGC...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACCTGACGGTTAAGGCATaGGGAGTCTCTGATGTACAA +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNLTVKA*GVSDVQ
Trigger: TTGTACATCAGAGACTCCTCATGCCTTAACCGTCAG...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTAAAAACTTTGGTGGCTaGGGAGAGAATGCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGKNFGG*GENALK
Trigger: TTTTAAAGCATTCTCTCCTCAGCCACCAAAGTTTTT...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGAAAATCTTTTCCCTCTaGCACTCCCATAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGKIFSL*HSHKFC
Trigger: ACAGAATTTATGGGAGTGTCAGAGGGAAAAGATTTT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AGGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTAAACATGGTAAAGGGTaGACCATTGAACTTCATAGC +
Preference number: 4 (lower is better)
Translates to: RWRGRWKTKEYSCEISQCKHGKG*TIELHS
Trigger: GCTATGAAGTTCAATGGTTCACCCTTTACCATGTTT...ACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGTTTCAGTCGCTCTCCTaGAGCTCCTGTTTTAGATAC +
Preference number: 4 (lower is better)
Translates to: RVICIRSSPANMVKGEPLFQSLS*SSCFRY
Trigger: GTATCTAAAACAGGAGCTGCAGGAGAGCGACTGAAA...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAATTTCAGTCGCTCTCCTaGAGCTCCTGTTTTAGATAC +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREFQSLS*SSCFRY
Trigger: GTATCTAAAACAGGAGCTGCAGGAGAGCGACTGAAA...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCTACTGCACACAAGGGTaGCGTTCACACAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPYCTQG*RSHRTL
Trigger: CAAGGTCCTGTGTGAACGGCACCCTTGTGTGCAGTA...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCTCATACATGAGCCGCTaGTCCTCTAGGGCACTTCTC +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPSYMSR*SSRALL
Trigger: GAGAAGTGCCCTAGAGGAGCAGCGGCTCATGTATGA...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGAGCTGCTGGCGGAGTTaGTCCAGTTCCCGCTCATAC +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLSCWRS*SSSRSY
Trigger: GTATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCT...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp TTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTAGCTTTAACCAGCTaGTCTCGCAGTTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LNPPPGNMTEMVPELTIFLALTS*SRSFAR
Trigger: CCTGGCAAAACTGCGAGAGCAGCTGGTTAAAGCTAA...GAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGCCTGCAACCTCCCCCTaGTGGCTGATGATAGGGACT +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLPATSP*WLMIGT
Trigger: AGTCCCTATCATCAGCCAGCAGGGGGAGGTTGCAGG...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGCTCTATCTCCTCAGTTaGCTTTGGTATATTGGATAC +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLLYLLS*LWYIGY
Trigger: GTATCCAATATACCAAAGGCAACTGAGGAGATAGAG...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AGGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTCTCTATCTCCTCAGTTaGCTTTGGTATATTGGATAC +
Preference number: 4 (lower is better)
Translates to: RWRGRWKTKEYSCEISQCLYLLS*LWYIGY
Trigger: GTATCCAATATACCAAAGGCAACTGAGGAGATAGAG...ACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTCTCCCCATCTGATGTaGCTTCGTTTTCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNSPHLM*LRFHSL
Trigger: CAAGGAGTGAAAACGAAGGCACATCAGATGGGGAGA...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp ATGTCCACATGCAGCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACGCTATCCTTTTCTTATaGTCCTCTTTTACAGGCATT +
Preference number: 4 (lower is better)
Translates to: MSTCSTQLVNAHCCFTGDAILFL*SSFTGI
Trigger: AATGCCTGTAAAAGAGGAGCATAAGAAAAGGATAGC...GTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGCTGCATGTGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGGCTATCCTTTTCTTATaGTCCTCTTTTACAGGCATT +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGAILFL*SSFTGI
Trigger: AATGCCTGTAAAAGAGGAGCATAAGAAAAGGATAGC...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGTGTGTTCTACTGGCATaGTGCTGCCATTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQCVLLA*CCHCFL
Trigger: CAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACA...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259711.11
CDS-3UTR GCA 90 bp ATGCAGCAGCCAATTCTGCAGGCCAGAGTTAAACTACTGGAGAGATATGACAGGTCTTCTTCTCACGTTTaGTATTGTGTTCTACTGGCA +
Preference number: 4 (lower is better)
Translates to: MQQPILQARVKLLERYDRSSSHV*YCVLLA
Trigger: TGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGA...CCTGTCATATCTCTCCAGTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGACGGCCTGAAATCATaGACAAGCGATGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPDGLKS*TSDGVE
Trigger: CTCCACACCATCGCTTGTGCATGATTTCAGGCCGTC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTAACTCTGCTCTATTCTaGATAGTACAGACAAGTCAA +
Preference number: 4 (lower is better)
Translates to: ALSLLMHTAASQVTQLCSNSALF*IVQTSQ
Trigger: TTGACTTGTCTGTACTATGCAGAATAGAGCAGAGTT...AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp CAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTGCTACCATGACTCTGCATaGTTGAGAAAGAGGAATTCG +
Preference number: 4 (lower is better)
Translates to: QSSSHVCYCVLLACCCHCYHDSA*LRKRNS
Trigger: CGAATTCCTCTTTCTCAAGCATGCAGAGTCATGGTA...GCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGAGGAGGGGTGCTTGCTaGTCTCACCGTGAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: RSPVPYDFLQITFICILVRRGAC*SHREVV
Trigger: CACAACCTCACGGTGAGAGCAGCAAGCACCCCTCCT...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGATGTTGAACACAGCATaGGAGCGGCTGCTTTCTTCG +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQMLNTA*ERLLSS
Trigger: CGAAGAAAGCAGCCGCTCCCATGCTGTGTTCAACAT...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGAACCACATTTTGAACTaGGTCATTACTATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGNHILN*VITIQG
Trigger: ACCCTGAATAGTAATGACCCAGTTCAAAATGTGGTT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACCCTCACTTGGATAGCTaGTTCACTCACTATTGCACC +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNPHLDS*FTHYCT
Trigger: GGTGCAATAGTGAGTGAACCAGCTATCCAAGTGAGG...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGTCTCCAGCTTCTCAATaGTCCACACTTGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQSPASQ*STLGCS
Trigger: AGAGCACCCAAGTGTGGACCATTGAGAAGCTGGAGA...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGGGCCCCATACTTCAATaGCCAGTGCTCCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQGPILQ*PVLHLK
Trigger: TTTCAGATGGAGCACTGGCCATTGAAGTATGGGGCC...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGCAGTTACACAGCCGATaGATACTGACAGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQQLHSR*ILTGWL
Trigger: AAGCCATCCTGTCAGTATCCATCGGCTGTGTAACTG...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp ACCTGTGGCAAAATATATATAAGCCATCCTGAATGCAAGGCTGGCACCAAGGTAAAGAGAACTGGTATGTaGGTTTCCATTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: TCGKIYISHPECKAGTKVKRTGM*VSIPGG
Trigger: ACCTCCTGGAATGGAAACCCACATACCAGTTCTCTT...TACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAAAAGGTCCGGTCGGCTaGAAGAGACATTATGAACAT +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREKGPVG*KRHYEH
Trigger: ATGTTCATAATGTCTCTTCCAGCCGACCGGACCTTT...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCTCAGACATGTCCAACTaGTTCTCTGGCCAACCCTTG +
Preference number: 4 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFSDMSN*FSGQPL
Trigger: CAAGGGTTGGCCAGAGAACCAGTTGGACATGTCTGA...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGTCAGACATGTCCAACTaGTTCTCTGGCCAACCCTTG +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQSDMSN*FSGQPL
Trigger: CAAGGGTTGGCCAGAGAACCAGTTGGACATGTCTGA...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGCTTGAAAAACTTTGGTaGCTGAGGAGAGAATGCTTT +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLLEKLW*LRRECF
Trigger: AAAGCATTCTCTCCTCAGCCACCAAAGTTTTTCAAG...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCCAGACAGGGTGGCATTaGAGGCACTGTGGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPQTGWH*RHCGKS
Trigger: ACTTTTCCCACAGTGCCTCCAATGCCACCCTGTCTG...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCATGATGGGCTCCCTTTaGCTAAGGCACTGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCMMGSL*LRHCFP
Trigger: AGGAAAACAGTGCCTTAGCCAAAGGGAGCCCATCAT...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGCTTCAAGGATGTTGGTaGTGTGTTCTACCGTCACCT +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQLQGCW*CVLPSP
Trigger: AGGTGACGGTAGAACACACCACCAACATCCTTGAAG...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGAATTCTGTGAAAGAATaGTCTTCAAGGATGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVNSVKE*SSRMLV
Trigger: CACCAACATCCTTGAAGACCATTCTTTCACAGAATT...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGAACTTGGAATGCAGCTaGCTGGGGTGGTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLNLECS*LGWWSP
Trigger: TGGGCTCCACCACCCCAGCCAGCTGCATTCCAAGTT...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTTCTGGAATTATTACCTaGTCATTCTCTAACTTGGAA +
Preference number: 4 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASSGIIT*SFSNLE
Trigger: TTCCAAGTTAGAGAATGACCAGGTAATAATTCCAGA...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
3UTR CAA 72 bp GAAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTaGCTATTGTGTTCTACTGGCATGCTGCTGCCATTG +
Preference number: 4 (lower is better)
Translates to: EMVPELTIFFSR*LLCSTGMLLPL
Trigger: CAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
3UTR CAA 72 bp CGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATaGAACTTCATAGCTCAGTCCATCTCCTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: RSSPANMVKGEP*NFIAQSISSAF
Trigger: AAATGCTGAGGAGATGGACTGAGCTATGAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGAACTTTAAAGGTCTGTaGCTCATTTTGCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLNFKGL*LILLQR
Trigger: TCTTTGGAGCAAAATGAGTCACAGACCTTTAAAGTT...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAAAAGCTGGATATCTTaGGAGGTATCTGCACCCACC +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQKSWIS*EVSAPT
Trigger: GGTGGGTGCAGATACCTCTCAAGATATCCAGCTTTT...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTTCACTTGGTAATCGGTaGGTTTGCTCATTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LKPTTRQYDRNGSGTYNLSLGNR*VCSFPQ
Trigger: CTGAGGAAATGAGCAAACTCACCGATTACCAAGTGA...AAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAATAGGGACTGCATACTaGAGTTTCACATCACAGAAG +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREIGTAY*SFTSQK
Trigger: CTTCTGTGATGTGAAACTTCAGTATGCAGTCCCTAT...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGAACAGCCGATGGATACTaGCAGGATGGCTTCAACCAT +
Preference number: 4 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRTADGY*QDGFNH
Trigger: ATGGTTGAAGCCATCCTGTCAGTATCCATCGGCTGT...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCTTTAATGAGTGCATCTaGCCACCTCTCCCTTACGCA +
Preference number: 4 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFFNECI*PPLPYA
Trigger: TGCGTAAGGGAGAGGTGGTCAGATGCACTCATTAAA...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGCTGCTCATTGGCACTaGGGTCATCCGCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPAAHWH*GHPHSN
Trigger: ATTTGAATGCGGATGACCTCAGTGCCAATGAGCAGC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCTGCTCATTGGCACTaGGGTCATCCGCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLAAHWH*GHPHSN
Trigger: ATTTGAATGCGGATGACCTCAGTGCCAATGAGCAGC...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAACATCACTGTGCTTTATaGTGGGCAGGTAGAAAAACT +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREHHCAL*WAGRKT
Trigger: AGTTTTTCTACCTGCCCATCATAAAGCACAGTGATG...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTCTTCAAACTCTGCGTaGAACTCTGTTTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLSSNSA*NSVCCK
Trigger: TTTACAACAAACAGAGTTTCACGCAGAGTTTGAAGA...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGTACGTCTCCCCATCTaGTGTGCCTTCGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPVRLPI*CAFVFT
Trigger: AGTGAAAACGAAGGCACATCAGATGGGGAGACGTAC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGCTGGAAGAGACATTATaGACATTTGGTGTACTGAGG +
Preference number: 4 (lower is better)
Translates to: RVICIRSSPANMVKGEPLLEETL*TFGVLR
Trigger: CCTCAGTACACCAAATGTTCATAATGTCTCTTCCAG...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCAGGCATGAGGAGTCTCTaGTGTACAACCTTCTTTATT +
Preference number: 4 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSGMRSL*CTTFFI
Trigger: AATAAAGAAGGTTGTACATCAGAGACTCCTCATGCC...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGCAGGCATTAGGGGCTTaGAAAACTTTGGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLQALGA*KTLVAE
Trigger: CTCAGCCACCAAAGTTTTTCAAGCCCCTAATGCCTG...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGTCTGCATCCTTCGTCTaGATGGCCAGCTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLSASFV*MASWSE
Trigger: CTCAGACCAGCTGGCCATTCAGACGAAGGATGCAGA...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGCCAGTCCTGCACAGTaGTTTGGAGTTTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPASPAQ*FGVFLR
Trigger: CCTGAGAAAAACTCCAAATCACTGTGCAGGACTGGC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGTTAGACATACTCATTaGCAGCACAGAACCCAAAAG +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREVRHTH*QHRTQK
Trigger: CTTTTGGGTTCTGTGCTGTCAATGAGTATGTCTAAC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTATTCTGCACACTCTTATTACATGTaGGTAATGCAGCAGCCAATT +
Preference number: 4 (lower is better)
Translates to: LVNAHCCFTGDTTLLYSAHSYYM*VMQQPI
Trigger: AATTGGCTGCTGCATTACTCACATGTAATAAGAGTG...TGCAGAATAGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGCACCACCAGGCAATATaGCAGAAATGGTTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLHHQAI*QKWFRN
Trigger: GTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTG...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp CCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGCCACTTTAATTTTTTCATATGTGGGGTCTaGTGCAATTCACCTCACGCC +
Preference number: 4 (lower is better)
Translates to: PFIHMWGLMQFTSRHFNFFICGV*CNSPHA
Trigger: GGCGTGAGGTGAATTGCATCAGACCCCACATATGAA...AAAATTAAAGTGGCGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS-3UTR GCA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTACCTGTCTGTCCATATaGAAAAATACACGCATTATA +
Preference number: 4 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGTCLSI*KNTRII
Trigger: TATAATGCGTGTATTTTTGCATATGGACAGACAGGT...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGGAATAAGGCCCAGCTaGTCAGCATGGCCCATCATG +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLGIRPS*SAWPIM
Trigger: CATGATGGGCCATGCTGAGCAGCTGGGCCTTATTCC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGCTCAGCCAGGAAGTTTaGTTCCCTCACCAAGGTATT +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQLSQEV*FPHQGI
Trigger: AATACCTTGGTGAGGGAAGCAAACTTCCTGGCTGAG...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCTGGTTCACTCACTATTaGACCTCTCTTCCTATTGGC +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCWFTHY*TSLPIG
Trigger: GCCAATAGGAAGAGAGGTGCAATAGTGAGTGAACCA...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGCTGATGATAGGGACTaGATACTGAAGTTTCACATC +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREADDRD*ILKFHI
Trigger: GATGTGAAACTTCAGTATGCAGTCCCTATCATCAGC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ACCTGTGGCAAAATATATATAAGCCATCCTGAATGCAAGGCTGGCACCAAGGTATCATTCCACCTGTCATaGAGTGTTCTTGTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: TCGKIYISHPECKAGTKVSFHLS*SVLVLA
Trigger: TGCTAAGACAAGAACACTGCATGACAGGTGGAATGA...TACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGGGCAGTGTCCCTGAATaGTGCACAGGTTTCACCGTG +
Preference number: 4 (lower is better)
Translates to: RSPVPYDFLQITFICILVGSVPE*CTGFTV
Trigger: CACGGTGAAACCTGTGCAGCATTCAGGGACACTGCC...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGTGGGGGCCAACAAGCTaGTCATTGGCACTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: RSPVPYDFLQITFICILVWGPTS*SLALRS
Trigger: TGACCTCAGTGCCAATGAGCAGCTTGTTGGCCCCCA...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGTCTCCCCATCTGATGTaGCTTCGTTTTCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQSPHLM*LRFHSL
Trigger: CAAGGAGTGAAAACGAAGGCACATCAGATGGGGAGA...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGGCTTTGGTGGAAAGTaGTTCTTTGACTGTGACGGC +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPGFGGK*FFDCDG
Trigger: GCCGTCACAGTCAAAGAAGCACTTTCCACCAAAGCC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGAGGCTCCTCCGAATGTaGCGGGCTTTGGTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLRLLRM*RALVES
Trigger: ACTTTCCACCAAAGCCCGGCACATTCGGAGGAGCCT...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGAGGCTCCTCCGAATGTaGCGGGCTTTGGTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: RSPVPYDFLQITFICILVRLLRM*RALVES
Trigger: ACTTTCCACCAAAGCCCGGCACATTCGGAGGAGCCT...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCTTCCTGAGGGTACAATaGAGCCAGGGTTATGTGCCT +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPFLRVQ*SQGYVP
Trigger: AGGCACATAACCCTGGCTGCATTGTACCCTCAGGAA...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259711.11
CDS-3UTR GCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGTGCTCGGTGGAGTCTaGATCCTTCGTCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLVLGGV*ILRLNG
Trigger: GCCATTCAGACGAAGGATGCAGACTCCACCGAGCAC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGTTTTTCTCAGGGATaGTCTGGGATGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPSFSQG*SGMMGS
Trigger: GGAGCCCATCATCCCAGAGCATCCCTGAGAAAAACT...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGTTCCCAAAACAGACTTaGTCTCCGACAGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQFPKQT*SPTETA
Trigger: AGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAA...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp GCAACAACAAACAAGAGATTCTACCATGACTCTGCATGCTTGAGAAAGAGGAATATAAGCCATCCTGAATaGAAGGCTGGCACCAAGGTA +
Preference number: 4 (lower is better)
Translates to: ATTNKRFYHDSACLRKRNISHPE*KAGTKV
Trigger: TACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTAT...ATTCCTCTTTCTCAAGCATGCAGAGTCATGGTAGAATCTCTTGTTTGTTGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGCGGCAACTTTTACCTTaGTATCCGACATGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQRQLLP*YPTCWL
Trigger: CAGCCAACATGTCGGATACCAAGGTAAAAGTTGCCG...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGCAGCATGGCCCATCATaGAAAAGGATTTTCCCGAAC +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQQHGPS*KRIFPN
Trigger: GTTCGGGAAAATCCTTTTCCATGATGGGCCATGCTG...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGGTTCACAATCCTTTTaGCTCGGTCTGCATATCTTA +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREGSQSF*LGLHIL
Trigger: TAAGATATGCAGACCGAGCCAAAAGGATTGTGAACC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCTCTCCAGCTTCTCAATaGTCCACACTTGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPSPASQ*STLGCS
Trigger: AGAGCACCCAAGTGTGGACCATTGAGAAGCTGGAGA...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGGGCTCCCACTTTCACTaGAATTCTCCGAAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQGSHFH*NSPKSH
Trigger: ATGACTCTTCGGAGAATTCCAGTGAAAGTGGGAGCC...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGGAGTTTGGTGGACCTaGCAGTTACACAGCCGATGG +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLGVWWT*QLHSRW
Trigger: CCATCGGCTGTGTAACTGCCAGGTCCACCAAACTCC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCCTCTTTGGAGTTTGGTaGACCTGGCAGTTACACAGC +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPLFGVW*TWQLHS
Trigger: GCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAG...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCACTGTCCAGCCCTCTTTaGAGTTTGGTGGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSALSSPL*SLVDLA
Trigger: TGCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAG...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACAAGAGAACTGGTATGTaGGTTTCCATTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNKRTGM*VSIPGG
Trigger: ACCTCCTGGAATGGAAACCCACATACCAGTTCTCTT...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTGCAATCCTTTCATTCTGTaGTGTGACCCTATTCAAGTG +
Preference number: 4 (lower is better)
Translates to: QSSSHVCYCVLLACCCHCNPFIL*CDPIQV
Trigger: CACTTGAATAGGGTCACACCACAGAATGAAAGGATT...GCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCTCAGACATGTCCAACTaGTTCTCTGGCCAACCCTTG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPSDMSN*FSGQPL
Trigger: CAAGGGTTGGCCAGAGAACCAGTTGGACATGTCTGA...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGTCAGACATGTCCAACTaGTTCTCTGGCCAACCCTTG +
Preference number: 4 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLSDMSN*FSGQPL
Trigger: CAAGGGTTGGCCAGAGAACCAGTTGGACATGTCTGA...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGTTCGAGGAGAATCCCTaGGTAAAGTTCCATAACATG +
Preference number: 4 (lower is better)
Translates to: RVICIRSSPANMVKGEPLFEENP*VKFHNM
Trigger: CATGTTATGGAACTTTACCCAGGGATTCTCCTCGAA...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTTATGCTTGAAAAACTTTGGTaGCTGAGGAGAGAATGCTTT +
Preference number: 4 (lower is better)
Translates to: GAGGRPKNIAVRFLSVLMLEKLW*LRRECF
Trigger: AAAGCATTCTCTCCTCAGCCACCAAAGTTTTTCAAG...CATAAGCACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGAATTCTGTGAAAGAATaGTCTTCAAGGATGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLNSVKE*SSRMLV
Trigger: CACCAACATCCTTGAAGACCATTCTTTCACAGAATT...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAACCAAAAGGCTGCCTCTaGAATTATTACCTGGTCATT +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREPKGCL*NYYLVI
Trigger: AATGACCAGGTAATAATTCCAGAGGCAGCCTTTTGG...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAACACGCATTATACCCCTaGAAGGCTTTTTCAAGAATT +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREHALYP*KAFSRI
Trigger: AATTCTTGAAAAAGCCTTTCAGGGGTATAATGCGTG...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGGTCTGCATTCAGATTaGCTAAGTAGCATTTGTCAT +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREGLHSD*LSSICH
Trigger: ATGACAAATGCTACTTAGTCAATCTGAATGCAGACC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGCATTCGCCACCCCGATaGGGTTGTGATTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLHSPPR*GCDFLG
Trigger: CCCAAGAAAATCACAACCTCATCGGGGTGGCGAATG...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACATAGGGACTGCATACTaGAGTTTCACATCACAGAAG +
Preference number: 4 (lower is better)
Translates to: VICIRSSPANMVKGEPLNIGTAY*SFTSQK
Trigger: CTTCTGTGATGTGAAACTTCAGTATGCAGTCCCTAT...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCGTGCTCCATCTGAAATaGACTCCAGAAATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCVLHLK*TPEILL
Trigger: CAGAAGAATTTCTGGAGTTCATTTCAGATGGAGCAC...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAAAGTGGCAGTGTCCCTaGATGCTGCACAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAKWQCP*MLHRFH
Trigger: GTGAAACCTGTGCAGCATTCAGGGACACTGCCACTT...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGCCAAGAGGCTGTGGCTaGAACCTCATCATCACTGTG +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLPRGCG*NLIITV
Trigger: CACAGTGATGATGAGGTTTCAGCCACAGCCTCTTGG...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGTTTCATTCTGTGGTGTaGCCCTATTCAAGTGAACAG +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQFHSVV*PYSSEQ
Trigger: CTGTTCACTTGAATAGGGTCACACCACAGAATGAAA...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCAGGGTGGCTGAGTTaGACTGTGGTTTTCACAATT +
Preference number: 4 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLAGWLS*TVVFTI
Trigger: AATTGTGAAAACCACAGTTCAACTCAGCCACCCTGC...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAGAACATTTGGTGTACTaGGGCTCCTCCGAATGTGCC +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAEHLVY*GSSECA
Trigger: GGCACATTCGGAGGAGCCTCAGTACACCAAATGTTC...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGACTGACGGTTAAGGCATaGGGAGTCTCTGATGTACAA +
Preference number: 4 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRLTVKA*GVSDVQ
Trigger: TTGTACATCAGAGACTCCTCATGCCTTAACCGTCAG...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCCTGACGGTTAAGGCATaGGGAGTCTCTGATGTACAA +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPLTVKA*GVSDVQ
Trigger: TTGTACATCAGAGACTCCTCATGCCTTAACCGTCAG...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GCAACAACAAACAAGAGATTCTACCATGACTCTGCATGCTTGAGAAAGAGGAATATATATAAGCCATCCTaGATGCAAGGCTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: ATTNKRFYHDSACLRKRNIYKPS*MQGWHQ
Trigger: TTGGTGCCAGCCTTGCATTCAGGATGGCTTATATAT...ATTCCTCTTTCTCAAGCATGCAGAGTCATGGTAGAATCTCTTGTTTGTTGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGACCTGTCTGTCCATATaGAAAAATACACGCATTATA +
Preference number: 4 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLTCLSI*KNTRII
Trigger: TATAATGCGTGTATTTTTGCATATGGACAGACAGGT...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AGGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTACCTGTCTGTCCATATaGAAAAATACACGCATTATA +
Preference number: 4 (lower is better)
Translates to: RWRGRWKTKEYSCEISQCTCLSI*KNTRII
Trigger: TATAATGCGTGTATTTTTGCATATGGACAGACAGGT...ACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCGTTCACACAGGACCTTaGATTTTCTTTTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCVHTGP*IFFWSE
Trigger: CTCACTCCAAAAGAAAATGCAAGGTCCTGTGTGAAC...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGTTCATCCCTCTCTTCTaGCCACTGGGTCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLFIPLF*PLGHLL
Trigger: CAGAAGGTGACCCAGTGGGCAGAAGAGAGGGATGAA...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGCTGCTCTCGCAGTTTTaGCAGGCTTTGTCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLLLSQF*QALSEE
Trigger: CTCTTCCGACAAAGCCTGGCAAAACTGCGAGAGCAG...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGAAAAACTGGCTGCCATaGTCCTTGGGCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLKNWLP*SLGRME
Trigger: CTCCATCCTGCCCAAGGAGCATGGCAGCCAGTTTTT...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCACTCTATCTCCTCAGTTaGCTTTGGTATATTGGATAC +
Preference number: 4 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSLYLLS*LWYIGY
Trigger: GTATCCAATATACCAAAGGCAACTGAGGAGATAGAG...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR GCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAGCATGCTGCTGCCATTaGTTCCTGAGGGTACAATGC +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAACCCH*FLRVQC
Trigger: GCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGC...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502297.5
CDS-3UTR GCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGCAGAACCCAAAAGGCTaGCTCTGGAATTATTACCTG +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQQNPKG*LWNYYL
Trigger: CAGGTAATAATTCCAGAGGCAGCCTTTTGGGTTCTG...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGCCGTGCATGTCCACATaGAGCACTCAGCTTGTTAAT +
Preference number: 4 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLPCMST*STQLVN
Trigger: ATTAACAAGCTGAGTGCTGCATGTGGACATGCACGG...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGCCCAGCTGCTCAGCATaGCCCATCATGGAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLPSCSA*PIMEKD
Trigger: ATCCTTTTCCATGATGGGCCATGCTGAGCAGCTGGG...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGACTGTCTACTCCCTTTaGGGTCTAAAAGATCCCGAA +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQTVYSL*GLKDPE
Trigger: TTCGGGATCTTTTAGACCCCAAAGGGAGTAGACAGT...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGCTGCATATCTTAATGTaGAGAGGGTCTCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: RVICIRSSPANMVKGEPLLHILM*RGSLHS
Trigger: ACTATGAAGAGACCCTCTCCACATTAAGATATGCAG...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAATTCATAGTTATAGTCTaGTTCAGAGGAAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREFIVIV*FRGSLT
Trigger: AGTGAGGCTTCCTCTGAACCAGACTATAACTATGAA...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGCCTCACTTGGATAGCTaGTTCACTCACTATTGCACC +
Preference number: 4 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLPHLDS*FTHYCT
Trigger: GGTGCAATAGTGAGTGAACCAGCTATCCAAGTGAGG...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGCAGTTACACAGCCGATaGATACTGACAGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLQLHSR*ILTGWL
Trigger: AAGCCATCCTGTCAGTATCCATCGGCTGTGTAACTG...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGACAGTTACACAGCCGATaGATACTGACAGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRQLHSR*ILTGWL
Trigger: AAGCCATCCTGTCAGTATCCATCGGCTGTGTAACTG...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAGCCCTCTTTGGAGTTTaGTGGACCTGGCAGTTACAC +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAALFGV*WTWQLH
Trigger: GTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGC...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAAGAGAACTGGTATGTaGGTTTCCATTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQKRTGM*VSIPGG
Trigger: ACCTCCTGGAATGGAAACCCACATACCAGTTCTCTT...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGATCGAGGAAGAGAACTaGTATGTGGGTTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQIEEEN*YVGFHS
Trigger: GGAATGGAAACCCACATACCAGTTCTCTTCCTCGAT...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAATCCCAAGAGGCTGTaGCTGAAACCTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPNPKRL*LKPHHH
Trigger: GTGATGATGAGGTTTCAGCCACAGCCTCTTGGGATT...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGAAATCCCAAGAGGCTGTaGCTGAAACCTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRNPKRL*LKPHHH
Trigger: GTGATGATGAGGTTTCAGCCACAGCCTCTTGGGATT...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAAATCCTTTCATTCTGTaGTGTGACCCTATTCAAGTG +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRENPFIL*CDPIQV
Trigger: CACTTGAATAGGGTCACACCACAGAATGAAAGGATT...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGGACATTATGAACATTTaGTGTACTGAGGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQDIMNI*CTEAPP
Trigger: CGGAGGAGCCTCAGTACACCAAATGTTCATAATGTC...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCACTTGAAAAACTTTGGTaGCTGAGGAGAGAATGCTTT +
Preference number: 4 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSLEKLW*LRRECF
Trigger: AAAGCATTCTCTCCTCAGCCACCAAAGTTTTTCAAG...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGCATCCTTCGTCTGAATaGCCAGCTGGTCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLHPSSE*PAGLSC
Trigger: ACAGCTCAGACCAGCTGGCCATTCAGACGAAGGATG...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGATCATGCACAAGCGATaGTGTGGAGTGCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: RSPVPYDFLQITFICILVIMHKR*CGVLGG
Trigger: TCCACCGAGCACTCCACACCATCGCTTGTGCATGAT...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGAATGATGGGCTCCCTTTaGCTAAGGCACTGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRMMGSL*LRHCFP
Trigger: AGGAAAACAGTGCCTTAGCCAAAGGGAGCCCATCAT...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGGTCTTCAAGGATGTTaGTGGTGTGTTCTACCGTCA +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPGLQGC*WCVLPS
Trigger: TGACGGTAGAACACACCACCAACATCCTTGAAGACC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCACTGGCACCAAGGTATTaGAATATATTTTGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSLAPRY*NIFCQL
Trigger: TAGCTGGCAAAATATATTCCAATACCTTGGTGCCAG...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGGAGAATGGCAGCACGTaGCTTGGTAGCCAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: RSPVPYDFLQITFICILVENGST*LGSQGN
Trigger: ATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCTC...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAACTAGTGACAGCTAGTTaGGATAAACCATCTACATAT +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRELVTAS*DKPSTY
Trigger: ATATGTAGATGGTTTATCTCAACTAGCTGTCACTAG...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGTCTTCCTATTGGCACTaGGGTTTGCAGCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLSSYWH*GLQQGS
Trigger: AGATCCCTGCTGCAAACCTCAGTGCCAATAGGAAGA...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGAGATGCCTCCTGTGTTaGCATCTTTTGCCTGATGAA +
Preference number: 4 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLRCLLC*HLLPDE
Trigger: TTCATCAGGCAAAAGATGTCAACACAGGAGGCATCT...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGCTGCTCATTGGCACTaGGGTCATCCGCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLAAHWH*GHPHSN
Trigger: ATTTGAATGCGGATGACCTCAGTGCCAATGAGCAGC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp GCAACAACAAACAAGAGATTCTACCATGACTCTGCATGCTTGAGAAAGAGGAATTTTCATTCTGTGGTGTaGCCCTATTCAAGTGAACAG +
Preference number: 4 (lower is better)
Translates to: ATTNKRFYHDSACLRKRNFHSVV*PYSSEQ
Trigger: CTGTTCACTTGAATAGGGTCACACCACAGAATGAAA...ATTCCTCTTTCTCAAGCATGCAGAGTCATGGTAGAATCTCTTGTTTGTTGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCATCTTCAAACTCTGCGTaGAACTCTGTTTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSSSNSA*NSVCCK
Trigger: TTTACAACAAACAGAGTTTCACGCAGAGTTTGAAGA...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGGTACGTCTCCCCATCTaGTGTGCCTTCGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: RSPVPYDFLQITFICILVVRLPI*CAFVFT
Trigger: AGTGAAAACGAAGGCACATCAGATGGGGAGACGTAC...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCAAAAAACTTTGGTGGCTaGGGAGAGAATGCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSKNFGG*GENALK
Trigger: TTTTAAAGCATTCTCTCCTCAGCCACCAAAGTTTTT...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCTGGCATTGTAAACACTaGAGTCAGCAAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPWHCKH*SQQTPQ
Trigger: CTGTGGAGTTTGCTGACTTCAGTGTTTACAATGCCA...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATGTTTGAGGACGGCCTaGAATCATGCACAAGCGATG +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSACLRTA*NHAQAM
Trigger: CATCGCTTGTGCATGATTTCAGGCCGTCCTCAAACA...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGCCAGTCCTGCACAGTaGTTTGGAGTTTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLASPAQ*FGVFLR
Trigger: CCTGAGAAAAACTCCAAATCACTGTGCAGGACTGGC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGACGTCTCCATCAGATaGAATGTCAATCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPDVSIR*NVNLTV
Trigger: CACTGTGAGATTGACATTGCATCTGATGGAGACGTC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCTGGTTCACTCACTATTaGACCTCTCTTCCTATTGGC +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPWFTHY*TSLPIG
Trigger: GCCAATAGGAAGAGAGGTGCAATAGTGAGTGAACCA...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCGCTGATGATAGGGACTaGATACTGAAGTTTCACATC +
Preference number: 4 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFADDRD*ILKFHI
Trigger: GATGTGAAACTTCAGTATGCAGTCCCTATCATCAGC...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGGCTGATGATAGGGACTaGATACTGAAGTTTCACATC +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQADDRD*ILKFHI
Trigger: GATGTGAAACTTCAGTATGCAGTCCCTATCATCAGC...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAGGCTTTGGTGGAAAGTaGTTCTTTGACTGTGACGGC +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAGFGGK*FFDCDG
Trigger: GCCGTCACAGTCAAAGAAGCACTTTCCACCAAAGCC...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTCCTGAGGGTACAATaGAGCCAGGGTTATGTGCCT +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAFLRVQ*SQGYVP
Trigger: AGGCACATAACCCTGGCTGCATTGTACCCTCAGGAA...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502297.5
CDS-3UTR GCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAAGTTTTTCTCAGGGATaGTCTGGGATGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSASFSQG*SGMMGS
Trigger: GGAGCCCATCATCCCAGAGCATCCCTGAGAAAAACT...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGTTATGGCACCAAACTTaGAGTCAAACATACATGTTC +
Preference number: 4 (lower is better)
Translates to: RVICIRSSPANMVKGEPLLWHQT*SQTYMF
Trigger: GAACATGTATGTTTGACTGCAAGTTTGGTGCCATAA...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGATGTTGAACACAGCATaGGAGCGGCTGCTTTCTTCG +
Preference number: 4 (lower is better)
Translates to: RSPVPYDFLQITFICILVMLNTA*ERLLSS
Trigger: CGAAGAAAGCAGCCGCTCCCATGCTGTGTTCAACAT...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGTCATTCACAACAGCATaGTTCACAATCCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQSFTTA*FTILLA
Trigger: AGCCAAAAGGATTGTGAACCATGCTGTTGTGAATGA...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAAACCACATTTTGAACTaGGTCATTACTATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRENHILN*VITIQG
Trigger: ACCCTGAATAGTAATGACCCAGTTCAAAATGTGGTT...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGAAGGTCACTGTGTACTaGGCATCCTTGGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLKVTVY*ASLDCG
Trigger: ACCACAGTCCAAGGATGCCCAGTACACAGTGACCTT...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGAATCCTTTCATTCTGTaGTGTGACCCTATTCAAGTG +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQNPFIL*CDPIQV
Trigger: CACTTGAATAGGGTCACACCACAGAATGAAAGGATT...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGAGACATTATGAACATTTaGTGTACTGAGGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRDIMNI*CTEAPP
Trigger: CGGAGGAGCCTCAGTACACCAAATGTTCATAATGTC...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAAAGGTCCGGTCGGCTaGAAGAGACATTATGAACAT +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPKGPVG*KRHYEH
Trigger: ATGTTCATAATGTCTCTTCCAGCCGACCGGACCTTT...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGTCCAACTGGTTCTCTaGCCAACCCTTGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLVQLVL*PTLVIF
Trigger: GAAGATGACAAGGGTTGGCCAGAGAACCAGTTGGAC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp GCAACAACAAACAAGAGATTCTACCATGACTCTGCATGCTTGAGAAAGAGGAATTTCGAGGAGAATCCCTaGGTAAAGTTCCATAACATG +
Preference number: 4 (lower is better)
Translates to: ATTNKRFYHDSACLRKRNFEENP*VKFHNM
Trigger: CATGTTATGGAACTTTACCCAGGGATTCTCCTCGAA...ATTCCTCTTTCTCAAGCATGCAGAGTCATGGTAGAATCTCTTGTTTGTTGTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCCTTGAAAAACTTTGGTaGCTGAGGAGAGAATGCTTT +
Preference number: 4 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCLEKLW*LRRECF
Trigger: AAAGCATTCTCTCCTCAGCCACCAAAGTTTTTCAAG...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAAATTCTGTGAAAGAATaGTCTTCAAGGATGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRENSVKE*SSRMLV
Trigger: CACCAACATCCTTGAAGACCATTCTTTCACAGAATT...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGCTAGTGACAGCTAGTTaGGATAAACCATCTACATAT +
Preference number: 4 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQLVTAS*DKPSTY
Trigger: ATATGTAGATGGTTTATCTCAACTAGCTGTCACTAG...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGCAGCCAAGTGAGGACTaGATCTCGATAAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLQPSED*ISIRHK
Trigger: TTTGTGCCTTATCGAGATTCAGTCCTCACTTGGCTG...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGATAGGGACTGCATACTaGAGTTTCACATCACAGAAG +
Preference number: 4 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLIGTAY*SFTSQK
Trigger: CTTCTGTGATGTGAAACTTCAGTATGCAGTCCCTAT...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR TCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGTGCTCCATCTGAAATaGACTCCAGAAATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPVLHLK*TPEILL
Trigger: CAGAAGAATTTCTGGAGTTCATTTCAGATGGAGCAC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGTTTAATGAGTGCATCTaGCCACCTCTCCCTTACGCA +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLFNECI*PPLPYA
Trigger: TGCGTAAGGGAGAGGTGGTCAGATGCACTCATTAAA...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAGTGACCCTATTCAAGTaGACAGAATCATGCACCGAG +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAVTLFK*TESCTE
Trigger: CTCGGTGCATGATTCTGTTCACTTGAATAGGGTCAC...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCCTGGAAGAGACATTATaGACATTTGGTGTACTGAGG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPLEETL*TFGVLR
Trigger: CCTCAGTACACCAAATGTTCATAATGTCTCTTCCAG...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGCTGACGGTTAAGGCATaGGGAGTCTCTGATGTACAA +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLLTVKA*GVSDVQ
Trigger: TTGTACATCAGAGACTCCTCATGCCTTAACCGTCAG...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGTTAGACATACTCATTaGCAGCACAGAACCCAAAAG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPVRHTH*QHRTQK
Trigger: CTTTTGGGTTCTGTGCTGTCAATGAGTATGTCTAAC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGAGATAAGGCACAAATTTaGTTTTACCCTTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRDKAQI*FYPCQL
Trigger: CAGCTGGCAAGGGTAAAAGCAAATTTGTGCCTTATC...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGATAAGGCACAAATTTaGTTTTACCCTTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPDKAQI*FYPCQL
Trigger: CAGCTGGCAAGGGTAAAAGCAAATTTGTGCCTTATC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGGAGGCTGAATTCCTATaGCAAAAAGCTGGATATCTT +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQEAEFL*QKAGYL
Trigger: AAGATATCCAGCTTTTTGGCATAGGAATTCAGCCTC...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCACAGCATGGCCCATCATaGAAAAGGATTTTCCCGAAC +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAQHGPS*KRIFPN
Trigger: GTTCGGGAAAATCCTTTTCCATGATGGGCCATGCTG...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGTATCTGCACCCACCCTaGTGTGATCCTTTAAATAAT +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQYLHPP*CDPLNN
Trigger: ATTATTTAAAGGATCACACCAGGGTGGGTGCAGATA...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAGGCTCCCACTTTCACTaGAATTCTCCGAAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAGSHFH*NSPKSH
Trigger: ATGACTCTTCGGAGAATTCCAGTGAAAGTGGGAGCC...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCTTCGAGGAGAATCCCTaGGTAAAGTTCCATAACATG +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPFEENP*VKFHNM
Trigger: CATGTTATGGAACTTTACCCAGGGATTCTCCTCGAA...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAGGGCTTGAAAAACTTTaGTGGCTGAGGAGAGAATGC +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAGLEKL*WLRREC
Trigger: GCATTCTCTCCTCAGCCACCAAAGTTTTTCAAGCCC...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGGGCTTGAAAAACTTTaGTGGCTGAGGAGAGAATGC +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLGLEKL*WLRREC
Trigger: GCATTCTCTCCTCAGCCACCAAAGTTTTTCAAGCCC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGCCACTTTAATTTTTTATACCCCATTTGTTaGATGAATGCCCCACAGGAT +
Preference number: 4 (lower is better)
Translates to: PFIHMWGLMQFTSRHFNFLYPIC*MNAPQD
Trigger: ATCCTGTGGGGCATTCATCCAACAAATGGGGTATAA...AAAATTAAAGTGGCGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGAGATGCCTCCTGTGTTaGCATCTTTTGCCTGATGAA +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLRCLLC*HLLPDE
Trigger: TTCATCAGGCAAAAGATGTCAACACAGGAGGCATCT...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGTGTCAACTCTTTGTTTaGGGACGGCCTGAAATCATG +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLCQLFV*GRPEIM
Trigger: CATGATTTCAGGCCGTCCTCAAACAAAGAGTTGACA...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGACGTCTCCATCAGATaGAATGTCAATCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLDVSIR*NVNLTV
Trigger: CACTGTGAGATTGACATTGCATCTGATGGAGACGTC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGCAAAGGCAAATACCTTaGGAGGTTTCCTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLQRQIP*EVSFLP
Trigger: AGGGAGAAAGGAAACCTCCCAAGGTATTTGCCTTTG...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGACTGTCTACTCCCTTTaGGGTCTAAAAGATCCCGAA +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLTVYSL*GLKDPE
Trigger: TTCGGGATCTTTTAGACCCCAAAGGGAGTAGACAGT...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGCCTTGCATTTTCTTTTaGAGTGAGAGTGACGTCTCC +
Preference number: 4 (lower is better)
Translates to: RSPVPYDFLQITFICILVPCIFF*SESDVS
Trigger: GGAGACGTCACTCTCACTCCAAAAGAAAATGCAAGG...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAACCACATTTTGAACTaGGTCATTACTATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQNHILN*VITIQG
Trigger: ACCCTGAATAGTAATGACCCAGTTCAAAATGTGGTT...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAATCGAGGAAGAGAACTaGTATGTGGGTTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAIEEEN*YVGFHS
Trigger: GGAATGGAAACCCACATACCAGTTCTCTTCCTCGAT...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAAAAGGTCCGGTCGGCTaGAAGAGACATTATGAACAT +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAKGPVG*KRHYEH
Trigger: ATGTTCATAATGTCTCTTCCAGCCGACCGGACCTTT...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGCTGTCACAAACAACTaGATGAATCTTTCCTACCAA +
Preference number: 4 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPAVTNN*MNLSYQ
Trigger: TTGGTAGGAAAGATTCATCCAGTTGTTTGTGACAGC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCGTTCACACAAAAGAGTaGACAGCAAAAATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFVHTKE*TAKMLS
Trigger: AGACAACATTTTTGCTGTCCACTCTTTTGTGTGAAC...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGATAGGGACTGCATACTaGAGTTTCACATCACAGAAG +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLIGTAY*SFTSQK
Trigger: CTTCTGTGATGTGAAACTTCAGTATGCAGTCCCTAT...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCACATCACTGTGCTTTATaGTGGGCAGGTAGAAAAACT +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAHHCAL*WAGRKT
Trigger: AGTTTTTCTACCTGCCCATCATAAAGCACAGTGATG...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGTTTCATTCTGTGGTGTaGCCCTATTCAAGTGAACAG +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLFHSVV*PYSSEQ
Trigger: CTGTTCACTTGAATAGGGTCACACCACAGAATGAAA...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTCATTCTGTGGTGTaGCCCTATTCAAGTGAACAG +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAFHSVV*PYSSEQ
Trigger: CTGTTCACTTGAATAGGGTCACACCACAGAATGAAA...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGTCCGTAGAGTCTCTTTaGCTCAGGAACTTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RSPVPYDFLQITFICILVSVESL*LRNFFL
Trigger: AAGGAAAAAGTTCCTGAGGCAAAGAGACTCTACGGA...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR GCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGCTGATGATAGGGACTaGATACTGAAGTTTCACATC +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLADDRD*ILKFHI
Trigger: GATGTGAAACTTCAGTATGCAGTCCCTATCATCAGC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGTCTGGAATTATTACCTaGTCATTCTCTAACTTGGAA +
Preference number: 4 (lower is better)
Translates to: LIISQLRSSSQNRLALRQSGIIT*SFSNLE
Trigger: TTCCAAGTTAGAGAATGACCAGGTAATAATTCCAGA...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGCCAGAGTTAAACTACTaGAGAGATATGACAGGAATA +
Preference number: 4 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLPELNY*RDMTGI
Trigger: TATTCCTGTCATATCTCTCCAGTAGTTTAACTCTGG...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAGAGGTTTCTATACAGTaGAGGTGTGTAGTAAGTGCA +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAEVSIQ*RCVVSA
Trigger: TGCACTTACTACACACCTCCACTGTATAGAAACCTC...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
3UTR CAA 72 bp ATTTTTCATCTGCTCATGTATAAGAGATCGCCCAAGTaGCTTTGTAACGAAGTCCAGTACCTTATGATTTTC +
Preference number: 4 (lower is better)
Translates to: IFHLLMYKRSPK*LCNEVQYLMIF
Trigger: GAAAATCATAAGGTACTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGGTCTGCATTCAGATTaGCTAAGTAGCATTTGTCAT +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLGLHSD*LSSICH
Trigger: ATGACAAATGCTACTTAGTCAATCTGAATGCAGACC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGAGGCTGAATTCCTATaGCAAAAAGCTGGATATCTT +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLEAEFL*QKAGYL
Trigger: AAGATATCCAGCTTTTTGGCATAGGAATTCAGCCTC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR GCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATCTTCTTCTCACGTTTaGTATTGTGTTCTACTGGCA +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSASSSHV*YCVLLA
Trigger: TGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGA...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502297.5
CDS-3UTR GCA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGATTTATAACCTAAGGTaGCTGGTATGCAGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLIYNLR*LVCSVF
Trigger: AAAAACACTGCATACCAGGCACCTTAGGTTATAAAT...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGCTGCATATCTTAATGTaGAGAGGGTCTCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLLHILM*RGSLHS
Trigger: ACTATGAAGAGACCCTCTCCACATTAAGATATGCAG...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGTCATTCACAACAGCATaGTTCACAATCCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLSFTTA*FTILLA
Trigger: AGCCAAAAGGATTGTGAACCATGCTGTTGTGAATGA...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGAATCCTTTCATTCTGTaGTGTGACCCTATTCAAGTG +
Preference number: 4 (lower is better)
Translates to: RSPVPYDFLQITFICILVNPFIL*CDPIQV
Trigger: CACTTGAATAGGGTCACACCACAGAATGAAAGGATT...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGCTTGAAAAACTTTGGTaGCTGAGGAGAGAATGCTTT +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLLEKLW*LRRECF
Trigger: AAAGCATTCTCTCCTCAGCCACCAAAGTTTTTCAAG...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGTCTTCAAACTCTGCGTaGAACTCTGTTTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLSSNSA*NSVCCK
Trigger: TTTACAACAAACAGAGTTTCACGCAGAGTTTGAAGA...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR TCA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGTCTTCAAACTCTGCGTaGAACTCTGTTTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: RSPVPYDFLQITFICILVSSNSA*NSVCCK
Trigger: TTTACAACAAACAGAGTTTCACGCAGAGTTTGAAGA...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAGCTATCCTTTTCTTATaGTCCTCTTTTACAGGCATT +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAAILFL*SSFTGI
Trigger: AATGCCTGTAAAAGAGGAGCATAAGAAAAGGATAGC...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR GCA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGCTATCCTTTTCTTATaGTCCTCTTTTACAGGCATT +
Preference number: 4 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLAILFL*SSFTGI
Trigger: AATGCCTGTAAAAGAGGAGCATAAGAAAAGGATAGC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CCA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAGTTCACACAAAAGAGTaGACAGCAAAAATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAVHTKE*TAKMLS
Trigger: AGACAACATTTTTGCTGTCCACTCTTTTGTGTGAAC...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS GCA 90 bp AGGCGGTCAGGGCCGCTACTCTGTGGCTGCCTGTCGGGGGAGAGCTaGTGGCGGAGTTGCTCCAGTTCCCGCTCATACATGAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: RRSGPLLCGCLSGES*WRSCSSSRSYMSRC
Trigger: GCAGCGGCTCATGTATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCTCTCCCCCGACAGGCAGCCACAGAGTAGCGGCCCTGACCGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000503342.1
ENST00000636847.1
CDS CCA 90 bp CGGTCAGGGCCGCTACTCTGTGGCTGCCTGTCGGGGGAGAGCTGCTaGCGGAGTTGCTCCAGTTCCCGCTCATACATGAGCCGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RSGPLLCGCLSGESC*RSCSSSRSYMSRCS
Trigger: GGAGCAGCGGCTCATGTATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCTCTCCCCCGACAGGCAGCCACAGAGTAGCGGCCCTGACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000503342.1
ENST00000636847.1
CDS GCA 90 bp CCCTCTCTTCTGCCCACTGGGTCACCTTCTGCTGCGCTGTCTGGCTaGTGTAGGCCAGGCGGTCAGGGCCGCTACTCTGTGGCTGCCTGT +
Preference number: 5 (lower is better)
Translates to: PSLLPTGSPSAALSG*CRPGGQGRYSVAAC
Trigger: ACAGGCAGCCACAGAGTAGCGGCCCTGACCGCCTGGCCTACAGCAGCCAGACAGCGCAGCAGAAGGTGACCCAGTGGGCAGAAGAGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS GCA 90 bp CCGCTACTCTGTGGCTGCCTGTCGGGGGAGAGCTGCTGGCGGAGTTaGTCCAGTTCCCGCTCATACATGAGCCGCTGCTCCTCTAGGGCA +
Preference number: 5 (lower is better)
Translates to: PLLCGCLSGESCWRS*SSSRSYMSRCSSRA
Trigger: TGCCCTAGAGGAGCAGCGGCTCATGTATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCTCTCCCCCGACAGGCAGCCACAGAGTAGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000503342.1
ENST00000636847.1
CDS GCA 90 bp TCCTCTCTTCTGCCCACTGGGTCACCTTCTGCTGCGCTGTCTGGCTaGTGTAGGCCAGGCGGTCAGGGCCGCTACTCTGTGGCTGCCTGT +
Preference number: 5 (lower is better)
Translates to: SSLLPTGSPSAALSG*CRPGGQGRYSVAAC
Trigger: ACAGGCAGCCACAGAGTAGCGGCCCTGACCGCCTGGCCTACAGCAGCCAGACAGCGCAGCAGAAGGTGACCCAGTGGGCAGAAGAGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503342.1
CDS GCA 90 bp TTCCAGGAGGTGGGATCCAGTCGGCAGGTGCCCCAGGAATCCCACTaGCTGGGGCTGGCACCAGCACAGCATTCCTTTCCTCAGTCAGCC +
Preference number: 5 (lower is better)
Translates to: FQEVGSSRQVPQESH*LGLAPAQHSFPQSA
Trigger: GGCTGACTGAGGAAAGGAATGCTGTGCTGGTGCCAGCCCCAGGCAGTGGGATTCCTGGGGCACCTGCCGACTGGATCCCACCTCCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000506044.1
ENST00000636847.1
CDS TCA 90 bp ACAGTGGGAGAAGGTCACTGTGTACTGGGCATCCTTGGACTGTGGTaGAGGCACCTCGGGGTCCACCACCGGGGCAGCCACCGTAGACTC +
Preference number: 5 (lower is better)
Translates to: TVGEGHCVLGILGLW*RHLGVHHRGSHRRL
Trigger: GAGTCTACGGTGGCTGCCCCGGTGGTGGACCCCGAGGTGCCTTCACCACAGTCCAAGGATGCCCAGTACACAGTGACCTTCTCCCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS-3UTR CAA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACAGGGTGCAGGACCGTTaGATTCCCTTCCATCTCCAC +
Preference number: 5 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDRVQDR*IPFHLH
Trigger: GTGGAGATGGAAGGGAATCAAACGGTCCTGCACCCT...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGCTCTCACCGTGAGGTaGTGCCTCCCTGGTCATTCT +
Preference number: 5 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPALTVR*CLPGHS
Trigger: AGAATGACCAGGGAGGCACAACCTCACGGTGAGAGC...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS GCA 90 bp AAACTGGCTGCCATGCTCCTTGGGCAGGATGGAGTTCACGCCGGATaGATGGGGGCCAACAAGCTGCTCATTGGCACTGAGGTCATCCGC +
Preference number: 5 (lower is better)
Translates to: KLAAMLLGQDGVHAG*MGANKLLIGTEVIR
Trigger: GCGGATGACCTCAGTGCCAATGAGCAGCTTGTTGGCCCCCATGCATCCGGCGTGAACTCCATCCTGCCCAAGGAGCATGGCAGCCAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000506044.1
ENST00000636847.1
CDS CCA 90 bp CATAGTCCTTACAGTGGGAGAAGGTCACTGTGTACTGGGCATCCTTaGACTGTGGTGAAGGCACCTCGGGGTCCACCACCGGGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: HSPYSGRRSLCTGHP*TVVKAPRGPPPGQP
Trigger: TGGCTGCCCCGGTGGTGGACCCCGAGGTGCCTTCACCACAGTCCAAGGATGCCCAGTACACAGTGACCTTCTCCCACTGTAAGGACTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 90 bp TGGCTGCCATGCTCCTTGGGCAGGATGGAGTTCACGCCGGATGCATaGGGGCCAACAAGCTGCTCATTGGCACTGAGGTCATCCGCATTC +
Preference number: 5 (lower is better)
Translates to: WLPCSLGRMEFTPDA*GPTSCSLALRSSAF
Trigger: GAATGCGGATGACCTCAGTGCCAATGAGCAGCTTGTTGGCCCCCATGCATCCGGCGTGAACTCCATCCTGCCCAAGGAGCATGGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000506044.1
ENST00000636847.1
CDS CCA 90 bp CGTGAGGTTGTGCCTCCCTGGTCATTCTCTAACTTGGAATGCAGCTaGCTGGGGTGGTGGAGCCCATCGGAGACAGTCTTGCCGCCTGTT +
Preference number: 5 (lower is better)
Translates to: REVVPPWSFSNLECS*LGWWSPSETVLPPV
Trigger: AACAGGCGGCAAGACTGTCTCCGATGGGCTCCACCACCCCAGCCAGCTGCATTCCAAGTTAGAGAATGACCAGGGAGGCACAACCTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTTTGGTATCCGACATGTaGGCTGCGCTCGCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: TETAVQEVSLLLCGLIFALVSDM*AALARP
Trigger: CGGCCGGGCGAGCGCAGCCAACATGTCGGATACCAA...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259711.11
CDS-3UTR CAA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTCGAATGTGCCGGGCTTaGGTGGAAAGTGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPRMCRA*VESASL
Trigger: CAAAGAAGCACTTTCCACCAAAGCCCGGCACATTCG...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS GCA 90 bp AGGCGAACAAAGACGCCAAGCTGTGGCCTGAGGAGGGGTGCTTGCTaGTCTCACCGTGAGGTTGTGCCTCCCTGGTCATTCTCTAACTTG +
Preference number: 5 (lower is better)
Translates to: RRTKTPSCGLRRGAC*SHREVVPPWSFSNL
Trigger: CAAGTTAGAGAATGACCAGGGAGGCACAACCTCACGGTGAGAGCAGCAAGCACCCCTCCTCAGGCCACAGCTTGGCGTCTTTGTTCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTGAGCTGCTGGCGGAGTaGCTCCAGTTCCCGCTCATA +
Preference number: 5 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGELLAE*LQFPLI
Trigger: TATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCTC...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGTGGCTGCCATGCTCCTaGGGCAGGATGGAGTTCACG +
Preference number: 5 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGWLPCS*GRMEFT
Trigger: CGTGAACTCCATCCTGCCCAAGGAGCATGGCAGCCA...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTGGCTGCCATGCTCCTaGGGCAGGATGGAGTTCACG +
Preference number: 5 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAWLPCS*GRMEFT
Trigger: CGTGAACTCCATCCTGCCCAAGGAGCATGGCAGCCA...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTCCATCGGAGACAGTCTaGCCGCCTGTTTTATTTGGT +
Preference number: 5 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPPSETV*PPVLFG
Trigger: ACCAAATAAAACAGGCGGCAAGACTGTCTCCGATGG...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS TCA 90 bp GTGCTCGGTGGAGTCTGCATCCTTCGTCTGAATGGCCAGCTGGTCTaGGCTGTCACTAGAAGGGACCACCATGTCAGACAGGGTGGCATT +
Preference number: 5 (lower is better)
Translates to: VLGGVCILRLNGQLV*AVTRRDHHVRQGGI
Trigger: AATGCCACCCTGTCTGACATGGTGGTCCCTTCTAGTGACAGCTCAGACCAGCTGGCCATTCAGACGAAGGATGCAGACTCCACCGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS TCA 90 bp ACAAGCGATGGTGTGGAGTGCTCGGTGGAGTCTGCATCCTTCGTCTaGATGGCCAGCTGGTCTGAGCTGTCACTAGAAGGGACCACCATG +
Preference number: 5 (lower is better)
Translates to: TSDGVECSVESASFV*MASWSELSLEGTTM
Trigger: CATGGTGGTCCCTTCTAGTGACAGCTCAGACCAGCTGGCCATTCAGACGAAGGATGCAGACTCCACCGAGCACTCCACACCATCGCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS GCA 90 bp TGTGTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATaGAGCCAGGGTTATGTGCCTGAGGTGGAGGCATGCTCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: CVLLACCCHCFLRVQ*SQGYVPEVEACSPG
Trigger: GCCAGGAGAGCATGCCTCCACCTCAGGCACATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000502297.5
ENST00000636847.1
CDS-3UTR CAA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCATTCCTTTCTCCCTGTTaGGTGTTAGAAGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: EVHGVDSPASGLRSSQAAFLSPC*VLEGGG
Trigger: CCCTCCTCCTTCTAACACCAAACAGGGAGAAAGGAA...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp GGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGCTGGTTCACTCACTATaGCACCTCTCTTCCTATTGG +
Preference number: 5 (lower is better)
Translates to: GWCLPKVTRRTKTPSCGLLVHSL*HLSSYW
Trigger: CCAATAGGAAGAGAGGTGCAATAGTGAGTGAACCAG...CAGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTACTGTCCAGCCCTCTTaGGAGTTTGGTGGACCTGGC +
Preference number: 5 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPATVQPS*EFGGPG
Trigger: GCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGT...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGGTGGAAAGTGCTTCTTaGACTGTGACGGCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGVESAS*TVTACR
Trigger: CCGGCAGGCCGTCACAGTCAAAGAAGCACTTTCCAC...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACACTTCTGTCAACTCTTaGTTTGAGGACGGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDTSVNS*FEDGLK
Trigger: TTTCAGGCCGTCCTCAAACAAAGAGTTGACAGAAGT...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS TCA 90 bp CTGCAGCACGCCTCGAGTGTACTTCTCAATGTACGTCTCCCCATCTaGTGTGCCTTCGTTTTCACTCCTTGCTGCCAGGAGAGCCAGCGT +
Preference number: 5 (lower is better)
Translates to: LQHASSVLLNVRLPI*CAFVFTPCCQESQR
Trigger: ACGCTGGCTCTCCTGGCAGCAAGGAGTGAAAACGAAGGCACATCAGATGGGGAGACGTACATTGAGAAGTACACTCGAGGCGTGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS GCA 90 bp TTGGGCAGGATGGAGTTCACGCCGGATGCATGGGGGCCAACAAGCTaGTCATTGGCACTGAGGTCATCCGCATTCAAATCGAGGAAGAGA +
Preference number: 5 (lower is better)
Translates to: LGRMEFTPDAWGPTS*SLALRSSAFKSRKR
Trigger: TCTCTTCCTCGATTTGAATGCGGATGACCTCAGTGCCAATGAGCAGCTTGTTGGCCCCCATGCATCCGGCGTGAACTCCATCCTGCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000506044.1
ENST00000636847.1
CDS GCA 90 bp GCACGCCTCGAGTGTACTTCTCAATGTACGTCTCCCCATCTGATGTaGCTTCGTTTTCACTCCTTGCTGCCAGGAGAGCCAGCGTTTCCC +
Preference number: 5 (lower is better)
Translates to: ARLECTSQCTSPHLM*LRFHSLLPGEPAFP
Trigger: GGGAAACGCTGGCTCTCCTGGCAGCAAGGAGTGAAAACGAAGGCACATCAGATGGGGAGACGTACATTGAGAAGTACACTCGAGGCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS GCA 90 bp GTGACGGCCTGCCGGAGCCGTTCAAGACTCAGAATGTTTTCCACCTaGAGCACGCCTCGAGTGTACTTCTCAATGTACGTCTCCCCATCT +
Preference number: 5 (lower is better)
Translates to: VTACRSRSRLRMFST*STPRVYFSMYVSPS
Trigger: AGATGGGGAGACGTACATTGAGAAGTACACTCGAGGCGTGCTGCAGGTGGAAAACATTCTGAGTCTTGAACGGCTCCGGCAGGCCGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS CCA 90 bp GCACTGAGGTCATCCGCATTCAAATCGAGGAAGAGAACTGGTATGTaGGTTTCCATTCCAGGAGGTGGGATCCAGTCGGCAGGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: ALRSSAFKSRKRTGM*VSIPGGGIQSAGAP
Trigger: TGGGGCACCTGCCGACTGGATCCCACCTCCTGGAATGGAAACCCACATACCAGTTCTCTTCCTCGATTTGAATGCGGATGACCTCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000506044.1
ENST00000636847.1
CDS CCA 90 bp GTGCCTCCCTGGTCATTCTCTAACTTGGAATGCAGCTGGCTGGGGTaGTGGAGCCCATCGGAGACAGTCTTGCCGCCTGTTTTATTTGGT +
Preference number: 5 (lower is better)
Translates to: VPPWSFSNLECSWLG*WSPSETVLPPVLFG
Trigger: ACCAAATAAAACAGGCGGCAAGACTGTCTCCGATGGGCTCCACCACCCCAGCCAGCTGCATTCCAAGTTAGAGAATGACCAGGGAGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTAGGGTGCAGGACCGTTaGATTCCCTTCCATCTCCAC +
Preference number: 5 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPARVQDR*IPFHLH
Trigger: GTGGAGATGGAAGGGAATCAAACGGTCCTGCACCCT...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCACTTTCTTCGTTCATGTaGGTAGCAGCTACCGTTCGA +
Preference number: 5 (lower is better)
Translates to: EVHGVDSPASGLRSSQAALSSFM*VAATVR
Trigger: TCGAACGGTAGCTGCTACCAACATGAACGAAGAAAG...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp TGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACCCCATGCTTTCAAGTaGTCGTTGTCTTTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: WAEPRSRQLWSQDPSHCQPHAFK*SLSFLC
Trigger: GCACAGGAAAGACAACGACAACTTGAAAGCATGGGG...TTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGAGCTGCTGGCGGAGTaGCTCCAGTTCCCGCTCATA +
Preference number: 5 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASELLAE*LQFPLI
Trigger: TATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCTC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATGCACCTCTCTTCCTATaGGCACTGAGGTTTGCAGCA +
Preference number: 5 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHAPLFL*ALRFAA
Trigger: TGCTGCAAACCTCAGTGCCAATAGGAAGAGAGGTGC...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATAGCCCTCTTTGGAGTTaGGTGGACCTGGCAGTTACA +
Preference number: 5 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHSPLWS*VDLAVT
Trigger: TGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATGGCTTAGAAGAGGCCTaGCTTCCAGGGCTATCCTTT +
Preference number: 5 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHGLEEA*LPGLSF
Trigger: AAAGGATAGCCCTGGAAGCAAGGCCTCTTCTAAGCC...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGGCTGGCTGGCTAATTTaGCTGGGGCAGGCATCTAGT +
Preference number: 5 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGAGWLI*LGQASS
Trigger: ACTAGATGCCTGCCCCAGCAAAATTAGCCAGCCAGC...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGAGATGGGGCTGGTGCTaGCCCAAGGTGACCAGGCGA +
Preference number: 5 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVRWGWC*PKVTRR
Trigger: TCGCCTGGTCACCTTGGGCAAGCACCAGCCCCATCT...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCAAAGAGATCGCCCAAGTaGCTTTGTAACGAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: EVHGVDSPASGLRSSQAAKRSPK*LCNEVQ
Trigger: CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTT...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS GCA 90 bp AAGGCTGCCTCTGGAATTATTACCTGGTCATTCTCTAACTTGGAATaGAGCTGGCTGGGGTGGTGGAGCCCATCGGAGACAGTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: KAASGIITWSFSNLE*SWLGWWSPSETVLP
Trigger: CGGCAAGACTGTCTCCGATGGGCTCCACCACCCCAGCCAGCTGCATTCCAAGTTAGAGAATGACCAGGTAATAATTCCAGAGGCAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 90 bp ACTTTCACTGGAATTCTCCGAAGAGTCATCCTCCACCACACGCTCTaGAACAGCTCCTGTAACACGCATCACTTCCACGTGGAGACGCCC +
Preference number: 5 (lower is better)
Translates to: TFTGILRRVILHHTL*NSSCNTHHFHVETP
Trigger: GGGCGTCTCCACGTGGAAGTGATGCGTGTTACAGGAGCTGTTCCAGAGCGTGTGGTGGAGGATGACTCTTCGGAGAATTCCAGTGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 90 bp AGAGAATCGACCTCCCAGATGGAGCTGCCATTTCCAGCACACCGGTaGCCCCATACTTCAATGGCCAGTGCTCCATCTGAAATGAACTCC +
Preference number: 5 (lower is better)
Translates to: RESTSQMELPFPAHR*PHTSMASAPSEMNS
Trigger: GGAGTTCATTTCAGATGGAGCACTGGCCATTGAAGTATGGGGCCACCGGTGTGCTGGAAATGGCAGCTCCATCTGGGAGGTCGATTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000506044.1
ENST00000636847.1
CDS CCA 90 bp GCCTCTGGAATTATTACCTGGTCATTCTCTAACTTGGAATGCAGCTaGCTGGGGTGGTGGAGCCCATCGGAGACAGTCTTGCCGCCTGTT +
Preference number: 5 (lower is better)
Translates to: ASGIITWSFSNLECS*LGWWSPSETVLPPV
Trigger: AACAGGCGGCAAGACTGTCTCCGATGGGCTCCACCACCCCAGCCAGCTGCATTCCAAGTTAGAGAATGACCAGGTAATAATTCCAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS-3UTR CAA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCTTGAAAACCACTTCTaGACCAGCGTATTTTGTAGT +
Preference number: 5 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDLENHF*TSVFCS
Trigger: ACTACAAAATACGCTGGTCAAGAAGTGGTTTTCAAG...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCGGATCACTTTTGCGTaGGGGTCCTCATTCACAACA +
Preference number: 5 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHRITFA*GSSFTT
Trigger: TGTTGTGAATGAGGACCCCAACGCAAAAGTGATCCG...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTATGCTGCTCTCGCAGTTTaGCCAGGCTTTGTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: LLACCCHCFLRVQCSQGYAALAV*PGFVGR
Trigger: TCTTCCGACAAAGCCTGGCAAAACTGCGAGAGCAGC...ATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTGCACCTCTCTTCCTATaGGCACTGAGGTTTGCAGCA +
Preference number: 5 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGAPLFL*ALRFAA
Trigger: TGCTGCAAACCTCAGTGCCAATAGGAAGAGAGGTGC...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTCAATGGTCCACACTaGGGTGCTCTTTCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHLNGPH*GALSFP
Trigger: AGGAAAGGAAAGAGCACCCAAGTGTGGACCATTGAG...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTAGCCCTCTTTGGAGTTaGGTGGACCTGGCAGTTACA +
Preference number: 5 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGSPLWS*VDLAVT
Trigger: TGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCT...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTACTGTCCAGCCCTCTTaGGAGTTTGGTGGACCTGGC +
Preference number: 5 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASTVQPS*EFGGPG
Trigger: GCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGT...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp ATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCAACTGTCCAGCCCTCTTaGGAGTTTGGTGGACCTGGC +
Preference number: 5 (lower is better)
Translates to: MAARGLVAKGIMAPNLQSTVQPS*EFGGPG
Trigger: GCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGT...TGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTGGCTGCCATGCTCCTaGGGCAGGATGGAGTTCACG +
Preference number: 5 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGWLPCS*GRMEFT
Trigger: CGTGAACTCCATCCTGCCCAAGGAGCATGGCAGCCA...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTCCTCTATCTCCTCAGTaGCCTTTGGTATATTGGATA +
Preference number: 5 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPPLSPQ*PLVYWI
Trigger: TATCCAATATACCAAAGGCAACTGAGGAGATAGAGG...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGTGGAAAGTGCTTCTTaGACTGTGACGGCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASVESAS*TVTACR
Trigger: CCGGCAGGCCGTCACAGTCAAAGAAGCACTTTCCAC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGCGAATGTGCCGGGCTTaGGTGGAAAGTGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGRMCRA*VESASL
Trigger: CAAAGAAGCACTTTCCACCAAAGCCCGGCACATTCG...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGGGCTTAGAAGAGGCCTaGCTTCCAGGGCTATCCTTT +
Preference number: 5 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGGLEEA*LPGLSF
Trigger: AAAGGATAGCCCTGGAAGCAAGGCCTCTTCTAAGCC...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTGGTCATTCTCTAACTaGGAATGCAGCTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAWSFSN*ECSWLG
Trigger: CCCCAGCCAGCTGCATTCCAAGTTAGAGAATGACCA...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGTTCCCAAAACAGACTaGCTCTCCGACAGAGACAGC +
Preference number: 5 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAVPKTD*LSDRDS
Trigger: GCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS GCA 90 bp AGCTGCTGGCGGAGTTGCTCCAGTTCCCGCTCATACATGAGCCGCTaGTCCTCTAGGGCACTTCTCTTTTCTTCTAGGTATTGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: SCWRSCSSSRSYMSR*SSRALLFSSRYCFS
Trigger: GGAGAAACAATACCTAGAAGAAAAGAGAAGTGCCCTAGAGGAGCAGCGGCTCATGTATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 90 bp GTCTGGTTCAGAGGAAGCCTCACTGGCTGCATCCAGGTCATGCTCTaGCGGGCCCGTTTCTTTTTCAAAGTCTTTCAACCAATCTCGACG +
Preference number: 5 (lower is better)
Translates to: VWFRGSLTGCIQVML*RARFFFKVFQPIST
Trigger: CGTCGAGATTGGTTGAAAGACTTTGAAAAAGAAACGGGCCCGCCAGAGCATGACCTGGATGCAGCCAGTGAGGCTTCCTCTGAACCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 90 bp CTCATTGGCACTGAGGTCATCCGCATTCAAATCGAGGAAGAGAACTaGTATGTGGGTTTCCATTCCAGGAGGTGGGATCCAGTCGGCAGG +
Preference number: 5 (lower is better)
Translates to: LIGTEVIRIQIEEEN*YVGFHSRRWDPVGR
Trigger: CCTGCCGACTGGATCCCACCTCCTGGAATGGAAACCCACATACCAGTTCTCTTCCTCGATTTGAATGCGGATGACCTCAGTGCCAATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000506044.1
ENST00000636847.1
CDS-3UTR CAA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTGACTGTCTACTCCCTTaGGGGTCTAAAAGATCCCGA +
Preference number: 5 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPADCLLP*GSKRSR
Trigger: TCGGGATCTTTTAGACCCCAAAGGGAGTAGACAGTC...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCCCCATGCTTTCAAGTaGTCGTTGTCTTTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAPHAFK*SLSFLC
Trigger: GCACAGGAAAGACAACGACAACTTGAAAGCATGGGG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AGGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGAGCTGCTGGCGGAGTaGCTCCAGTTCCCGCTCATA +
Preference number: 5 (lower is better)
Translates to: RWRGRWKTKEYSCEISQCELLAE*LQFPLI
Trigger: TATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCTC...ACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGGAGCTGCTGGCGGAGTaGCTCCAGTTCCCGCTCATA +
Preference number: 5 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLELLAE*LQFPLI
Trigger: TATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCTC...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTCAGTTTTGCCAGGCTTaGTCGGAAGAGTTCATCCCT +
Preference number: 5 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGQFCQA*SEEFIP
Trigger: AGGGATGAACTCTTCCGACAAAGCCTGGCAAAACTG...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGCTGCTCTCGCAGTTTaGCCAGGCTTTGTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASAALAV*PGFVGR
Trigger: TCTTCCGACAAAGCCTGGCAAAACTGCGAGAGCAGC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp TGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAAGATCTGAAGAGTCACTaGGTAATCGGTGAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: WAEPRSRQLWSQDPSHCQDLKSH*VIGEFA
Trigger: AGCAAACTCACCGATTACCAAGTGACTCTTCAGATC...TTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCACCTCTCTTCCTATaGGCACTGAGGTTTGCAGCA +
Preference number: 5 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPAPLFL*ALRFAA
Trigger: TGCTGCAAACCTCAGTGCCAATAGGAAGAGAGGTGC...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCCTTTCCTCCTCACTaGGATAGCTGGTTCACTCAC +
Preference number: 5 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPASFPPH*DSWFTH
Trigger: GTGAGTGAACCAGCTATCCAAGTGAGGAGGAAAGGA...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGACTGTCCAGCCCTCTTaGGAGTTTGGTGGACCTGGC +
Preference number: 5 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGTVQPS*EFGGPG
Trigger: GCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGCCAACAAGCTGCTCATaGGCACTGAGGTCATCCGCA +
Preference number: 5 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQPTSCS*ALRSSA
Trigger: TGCGGATGACCTCAGTGCCAATGAGCAGCTTGTTGG...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp TTCCACCTGCCCAGCTGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACTCTCCTCAGTTGCCTTaGGTATATTGGATACTATTT +
Preference number: 5 (lower is better)
Translates to: FHLPSWAEPRSRQLWSQDSPQLP*VYWILF
Trigger: AAATAGTATCCAATATACCAAAGGCAACTGAGGAGA...GTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCAGCTGGGCAGGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGGTGGAAAGTGCTTCTTaGACTGTGACGGCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGVESAS*TVTACR
Trigger: CCGGCAGGCCGTCACAGTCAAAGAAGCACTTTCCAC...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTCGAATGTGCCGGGCTTaGGTGGAAAGTGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: TETAVQEVSLLLCGLIFARMCRA*VESASL
Trigger: CAAAGAAGCACTTTCCACCAAAGCCCGGCACATTCG...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTATCGAATGTGCCGGGCTTaGGTGGAAAGTGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: LLACCCHCFLRVQCSQGYRMCRA*VESASL
Trigger: CAAAGAAGCACTTTCCACCAAAGCCCGGCACATTCG...ATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATTTCTCTGGCCAACCCTaGTCATCTTCATCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHFSGQP*SSSSKP
Trigger: TGGCTTTGATGAAGATGACAAGGGTTGGCCAGAGAA...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATGTCCTGCACAGTGATTaGGAGTTTTTCTCAGGGATG +
Preference number: 5 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHVLHSD*EFFSGM
Trigger: CATCCCTGAGAAAAACTCCAAATCACTGTGCAGGAC...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGGCTGGCTGGCTAATTTaGCTGGGGCAGGCATCTAGT +
Preference number: 5 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQAGWLI*LGQASS
Trigger: ACTAGATGCCTGCCCCAGCAAAATTAGCCAGCCAGC...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTGGTCATTCTCTAACTaGGAATGCAGCTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPWSFSN*ECSWLG
Trigger: CCCCAGCCAGCTGCATTCCAAGTTAGAGAATGACCA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTTCAGGACCCCAGTCATaGTCAACAGTTATAATACAA +
Preference number: 5 (lower is better)
Translates to: GLVLAQGDQANKDAKLWPSGPQS*STVIIQ
Trigger: TTGTATTATAACTGTTGACAATGACTGGGGTCCTGA...AGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS GCA 90 bp GTGGAGACGCCCTGCAACCTCCCCCTGCTGGCTGATGATAGGGACTaGATACTGAAGTTTCACATCACAGAAGAGGCATTCCAAGAATAC +
Preference number: 5 (lower is better)
Translates to: VETPCNLPLLADDRD*ILKFHITEEAFQEY
Trigger: GTATTCTTGGAATGCCTCTTCTGTGATGTGAAACTTCAGTATGCAGTCCCTATCATCAGCCAGCAGGGGGAGGTTGCAGGGCGTCTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 90 bp CATCTCTCTGGTAACTGTCCAGCCCTCTTTGGAGTTTGGTGGACCTaGCAGTTACACAGCCGATGGATACTGACAGGATGGCTTCAACCA +
Preference number: 5 (lower is better)
Translates to: HLSGNCPALFGVWWT*QLHSRWILTGWLQP
Trigger: TGGTTGAAGCCATCCTGTCAGTATCCATCGGCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGTTACCAGAGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378826.6
ENST00000636847.1
CDS CCA 90 bp CCTCATCATCTCTCTGGTAACTGTCCAGCCCTCTTTGGAGTTTGGTaGACCTGGCAGTTACACAGCCGATGGATACTGACAGGATGGCTT +
Preference number: 5 (lower is better)
Translates to: PHHLSGNCPALFGVW*TWQLHSRWILTGWL
Trigger: AAGCCATCCTGTCAGTATCCATCGGCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGTTACCAGAGAGATGATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378826.6
ENST00000636847.1
CDS CCA 90 bp CTTCTTCCTGGTAACTGTCCAGCCCTCTTTGGAGTTTGGTGGACCTaGCAGTTACACAGCCGATGGATACTGACAGGATGGCTTCAACCA +
Preference number: 5 (lower is better)
Translates to: LLPGNCPALFGVWWT*QLHSRWILTGWLQP
Trigger: TGGTTGAAGCCATCCTGTCAGTATCCATCGGCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGTTACCAGGAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378814.9
ENST00000378843.6
ENST00000502297.5
ENST00000514714.1
CDS-3UTR CAA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTATCTCCACCACGCACTaGGTGTTCAGTTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAISTTH*VFSSSS
Trigger: AGAACTGGAACTGAACACCAAGTGCGTGGTGGAGAT...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGAGGGTGCAGGACCGTTaGATTCCCTTCCATCTCCAC +
Preference number: 5 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGRVQDR*IPFHLH
Trigger: GTGGAGATGGAAGGGAATCAAACGGTCCTGCACCCT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTTCCTTTCTCCCTGTTaGGTGTTAGAAGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPFLSPC*VLEGGG
Trigger: CCCTCCTCCTTCTAACACCAAACAGGGAGAAAGGAA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGACTGTCTACTCCCTTaGGGGTCTAAAAGATCCCGA +
Preference number: 5 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPDCLLP*GSKRSR
Trigger: TCGGGATCTTTTAGACCCCAAAGGGAGTAGACAGTC...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTGACTGTCTACTCCCTTaGGGGTCTAAAAGATCCCGA +
Preference number: 5 (lower is better)
Translates to: TETAVQEVSLLLCGLIFADCLLP*GSKRSR
Trigger: TCGGGATCTTTTAGACCCCAAAGGGAGTAGACAGTC...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTCTTTCTTCGTTCATGTaGGTAGCAGCTACCGTTCGA +
Preference number: 5 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPALSSFM*VAATVR
Trigger: TCGAACGGTAGCTGCTACCAACATGAACGAAGAAAG...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GAAGTGCACGGTGTGGATTCTCCAGCTTCTGGTCTGAGGTCCAGCCAGGCGGCAAAGGTTGTAAGCGATTaGTTAATGTTGCTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: EVHGVDSPASGLRSSQAAKVVSD*LMLLPS
Trigger: AGAAGGCAGCAACATTAACAAATCGCTTACAACCTT...TGCCGCCTGGCTGGACCTCAGACCAGAAGCTGGAGAATCCACACCGTGCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGAATTTGCTTTTACCCTaGCCAGCTGCCTGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQNLLLP*PAAWSA
Trigger: GGCTGACCAGGCAGCTGGCAAGGGTAAAAGCAAATT...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTAATTTGCTTTTACCCTaGCCAGCTGCCTGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASNLLLP*PAAWSA
Trigger: GGCTGACCAGGCAGCTGGCAAGGGTAAAAGCAAATT...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTGTTCTCGGATCACTTTaGCGTTGGGGTCCTCATTCA +
Preference number: 5 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAVLGSL*RWGPHS
Trigger: TGAATGAGGACCCCAACGCAAAAGTGATCCGAGAAC...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTCCCCATGCTTTCAAGTaGTCGTTGTCTTTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPPHAFK*SLSFLC
Trigger: GCACAGGAAAGACAACGACAACTTGAAAGCATGGGG...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTGTCATCCCCCACCTaGATACCGGACATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGLSSPT*IPDISR
Trigger: CCTGGAGATGTCCGGTATCAAGGTGGGGGATGACAA...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GTTCTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTCTGGTTCACTCACTATaGCACCTCTCTTCCTATTGG +
Preference number: 5 (lower is better)
Translates to: VLLACCCHCFLRVQCSQGLVHSL*HLSSYW
Trigger: CCAATAGGAAGAGAGGTGCAATAGTGAGTGAACCAG...ACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTCTCAATGGTCCACACTaGGGTGCTCTTTCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPLNGPH*GALSFP
Trigger: AGGAAAGGAAAGAGCACCCAAGTGTGGACCATTGAG...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTAGGTTTCACCGTGACTaGTACTCTACGGGAATGACC +
Preference number: 5 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPRFHRD*YSTGMT
Trigger: GGTCATTCCCGTAGAGTACAAGTCACGGTGAAACCT...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTAGCCCTCTTTGGAGTTaGGTGGACCTGGCAGTTACA +
Preference number: 5 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASSPLWS*VDLAVT
Trigger: TGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCT...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGAGCCCTCTTTGGAGTTaGGTGGACCTGGCAGTTACA +
Preference number: 5 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQSPLWS*VDLAVT
Trigger: TGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCT...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp TGGGCTGAGCCACGGTCCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACCTCTATCTCCTCAGTaGCCTTTGGTATATTGGATA +
Preference number: 5 (lower is better)
Translates to: WAEPRSRQLWSQDPSHCQPLSPQ*PLVYWI
Trigger: TATCCAATATACCAAAGGCAACTGAGGAGATAGAGG...TTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGGACCGTGGCTCAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGGCTTAGAAGAGGCCTaGCTTCCAGGGCTATCCTTT +
Preference number: 5 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASGLEEA*LPGLSF
Trigger: AAAGGATAGCCCTGGAAGCAAGGCCTCTTCTAAGCC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGGATGATGGGCTCCCTTaGGCTAAGGCACTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQDDGLP*AKALFS
Trigger: GGAAAACAGTGCCTTAGCCAAAGGGAGCCCATCATC...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTGCCGCCTGTTTTATTaGGTAGACTCCTCCTACTGG +
Preference number: 5 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPCRLFY*VDSSYW
Trigger: CCAGTAGGAGGAGTCTACCAAATAAAACAGGCGGCA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTTGGTCATTCTCTAACTaGGAATGCAGCTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASWSFSN*ECSWLG
Trigger: CCCCAGCCAGCTGCATTCCAAGTTAGAGAATGACCA...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGTTCCCAAAACAGACTaGCTCTCCGACAGAGACAGC +
Preference number: 5 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASVPKTD*LSDRDS
Trigger: GCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGCTGGTGCTTGCCCAAGGTGACCAGGCGAACAAAGACGCCAAGCTGTGGCCTGATTATGGCACCAAACTaGCAGTCAAACATACATGTT +
Preference number: 5 (lower is better)
Translates to: GWCLPKVTRRTKTPSCGLIMAPN*QSNIHV
Trigger: AACATGTATGTTTGACTGCAAGTTTGGTGCCATAAT...CAGGCCACAGCTTGGCGTCTTTGTTCGCCTGGTCACCTTGGGCAAGCACCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS GCA 90 bp TTCCCTCACCAAGGTATTAGCTTTAACCAGCTGCTCTCGCAGTTTTaGCAGGCTTTGTCGGAAGAGTTCATCCCTCTCTTCTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: FPHQGISFNQLLSQF*QALSEEFIPLFCPL
Trigger: CAGTGGGCAGAAGAGAGGGATGAACTCTTCCGACAAAGCCTGGCAAAACTGCGAGAGCAGCTGGTTAAAGCTAATACCTTGGTGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS GCA 90 bp GCCAGGAAGTTTGCTTCCCTCACCAAGGTATTAGCTTTAACCAGCTaGTCTCGCAGTTTTGCCAGGCTTTGTCGGAAGAGTTCATCCCTC +
Preference number: 5 (lower is better)
Translates to: ARKFASLTKVLALTS*SRSFARLCRKSSSL
Trigger: GAGGGATGAACTCTTCCGACAAAGCCTGGCAAAACTGCGAGAGCAGCTGGTTAAAGCTAATACCTTGGTGAGGGAAGCAAACTTCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 90 bp AGTGATTATTTCCCCATAGGATTCGGTCACCATGCCACAGCTGGGTaGTACTGCACACAAGGGTGCCGTTCACACAGGACCTTGCATTTT +
Preference number: 5 (lower is better)
Translates to: SDYFPIGFGHHATAG*YCTQGCRSHRTLHF
Trigger: AAAATGCAAGGTCCTGTGTGAACGGCACCCTTGTGTGCAGTACCACCCAGCTGTGGCATGGTGACCGAATCCTATGGGGAAATAATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 90 bp GAGCCAGTCCTGCACAGTGATTTGGAGTTTTTCTCAGGGATGCTCTaGGATGATGGGCTCCCTTTGGCTAAGGCACTGTTTTCCTTGAGT +
Preference number: 5 (lower is better)
Translates to: EPVLHSDLEFFSGML*DDGLPLAKALFSLS
Trigger: ACTCAAGGAAAACAGTGCCTTAGCCAAAGGGAGCCCATCATCCCAGAGCATCCCTGAGAAAAACTCCAAATCACTGTGCAGGACTGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS-3UTR CAA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGGACTGTCTACTCCCTTaGGGGTCTAAAAGATCCCGA +
Preference number: 5 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQDCLLP*GSKRSR
Trigger: TCGGGATCTTTTAGACCCCAAAGGGAGTAGACAGTC...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTGTGTGATTATGATGTaGAACACAGCATGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPCVIMM*NTAWER
Trigger: CCGCTCCCATGCTGTGTTCAACATCATAATCACACA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTAATTTGCTTTTACCCTaGCCAGCTGCCTGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGNLLLP*PAAWSA
Trigger: GGCTGACCAGGCAGCTGGCAAGGGTAAAAGCAAATT...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCGGATCACTTTTGCGTaGGGGTCCTCATTCACAACA +
Preference number: 5 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASRITFA*GSSFTT
Trigger: TGTTGTGAATGAGGACCCCAACGCAAAAGTGATCCG...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTCTGGTTCACTCACTATaGCACCTCTCTTCCTATTGG +
Preference number: 5 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPLVHSL*HLSSYW
Trigger: CCAATAGGAAGAGAGGTGCAATAGTGAGTGAACCAG...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCCTTTCCTCCTCACTaGGATAGCTGGTTCACTCAC +
Preference number: 5 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQSFPPH*DSWFTH
Trigger: GTGAGTGAACCAGCTATCCAAGTGAGGAGGAAAGGA...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGTTCCGTAGAGTCTCTTaGCCTCAGGAACTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGFRRVS*PQELFP
Trigger: AGGAAAAAGTTCCTGAGGCAAAGAGACTCTACGGAA...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp AAGCAGAGGCTGTTGATTCACCCAAGTGACAAAGTGCCGCTTCTCCCACTGGGGGAGGTTGTGATTTTCTaGGGCTTCATAGAAAGGGTC +
Preference number: 5 (lower is better)
Translates to: KQRLLIHPSDKVPLLPLGEVVIF*GFIERV
Trigger: GACCCTTTCTATGAAGCCCAAGAAAATCACAACCTC...CCCCAGTGGGAGAAGCGGCACTTTGTCACTTGGGTGAATCAACAGCCTCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp ACCTGTGGCAAAATATATATAAGCCATCCTGAATGCAAGGCTGGCACCAAGGTATGGCTGCCATGCTCCTaGGGCAGGATGGAGTTCACG +
Preference number: 5 (lower is better)
Translates to: TCGKIYISHPECKAGTKVWLPCS*GRMEFT
Trigger: CGTGAACTCCATCCTGCCCAAGGAGCATGGCAGCCA...TACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCGAATGTGCCGGGCTTaGGTGGAAAGTGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGRMCRA*VESASL
Trigger: CAAAGAAGCACTTTCCACCAAAGCCCGGCACATTCG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTGGCTTAGAAGAGGCCTaGCTTCCAGGGCTATCCTTT +
Preference number: 5 (lower is better)
Translates to: ALSLLMHTAASQVTQLCSGLEEA*LPGLSF
Trigger: AAAGGATAGCCCTGGAAGCAAGGCCTCTTCTAAGCC...AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp CTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATATCTTCTTCTCACGTTaGCTATTGTGTTCTACTGGC +
Preference number: 5 (lower is better)
Translates to: LSDRDSCAGSEPASLWAHIFFSR*LLCSTG
Trigger: GCCAGTAGAACACAATAGCAAACGTGAGAAGAAGAT...ATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259711.11
CDS-3UTR CAA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGGCTGGCTGGCTAATTTaGCTGGGGCAGGCATCTAGT +
Preference number: 5 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLAGWLI*LGQASS
Trigger: ACTAGATGCCTGCCCCAGCAAAATTAGCCAGCCAGC...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS TCA 90 bp CGCGTTACTTCATTCCACCTGTCATGCAGTGTTCTTGTCTTAGCATaGAGAGAATCGACCTCCCAGATGGAGCTGCCATTTCCAGCACAC +
Preference number: 5 (lower is better)
Translates to: RVTSFHLSCSVLVLA*RESTSQMELPFPAH
Trigger: GTGTGCTGGAAATGGCAGCTCCATCTGGGAGGTCGATTCTCTTCATGCTAAGACAAGAACACTGCATGACAGGTGGAATGAAGTAACGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000506044.1
ENST00000636847.1
CDS TCA 90 bp CAGGCCCCAGTGTCTGTTGTTCCCCTTTCTGTCCATCGGTTCCCATaGTTTAGCTCTCACTTATTAGTGAGAACACGCGGTATCTGGTGT +
Preference number: 5 (lower is better)
Translates to: QAPVSVVPLSVHRFP*FSSHLLVRTRGIWC
Trigger: ACACCAGATACCGCGTGTTCTCACTAATAAGTGAGAGCTAAATCATGGGAACCGATGGACAGAAAGGGGAACAACAGACACTGGGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503342.1
CDS GCA 90 bp AACATGAGCCAGTCCTGCACAGTGATTTGGAGTTTTTCTCAGGGATaGTCTGGGATGATGGGCTCCCTTTGGCTAAGGCACTGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: NMSQSCTVIWSFSQG*SGMMGSLWLRHCFP
Trigger: AGGAAAACAGTGCCTTAGCCAAAGGGAGCCCATCATCCCAGAGCATCCCTGAGAAAAACTCCAAATCACTGTGCAGGACTGGCTCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS CCA 90 bp ATTATTACCTGGTCATTCTCTAACTTGGAATGCAGCTGGCTGGGGTaGTGGAGCCCATCGGAGACAGTCTTGCCGCCTGTTTTATTTGGT +
Preference number: 5 (lower is better)
Translates to: IITWSFSNLECSWLG*WSPSETVLPPVLFG
Trigger: ACCAAATAAAACAGGCGGCAAGACTGTCTCCGATGGGCTCCACCACCCCAGCCAGCTGCATTCCAAGTTAGAGAATGACCAGGTAATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 90 bp TTAAGTCTTCTTCCTGGTAACTGTCCAGCCCTCTTTGGAGTTTGGTaGACCTGGCAGTTACACAGCCGATGGATACTGACAGGATGGCTT +
Preference number: 5 (lower is better)
Translates to: LSLLPGNCPALFGVW*TWQLHSRWILTGWL
Trigger: AAGCCATCCTGTCAGTATCCATCGGCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGTTACCAGGAAGAAGACTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378814.9
ENST00000378843.6
ENST00000502297.5
ENST00000514714.1
CDS-3UTR CAA 90 bp CCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGCCACTTTAATTTTTTGGTATCCGACATGTaGGCTGCGCTCGCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: PFIHMWGLMQFTSRHFNFLVSDM*AALARP
Trigger: CGGCCGGGCGAGCGCAGCCAACATGTCGGATACCAA...AAAATTAAAGTGGCGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS-3UTR CAA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTTCCTTTCTCCCTGTTaGGTGTTAGAAGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGFLSPC*VLEGGG
Trigger: CCCTCCTCCTTCTAACACCAAACAGGGAGAAAGGAA...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTTTCTTCGTTCATGTaGGTAGCAGCTACCGTTCGA +
Preference number: 5 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASLSSFM*VAATVR
Trigger: TCGAACGGTAGCTGCTACCAACATGAACGAAGAAAG...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTTGGTTCACAATCCTTTaGGCTCGGTCTGCATATCTT +
Preference number: 5 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAWFTIL*ARSAYL
Trigger: AAGATATGCAGACCGAGCCAAAAGGATTGTGAACCA...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGCGGATCACTTTTGCGTaGGGGTCCTCATTCACAACA +
Preference number: 5 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGRITFA*GSSFTT
Trigger: TGTTGTGAATGAGGACCCCAACGCAAAAGTGATCCG...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGCAGTTTTGCCAGGCTTaGTCGGAAGAGTTCATCCCT +
Preference number: 5 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGQFCQA*SEEFIP
Trigger: AGGGATGAACTCTTCCGACAAAGCCTGGCAAAACTG...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCAGTTTTGCCAGGCTTaGTCGGAAGAGTTCATCCCT +
Preference number: 5 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVQFCQA*SEEFIP
Trigger: AGGGATGAACTCTTCCGACAAAGCCTGGCAAAACTG...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGAGGTTGTGATTTTCTaGGGCTTCATAGAAAGGGTC +
Preference number: 5 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPEVVIF*GFIERV
Trigger: GACCCTTTCTATGAAGCCCAAGAAAATCACAACCTC...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTGAGGTTGTGATTTTCTaGGGCTTCATAGAAAGGGTC +
Preference number: 5 (lower is better)
Translates to: TETAVQEVSLLLCGLIFAEVVIF*GFIERV
Trigger: GACCCTTTCTATGAAGCCCAAGAAAATCACAACCTC...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTAGGTTTCACCGTGACTaGTACTCTACGGGAATGACC +
Preference number: 5 (lower is better)
Translates to: ALSLLMHTAASQVTQLCSRFHRD*YSTGMT
Trigger: GGTCATTCCCGTAGAGTACAAGTCACGGTGAAACCT...AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCAACTGTCCAGCCCTCTTaGGAGTTTGGTGGACCTGGC +
Preference number: 5 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSTVQPS*EFGGPG
Trigger: GCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGT...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGGTGGAAAGTGCTTCTTaGACTGTGACGGCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: RVICIRSSPANMVKGEPLVESAS*TVTACR
Trigger: CCGGCAGGCCGTCACAGTCAAAGAAGCACTTTCCAC...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp ATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCATTCTCTGGCCAACCCTaGTCATCTTCATCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: MAARGLVAKGIMAPNLQSFSGQP*SSSSKP
Trigger: TGGCTTTGATGAAGATGACAAGGGTTGGCCAGAGAA...TGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGTCCTGCACAGTGATTaGGAGTTTTTCTCAGGGATG +
Preference number: 5 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASVLHSD*EFFSGM
Trigger: CATCCCTGAGAAAAACTCCAAATCACTGTGCAGGAC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGCCGCCTGTTTTATTaGGTAGACTCCTCCTACTGG +
Preference number: 5 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGCRLFY*VDSSYW
Trigger: CCAGTAGGAGGAGTCTACCAAATAAAACAGGCGGCA...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGCCATCGGAGACAGTCTaGCCGCCTGTTTTATTTGGT +
Preference number: 5 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGPSETV*PPVLFG
Trigger: ACCAAATAAAACAGGCGGCAAGACTGTCTCCGATGG...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCCATCGGAGACAGTCTaGCCGCCTGTTTTATTTGGT +
Preference number: 5 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGPSETV*PPVLFG
Trigger: ACCAAATAAAACAGGCGGCAAGACTGTCTCCGATGG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTTCTGTGGGCTCATCTTaGCTGTCACAAACAACTGGA +
Preference number: 5 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASSVGSS*LSQTTG
Trigger: TCCAGTTGTTTGTGACAGCAAAGATGAGCCCACAGA...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCATGCAATCCCAGTGCCTaGGGAGGCTGGGGCAAAAGA +
Preference number: 5 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSCNPSA*GGWGKR
Trigger: TCTTTTGCCCCAGCCTCCCAAGGCACTGGGATTGCA...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS TCA 90 bp CCACATGAGAGGAAAGAGGATCTTCAAATAAGACCACCAAGGGGATaGCCACCAGGCAGACAGGCTTATTATCGGGAAGCCACCATTACT +
Preference number: 5 (lower is better)
Translates to: PHERKEDLQIRPPRG*PPGRQAYYREATIT
Trigger: AGTAATGGTGGCTTCCCGATAATAAGCCTGTCTGCCTGGTGGTCATCCCCTTGGTGGTCTTATTTGAAGATCCTCTTTCCTCTCATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636847.1
CDS GCA 90 bp TGCAAATTCATAGTTATAGTCTGGTTCAGAGGAAGCCTCACTGGCTaGATCCAGGTCATGCTCTGGCGGGCCCGTTTCTTTTTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: CKFIVIVWFRGSLTG*IQVMLWRARFFFKV
Trigger: GACTTTGAAAAAGAAACGGGCCCGCCAGAGCATGACCTGGATGCAGCCAGTGAGGCTTCCTCTGAACCAGACTATAACTATGAATTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS GCA 90 bp CACTTGGTAATCGGTGAGTTTGCTCATTTCCTCAGCCAGGAAGTTTaGTTCCCTCACCAAGGTATTAGCTTTAACCAGCTGCTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: HLVIGEFAHFLSQEV*FPHQGISFNQLLSQ
Trigger: CTGCGAGAGCAGCTGGTTAAAGCTAATACCTTGGTGAGGGAAGCAAACTTCCTGGCTGAGGAAATGAGCAAACTCACCGATTACCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 90 bp TCTGTGCAAATTCATAGTTATAGTCTGGTTCAGAGGAAGCCTCACTaGCTGCATCCAGGTCATGCTCTGGCGGGCCCGTTTCTTTTTCAA +
Preference number: 5 (lower is better)
Translates to: SVQIHSYSLVQRKPH*LHPGHALAGPFLFQ
Trigger: TTGAAAAAGAAACGGGCCCGCCAGAGCATGACCTGGATGCAGCCAGTGAGGCTTCCTCTGAACCAGACTATAACTATGAATTTGCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAAGGGTGCAGGACCGTTaGATTCCCTTCCATCTCCAC +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRERVQDR*IPFHLH
Trigger: GTGGAGATGGAAGGGAATCAAACGGTCCTGCACCCT...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTTTGCCAACCATCCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGAGGGTGCAGGACCGTTaGATTCCCTTCCATCTCCAC +
Preference number: 5 (lower is better)
Translates to: LCQPSIYSYVGSDAIHLTRVQDR*IPFHLH
Trigger: GTGGAGATGGAAGGGAATCAAACGGTCCTGCACCCT...CGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGGATGGTTGGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS-3UTR CAA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTAAGGTTGTAAGCGATTaGTTAATGTTGCTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPAKVVSD*LMLLPS
Trigger: AGAAGGCAGCAACATTAACAAATCGCTTACAACCTT...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGTTGTCATCCCCCACCTaGATACCGGACATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RVICIRSSPANMVKGEPLLSSPT*IPDISR
Trigger: CCTGGAGATGTCCGGTATCAAGGTGGGGGATGACAA...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGGAGCTGCTGGCGGAGTaGCTCCAGTTCCCGCTCATA +
Preference number: 5 (lower is better)
Translates to: LIISQLRSSSQNRLALRQELLAE*LQFPLI
Trigger: TATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCTC...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGCTGCTCTCGCAGTTTaGCCAGGCTTTGTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREAALAV*PGFVGR
Trigger: TCTTCCGACAAAGCCTGGCAAAACTGCGAGAGCAGC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTGATCTGAAGAGTCACTaGGTAATCGGTGAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASDLKSH*VIGEFA
Trigger: AGCAAACTCACCGATTACCAAGTGACTCTTCAGATC...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGCTGGTTCACTCACTATaGCACCTCTCTTCCTATTGG +
Preference number: 5 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGLVHSL*HLSSYW
Trigger: CCAATAGGAAGAGAGGTGCAATAGTGAGTGAACCAG...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp ATGCAGCAGCCAATTCTGCAGGCCAGAGTTAAACTACTGGAGAGATATGACAGGTCCTTTCCTCCTCACTaGGATAGCTGGTTCACTCAC +
Preference number: 5 (lower is better)
Translates to: MQQPILQARVKLLERYDRSFPPH*DSWFTH
Trigger: GTGAGTGAACCAGCTATCCAAGTGAGGAGGAAAGGA...CCTGTCATATCTCTCCAGTAGTTTAACTCTGGCCTGCAGAATTGGCTGCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGAGGTTTCACCGTGACTaGTACTCTACGGGAATGACC +
Preference number: 5 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLRFHRD*YSTGMT
Trigger: GGTCATTCCCGTAGAGTACAAGTCACGGTGAAACCT...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAACCAACAAGCTGCTCATaGGCACTGAGGTCATCCGCA +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREPTSCS*ALRSSA
Trigger: TGCGGATGACCTCAGTGCCAATGAGCAGCTTGTTGG...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGTGGCTGCCATGCTCCTaGGGCAGGATGGAGTTCACG +
Preference number: 5 (lower is better)
Translates to: LIISQLRSSSQNRLALRQWLPCS*GRMEFT
Trigger: CGTGAACTCCATCCTGCCCAAGGAGCATGGCAGCCA...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTACTGGCATGCTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTATCCTCTATCTCCTCAGTaGCCTTTGGTATATTGGATA +
Preference number: 5 (lower is better)
Translates to: LLACCCHCFLRVQCSQGYPLSPQ*PLVYWI
Trigger: TATCCAATATACCAAAGGCAACTGAGGAGATAGAGG...ATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp CTTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTGTGGAAAGTGCTTCTTaGACTGTGACGGCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: LKPTTRQYDRNGSGTYNLVESAS*TVTACR
Trigger: CCGGCAGGCCGTCACAGTCAAAGAAGCACTTTCCAC...AAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTTCTCTGGCCAACCCTaGTCATCTTCATCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGFSGQP*SSSSKP
Trigger: TGGCTTTGATGAAGATGACAAGGGTTGGCCAGAGAA...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGCTGGCTGGCTAATTTaGCTGGGGCAGGCATCTAGT +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREAGWLI*LGQASS
Trigger: ACTAGATGCCTGCCCCAGCAAAATTAGCCAGCCAGC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCCGCCTGTTTTATTaGGTAGACTCCTCCTACTGG +
Preference number: 5 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLCRLFY*VDSSYW
Trigger: CCAGTAGGAGGAGTCTACCAAATAAAACAGGCGGCA...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTGCTACCAGAACACTTaGGGAAAACTGGTAACTAAA +
Preference number: 5 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPACYQNT*GKLVTK
Trigger: TTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCA...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCGCTCTCACCGTGAGGTaGTGCCTCCCTGGTCATTCT +
Preference number: 5 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCALTVR*CLPGHS
Trigger: AGAATGACCAGGGAGGCACAACCTCACGGTGAGAGC...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS TCA 90 bp TCCAGCACACCGGTGGCCCCATACTTCAATGGCCAGTGCTCCATCTaGAATGAACTCCAGAAATTCTTCTGTTACATTCACCACATAGTC +
Preference number: 5 (lower is better)
Translates to: SSTPVAPYFNGQCSI*NELQKFFCYIHHIV
Trigger: GACTATGTGGTGAATGTAACAGAAGAATTTCTGGAGTTCATTTCAGATGGAGCACTGGCCATTGAAGTATGGGGCCACCGGTGTGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS TCA 90 bp GGTCTTTATCCCAGTGTTTGTGGAGGAGCTTCGTCTGAAACCACATaGGAGGAAAGAGGATCTTCAAATAAGACCACCAAGGGGATGACC +
Preference number: 5 (lower is better)
Translates to: GLYPSVCGGASSETT*EERGSSNKTTKGMT
Trigger: GGTCATCCCCTTGGTGGTCTTATTTGAAGATCCTCTTTCCTCTCATGTGGTTTCAGACGAAGCTCCTCCACAAACACTGGGATAAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636847.1
CDS GCA 90 bp CATCAGATGCAATGTCAATCTCACAGTGCTGAGGCTGAATTCCTATaGCAAAAAGCTGGATATCTTGAGAGGTATCTGCACCCACCCTGG +
Preference number: 5 (lower is better)
Translates to: HQMQCQSHSAEAEFL*QKAGYLERYLHPPW
Trigger: CCAGGGTGGGTGCAGATACCTCTCAAGATATCCAGCTTTTTGGCATAGGAATTCAGCCTCAGCACTGTGAGATTGACATTGCATCTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS GCA 90 bp AGTCAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTaGTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTATGTG +
Preference number: 5 (lower is better)
Translates to: SQSSSHVCYCVLLAC*CHCFLRVQCSQGYV
Trigger: CACATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000502297.5
ENST00000636847.1
CDS GCA 90 bp CAGAGTCAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATaGTGCTGCCATTGCTTCCTGAGGGTACAATGCAGCCAGGGTTAT +
Preference number: 5 (lower is better)
Translates to: QSQSSSHVCYCVLLA*CCHCFLRVQCSQGY
Trigger: ATAACCCTGGCTGCATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000502297.5
ENST00000636847.1
CDS-3UTR CAA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTCTTGAAAACCACTTCTaGACCAGCGTATTTTGTAGT +
Preference number: 5 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPLENHF*TSVFCS
Trigger: ACTACAAAATACGCTGGTCAAGAAGTGGTTTTCAAG...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAAATTTGCTTTTACCCTaGCCAGCTGCCTGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRENLLLP*PAAWSA
Trigger: GGCTGACCAGGCAGCTGGCAAGGGTAAAAGCAAATT...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTTATGGTTCTCGGATCACTTTaGCGTTGGGGTCCTCATTCA +
Preference number: 5 (lower is better)
Translates to: GAGGRPKNIAVRFLSVLMVLGSL*RWGPHS
Trigger: TGAATGAGGACCCCAACGCAAAAGTGATCCGAGAAC...CATAAGCACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTAAAAAGCTGGATATCTaGAGAGGTATCTGCACCCAC +
Preference number: 5 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGKKLDI*RGICTH
Trigger: GTGGGTGCAGATACCTCTCAAGATATCCAGCTTTTT...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTGACCTGAACCACATTTaGAACTGGGTCATTACTATT +
Preference number: 5 (lower is better)
Translates to: TETAVQEVSLLLCGLIFADLNHI*NWVITI
Trigger: AATAGTAATGACCCAGTTCAAAATGTGGTTCAGGTC...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGCTGGTTCACTCACTATaGCACCTCTCTTCCTATTGG +
Preference number: 5 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLLVHSL*HLSSYW
Trigger: CCAATAGGAAGAGAGGTGCAATAGTGAGTGAACCAG...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTTTTTCCTTCCATTCTaGGTAAAGGTCTCTCATGTC +
Preference number: 5 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPFFLPF*VKVSHV
Trigger: GACATGAGAGACCTTTACCAAGAATGGAAGGAAAAA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTCCGTAGAGTCTCTTaGCCTCAGGAACTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGFRRVS*PQELFP
Trigger: AGGAAAAAGTTCCTGAGGCAAAGAGACTCTACGGAA...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTGAGGTTGTGATTTTCTaGGGCTTCATAGAAAGGGTC +
Preference number: 5 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGEVVIF*GFIERV
Trigger: GACCCTTTCTATGAAGCCCAAGAAAATCACAACCTC...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGATGACCCTGTCTAAGTaGAAAGATGCCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGMTLSK*KDASCV
Trigger: AACACAGGAGGCATCTTTCAACTTAGACAGGGTCAT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGAGGTTTCACCGTGACTaGTACTCTACGGGAATGACC +
Preference number: 5 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMRFHRD*YSTGMT
Trigger: GGTCATTCCCGTAGAGTACAAGTCACGGTGAAACCT...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAAGCCCTCTTTGGAGTTaGGTGGACCTGGCAGTTACA +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRESPLWS*VDLAVT
Trigger: TGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCT...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGCCAACAAGCTGCTCATaGGCACTGAGGTCATCCGCA +
Preference number: 5 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQPTSCS*ALRSSA
Trigger: TGCGGATGACCTCAGTGCCAATGAGCAGCTTGTTGG...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp CCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCCTCAGTTGCCTTaGGTATATTGGATACTATTT +
Preference number: 5 (lower is better)
Translates to: PKTDLLSDRDSCAGSEPASPQLP*VYWILF
Trigger: AAATAGTATCCAATATACCAAAGGCAACTGAGGAGA...AGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAACGAATGTGCCGGGCTTaGGTGGAAAGTGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRERMCRA*VESASL
Trigger: CAAAGAAGCACTTTCCACCAAAGCCCGGCACATTCG...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTATAACATGCTACATCTaGGTAACTGGAGCTATAGTC +
Preference number: 5 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPITCYI*VTGAIV
Trigger: GACTATAGCTCCAGTTACCAAGATGTAGCATGTTAT...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGGCTTAGAAGAGGCCTaGCTTCCAGGGCTATCCTTT +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREGLEEA*LPGLSF
Trigger: AAAGGATAGCCCTGGAAGCAAGGCCTCTTCTAAGCC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTGGCATGCTGCTGCCATaGCTTCCTGAGGGTACAATG +
Preference number: 5 (lower is better)
Translates to: LKPTTRQYDRNGSGTYNLGMLLP*LPEGTM
Trigger: CATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCC...AAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTCTCACGTTTGCTATaGTGTTCTACTGGCATGCTG +
Preference number: 5 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGFSRLL*CSTGML
Trigger: CAGCATGCCAGTAGAACACAATAGCAAACGTGAGAA...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259711.11
CDS-3UTR CAA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTACTTCTGTCAACTCTTaGTTTGAGGACGGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGTSVNS*FEDGLK
Trigger: TTTCAGGCCGTCCTCAAACAAAGAGTTGACAGAAGT...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGACTTCTGTCAACTCTTaGTTTGAGGACGGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVTSVNS*FEDGLK
Trigger: TTTCAGGCCGTCCTCAAACAAAGAGTTGACAGAAGT...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGATGATGGGCTCCCTTaGGCTAAGGCACTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREDDGLP*AKALFS
Trigger: GGAAAACAGTGCCTTAGCCAAAGGGAGCCCATCATC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGGTCCTGCACAGTGATTaGGAGTTTTTCTCAGGGATG +
Preference number: 5 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLVLHSD*EFFSGM
Trigger: CATCCCTGAGAAAAACTCCAAATCACTGTGCAGGAC...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp ACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTGTGGGCTCATCTTTGCTTGCTACCAGAACACTTaGGGAAAACTGGTAACTAAA +
Preference number: 5 (lower is better)
Translates to: TETAVQEVSLLLCGLIFACYQNT*GKLVTK
Trigger: TTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCA...AGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS TCA 90 bp CACACCGGTGGCCCCATACTTCAATGGCCAGTGCTCCATCTGAAATaGACTCCAGAAATTCTTCTGTTACATTCACCACATAGTCCTTAC +
Preference number: 5 (lower is better)
Translates to: HTGGPILQWPVLHLK*TPEILLLHSPHSPY
Trigger: GTAAGGACTATGTGGTGAATGTAACAGAAGAATTTCTGGAGTTCATTTCAGATGGAGCACTGGCCATTGAAGTATGGGGCCACCGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS-3UTR CAA 90 bp CTTTGCCAACCATCCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGATCTCCACCACGCACTaGGTGTTCAGTTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: LCQPSIYSYVGSDAIHLTISTTH*VFSSSS
Trigger: AGAACTGGAACTGAACACCAAGTGCGTGGTGGAGAT...CGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGGATGGTTGGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS-3UTR CAA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTCTTGAAAACCACTTCTaGACCAGCGTATTTTGTAGT +
Preference number: 5 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASLENHF*TSVFCS
Trigger: ACTACAAAATACGCTGGTCAAGAAGTGGTTTTCAAG...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTGCTTCTAAGGTTGTAAGCGATTaGTTAATGTTGCTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: KTDLLSDRDSCAGSEPASKVVSD*LMLLPS
Trigger: AGAAGGCAGCAACATTAACAAATCGCTTACAACCTT...AGAAGCAGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAACCCCATGCTTTCAAGTaGTCGTTGTCTTTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREPHAFK*SLSFLC
Trigger: GCACAGGAAAGACAACGACAACTTGAAAGCATGGGG...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGAAAAAGCTGGATATCTaGAGAGGTATCTGCACCCAC +
Preference number: 5 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLKKLDI*RGICTH
Trigger: GTGGGTGCAGATACCTCTCAAGATATCCAGCTTTTT...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAACTCAATGGTCCACACTaGGGTGCTCTTTCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRELNGPH*GALSFP
Trigger: AGGAAAGGAAAGAGCACCCAAGTGTGGACCATTGAG...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTTCCGTAGAGTCTCTTaGCCTCAGGAACTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLFRRVS*PQELFP
Trigger: AGGAAAAAGTTCCTGAGGCAAAGAGACTCTACGGAA...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCAGCCCTCTTTGGAGTTaGGTGGACCTGGCAGTTACA +
Preference number: 5 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCSPLWS*VDLAVT
Trigger: TGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCT...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGAACTGTCCAGCCCTCTTaGGAGTTTGGTGGACCTGGC +
Preference number: 5 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRTVQPS*EFGGPG
Trigger: GCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGT...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp GTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGTGCAGGAAGTGAGCCTTCTCCTCAGTTGCCTTaGGTATATTGGATACTATTT +
Preference number: 5 (lower is better)
Translates to: VPKTDLLSDRDSCAGSEPSPQLP*VYWILF
Trigger: AAATAGTATCCAATATACCAAAGGCAACTGAGGAGA...AGGCTCACTTCCTGCACAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGCCTCTATCTCCTCAGTaGCCTTTGGTATATTGGATA +
Preference number: 5 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGPLSPQ*PLVYWI
Trigger: TATCCAATATACCAAAGGCAACTGAGGAGATAGAGG...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGTGGAAAGTGCTTCTTaGACTGTGACGGCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPVESAS*TVTACR
Trigger: CCGGCAGGCCGTCACAGTCAAAGAAGCACTTTCCAC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCGGCTTAGAAGAGGCCTaGCTTCCAGGGCTATCCTTT +
Preference number: 5 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCGLEEA*LPGLSF
Trigger: AAAGGATAGCCCTGGAAGCAAGGCCTCTTCTAAGCC...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp GCACTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTATCTTCTTCTCACGTTaGCTATTGTGTTCTACTGGC +
Preference number: 5 (lower is better)
Translates to: ALSLLMHTAASQVTQLCSIFFSR*LLCSTG
Trigger: GCCAGTAGAACACAATAGCAAACGTGAGAAGAAGAT...AGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAGTGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGACTTCTGTCAACTCTTaGTTTGAGGACGGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLTSVNS*FEDGLK
Trigger: TTTCAGGCCGTCCTCAAACAAAGAGTTGACAGAAGT...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGGTCCTGCACAGTGATTaGGAGTTTTTCTCAGGGATG +
Preference number: 5 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMVLHSD*EFFSGM
Trigger: CATCCCTGAGAAAAACTCCAAATCACTGTGCAGGAC...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAAGATGGGGCTGGTGCTaGCCCAAGGTGACCAGGCGA +
Preference number: 5 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSARWGWC*PKVTRR
Trigger: TCGCCTGGTCACCTTGGGCAAGCACCAGCCCCATCT...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp GGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGAAAAAGCAGAGGCTGTaGATTCACCCAAGTGACAAA +
Preference number: 5 (lower is better)
Translates to: GGGAGGRPKNIAVRFLSVKKQRL*IHPSDK
Trigger: TTTGTCACTTGGGTGAATCAACAGCCTCTGCTTTTT...CACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp ATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGTCATACTCCTGGCTGTCCTaGTGTTTTCTTACAGTAATA +
Preference number: 5 (lower is better)
Translates to: MAARGLVAKGIMAPNLQSYSWLS*CFLTVI
Trigger: TATTACTGTAAGAAAACACAAGGACAGCCAGGAGTA...TGACTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS GCA 90 bp CTCAGCTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTaGTCTATTCTGCATAGTACAGACAAGTCAAGCATTTACCTCCTG +
Preference number: 5 (lower is better)
Translates to: LSLLMHTAASQVTQL*SILHSTDKSSIYLL
Trigger: CAGGAGGTAAATGCTTGACTTGTCTGTACTATGCAGAATAGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAGCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS CCA 90 bp TCTGCTCTATTCTGCATAGTACAGACAAGTCAAGCATTTACCTCCTaGCTTAGAAGAGGCCTTGCTTCCAGGGCTATCCTTTTCTTATGC +
Preference number: 5 (lower is better)
Translates to: SALFCIVQTSQAFTS*LRRGLASRAILFLC
Trigger: GCATAAGAAAAGGATAGCCCTGGAAGCAAGGCCTCTTCTAAGCCAGGAGGTAAATGCTTGACTTGTCTGTACTATGCAGAATAGAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp AACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTCTTGAAAACCACTTCTaGACCAGCGTATTTTGTAGT +
Preference number: 5 (lower is better)
Translates to: NNWMNLSYQVVAVKGLWGLENHF*TSVFCS
Trigger: ACTACAAAATACGCTGGTCAAGAAGTGGTTTTCAAG...ACCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAACTTTCTTCGTTCATGTaGGTAGCAGCTACCGTTCGA +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRELSSFM*VAATVR
Trigger: TCGAACGGTAGCTGCTACCAACATGAACGAAGAAAG...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGCGGATCACTTTTGCGTaGGGGTCCTCATTCACAACA +
Preference number: 5 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQRITFA*GSSFTT
Trigger: TGTTGTGAATGAGGACCCCAACGCAAAAGTGATCCG...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGTTTTTCCTTCCATTCTaGGTAAAGGTCTCTCATGTC +
Preference number: 5 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGFFLPF*VKVSHV
Trigger: GACATGAGAGACCTTTACCAAGAATGGAAGGAAAAA...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTGCTTATGATGACCCTGTCTAAGTaGAAAGATGCCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: GAGGRPKNIAVRFLSVLMMTLSK*KDASCV
Trigger: AACACAGGAGGCATCTTTCAACTTAGACAGGGTCAT...CATAAGCACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCCCAACAAGCTGCTCATaGGCACTGAGGTCATCCGCA +
Preference number: 5 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPPTSCS*ALRSSA
Trigger: TGCGGATGACCTCAGTGCCAATGAGCAGCTTGTTGG...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGCCAACAAGCTGCTCATaGGCACTGAGGTCATCCGCA +
Preference number: 5 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLPTSCS*ALRSSA
Trigger: TGCGGATGACCTCAGTGCCAATGAGCAGCTTGTTGG...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGTGGCTGCCATGCTCCTaGGGCAGGATGGAGTTCACG +
Preference number: 5 (lower is better)
Translates to: RSPVPYDFLQITFICILVWLPCS*GRMEFT
Trigger: CGTGAACTCCATCCTGCCCAAGGAGCATGGCAGCCA...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp CCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCTTCTCATTCTCTGGCCAACCCTaGTCATCTTCATCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: PPPGNMTEMVPELTIFFSFSGQP*SSSSKP
Trigger: TGGCTTTGATGAAGATGACAAGGGTTGGCCAGAGAA...TGAGAAGAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp AAACAACTGGATGAATCTTTCCTACCAAGTTGTTGCGGTGAAGGGCCTCTGGGGATAACATGCTACATCTaGGTAACTGGAGCTATAGTC +
Preference number: 5 (lower is better)
Translates to: KQLDESFLPSCCGEGPLGITCYI*VTGAIV
Trigger: GACTATAGCTCCAGTTACCAAGATGTAGCATGTTAT...CCCCAGAGGCCCTTCACCGCAACAACTTGGTAGGAAAGATTCATCCAGTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGGCATGCTGCTGCCATaGCTTCCTGAGGGTACAATG +
Preference number: 5 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPGMLLP*LPEGTM
Trigger: CATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259711.11
CDS-3UTR CAA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGTTCTCACGTTTGCTATaGTGTTCTACTGGCATGCTG +
Preference number: 5 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMFSRLL*CSTGML
Trigger: CAGCATGCCAGTAGAACACAATAGCAAACGTGAGAA...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502297.5
CDS-3UTR CAA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGGATGATGGGCTCCCTTaGGCTAAGGCACTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: LIISQLRSSSQNRLALRQDDGLP*AKALFS
Trigger: GGAAAACAGTGCCTTAGCCAAAGGGAGCCCATCATC...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTGCCGCCTGTTTTATTaGGTAGACTCCTCCTACTGG +
Preference number: 5 (lower is better)
Translates to: VICIRSSPANMVKGEPLNCRLFY*VDSSYW
Trigger: CCAGTAGGAGGAGTCTACCAAATAAAACAGGCGGCA...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCTGGTCATTCTCTAACTaGGAATGCAGCTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFWSFSN*ECSWLG
Trigger: CCCCAGCCAGCTGCATTCCAAGTTAGAGAATGACCA...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAATCTGTGGGCTCATCTTaGCTGTCACAAACAACTGGA +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPRESVGSS*LSQTTG
Trigger: TCCAGTTGTTTGTGACAGCAAAGATGAGCCCACAGA...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp TTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTCGGGCAAAAGAATCACTaGAGGCCAGGAGTTTCAGAC +
Preference number: 5 (lower is better)
Translates to: LNPPPGNMTEMVPELTIFGQKNH*RPGVSD
Trigger: GTCTGAAACTCCTGGCCTCAAGTGATTCTTTTGCCC...GAAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp AGAATGGCAGCACGTGGCTTGGTAGCCAAGGGAATTATGGCACCAAACTTGCAGATTATGGCACCAAACTaGCAGTCAAACATACATGTT +
Preference number: 5 (lower is better)
Translates to: RMAARGLVAKGIMAPNLQIMAPN*QSNIHV
Trigger: AACATGTATGTTTGACTGCAAGTTTGGTGCCATAAT...CTGCAAGTTTGGTGCCATAATTCCCTTGGCTACCAAGCCACGTGCTGCCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGGTAAAGGGTGAACCATaGAACTTCATAGCTCAGTCC +
Preference number: 5 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMVKGEP*NFIAQS
Trigger: GGACTGAGCTATGAAGTTCAATGGTTCACCCTTTAC...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS CCA 90 bp TCAAAATCTTTTCCCTCTGACACTCCCATAAATTCTGTGAAAGAATaGTCTTCAAGGATGTTGGTGGTGTGTTCTACCGTCACCTCCCTG +
Preference number: 5 (lower is better)
Translates to: SKSFPSDTPINSVKE*SSRMLVVCSTVTSL
Trigger: CAGGGAGGTGACGGTAGAACACACCACCAACATCCTTGAAGACCATTCTTTCACAGAATTTATGGGAGTGTCAGAGGGAAAAGATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS-3UTR CAA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGATCTCCACCACGCACTaGGTGTTCAGTTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: LIISQLRSSSQNRLALRQISTTH*VFSSSS
Trigger: AGAACTGGAACTGAACACCAAGTGCGTGGTGGAGAT...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGTTCCTTTCTCCCTGTTaGGTGTTAGAAGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: LIISQLRSSSQNRLALRQFLSPC*VLEGGG
Trigger: CCCTCCTCCTTCTAACACCAAACAGGGAGAAAGGAA...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGTGTGTGATTATGATGTaGAACACAGCATGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQCVIMM*NTAWER
Trigger: CCGCTCCCATGCTGTGTTCAACATCATAATCACACA...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAATGGTTCACAATCCTTTaGGCTCGGTCTGCATATCTT +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREWFTIL*ARSAYL
Trigger: AAGATATGCAGACCGAGCCAAAAGGATTGTGAACCA...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AGGGTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGTGGTTCACAATCCTTTaGGCTCGGTCTGCATATCTT +
Preference number: 5 (lower is better)
Translates to: RVICIRSSPANMVKGEPLWFTIL*ARSAYL
Trigger: AAGATATGCAGACCGAGCCAAAAGGATTGTGAACCA...CAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGCTTTCAAGTTGTCGTaGTCTTTCCTGTGCTATCTC +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREAFKLS*SFLCYL
Trigger: GAGATAGCACAGGAAAGACAACGACAACTTGAAAGC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp TCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGACAGCTGGACCTGAACCACATTTaGAACTGGGTCATTACTATT +
Preference number: 5 (lower is better)
Translates to: SQLRSSSQNRLALRQRQLDLNHI*NWVITI
Trigger: AATAGTAATGACCCAGTTCAAAATGTGGTTCAGGTC...CAGCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAGATCTGAAGAGTCACTaGGTAATCGGTGAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREDLKSH*VIGEFA
Trigger: AGCAAACTCACCGATTACCAAGTGACTCTTCAGATC...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGCACCTCTCTTCCTATaGGCACTGAGGTTTGCAGCA +
Preference number: 5 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPAPLFL*ALRFAA
Trigger: TGCTGCAAACCTCAGTGCCAATAGGAAGAGAGGTGC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGTCCTTTCCTCCTCACTaGGATAGCTGGTTCACTCAC +
Preference number: 5 (lower is better)
Translates to: LIISQLRSSSQNRLALRQSFPPH*DSWFTH
Trigger: GTGAGTGAACCAGCTATCCAAGTGAGGAGGAAAGGA...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GCAACAACAAACAAGAGATTCTACCATGACTCTGCATGCTTGAGAAAGAGGAATCTCAATGGTCCACACTaGGGTGCTCTTTCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: ATTNKRFYHDSACLRKRNLNGPH*GALSFP
Trigger: AGGAAAGGAAAGAGCACCCAAGTGTGGACCATTGAG...ATTCCTCTTTCTCAAGCATGCAGAGTCATGGTAGAATCTCTTGTTTGTTGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp ACCTGTGGCAAAATATATATAAGCCATCCTGAATGCAAGGCTGGCACCAAGGTAATGACCCTGTCTAAGTaGAAAGATGCCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: TCGKIYISHPECKAGTKVMTLSK*KDASCV
Trigger: AACACAGGAGGCATCTTTCAACTTAGACAGGGTCAT...TACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAAATGACCCTGTCTAAGTaGAAAGATGCCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREMTLSK*KDASCV
Trigger: AACACAGGAGGCATCTTTCAACTTAGACAGGGTCAT...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCAGGTTTCACCGTGACTaGTACTCTACGGGAATGACC +
Preference number: 5 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFRFHRD*YSTGMT
Trigger: GGTCATTCCCGTAGAGTACAAGTCACGGTGAAACCT...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGAGGTTTCACCGTGACTaGTACTCTACGGGAATGACC +
Preference number: 5 (lower is better)
Translates to: LIISQLRSSSQNRLALRQRFHRD*YSTGMT
Trigger: GGTCATTCCCGTAGAGTACAAGTCACGGTGAAACCT...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AGGTGGAGGGGCAGGTGGAAGACCAAAGAATATAGCTGTGAGATTTCTCAGTGTATAACATGCTACATCTaGGTAACTGGAGCTATAGTC +
Preference number: 5 (lower is better)
Translates to: RWRGRWKTKEYSCEISQCITCYI*VTGAIV
Trigger: GACTATAGCTCCAGTTACCAAGATGTAGCATGTTAT...ACACTGAGAAATCTCACAGCTATATTCTTTGGTCTTCCACCTGCCCCTCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp ACCTGTGGCAAAATATATATAAGCCATCCTGAATGCAAGGCTGGCACCAAGGTATTCTCACGTTTGCTATaGTGTTCTACTGGCATGCTG +
Preference number: 5 (lower is better)
Translates to: TCGKIYISHPECKAGTKVFSRLL*CSTGML
Trigger: CAGCATGCCAGTAGAACACAATAGCAAACGTGAGAA...TACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGATGATGGGCTCCCTTaGGCTAAGGCACTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPDDGLP*AKALFS
Trigger: GGAAAACAGTGCCTTAGCCAAAGGGAGCCCATCATC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGAGATGATGGGCTCCCTTaGGCTAAGGCACTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRDDGLP*AKALFS
Trigger: GGAAAACAGTGCCTTAGCCAAAGGGAGCCCATCATC...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCGTCCTGCACAGTGATTaGGAGTTTTTCTCAGGGATG +
Preference number: 5 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCVLHSD*EFFSGM
Trigger: CATCCCTGAGAAAAACTCCAAATCACTGTGCAGGAC...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCTGCCGCCTGTTTTATTaGGTAGACTCCTCCTACTGG +
Preference number: 5 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFCRLFY*VDSSYW
Trigger: CCAGTAGGAGGAGTCTACCAAATAAAACAGGCGGCA...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGCCATCGGAGACAGTCTaGCCGCCTGTTTTATTTGGT +
Preference number: 5 (lower is better)
Translates to: LIISQLRSSSQNRLALRQPSETV*PPVLFG
Trigger: ACCAAATAAAACAGGCGGCAAGACTGTCTCCGATGG...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCCCATCGGAGACAGTCTaGCCGCCTGTTTTATTTGGT +
Preference number: 5 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFPSETV*PPVLFG
Trigger: ACCAAATAAAACAGGCGGCAAGACTGTCTCCGATGG...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGTTCCCAAAACAGACTaGCTCTCCGACAGAGACAGC +
Preference number: 5 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPVPKTD*LSDRDS
Trigger: GCTGTCTCTGTCGGAGAGCAAGTCTGTTTTGGGAAC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GCAACAACAAACAAGAGATTCTACCATGACTCTGCATGCTTGAGAAAGAGGAATCATGCAGCACTCAGCTaGTTAATGCACACTGCTGCT +
Preference number: 5 (lower is better)
Translates to: ATTNKRFYHDSACLRKRNHAALS*LMHTAA
Trigger: AGCAGCAGTGTGCATTAACAAGCTGAGTGCTGCATG...ATTCCTCTTTCTCAAGCATGCAGAGTCATGGTAGAATCTCTTGTTTGTTGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp ACCTGTGGCAAAATATATATAAGCCATCCTGAATGCAAGGCTGGCACCAAGGTAGCTGGCACCAAGGTATaGGAATATATTTTGCCAGCT +
Preference number: 5 (lower is better)
Translates to: TCGKIYISHPECKAGTKVAGTKV*EYILPA
Trigger: AGCTGGCAAAATATATTCCAATACCTTGGTGCCAGC...TACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp ACCTGTGGCAAAATATATATAAGCCATCCTGAATGCAAGGCTGGCACCAAGGTACTAAGGAATGAGGTTTaGTGGGTAGAGTTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: TCGKIYISHPECKAGTKVLRNEV*WVEFQP
Trigger: AGGCTGAAACTCTACCCACAAAACCTCATTCCTTAG...TACCTTGGTGCCAGCCTTGCATTCAGGATGGCTTATATATATTTTGCCACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACAAGAGATCGCCCAAGTaGCTTTGTAACGAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: VICIRSSPANMVKGEPLNKRSPK*LCNEVQ
Trigger: CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTT...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp CCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGCCACTTTAATTTTAGCCTTTCTCCCTGTTaGGTGTTAGAAGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: PFIHMWGLMQFTSRHFNFSLSPC*VLEGGG
Trigger: CCCTCCTCCTTCTAACACCAAACAGGGAGAAAGGCT...AAAATTAAAGTGGCGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS GCA 90 bp CATTCGTTTTCTAAGAATGATGGCCGCCAGTTCCATCCATGTTCCTaGAAAGGACACGATCTTGTTGTTTTTCATGGCTGCATAGTATTC +
Preference number: 5 (lower is better)
Translates to: HSFSKNDGRQFHPCS*KGHDLVVFHGCIVF
Trigger: GAATACTATGCAGCCATGAAAAACAACAAGATCGTGTCCTTTGCAGGAACATGGATGGAACTGGCGGCCATCATTCTTAGAAAACGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503342.1
CDS-3UTR CAA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGACGGCAACTTTTACCTaGGTATCCGACATGTTGGCT +
Preference number: 5 (lower is better)
Translates to: LIISQLRSSSQNRLALRQTATFT*VSDMLA
Trigger: AGCCAACATGTCGGATACCAAGGTAAAAGTTGCCGT...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGTTCTCGGATCACTTTaGCGTTGGGGTCCTCATTCA +
Preference number: 5 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPVLGSL*RWGPHS
Trigger: TGAATGAGGACCCCAACGCAAAAGTGATCCGAGAAC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp ATTTTACAAATGAAGACACGACAGCAGGGTCATCTGTATTCGATCATCTCCTGCGCTTTCAAGTTGTCGTaGTCTTTCCTGTGCTATCTC +
Preference number: 5 (lower is better)
Translates to: ILQMKTRQQGHLYSIISCAFKLS*SFLCYL
Trigger: GAGATAGCACAGGAAAGACAACGACAACTTGAAAGC...GCAGGAGATGATCGAATACAGATGACCCTGCTGTCGTGTCTTCATTTGTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGTTGTCATCCCCCACCTaGATACCGGACATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLLSSPT*IPDISR
Trigger: CCTGGAGATGTCCGGTATCAAGGTGGGGGATGACAA...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGGCTGCTCTCGCAGTTTaGCCAGGCTTTGTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: RSPVPYDFLQITFICILVAALAV*PGFVGR
Trigger: TCTTCCGACAAAGCCTGGCAAAACTGCGAGAGCAGC...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGCTGCTCTCGCAGTTTaGCCAGGCTTTGTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLAALAV*PGFVGR
Trigger: TCTTCCGACAAAGCCTGGCAAAACTGCGAGAGCAGC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTTGTTAATGCACACTGCTGCTTCACAGGTGACACAACTCTGCTCTATTCTGCATTTTTCCTTCCATTCTaGGTAAAGGTCTCTCATGTC +
Preference number: 5 (lower is better)
Translates to: LVNAHCCFTGDTTLLYSAFFLPF*VKVSHV
Trigger: GACATGAGAGACCTTTACCAAGAATGGAAGGAAAAA...TGCAGAATAGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp CTTAAACCCACCACCAGGCAATATGACAGAAATGGTTCCGGAACTTACAATCTTGAGGTTGTGATTTTCTaGGGCTTCATAGAAAGGGTC +
Preference number: 5 (lower is better)
Translates to: LKPTTRQYDRNGSGTYNLEVVIF*GFIERV
Trigger: GACCCTTTCTATGAAGCCCAAGAAAATCACAACCTC...AAGATTGTAAGTTCCGGAACCATTTCTGTCATATTGCCTGGTGGTGGGTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGGGCATGCTGCTGCCATaGCTTCCTGAGGGTACAATG +
Preference number: 5 (lower is better)
Translates to: RSPVPYDFLQITFICILVGMLLP*LPEGTM
Trigger: CATTGTACCCTCAGGAAGCAATGGCAGCAGCATGCC...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502297.5
CDS-3UTR CAA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGCTGGCTGGCTAATTTaGCTGGGGCAGGCATCTAGT +
Preference number: 5 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLAGWLI*LGQASS
Trigger: ACTAGATGCCTGCCCCAGCAAAATTAGCCAGCCAGC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGGCATGCTGCTGCCATTGCAACTACAGAATTATCTaGGCAATAGCATCAGGCAAC +
Preference number: 5 (lower is better)
Translates to: QSSSHVCYCVLLACCCHCNYRII*AIASGN
Trigger: GTTGCCTGATGCTATTGCCAAGATAATTCTGTAGTT...GCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACGTAAAGGGTGAACCATaGAACTTCATAGCTCAGTCC +
Preference number: 5 (lower is better)
Translates to: VICIRSSPANMVKGEPLNVKGEP*NFIAQS
Trigger: GGACTGAGCTATGAAGTTCAATGGTTCACCCTTTAC...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp ACACACATTCCTTTCTTATACCCCATTTGTTGGATGAATGCCCCACAGGATTTTTGGGGTTTTGCCATGTaGCAAAGGCTGGTCTTGAAA +
Preference number: 5 (lower is better)
Translates to: THIPFLYPICWMNAPQDFWGFAM*QRLVLK
Trigger: TTTCAAGACCAGCCTTTGCAACATGGCAAAACCCCA...AAAATCCTGTGGGGCATTCATCCAACAAATGGGGTATAAGAAAGGAATGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS-3UTR CAA 90 bp CTTTGCCAACCATCCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGTTTCTTATACCCCATTaGTTGGATGAATGCCCCACA +
Preference number: 5 (lower is better)
Translates to: LCQPSIYSYVGSDAIHLTFLIPH*LDECPT
Trigger: TGTGGGGCATTCATCCAACAAATGGGGTATAAGAAA...CGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGGATGGTTGGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS GCA 90 bp GAAGCCACCATTACTATTCAGGGTTTTCATGATAACTTCCATCTGTaGAAATTCATAGTTATAGTCTGGTTCAGAGGAAGCCTCACTGGC +
Preference number: 5 (lower is better)
Translates to: EATITIQGFHDNFHL*KFIVIVWFRGSLTG
Trigger: GCCAGTGAGGCTTCCTCTGAACCAGACTATAACTATGAATTTGCACAGATGGAAGTTATCATGAAAACCCTGAATAGTAATGGTGGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636847.1
CDS-3UTR CAA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCACGGCAACTTTTACCTaGGTATCCGACATGTTGGCT +
Preference number: 5 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPTATFT*VSDMLA
Trigger: AGCCAACATGTCGGATACCAAGGTAAAAGTTGCCGT...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGCCACTTTAATTTTACGGCAACTTTTACCTaGGTATCCGACATGTTGGCT +
Preference number: 5 (lower is better)
Translates to: PFIHMWGLMQFTSRHFNFTATFT*VSDMLA
Trigger: AGCCAACATGTCGGATACCAAGGTAAAAGTTGCCGT...AAAATTAAAGTGGCGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS-3UTR CAA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCTGTGTGATTATGATGTaGAACACAGCATGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPCVIMM*NTAWER
Trigger: CCGCTCCCATGCTGTGTTCAACATCATAATCACACA...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp GCAACAACAAACAAGAGATTCTACCATGACTCTGCATGCTTGAGAAAGAGGAATGATCTGAAGAGTCACTaGGTAATCGGTGAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: ATTNKRFYHDSACLRKRNDLKSH*VIGEFA
Trigger: AGCAAACTCACCGATTACCAAGTGACTCTTCAGATC...ATTCCTCTTTCTCAAGCATGCAGAGTCATGGTAGAATCTCTTGTTTGTTGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAGCACCTCTCTTCCTATaGGCACTGAGGTTTGCAGCA +
Preference number: 5 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAAPLFL*ALRFAA
Trigger: TGCTGCAAACCTCAGTGCCAATAGGAAGAGAGGTGC...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp GGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAGGGAATTTTTCCTTCCATTCTaGGTAAAGGTCTCTCATGTC +
Preference number: 5 (lower is better)
Translates to: GRCYQNTLGKLVTKHPREFFLPF*VKVSHV
Trigger: GACATGAGAGACCTTTACCAAGAATGGAAGGAAAAA...TTCCCTGGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGTTCCGTAGAGTCTCTTaGCCTCAGGAACTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LIISQLRSSSQNRLALRQFRRVS*PQELFP
Trigger: AGGAAAAAGTTCCTGAGGCAAAGAGACTCTACGGAA...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGTGGTCATTCTCTAACTaGGAATGCAGCTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RSPVPYDFLQITFICILVWSFSN*ECSWLG
Trigger: CCCCAGCCAGCTGCATTCCAAGTTAGAGAATGACCA...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp CCAGGCAACTGTGGAGTCAGGACCCCAGTCATTGTCAACAGTTATAATACAATGAAACAGATTAGAGCATaGACTCCAGATTCTACAGTA +
Preference number: 5 (lower is better)
Translates to: PGNCGVRTPVIVNSYNTMKQIRA*TPDSTV
Trigger: TACTGTAGAATCTGGAGTCAATGCTCTAATCTGTTT...CATTGTATTATAACTGTTGACAATGACTGGGGTCCTGACTCCACAGTTGCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp CCATTTATTCATATGTGGGGTCTGATGCAATTCACCTCACGCCACTTTAATTTTCTTATACCCCATTTGTaGGATGAATGCCCCACAGGA +
Preference number: 5 (lower is better)
Translates to: PFIHMWGLMQFTSRHFNFLIPHL*DECPTG
Trigger: TCCTGTGGGGCATTCATCCAACAAATGGGGTATAAG...AAAATTAAAGTGGCGTGAGGTGAATTGCATCAGACCCCACATATGAATAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502704.2
CDS GCA 90 bp AACTGGGTCATTACTATTCAGGGTTTTCATGATAACTTCCATCTGTaGAAATTCATAGTTATAGTCTGGTTCAGAGGAAGCCTCACTGGC +
Preference number: 5 (lower is better)
Translates to: NWVITIQGFHDNFHL*KFIVIVWFRGSLTG
Trigger: GCCAGTGAGGCTTCCTCTGAACCAGACTATAACTATGAATTTGCACAGATGGAAGTTATCATGAAAACCCTGAATAGTAATGACCCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGATCTCCACCACGCACTaGGTGTTCAGTTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: RSPVPYDFLQITFICILVISTTH*VFSSSS
Trigger: AGAACTGGAACTGAACACCAAGTGCGTGGTGGAGAT...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGTTCTCGGATCACTTTaGCGTTGGGGTCCTCATTCA +
Preference number: 5 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLVLGSL*RWGPHS
Trigger: TGAATGAGGACCCCAACGCAAAAGTGATCCGAGAAC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCGCTTTCAAGTTGTCGTaGTCTTTCCTGTGCTATCTC +
Preference number: 5 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPAFKLS*SFLCYL
Trigger: GAGATAGCACAGGAAAGACAACGACAACTTGAAAGC...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAAAAAGCTGGATATCTaGAGAGGTATCTGCACCCAC +
Preference number: 5 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPKKLDI*RGICTH
Trigger: GTGGGTGCAGATACCTCTCAAGATATCCAGCTTTTT...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCACTCAATGGTCCACACTaGGGTGCTCTTTCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSALNGPH*GALSFP
Trigger: AGGAAAGGAAAGAGCACCCAAGTGTGGACCATTGAG...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGTTCCGTAGAGTCTCTTaGCCTCAGGAACTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLFRRVS*PQELFP
Trigger: AGGAAAAAGTTCCTGAGGCAAAGAGACTCTACGGAA...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp TTTCATCTGCTCATGTATAAGAGATCGCCCAAGTTGCTTTGTAACGAAGTCCAGATAACATGCTACATCTaGGTAACTGGAGCTATAGTC +
Preference number: 5 (lower is better)
Translates to: FHLLMYKRSPKLLCNEVQITCYI*VTGAIV
Trigger: GACTATAGCTCCAGTTACCAAGATGTAGCATGTTAT...CTGGACTTCGTTACAAAGCAACTTGGGCGATCTCTTATACATGAGCAGATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCATCTTCTTCTCACGTTaGCTATTGTGTTCTACTGGC +
Preference number: 5 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFIFFSR*LLCSTG
Trigger: GCCAGTAGAACACAATAGCAAACGTGAGAAGAAGAT...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502297.5
CDS-3UTR CAA 90 bp GTCATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTCAGGACCCCAGTCATaGTCAACAGTTATAATACAA +
Preference number: 5 (lower is better)
Translates to: VICIRSSPANMVKGEPLNSGPQS*STVIIQ
Trigger: TTGTATTATAACTGTTGACAATGACTGGGGTCCTGA...GTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS TCA 90 bp CTCTCCAGCAGAAGAATCTGTCAAACCATCAAAATCTTTTCCCTCTaGCACTCCCATAAATTCTGTGAAAGAATGGTCTTCAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: LSSRRICQTIKIFSL*HSHKFCERMVFKDV
Trigger: AACATCCTTGAAGACCATTCTTTCACAGAATTTATGGGAGTGTCAGAGGGAAAAGATTTTGATGGTTTGACAGATTCTTCTGCTGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS-3UTR CAA 90 bp ATCTGTATTCGATCATCTCCTGCAAACATGGTAAAGGGTGAACCATTGAACTTCGACCTGAACCACATTTaGAACTGGGTCATTACTATT +
Preference number: 5 (lower is better)
Translates to: ICIRSSPANMVKGEPLNFDLNHI*NWVITI
Trigger: AATAGTAATGACCCAGTTCAAAATGTGGTTCAGGTC...GAAGTTCAATGGTTCACCCTTTACCATGTTTGCAGGAGATGATCGAATACAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp CTTATAATTTCACAATTGCGTTCTAGTTCCCAAAACAGACTTGCTCTCCGACAGGACCTGAACCACATTTaGAACTGGGTCATTACTATT +
Preference number: 5 (lower is better)
Translates to: LIISQLRSSSQNRLALRQDLNHI*NWVITI
Trigger: AATAGTAATGACCCAGTTCAAAATGTGGTTCAGGTC...CTGTCGGAGAGCAAGTCTGTTTTGGGAACTAGAACGCAATTGTGAAATTATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGTTCTCTGGCCAACCCTaGTCATCTTCATCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLFSGQP*SSSSKP
Trigger: TGGCTTTGATGAAGATGACAAGGGTTGGCCAGAGAA...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGTTCTCTGGCCAACCCTaGTCATCTTCATCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: RSPVPYDFLQITFICILVFSGQP*SSSSKP
Trigger: TGGCTTTGATGAAGATGACAAGGGTTGGCCAGAGAA...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp GCAACAACAAACAAGAGATTCTACCATGACTCTGCATGCTTGAGAAAGAGGAATATAACATGCTACATCTaGGTAACTGGAGCTATAGTC +
Preference number: 5 (lower is better)
Translates to: ATTNKRFYHDSACLRKRNITCYI*VTGAIV
Trigger: GACTATAGCTCCAGTTACCAAGATGTAGCATGTTAT...ATTCCTCTTTCTCAAGCATGCAGAGTCATGGTAGAATCTCTTGTTTGTTGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp AAATATGGTAGATGCTACCAGAACACTTTGGGAAAACTGGTAACTAAACATCCCAAGGTTGTAAGCGATTaGTTAATGTTGCTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: KYGRCYQNTLGKLVTKHPKVVSD*LMLLPS
Trigger: AGAAGGCAGCAACATTAACAAATCGCTTACAACCTT...GGGATGTTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCATCTACCATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAAAAAAGCTGGATATCTaGAGAGGTATCTGCACCCAC +
Preference number: 5 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAKKLDI*RGICTH
Trigger: GTGGGTGCAGATACCTCTCAAGATATCCAGCTTTTT...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGGATCTGAAGAGTCACTaGGTAATCGGTGAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLDLKSH*VIGEFA
Trigger: AGCAAACTCACCGATTACCAAGTGACTCTTCAGATC...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp TTTATAGCTGTACATCCAGACCGATTATACAGGCATCTACAGAATAGGTACAGATTTTTCCTTCCATTCTaGGTAAAGGTCTCTCATGTC +
Preference number: 5 (lower is better)
Translates to: FIAVHPDRLYRHLQNRYRFFLPF*VKVSHV
Trigger: GACATGAGAGACCTTTACCAAGAATGGAAGGAAAAA...TCTGTACCTATTCTGTAGATGCCTGTATAATCGGTCTGGATGTACAGCTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378814.9
CDS-3UTR CAA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGATGACCCTGTCTAAGTaGAAAGATGCCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLMTLSK*KDASCV
Trigger: AACACAGGAGGCATCTTTCAACTTAGACAGGGTCAT...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGATGACCCTGTCTAAGTaGAAAGATGCCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: RSPVPYDFLQITFICILVMTLSK*KDASCV
Trigger: AACACAGGAGGCATCTTTCAACTTAGACAGGGTCAT...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGACTTCTGTCAACTCTTaGTTTGAGGACGGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLTSVNS*FEDGLK
Trigger: TTTCAGGCCGTCCTCAAACAAAGAGTTGACAGAAGT...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp AAATGGTTCCGGAACTTACAATCTTCTTCTCACGTTTGCTATTGTGTTCTACTGTCTCCTCAGTTGCCTTaGGTATATTGGATACTATTT +
Preference number: 5 (lower is better)
Translates to: KWFRNLQSSSHVCYCVLLSPQLP*VYWILF
Trigger: AAATAGTATCCAATATACCAAAGGCAACTGAGGAGA...CAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGTAAGTTCCGGAACCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS-3UTR CAA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGCCTCTATCTCCTCAGTaGCCTTTGGTATATTGGATA +
Preference number: 5 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLPLSPQ*PLVYWI
Trigger: TATCCAATATACCAAAGGCAACTGAGGAGATAGAGG...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCAAAAAAGCAGAGGCTGTaGATTCACCCAAGTGACAAA +
Preference number: 5 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSAKKQRL*IHPSDK
Trigger: TTTGTCACTTGGGTGAATCAACAGCCTCTGCTTTTT...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGTGCTACCAGAACACTTaGGGAAAACTGGTAACTAAA +
Preference number: 5 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLCYQNT*GKLVTK
Trigger: TTTAGTTACCAGTTTTCCCAAAGTGTTCTGGTAGCA...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGTACTCCTGGCTGTCCTaGTGTTTTCTTACAGTAATA +
Preference number: 5 (lower is better)
Translates to: RSPVPYDFLQITFICILVYSWLS*CFLTVI
Trigger: TATTACTGTAAGAAAACACAAGGACAGCCAGGAGTA...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp ATCAAAGGAATCACAGATTTGATGAAATATGGTAGATGCTACCAGAACACTTTGTCTCCTCAGTTGCCTTaGGTATATTGGATACTATTT +
Preference number: 5 (lower is better)
Translates to: IKGITDLMKYGRCYQNTLSPQLP*VYWILF
Trigger: AAATAGTATCCAATATACCAAAGGCAACTGAGGAGA...CAAAGTGTTCTGGTAGCATCTACCATATTTCATCAAATCTGTGATTCCTTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
CDS-3UTR CAA 90 bp CTTTGTAACGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATCTCCTCAGTTGCCTTaGGTATATTGGATACTATTT +
Preference number: 5 (lower is better)
Translates to: LCNEVQYLMIFYKSPLSASPQLP*VYWILF
Trigger: AAATAGTATCCAATATACCAAAGGCAACTGAGGAGA...TGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCGTTACAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS-3UTR CAA 90 bp CGAAGTCCAGTACCTTATGATTTTCTACAAATCACCTTTATCTGCATTTTAGTGAAACAGATTAGAGCATaGACTCCAGATTCTACAGTA +
Preference number: 5 (lower is better)
Translates to: RSPVPYDFLQITFICILVKQIRA*TPDSTV
Trigger: TACTGTAGAATCTGGAGTCAATGCTCTAATCTGTTT...CACTAAAATGCAGATAAAGGTGATTTGTAGAAAATCATAAGGTACTGGACTTCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS GCA 72 bp CTGCCCACTGGGTCACCTTCTGCTGCGCTGTCTGGCTaGTGTAGGCCAGGCGGTCAGGGCCGCTACTCTGTG +
Preference number: 6 (lower is better)
Translates to: LPTGSPSAALSG*CRPGGQGRYSV
Trigger: CACAGAGTAGCGGCCCTGACCGCCTGGCCTACAGCAGCCAGACAGCGCAGCAGAAGGTGACCCAGTGGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000503342.1
ENST00000636847.1
CDS GCA 72 bp GGGCCGCTACTCTGTGGCTGCCTGTCGGGGGAGAGCTaGTGGCGGAGTTGCTCCAGTTCCCGCTCATACATG +
Preference number: 6 (lower is better)
Translates to: GPLLCGCLSGES*WRSCSSSRSYM
Trigger: CATGTATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCTCTCCCCCGACAGGCAGCCACAGAGTAGCGGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000503342.1
ENST00000636847.1
CDS CAA 72 bp CTGTGGCTGCCTGTCGGGGGAGAGCTGCTGGCGGAGTaGCTCCAGTTCCCGCTCATACATGAGCCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: LWLPVGGELLAE*LQFPLIHEPLL
Trigger: GAGCAGCGGCTCATGTATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCTCTCCCCCGACAGGCAGCCACAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000503342.1
ENST00000636847.1
CDS TCA 72 bp GAAGGTCACTGTGTACTGGGCATCCTTGGACTGTGGTaGAGGCACCTCGGGGTCCACCACCGGGGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: EGHCVLGILGLW*RHLGVHHRGSH
Trigger: GTGGCTGCCCCGGTGGTGGACCCCGAGGTGCCTTCACCACAGTCCAAGGATGCCCAGTACACAGTGACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS GCA 72 bp GTGGGATCCAGTCGGCAGGTGCCCCAGGAATCCCACTaGCTGGGGCTGGCACCAGCACAGCATTCCTTTCCT +
Preference number: 6 (lower is better)
Translates to: VGSSRQVPQESH*LGLAPAQHSFP
Trigger: AGGAAAGGAATGCTGTGCTGGTGCCAGCCCCAGGCAGTGGGATTCCTGGGGCACCTGCCGACTGGATCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000506044.1
ENST00000636847.1
CDS CCA 72 bp CCGCTACTCTGTGGCTGCCTGTCGGGGGAGAGCTGCTaGCGGAGTTGCTCCAGTTCCCGCTCATACATGAGC +
Preference number: 6 (lower is better)
Translates to: PLLCGCLSGESC*RSCSSSRSYMS
Trigger: GCTCATGTATGAGCGGGAACTGGAGCAACTCCGCCAGCAGCTCTCCCCCGACAGGCAGCCACAGAGTAGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000503342.1
ENST00000636847.1
CDS CCA 72 bp GATCCAGTCGGCAGGTGCCCCAGGAATCCCACTGCCTaGGGCTGGCACCAGCACAGCATTCCTTTCCTCAGT +
Preference number: 6 (lower is better)
Translates to: DPVGRCPRNPTA*GWHQHSIPFLS
Trigger: ACTGAGGAAAGGAATGCTGTGCTGGTGCCAGCCCCAGGCAGTGGGATTCCTGGGGCACCTGCCGACTGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000506044.1
ENST00000636847.1
CDS GCA 72 bp GCCATGCTCCTTGGGCAGGATGGAGTTCACGCCGGATaGATGGGGGCCAACAAGCTGCTCATTGGCACTGAG +
Preference number: 6 (lower is better)
Translates to: AMLLGQDGVHAG*MGANKLLIGTE
Trigger: CTCAGTGCCAATGAGCAGCTTGTTGGCCCCCATGCATCCGGCGTGAACTCCATCCTGCCCAAGGAGCATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000506044.1
ENST00000636847.1
CDS GCA 72 bp GAGGCTCCTCCGAATGTGCCGGGCTTTGGTGGAAAGTaGTTCTTTGACTGTGACGGCCTGCCGGAGCCGTTC +
Preference number: 6 (lower is better)
Translates to: EAPPNVPGFGGK*FFDCDGLPEPF
Trigger: GAACGGCTCCGGCAGGCCGTCACAGTCAAAGAAGCACTTTCCACCAAAGCCCGGCACATTCGGAGGAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS CCA 72 bp TCTGGAACAGCTCCTGTAACACGCATCACTTCCACGTaGAGACGCCCTGCAACCTCCCCCTGCTGGCTGATG +
Preference number: 6 (lower is better)
Translates to: SGTAPVTRITST*RRPATSPCWLM
Trigger: CATCAGCCAGCAGGGGGAGGTTGCAGGGCGTCTCCACGTGGAAGTGATGCGTGTTACAGGAGCTGTTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 72 bp TACAGTGGGAGAAGGTCACTGTGTACTGGGCATCCTTaGACTGTGGTGAAGGCACCTCGGGGTCCACCACCG +
Preference number: 6 (lower is better)
Translates to: YSGRRSLCTGHP*TVVKAPRGPPP
Trigger: CGGTGGTGGACCCCGAGGTGCCTTCACCACAGTCCAAGGATGCCCAGTACACAGTGACCTTCTCCCACTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 72 bp TGCTCCTTGGGCAGGATGGAGTTCACGCCGGATGCATaGGGGCCAACAAGCTGCTCATTGGCACTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: CSLGRMEFTPDA*GPTSCSLALRS
Trigger: TGACCTCAGTGCCAATGAGCAGCTTGTTGGCCCCCATGCATCCGGCGTGAACTCCATCCTGCCCAAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000506044.1
ENST00000636847.1
CDS TCA 72 bp GGTGTGGAGTGCTCGGTGGAGTCTGCATCCTTCGTCTaGATGGCCAGCTGGTCTGAGCTGTCACTAGAAGGG +
Preference number: 6 (lower is better)
Translates to: GVECSVESASFV*MASWSELSLEG
Trigger: CCCTTCTAGTGACAGCTCAGACCAGCTGGCCATTCAGACGAAGGATGCAGACTCCACCGAGCACTCCACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS GCA 72 bp GCTGGCTGGGGTGGTGGAGCCCATCGGAGACAGTCTTaGCGCCTGTTTTATTTGGTAGACTCCTCCTACTGG +
Preference number: 6 (lower is better)
Translates to: AGWGGGAHRRQS*RLFYLVDSSYW
Trigger: CCAGTAGGAGGAGTCTACCAAATAAAACAGGCGGCAAGACTGTCTCCGATGGGCTCCACCACCCCAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS GCA 72 bp GAGGTTGTGCCTCCCTGGTCATTCTCTAACTTGGAATaGAGCTGGCTGGGGTGGTGGAGCCCATCGGAGACA +
Preference number: 6 (lower is better)
Translates to: EVVPPWSFSNLE*SWLGWWSPSET
Trigger: TGTCTCCGATGGGCTCCACCACCCCAGCCAGCTGCATTCCAAGTTAGAGAATGACCAGGGAGGCACAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS CCA 72 bp TTCCCCATAGGATTCGGTCACCATGCCACAGCTGGGTaGTACTGCACACAAGGGTGCCGTTCACACAGGACC +
Preference number: 6 (lower is better)
Translates to: FPIGFGHHATAG*YCTQGCRSHRT
Trigger: GGTCCTGTGTGAACGGCACCCTTGTGTGCAGTACCACCCAGCTGTGGCATGGTGACCGAATCCTATGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 72 bp GTGCCTCCCTGGTCATTCTCTAACTTGGAATGCAGCTaGCTGGGGTGGTGGAGCCCATCGGAGACAGTCTTG +
Preference number: 6 (lower is better)
Translates to: VPPWSFSNLECS*LGWWSPSETVL
Trigger: CAAGACTGTCTCCGATGGGCTCCACCACCCCAGCCAGCTGCATTCCAAGTTAGAGAATGACCAGGGAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378814.9
ENST00000502297.5
CDS CAA 72 bp TTACAGTGGGAGAAGGTCACTGTGTACTGGGCATCCTaGGACTGTGGTGAAGGCACCTCGGGGTCCACCACC +
Preference number: 6 (lower is better)
Translates to: LQWEKVTVYWAS*DCGEGTSGSTT
Trigger: GGTGGTGGACCCCGAGGTGCCTTCACCACAGTCCAAGGATGCCCAGTACACAGTGACCTTCTCCCACTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CAA 72 bp CTCCGAATGTGCCGGGCTTTGGTGGAAAGTGCTTCTTaGACTGTGACGGCCTGCCGGAGCCGTTCAAGACTC +
Preference number: 6 (lower is better)
Translates to: LRMCRALVESAS*TVTACRSRSRL
Trigger: GAGTCTTGAACGGCTCCGGCAGGCCGTCACAGTCAAAGAAGCACTTTCCACCAAAGCCCGGCACATTCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS CCA 72 bp ACCTCCCAGATGGAGCTGCCATTTCCAGCACACCGGTaGCCCCATACTTCAATGGCCAGTGCTCCATCTGAA +
Preference number: 6 (lower is better)
Translates to: TSQMELPFPAHR*PHTSMASAPSE
Trigger: TTCAGATGGAGCACTGGCCATTGAAGTATGGGGCCACCGGTGTGCTGGAAATGGCAGCTCCATCTGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000506044.1
ENST00000636847.1
CDS CCA 72 bp TGGTCATTCTCTAACTTGGAATGCAGCTGGCTGGGGTaGTGGAGCCCATCGGAGACAGTCTTGCCGCCTGTT +
Preference number: 6 (lower is better)
Translates to: WSFSNLECSWLG*WSPSETVLPPV
Trigger: AACAGGCGGCAAGACTGTCTCCGATGGGCTCCACCACCCCAGCCAGCTGCATTCCAAGTTAGAGAATGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS CAA 72 bp AGCTGGCTGGGGTGGTGGAGCCCATCGGAGACAGTCTaGCCGCCTGTTTTATTTGGTAGACTCCTCCTACTG +
Preference number: 6 (lower is better)
Translates to: SWLGWWSPSETV*PPVLFGRLLLL
Trigger: CAGTAGGAGGAGTCTACCAAATAAAACAGGCGGCAAGACTGTCTCCGATGGGCTCCACCACCCCAGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS TCA 72 bp GGAGTCTGCATCCTTCGTCTGAATGGCCAGCTGGTCTaGGCTGTCACTAGAAGGGACCACCATGTCAGACAG +
Preference number: 6 (lower is better)
Translates to: GVCILRLNGQLV*AVTRRDHHVRQ
Trigger: CTGTCTGACATGGTGGTCCCTTCTAGTGACAGCTCAGACCAGCTGGCCATTCAGACGAAGGATGCAGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS GCA 72 bp ATAGGATTCGGTCACCATGCCACAGCTGGGTGGTACTaGACACAAGGGTGCCGTTCACACAGGACCTTGCAT +
Preference number: 6 (lower is better)
Translates to: IGFGHHATAGWY*TQGCRSHRTLH
Trigger: ATGCAAGGTCCTGTGTGAACGGCACCCTTGTGTGCAGTACCACCCAGCTGTGGCATGGTGACCGAATCCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS GCA 72 bp ATGGAGTTCACGCCGGATGCATGGGGGCCAACAAGCTaGTCATTGGCACTGAGGTCATCCGCATTCAAATCG +
Preference number: 6 (lower is better)
Translates to: MEFTPDAWGPTS*SLALRSSAFKS
Trigger: CGATTTGAATGCGGATGACCTCAGTGCCAATGAGCAGCTTGTTGGCCCCCATGCATCCGGCGTGAACTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000506044.1
ENST00000636847.1
CDS CAA 72 bp TTCACGCCGGATGCATGGGGGCCAACAAGCTGCTCATaGGCACTGAGGTCATCCGCATTCAAATCGAGGAAG +
Preference number: 6 (lower is better)
Translates to: FTPDAWGPTSCS*ALRSSAFKSRK
Trigger: CTTCCTCGATTTGAATGCGGATGACCTCAGTGCCAATGAGCAGCTTGTTGGCCCCCATGCATCCGGCGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000506044.1
ENST00000636847.1
CDS CAA 90 bp TCTCAATGTACGTCTCCCCATCTGATGTGCCTTCGTTTTCACTCCTaGCTGCCAGGAGAGCCAGCGTTTCCCGGTCCTCTATCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: SQCTSPHLMCLRFHS*LPGEPAFPGPLSPQ
Trigger: CTGAGGAGATAGAGGACCGGGAAACGCTGGCTCTCCTGGCAGCAAGGAGTGAAAACGAAGGCACATCAGATGGGGAGACGTACATTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS TCA 72 bp CGGATGCATGGGGGCCAACAAGCTGCTCATTGGCACTaGGGTCATCCGCATTCAAATCGAGGAAGAGAACTG +
Preference number: 6 (lower is better)
Translates to: RMHGGQQAAHWH*GHPHSNRGREL
Trigger: CAGTTCTCTTCCTCGATTTGAATGCGGATGACCTCAGTGCCAATGAGCAGCTTGTTGGCCCCCATGCATCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000506044.1
ENST00000636847.1
CDS GCA 72 bp CACCATGCCACAGCTGGGTGGTACTGCACACAAGGGTaGCGTTCACACAGGACCTTGCATTTTCTTTTGGAG +
Preference number: 6 (lower is better)
Translates to: HHATAGWYCTQG*RSHRTLHFLLE
Trigger: CTCCAAAAGAAAATGCAAGGTCCTGTGTGAACGGCACCCTTGTGTGCAGTACCACCCAGCTGTGGCATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS GCA 72 bp GGTTCAGAGGAAGCCTCACTGGCTGCATCCAGGTCATaGTCTGGCGGGCCCGTTTCTTTTTCAAAGTCTTTC +
Preference number: 6 (lower is better)
Translates to: GSEEASLAASRS*SGGPVSFSKSF
Trigger: GAAAGACTTTGAAAAAGAAACGGGCCCGCCAGAGCATGACCTGGATGCAGCCAGTGAGGCTTCCTCTGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 72 bp TTATTTCCCCATAGGATTCGGTCACCATGCCACAGCTaGGTGGTACTGCACACAAGGGTGCCGTTCACACAG +
Preference number: 6 (lower is better)
Translates to: LFPHRIRSPCHS*VVLHTRVPFTQ
Trigger: CTGTGTGAACGGCACCCTTGTGTGCAGTACCACCCAGCTGTGGCATGGTGACCGAATCCTATGGGGAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 72 bp GGAATTCTCCGAAGAGTCATCCTCCACCACACGCTCTaGAACAGCTCCTGTAACACGCATCACTTCCACGTG +
Preference number: 6 (lower is better)
Translates to: GILRRVILHHTL*NSSCNTHHFHV
Trigger: CACGTGGAAGTGATGCGTGTTACAGGAGCTGTTCCAGAGCGTGTGGTGGAGGATGACTCTTCGGAGAATTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 72 bp CGCTGCTGTCTACGACTTCAAGGCTCCCACTTTCACTaGAATTCTCCGAAGAGTCATCCTCCACCACACGCT +
Preference number: 6 (lower is better)
Translates to: RCCLRLQGSHFH*NSPKSHPPPHA
Trigger: AGCGTGTGGTGGAGGATGACTCTTCGGAGAATTCCAGTGAAAGTGGGAGCCTTGAAGTCGTAGACAGCAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 72 bp GGTAACTGTCCAGCCCTCTTTGGAGTTTGGTGGACCTaGCAGTTACACAGCCGATGGATACTGACAGGATGG +
Preference number: 6 (lower is better)
Translates to: GNCPALFGVWWT*QLHSRWILTGW
Trigger: CCATCCTGTCAGTATCCATCGGCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000514714.1
ENST00000636847.1
CDS TCA 72 bp TTTGGTGGACCTGGCAGTTACACAGCCGATGGATACTaGCAGGATGGCTTCAACCATAAGTGGCAGTGTCCC +
Preference number: 6 (lower is better)
Translates to: FGGPGSYTADGY*QDGFNHKWQCP
Trigger: GGGACACTGCCACTTATGGTTGAAGCCATCCTGTCAGTATCCATCGGCTGTGTAACTGCCAGGTCCACCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000514714.1
ENST00000636847.1
CDS TCA 72 bp GCCTCGAGTGTACTTCTCAATGTACGTCTCCCCATCTaGTGTGCCTTCGTTTTCACTCCTTGCTGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: ASSVLLNVRLPI*CAFVFTPCCQE
Trigger: CTCCTGGCAGCAAGGAGTGAAAACGAAGGCACATCAGATGGGGAGACGTACATTGAGAAGTACACTCGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS GCA 72 bp ATAGTTATAGTCTGGTTCAGAGGAAGCCTCACTGGCTaGATCCAGGTCATGCTCTGGCGGGCCCGTTTCTTT +
Preference number: 6 (lower is better)
Translates to: IVIVWFRGSLTG*IQVMLWRARFF
Trigger: AAAGAAACGGGCCCGCCAGAGCATGACCTGGATGCAGCCAGTGAGGCTTCCTCTGAACCAGACTATAACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS GCA 72 bp CGGAGTTGCTCCAGTTCCCGCTCATACATGAGCCGCTaGTCCTCTAGGGCACTTCTCTTTTCTTCTAGGTAT +
Preference number: 6 (lower is better)
Translates to: RSCSSSRSYMSR*SSRALLFSSRY
Trigger: ATACCTAGAAGAAAAGAGAAGTGCCCTAGAGGAGCAGCGGCTCATGTATGAGCGGGAACTGGAGCAACTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS GCA 72 bp CCCTGCAACCTCCCCCTGCTGGCTGATGATAGGGACTaGATACTGAAGTTTCACATCACAGAAGAGGCATTC +
Preference number: 6 (lower is better)
Translates to: PCNLPLLADDRD*ILKFHITEEAF
Trigger: GAATGCCTCTTCTGTGATGTGAAACTTCAGTATGCAGTCCCTATCATCAGCCAGCAGGGGGAGGTTGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS GCA 72 bp TGCCGGAGCCGTTCAAGACTCAGAATGTTTTCCACCTaGAGCACGCCTCGAGTGTACTTCTCAATGTACGTC +
Preference number: 6 (lower is better)
Translates to: CRSRSRLRMFST*STPRVYFSMYV
Trigger: GACGTACATTGAGAAGTACACTCGAGGCGTGCTGCAGGTGGAAAACATTCTGAGTCTTGAACGGCTCCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS GCA 72 bp CAGTCCTGCACAGTGATTTGGAGTTTTTCTCAGGGATaGTCTGGGATGATGGGCTCCCTTTGGCTAAGGCAC +
Preference number: 6 (lower is better)
Translates to: QSCTVIWSFSQG*SGMMGSLWLRH
Trigger: GTGCCTTAGCCAAAGGGAGCCCATCATCCCAGAGCATCCCTGAGAAAAACTCCAAATCACTGTGCAGGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS CCA 72 bp AGAGGAAGCCTCACTGGCTGCATCCAGGTCATGCTCTaGCGGGCCCGTTTCTTTTTCAAAGTCTTTCAACCA +
Preference number: 6 (lower is better)
Translates to: RGSLTGCIQVML*RARFFFKVFQP
Trigger: TGGTTGAAAGACTTTGAAAAAGAAACGGGCCCGCCAGAGCATGACCTGGATGCAGCCAGTGAGGCTTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 72 bp ATTCATAGTTATAGTCTGGTTCAGAGGAAGCCTCACTaGCTGCATCCAGGTCATGCTCTGGCGGGCCCGTTT +
Preference number: 6 (lower is better)
Translates to: IHSYSLVQRKPH*LHPGHALAGPF
Trigger: AAACGGGCCCGCCAGAGCATGACCTGGATGCAGCCAGTGAGGCTTCCTCTGAACCAGACTATAACTATGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 72 bp CTCTCTGGTAACTGTCCAGCCCTCTTTGGAGTTTGGTaGACCTGGCAGTTACACAGCCGATGGATACTGACA +
Preference number: 6 (lower is better)
Translates to: LSGNCPALFGVW*TWQLHSRWILT
Trigger: TGTCAGTATCCATCGGCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGTTACCAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378826.6
ENST00000636847.1
CDS CCA 72 bp AAGGTCCGGTCGGCTGGAAGAGACATTATGAACATTTaGTGTACTGAGGCTCCTCCGAATGTGCCGGGCTTT +
Preference number: 6 (lower is better)
Translates to: KVRSAGRDIMNI*CTEAPPNVPGF
Trigger: AAAGCCCGGCACATTCGGAGGAGCCTCAGTACACCAAATGTTCATAATGTCTCTTCCAGCCGACCGGACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS CCA 72 bp CTTCCTGGTAACTGTCCAGCCCTCTTTGGAGTTTGGTaGACCTGGCAGTTACACAGCCGATGGATACTGACA +
Preference number: 6 (lower is better)
Translates to: LPGNCPALFGVW*TWQLHSRWILT
Trigger: TGTCAGTATCCATCGGCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGTTACCAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378814.9
ENST00000378843.6
ENST00000502297.5
ENST00000514714.1
CDS CAA 72 bp AGCTTTAACCAGCTGCTCTCGCAGTTTTGCCAGGCTTaGTCGGAAGAGTTCATCCCTCTCTTCTGCCCACTG +
Preference number: 6 (lower is better)
Translates to: SFNQLLSQFCQA*SEEFIPLFCPL
Trigger: CAGTGGGCAGAAGAGAGGGATGAACTCTTCCGACAAAGCCTGGCAAAACTGCGAGAGCAGCTGGTTAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS TCA 72 bp GTCGGCTGGAAGAGACATTATGAACATTTGGTGTACTaGGGCTCCTCCGAATGTGCCGGGCTTTGGTGGAAA +
Preference number: 6 (lower is better)
Translates to: VGWKRHYEHLVY*GSSECAGLWWK
Trigger: TTTCCACCAAAGCCCGGCACATTCGGAGGAGCCTCAGTACACCAAATGTTCATAATGTCTCTTCCAGCCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS GCA 72 bp AGGATGGCTTCAACCATAAGTGGCAGTGTCCCTGAATaGTGCACAGGTTTCACCGTGACTTGTACTCTACGG +
Preference number: 6 (lower is better)
Translates to: RMASTISGSVPE*CTGFTVTCTLR
Trigger: CCGTAGAGTACAAGTCACGGTGAAACCTGTGCAGCATTCAGGGACACTGCCACTTATGGTTGAAGCCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000514714.1
ENST00000636847.1
CDS GCA 72 bp GAGTGTACTTCTCAATGTACGTCTCCCCATCTGATGTaGCTTCGTTTTCACTCCTTGCTGCCAGGAGAGCCA +
Preference number: 6 (lower is better)
Translates to: ECTSQCTSPHLM*LRFHSLLPGEP
Trigger: TGGCTCTCCTGGCAGCAAGGAGTGAAAACGAAGGCACATCAGATGGGGAGACGTACATTGAGAAGTACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS GCA 72 bp TCTGTCAACTCTTTGTTTGAGGACGGCCTGAAATCATaGACAAGCGATGGTGTGGAGTGCTCGGTGGAGTCT +
Preference number: 6 (lower is better)
Translates to: SVNSLFEDGLKS*TSDGVECSVES
Trigger: AGACTCCACCGAGCACTCCACACCATCGCTTGTGCATGATTTCAGGCCGTCCTCAAACAAAGAGTTGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS GCA 72 bp TCTGGAATTATTACCTGGTCATTCTCTAACTTGGAATaGAGCTGGCTGGGGTGGTGGAGCCCATCGGAGACA +
Preference number: 6 (lower is better)
Translates to: SGIITWSFSNLE*SWLGWWSPSET
Trigger: TGTCTCCGATGGGCTCCACCACCCCAGCCAGCTGCATTCCAAGTTAGAGAATGACCAGGTAATAATTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 72 bp TCATCCGCATTCAAATCGAGGAAGAGAACTGGTATGTaGGTTTCCATTCCAGGAGGTGGGATCCAGTCGGCA +
Preference number: 6 (lower is better)
Translates to: SSAFKSRKRTGM*VSIPGGGIQSA
Trigger: TGCCGACTGGATCCCACCTCCTGGAATGGAAACCCACATACCAGTTCTCTTCCTCGATTTGAATGCGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000506044.1
ENST00000636847.1
CDS CCA 72 bp ATTATTACCTGGTCATTCTCTAACTTGGAATGCAGCTaGCTGGGGTGGTGGAGCCCATCGGAGACAGTCTTG +
Preference number: 6 (lower is better)
Translates to: IITWSFSNLECS*LGWWSPSETVL
Trigger: CAAGACTGTCTCCGATGGGCTCCACCACCCCAGCCAGCTGCATTCCAAGTTAGAGAATGACCAGGTAATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259711.11
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CAA 72 bp GGCACTGAGGTTTGCAGCAGGGATCTGAAGAGTCACTaGGTAATCGGTGAGTTTGCTCATTTCCTCAGCCAG +
Preference number: 6 (lower is better)
Translates to: GTEVCSRDLKSH*VIGEFAHFLSQ
Trigger: CTGGCTGAGGAAATGAGCAAACTCACCGATTACCAAGTGACTCTTCAGATCCCTGCTGCAAACCTCAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CAA 72 bp ATCCTCATCATCTCTCTGGTAACTGTCCAGCCCTCTTaGGAGTTTGGTGGACCTGGCAGTTACACAGCCGAT +
Preference number: 6 (lower is better)
Translates to: ILIISLVTVQPS*EFGGPGSYTAD
Trigger: ATCGGCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGTTACCAGAGAGATGATGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378826.6
ENST00000636847.1
CDS TCA 72 bp AGGAAAGAGGATCTTCAAATAAGACCACCAAGGGGATaGCCACCAGGCAGACAGGCTTATTATCGGGAAGCC +
Preference number: 6 (lower is better)
Translates to: RKEDLQIRPPRG*PPGRQAYYREA
Trigger: GGCTTCCCGATAATAAGCCTGTCTGCCTGGTGGTCATCCCCTTGGTGGTCTTATTTGAAGATCCTCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636847.1
CDS GCA 72 bp ATGGCTTCAACCATAAGTGGCAGTGTCCCTGAATGCTaGACAGGTTTCACCGTGACTTGTACTCTACGGGAA +
Preference number: 6 (lower is better)
Translates to: MASTISGSVPEC*TGFTVTCTLRE
Trigger: TTCCCGTAGAGTACAAGTCACGGTGAAACCTGTGCAGCATTCAGGGACACTGCCACTTATGGTTGAAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000514714.1
ENST00000636847.1
CDS GCA 72 bp TGGGGCAGGCATCTAGTTCTGAACATGAGCCAGTCCTaGACAGTGATTTGGAGTTTTTCTCAGGGATGCTCT +
Preference number: 6 (lower is better)
Translates to: WGRHLVLNMSQS*TVIWSFSQGCS
Trigger: AGAGCATCCCTGAGAAAAACTCCAAATCACTGTGCAGGACTGGCTCATGTTCAGAACTAGATGCCTGCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS CCA 72 bp TCACAATCCTTTTGGCTCGGTCTGCATATCTTAATGTaGAGAGGGTCTCTTCATAGTTGTCTGCGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: SQSFWLGLHILM*RGSLHSCLRLG
Trigger: GCCCAGCCGCAGACAACTATGAAGAGACCCTCTCCACATTAAGATATGCAGACCGAGCCAAAAGGATTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 72 bp ACTGAGGTCATCCGCATTCAAATCGAGGAAGAGAACTaGTATGTGGGTTTCCATTCCAGGAGGTGGGATCCA +
Preference number: 6 (lower is better)
Translates to: TEVIRIQIEEEN*YVGFHSRRWDP
Trigger: TGGATCCCACCTCCTGGAATGGAAACCCACATACCAGTTCTCTTCCTCGATTTGAATGCGGATGACCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000506044.1
ENST00000636847.1
CDS CAA 72 bp AACACAGCATGGGAGCGGCTGCTTTCTTCGTTCATGTaGGTAGCAGCTACCGTTCGAGACTTATTTCCCTCA +
Preference number: 6 (lower is better)
Translates to: NTAWERLLSSFM*VAATVRDLFPS
Trigger: TGAGGGAAATAAGTCTCGAACGGTAGCTGCTACCAACATGAACGAAGAAAGCAGCCGCTCCCATGCTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CAA 90 bp CTTCCTATTGGCACTGAGGTTTGCAGCAGGGATCTGAAGAGTCACTaGGTAATCGGTGAGTTTGCTCATTTCCTCAGCCAGGAAGTTTGC +
Preference number: 6 (lower is better)
Translates to: LPIGTEVCSRDLKSH*VIGEFAHFLSQEVC
Trigger: GCAAACTTCCTGGCTGAGGAAATGAGCAAACTCACCGATTACCAAGTGACTCTTCAGATCCCTGCTGCAAACCTCAGTGCCAATAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS TCA 72 bp GTTCACTCACTATTGCACCTCTCTTCCTATTGGCACTaGGGTTTGCAGCAGGGATCTGAAGAGTCACTTGGT +
Preference number: 6 (lower is better)
Translates to: VHSLLHLSSYWH*GLQQGSEESLG
Trigger: ACCAAGTGACTCTTCAGATCCCTGCTGCAAACCTCAGTGCCAATAGGAAGAGAGGTGCAATAGTGAGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS GCA 72 bp CAAGGTATTAGCTTTAACCAGCTGCTCTCGCAGTTTTaGCAGGCTTTGTCGGAAGAGTTCATCCCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: QGISFNQLLSQF*QALSEEFIPLF
Trigger: GAAGAGAGGGATGAACTCTTCCGACAAAGCCTGGCAAAACTGCGAGAGCAGCTGGTTAAAGCTAATACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS GCA 72 bp TTTGCTTCCCTCACCAAGGTATTAGCTTTAACCAGCTaGTCTCGCAGTTTTGCCAGGCTTTGTCGGAAGAGT +
Preference number: 6 (lower is better)
Translates to: FASLTKVLALTS*SRSFARLCRKS
Trigger: ACTCTTCCGACAAAGCCTGGCAAAACTGCGAGAGCAGCTGGTTAAAGCTAATACCTTGGTGAGGGAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS GCA 72 bp CACTATTGCACCTCTCTTCCTATTGGCACTGAGGTTTaGAGCAGGGATCTGAAGAGTCACTTGGTAATCGGT +
Preference number: 6 (lower is better)
Translates to: HYCTSLPIGTEV*SRDLKSHLVIG
Trigger: ACCGATTACCAAGTGACTCTTCAGATCCCTGCTGCAAACCTCAGTGCCAATAGGAAGAGAGGTGCAATAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CCA 72 bp AAGGGTGCCGTTCACACAGGACCTTGCATTTTCTTTTaGAGTGAGAGTGACGTCTCCATCAGATGCAATGTC +
Preference number: 6 (lower is better)
Translates to: KGAVHTGPCIFF*SESDVSIRCNV
Trigger: GACATTGCATCTGATGGAGACGTCACTCTCACTCCAAAAGAAAATGCAAGGTCCTGTGTGAACGGCACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CAA 72 bp CTGAGGCTGAATTCCTATGCCAAAAAGCTGGATATCTaGAGAGGTATCTGCACCCACCCTGGTGTGATCCTT +
Preference number: 6 (lower is better)
Translates to: LRLNSYAKKLDI*RGICTHPGVIL
Trigger: AAGGATCACACCAGGGTGGGTGCAGATACCTCTCAAGATATCCAGCTTTTTGGCATAGGAATTCAGCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CAA 90 bp ATGCTCTGGGATGATGGGCTCCCTTTGGCTAAGGCACTGTTTTCCTaGAGTGGCACCACAATTATCTTGTCCTTTACCAAGCCTTTTTCG +
Preference number: 6 (lower is better)
Translates to: MLWDDGLPLAKALFS*SGTTIILSFTKPFS
Trigger: CGAAAAAGGCTTGGTAAAGGACAAGATAATTGTGGTGCCACTCAAGGAAAACAGTGCCTTAGCCAAAGGGAGCCCATCATCCCAGAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS TCA 72 bp TTGCAGCAGGGATCTGAAGAGTCACTTGGTAATCGGTaGGTTTGCTCATTTCCTCAGCCAGGAAGTTTGCTT +
Preference number: 6 (lower is better)
Translates to: LQQGSEESLGNR*VCSFPQPGSLL
Trigger: AAGCAAACTTCCTGGCTGAGGAAATGAGCAAACTCACCGATTACCAAGTGACTCTTCAGATCCCTGCTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS TCA 72 bp ACCATTCCCTGTTCTCCAAGCTGGCATTGTAAACACTaGAGTCAGCAAACTCCACAGGTACATAAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: TIPCSPSWHCKH*SQQTPQVHKAV
Trigger: CACAGCCTTATGTACCTGTGGAGTTTGCTGACTTCAGTGTTTACAATGCCAGCTTGGAGAACAGGGAATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS TCA 72 bp GTGTCTGTTGTTCCCCTTTCTGTCCATCGGTTCCCATaGTTTAGCTCTCACTTATTAGTGAGAACACGCGGT +
Preference number: 6 (lower is better)
Translates to: VSVVPLSVHRFP*FSSHLLVRTRG
Trigger: ACCGCGTGTTCTCACTAATAAGTGAGAGCTAAATCATGGGAACCGATGGACAGAAAGGGGAACAACAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503342.1
CDS TCA 72 bp CCCAGTGTTTGTGGAGGAGCTTCGTCTGAAACCACATaGGAGGAAAGAGGATCTTCAAATAAGACCACCAAG +
Preference number: 6 (lower is better)
Translates to: PSVCGGASSETT*EERGSSNKTTK
Trigger: CTTGGTGGTCTTATTTGAAGATCCTCTTTCCTCTCATGTGGTTTCAGACGAAGCTCCTCCACAAACACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636847.1
CDS GCA 72 bp ATCGGTGAGTTTGCTCATTTCCTCAGCCAGGAAGTTTaGTTCCCTCACCAAGGTATTAGCTTTAACCAGCTG +
Preference number: 6 (lower is better)
Translates to: IGEFAHFLSQEV*FPHQGISFNQL
Trigger: CAGCTGGTTAAAGCTAATACCTTGGTGAGGGAAGCAAACTTCCTGGCTGAGGAAATGAGCAAACTCACCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS GCA 72 bp TCTAAGAATGATGGCCGCCAGTTCCATCCATGTTCCTaGAAAGGACACGATCTTGTTGTTTTTCATGGCTGC +
Preference number: 6 (lower is better)
Translates to: SKNDGRQFHPCS*KGHDLVVFHGC
Trigger: GCAGCCATGAAAAACAACAAGATCGTGTCCTTTGCAGGAACATGGATGGAACTGGCGGCCATCATTCTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503342.1
CDS CCA 72 bp TTCTGCATAGTACAGACAAGTCAAGCATTTACCTCCTaGCTTAGAAGAGGCCTTGCTTCCAGGGCTATCCTT +
Preference number: 6 (lower is better)
Translates to: FCIVQTSQAFTS*LRRGLASRAIL
Trigger: AAGGATAGCCCTGGAAGCAAGGCCTCTTCTAAGCCAGGAGGTAAATGCTTGACTTGTCTGTACTATGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS CAA 72 bp TCCTCCTCAGAGTCAATCTTCTTCTCACGTTTGCTATaGTGTTCTACTGGCATGCTGCTGCCATTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: SSSESIFFSRLL*CSTGMLLPLLP
Trigger: AGGAAGCAATGGCAGCAGCATGCCAGTAGAACACAATAGCAAACGTGAGAAGAAGATTGACTCTGAGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259711.11
ENST00000502297.5
ENST00000636847.1
CDS TCA 72 bp TACCAAGCCTTTTTCGACTTCTGTCAACTCTTTGTTTaGGGACGGCCTGAAATCATGCACAAGCGATGGTGT +
Preference number: 6 (lower is better)
Translates to: YQAFFDFCQLFV*GRPEIMHKRWC
Trigger: ACACCATCGCTTGTGCATGATTTCAGGCCGTCCTCAAACAAAGAGTTGACAGAAGTCGAAAAAGGCTTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS CAA 90 bp ATTATCTTGTCCTTTACCAAGCCTTTTTCGACTTCTGTCAACTCTTaGTTTGAGGACGGCCTGAAATCATGCACAAGCGATGGTGTGGAG +
Preference number: 6 (lower is better)
Translates to: IILSFTKPFSTSVNS*FEDGLKSCTSDGVE
Trigger: CTCCACACCATCGCTTGTGCATGATTTCAGGCCGTCCTCAAACAAAGAGTTGACAGAAGTCGAAAAAGGCTTGGTAAAGGACAAGATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS TCA 72 bp GGCCCCATACTTCAATGGCCAGTGCTCCATCTGAAATaGACTCCAGAAATTCTTCTGTTACATTCACCACAT +
Preference number: 6 (lower is better)
Translates to: GPILQWPVLHLK*TPEILLLHSPH
Trigger: ATGTGGTGAATGTAACAGAAGAATTTCTGGAGTTCATTTCAGATGGAGCACTGGCCATTGAAGTATGGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS GCA 72 bp ATTTTCTTTTGGAGTGAGAGTGACGTCTCCATCAGATaGAATGTCAATCTCACAGTGCTGAGGCTGAATTCC +
Preference number: 6 (lower is better)
Translates to: IFFWSESDVSIR*NVNLTVLRLNS
Trigger: GGAATTCAGCCTCAGCACTGTGAGATTGACATTGCATCTGATGGAGACGTCACTCTCACTCCAAAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000636847.1
CDS CAA 72 bp TCCTTTACCAAGCCTTTTTCGACTTCTGTCAACTCTTaGTTTGAGGACGGCCTGAAATCATGCACAAGCGAT +
Preference number: 6 (lower is better)
Translates to: SFTKPFSTSVNS*FEDGLKSCTSD
Trigger: ATCGCTTGTGCATGATTTCAGGCCGTCCTCAAACAAAGAGTTGACAGAAGTCGAAAAAGGCTTGGTAAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS CAA 72 bp CGTTTTCTTTATCCAGTCTATCGTTGGACATTTAGGTaGATTCCATGTCTTTCCTCTCTTCTGCCCACTGGG +
Preference number: 6 (lower is better)
Translates to: RFLYPVYRWTFR*IPCLSSLLPTG
Trigger: CCCAGTGGGCAGAAGAGAGGAAAGACATGGAATCAACCTAAATGTCCAACGATAGACTGGATAAAGAAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503342.1
CDS TCA 72 bp GGAGAGAATGCTTTAAAAGGGCTGACGGTTAAGGCATaGGGAGTCTCTGATGTACAACCTTCTTTATTCCTT +
Preference number: 6 (lower is better)
Translates to: GENALKGLTVKA*GVSDVQPSLFL
Trigger: AAGGAATAAAGAAGGTTGTACATCAGAGACTCCTCATGCCTTAACCGTCAGCCCTTTTAAAGCATTCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000259711.11
ENST00000358380.10
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1
CDS GCA 72 bp TTAATGCACACTGCTGCTTCACAGGTGACACAACTCTaGTCTATTCTGCATAGTACAGACAAGTCAAGCATT +
Preference number: 6 (lower is better)
Translates to: LMHTAASQVTQL*SILHSTDKSSI
Trigger: AATGCTTGACTTGTCTGTACTATGCAGAATAGAGCAGAGTTGTGTCACCTGTGAAGCAGCAGTGTGCATTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358380.10
CDS TCA 72 bp AGACTGAAATGTCCACATCTTGAGTATAGAGCTCGATaGGTTTTGAGAAATGCACATATGAGTGTAACCTGC +
Preference number: 6 (lower is better)
Translates to: RLKCPHLEYRAR*VLRNAHMSVTC
Trigger: GCAGGTTACACTCATATGTGCATTTCTCAAAACTCATCGAGCTCTATACTCAAGATGTGGACATTTCAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514714.1
CDS TCA 72 bp AGAAGAATCTGTCAAACCATCAAAATCTTTTCCCTCTaGCACTCCCATAAATTCTGTGAAAGAATGGTCTTC +
Preference number: 6 (lower is better)
Translates to: RRICQTIKIFSL*HSHKFCERMVF
Trigger: GAAGACCATTCTTTCACAGAATTTATGGGAGTGTCAGAGGGAAAAGATTTTGATGGTTTGACAGATTCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259711.11
ENST00000378814.9
ENST00000378826.6
ENST00000378843.6
ENST00000502297.5
ENST00000636847.1