RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF12 (Homo sapiens)

Ensembl gene IDs: ENSG00000136883

Ensembl transcript IDs: ENST00000374118.8, ENST00000468460.2, ENST00000473174.1, ENST00000498016.1, ENST00000639832.1, ENST00000640217.1, ENST00000640217.2, ENST00000640553.1, ENST00000643988.1

Found 335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGGGACACGCAGGCCACCATGAGGGTGACCCCGCGCCCTCCCAGTaGGTCTGCCAGCAACTTGGTGAGCTTGCTGTCCCGGAAAGGGAT +
Preference number: 1 (lower is better)
Translates to: GGHAGHHEGDPAPSQ*VCQQLGELAVPERD
Trigger: ATCCCTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTCACTGGGAGGGCGCGGGGTCACCCTCATGGTGGCCTGCGTGTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR CCA 90 bp CAGTGCATGGCAAGGGGGAGCTGGGGCCATCAAGCAGGGACACGGTaGGGTCAGGCCAGGACCCTGCTGGTGATGGTAGCAGGCAGAGAG +
Preference number: 1 (lower is better)
Translates to: QCMARGSWGHQAGTR*GQARTLLVMVAGRE
Trigger: CTCTCTGCCTGCTACCATCACCAGCAGGGTCCTGGCCTGACCCCACCGTGTCCCTGCTTGATGGCCCCAGCTCCCCCTTGCCATGCACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR GCA 90 bp AGGAGACGCCTCTCTAGTGCATGGACCTGCTGGGCCAGGATGCGCTaGTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTTT +
Preference number: 1 (lower is better)
Translates to: RRRLSSAWTCWARMR*SFWARSRLFCSWLF
Trigger: AAAGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATCCTGGCCCAGCAGGTCCATGCACTAGAGAGGCGTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR CCA 90 bp CAGTCCATTTGGTCCAGCTGGAACTGCAGGCGACGGTTCTCCTCCTaGAGCTGCAGCATCTCTGTCTCCAAACGCTGGGGCTGCTTTGCC +
Preference number: 1 (lower is better)
Translates to: QSIWSSWNCRRRFSS*SCSISVSKRWGCFA
Trigger: GGCAAAGCAGCCCCAGCGTTTGGAGACAGAGATGCTGCAGCTCCAGGAGGAGAACCGTCGCCTGCAGTTCCAGCTGGACCAAATGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR GCA 90 bp ATTTGGTCCAGCTGGAACTGCAGGCGACGGTTCTCCTCCTGGAGCTaGAGCATCTCTGTCTCCAAACGCTGGGGCTGCTTTGCCACAGGA +
Preference number: 1 (lower is better)
Translates to: IWSSWNCRRRFSSWS*SISVSKRWGCFATG
Trigger: TCCTGTGGCAAAGCAGCCCCAGCGTTTGGAGACAGAGATGCTGCAGCTCCAGGAGGAGAACCGTCGCCTGCAGTTCCAGCTGGACCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR CCA 90 bp CTCTCTAGTGCATGGACCTGCTGGGCCAGGATGCGCTGCTCATTCTaGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTTTTCTTTCCCT +
Preference number: 1 (lower is better)
Translates to: LSSAWTCWARMRCSF*ARSRLFCSWLFSFP
Trigger: AGGGAAAGAAAAGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATCCTGGCCCAGCAGGTCCATGCACTAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR CCA 90 bp CTGCAGCTGGCTCTTTTCTTTCCCTTGCAGTCCATTTGGTCCAGCTaGAACTGCAGGCGACGGTTCTCCTCCTGGAGCTGCAGCATCTCT +
Preference number: 1 (lower is better)
Translates to: LQLALFFPLQSIWSS*NCRRRFSSWSCSIS
Trigger: AGAGATGCTGCAGCTCCAGGAGGAGAACCGTCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAAAAGAGCCAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR CCA 90 bp GGAAGGCACTGGGCTGAGGGGGACACGCAGGCCACCATGAGGGTGACCCCGCGCAGGGTGAGCAGGGCATaGCTTCGGCTGGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: GRHWAEGDTQATMRVTPRRVSRA*LRLEAW
Trigger: CCAGGCCTCCAGCCGAAGCCATGCCCTGCTCACCCT...GCGCGGGGTCACCCTCATGGTGGCCTGCGTGTCCCCCTCAGCCCAGTGCCTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR CAA 90 bp GTGACCCCGCGCCCTCCCAGTGAGTCTGCCAGCAACTTGGTGAGCTaGCTGTCCCGGAAAGGGATGTGGCTCTGCTTCCGCTGTGGGTCC +
Preference number: 2 (lower is better)
Translates to: VTPRPPSESASNLVS*LSRKGMWLCFRCGS
Trigger: GGACCCACAGCGGAAGCAGAGCCACATCCCTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTCACTGGGAGGGCGCGGGGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR CAA 90 bp ACCATGAGGGTGACCCCGCGCCCTCCCAGTGAGTCTGCCAGCAACTaGGTGAGCTTGCTGTCCCGGAAAGGGATGTGGCTCTGCTTCCGC +
Preference number: 2 (lower is better)
Translates to: TMRVTPRPPSESASN*VSLLSRKGMWLCFR
Trigger: GCGGAAGCAGAGCCACATCCCTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTCACTGGGAGGGCGCGGGGTCACCCTCATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR GCA 90 bp ACCTGCTGGGCCAGGATGCGCTGCTCATTCTGGGCCAGGTCTCGGCTATTCTGCTGGTCCAGCTGGAACTaGAGGCGACGGTTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: TCWARMRCSFWARSRLFCWSSWN*RRRFSS
Trigger: GGAGGAGAACCGTCGCCTGCAGTTCCAGCTGGACCA...GCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATCCTGGCCCAGCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR GCA 90 bp CCAGGATGCGCTGCTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTCCGCTGAGCTCGGCTTaGATATCGCAGGGTGCTGAG +
Preference number: 2 (lower is better)
Translates to: PGCAAHSGPGLGYSAAGSPLSSA*ISQGAE
Trigger: CTCAGCACCCTGCGATATGCAAGCCGAGCTCAGCGG...AGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR TCA 90 bp GCTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTTTTCTTTCCCTTCCTGTGGTCGGGTGGTaGCCCGCTGAGCTCGGCTTG +
Preference number: 2 (lower is better)
Translates to: AHSGPGLGYSAAGSFLSLPVVGW*PAELGL
Trigger: CAAGCCGAGCTCAGCGGGTCACCACCCGACCACAGG...AAGGGAAAGAAAAGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR GCA 90 bp CCAGGATGCGCTGCTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTAAAGGGATGTGGCTCTaGTTCCGCTGTGGGTCCAGC +
Preference number: 2 (lower is better)
Translates to: PGCAAHSGPGLGYSAAGSKGMWL*FRCGSS
Trigger: GCTGGACCCACAGCGGAAGCAGAGCCACATCCCTTT...AGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR CCA 90 bp CTGGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTTTTCTTTCCCTTGCAGTCCGTCTCAGGAAGGCACTaGGCTGAGGGGGACACGCAG +
Preference number: 2 (lower is better)
Translates to: LGQVSAILQLALFFPLQSVSGRH*AEGDTQ
Trigger: CTGCGTGTCCCCCTCAGCCCAGTGCCTTCCTGAGAC...GGACTGCAAGGGAAAGAAAAGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR CCA 90 bp GGCTCTTTTCTTTCCCTTGCAGTCCATTTGGTCCAGCTGGAACTGCAGGCGACGAGACTTGGGGGCCTGTaGTCGGGTGGTGACCCGCTG +
Preference number: 2 (lower is better)
Translates to: GSFLSLAVHLVQLELQATRLGGL*SGGDPL
Trigger: CAGCGGGTCACCACCCGACCACAGGCCCCCAAGTCT...CGTCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAAAAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR TCA 90 bp CTGGCTCTTTTCTTTCCCTTGCAGTCCATTTGGTCCAGCTGGAACTGCAGGCGACCCGCGCCCTCCCAGTaGGTCTGCCAGCAACTTGGT +
Preference number: 2 (lower is better)
Translates to: LALFFPLQSIWSSWNCRRPAPSQ*VCQQLG
Trigger: ACCAAGTTGCTGGCAGACTCACTGGGAGGGCGCGGG...TCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAAAAGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR TCA 90 bp CTGGCTCTTTTCTTTCCCTTGCAGTCCATTTGGTCCAGCTGGAACTGCAGGCGACGGGTGGTGACCCGCTaGGCTCGGCTTGCATATCGC +
Preference number: 2 (lower is better)
Translates to: LALFFPLQSIWSSWNCRRRVVTR*ARLAYR
Trigger: GCGATATGCAAGCCGAGCTCAGCGGGTCACCACCCG...TCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAAAAGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR CCA 90 bp GATGCGCTGCTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTTTTCTCCCGGAAAGGGATGTaGCTCTGCTTCCGCTGTGGG +
Preference number: 2 (lower is better)
Translates to: DALLILGQVSAILQLALFSRKGM*LCFRCG
Trigger: CCCACAGCGGAAGCAGAGCCACATCCCTTTCCGGGA...GAAAAGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR GCA 90 bp CCCAGTGAGTCTGCCAGCAACTTGGTGAGCTTGCTGTCCCGGAAAGGGATGTGGCCAGCAGCAGGGAGATaGAGTGACAGTTTGACGGCT +
Preference number: 2 (lower is better)
Translates to: PSESASNLVSLLSRKGMWPAAGR*SDSLTA
Trigger: AGCCGTCAAACTGTCACTGCATCTCCCTGCTGCTGG...CCACATCCCTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR GCA 90 bp TTTCTTTCCCTTGCAGTCCATTTGGTCCAGCTGGAACTGCAGGCGACGGTTCTCACGCTGGGGCTGCTTTaGCACAGGAGACTTGGGGGC +
Preference number: 2 (lower is better)
Translates to: FLSLAVHLVQLELQATVLTLGLL*HRRLGG
Trigger: GCCCCCAAGTCTCCTGTGGCAAAGCAGCCCCAGCGT...GAGAACCGTCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR CCA 90 bp CTGGCTCTTTTCTTTCCCTTGCAGTCCATTTGGTCCAGCTGGAACTGCAGGCGATTGCCACAGGAGACTTaGGGGCCTGTGGTCGGGTGG +
Preference number: 2 (lower is better)
Translates to: LALFFPLQSIWSSWNCRRLPQET*GPVVGW
Trigger: CCACCCGACCACAGGCCCCCAAGTCTCCTGTGGCAA...TCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAAAAGAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR TCA 90 bp GGCTCTTTTCTTTCCCTTGCAGTCCATTTGGTCCAGCTGGAACTGCAGGCGACGCTGCCAGCAACTTGGTaGGCTTGCTGTCCCGGAAAG +
Preference number: 2 (lower is better)
Translates to: GSFLSLAVHLVQLELQATLPATW*ACCPGK
Trigger: CTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAG...CGTCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAAAAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR CCA 90 bp TTTCTTTCCCTTGCAGTCCATTTGGTCCAGCTGGAACTGCAGGCGACGGTTCTCGCTCTGCTTCCGCTGTaGGTCCAGCAGCAGGGAGAT +
Preference number: 2 (lower is better)
Translates to: FLSLAVHLVQLELQATVLALLPL*VQQQGD
Trigger: ATCTCCCTGCTGCTGGACCCACAGCGGAAGCAGAGC...GAGAACCGTCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR CCA 90 bp TGCGCTGCTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTTTTCTTTCTGTCTCCAAACGCTaGGGCTGCTTTGCCACAGGA +
Preference number: 2 (lower is better)
Translates to: CAAHSGPGLGYSAAGSFLSVSKR*GCFATG
Trigger: TCCTGTGGCAAAGCAGCCCCAGCGTTTGGAGACAGA...AAGAAAAGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR TCA 90 bp GATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAATGTGTGGAGCCCAGTCTaGGGTCACACAGCAGTCTCC +
Preference number: 2 (lower is better)
Translates to: DASLYSCISSPAAWFLLNVWSPV*GHTAVS
Trigger: GGAGACTGCTGTGTGACCTCAGACTGGGCTCCACAC...ATTCAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000640217.1
3UTR-3UTR TCA 90 bp TTGGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCAGCAGATGGGCAGACTaGAGCCCAAGAGTGTGGAGC +
Preference number: 2 (lower is better)
Translates to: LELMPLFIHVFHPLLPGFSRWAD*SPRVWS
Trigger: GCTCCACACTCTTGGGCTTCAGTCTGCCCATCTGCT...GAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640217.1
ENST00000643988.1
3UTR-3UTR GCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCAGGTGGAGTAGCAGCTaGTGTCTCCATTCAGCAGAT +
Preference number: 2 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSRWSSS*CLHSAD
Trigger: ATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCT...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000640217.1
ENST00000643988.1
3UTR TCA 72 bp GCAGGCCACCATGAGGGTGACCCCGCGCCCTCCCAGTaGGTCTGCCAGCAACTTGGTGAGCTTGCTGTCCCG +
Preference number: 3 (lower is better)
Translates to: AGHHEGDPAPSQ*VCQQLGELAVP
Trigger: CGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTCACTGGGAGGGCGCGGGGTCACCCTCATGGTGGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR CCA 72 bp GCAAGGGGGAGCTGGGGCCATCAAGCAGGGACACGGTaGGGTCAGGCCAGGACCCTGCTGGTGATGGTAGCA +
Preference number: 3 (lower is better)
Translates to: ARGSWGHQAGTR*GQARTLLVMVA
Trigger: TGCTACCATCACCAGCAGGGTCCTGGCCTGACCCCACCGTGTCCCTGCTTGATGGCCCCAGCTCCCCCTTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR TCA 72 bp GGAGACTTGGGGGCCTGTGGTCGGGTGGTGACCCGCTaGGCTCGGCTTGCATATCGCAGGGTGCTGAGAGTC +
Preference number: 3 (lower is better)
Translates to: GDLGACGRVVTR*ARLAYRRVLRV
Trigger: GACTCTCAGCACCCTGCGATATGCAAGCCGAGCTCAGCGGGTCACCACCCGACCACAGGCCCCCAAGTCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR TCA 72 bp TTGCCACAGGAGACTTGGGGGCCTGTGGTCGGGTGGTaGCCCGCTGAGCTCGGCTTGCATATCGCAGGGTGC +
Preference number: 3 (lower is better)
Translates to: LPQETWGPVVGW*PAELGLHIAGC
Trigger: GCACCCTGCGATATGCAAGCCGAGCTCAGCGGGTCACCACCCGACCACAGGCCCCCAAGTCTCCTGTGGCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR TCA 72 bp CCCCGCGCCCTCCCAGTGAGTCTGCCAGCAACTTGGTaGGCTTGCTGTCCCGGAAAGGGATGTGGCTCTGCT +
Preference number: 3 (lower is better)
Translates to: PRALPVSLPATW*ACCPGKGCGSA
Trigger: AGCAGAGCCACATCCCTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTCACTGGGAGGGCGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR GCA 72 bp CAGGCAGAGAGGAGACGCCTCTCTAGTGCATGGACCTaGTGGGCCAGGATGCGCTGCTCATTCTGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: QAERRRLSSAWT*WARMRCSFWAR
Trigger: CCTGGCCCAGAATGAGCAGCGCATCCTGGCCCAGCAGGTCCATGCACTAGAGAGGCGTCTCCTCTCTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR CAA 90 bp GGAAGGCACTGGGCTGAGGGGGACACGCAGGCCACCATGAGGGTGACCCCGCGCAGATGCAGTGACAGTTaGACGGCTGATGTAAAGGGT +
Preference number: 3 (lower is better)
Translates to: GRHWAEGDTQATMRVTPRRCSDS*TADVKG
Trigger: ACCCTTTACATCAGCCGTCAAACTGTCACTGCATCT...GCGCGGGGTCACCCTCATGGTGGCCTGCGTGTCCCCCTCAGCCCAGTGCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR CAA 90 bp CCAGGATGCGCTGCTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTTTTGCCACAGGAGACTaGGGGGCCTGTGGTCGGGTG +
Preference number: 3 (lower is better)
Translates to: PGCAAHSGPGLGYSAAGSFATGD*GACGRV
Trigger: CACCCGACCACAGGCCCCCAAGTCTCCTGTGGCAAA...AGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR GCA 72 bp TGGAGCTGCAGCATCTCTGTCTCCAAACGCTGGGGCTaGTTTGCCACAGGAGACTTGGGGGCCTGTGGTCGG +
Preference number: 3 (lower is better)
Translates to: WSCSISVSKRWG*FATGDLGACGR
Trigger: CCGACCACAGGCCCCCAAGTCTCCTGTGGCAAAGCAGCCCCAGCGTTTGGAGACAGAGATGCTGCAGCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR CCA 72 bp GCAGAGAGGAGACGCCTCTCTAGTGCATGGACCTGCTaGGCCAGGATGCGCTGCTCATTCTGGGCCAGGTCT +
Preference number: 3 (lower is better)
Translates to: AERRRLSSAWTC*ARMRCSFWARS
Trigger: AGACCTGGCCCAGAATGAGCAGCGCATCCTGGCCCAGCAGGTCCATGCACTAGAGAGGCGTCTCCTCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR GCA 72 bp TTGGTGAGCTTGCTGTCCCGGAAAGGGATGTGGCTCTaGTTCCGCTGTGGGTCCAGCAGCAGGGAGATGCAG +
Preference number: 3 (lower is better)
Translates to: LVSLLSRKGMWL*FRCGSSSREMQ
Trigger: CTGCATCTCCCTGCTGCTGGACCCACAGCGGAAGCAGAGCCACATCCCTTTCCGGGACAGCAAGCTCACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR GCA 72 bp CTCTCTAGTGCATGGACCTGCTGGGCCAGGATGCGCTaGTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGC +
Preference number: 3 (lower is better)
Translates to: LSSAWTCWARMR*SFWARSRLFCS
Trigger: GCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATCCTGGCCCAGCAGGTCCATGCACTAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR GCA 72 bp GACGCCTCTCTAGTGCATGGACCTGCTGGGCCAGGATaGGCTGCTCATTCTGGGCCAGGTCTCGGCTATTCT +
Preference number: 3 (lower is better)
Translates to: DASLVHGPAGPG*AAHSGPGLGYS
Trigger: AGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATCCTGGCCCAGCAGGTCCATGCACTAGAGAGGCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR GCA 72 bp AGCTGGAACTGCAGGCGACGGTTCTCCTCCTGGAGCTaGAGCATCTCTGTCTCCAAACGCTGGGGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: SWNCRRRFSSWS*SISVSKRWGCF
Trigger: AAAGCAGCCCCAGCGTTTGGAGACAGAGATGCTGCAGCTCCAGGAGGAGAACCGTCGCCTGCAGTTCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR-3UTR CAA 90 bp CTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTTTTCTTTCCCTTGAACGCTGGGGCTGCTTaGCCACAGGAGACTTGGGGG +
Preference number: 3 (lower is better)
Translates to: LILGQVSAILQLALFFPLNAGAA*PQETWG
Trigger: CCCCCAAGTCTCCTGTGGCAAAGCAGCCCCAGCGTT...CAAGGGAAAGAAAAGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR GCA 72 bp TTCTTTCCCTTGCAGTCCATTTGGTCCAGCTGGAACTaGAGGCGACGGTTCTCCTCCTGGAGCTGCAGCATC +
Preference number: 3 (lower is better)
Translates to: FFPLQSIWSSWN*RRRFSSWSCSI
Trigger: GATGCTGCAGCTCCAGGAGGAGAACCGTCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR CCA 72 bp GCTCTTTTCTTTCCCTTGCAGTCCATTTGGTCCAGCTaGAACTGCAGGCGACGGTTCTCCTCCTGGAGCTGC +
Preference number: 3 (lower is better)
Translates to: ALFFPLQSIWSS*NCRRRFSSWSC
Trigger: GCAGCTCCAGGAGGAGAACCGTCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAAAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR CCA 72 bp CTGCAGCTGGCTCTTTTCTTTCCCTTGCAGTCCATTTaGTCCAGCTGGAACTGCAGGCGACGGTTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: LQLALFFPLQSI*SSWNCRRRFSS
Trigger: GGAGGAGAACCGTCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAAAAGAGCCAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
3UTR CCA 72 bp TGCTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGCTaGCTCTTTTCTTTCCCTTGCAGTCCATTTGGTCCA +
Preference number: 3 (lower is better)
Translates to: CSFWARSRLFCS*LFSFPCSPFGP
Trigger: TGGACCAAATGGACTGCAAGGGAAAGAAAAGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR TCA 90 bp GGGGACACGCAGGCCACCATGAGGGTGACCCCGCGCCCTCCCAGTGAGTCTGCCCCCGCGCCCTCCCAGTaGGTCTGCCAGCAACTTGGT +
Preference number: 4 (lower is better)
Translates to: GDTQATMRVTPRPPSESAPAPSQ*VCQQLG
Trigger: ACCAAGTTGCTGGCAGACTCACTGGGAGGGCGCGGG...GGCAGACTCACTGGGAGGGCGCGGGGTCACCCTCATGGTGGCCTGCGTGTCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp GGGGACACGCAGGCCACCATGAGGGTGACCCCGCGCCCTCCCAGTGAGTCTGCCAGACTTGGGGGCCTGTaGTCGGGTGGTGACCCGCTG +
Preference number: 4 (lower is better)
Translates to: GDTQATMRVTPRPPSESARLGGL*SGGDPL
Trigger: CAGCGGGTCACCACCCGACCACAGGCCCCCAAGTCT...GGCAGACTCACTGGGAGGGCGCGGGGTCACCCTCATGGTGGCCTGCGTGTCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp GGGGACACGCAGGCCACCATGAGGGTGACCCCGCGCCCTCCCAGTGAGTCTGCCCTTCGGCTGGAGGCCTaGTTCAGGGTGTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GDTQATMRVTPRPPSESALRLEA*FRVWAE
Trigger: CTCAGCCCACACCCTGAACCAGGCCTCCAGCCGAAG...GGCAGACTCACTGGGAGGGCGCGGGGTCACCCTCATGGTGGCCTGCGTGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp GGGGACACGCAGGCCACCATGAGGGTGACCCCGCGCCCTCCCAGTGAGTCTGCCTTGCCACAGGAGACTTaGGGGCCTGTGGTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: GDTQATMRVTPRPPSESALPQET*GPVVGW
Trigger: CCACCCGACCACAGGCCCCCAAGTCTCCTGTGGCAA...GGCAGACTCACTGGGAGGGCGCGGGGTCACCCTCATGGTGGCCTGCGTGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp GGAAGGCACTGGGCTGAGGGGGACACGCAGGCCACCATGAGGGTGACCCCGCGCATGGCAAGGGGGAGCTaGGGCCATCAAGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GRHWAEGDTQATMRVTPRMARGS*GHQAGT
Trigger: TGTCCCTGCTTGATGGCCCCAGCTCCCCCTTGCCAT...GCGCGGGGTCACCCTCATGGTGGCCTGCGTGTCCCCCTCAGCCCAGTGCCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR GCA 90 bp GCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCATCCGTGCGCCCTCACTaGAGGGTGGCTGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: AQECGAQSEVTQQSPGFPSVRPH*RVAGCG
Trigger: GCCGCAGCCAGCCACCCTGCAGTGAGGGCGCACGGA...TGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCAGGCCCCTCTGGCCCTTaGTCCAGGCTCCGCGCGAGA +
Preference number: 4 (lower is better)
Translates to: AQECGAQSEVTQQSPGFPGPSGP*SRLRAR
Trigger: TCTCGCGCGGAGCCTGGAGCAAGGGCCAGAGGGGCC...TGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468460.2
CDS-3UTR CCA 90 bp GGAAGGCACTGGGCTGAGGGGGACACGCAGGCCACCATGAGGGTGACCCCGCGCTCTGTCTCCAAACGCTaGGGCTGCTTTGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: GRHWAEGDTQATMRVTPRSVSKR*GCFATG
Trigger: TCCTGTGGCAAAGCAGCCCCAGCGTTTGGAGACAGA...GCGCGGGGTCACCCTCATGGTGGCCTGCGTGTCCCCCTCAGCCCAGTGCCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp AGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTTGGCCCAGGTGGTGCTCCCCTaGCAGGCAGGCCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: SVEPSLRSHSSLLGSHLAQVVLP*QAGPVG
Trigger: GCCCACTGGGCCTGCCTGCCAGGGGAGCACCACCTG...GGCCAAGTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp ACCTGCTGGGCCAGGATGCGCTGCTCATTCTGGGCCAGGTCTCGGCTATTCTGCAAGAGGCGCGAAGGGTaGCAGGGGCACCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: TCWARMRCSFWARSRLFCKRREG*QGHPGA
Trigger: AGCACCTGGGTGCCCCTGTCACCCTTCGCGCCTCTT...GCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATCCTGGCCCAGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR TCA 90 bp CGCCCTCCCAGTGAGTCTGCCAGCAACTTGGTGAGCTTGCTGTCCCGGAAAGGGCGGGTGGTGACCCGCTaGGCTCGGCTTGCATATCGC +
Preference number: 4 (lower is better)
Translates to: RPPSESASNLVSLLSRKGRVVTR*ARLAYR
Trigger: GCGATATGCAAGCCGAGCTCAGCGGGTCACCACCCG...CCCTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTCACTGGGAGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR TCA 90 bp GCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACCTGTGGTCGGGTGGTaGCCCGCTGAGCTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: AQECGAQSEVTQQSPGFPPVVGW*PAELGL
Trigger: CAAGCCGAGCTCAGCGGGTCACCACCCGACCACAGG...TGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp CCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTGCAGCACGCTCTGCTaGCCTCGACGCAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: PKSVEPSLRSHSSLLGSHCSTLC*PRRSSA
Trigger: GGCCGAGCTGCGTCGAGGGCAGCAGAGCGTGCTGCA...GTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCAGGGGCACCCAGGTGCTaGACGCGGTCCAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: AQECGAQSEVTQQSPGFPGAPRC*TRSNSQ
Trigger: CTGGCTGTTGGACCGCGTGCAGCACCTGGGTGCCCC...TGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCAGGGCAGATGGGGGCCTaGCACCTGAGGCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: AQECGAQSEVTQQSPGFPGQMGA*HLRPQG
Trigger: ACCCTGAGGCCTCAGGTGGCAGGCCCCCATCTGCCC...TGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCTGCAGGGTGGCTGGCTaGGGCCACGTCGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPCRVAG*GHVAGS
Trigger: GCTCCCTGCGACGTGGCCGCAGCCAGCCACCCTGCA...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR GCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCTCCGTGCGCCCTCACTaGAGGGTGGCTGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPSVRPH*RVAGCG
Trigger: GCCGCAGCCAGCCACCCTGCAGTGAGGGCGCACGGA...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR GCA 90 bp AGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTTGGCCTTGGCCTGGGCTCCGTaGGCCCTCACTGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SVEPSLRSHSSLLGSHLALAWAP*ALTAGW
Trigger: CCACCCTGCAGTGAGGGCGCACGGAGCCCAGGCCAA...GGCCAAGTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp CCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACCGGAACACGTCCTCCTaGGTGCGCGCCGCGTCTAGC +
Preference number: 4 (lower is better)
Translates to: PKSVEPSLRSHSSLLGSHRNTSS*VRAASS
Trigger: GCTAGACGCGGCGCGCACGCAGGAGGACGTGTTCCG...GTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468460.2
CDS-3UTR CCA 90 bp CTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTCCGTACAGGTTCCGCTaGGCCCAGGCCACCCGGGCT +
Preference number: 4 (lower is better)
Translates to: LKPKSVEPSLRSHSSLLGPYRFR*AQATRA
Trigger: AGCCCGGGTGGCCTGGGCCCAGCGGAACCTGTACGG...ACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCCAGGTGGTGCTCCCCTaGCAGGCAGGCCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPQVVLP*QAGPVG
Trigger: GCCCACTGGGCCTGCCTGCCAGGGGAGCACCACCTG...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp AGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTTGGCCTCACTGCAGGGTGGCTaGCTGCGGCCACGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: SVEPSLRSHSSLLGSHLASLQGG*LRPRRR
Trigger: CCTGCGACGTGGCCGCAGCCAGCCACCCTGCAGTGA...GGCCAAGTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
3UTR CAA 72 bp GTGACCCCGCGCCCTCCCAGTGAGTCTGCCAGCAACTaGGTGAGCTTGCTGTCCCGGAAAGGGATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VTPRPPSESASN*VSLLSRKGMWL
Trigger: GAGCCACATCCCTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTCACTGGGAGGGCGCGGGGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR TCA 90 bp AGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTTGGCCCGAAGGTCCTCTGCATaGTGCCAGCCAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SVEPSLRSHSSLLGSHLARRSSA*CQPGWG
Trigger: CCCCCAGCCTGGCTGGCATCATGCAGAGGACCTTCG...GGCCAAGTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp CCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACCGGGTGGTGACCCGCTaGGCTCGGCTTGCATATCGC +
Preference number: 4 (lower is better)
Translates to: PKSVEPSLRSHSSLLGSHRVVTR*ARLAYR
Trigger: GCGATATGCAAGCCGAGCTCAGCGGGTCACCACCCG...GTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCTGGGGGCCTGCCACCTaGGGCCTCAGGGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPWGPAT*GLRVQH
Trigger: GTGTTGGACCCTGAGGCCTCAGGTGGCAGGCCCCCA...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp CTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTGGGGGCCTGCCACCTaGGGCCTCAGGGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: LKPKSVEPSLRSHSSLLGWGPAT*GLRVQH
Trigger: GTGTTGGACCCTGAGGCCTCAGGTGGCAGGCCCCCA...ACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp GGGGACACGCAGGCCACCATGAGGGTGACCCCGCGCCCTCCCAGTGAGTCTGCCAGTTCCTTCGACGGCTaGGACCTGCTCATTGTAGAT +
Preference number: 4 (lower is better)
Translates to: GDTQATMRVTPRPPSESASSFDG*DLLIVD
Trigger: ATCTACAATGAGCAGGTCTCAGCCGTCGAAGGAACT...GGCAGACTCACTGGGAGGGCGCGGGGTCACCCTCATGGTGGCCTGCGTGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR GCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCTGCAGCACGCTCTGCTaGCCTCGACGCAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPCSTLC*PRRSSA
Trigger: GGCCGAGCTGCGTCGAGGGCAGCAGAGCGTGCTGCA...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCGGGGCACCCAGGTGCTaGACGCGGTCCAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPGAPRC*TRSNSQ
Trigger: CTGGCTGTTGGACCGCGTGCAGCACCTGGGTGCCCC...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp CCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACACAGGGGCACCCAGGTaGTGCACGCGGTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: PKSVEPSLRSHSSLLGSHTGAPR*CTRSNS
Trigger: GCTGTTGGACCGCGTGCAGCACCTGGGTGCCCCTGT...GTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp TGCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCTGCAGGGTGGCTGGCTaGGGCCACGTCGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: CRWSSSCCLHSADGQTEACRVAG*GHVAGS
Trigger: GCTCCCTGCGACGTGGCCGCAGCCAGCCACCCTGCA...GGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR GCA 90 bp ACTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTGGCCTGGGCTCCGTaGGCCCTCACTGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: TEAQECGAQSEVTQQSPGLAWAP*ALTAGW
Trigger: CCACCCTGCAGTGAGGGCGCACGGAGCCCAGGCCAA...CCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCACACGTCCTCCTGCGTaGGCGCCGCGTCTAGCACCG +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPTRPPA*APRLAP
Trigger: CGGTGCTAGACGCGGCGCGCACGCAGGAGGACGTGT...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468460.2
CDS-3UTR CCA 90 bp TGCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCGCTCGGCCGCGCTCATaGGACGTACCCTGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: CRWSSSCCLHSADGQTEAARPRS*DVPWGP
Trigger: CGGACCCCAGGGTACGTCCCATGAGCGCGGCCGAGC...GGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374118.8
CDS-3UTR CCA 90 bp AGCATCTCTGTCTCCAAACGCTGGGGCTGCTTTGCCACAGGAGACTTGGGGGCCAGGGTGAGCAGGGCATaGCTTCGGCTGGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SISVSKRWGCFATGDLGARVSRA*LRLEAW
Trigger: CCAGGCCTCCAGCCGAAGCCATGCCCTGCTCACCCT...GGCCCCCAAGTCTCCTGTGGCAAAGCAGCCCCAGCGTTTGGAGACAGAGATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp GCTTGCTGTCCCGGAAAGGGATGTGGCTCTGCTTCCGCTGTGGGTCCAGCAGCAGTCTCAGGAAGGCACTaGGCTGAGGGGGACACGCAG +
Preference number: 4 (lower is better)
Translates to: ACCPGKGCGSASAVGPAAVSGRH*AEGDTQ
Trigger: CTGCGTGTCCCCCTCAGCCCAGTGCCTTCCTGAGAC...TGCTGCTGGACCCACAGCGGAAGCAGAGCCACATCCCTTTCCGGGACAGCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp CCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACAGGGAGGACTTGGCCTaGGCTCCGTGCGCCCTCACT +
Preference number: 4 (lower is better)
Translates to: PKSVEPSLRSHSSLLGSHREDLA*APCALT
Trigger: AGTGAGGGCGCACGGAGCCCAGGCCAAGTCCTCCCT...GTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCAAGGGAGGACTTGGCCTaGGCTCCGTGCGCCCTCACT +
Preference number: 4 (lower is better)
Translates to: AQECGAQSEVTQQSPGFPREDLA*APCALT
Trigger: AGTGAGGGCGCACGGAGCCCAGGCCAAGTCCTCCCT...TGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp CTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTCAGAGTCCGGGTCCCTaGGCAGTGCAGCACGCTCTG +
Preference number: 4 (lower is better)
Translates to: LKPKSVEPSLRSHSSLLGQSPGP*AVQHAL
Trigger: CAGAGCGTGCTGCACTGCTCAGGGACCCGGACTCTG...ACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp CTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTAAGAGGCGCGAAGGGTaGCAGGGGCACCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LKPKSVEPSLRSHSSLLGKRREG*QGHPGA
Trigger: AGCACCTGGGTGCCCCTGTCACCCTTCGCGCCTCTT...ACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCCCCGCGCCCTCCCAGTaGGTCTGCCAGCAACTTGGT +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPPAPSQ*VCQQLG
Trigger: ACCAAGTTGCTGGCAGACTCACTGGGAGGGCGCGGG...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp CCCAGTGAGTCTGCCAGCAACTTGGTGAGCTTGCTGTCCCGGAAAGGGATGTGGACAGGGGCACCCAGGTaGTGCACGCGGTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: PSESASNLVSLLSRKGMWTGAPR*CTRSNS
Trigger: GCTGTTGGACCGCGTGCAGCACCTGGGTGCCCCTGT...CCACATCCCTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTCACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR GCA 90 bp AGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTTGGCCCCAGCAGCAGGGAGATaGAGTGACCCAGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SVEPSLRSHSSLLGSHLAPAAGR*SDPGPA
Trigger: TGCTGGCCCTGGGTCACTGCATCTCCCTGCTGCTGG...GGCCAAGTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp AGCATCTCTGTCTCCAAACGCTGGGGCTGCTTTGCCACAGGAGACTTGGGGGCCACGCTGGGGCTGCTTTaGCACAGGAGACTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SISVSKRWGCFATGDLGATLGLL*HRRLGG
Trigger: GCCCCCAAGTCTCCTGTGGCAAAGCAGCCCCAGCGT...GGCCCCCAAGTCTCCTGTGGCAAAGCAGCCCCAGCGTTTGGAGACAGAGATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR GCA 90 bp TGGTCGGGTGGTGACCCGCTGAGCTCGGCTTGCATATCGCAGGGTGCTGAGAGTTGGTCCAGCTGGAACTaGAGGCGACGGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WSGGDPLSSACISQGAESWSSWN*RRRFSS
Trigger: GGAGGAGAACCGTCGCCTGCAGTTCCAGCTGGACCA...ACTCTCAGCACCCTGCGATATGCAAGCCGAGCTCAGCGGGTCACCACCCGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR GCA 90 bp CCAGGATGCGCTGCTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTGTAGAGGGGTGGCAGTaGATGGCAAGGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGCAAHSGPGLGYSAAGSVEGWQ*MARGSW
Trigger: CCAGCTCCCCCTTGCCATGCACTGCCACCCCTCTAC...AGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp AGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTTGGCCGGGCATGGCTTCGGCTaGAGGCCTGGTTCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SVEPSLRSHSSLLGSHLAGHGFG*RPGSGC
Trigger: ACACCCTGAACCAGGCCTCCAGCCGAAGCCATGCCC...GGCCAAGTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCAGGGTGAGCAGGGCATaGCTTCGGCTGGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPRVSRA*LRLEAW
Trigger: CCAGGCCTCCAGCCGAAGCCATGCCCTGCTCACCCT...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp CCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACCCCCACGGGATCCCGTaGCTGCTACCTTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: PKSVEPSLRSHSSLLGSHPHGIP*LLPSHC
Trigger: GCAGTGAGAAGGTAGCAGCCACGGGATCCCGTGGGG...GTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp ACTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGAGACTTGGGGGCCTGTaGTCGGGTGGTGACCCGCTG +
Preference number: 4 (lower is better)
Translates to: TEAQECGAQSEVTQQSPGRLGGL*SGGDPL
Trigger: CAGCGGGTCACCACCCGACCACAGGCCCCCAAGTCT...CCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp CTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTAGACTTGGGGGCCTGTaGTCGGGTGGTGACCCGCTG +
Preference number: 4 (lower is better)
Translates to: LKPKSVEPSLRSHSSLLGRLGGL*SGGDPL
Trigger: CAGCGGGTCACCACCCGACCACAGGCCCCCAAGTCT...ACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp CTTTGCCACAGGAGACTTGGGGGCCTGTGGTCGGGTGGTGACCCGCTGAGCTCGATGCGCTGCTCATTCTaGGCCAGGTCTCGGCTATTC +
Preference number: 4 (lower is better)
Translates to: LCHRRLGGLWSGGDPLSSMRCSF*ARSRLF
Trigger: GAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCAT...CGAGCTCAGCGGGTCACCACCCGACCACAGGCCCCCAAGTCTCCTGTGGCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp CGCCCTCCCAGTGAGTCTGCCAGCAACTTGGTGAGCTTGCTGTCCCGGAAAGGGCGCCTCTCTAGTGCATaGACCTGCTGGGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: RPPSESASNLVSLLSRKGRLSSA*TCWARM
Trigger: CATCCTGGCCCAGCAGGTCCATGCACTAGAGAGGCG...CCCTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTCACTGGGAGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp CTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTAACACCTGGGGCAGGTaGTGCTCCCCTGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LKPKSVEPSLRSHSSLLGNTWGR*CSPGRQ
Trigger: CTGCCTGCCAGGGGAGCACCACCTGCCCCAGGTGTT...ACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp TGCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCTCACTGCAGGGTGGCTaGCTGCGGCCACGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: CRWSSSCCLHSADGQTEASLQGG*LRPRRR
Trigger: CCTGCGACGTGGCCGCAGCCAGCCACCCTGCAGTGA...GGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
3UTR CAA 72 bp CGCCCTCCCAGTGAGTCTGCCAGCAACTTGGTGAGCTaGCTGTCCCGGAAAGGGATGTGGCTCTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: RPPSESASNLVS*LSRKGMWLCFR
Trigger: GCGGAAGCAGAGCCACATCCCTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTCACTGGGAGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR TCA 90 bp CCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACGTTCAGGGTGTGGGCTaGGTTCCTTCGACGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PKSVEPSLRSHSSLLGSHVQGVG*VPSTAE
Trigger: CTCAGCCGTCGAAGGAACTCAGCCCACACCCTGAAC...GTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp TGCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCCCGCGCCCTCCCAGTaGGTCTGCCAGCAACTTGGT +
Preference number: 4 (lower is better)
Translates to: CRWSSSCCLHSADGQTEAPAPSQ*VCQQLG
Trigger: ACCAAGTTGCTGGCAGACTCACTGGGAGGGCGCGGG...GGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp GCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCATGCCAATCTGGTCTCTaGGGGCCTCCAGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AQECGAQSEVTQQSPGFPCQSGL*GPPVSG
Trigger: CCCAGAGACTGGAGGCCCTCAGAGACCAGATTGGCA...TGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp CCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACGTGTGGAGCCCAGTCTaGGGTCACACAGCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: PKSVEPSLRSHSSLLGSHVWSPV*GHTAVS
Trigger: GGAGACTGCTGTGTGACCTCAGACTGGGCTCCACAC...GTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp GCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCAGTGTGGAGCCCAGTCTaGGGTCACACAGCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: AQECGAQSEVTQQSPGFPVWSPV*GHTAVS
Trigger: GGAGACTGCTGTGTGACCTCAGACTGGGCTCCACAC...TGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp TGCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCAGTGCAGCACGCTCTaGTGCCCTCGACGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: CRWSSSCCLHSADGQTEAQCSTL*CPRRSS
Trigger: CGAGCTGCGTCGAGGGCAGCAGAGCGTGCTGCACTG...GGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp TGCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCGGGTCCCTGAGCAGTaGAGCACGCTCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: CRWSSSCCLHSADGQTEARVPEQ*STLCCP
Trigger: AGGGCAGCAGAGCGTGCTGCACTGCTCAGGGACCCG...GGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp AGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTTGGCCACGGGATCCCGTGGCTaGTACCTTCTCACTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SVEPSLRSHSSLLGSHLATGSRG*YLLTAC
Trigger: GCAGGCAGTGAGAAGGTAGCAGCCACGGGATCCCGT...GGCCAAGTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp AGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTTGGCCTGGGCCAGGATGCGCTaGTCATTCTGGGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SVEPSLRSHSSLLGSHLAWARMR*SFWARS
Trigger: AGACCTGGCCCAGAATGAGCAGCGCATCCTGGCCCA...GGCCAAGTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCGTAGAGGGGTGGCAGTaGATGGCAAGGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPVEGWQ*MARGSW
Trigger: CCAGCTCCCCCTTGCCATGCACTGCCACCCCTCTAC...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCAGCCTGGTTCAGGGTGTaGGCTGAGTTCCTTCGACGG +
Preference number: 4 (lower is better)
Translates to: AQECGAQSEVTQQSPGFPAWFRV*AEFLRR
Trigger: CCGTCGAAGGAACTCAGCCCACACCCTGAACCAGGC...TGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCCTTCGGCTGGAGGCCTaGTTCAGGGTGTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPLRLEA*FRVWAE
Trigger: CTCAGCCCACACCCTGAACCAGGCCTCCAGCCGAAG...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp AGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTTGGCCTCCCGGAAAGGGATGTaGCTCTGCTTCCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SVEPSLRSHSSLLGSHLASRKGM*LCFRCG
Trigger: CCCACAGCGGAAGCAGAGCCACATCCCTTTCCGGGA...GGCCAAGTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp ACTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTGCCACAGGAGACTTaGGGGCCTGTGGTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: TEAQECGAQSEVTQQSPGLPQET*GPVVGW
Trigger: CCACCCGACCACAGGCCCCCAAGTCTCCTGTGGCAA...CCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCAAGTGCATGGACCTGCTaGGCCAGGATGCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: AQECGAQSEVTQQSPGFPSAWTC*ARMRCS
Trigger: TGAGCAGCGCATCCTGGCCCAGCAGGTCCATGCACT...TGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp AGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTTGGCCCGCCTCTCTAGTGCATaGACCTGCTGGGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: SVEPSLRSHSSLLGSHLARLSSA*TCWARM
Trigger: CATCCTGGCCCAGCAGGTCCATGCACTAGAGAGGCG...GGCCAAGTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCGGGCACTCGACACAGTaGGCAGATGTGGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPGHSTQ*ADVAAG
Trigger: CCCTGCTGCCACATCTGCCCACTGTGTCGAGTGCCC...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp ACTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTCTCTGGGCCAGGTTTaGAACCCCGGCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: TEAQECGAQSEVTQQSPGSLGQV*NPGPTS
Trigger: AGAGGTGGGGCCGGGGTTCCAAACCTGGCCCAGAGA...CCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp CTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCTCTGGGCCAGGTTTaGAACCCCGGCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: LKPKSVEPSLRSHSSLLGSLGQV*NPGPTS
Trigger: AGAGGTGGGGCCGGGGTTCCAAACCTGGCCCAGAGA...ACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCAGGGCCTCCAGTCTCTaGGCCAGGTTTGGAACCCCG +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPRASSL*ARFGTP
Trigger: CGGGGTTCCAAACCTGGCCCAGAGACTGGAGGCCCT...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR TCA 90 bp ACTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGGTTCAGGGTGTGGGCTaGGTTCCTTCGACGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TEAQECGAQSEVTQQSPGVQGVG*VPSTAE
Trigger: CTCAGCCGTCGAAGGAACTCAGCCCACACCCTGAAC...CCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp CCCAGTGAGTCTGCCAGCAACTTGGTGAGCTTGCTGTCCCGGAAAGGGATGTGGGTTCAGGGTGTGGGCTaGGTTCCTTCGACGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PSESASNLVSLLSRKGMWVQGVG*VPSTAE
Trigger: CTCAGCCGTCGAAGGAACTCAGCCCACACCCTGAAC...CCACATCCCTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR TCA 90 bp CCAGGATGCGCTGCTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTCTGCCAGCAACTTGGTaGGCTTGCTGTCCCGGAAAG +
Preference number: 4 (lower is better)
Translates to: PGCAAHSGPGLGYSAAGSLPATW*ACCPGK
Trigger: CTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAG...AGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR TCA 90 bp CGCCCTCCCAGTGAGTCTGCCAGCAACTTGGTGAGCTTGCTGTCCCGGAAAGGGCATATCGCAGGGTGCTaGGAGTCTCAGGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: RPPSESASNLVSLLSRKGHIAGC*ESQEGT
Trigger: AGTGCCTTCCTGAGACTCTCAGCACCCTGCGATATG...CCCTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTCACTGGGAGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR TCA 90 bp CTGGCTCTTTTCTTTCCCTTGCAGTCCATTTGGTCCAGCTGGAACTGCAGGCGACCTGTGGTCGGGTGGTaGCCCGCTGAGCTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: LALFFPLQSIWSSWNCRRPVVGW*PAELGL
Trigger: CAAGCCGAGCTCAGCGGGTCACCACCCGACCACAGG...TCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAAAAGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR TCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCTGCCAATCTGGTCTCTaGGGGCCTCCAGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPCQSGL*GPPVSG
Trigger: CCCAGAGACTGGAGGCCCTCAGAGACCAGATTGGCA...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR GCA 90 bp ACTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGCAGGCGAAGGTCCTCTaGATGATGCCAGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TEAQECGAQSEVTQQSPGQAKVL*MMPARL
Trigger: CAGCCTGGCTGGCATCATGCAGAGGACCTTCGCCTG...CCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp CTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTCAGGCGAAGGTCCTCTaGATGATGCCAGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LKPKSVEPSLRSHSSLLGQAKVL*MMPARL
Trigger: CAGCCTGGCTGGCATCATGCAGAGGACCTTCGCCTG...ACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp AGATGCAGTGACAGTTTGACGGCTGATGTAAAGGGTGAGCAGGGCATGGCTTCGGGGGCACCCAGGTGCTaGACGCGGTCCAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: RCSDSLTADVKGEQGMASGAPRC*TRSNSQ
Trigger: CTGGCTGTTGGACCGCGTGCAGCACCTGGGTGCCCC...CGAAGCCATGCCCTGCTCACCCTTTACATCAGCCGTCAAACTGTCACTGCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR GCA 90 bp ACTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGCCGCTGAGCTCGGCTTaGATATCGCAGGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TEAQECGAQSEVTQQSPGPLSSA*ISQGAE
Trigger: CTCAGCACCCTGCGATATGCAAGCCGAGCTCAGCGG...CCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp CGCCCTCCCAGTGAGTCTGCCAGCAACTTGGTGAGCTTGCTGTCCCGGAAAGGGTCCAAACGCTGGGGCTaGTTTGCCACAGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: RPPSESASNLVSLLSRKGSKRWG*FATGDL
Trigger: CAAGTCTCCTGTGGCAAAGCAGCCCCAGCGTTTGGA...CCCTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTCACTGGGAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR GCA 90 bp TGCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCCTGCTGGGCCAGGATaGGCTGCTCATTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: CRWSSSCCLHSADGQTEAPAGPG*AAHSGP
Trigger: TGGCCCAGAATGAGCAGCGCATCCTGGCCCAGCAGG...GGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp CTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCTAGTGCATGGACCTaGTGGGCCAGGATGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LKPKSVEPSLRSHSSLLGSSAWT*WARMRC
Trigger: GCAGCGCATCCTGGCCCAGCAGGTCCATGCACTAGA...ACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp ACTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTCATGGGACGTACCCTaGGGTCCGACAGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TEAQECGAQSEVTQQSPGSWDVP*GPTEGQ
Trigger: CTGCCCTTCTGTCGGACCCCAGGGTACGTCCCATGA...CCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374118.8
CDS-3UTR CCA 90 bp CTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTGCTCTGCTTCCGCTGTaGGTCCAGCAGCAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: LKPKSVEPSLRSHSSLLGALLPL*VQQQGD
Trigger: ATCTCCCTGCTGCTGGACCCACAGCGGAAGCAGAGC...ACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCGCTCTGCTTCCGCTGTaGGTCCAGCAGCAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPALLPL*VQQQGD
Trigger: ATCTCCCTGCTGCTGGACCCACAGCGGAAGCAGAGC...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp TGCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCAGGGCCTCCAGTCTCTaGGCCAGGTTTGGAACCCCG +
Preference number: 4 (lower is better)
Translates to: CRWSSSCCLHSADGQTEARASSL*ARFGTP
Trigger: CGGGGTTCCAAACCTGGCCCAGAGACTGGAGGCCCT...GGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR CCA 90 bp GCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCATCCTGGGTTCCCACTTaGCCTTCAATGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: AQECGAQSEVTQQSPGFPSWVPT*PSMGRE
Trigger: CTCCCTCCCCATTGAAGGCCAAGTGGGAACCCAGGA...TGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCTCTCTGGGCCAGGTTTaGAACCCCGGCCCCACATCT +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPSLGQV*NPGPTS
Trigger: AGATGTGGGGCCGGGGTTCCAAACCTGGCCCAGAGA...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643988.1
CDS-3UTR TCA 90 bp GCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACATATCGCAGGGTGCTaGGAGTCTCAGGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: AQECGAQSEVTQQSPGFPHIAGC*ESQEGT
Trigger: AGTGCCTTCCTGAGACTCTCAGCACCCTGCGATATG...TGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCAAAGGGATGTGGCTCTaGTTCCGCTGTGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPKGMWL*FRCGSS
Trigger: GCTGGACCCACAGCGGAAGCAGAGCCACATCCCTTT...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp AGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTTGGCCTCCAAACGCTGGGGCTaGTTTGCCACAGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: SVEPSLRSHSSLLGSHLASKRWG*FATGDL
Trigger: CAAGTCTCCTGTGGCAAAGCAGCCCCAGCGTTTGGA...GGCCAAGTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp TGGTCCAGCTGGAACTGCAGGCGACGGTTCTCCTCCTGGAGCTGCAGCATCTCTCCAGCAGCAGGGAGATaGAGTGACAGTTTGACGGCT +
Preference number: 4 (lower is better)
Translates to: WSSWNCRRRFSSWSCSISPAAGR*SDSLTA
Trigger: AGCCGTCAAACTGTCACTGCATCTCCCTGCTGCTGG...AGAGATGCTGCAGCTCCAGGAGGAGAACCGTCGCCTGCAGTTCCAGCTGGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp GATGCGCTGCTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTTTTCAGTGCATGGACCTGCTaGGCCAGGATGCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: DALLILGQVSAILQLALFSAWTC*ARMRCS
Trigger: TGAGCAGCGCATCCTGGCCCAGCAGGTCCATGCACT...GAAAAGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp TGCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCGCCTCTCTAGTGCATaGACCTGCTGGGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: CRWSSSCCLHSADGQTEARLSSA*TCWARM
Trigger: CATCCTGGCCCAGCAGGTCCATGCACTAGAGAGGCG...GGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp ACTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGAGGGAGCTGCCAATCTaGTCTCTGAGGGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: TEAQECGAQSEVTQQSPGRELPI*SLRASS
Trigger: ACTGGAGGCCCTCAGAGACCAGATTGGCAGCTCCCT...CCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp CTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTAGGGAGCTGCCAATCTaGTCTCTGAGGGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LKPKSVEPSLRSHSSLLGRELPI*SLRASS
Trigger: ACTGGAGGCCCTCAGAGACCAGATTGGCAGCTCCCT...ACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp CTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCTGGGTTCCCACTTaGCCTTCAATGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LKPKSVEPSLRSHSSLLGSWVPT*PSMGRE
Trigger: CTCCCTCCCCATTGAAGGCCAAGTGGGAACCCAGGA...ACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp CTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTCATATCGCAGGGTGCTaGGAGTCTCAGGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: LKPKSVEPSLRSHSSLLGHIAGC*ESQEGT
Trigger: AGTGCCTTCCTGAGACTCTCAGCACCCTGCGATATG...ACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GATGCGCTGCTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTTTTCAAAGGGATGTGGCTCTaGTTCCGCTGTGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: DALLILGQVSAILQLALFKGMWL*FRCGSS
Trigger: GCTGGACCCACAGCGGAAGCAGAGCCACATCCCTTT...GAAAAGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR GCA 90 bp GCAGGGAGATGCAGTGACAGTTTGACGGCTGATGTAAAGGGTGAGCAGGGCATGTCTAGTGCATGGACCTaGTGGGCCAGGATGCGCTGC +
Preference number: 4 (lower is better)
Translates to: AGRCSDSLTADVKGEQGMSSAWT*WARMRC
Trigger: GCAGCGCATCCTGGCCCAGCAGGTCCATGCACTAGA...CATGCCCTGCTCACCCTTTACATCAGCCGTCAAACTGTCACTGCATCTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR GCA 90 bp ACTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGCTCCGTCAACATCTCTaGCAGGACTCGGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: TEAQECGAQSEVTQQSPGLRQHL*QDSGLS
Trigger: ACTCAGACCCGAGTCCTGGCAGAGATGTTGACGGAG...CCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGTGCAGGGTGGCTGGCTaGGGCCACGTCGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLCRVAG*GHVAGS
Trigger: GCTCCCTGCGACGTGGCCGCAGCCAGCCACCCTGCA...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR GCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTCCGTGCGCCCTCACTaGAGGGTGGCTGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSSVRPH*RVAGCG
Trigger: GCCGCAGCCAGCCACCCTGCAGTGAGGGCGCACGGA...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR CCA 90 bp TTTCTTTCCCTTGCAGTCCATTTGGTCCAGCTGGAACTGCAGGCGACGGTTCTCGGGCATGGCTTCGGCTaGAGGCCTGGTTCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: FLSLAVHLVQLELQATVLGHGFG*RPGSGC
Trigger: ACACCCTGAACCAGGCCTCCAGCCGAAGCCATGCCC...GAGAACCGTCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp GCAGGGAGATGCAGTGACAGTTTGACGGCTGATGTAAAGGGTGAGCAGGGCATGGCTCTGCTTCCGCTGTaGGTCCAGCAGCAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: AGRCSDSLTADVKGEQGMALLPL*VQQQGD
Trigger: ATCTCCCTGCTGCTGGACCCACAGCGGAAGCAGAGC...CATGCCCTGCTCACCCTTTACATCAGCCGTCAAACTGTCACTGCATCTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCTCTGTCTCCAAACGCTaGGGCTGCTTTGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPSVSKR*GCFATG
Trigger: TCCTGTGGCAAAGCAGCCCCAGCGTTTGGAGACAGA...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp ACTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTCCATTTGGTCCAGCTaGAACTGCAGGCGACGGTTC +
Preference number: 4 (lower is better)
Translates to: TEAQECGAQSEVTQQSPGSIWSS*NCRRRF
Trigger: GAACCGTCGCCTGCAGTTCCAGCTGGACCAAATGGA...CCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCCGTACAGGTTCCGCTaGGCCCAGGCCACCCGGGCT +
Preference number: 4 (lower is better)
Translates to: GADASLYSCISSPAAWFLPYRFR*AQATRA
Trigger: AGCCCGGGTGGCCTGGGCCCAGCGGAACCTGTACGG...GAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp ACTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGATGCGCTGCTCATTCTaGGCCAGGTCTCGGCTATTC +
Preference number: 4 (lower is better)
Translates to: TEAQECGAQSEVTQQSPGMRCSF*ARSRLF
Trigger: GAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCAT...CCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp CTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTATGCGCTGCTCATTCTaGGCCAGGTCTCGGCTATTC +
Preference number: 4 (lower is better)
Translates to: LKPKSVEPSLRSHSSLLGMRCSF*ARSRLF
Trigger: GAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCAT...ACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCGCCCTCACTGCAGGGTaGCTGGCTGCGGCCACGTCG +
Preference number: 4 (lower is better)
Translates to: GADASLYSCISSPAAWFLALTAG*LAAATS
Trigger: CGACGTGGCCGCAGCCAGCCACCCTGCAGTGAGGGC...GAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR CCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCGCCCTCACTGCAGGGTaGCTGGCTGCGGCCACGTCG +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSALTAG*LAAATS
Trigger: CGACGTGGCCGCAGCCAGCCACCCTGCAGTGAGGGC...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR CCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGGGGAGGGAGGACTTaGCCTGGGCTCCGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSWGGRT*PGLRAP
Trigger: GGGCGCACGGAGCCCAGGCCAAGTCCTCCCTCCCCA...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR CCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGTGGGGAGGGAGGACTTaGCCTGGGCTCCGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLWGGRT*PGLRAP
Trigger: GGGCGCACGGAGCCCAGGCCAAGTCCTCCCTCCCCA...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR TCA 90 bp CTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTCCGTCTGGCCAAAGGTaGAAACAGTGCAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: LKPKSVEPSLRSHSSLLGPSGQR*KQCRRN
Trigger: GTTTCTCCTGCACTGTTTTCACCTTTGGCCAGACGG...ACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp GGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCCTGTGGTCGGGTGGTaGCCCGCTGAGCTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: GADASLYSCISSPAAWFLPVVGW*PAELGL
Trigger: CAAGCCGAGCTCAGCGGGTCACCACCCGACCACAGG...GAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp AGATGCAGTGACAGTTTGACGGCTGATGTAAAGGGTGAGCAGGGCATGGCTTCGCCGCTGAGCTCGGCTTaGATATCGCAGGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RCSDSLTADVKGEQGMASPLSSA*ISQGAE
Trigger: CTCAGCACCCTGCGATATGCAAGCCGAGCTCAGCGG...CGAAGCCATGCCCTGCTCACCCTTTACATCAGCCGTCAAACTGTCACTGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR GCA 90 bp GCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCATTCTCCTCCTGGAGCTaGAGCATCTCTGTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: AQECGAQSEVTQQSPGFPFSSWS*SISVSK
Trigger: TTTGGAGACAGAGATGCTGCAGCTCCAGGAGGAGAA...TGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp CTGGCTCTTTTCTTTCCCTTGCAGTCCATTTGGTCCAGCTGGAACTGCAGGCGATGGGCCAGGATGCGCTaGTCATTCTGGGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LALFFPLQSIWSSWNCRRWARMR*SFWARS
Trigger: AGACCTGGCCCAGAATGAGCAGCGCATCCTGGCCCA...TCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAAAAGAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR GCA 90 bp CAGGTCTCGGCTATTCTGCAGCTGGCTCTTTTCTTTCCCTTGCAGTCCATTTGGCCTGCTGGGCCAGGATaGGCTGCTCATTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: QVSAILQLALFFPLQSIWPAGPG*AAHSGP
Trigger: TGGCCCAGAATGAGCAGCGCATCCTGGCCCAGCAGG...CCAAATGGACTGCAAGGGAAAGAAAAGAGCCAGCTGCAGAATAGCCGAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR GCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGGGGCAGATGGGGGCCTaGCACCTGAGGCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLGQMGA*HLRPQG
Trigger: ACCCTGAGGCCTCAGGTGGCAGGCCCCCATCTGCCC...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGTTGGCCTGGGCTCCGTaGGCCCTCACTGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLLAWAP*ALTAGW
Trigger: CCACCCTGCAGTGAGGGCGCACGGAGCCCAGGCCAA...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR CCA 90 bp TGCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCTCTGTCTCCAAACGCTaGGGCTGCTTTGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: CRWSSSCCLHSADGQTEASVSKR*GCFATG
Trigger: TCCTGTGGCAAAGCAGCCCCAGCGTTTGGAGACAGA...GGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp TGCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCTCCATTTGGTCCAGCTaGAACTGCAGGCGACGGTTC +
Preference number: 4 (lower is better)
Translates to: CRWSSSCCLHSADGQTEASIWSS*NCRRRF
Trigger: GAACCGTCGCCTGCAGTTCCAGCTGGACCAAATGGA...GGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp AGGATGCGCTGCTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTTTTCCATTTGGTCCAGCTaGAACTGCAGGCGACGGTTC +
Preference number: 4 (lower is better)
Translates to: RMRCSFWARSRLFCSWLFSIWSS*NCRRRF
Trigger: GAACCGTCGCCTGCAGTTCCAGCTGGACCAAATGGA...AAAGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp TTGGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCGCCCTCACTGCAGGGTaGCTGGCTGCGGCCACGTCG +
Preference number: 4 (lower is better)
Translates to: LELMPLFIHVFHPLLPGFALTAG*LAAATS
Trigger: CGACGTGGCCGCAGCCAGCCACCCTGCAGTGAGGGC...GAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643988.1
CDS-3UTR CCA 90 bp GGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCGTTTCCGGCCCCTCTaGCCCTTGCTCCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GADASLYSCISSPAAWFLRFRPL*PLLQAP
Trigger: CGGAGCCTGGAGCAAGGGCCAGAGGGGCCGGAAACG...GAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468460.2
CDS-3UTR CCA 90 bp TGGTCCAGCTGGAACTGCAGGCGACGGTTCTCCTCCTGGAGCTGCAGCATCTCTCGGCTATTCTGCAGCTaGCTCTTTTCTTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: WSSWNCRRRFSSWSCSISRLFCS*LFSFPC
Trigger: GCAAGGGAAAGAAAAGAGCCAGCTGCAGAATAGCCG...AGAGATGCTGCAGCTCCAGGAGGAGAACCGTCGCCTGCAGTTCCAGCTGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR TCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCCAGAGTCCGGGTCCCTaGGCAGTGCAGCACGCTCTG +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSQSPGP*AVQHAL
Trigger: CAGAGCGTGCTGCACTGCTCAGGGACCCGGACTCTG...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAAGAGGCGCGAAGGGTaGCAGGGGCACCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLKRREG*QGHPGA
Trigger: AGCACCTGGGTGCCCCTGTCACCCTTCGCGCCTCTT...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGCGGGTGGTGACCCGCTaGGCTCGGCTTGCATATCGC +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLRVVTR*ARLAYR
Trigger: GCGATATGCAAGCCGAGCTCAGCGGGTCACCACCCG...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp AGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTTGGCCTCTCATTCTCTAGCATaGACTCCTGTAGCATCCCGT +
Preference number: 4 (lower is better)
Translates to: SVEPSLRSHSSLLGSHLASHSLA*TPVASR
Trigger: ACGGGATGCTACAGGAGTTCATGCTAGAGAATGAGA...GGCCAAGTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGCAGTGCAGCACGCTCTaGTGCCCTCGACGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLQCSTL*CPRRSS
Trigger: CGAGCTGCGTCGAGGGCAGCAGAGCGTGCTGCACTG...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGACAGGGGCACCCAGGTaGTGCACGCGGTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLTGAPR*CTRSNS
Trigger: GCTGTTGGACCGCGTGCAGCACCTGGGTGCCCCTGT...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp CCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTATTTCATCCCCTGCTaGCTGGTTTCTCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: PKSVEPSLRSHSSLLGSHYFIPC*LVSPES
Trigger: GGATTCAGGAGAAACCAGGCAGCAGGGGATGAAATA...GTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCAGGGTGAGCAGGGCATaGCTTCGGCTGGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSRVSRA*LRLEAW
Trigger: CCAGGCCTCCAGCCGAAGCCATGCCCTGCTCACCCT...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp CAGGTCTCGGCTATTCTGCAGCTGGCTCTTTTCTTTCCCTTGCAGTCCATTTGGTCCCGGAAAGGGATGTaGCTCTGCTTCCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QVSAILQLALFFPLQSIWSRKGM*LCFRCG
Trigger: CCCACAGCGGAAGCAGAGCCACATCCCTTTCCGGGA...CCAAATGGACTGCAAGGGAAAGAAAAGAGCCAGCTGCAGAATAGCCGAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAACACCTGGGGCAGGTaGTGCTCCCCTGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLNTWGR*CSPGRQ
Trigger: CTGCCTGCCAGGGGAGCACCACCTGCCCCAGGTGTT...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAGGGAGGACTTGGCCTaGGCTCCGTGCGCCCTCACT +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLREDLA*APCALT
Trigger: AGTGAGGGCGCACGGAGCCCAGGCCAAGTCCTCCCT...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR CCA 90 bp GATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAATTGGGGAGGGAGGACTTaGCCTGGGCTCCGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: DASLYSCISSPAAWFLLNWGGRT*PGLRAP
Trigger: GGGCGCACGGAGCCCAGGCCAAGTCCTCCCTCCCCA...ATTCAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR CCA 90 bp GGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCACCCTGAGCACCACCTaGATGGGCGTTTCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: GADASLYSCISSPAAWFLTLSTT*MGVSGP
Trigger: GGGGCCGGAAACGCCCATCCAGGTGGTGCTCAGGGT...GAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468460.2
CDS-3UTR TCA 90 bp ACTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTCTCATTCTCTAGCATaGACTCCTGTAGCATCCCGT +
Preference number: 4 (lower is better)
Translates to: TEAQECGAQSEVTQQSPGSHSLA*TPVASR
Trigger: ACGGGATGCTACAGGAGTTCATGCTAGAGAATGAGA...CCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGACGCTGGGGCTGCTTTaGCACAGGAGACTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLTLGLL*HRRLGG
Trigger: GCCCCCAAGTCTCCTGTGGCAAAGCAGCCCCAGCGT...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCACGCTGGGGCTGCTTTaGCACAGGAGACTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GADASLYSCISSPAAWFLTLGLL*HRRLGG
Trigger: GCCCCCAAGTCTCCTGTGGCAAAGCAGCCCCAGCGT...GAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp ACTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGAGGTCTCGGCTATTCTaGAGCTGGCTCTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: TEAQECGAQSEVTQQSPGRSRLF*SWLFSF
Trigger: GAAAGAAAAGAGCCAGCTGCAGAATAGCCGAGACCT...CCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCCCTGCTGGGCCAGGATaGGCTGCTCATTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSPAGPG*AAHSGP
Trigger: TGGCCCAGAATGAGCAGCGCATCCTGGCCCAGCAGG...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCGTAGAGGGGTGGCAGTaGATGGCAAGGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GADASLYSCISSPAAWFLVEGWQ*MARGSW
Trigger: CCAGCTCCCCCTTGCCATGCACTGCCACCCCTCTAC...GAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp TGCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCAGGTGGAGTAGCAGCTaGTGTCTCCATTCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: CRWSSSCCLHSADGQTEARWSSS*CLHSAD
Trigger: ATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCT...GGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR CCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCCTTCGGCTGGAGGCCTaGTTCAGGGTGTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSLRLEA*FRVWAE
Trigger: CTCAGCCCACACCCTGAACCAGGCCTCCAGCCGAAG...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCGGGCATGGCTTCGGCTaGAGGCCTGGTTCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSGHGFG*RPGSGC
Trigger: ACACCCTGAACCAGGCCTCCAGCCGAAGCCATGCCC...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCGTCTCAGGAAGGCACTaGGCTGAGGGGGACACGCAG +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSVSGRH*AEGDTQ
Trigger: CTGCGTGTCCCCCTCAGCCCAGTGCCTTCCTGAGAC...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGGTCTCAGGAAGGCACTaGGCTGAGGGGGACACGCAG +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLVSGRH*AEGDTQ
Trigger: CTGCGTGTCCCCCTCAGCCCAGTGCCTTCCTGAGAC...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGGGGCACTCGACACAGTaGGCAGATGTGGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLGHSTQ*ADVAAG
Trigger: CCCTGCTGCCACATCTGCCCACTGTGTCGAGTGCCC...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGTCAGGGTCCAACACCTaGGGCAGGTGGTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLSGSNT*GRWCSP
Trigger: AGGGGAGCACCACCTGCCCCAGGTGTTGGACCCTGA...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCTCAGGGTCCAACACCTaGGGCAGGTGGTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GADASLYSCISSPAAWFLSGSNT*GRWCSP
Trigger: AGGGGAGCACCACCTGCCCCAGGTGTTGGACCCTGA...GAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCAGGGCCTCCAGTCTCTaGGCCAGGTTTGGAACCCCG +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSRASSL*ARFGTP
Trigger: CGGGGTTCCAAACCTGGCCCAGAGACTGGAGGCCCT...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR CCA 90 bp GATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAATTCACTGCAGGGTGGCTaGCTGCGGCCACGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: DASLYSCISSPAAWFLLNSLQGG*LRPRRR
Trigger: CCTGCGACGTGGCCGCAGCCAGCCACCCTGCAGTGA...ATTCAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR CCA 90 bp CTTTTCTTTCCCTTGCAGTCCATTTGGTCCAGCTGGAACTGCAGGCGACGGTTCCCCTTGCAGTCCATTTaGTCCAGCTGGAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: LFFPLQSIWSSWNCRRRFPLQSI*SSWNCR
Trigger: CCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGG...GAACCGTCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR TCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGCCAATCTGGTCTCTaGGGGCCTCCAGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSCQSGL*GPPVSG
Trigger: CCCAGAGACTGGAGGCCCTCAGAGACCAGATTGGCA...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR TCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGGTGTGGAGCCCAGTCTaGGGTCACACAGCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLVWSPV*GHTAVS
Trigger: GGAGACTGCTGTGTGACCTCAGACTGGGCTCCACAC...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR GCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGACGGGATCCCGTGGCTaGTACCTTCTCACTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLTGSRG*YLLTAC
Trigger: GCAGGCAGTGAGAAGGTAGCAGCCACGGGATCCCGT...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCCGCTGAGCTCGGCTTaGATATCGCAGGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GADASLYSCISSPAAWFLPLSSA*ISQGAE
Trigger: CTCAGCACCCTGCGATATGCAAGCCGAGCTCAGCGG...GAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCTGGTCCAGCTGGAACTaGAGGCGACGGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GADASLYSCISSPAAWFLWSSWN*RRRFSS
Trigger: GGAGGAGAACCGTCGCCTGCAGTTCCAGCTGGACCA...GAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGTGGTCCAGCTGGAACTaGAGGCGACGGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLWSSWN*RRRFSS
Trigger: GGAGGAGAACCGTCGCCTGCAGTTCCAGCTGGACCA...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGGGCCAGGATGCGCTaGTCATTCTGGGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSWARMR*SFWARS
Trigger: AGACCTGGCCCAGAATGAGCAGCGCATCCTGGCCCA...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTCTAGTGCATGGACCTaGTGGGCCAGGATGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSSSAWT*WARMRC
Trigger: GCAGCGCATCCTGGCCCAGCAGGTCCATGCACTAGA...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCATGGCAAGGGGGAGCTaGGGCCATCAAGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GADASLYSCISSPAAWFLMARGS*GHQAGT
Trigger: TGTCCCTGCTTGATGGCCCCAGCTCCCCCTTGCCAT...GAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAATCCCCGGCCCCACATCTaGGCACGCAGATGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: DASLYSCISSPAAWFLLNPRPHI*ARRCSS
Trigger: AGAGGAGCATCTGCGTGCCCAGATGTGGGGCCGGGG...ATTCAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643988.1
CDS-3UTR TCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGCTGCCAGCAACTTGGTaGGCTTGCTGTCCCGGAAAG +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLLPATW*ACCPGK
Trigger: CTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAG...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp GGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGCCAGCAACTTGGTaGGCTTGCTGTCCCGGAAAG +
Preference number: 4 (lower is better)
Translates to: GADASLYSCISSPAAWFLLPATW*ACCPGK
Trigger: CTTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAG...GAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCAGCAGATGGGCAGACTaGAGCCCAAGAGTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSSRWAD*SPRVWS
Trigger: GCTCCACACTCTTGGGCTTCAGTCTGCCCATCTGCT...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR TCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAGCAGATGGGCAGACTaGAGCCCAAGAGTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLSRWAD*SPRVWS
Trigger: GCTCCACACTCTTGGGCTTCAGTCTGCCCATCTGCT...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR TCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGACGCAGATGCTCCTCTaGGCCCTGGTGATGTCTTCG +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLTQMLL*ALVMSS
Trigger: CGAAGACATCACCAGGGCTCAGAGGAGCATCTGCGT...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643988.1
CDS-3UTR GCA 90 bp GATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAATCCAGCAGCAGGGAGATaGAGTGACCCAGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: DASLYSCISSPAAWFLLNPAAGR*SDPGPA
Trigger: TGCTGGCCCTGGGTCACTGCATCTCCCTGCTGCTGG...ATTCAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCAAAGGGATGTGGCTCTaGTTCCGCTGTGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSKGMWL*FRCGSS
Trigger: GCTGGACCCACAGCGGAAGCAGAGCCACATCCCTTT...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp AGATGCAGTGACAGTTTGACGGCTGATGTAAAGGGTGAGCAGGGCATGGCTTCGTTCTCCTCCTGGAGCTaGAGCATCTCTGTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: RCSDSLTADVKGEQGMASFSSWS*SISVSK
Trigger: TTTGGAGACAGAGATGCTGCAGCTCCAGGAGGAGAA...CGAAGCCATGCCCTGCTCACCCTTTACATCAGCCGTCAAACTGTCACTGCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp GATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAATCCCCACGGGATCCCGTaGCTGCTACCTTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: DASLYSCISSPAAWFLLNPHGIP*LLPSHC
Trigger: GCAGTGAGAAGGTAGCAGCCACGGGATCCCGTGGGG...ATTCAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCAGGGAGCTGCCAATCTaGTCTCTGAGGGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GADASLYSCISSPAAWFLRELPI*SLRASS
Trigger: ACTGGAGGCCCTCAGAGACCAGATTGGCAGCTCCCT...GAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR GCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCCGGCTGAGACCCGTTTaGAAAAGTTCCATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSRLRPV*KSSIRA
Trigger: GGCCCTGATGGAACTTTTGCAAACGGGTCTCAGCCG...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGCGGCTGAGACCCGTTTaGAAAAGTTCCATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLRLRPV*KSSIRA
Trigger: GGCCCTGATGGAACTTTTGCAAACGGGTCTCAGCCG...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GCTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTTTTCTTTCCCTTAGGTCTCGGCTATTCTaGAGCTGGCTCTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: AHSGPGLGYSAAGSFLSLRSRLF*SWLFSF
Trigger: GAAAGAAAAGAGCCAGCTGCAGAATAGCCGAGACCT...AAGGGAAAGAAAAGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR GCA 90 bp GCAGGGAGATGCAGTGACAGTTTGACGGCTGATGTAAAGGGTGAGCAGGGCATGCTCTTTTCTTTCCCTTaGAGTCCATTTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AGRCSDSLTADVKGEQGMLFSFP*SPFGPA
Trigger: AGCTGGACCAAATGGACTGCAAGGGAAAGAAAAGAG...CATGCCCTGCTCACCCTTTACATCAGCCGTCAAACTGTCACTGCATCTCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CCA 90 bp GATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAATTCCCGGAAAGGGATGTaGCTCTGCTTCCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: DASLYSCISSPAAWFLLNSRKGM*LCFRCG
Trigger: CCCACAGCGGAAGCAGAGCCACATCCCTTTCCGGGA...ATTCAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGGCCTTGCAGTCCATTTaGTCCAGCTGGAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLALQSI*SSWNCR
Trigger: CCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGC...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAATAGTGCATGGACCTGCTaGGCCAGGATGCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: DASLYSCISSPAAWFLLNSAWTC*ARMRCS
Trigger: TGAGCAGCGCATCCTGGCCCAGCAGGTCCATGCACT...ATTCAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAATATGGCAAGGGGGAGCTaGGGCCATCAAGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: DASLYSCISSPAAWFLLNMARGS*GHQAGT
Trigger: TGTCCCTGCTTGATGGCCCCAGCTCCCCCTTGCCAT...ATTCAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp TTGGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGGGTTCCCACTTaGCCTTCAATGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LELMPLFIHVFHPLLPGFSWVPT*PSMGRE
Trigger: CTCCCTCCCCATTGAAGGCCAAGTGGGAACCCAGGA...GAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643988.1
CDS-3UTR TCA 90 bp GGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCCGTCTGGCCAAAGGTaGAAACAGTGCAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GADASLYSCISSPAAWFLPSGQR*KQCRRN
Trigger: GTTTCTCCTGCACTGTTTTCACCTTTGGCCAGACGG...GAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR TCA 90 bp GATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAATAGCAGATGGGCAGACTaGAGCCCAAGAGTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: DASLYSCISSPAAWFLLNSRWAD*SPRVWS
Trigger: GCTCCACACTCTTGGGCTTCAGTCTGCCCATCTGCT...ATTCAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR GCA 90 bp TTGGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCCTCCGTCAACATCTCTaGCAGGACTCGGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LELMPLFIHVFHPLLPGFLRQHL*QDSGLS
Trigger: ACTCAGACCCGAGTCCTGGCAGAGATGTTGACGGAG...GAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643988.1
CDS-3UTR CCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGTTCCCAGAGCCCGTCTaGCCAAAGGTGAAAACAGTG +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLFPEPV*PKVKTV
Trigger: CACTGTTTTCACCTTTGGCCAGACGGGCTCTGGGAA...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR GCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTTCTCCTCCTGGAGCTaGAGCATCTCTGTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSFSSWS*SISVSK
Trigger: TTTGGAGACAGAGATGCTGCAGCTCCAGGAGGAGAA...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCCGACAGAAGGGCAGATaGTACATCCTGATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSRQKGR*YILMSS
Trigger: GGAAGACATCAGGATGTACCATCTGCCCTTCTGTCG...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374118.8
CDS-3UTR GCA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGTATTTCATCCCCTGCTaGCTGGTTTCTCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: ADASLYSCISSPAAWFLLYFIPC*LVSPES
Trigger: GGATTCAGGAGAAACCAGGCAGCAGGGGATGAAATA...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR GCA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTATTTCATCCCCTGCTaGCTGGTTTCTCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSYFIPC*LVSPES
Trigger: GGATTCAGGAGAAACCAGGCAGCAGGGGATGAAATA...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000643988.1
CDS-3UTR GCA 90 bp GATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAATAGGTCTCGGCTATTCTaGAGCTGGCTCTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: DASLYSCISSPAAWFLLNRSRLF*SWLFSF
Trigger: GAAAGAAAAGAGCCAGCTGCAGAATAGCCGAGACCT...ATTCAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS GCA 90 bp CCCCCAGGCGCCGCACGCCGCACGCCCGGAACACGTCCTCCTGCGTaGGCGCCGCGTCTAGCACCGCACCGAAGCGGAACGCCACTTCTG +
Preference number: 5 (lower is better)
Translates to: PPGAARRTPGTRPPA*APRLAPHRSGTPLL
Trigger: CAGAAGTGGCGTTCCGCTTCGGTGCGGTGCTAGACGCGGCGCGCACGCAGGAGGACGTGTTCCGGGCGTGCGGCGTGCGGCGCCTGGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
CDS GCA 90 bp AGCTCCCCCAGGCGCCGCACGCCGCACGCCCGGAACACGTCCTCCTaGGTGCGCGCCGCGTCTAGCACCGCACCGAAGCGGAACGCCACT +
Preference number: 5 (lower is better)
Translates to: SSPRRRTPHARNTSS*VRAASSTAPKRNAT
Trigger: AGTGGCGTTCCGCTTCGGTGCGGTGCTAGACGCGGCGCGCACGCAGGAGGACGTGTTCCGGGCGTGCGGCGTGCGGCGCCTGGGGGAGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
CDS GCA 90 bp CCCCCGCCTGGAGGACTCACCTGCAGAGTCCGGGTCCCTGAGCAGTaGAGCACGCTCTGCTGCCCTCGACGCAGCTCGGCCGCGCTCATG +
Preference number: 5 (lower is better)
Translates to: PPPGGLTCRVRVPEQ*STLCCPRRSSAALM
Trigger: CATGAGCGCGGCCGAGCTGCGTCGAGGGCAGCAGAGCGTGCTGCACTGCTCAGGGACCCGGACTCTGCAGGTGAGTCCTCCAGGCGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000639832.1
ENST00000640217.2
CDS GCA 90 bp ACCCTGAGCACCACCTGGATGGGCGTTTCCGGCCCCTCTGGCCCTTaGTCCAGGCTCCGCGCGAGATCCCCGTCGGGTGACCCGCGTTCT +
Preference number: 5 (lower is better)
Translates to: TLSTTWMGVSGPSGP*SRLRARSPSGDPRS
Trigger: AGAACGCGGGTCACCCGACGGGGATCTCGCGCGGAGCCTGGAGCAAGGGCCAGAGGGGCCGGAAACGCCCATCCAGGTGGTGCTCAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468460.2
ENST00000640217.2
CDS CCA 90 bp GGGAGGACTTGGCCTGGGCTCCGTGCGCCCTCACTGCAGGGTGGCTaGCTGCGGCCACGTCGCAGGGAGCTGCCAATCTGGTCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: GRTWPGLRAPSLQGG*LRPRRRELPIWSLR
Trigger: CCTCAGAGACCAGATTGGCAGCTCCCTGCGACGTGGCCGCAGCCAGCCACCCTGCAGTGAGGGCGCACGGAGCCCAGGCCAAGTCCTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
ENST00000643988.1
CDS CCA 90 bp GGGAGGGAGGACTTGGCCTGGGCTCCGTGCGCCCTCACTGCAGGGTaGCTGGCTGCGGCCACGTCGCAGGGAGCTGCCAATCTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: GREDLAWAPCALTAG*LAAATSQGAANLVS
Trigger: AGAGACCAGATTGGCAGCTCCCTGCGACGTGGCCGCAGCCAGCCACCCTGCAGTGAGGGCGCACGGAGCCCAGGCCAAGTCCTCCCTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
ENST00000643988.1
CDS GCA 90 bp CTCACCTGCAGAGTCCGGGTCCCTGAGCAGTGCAGCACGCTCTGCTaGCCTCGACGCAGCTCGGCCGCGCTCATGGGACGTACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: LTCRVRVPEQCSTLC*PRRSSAALMGRTLS
Trigger: GCTCAGGGTACGTCCCATGAGCGCGGCCGAGCTGCGTCGAGGGCAGCAGAGCGTGCTGCACTGCTCAGGGACCCGGACTCTGCAGGTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639832.1
ENST00000640217.2
CDS GCA 90 bp GGACTCACCTGCAGAGTCCGGGTCCCTGAGCAGTGCAGCACGCTCTaGTGCCCTCGACGCAGCTCGGCCGCGCTCATGGGACGTACCCTG +
Preference number: 5 (lower is better)
Translates to: GLTCRVRVPEQCSTL*CPRRSSAALMGRTL
Trigger: CAGGGTACGTCCCATGAGCGCGGCCGAGCTGCGTCGAGGGCAGCAGAGCGTGCTGCACTGCTCAGGGACCCGGACTCTGCAGGTGAGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639832.1
ENST00000640217.2
CDS GCA 90 bp AGAAACTGCAGAGTCCGGGTCCCTGAGCAGTGCAGCACGCTCTGCTaGCCTCGACGCAGCTCGGCCGCGCTCATGGGACGTACCCTGGGG +
Preference number: 5 (lower is better)
Translates to: RNCRVRVPEQCSTLC*PRRSSAALMGRTLG
Trigger: CCCCAGGGTACGTCCCATGAGCGCGGCCGAGCTGCGTCGAGGGCAGCAGAGCGTGCTGCACTGCTCAGGGACCCGGACTCTGCAGTTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000640553.1
CDS GCA 90 bp TTCAATGGGGAGGGAGGACTTGGCCTGGGCTCCGTGCGCCCTCACTaGAGGGTGGCTGGCTGCGGCCACGTCGCAGGGAGCTGCCAATCT +
Preference number: 5 (lower is better)
Translates to: FNGEGGLGLGSVRPH*RVAGCGHVAGSCQS
Trigger: AGATTGGCAGCTCCCTGCGACGTGGCCGCAGCCAGCCACCCTGCAGTGAGGGCGCACGGAGCCCAGGCCAAGTCCTCCCTCCCCATTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
ENST00000643988.1
CDS CCA 90 bp CTGCAGGGTGGCTGGCTGCGGCCACGTCGCAGGGAGCTGCCAATCTaGTCTCTGAGGGCCTCCAGTCTCTGGGCCAGGTTTGGAACCCCG +
Preference number: 5 (lower is better)
Translates to: LQGGWLRPRRRELPI*SLRASSLWARFGTP
Trigger: CGGGGTTCCAAACCTGGCCCAGAGACTGGAGGCCCTCAGAGACCAGATTGGCAGCTCCCTGCGACGTGGCCGCAGCCAGCCACCCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
ENST00000643988.1
CDS CCA 90 bp GGGACGTACCCTGAGCACCACCTGGATGGGCGTTTCCGGCCCCTCTaGCCCTTGCTCCAGGCTCCGCGCGAGATCCCTGTGGGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: GTYPEHHLDGRFRPL*PLLQAPREIPVGSN
Trigger: ATTGCTGCCCACAGGGATCTCGCGCGGAGCCTGGAGCAAGGGCCAGAGGGGCCGGAAACGCCCATCCAGGTGGTGCTCAGGGTACGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639832.1
CDS GCA 90 bp AGGAGAAACTGCAGAGTCCGGGTCCCTGAGCAGTGCAGCACGCTCTaGTGCCCTCGACGCAGCTCGGCCGCGCTCATGGGACGTACCCTG +
Preference number: 5 (lower is better)
Translates to: RRNCRVRVPEQCSTL*CPRRSSAALMGRTL
Trigger: CAGGGTACGTCCCATGAGCGCGGCCGAGCTGCGTCGAGGGCAGCAGAGCGTGCTGCACTGCTCAGGGACCCGGACTCTGCAGTTTCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000640553.1
CDS GCA 90 bp ACCCTGAGCACCACCTGGATGGGCGTTTCCGGCCCCTCTGGCCCTTaGTCCAGGCTCCGCGCGAGATCCCTGTGGGCAGCAATGCGACTT +
Preference number: 5 (lower is better)
Translates to: TLSTTWMGVSGPSGP*SRLRARSLWAAMRL
Trigger: AAGTCGCATTGCTGCCCACAGGGATCTCGCGCGGAGCCTGGAGCAAGGGCCAGAGGGGCCGGAAACGCCCATCCAGGTGGTGCTCAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639832.1
CDS CCA 90 bp AGTGCAGCACGCTCTGCTGCCCTCGACGCAGCTCGGCCGCGCTCATaGGACGTACCCTGGGGTCCGACAGAAGGGCAGATGGTACATCCT +
Preference number: 5 (lower is better)
Translates to: SAARSAALDAARPRS*DVPWGPTEGQMVHP
Trigger: AGGATGTACCATCTGCCCTTCTGTCGGACCCCAGGGTACGTCCCATGAGCGCGGCCGAGCTGCGTCGAGGGCAGCAGAGCGTGCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000640553.1
CDS CCA 90 bp CGTCGCAGGGAGCTGCCAATCTGGTCTCTGAGGGCCTCCAGTCTCTaGGCCAGGTTTGGAACCCCGGCCCCACATCTGGGCACGCAGATG +
Preference number: 5 (lower is better)
Translates to: RRRELPIWSLRASSL*ARFGTPAPHLGTQM
Trigger: CATCTGCGTGCCCAGATGTGGGGCCGGGGTTCCAAACCTGGCCCAGAGACTGGAGGCCCTCAGAGACCAGATTGGCAGCTCCCTGCGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643988.1
CDS-3UTR CAA 90 bp CTTTGCCACAGGAGACTTGGGGGCCTGTGGTCGGGTGGTGACCCGCTGAGCTCGTTTGCCACAGGAGACTaGGGGGCCTGTGGTCGGGTG +
Preference number: 5 (lower is better)
Translates to: LCHRRLGGLWSGGDPLSSFATGD*GACGRV
Trigger: CACCCGACCACAGGCCCCCAAGTCTCCTGTGGCAAA...CGAGCTCAGCGGGTCACCACCCGACCACAGGCCCCCAAGTCTCCTGTGGCAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS CCA 90 bp GGTGAGCTTGCTGTCCCGGAAAGGGATGTGGCTCTGCTTCCGCTGTaGGTCCAGCAGCAGGGAGATGCAGTGACCCAGGGCCAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: GELAVPERDVALLPL*VQQQGDAVTQGQQA
Trigger: AGCCTGCTGGCCCTGGGTCACTGCATCTCCCTGCTGCTGGACCCACAGCGGAAGCAGAGCCACATCCCTTTCCGGGACAGCAAGCTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
CDS CCA 90 bp ACTCACATGGCAAGGGGGAGCTGGGGCCATCAAGCAGGGACACGGTaGGGTCAGGCCAGGACCCTGCTGGTGATGGTAGCAGGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: THMARGSWGHQAGTR*GQARTLLVMVAGRE
Trigger: CTCTCTGCCTGCTACCATCACCAGCAGGGTCCTGGCCTGACCCCACCGTGTCCCTGCTTGATGGCCCCAGCTCCCCCTTGCCATGTGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498016.1
CDS CCA 90 bp GCTGCCAATCTGGTCTCTGAGGGCCTCCAGTCTCTGGGCCAGGTTTaGAACCCCGGCCCCACATCTGGGCACGCAGATGCTCCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: AANLVSEGLQSLGQV*NPGPTSGHADAPLS
Trigger: GCTCAGAGGAGCATCTGCGTGCCCAGATGTGGGGCCGGGGTTCCAAACCTGGCCCAGAGACTGGAGGCCCTCAGAGACCAGATTGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643988.1
CDS-3UTR CAA 90 bp CCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACGTCTCTGGGCCAGGTTaGGAACCCCGGCCCCACCTC +
Preference number: 5 (lower is better)
Translates to: PKSVEPSLRSHSSLLGSHVSGPG*EPRPHL
Trigger: GAGGTGGGGCCGGGGTTCCAAACCTGGCCCAGAGAC...GTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS CCA 90 bp TCATTCTCTAGCATGAACTCCTGTAGCATCCCGTACAGGTTCCGCTaGGCCCAGGCCACCCGGGCTCCACTGAGCCCTGAGGCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: SFSSMNSCSIPYRFR*AQATRAPLSPEALQ
Trigger: CTGCAAGGCCTCAGGGCTCAGTGGAGCCCGGGTGGCCTGGGCCCAGCGGAACCTGTACGGGATGCTACAGGAGTTCATGCTAGAGAATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
CDS-3UTR CAA 90 bp CTTTGCCACAGGAGACTTGGGGGCCTGTGGTCGGGTGGTGACCCGCTGAGCTCGTCCCTTGCAGTCCATTaGGTCCAGCTGGAACTGCAG +
Preference number: 5 (lower is better)
Translates to: LCHRRLGGLWSGGDPLSSSLAVH*VQLELQ
Trigger: CTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGA...CGAGCTCAGCGGGTCACCACCCGACCACAGGCCCCCAAGTCTCCTGTGGCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS CCA 90 bp AGGGTGAGCAGGGCATGGCTTCGGCTGGAGGCCTGGTTCAGGGTGTaGGCTGAGTTCCTTCGACGGCTGAGACCCGTTTGCAAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: RVSRAWLRLEAWFRV*AEFLRRLRPVCKSS
Trigger: GGAACTTTTGCAAACGGGTCTCAGCCGTCGAAGGAACTCAGCCCACACCCTGAACCAGGCCTCCAGCCGAAGCCATGCCCTGCTCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
CDS-3UTR CAA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCTTTGCCACAGGAGACTaGGGGGCCTGTGGTCGGGTG +
Preference number: 5 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPFATGD*GACGRV
Trigger: CACCCGACCACAGGCCCCCAAGTCTCCTGTGGCAAA...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CAA 90 bp AGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTTGGCCCTGAGCCCTGAGGCCTaGCAGTCCATTTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SVEPSLRSHSSLLGSHLALSPEA*QSIWSS
Trigger: GCTGGACCAAATGGACTGCAAGGCCTCAGGGCTCAG...GGCCAAGTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CAA 90 bp GCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTCTCTCTTGGGCACTaGGCAGAGCCAGGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: AQECGAQSEVTQQSPGFPLSLGH*AEPGLH
Trigger: ATGCAGCCCTGGCTCTGCCAAGTGCCCAAGAGAGAG...TGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CAA 90 bp CCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACCTCTCTCTTGGGCACTaGGCAGAGCCAGGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: PKSVEPSLRSHSSLLGSHLSLGH*AEPGLH
Trigger: ATGCAGCCCTGGCTCTGCCAAGTGCCCAAGAGAGAG...GTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS TCA 90 bp GAGCAGGGCATGGCTTCGGCTGGAGGCCTGGTTCAGGGTGTGGGCTaGGTTCCTTCGACGGCTGAGACCCGTTTGCAAAAGTTCCATCAG +
Preference number: 5 (lower is better)
Translates to: EQGMASAGGLVQGVG*VPSTAETRLQKFHQ
Trigger: CTGATGGAACTTTTGCAAACGGGTCTCAGCCGTCGAAGGAACTCAGCCCACACCCTGAACCAGGCCTCCAGCCGAAGCCATGCCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
CDS CCA 90 bp AGGGTGAGCAGGGCATGGCTTCGGCTGGAGGCCTGGTTCAGGGTGTaGGCTGAGTTCCTTCGACGGCTGAGACCTGCTCATTGTAGATCT +
Preference number: 5 (lower is better)
Translates to: RVSRAWLRLEAWFRV*AEFLRRLRPAHCRS
Trigger: AGATCTACAATGAGCAGGTCTCAGCCGTCGAAGGAACTCAGCCCACACCCTGAACCAGGCCTCCAGCCGAAGCCATGCCCTGCTCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CAA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCGAGTCTGCCAGCAACTaGGTGAGCTTGCTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPESASN*VSLLSR
Trigger: CCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTC...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CAA 90 bp ACTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGCTGAGCCCTGAGGCCTaGCAGTCCATTTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: TEAQECGAQSEVTQQSPGLSPEA*QSIWSS
Trigger: GCTGGACCAAATGGACTGCAAGGCCTCAGGGCTCAG...CCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CAA 90 bp CCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTGTGACTCCTCTCTCTaGGGCACTTGGCAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: PKSVEPSLRSHSSLLGSHCDSSL*GTWQSQ
Trigger: CTGGCTCTGCCAAGTGCCCAAGAGAGAGGAGTCACA...GTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CAA 90 bp AGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACTTGGCCTGTGACTCCTCTCTCTaGGGCACTTGGCAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: SVEPSLRSHSSLLGSHLACDSSL*GTWQSQ
Trigger: CTGGCTCTGCCAAGTGCCCAAGAGAGAGGAGTCACA...GGCCAAGTGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CAA 90 bp GCAGGTGGAGTAGCAGCTGCTGTCTCCATTCAGCAGATGGGCAGACTGAAGCCCGCCAGCAGGCTTCGGTaGATGCTGTTAGCCTCAAGC +
Preference number: 5 (lower is better)
Translates to: AGGVAAAVSIQQMGRLKPASRLR*MLLASS
Trigger: GCTTGAGGCTAACAGCATCAACCGAAGCCTGCTGGC...GGGCTTCAGTCTGCCCATCTGCTGAATGGAGACAGCAGCTGCTACTCCACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS CCA 90 bp CTCTCTAGTGCATGGACCTGCTGGGCCAGGATGCGCTGCTCATTCTaGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTTTTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LSSAWTCWARMRCSF*ARSRLFCSWLFSFL
Trigger: CAGGAAAGAAAAGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATCCTGGCCCAGCAGGTCCATGCACTAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
CDS-3UTR CAA 90 bp GCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTTCCCACATCTGCTGGGCAGTTaGACGGCTGATGTAAAGGGT +
Preference number: 5 (lower is better)
Translates to: AQECGAQSEVTQQSPGFPHLLGS*TADVKG
Trigger: ACCCTTTACATCAGCCGTCAAACTGCCCAGCAGATG...TGGGAACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CAA 90 bp CTGGCTCTTTTCTTTCCCTTGCAGTCCATTTGGTCCAGCTGGAACTGCAGGCGAAACGCTGGGGCTGCTTaGCCACAGGAGACTTGGGGG +
Preference number: 5 (lower is better)
Translates to: LALFFPLQSIWSSWNCRRNAGAA*PQETWG
Trigger: CCCCCAAGTCTCCTGTGGCAAAGCAGCCCCAGCGTT...TCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAAAAGAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CAA 90 bp CTGAAGCCCAAGAGTGTGGAGCCCAGTCTGAGGTCACACAGCAGTCTCCTGGGTCATCTGCTGGGCAGTTaGACGGCTGATGTAAAGGGT +
Preference number: 5 (lower is better)
Translates to: LKPKSVEPSLRSHSSLLGHLLGS*TADVKG
Trigger: ACCCTTTACATCAGCCGTCAAACTGCCCAGCAGATG...ACCCAGGAGACTGCTGTGTGACCTCAGACTGGGCTCCACACTCTTGGGCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CAA 90 bp TTTCTTTCCCTTGCAGTCCATTTGGTCCAGCTGGAACTGCAGGCGACGGTTCTCGAGTCTGCCAGCAACTaGGTGAGCTTGCTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: FLSLAVHLVQLELQATVLESASN*VSLLSR
Trigger: CCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTC...GAGAACCGTCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGGAAAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CAA 90 bp GCTTGCTGTCCCGGAAAGGGATGTGGCTCTGCTTCCGCTGTGGGTCCAGCAGCAAGATGCAGTGACAGTTaGACGGCTGATGTAAAGGGT +
Preference number: 5 (lower is better)
Translates to: ACCPGKGCGSASAVGPAARCSDS*TADVKG
Trigger: ACCCTTTACATCAGCCGTCAAACTGTCACTGCATCT...TGCTGCTGGACCCACAGCGGAAGCAGAGCCACATCCCTTTCCGGGACAGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS-3UTR CAA 90 bp CCAGGATGCGCTGCTCATTCTGGGCCAGGTCTCGGCTATTCTGCAGCTGGCTCTGCTCTTTTCTTTCCCTaGCAGTCCATTTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PGCAAHSGPGLGYSAAGSALFFP*QSIWSS
Trigger: GCTGGACCAAATGGACTGCAAGGGAAAGAAAAGAGC...AGAGCCAGCTGCAGAATAGCCGAGACCTGGCCCAGAATGAGCAGCGCATCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473174.1
CDS CCA 90 bp GGCCTCAGGGTCCAACACCAAGAATGTCAGGATGGCATAAAGGGGTaGGGTCTTGGTCGCCTTCTGTGTGCAGCAGATGGTTCTTCTACC +
Preference number: 5 (lower is better)
Translates to: GLRVQHQECQDGIKG*GLGRLLCAADGSST
Trigger: GGTAGAAGAACCATCTGCTGCACACAGAAGGCGACCAAGACCCCACCCCTTTATGCCATCCTGACATTCTTGGTGTTGGACCCTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639832.1
CDS-3UTR CAA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGGTCTCTGGGCCAGGTTaGGAACCCCGGCCCCACATC +
Preference number: 5 (lower is better)
Translates to: ADASLYSCISSPAAWFLLVSGPG*EPRPHI
Trigger: GATGTGGGGCCGGGGTTCCAAACCTGGCCCAGAGAC...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643988.1
CDS CCA 90 bp CAGCAAGTCCCGAACCGCCTCTTCTGTCCTTTGATCCAGGCTCCCTaGAAAGAAGCGCTCCGTTTCCTCATGGGCTGTCTTTCTATTCCT +
Preference number: 5 (lower is better)
Translates to: QQVPNRLFCPLIQAP*KEALRFLMGCLSIP
Trigger: AGGAATAGAAAGACAGCCCATGAGGAAACGGAGCGCTTCTTTCCAGGGAGCCTGGATCAAAGGACAGAAGAGGCGGTTCGGGACTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639832.1
CDS-3UTR CAA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTTTGCCACAGGAGACTaGGGGGCCTGTGGTCGGGTG +
Preference number: 5 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSFATGD*GACGRV
Trigger: CACCCGACCACAGGCCCCCAAGTCTCCTGTGGCAAA...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CAA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCAACGCTGGGGCTGCTTaGCCACAGGAGACTTGGGGG +
Preference number: 5 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSNAGAA*PQETWG
Trigger: CCCCCAAGTCTCCTGTGGCAAAGCAGCCCCAGCGTT...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CAA 90 bp GCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAACGCTGGGGCTGCTTaGCCACAGGAGACTTGGGGG +
Preference number: 5 (lower is better)
Translates to: ADASLYSCISSPAAWFLLNAGAA*PQETWG
Trigger: CCCCCAAGTCTCCTGTGGCAAAGCAGCCCCAGCGTT...CAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CAA 90 bp GATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAATGTCTCTGGGCCAGGTTaGGAACCCCGGCCCCACCTC +
Preference number: 5 (lower is better)
Translates to: DASLYSCISSPAAWFLLNVSGPG*EPRPHL
Trigger: GAGGTGGGGCCGGGGTTCCAAACCTGGCCCAGAGAC...ATTCAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CAA 90 bp GGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCGAGTCTGCCAGCAACTaGGTGAGCTTGCTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: GADASLYSCISSPAAWFLESASN*VSLLSR
Trigger: CCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTC...GAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CAA 90 bp GAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCGGCCTTGCAGTCCATTaGGTCCAGCTGGAACTGCAG +
Preference number: 5 (lower is better)
Translates to: ELMPLFIHVFHPLLPGFSGLAVH*VQLELQ
Trigger: CTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGCC...GGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CAA 90 bp GGAGCTGATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCACGGCTGAGACCCGTTaGCAAAAGTTCCATCAGGGC +
Preference number: 5 (lower is better)
Translates to: GADASLYSCISSPAAWFLTAETR*QKFHQG
Trigger: GCCCTGATGGAACTTTTGCAAACGGGTCTCAGCCGT...GAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS-3UTR CAA 90 bp GATGCCTCTCTTTATTCATGTATTTCATCCCCTGCTGCCTGGTTTCTCCTGAATACGGCTGAGACCCGTTaGCAAAAGTTCCATCAGGGC +
Preference number: 5 (lower is better)
Translates to: DASLYSCISSPAAWFLLNTAETR*QKFHQG
Trigger: GCCCTGATGGAACTTTTGCAAACGGGTCTCAGCCGT...ATTCAGGAGAAACCAGGCAGCAGGGGATGAAATACATGAATAAAGAGAGGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000468460.2
CDS GCA 72 bp AGGCGCCGCACGCCGCACGCCCGGAACACGTCCTCCTaGGTGCGCGCCGCGTCTAGCACCGCACCGAAGCGG +
Preference number: 6 (lower is better)
Translates to: RRRTPHARNTSS*VRAASSTAPKR
Trigger: CCGCTTCGGTGCGGTGCTAGACGCGGCGCGCACGCAGGAGGACGTGTTCCGGGCGTGCGGCGTGCGGCGCCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
CDS GCA 72 bp GCCGCACGCCGCACGCCCGGAACACGTCCTCCTGCGTaGGCGCCGCGTCTAGCACCGCACCGAAGCGGAACG +
Preference number: 6 (lower is better)
Translates to: AARRTPGTRPPA*APRLAPHRSGT
Trigger: CGTTCCGCTTCGGTGCGGTGCTAGACGCGGCGCGCACGCAGGAGGACGTGTTCCGGGCGTGCGGCGTGCGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
CDS CCA 72 bp CAGTGCAGGAGAAACTGCGGGCGGCAAGGGCGTGGCTaGACTCCGGCGGCTACCCGGGGTGGGGGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: QCRRNCGRQGRG*TPAATRGGGWG
Trigger: CCCCCAGCCCCCACCCCGGGTAGCCGCCGGAGTCCAGCCACGCCCTTGCCGCCCGCAGTTTCTCCTGCACTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639832.1
CDS CCA 72 bp TGGCCTGGGCTCCGTGCGCCCTCACTGCAGGGTGGCTaGCTGCGGCCACGTCGCAGGGAGCTGCCAATCTGG +
Preference number: 6 (lower is better)
Translates to: WPGLRAPSLQGG*LRPRRRELPIW
Trigger: CCAGATTGGCAGCTCCCTGCGACGTGGCCGCAGCCAGCCACCCTGCAGTGAGGGCGCACGGAGCCCAGGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
ENST00000643988.1
CDS GCA 72 bp CTGGGCTCCGTGCGCCCTCACTGCAGGGTGGCTGGCTaGGGCCACGTCGCAGGGAGCTGCCAATCTGGTCTC +
Preference number: 6 (lower is better)
Translates to: LGSVRPHCRVAG*GHVAGSCQSGL
Trigger: GAGACCAGATTGGCAGCTCCCTGCGACGTGGCCGCAGCCAGCCACCCTGCAGTGAGGGCGCACGGAGCCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
ENST00000643988.1
CDS GCA 72 bp ACCACCTGGATGGGCGTTTCCGGCCCCTCTGGCCCTTaGTCCAGGCTCCGCGCGAGATCCCCGTCGGGTGAC +
Preference number: 6 (lower is better)
Translates to: TTWMGVSGPSGP*SRLRARSPSGD
Trigger: GTCACCCGACGGGGATCTCGCGCGGAGCCTGGAGCAAGGGCCAGAGGGGCCGGAAACGCCCATCCAGGTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468460.2
ENST00000640217.2
CDS CCA 72 bp CCTGAGCACCACCTGGATGGGCGTTTCCGGCCCCTCTaGCCCTTGCTCCAGGCTCCGCGCGAGATCCCCGTC +
Preference number: 6 (lower is better)
Translates to: PEHHLDGRFRPL*PLLQAPREIPV
Trigger: GACGGGGATCTCGCGCGGAGCCTGGAGCAAGGGCCAGAGGGGCCGGAAACGCCCATCCAGGTGGTGCTCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468460.2
ENST00000640217.2
CDS GCA 72 bp AGAGTCCGGGTCCCTGAGCAGTGCAGCACGCTCTGCTaGCCTCGACGCAGCTCGGCCGCGCTCATGGGACGT +
Preference number: 6 (lower is better)
Translates to: RVRVPEQCSTLC*PRRSSAALMGR
Trigger: ACGTCCCATGAGCGCGGCCGAGCTGCGTCGAGGGCAGCAGAGCGTGCTGCACTGCTCAGGGACCCGGACTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
CDS GCA 72 bp TGCAGAGTCCGGGTCCCTGAGCAGTGCAGCACGCTCTaGTGCCCTCGACGCAGCTCGGCCGCGCTCATGGGA +
Preference number: 6 (lower is better)
Translates to: CRVRVPEQCSTL*CPRRSSAALMG
Trigger: TCCCATGAGCGCGGCCGAGCTGCGTCGAGGGCAGCAGAGCGTGCTGCACTGCTCAGGGACCCGGACTCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
CDS GCA 72 bp GGAGGACTCACCTGCAGAGTCCGGGTCCCTGAGCAGTaGAGCACGCTCTGCTGCCCTCGACGCAGCTCGGCC +
Preference number: 6 (lower is better)
Translates to: GGLTCRVRVPEQ*STLCCPRRSSA
Trigger: GGCCGAGCTGCGTCGAGGGCAGCAGAGCGTGCTGCACTGCTCAGGGACCCGGACTCTGCAGGTGAGTCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639832.1
ENST00000640217.2
CDS GCA 72 bp ACCACCTGGATGGGCGTTTCCGGCCCCTCTGGCCCTTaGTCCAGGCTCCGCGCGAGATCCCTGTGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: TTWMGVSGPSGP*SRLRARSLWAA
Trigger: TGCTGCCCACAGGGATCTCGCGCGGAGCCTGGAGCAAGGGCCAGAGGGGCCGGAAACGCCCATCCAGGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639832.1
CDS CCA 72 bp CGCTCTGCTGCCCTCGACGCAGCTCGGCCGCGCTCATaGGACGTACCCTGGGGTCCGACAGAAGGGCAGATG +
Preference number: 6 (lower is better)
Translates to: RSAALDAARPRS*DVPWGPTEGQM
Trigger: CATCTGCCCTTCTGTCGGACCCCAGGGTACGTCCCATGAGCGCGGCCGAGCTGCGTCGAGGGCAGCAGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000640553.1
CDS CCA 72 bp CAGGCAGGCCCAGTGGGCCAGGGGCACTCGACACAGTaGGCAGATGTGGCAGCAGGGGCAGGAGTAGAGGGG +
Preference number: 6 (lower is better)
Translates to: QAGPVGQGHSTQ*ADVAAGAGVEG
Trigger: CCCCTCTACTCCTGCCCCTGCTGCCACATCTGCCCACTGTGTCGAGTGCCCCTGGCCCACTGGGCCTGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000498016.1
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
CDS CCA 72 bp CCTGAGCACCACCTGGATGGGCGTTTCCGGCCCCTCTaGCCCTTGCTCCAGGCTCCGCGCGAGATCCCTGTG +
Preference number: 6 (lower is better)
Translates to: PEHHLDGRFRPL*PLLQAPREIPV
Trigger: CACAGGGATCTCGCGCGGAGCCTGGAGCAAGGGCCAGAGGGGCCGGAAACGCCCATCCAGGTGGTGCTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639832.1
CDS CCA 72 bp GGGTTCCCACTTGGCCTTCAATGGGGAGGGAGGACTTaGCCTGGGCTCCGTGCGCCCTCACTGCAGGGTGGC +
Preference number: 6 (lower is better)
Translates to: GFPLGLQWGGRT*PGLRAPSLQGG
Trigger: GCCACCCTGCAGTGAGGGCGCACGGAGCCCAGGCCAAGTCCTCCCTCCCCATTGAAGGCCAAGTGGGAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
ENST00000643988.1
CDS CCA 72 bp AGGCTGGGCCGTGAGACTCACATGGCAAGGGGGAGCTaGGGCCATCAAGCAGGGACACGGTGGGGTCAGGCC +
Preference number: 6 (lower is better)
Translates to: RLGRETHMARGS*GHQAGTRWGQA
Trigger: GGCCTGACCCCACCGTGTCCCTGCTTGATGGCCCCAGCTCCCCCTTGCCATGTGAGTCTCACGGCCCAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498016.1
CDS GCA 72 bp TGCAGGAGAAACTGCAGAGTCCGGGTCCCTGAGCAGTaGAGCACGCTCTGCTGCCCTCGACGCAGCTCGGCC +
Preference number: 6 (lower is better)
Translates to: CRRNCRVRVPEQ*STLCCPRRSSA
Trigger: GGCCGAGCTGCGTCGAGGGCAGCAGAGCGTGCTGCACTGCTCAGGGACCCGGACTCTGCAGTTTCTCCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000640553.1
CDS TCA 72 bp CACATCTGGGCACGCAGATGCTCCTCTGAGCCCTGGTaGTGTCTTCGGGGGCCTCACAGGCAGGGGAGGTGC +
Preference number: 6 (lower is better)
Translates to: HIWARRCSSEPW*CLRGPHRQGRC
Trigger: GCACCTCCCCTGCCTGTGAGGCCCCCGAAGACATCACCAGGGCTCAGAGGAGCATCTGCGTGCCCAGATGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643988.1
CDS CCA 72 bp GCTGTCCCGGAAAGGGATGTGGCTCTGCTTCCGCTGTaGGTCCAGCAGCAGGGAGATGCAGTGACCCAGGGC +
Preference number: 6 (lower is better)
Translates to: AVPERDVALLPL*VQQQGDAVTQG
Trigger: GCCCTGGGTCACTGCATCTCCCTGCTGCTGGACCCACAGCGGAAGCAGAGCCACATCCCTTTCCGGGACAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
CDS CCA 72 bp AGCATGAACTCCTGTAGCATCCCGTACAGGTTCCGCTaGGCCCAGGCCACCCGGGCTCCACTGAGCCCTGAG +
Preference number: 6 (lower is better)
Translates to: SMNSCSIPYRFR*AQATRAPLSPE
Trigger: CTCAGGGCTCAGTGGAGCCCGGGTGGCCTGGGCCCAGCGGAACCTGTACGGGATGCTACAGGAGTTCATGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
CDS CCA 72 bp GAGCTGCCAATCTGGTCTCTGAGGGCCTCCAGTCTCTaGGCCAGGTTTGGAACCCCGGCCCCACATCTGGGC +
Preference number: 6 (lower is better)
Translates to: ELPIWSLRASSL*ARFGTPAPHLG
Trigger: GCCCAGATGTGGGGCCGGGGTTCCAAACCTGGCCCAGAGACTGGAGGCCCTCAGAGACCAGATTGGCAGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643988.1
CDS CCA 72 bp CTCGACGCAGCTCGGCCGCGCTCATGGGACGTACCCTaGGGTCCGACAGAAGGGCAGATGGTACATCCTGAT +
Preference number: 6 (lower is better)
Translates to: LDAARPRSWDVP*GPTEGQMVHPD
Trigger: ATCAGGATGTACCATCTGCCCTTCTGTCGGACCCCAGGGTACGTCCCATGAGCGCGGCCGAGCTGCGTCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000640553.1
CDS CCA 72 bp GGCTCCATGACATCCCTACTTGTCACCCCTCCAGGCTaGGCCGTGAGACTCACATGGCAAGGGGGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: GSMTSLLVTPPG*AVRLTWQGGAG
Trigger: CCCAGCTCCCCCTTGCCATGTGAGTCTCACGGCCCAGCCTGGAGGGGTGACAAGTAGGGATGTCATGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498016.1
CDS CCA 72 bp CTGAGCCCTGAGGCCTTGCAGTCCATTTGGTCCAGCTaGAACTGCAGGCGACGGTTCTCCTCCTGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: LSPEALQSIWSS*NCRRRFSSWSC
Trigger: GCAGCTCCAGGAGGAGAACCGTCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGCCTCAGGGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
CDS TCA 72 bp AAAACAGTGCAGGAGAAACTGCAGAGTCCGGGTCCCTaGGCAGTGCAGCACGCTCTGCTGCCCTCGACGCAG +
Preference number: 6 (lower is better)
Translates to: KTVQEKLQSPGP*AVQHALLPSTQ
Trigger: CTGCGTCGAGGGCAGCAGAGCGTGCTGCACTGCTCAGGGACCCGGACTCTGCAGTTTCTCCTGCACTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374118.8
ENST00000640553.1
CDS TCA 72 bp TGGCAGTGCCTGCAAAAAGGTGCGTCAGAGGCTCCATaGCATCCCTACTTGTCACCCCTCCAGGCTGGGCCG +
Preference number: 6 (lower is better)
Translates to: WQCLQKGASEAP*HPYLSPLQAGP
Trigger: CGGCCCAGCCTGGAGGGGTGACAAGTAGGGATGTCATGGAGCCTCTGACGCACCTTTTTGCAGGCACTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498016.1
CDS GCA 72 bp CCTGAGGCCTTGCAGTCCATTTGGTCCAGCTGGAACTaGAGGCGACGGTTCTCCTCCTGGAGCTGCAGCATC +
Preference number: 6 (lower is better)
Translates to: PEALQSIWSSWN*RRRFSSWSCSI
Trigger: GATGCTGCAGCTCCAGGAGGAGAACCGTCGCCTGCAGTTCCAGCTGGACCAAATGGACTGCAAGGCCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374118.8
ENST00000468460.2
ENST00000639832.1
ENST00000640217.2
ENST00000640553.1
CDS CCA 72 bp TCTGGCCCTTGCTCCAGGCTCCGCGCGAGATCCCTGTaGGCAGCAATGCGACTTATCATACCTGCACCTAGC +
Preference number: 6 (lower is better)
Translates to: SGPCSRLRARSL*AAMRLIIPAPS
Trigger: GCTAGGTGCAGGTATGATAAGTCGCATTGCTGCCCACAGGGATCTCGCGCGGAGCCTGGAGCAAGGGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639832.1
CDS TCA 72 bp TCAAAGGTCTTCTTTGCCGGCCCGTGTAGATGCCAGTaGCAGCCAGGGACTTGTCTGGGGCAGGTGGTGCTC +
Preference number: 6 (lower is better)
Translates to: SKVFFAGPCRCQ*QPGTCLGQVVL
Trigger: GAGCACCACCTGCCCCAGACAAGTCCCTGGCTGTCACTGGCATCTACACGGGCCGGCAAAGAAGACCTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498016.1
CDS GCA 72 bp GGCAGGAGTAGAGGGGTGGCAGTGCCTGCAAAAAGGTaGGTCAGAGGCTCCATGACATCCCTACTTGTCACC +
Preference number: 6 (lower is better)
Translates to: GRSRGVAVPAKR*VRGSMTSLLVT
Trigger: GGTGACAAGTAGGGATGTCATGGAGCCTCTGACGCACCTTTTTGCAGGCACTGCCACCCCTCTACTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498016.1
CDS CCA 72 bp GTCCAACACCAAGAATGTCAGGATGGCATAAAGGGGTaGGGTCTTGGTCGCCTTCTGTGTGCAGCAGATGGT +
Preference number: 6 (lower is better)
Translates to: VQHQECQDGIKG*GLGRLLCAADG
Trigger: ACCATCTGCTGCACACAGAAGGCGACCAAGACCCCACCCCTTTATGCCATCCTGACATTCTTGGTGTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639832.1