RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIDINS220 (Homo sapiens)

Ensembl gene IDs: ENSG00000134313

Ensembl transcript IDs: ENST00000256707.8, ENST00000319688.5, ENST00000459813.1, ENST00000471275.1, ENST00000473731.5, ENST00000474782.1, ENST00000488729.5, ENST00000489024.5, ENST00000496383.5, ENST00000496725.1, ENST00000569008.2, ENST00000638224.1

Found 1160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCTCGTTGTGGGAAGCGCGGCGAGCAGGCTCACCGTGCGGGGCTaGGCCACTGCTGCTCTCACTGAGGAAACGTGGGTCTTCAGGGAC +
Preference number: 1 (lower is better)
Translates to: QLVVGSAASRLTVRG*ATAALTEETWVFRD
Trigger: GTCCCTGAAGACCCACGTTTCCTCAGTGAGAGCAGCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCGCCGCGCTTCCCACAACGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 90 bp GCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTaGCTGTACCCTGATGGCGCCCTAGGAGGACCCTCATGTAGAGGG +
Preference number: 1 (lower is better)
Translates to: AKGPLKDVEEHTDGG*LYPDGALGGPSCRG
Trigger: CCCTCTACATGAGGGTCCTCCTAGGGCGCCATCAGGGTACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 90 bp TGCTGTGAGGCTGTGGTGACACCACTCCACCTGCGAAGGGCCCATTaGAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTACCCTG +
Preference number: 1 (lower is better)
Translates to: CCEAVVTPLHLRRAH*RTWKSTRMGAGCTL
Trigger: CAGGGTACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCAGGTGGAGTGGTGTCACCACAGCCTCACAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp CTGGGCCTGACCCCCTGTTGTAGAAGGGATGCTGAGGGCCCGTCATaGCGCTGTAATAGCTGCTGTGAGGCTGTGGTGACACCACTCCAC +
Preference number: 1 (lower is better)
Translates to: LGLTPCCRRDAEGPS*RCNSCCEAVVTPLH
Trigger: GTGGAGTGGTGTCACCACAGCCTCACAGCAGCTATTACAGCGGCATGACGGGCCCTCAGCATCCCTTCTACAACAGGGGGTCAGGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 90 bp CTGAGGGCCCGTCATGCCGCTGTAATAGCTGCTGTGAGGCTGTGGTaGCACCACTCCACCTGCGAAGGGCCCATTGAAGGACGTGGAAGA +
Preference number: 1 (lower is better)
Translates to: LRARHAAVIAAVRLW*HHSTCEGPIEGRGR
Trigger: TCTTCCACGTCCTTCAATGGGCCCTTCGCAGGTGGAGTGGTGTCACCACAGCCTCACAGCAGCTATTACAGCGGCATGACGGGCCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp TGTTGTAGAAGGGATGCTGAGGGCCCGTCATGCCGCTGTAATAGCTaGTGTGAGGCTGTGGTGACACCACTCCACCTGCGAAGGGCCCAT +
Preference number: 1 (lower is better)
Translates to: CCRRDAEGPSCRCNS*CEAVVTPLHLRRAH
Trigger: ATGGGCCCTTCGCAGGTGGAGTGGTGTCACCACAGCCTCACAGCAGCTATTACAGCGGCATGACGGGCCCTCAGCATCCCTTCTACAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp CCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGACTCCTGTGTaGTCACCGAAACGCTCCCCTTCCTCCAGGGCACACAGTCACATG +
Preference number: 1 (lower is better)
Translates to: PVGNPHQRLVAKTPV*SPKRSPSSRAHSHM
Trigger: CATGTGACTGTGTGCCCTGGAGGAAGGGGAGCGTTTCGGTGAGCACACAGGAGTCTTTGCCACTAGACGCTGATGAGGATTCCCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR TCA 90 bp AGCTCAGCAGGAGTCCATGACTTAAGAAGGCCAATGGACTGTGGGTaGAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTG +
Preference number: 1 (lower is better)
Translates to: SSAGVHDLRRPMDCG*SLWTGKPHASLPGL
Trigger: CAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGTCCATTGGCCTTCTTAAGTCATGGACTCCTGCTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR GCA 90 bp AGTCACGGTGCTGGGAGTTCGGTTCAGGTTGTAGGCTTTCTGGCATaGAGGCCAGTTTTCTTCAGGGCTGCTGGCTATCAAGCTGCATTC +
Preference number: 1 (lower is better)
Translates to: SHGAGSSVQVVGFLA*RPVFFRAAGYQAAF
Trigger: GAATGCAGCTTGATAGCCAGCAGCCCTGAAGAAAACTGGCCTGCATGCCAGAAAGCCTACAACCTGAACCGAACTCCCAGCACCGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp GATTGGCTCTGTTGGCTGGAGCACTATTGTTGTTCAGAGTCACGGTaGTGGGAGTTCGGTTCAGGTTGTAGGCTTTCTGGCATGCAGGCC +
Preference number: 1 (lower is better)
Translates to: DWLCWLEHYCCSESR*WEFGSGCRLSGMQA
Trigger: GGCCTGCATGCCAGAAAGCCTACAACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCCAACAGAGCCAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 90 bp GGACATCCGAGCTATAATTGGATCTTGCAGGCCACTCAGGCTATGTaGGATTCCCCGCTTTCCGCTGTGACTGTCATCTTCCAGCTCTAT +
Preference number: 1 (lower is better)
Translates to: GHPSYNWILQATQAM*DSPLSAVTVIFQLY
Trigger: ATAGAGCTGGAAGATGACAGTCACAGCGGAAAGCGGGGAATCCCACATAGCCTGAGTGGCCTGCAAGATCCAATTATAGCTCGGATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 90 bp ATCCACACCACAGGACTACTCCATTACCCTCGAGGAGTCTGTGGGTaGAGAAAGCCCCTCAGCAGCATCCTCCTTGATAACTTCCTAACA +
Preference number: 1 (lower is better)
Translates to: IHTTGLLHYPRGVCG*RKPLSSILLDNFLT
Trigger: TGTTAGGAAGTTATCAAGGAGGATGCTGCTGAGGGGCTTTCTTCACCCACAGACTCCTCGAGGGTAATGGAGTAGTCCTGTGGTGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR TCA 90 bp GTGGGATTCCCCGCTTTCCGCTGTGACTGTCATCTTCCAGCTCTATaGGATTTGCCTTTTCAAGCTGGGAGTCATCCGCCACTTCATTGT +
Preference number: 1 (lower is better)
Translates to: VGFPAFRCDCHLPAL*DLPFQAGSHPPLHC
Trigger: ACAATGAAGTGGCGGATGACTCCCAGCTTGAAAAGGCAAATCTCATAGAGCTGGAAGATGACAGTCACAGCGGAAAGCGGGGAATCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp TCCCCGCTTTCCGCTGTGACTGTCATCTTCCAGCTCTATGAGATTTaGCTTTTCAAGCTGGGAGTCATCCGCCACTTCATTGTGCAGAGA +
Preference number: 1 (lower is better)
Translates to: SPLSAVTVIFQLYEI*LFKLGVIRHFIVQR
Trigger: TCTCTGCACAATGAAGTGGCGGATGACTCCCAGCTTGAAAAGGCAAATCTCATAGAGCTGGAAGATGACAGTCACAGCGGAAAGCGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 90 bp CCACTGCTGCTCTCACTGAGGAAACGTGGGTCTTCAGGGACCACGTaGCTTTCTGCGTTTCTCATTTCTAGTACTGTGCTTCTGAAAAGG +
Preference number: 1 (lower is better)
Translates to: PLLLSLRKRGSSGTT*LSAFLISSTVLLKR
Trigger: CCTTTTCAGAAGCACAGTACTAGAAATGAGAAACGCAGAAAGCCACGTGGTCCCTGAAGACCCACGTTTCCTCAGTGAGAGCAGCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 90 bp GGTTGTAGGCTTTCTGGCATGCAGGCCAGTTTTCTTCAGGGCTGCTaGCTATCAAGCTGCATTCGGAAGGGCTTTTCTTGTCTTCTGAAC +
Preference number: 1 (lower is better)
Translates to: GCRLSGMQASFLQGC*LSSCIRKGFSCLLN
Trigger: GTTCAGAAGACAAGAAAAGCCCTTCCGAATGCAGCTTGATAGCCAGCAGCCCTGAAGAAAACTGGCCTGCATGCCAGAAAGCCTACAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp TCTGGCATGCAGGCCAGTTTTCTTCAGGGCTGCTGGCTATCAAGCTaGATTCGGAAGGGCTTTTCTTGTCTTCTGAACAAATGGACATCC +
Preference number: 1 (lower is better)
Translates to: SGMQASFLQGCWLSS*IRKGFSCLLNKWTS
Trigger: GGATGTCCATTTGTTCAGAAGACAAGAAAAGCCCTTCCGAATGCAGCTTGATAGCCAGCAGCCCTGAAGAAAACTGGCCTGCATGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTaGGCGAGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGC +
Preference number: 1 (lower is better)
Translates to: FENVVSYDHTGYTQA*ARPQQKPYLPTAPC
Trigger: GCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR TCA 90 bp TGTTCTGATCTCTGGGCAAACTCGTTTTTACTGATGGACGTGAGATaGGATGTTGGGAGCCGCCAGGGTAATACCTTGGCGTGTAAAGGT +
Preference number: 1 (lower is better)
Translates to: CSDLWANSFLLMDVR*DVGSRQGNTLACKG
Trigger: ACCTTTACACGCCAAGGTATTACCCTGGCGGCTCCCAACATCTCATCTCACGTCCATCAGTAAAAACGAGTTTGCCCAGAGATCAGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR TCA 90 bp GCCTTTTCAAGCTGGGAGTCATCCGCCACTTCATTGTGCAGAGAGTaGTTGGGAGAACTTTCACTGGATCTCACTCCTGAATCCGATGAA +
Preference number: 1 (lower is better)
Translates to: AFSSWESSATSLCRE*LGELSLDLTPESDE
Trigger: TTCATCGGATTCAGGAGTGAGATCCAGTGAAAGTTCTCCCAATCACTCTCTGCACAATGAAGTGGCGGATGACTCCCAGCTTGAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp TTATGGAGGCGTTTTCTTTGGGAATTCAGGAGCGAGTCCAGCACTTaGCACCATGTACGACAGTTCAACACAAAGGCCAATCCCACTACA +
Preference number: 1 (lower is better)
Translates to: LWRRFLWEFRSESST*HHVRQFNTKANPTT
Trigger: TGTAGTGGGATTGGCCTTTGTGTTGAACTGTCGTACATGGTGGCAAGTGCTGGACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 90 bp GAGTCTCGCCTGCTTTGTTGGGCCTATAAAGTAATCGCCCATCTTTaGGATTTCTTAAAAGCAGTTCTGCCAGTTTCCGGCTCCTTCCAC +
Preference number: 1 (lower is better)
Translates to: ESRLLCWAYKVIAHL*DFLKAVLPVSGSFH
Trigger: GTGGAAGGAGCCGGAAACTGGCAGAACTGCTTTTAAGAAATCCCAAAGATGGGCGATTACTTTATAGGCCCAACAAAGCAGGCGAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 90 bp TTCAATTTGTGCAGTTTGGAGGCTGCATTATGGAGGCGTTTTCTTTaGGAATTCAGGAGCGAGTCCAGCACTTGCCACCATGTACGACAG +
Preference number: 1 (lower is better)
Translates to: FNLCSLEAALWRRFL*EFRSESSTCHHVRQ
Trigger: CTGTCGTACATGGTGGCAAGTGCTGGACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCATAATGCAGCCTCCAAACTGCACAAATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 90 bp CTCTTTGGCTTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTaGAGACTTCGGCACTCTCTCTACTTTCCCTTCGGCTTTTCTGTC +
Preference number: 1 (lower is better)
Translates to: LFGFNEGSDRLSTVF*RLRHSLYFPFGFSV
Trigger: GACAGAAAAGCCGAAGGGAAAGTAGAGAGAGTGCCGAAGTCTCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAAGCCAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 90 bp CTGCTATCATCACAATTAAGACAGTCATTACTGAGGCAGAAGCAATaGGATGCCAGCGATCCACACCACAGGACTACTCCATTACCCTCG +
Preference number: 1 (lower is better)
Translates to: LLSSQLRQSLLRQKQ*DASDPHHRTTPLPS
Trigger: CGAGGGTAATGGAGTAGTCCTGTGGTGTGGATCGCTGGCATCTCATTGCTTCTGCCTCAGTAATGACTGTCTTAATTGTGATGATAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR TCA 90 bp GGTGAACAAATCTCTCTTCTCCAGTCGACTGGACAGCAGGATTACTaGGTAGTAGGTAGGCCGAGTCTTCTTCACCCCCTTATTATTTGG +
Preference number: 1 (lower is better)
Translates to: GEQISLLQSTGQQDY*VVGRPSLLHPLIIW
Trigger: CCAAATAATAAGGGGGTGAAGAAGACTCGGCCTACCTACTACTCAGTAATCCTGCTGTCCAGTCGACTGGAGAAGAGAGATTTGTTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR GCA 90 bp ATCATCACAATTAAGACAGTCATTACTGAGGCAGAAGCAATGAGATaGCAGCGATCCACACCACAGGACTACTCCATTACCCTCGAGGAG +
Preference number: 1 (lower is better)
Translates to: IITIKTVITEAEAMR*QRSTPQDYSITLEE
Trigger: CTCCTCGAGGGTAATGGAGTAGTCCTGTGGTGTGGATCGCTGGCATCTCATTGCTTCTGCCTCAGTAATGACTGTCTTAATTGTGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR GCA 90 bp ATGAGAAAGAAGCAACTCTACTACGTCAGTACGGCCTTTGTAACATaGCCACATAAGAGCTGTCCATCCTCCCATATCACGGTGCTCCAA +
Preference number: 1 (lower is better)
Translates to: MRKKQLYYVSTAFVT*PHKSCPSSHITVLQ
Trigger: TTGGAGCACCGTGATATGGGAGGATGGACAGCTCTTATGTGGGCATGTTACAAAGGCCGTACTGACGTAGTAGAGTTGCTTCTTTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp CTCCTGTCAGGTATGTTCACATATGTTCCAGCGTCGAGCAGATCCTaGACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGCT +
Preference number: 1 (lower is better)
Translates to: LLSGMFTYVPASSRS*TISVCPSFDAIIKA
Trigger: AGCTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATCTGCTCGACGCTGGAACATATGTGAACATACCTGACAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp GGTTGCCAAAAAGCCAAACTCTCTTTCACAAGCATCCGAGAGGGTTaGAATCATTTCAGCCAGAGAAGTTTCTCCACCTACACTGGACAG +
Preference number: 1 (lower is better)
Translates to: GCQKAKLSFTSIREG*NHFSQRSFSTYTGQ
Trigger: CTGTCCAGTGTAGGTGGAGAAACTTCTCTGGCTGAAATGATTGCAACCCTCTCGGATGCTTGTGAAAGAGAGTTTGGCTTTTTGGCAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 90 bp AAGAGAGCCAAGAAGCTCAGTGACACTGCTATTCCAAGATTTGGGTaGACCGTGAAGGCAAACAATAAACCAAGCCCTCCACAAAGTAGC +
Preference number: 1 (lower is better)
Translates to: KRAKKLSDTAIPRFG*TVKANNKPSPPQSS
Trigger: GCTACTTTGTGGAGGGCTTGGTTTATTGTTTGCCTTCACGGTCCACCCAAATCTTGGAATAGCAGTGTCACTGAGCTTCTTGGCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 90 bp TTTCAAGCTGGGAGTCATCCGCCACTTCATTGTGCAGAGAGTGATTaGGAGAACTTTCACTGGATCTCACTCCTGAATCCGATGAATCCT +
Preference number: 1 (lower is better)
Translates to: FQAGSHPPLHCAESD*ENFHWISLLNPMNP
Trigger: AGGATTCATCGGATTCAGGAGTGAGATCCAGTGAAAGTTCTCCCAATCACTCTCTGCACAATGAAGTGGCGGATGACTCCCAGCTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 90 bp CATATTTTTGGAGAAGCGCTCGAACAATTTCAACATGACCACCTCTaGCAGCGCCAATCAACACAGTATCCCCACTCCTGTCAGGTATGT +
Preference number: 1 (lower is better)
Translates to: HIFGEALEQFQHDHL*QRQSTQYPHSCQVC
Trigger: ACATACCTGACAGGAGTGGGGATACTGTGTTGATTGGCGCTGTCAGAGGTGGTCATGTTGAAATTGTTCGAGCGCTTCTCCAAAAATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 90 bp CCTCCACAAAGTAGCAGGGTAAGAAACACTATGAGCCATGAGAACTaGAAGAGAGGCTCAATCTGTTGTCCGGCGAAGGTTTTCATTTCG +
Preference number: 1 (lower is better)
Translates to: PPQSSRVRNTMSHEN*KRGSICCPAKVFIS
Trigger: CGAAATGAAAACCTTCGCCGGACAACAGATTGAGCCTCTCTTTCAGTTCTCATGGCTCATAGTGTTTCTTACCCTGCTACTTTGTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp GTCTCTTCCAAATATAATATGAGCCATGAAGTCCGGTATGGCCACTaGTCAGTAAGGTTGATCCAGCTAGCAAGCCTGTCCCAGTTGAAA +
Preference number: 1 (lower is better)
Translates to: VSSKYNMSHEVRYGH*SVRLIQLASLSQLK
Trigger: TTTCAACTGGGACAGGCTTGCTAGCTGGATCAACCTTACTGAGCAGTGGCCATACCGGACTTCATGGCTCATATTATATTTGGAAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 90 bp TCCACATCAGCTCCCATGGCCAATAAATGTTTCACACATTCCAAATaGCCCTTTCGTGCAGCCCAAACTAAAGGGGTGGTTCCATACTTA +
Preference number: 1 (lower is better)
Translates to: STSAPMANKCFTHSK*PFRAAQTKGVVPYL
Trigger: TAAGTATGGAACCACCCCTTTAGTTTGGGCTGCACGAAAGGGTCATTTGGAATGTGTGAAACATTTATTGGCCATGGGAGCTGATGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 90 bp TCTATATCAGCATATTTTTGGAGAAGCGCTCGAACAATTTCAACATaGCCACCTCTGACAGCGCCAATCAACACAGTATCCCCACTCCTG +
Preference number: 1 (lower is better)
Translates to: SISAYFWRSARTIST*PPLTAPINTVSPLL
Trigger: CAGGAGTGGGGATACTGTGTTGATTGGCGCTGTCAGAGGTGGTCATGTTGAAATTGTTCGAGCGCTTCTCCAAAAATATGCTGATATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp CGGTGCTCCAAGTTAACCCCACATTTCAGTAGTTCCTCTACGATGTaGACATGCCCTTCTTTCGATGCAGATATAAGTGCTGTCCAATTA +
Preference number: 1 (lower is better)
Translates to: RCSKLTPHFSSSSTM*TCPSFDADISAVQL
Trigger: TAATTGGACAGCACTTATATCTGCATCGAAAGAAGGGCATGTGCACATCGTAGAGGAACTACTGAAATGTGGGGTTAACTTGGAGCACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp AAGAGATGTCAACAACTCATCTGTTTGTTACAAGATGAGTCTCCATaGTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAA +
Preference number: 1 (lower is better)
Translates to: KRCQQLICLLQDESP*FIACGESSSASSGK
Trigger: TTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACAAACAGATGAGTTGTTGACATCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CCA 90 bp ATGAATCCTTCACTTTTCAATTTGTGCAGTTTGGAGGCTGCATTATaGAGGCGTTTTCTTTGGGAATTCAGGAGCGAGTCCAGCACTTGC +
Preference number: 1 (lower is better)
Translates to: MNPSLFNLCSLEAAL*RRFLWEFRSESSTC
Trigger: GCAAGTGCTGGACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCATAATGCAGCCTCCAAACTGCACAAATTGAAAAGTGAAGGATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 90 bp TGTACGACAGTTCAACACAAAGGCCAATCCCACTACAGATGCGATTaGTATGAGGACAGCATTTACAGTCAGATGCTTTGGGTCAACTCT +
Preference number: 1 (lower is better)
Translates to: CTTVQHKGQSHYRCD*YEDSIYSQMLWVNS
Trigger: AGAGTTGACCCAAAGCATCTGACTGTAAATGCTGTCCTCATATCAATCGCATCTGTAGTGGGATTGGCCTTTGTGTTGAACTGTCGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp TTTACCCTGAGTATCTTCAGTCTTGAATACTCGAAAAAGCCTGGTTaGCAAAAAGCCAAACTCTCTTTCACAAGCATCCGAGAGGGTTGC +
Preference number: 1 (lower is better)
Translates to: FTLSIFSLEYSKKPG*QKAKLSFTSIREGC
Trigger: GCAACCCTCTCGGATGCTTGTGAAAGAGAGTTTGGCTTTTTGGCAACCAGGCTTTTTCGAGTATTCAAGACTGAAGATACTCAGGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp GCTTCAAATCTGTCTGGAAGAGGCTTGACCTTTCGGAAGATTTCTTaGCTGGGAGAAGCTTACTGCCTGACTGATCTGATTTTTCATCTT +
Preference number: 1 (lower is better)
Translates to: ASNLSGRGLTFRKIS*LGEAYCLTDLIFHL
Trigger: AAGATGAAAAATCAGATCAGTCAGGCAGTAAGCTTCTCCCAGGCAAGAAATCTTCCGAAAGGTCAAGCCTCTTCCAGACAGATTTGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 90 bp GCCTGCACCTTATCAGTAAGCTTTGAAATTTCAATACTGGAATCCTaGGAATTGAGACTCGAAAGACTTGGGGTTCTGCGAGTTTGTGAC +
Preference number: 1 (lower is better)
Translates to: ACTLSVSFEISILES*ELRLERLGVLRVCD
Trigger: GTCACAAACTCGCAGAACCCCAAGTCTTTCGAGTCTCAATTCCCAGGATTCCAGTATTGAAATTTCAAAGCTTACTGATAAGGTGCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 90 bp TGGGCGAGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTaGAAATTTATTTCGTTTCTTGGATTGTGGAAAGAACTGGCTTAC +
Preference number: 1 (lower is better)
Translates to: WARPQQKPYLPTAPC*KFISFLGLWKELAY
Trigger: GTAAGCCAGTTCTTTCCACAATCCAAGAAACGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCTCGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR TCA 90 bp TACTTATCAGAGCAGTTGACTTTAGCACCATTTTGCAGTAAAAGATaGACTATATCTGCATGGCCTCTCCCTGCTGCCCAAATGATTGGG +
Preference number: 1 (lower is better)
Translates to: YLSEQLTLAPFCSKR*TISAWPLPAAQMIG
Trigger: CCCAATCATTTGGGCAGCAGGGAGAGGCCATGCAGATATAGTTCATCTTTTACTGCAAAATGGTGCTAAAGTCAACTGCTCTGATAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 90 bp GAACGTTGGCTTCGCTTATGTGTCATGCTTTTTAGATTCTCATTCTaGATAGTGGTTGGGTTGGGACTGGAACTAGGCCTCAAAATGACT +
Preference number: 1 (lower is better)
Translates to: ERWLRLCVMLFRFSF*IVVGLGLELGLKMT
Trigger: AGTCATTTTGAGGCCTAGTTCCAGTCCCAACCCAACCACTATTCAGAATGAGAATCTAAAAAGCATGACACATAAGCGAAGCCAACGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp AACTTTCATGAATCCTTCACTTTTCAATTTGTGCAGTTTGGAGGCTaGATTATGGAGGCGTTTTCTTTGGGAATTCAGGAGCGAGTCCAG +
Preference number: 1 (lower is better)
Translates to: NFHESFTFQFVQFGG*IMEAFSLGIQERVQ
Trigger: CTGGACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCATAATGCAGCCTCCAAACTGCACAAATTGAAAAGTGAAGGATTCATGAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp GACCACCAGCCTTGTCTGATTCTGAGTGAAGCTGTCAATGGTTTTTaGCATCCTGGCCATCAATTCCACTTCACATTTAAGAACTTTCAT +
Preference number: 1 (lower is better)
Translates to: DHQPCLILSEAVNGF*HPGHQFHFTFKNFH
Trigger: ATGAAAGTTCTTAAATGTGAAGTGGAATTGATGGCCAGGATGGCAAAAACCATTGACAGCTTCACTCAGAATCAGACAAGGCTGGTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 90 bp AATCGTCCTGTCACAGAAACAATATTAAGTAATCTTCTCATGGTCTaGGGACTGATGTCACTGAACCAGTCCTCGGTAACCAGCAGTTTT +
Preference number: 1 (lower is better)
Translates to: NRPVTETILSNLLMV*GLMSLNQSSVTSSF
Trigger: AAAACTGCTGGTTACCGAGGACTGGTTCAGTGACATCAGTCCCCAGACCATGAGAAGATTACTTAATATTGTTTCTGTGACAGGACGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 90 bp GTAAGGTTGATCCAGCTAGCAAGCCTGTCCCAGTTGAAACTAATCTaGTTGGCTCTCAGTAATCGTCCTGTCACAGAAACAATATTAAGT +
Preference number: 1 (lower is better)
Translates to: VRLIQLASLSQLKLI*LALSNRPVTETILS
Trigger: ACTTAATATTGTTTCTGTGACAGGACGATTACTGAGAGCCAATCAGATTAGTTTCAACTGGGACAGGCTTGCTAGCTGGATCAACCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp GGCCACAAATATTTATACAAAACTGTATTAGCACCTAAAATGTCCTaGCAAATAATAATAGCTTGGCTTGCCGGACGCGATGGCTCACAC +
Preference number: 1 (lower is better)
Translates to: GHKYLYKTVLAPKMS*QIIIAWLAGRDGSH
Trigger: GTGTGAGCCATCGCGTCCGGCAAGCCAAGCTATTATTATTTGGCAGGACATTTTAGGTGCTAATACAGTTTTGTATAAATATTTGTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp TCCAAGTTAACCCCACATTTCAGTAGTTCCTCTACGATGTGCACATaGCCTTCTTTCGATGCAGATATAAGTGCTGTCCAATTATCCAAA +
Preference number: 1 (lower is better)
Translates to: SKLTPHFSSSSTMCT*PSFDADISAVQLSK
Trigger: TTTGGATAATTGGACAGCACTTATATCTGCATCGAAAGAAGGGCATGTGCACATCGTAGAGGAACTACTGAAATGTGGGGTTAACTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 90 bp TCTATAGGCATCTCTATACTCGGCCTGCACCTTATCAGTAAGCTTTaGAATTTCAATACTGGAATCCTGGGAATTGAGACTCGAAAGACT +
Preference number: 1 (lower is better)
Translates to: SIGISILGLHLISKL*NFNTGILGIETRKT
Trigger: AGTCTTTCGAGTCTCAATTCCCAGGATTCCAGTATTGAAATTTCAAAGCTTACTGATAAGGTGCAGGCCGAGTATAGAGATGCCTATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 90 bp AATTCAGGAACCATAATTATTAGCATTCAGCTACTCTACACTAGCTaGTCATCACACCACAAACGCAGAGTTAGTGAGCTGCTATCATCA +
Preference number: 1 (lower is better)
Translates to: NSGTIIISIQLLYTS*SSHHKRRVSELLSS
Trigger: TGATGATAGCAGCTCACTAACTCTGCGTTTGTGGTGTGATGAGCAGCTAGTGTAGAGTAGCTGAATGCTAATAATTATGGTTCCTGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR GCA 90 bp CCCACTACAGATGCGATTGATATGAGGACAGCATTTACAGTCAGATaGTTTGGGTCAACTCTAAATATAGCCAGAAGAGTAATTCCAGAT +
Preference number: 1 (lower is better)
Translates to: PTTDAIDMRTAFTVR*FGSTLNIARRVIPD
Trigger: ATCTGGAATTACTCTTCTGGCTATATTTAGAGTTGACCCAAAGCATCTGACTGTAAATGCTGTCCTCATATCAATCGCATCTGTAGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 90 bp TCTGATGGCTACAGTCAATATTATAAGGAGTCTCGCCTGCTTTGTTaGGCCTATAAAGTAATCGCCCATCTTTGGGATTTCTTAAAAGCA +
Preference number: 1 (lower is better)
Translates to: SDGYSQYYKESRLLC*AYKVIAHLWDFLKA
Trigger: TGCTTTTAAGAAATCCCAAAGATGGGCGATTACTTTATAGGCCCAACAAAGCAGGCGAGACTCCTTATAATATTGACTGTAGCCATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 90 bp TTAATATTTGCGTTACCCTTTTATATACTTACTAGGCCATTGTTCTaGTCTCTGGGCAAACTCGTTTTTACTGATGGACGTGAGATGAGA +
Preference number: 1 (lower is better)
Translates to: LIFALPFYILTRPLF*SLGKLVFTDGREMR
Trigger: TCTCATCTCACGTCCATCAGTAAAAACGAGTTTGCCCAGAGATCAGAACAATGGCCTAGTAAGTATATAAAAGGGTAACGCAAATATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR TCA 90 bp CCCTTCTTCCAGTTAGGTGTTAAGATTTTAACAGCCTTTCCTATCTaGATAAAAACTGCACACAAAGTAAACTTAAGAGATGTCAACAAC +
Preference number: 1 (lower is better)
Translates to: PFFQLGVKILTAFPI*IKTAHKVNLRDVNN
Trigger: GTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGTTTTTATTCAGATAGGAAAGGCTGTTAAAATCTTAACACCTAACTGGAAGAAGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CCA 90 bp TCATGGCCATTTATATTTGAATCCCGAAGCACACTATTGAGGTTCTaGTTAATTGCCTTTATGATAATATGTGGATCACTTGCAAAAATG +
Preference number: 1 (lower is better)
Translates to: SWPFIFESRSTLLRF*LIAFMIICGSLAKM
Trigger: CATTTTTGCAAGTGATCCACATATTATCATAAAGGCAATTAACCAGAACCTCAATAGTGTGCTTCGGGATTCAAATATAAATGGCCATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGCTTGCCTCAGCCTCCTaGGTAGCTGGGGCCATAGAC +
Preference number: 2 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVLASAS*VAGAID
Trigger: GTCTATGGCCCCAGCTACTCAGGAGGCTGAGGCAAG...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR GCA 90 bp GCTCGTTGTGGGAAGCGCGGCGAGCAGGCTCACCGTGCGGGGCTGGGCCACTGCCCTCCCATATCACGGTaGTCCAAGTTAACCCCACAT +
Preference number: 2 (lower is better)
Translates to: ARCGKRGEQAHRAGLGHCPPISR*SKLTPH
Trigger: ATGTGGGGTTAACTTGGAGCACCGTGATATGGGAGG...GCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCGCCGCGCTTCCCACAACGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp GCTCGTTGTGGGAAGCGCGGCGAGCAGGCTCACCGTGCGGGGCTGGGCCACTGCAATCTTCTCATGGTCTaGGGACTGATGTCACTGAAC +
Preference number: 2 (lower is better)
Translates to: ARCGKRGEQAHRAGLGHCNLLMV*GLMSLN
Trigger: GTTCAGTGACATCAGTCCCCAGACCATGAGAAGATT...GCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCGCCGCGCTTCCCACAACGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTAAGGACATCTGGCGAGTaGTGGTCCTCTGCATCTGCC +
Preference number: 2 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVRTSGE*WSSASA
Trigger: GGCAGATGCAGAGGACCATCACTCGCCAGATGTCCT...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTACCAGTCCTCCAATACTaGTCTGCTCTCTGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVPVLQY*SALWQH
Trigger: GTGCTGCCAGAGAGCAGATCAGTATTGGAGGACTGG...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp GCCACATGCGTCACTTCCAGGCCTGGGCGTGTGCATCCTCCACTCTCTTCCCCTGGACAGCAGGATTACTaGGTAGTAGGTAGGCCGAGT +
Preference number: 2 (lower is better)
Translates to: ATCVTSRPGRVHPPLSSPGQQDY*VVGRPS
Trigger: ACTCGGCCTACCTACTACTCAGTAATCCTGCTGTCC...AGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR GCA 90 bp GCTCGTTGTGGGAAGCGCGGCGAGCAGGCTCACCGTGCGGGGCTGGGCCACTGCGCACCTAAAATGTCCTaGCAAATAATAATAGCTTGG +
Preference number: 2 (lower is better)
Translates to: ARCGKRGEQAHRAGLGHCAPKMS*QIIIAW
Trigger: CCAAGCTATTATTATTTGGCAGGACATTTTAGGTGC...GCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCGCCGCGCTTCCCACAACGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR GCA 90 bp GCCACATGCGTCACTTCCAGGCCTGGGCGTGTGCATCCTCCACTCTCTTCCCCTCTTGGCCTCCTGAAGTaGTGGGATTATAGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: ATCVTSRPGRVHPPLSSPLGLLK*WDYRRE
Trigger: CTCACGCCTATAATCCCAGCACTTCAGGAGGCCAAG...AGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGTGGAAGATGTGTTTCTaGGACATGAGCGCTCACTTC +
Preference number: 2 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVWKMCF*DMSAHF
Trigger: GAAGTGAGCGCTCATGTCCCAGAAACACATCTTCCA...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR GCA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTAGTCCGGTATGGCCACTaGTCAGTAAGGTTGATCCAG +
Preference number: 2 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVVRYGH*SVRLIQ
Trigger: CTGGATCAACCTTACTGAGCAGTGGCCATACCGGAC...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTGCTGTGAGGCTGTGGTaGCACCACTCCACCTGCGAA +
Preference number: 2 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVAVRLW*HHSTCE
Trigger: TTCGCAGGTGGAGTGGTGTCACCACAGCCTCACAGC...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTCTGGAGAGCTCGGTGTaGGGCAGCTCGTTGTGGGAA +
Preference number: 2 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVLESSV*GSSLWE
Trigger: TTCCCACAACGAGCTGCCTCACACCGAGCTCTCCAG...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGTATCAAGACTGGCTGTaGATATCTGTCCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWYQDWL*ISVPGR
Trigger: CCTCCCAGGGACAGATATCCACAGCCAGTCTTGATA...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CCA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTACAAATAATAATAGCTTaGCTTGCCGGACGCGATGGC +
Preference number: 2 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVQIIIA*LAGRDG
Trigger: GCCATCGCGTCCGGCAAGCCAAGCTATTATTATTTG...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR GCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGAGGGGCCATAGACACCTaGCACCACGCCCGCCTAATT +
Preference number: 2 (lower is better)
Translates to: FENVVSYDHTGYTQAWARGAIDT*HHARLI
Trigger: AATTAGGCGGGCGTGGTGGCAGGTGTCTATGGCCCC...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR GCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGCTCTTCCCCTGTGGGTaGAGAAGGCGGGGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: VKLHLSPILNLTCLWEAELFPCG*RRRGRG
Trigger: CCCTCTGCCCCGCCTTCTGCACCCACAGGGGAAGAG...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR GCA 90 bp AAGCGTGTTCAGCTCTTCGAAGCTGAAGTTGAGTGTGTAGGGCGTCTGGCTGGAAGCGAGTCCAGCACTTaGCACCATGTACGACAGTTC +
Preference number: 2 (lower is better)
Translates to: KRVQLFEAEVECVGRLAGSESST*HHVRQF
Trigger: GAACTGTCGTACATGGTGGCAAGTGCTGGACTCGCT...TCCAGCCAGACGCCCTACACACTCAACTTCAGCTTCGAAGAGCTGAACACGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGCTGAGGGCCCGTCATaGCGCTGTAATAGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: PFCHTADVSFTSASSSVSAEGPS*RCNSCC
Trigger: ACAGCAGCTATTACAGCGGCATGACGGGCCCTCAGC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR GCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGCCAGGCCTGGGCGTGTaGATCCTCCACTCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: VKLHLSPILNLTCLWEAEPGLGV*ILHSLP
Trigger: GGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGG...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR TCA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGGTCAACTGTGAGAAGTaGCTCGAACTTAGTTTAATC +
Preference number: 2 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWVNCEK*LELSLI
Trigger: GATTAAACTAAGTTCGAGTCACTTCTCACAGTTGAC...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR GCA 90 bp CATCCCGAGCCCATTAATACTGATAGAGATACAACTCCACATAACCACGCCATAGACGGGGAAGCCACATaGGTCACTTCCAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: HPEPINTDRDTTPHNHAIDGEAT*VTSRPG
Trigger: CCCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTC...TATGGCGTGGTTATGTGGAGTTGTATCTCTATCAGTATTAATGGGCTCGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGAATTTCCCATGCACCCTaGCAGCTCAGCAGGAGTCCA +
Preference number: 2 (lower is better)
Translates to: FENVVSYDHTGYTQAWARISHAP*QLSRSP
Trigger: TGGACTCCTGCTGAGCTGCCAGGGTGCATGGGAAAT...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR TCA 90 bp AAACAGTCAAAGGCAAAGCTAGAGCTCACACTGAGGAGCAAATACTACCAACGGCTGATGGACGTGAGATaGGATGTTGGGAGCCGCCAG +
Preference number: 2 (lower is better)
Translates to: KQSKAKLELTLRSKYYQRLMDVR*DVGSRQ
Trigger: CTGGCGGCTCCCAACATCTCATCTCACGTCCATCAG...CCGTTGGTAGTATTTGCTCCTCAGTGTGAGCTCTAGCTTTGCCTTTGACTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR-3UTR TCA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTAGTCTCCATTTGTTGCTaGAGTTACGAGAAATTTTCT +
Preference number: 2 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVVSICC*SYEKFS
Trigger: AGAAAATTTCTCGTAACTTCAGCAACAAATGGAGAC...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTGTTCAGAGTCACGGTaGTGGGAGTTCGGTTCAGGT +
Preference number: 2 (lower is better)
Translates to: PFCHTADVSFTSASSSVSCSESR*WEFGSG
Trigger: ACCTGAACCGAACTCCCAGCACCGTGACTCTGAACA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTTTTGCCTTTTCAAGCTaGGAGTCATCCGCCACTTCA +
Preference number: 2 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVFAFSS*ESSATS
Trigger: TGAAGTGGCGGATGACTCCCAGCTTGAAAAGGCAAA...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTGCATGCCACCATGCCTaGCTTAGGTCCCTAAGAGTT +
Preference number: 2 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRACHHA*LRSLRV
Trigger: AACTCTTAGGGACCTAAGCCAGGCATGGTGGCATGC...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR TCA 90 bp AAGCGTGTTCAGCTCTTCGAAGCTGAAGTTGAGTGTGTAGGGCGTCTGGCTGGAATGAGCCATGAGAACTaGAAGAGAGGCTCAATCTGT +
Preference number: 2 (lower is better)
Translates to: KRVQLFEAEVECVGRLAGMSHEN*KRGSIC
Trigger: ACAGATTGAGCCTCTCTTTCAGTTCTCATGGCTCAT...TCCAGCCAGACGCCCTACACACTCAACTTCAGCTTCGAAGAGCTGAACACGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCAACTTAGATTACTGTaGCGAGGGGCACCTTCATCC +
Preference number: 2 (lower is better)
Translates to: PFCHTADVSFTSASSSVSQLRLL*RGAPSS
Trigger: GGATGAAGGTGCCCCTCGTCACAGTAATCTAAGTTG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGTAGGCTTTCTGGCATaGAGGCCAGTTTTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: PFCHTADVSFTSASSSVSVGFLA*RPVFFR
Trigger: CCTGAAGAAAACTGGCCTGCATGCCAGAAAGCCTAC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp ATACTCTTTGGCTTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTGGAGAGGAGGCCTAGGTGGGTaGATCATGAGGTCAGGAGAC +
Preference number: 2 (lower is better)
Translates to: ILFGFNEGSDRLSTVFWRGGLGG*IMRSGD
Trigger: GTCTCCTGACCTCATGATCCACCCACCTAGGCCTCC...TCTCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAAGCCAAAGAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp AAACAGAACTCGGACAGTGTCCAGCATCTGAAGGACTTTGTCCTGCTCACAGGCCAGACCAGTGACACTTaGATTGGCACCATGAGAAAG +
Preference number: 2 (lower is better)
Translates to: KQNSDSVQHLKDFVLLTGQTSDT*IGTMRK
Trigger: CTTTCTCATGGTGCCAATCCAAGTGTCACTGGTCTG...GCCTGTGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGTCCGAGTTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CAA 90 bp ATTATGGAGGCGTTTTCTTTGGGAATTCAGGAGCGAGTCCAGCACTaGCCACCATGTACGACAGTTCAACACAAAGGCCAATCCCACTAC +
Preference number: 2 (lower is better)
Translates to: IMEAFSLGIQERVQH*PPCTTVQHKGQSHY
Trigger: GTAGTGGGATTGGCCTTTGTGTTGAACTGTCGTACATGGTGGCAAGTGCTGGACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CAA 90 bp CAGAAGAGGCTGCTGCATGGAGCTCCGGAGGATCTTTGGAGAGCCTaGTGTAACTTGAACGTTGGCTTCGCTTATGTGTCATGCTTTTTA +
Preference number: 2 (lower is better)
Translates to: QKRLLHGAPEDLWRA*CNLNVGFAYVSCFL
Trigger: TAAAAAGCATGACACATAAGCGAAGCCAACGTTCAAGTTACACAAGGCTCTCCAAAGATCCTCCGGAGCTCCATGCAGCAGCCTCTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGCGGGGCAGAGGGCCCTaGAACCTTGGAGGTCGGTGG +
Preference number: 2 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKRGRGP*NLGGRW
Trigger: CCACCGACCTCCAAGGTTTCAGGGCCCTCTGCCCCG...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR GCA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTATGCCCTTCTTTCGATaGAGATATAAGTGCTGTCCA +
Preference number: 2 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVMPFFR*RYKCCP
Trigger: TGGACAGCACTTATATCTGCATCGAAAGAAGGGCAT...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR GCA 90 bp AAACAGAACTCGGACAGTGTCCAGCATCTGAAGGACTTTGTCCTGCTCACAGGCATAAGGAGTCTCGCCTaGTTTGTTGGGCCTATAAAG +
Preference number: 2 (lower is better)
Translates to: KQNSDSVQHLKDFVLLTGIRSLA*FVGPIK
Trigger: CTTTATAGGCCCAACAAAGCAGGCGAGACTCCTTAT...GCCTGTGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGTCCGAGTTCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCTCACTGAGGAAACGTaGGTCTTCAGGGACCACGTG +
Preference number: 2 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSLTEET*VFRDHV
Trigger: CACGTGGTCCCTGAAGACCCACGTTTCCTCAGTGAG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCATCCGAGCTATAATTaGATCTTGCAGGCCACTCAG +
Preference number: 2 (lower is better)
Translates to: PFCHTADVSFTSASSSVSHPSYN*ILQATQ
Trigger: CTGAGTGGCCTGCAAGATCCAATTATAGCTCGGATG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CAA 90 bp TTTCAATTTGTGCAGTTTGGAGGCTGCATTATGGAGGCGTTTTCTTaGGGAATTCAGGAGCGAGTCCAGCACTTGCCACCATGTACGACA +
Preference number: 2 (lower is better)
Translates to: FQFVQFGGCIMEAFS*GIQERVQHLPPCTT
Trigger: TGTCGTACATGGTGGCAAGTGCTGGACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCATAATGCAGCCTCCAAACTGCACAAATTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp TCTTTGGGATTTCTTAAAAGCAGTTCTGCCAGTTTCCGGCTCCTTCCACGAATACAACATGACCACCTCTaGCAGCGCCAATCAACACAG +
Preference number: 2 (lower is better)
Translates to: SLGFLKSSSASFRLLPRIQHDHL*QRQSTQ
Trigger: CTGTGTTGATTGGCGCTGTCAGAGGTGGTCATGTTG...TATTCGTGGAAGGAGCCGGAAACTGGCAGAACTGCTTTTAAGAAATCCCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTGCACCCAGTAATTTaGAGGCACTGTGTAGGATTT +
Preference number: 2 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRLHPVI*RHCVGF
Trigger: AAATCCTACACAGTGCCTTCAAATTACTGGGTGCAG...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR GCA 90 bp AAACAGAACTCGGACAGTGTCCAGCATCTGAAGGACTTTGTCCTGCTCACAGGCTCACTATTTCCAGATTaGCTTGTTCGGCAGCTATCA +
Preference number: 2 (lower is better)
Translates to: KQNSDSVQHLKDFVLLTGSLFPD*LVRQLS
Trigger: TGATAGCTGCCGAACAAGGCAATCTGGAAATAGTGA...GCCTGTGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGTCCGAGTTCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTCTACGATGTGCACATaGCCTTCTTTCGATGCAGAT +
Preference number: 2 (lower is better)
Translates to: PFCHTADVSFTSASSSVSSTMCT*PSFDAD
Trigger: ATCTGCATCGAAAGAAGGGCATGTGCACATCGTAGA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR GCA 90 bp TTGCTTAGTCCACGACTATTAAGGAACACAGGCAAGTGGACTATGTTGCGCATGATGGCCTCTCCCTGCTaGCCAAATGATTGGGTAAAC +
Preference number: 2 (lower is better)
Translates to: LLSPRLLRNTGKWTMLRMMASPC*PNDWVN
Trigger: GTTTACCCAATCATTTGGGCAGCAGGGAGAGGCCAT...CATGCGCAACATAGTCCACTTGCCTGTGTTCCTTAATAGTCGTGGACTAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR GCA 90 bp ATACTCTTTGGCTTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTGGAGATGCCGCTGTAATAGCTaGTGTGAGGCTGTGGTGACA +
Preference number: 2 (lower is better)
Translates to: ILFGFNEGSDRLSTVFWRCRCNS*CEAVVT
Trigger: TGTCACCACAGCCTCACAGCAGCTATTACAGCGGCA...TCTCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAAGCCAAAGAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTCTCTGGCAACTCAGGTaGATTCACAAACATCAATTT +
Preference number: 2 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVLWQLR*IHKHQF
Trigger: AAATTGATGTTTGTGAATCCACCTGAGTTGCCAGAG...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CAA 90 bp GGAGACTTCGGCACTCTCTCTACTTTCCCTTCGGCTTTTCTGTCTTaGTCATCTTTGAGCAGTGGAGTGTTATCTGATTCTTCTGTGCCA +
Preference number: 2 (lower is better)
Translates to: GDFGTLSTFPSAFLS*SSLSSGVLSDSSVP
Trigger: TGGCACAGAAGAATCAGATAACACTCCACTGCTCAAAGATGACAAAGACAGAAAAGCCGAAGGGAAAGTAGAGAGAGTGCCGAAGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CAA 90 bp CTGCTGCATGGAGCTCCGGAGGATCTTTGGAGAGCCTTGTGTAACTaGAACGTTGGCTTCGCTTATGTGTCATGCTTTTTAGATTCTCAT +
Preference number: 2 (lower is better)
Translates to: LLHGAPEDLWRALCN*NVGFAYVSCFLDSH
Trigger: ATGAGAATCTAAAAAGCATGACACATAAGCGAAGCCAACGTTCAAGTTACACAAGGCTCTCCAAAGATCCTCCGGAGCTCCATGCAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp AAACAGTCAAAGGCAAAGCTAGAGCTCACACTGAGGAGCAAATACTACCAACGGACTAGGCCATTGTTCTaGTCTCTGGGCAAACTCGTT +
Preference number: 2 (lower is better)
Translates to: KQSKAKLELTLRSKYYQRTRPLF*SLGKLV
Trigger: AACGAGTTTGCCCAGAGATCAGAACAATGGCCTAGT...CCGTTGGTAGTATTTGCTCCTCAGTGTGAGCTCTAGCTTTGCCTTTGACTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR-3UTR TCA 90 bp TTGCTTAGTCCACGACTATTAAGGAACACAGGCAAGTGGACTATGTTGCGCATGTCCCTGCTGCCCAAATaGTTGGGTAAACACTGTACA +
Preference number: 2 (lower is better)
Translates to: LLSPRLLRNTGKWTMLRMSLLPK*LGKHCT
Trigger: TGTACAGTGTTTACCCAATCATTTGGGCAGCAGGGA...CATGCGCAACATAGTCCACTTGCCTGTGTTCCTTAATAGTCGTGGACTAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGACCAACAAGTATTTACTaGATGTCCACTGGCTTTCTG +
Preference number: 2 (lower is better)
Translates to: FENVVSYDHTGYTQAWARPTSIY*MSTGFL
Trigger: CAGAAAGCCAGTGGACATTCAGTAAATACTTGTTGG...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR GCA 90 bp AAGCGTGTTCAGCTCTTCGAAGCTGAAGTTGAGTGTGTAGGGCGTCTGGCTGGACGATGCAGATATAAGTaGTGTCCAATTATCCAAATC +
Preference number: 2 (lower is better)
Translates to: KRVQLFEAEVECVGRLAGRCRYK*CPIIQI
Trigger: GATTTGGATAATTGGACAGCACTTATATCTGCATCG...TCCAGCCAGACGCCCTACACACTCAACTTCAGCTTCGAAGAGCTGAACACGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTACACAAATGGGTGGCTaGATGGTAGGCTCACTGAGA +
Preference number: 2 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSTQMGG*MVGSLR
Trigger: TCTCAGTGAGCCTACCATGCAGCCACCCATTTGTGT...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR GCA 90 bp AAGGTTGATCCAGCTAGCAAGCCTGTCCCAGTTGAAACTAATCTGATTGGCTCTAGCATCCGAGAGGGTTaGAATCATTTCAGCCAGAGA +
Preference number: 2 (lower is better)
Translates to: KVDPASKPVPVETNLIGSSIREG*NHFSQR
Trigger: TCTCTGGCTGAAATGATTGCAACCCTCTCGGATGCT...AGAGCCAATCAGATTAGTTTCAACTGGGACAGGCTTGCTAGCTGGATCAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR GCA 90 bp AAGGTTGATCCAGCTAGCAAGCCTGTCCCAGTTGAAACTAATCTGATTGGCTCTGCAAGTGGACTATGTTaGGCATGTAGTCATGGCCAT +
Preference number: 2 (lower is better)
Translates to: KVDPASKPVPVETNLIGSASGLC*ACSHGH
Trigger: ATGGCCATGACTACATGCGCAACATAGTCCACTTGC...AGAGCCAATCAGATTAGTTTCAACTGGGACAGGCTTGCTAGCTGGATCAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTGTAATCGCCCATCTTTaGGATTTCTTAAAAGCAGTT +
Preference number: 2 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVVIAHL*DFLKAV
Trigger: AACTGCTTTTAAGAAATCCCAAAGATGGGCGATTAC...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp CATCCCGAGCCCATTAATACTGATAGAGATACAACTCCACATAACCACGCCATACAAAATGAAGGAGCGTaGGCCTCTGGGTCTTCATGT +
Preference number: 2 (lower is better)
Translates to: HPEPINTDRDTTPHNHAIQNEGA*ASGSSC
Trigger: ACATGAAGACCCAGAGGCCCACGCTCCTTCATTTTG...TATGGCGTGGTTATGTGGAGTTGTATCTCTATCAGTATTAATGGGCTCGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CCA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGCACTCTCTTCCCCTGTaGGTGCAGAAGGCGGGGCAG +
Preference number: 2 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKHSLPL*VQKAGQ
Trigger: CTGCCCCGCCTTCTGCACCCACAGGGGAAGAGAGTG...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR TCA 90 bp AAGGTTGATCCAGCTAGCAAGCCTGTCCCAGTTGAAACTAATCTGATTGGCTCTAAACACTATGAGCCATaGGAACTGAAAGAGAGGCTC +
Preference number: 2 (lower is better)
Translates to: KVDPASKPVPVETNLIGSKHYEP*ELKERL
Trigger: GAGCCTCTCTTTCAGTTCTCATGGCTCATAGTGTTT...AGAGCCAATCAGATTAGTTTCAACTGGGACAGGCTTGCTAGCTGGATCAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGACCTTGCACTTTAAAATaGTGGAGCTTATCAAGACTG +
Preference number: 2 (lower is better)
Translates to: FENVVSYDHTGYTQAWARPCTLK*WSLSRL
Trigger: CAGTCTTGATAAGCTCCATCATTTTAAAGTGCAAGG...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTGCTGGCTATCAAGCTaGATTCGGAAGGGCTTTTCT +
Preference number: 2 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSCWLSS*IRKGFS
Trigger: AGAAAAGCCCTTCCGAATGCAGCTTGATAGCCAGCA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR GCA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGTTCAAGTGCTTCTCTTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISFKCFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAAGAGAAGCACTTGAA...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR GCA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGCAAGATGAGTCTCCATaGTTCATCGCCTGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISQDESP*FIACGE
Trigger: TTCCCCACAGGCGATGAAGCATGGAGACTCATCTTG...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CCA 90 bp AAAGCCAAACTCTCTTTCACAAGCATCCGAGAGGGTTGCAATCATTTCAGCCAGTGCTATTCCAAGATTTaGGTGGACCGTGAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: KAKLSFTSIREGCNHFSQCYSKI*VDREGK
Trigger: TTTGCCTTCACGGTCCACCCAAATCTTGGAATAGCA...CTGGCTGAAATGATTGCAACCCTCTCGGATGCTTGTGAAAGAGAGTTTGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTTTCTCCACCTACACTaGACAGTCTATTGTAATCTG +
Preference number: 2 (lower is better)
Translates to: PFCHTADVSFTSASSSVSFLHLH*TVYCNL
Trigger: CAGATTACAATAGACTGTCCAGTGTAGGTGGAGAAA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CAA 90 bp TCCGATGAATCCTTTTTGTCAAGGAGCGCATCCGATAAATACTCTTaGGCTTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTGGA +
Preference number: 2 (lower is better)
Translates to: SDESFLSRSASDKYS*ALMKVLIGSALCSG
Trigger: TCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAAGCCAAAGAGTATTTATCGGATGCGCTCCTTGACAAAAAGGATTCATCGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp TGCATTTTTAGTCTACACCATCTAGCTTATGTGTCTTTTTGTAGTCTCAAGGGTCTGAGGCAGAAGCAATaGGATGCCAGCGATCCACAC +
Preference number: 2 (lower is better)
Translates to: CIFSLHHLAYVSFCSLKGLRQKQ*DASDPH
Trigger: GTGTGGATCGCTGGCATCTCATTGCTTCTGCCTCAG...ACCCTTGAGACTACAAAAAGACACATAAGCTAGATGGTGTAGACTAAAAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR-3UTR TCA 90 bp ATACTCTTTGGCTTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTGGAGACGTATGTCCCTCCTTTaGTGCAATCATCAAAGCTGT +
Preference number: 2 (lower is better)
Translates to: ILFGFNEGSDRLSTVFWRRMSLL*CNHQSC
Trigger: ACAGCTTTGATGATTGCATCAAAGGAGGGACATACG...TCTCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAAGCCAAAGAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp ATACTCTTTGGCTTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTGGAGAGATTTGGGTGGACCGTaGAGGCAAACAATAAACCAA +
Preference number: 2 (lower is better)
Translates to: ILFGFNEGSDRLSTVFWRDLGGP*RQTINQ
Trigger: TTGGTTTATTGTTTGCCTTCACGGTCCACCCAAATC...TCTCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAAGCCAAAGAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGATTTTTATTAGACATCTaGCCAAGAGGATGCTGTAAG +
Preference number: 2 (lower is better)
Translates to: FENVVSYDHTGYTQAWARFLLDI*PRGCCK
Trigger: CTTACAGCATCCTCTTGGTCAGATGTCTAATAAAAA...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR GCA 90 bp GATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGCTGTATAGTTCCTCTACGATGTaGACATGCCCTTCTTTCGAT +
Preference number: 2 (lower is better)
Translates to: DPAQSPYVPPLMQSSKLYSSSTM*TCPSFD
Trigger: ATCGAAAGAAGGGCATGTGCACATCGTAGAGGAACT...ATACAGCTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGCTGTCAATGGTTTTTaGCATCCTGGCCATCAATTC +
Preference number: 2 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSAVNGF*HPGHQF
Trigger: GAATTGATGGCCAGGATGGCAAAAACCATTGACAGC...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAGGTGATGGGCGTGGATaGAGTCAAAATCCAGGACAA +
Preference number: 2 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVGDGRG*SQNPGQ
Trigger: TTGTCCTGGATTTTGACTCCATCCACGCCCATCACC...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
3UTR-3UTR CCA 90 bp ACATGTGTAATAGCAACCACAGGCTTAACAAAAACAGTCAAAGGCAAAGCTAGAGCCAGGGTAATACCTTaGCGTGTAAAGGTATGGGGC +
Preference number: 2 (lower is better)
Translates to: TCVIATTGLTKTVKGKARARVIP*RVKVWG
Trigger: GCCCCATACCTTTACACGCCAAGGTATTACCCTGGC...TCTAGCTTTGCCTTTGACTGTTTTTGTTAAGCCTGTGGTTGCTATTACACATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR-3UTR CCA 90 bp GATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGCTGTATTGCTGCCCAAATGATTaGGTAAACACTGTACAGACC +
Preference number: 2 (lower is better)
Translates to: DPAQSPYVPPLMQSSKLYCCPND*VNTVQT
Trigger: GGTCTGTACAGTGTTTACCCAATCATTTGGGCAGCA...ATACAGCTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp TCTTTGGGATTTCTTAAAAGCAGTTCTGCCAGTTTCCGGCTCCTTCCACGAATACCCAAACTAAAGGGGTaGTTCCATACTTATCAGAGC +
Preference number: 2 (lower is better)
Translates to: SLGFLKSSSASFRLLPRIPKLKG*FHTYQS
Trigger: GCTCTGATAAGTATGGAACCACCCCTTTAGTTTGGG...TATTCGTGGAAGGAGCCGGAAACTGGCAGAACTGCTTTTAAGAAATCCCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCCACATCAGCTCCCATaGCCAATAAATGTTTCACAC +
Preference number: 2 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSPHQLP*PINVSH
Trigger: GTGTGAAACATTTATTGGCCATGGGAGCTGATGTGG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp AAACAGAACTCGGACAGTGTCCAGCATCTGAAGGACTTTGTCCTGCTCACAGGCATATCAGCATATTTTTaGAGAAGCGCTCGAACAATT +
Preference number: 2 (lower is better)
Translates to: KQNSDSVQHLKDFVLLTGISAYF*RSARTI
Trigger: AATTGTTCGAGCGCTTCTCCAAAAATATGCTGATAT...GCCTGTGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGTCCGAGTTCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGACTGAGATCTAGGATTTaGTCTAAAAGATATCTCGAG +
Preference number: 2 (lower is better)
Translates to: FENVVSYDHTGYTQAWARLRSRI*SKRYLE
Trigger: CTCGAGATATCTTTTAGACCAAATCCTAGATCTCAG...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 90 bp CTGAATAGTGGTTGGGTTGGGACTGGAACTAGGCCTCAAAATGACTaGAGAAGTCTCCCTAATTCCCTCCATCTCATCGAAATTTTGATT +
Preference number: 2 (lower is better)
Translates to: LNSGWVGTGTRPQND*RSLPNSLHLIEILI
Trigger: AATCAAAATTTCGATGAGATGGAGGGAATTAGGGAGACTTCTCAAGTCATTTTGAGGCCTAGTTCCAGTCCCAACCCAACCACTATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp TGCATTTTTAGTCTACACCATCTAGCTTATGTGTCTTTTTGTAGTCTCAAGGGTCCAACGGAACACCCCTaGCAGCTGATAGAAAAAGCC +
Preference number: 2 (lower is better)
Translates to: CIFSLHHLAYVSFCSLKGPTEHP*QLIEKA
Trigger: GGCTTTTTCTATCAGCTGTCAGGGGTGTTCCGTTGG...ACCCTTGAGACTACAAAAAGACACATAAGCTAGATGGTGTAGACTAAAAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR-3UTR TCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCTGGAGTGCAGTAGTGTaGTCACCACTCACTGCATCC +
Preference number: 2 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCWSAVV*SPLTAS
Trigger: GGATGCAGTGAGTGGTGATCACACTACTGCACTCCA...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR GCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCTCTCCCACGTTCAAGTaGTTCTCTTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCSPTFK*FSCLSL
Trigger: GAGGCTGAGGCAAGAGAAGCACTTGAACGTGGGAGA...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CCA 90 bp CTTTGGGTCAACTCTAAATATAGCCAGAAGAGTAATTCCAGATATAATGCAGCCGGTGATGGGCGTGGATaGAGTCAAAATCCAGGACAA +
Preference number: 2 (lower is better)
Translates to: LWVNSKYSQKSNSRYNAAGDGRG*SQNPGQ
Trigger: TTGTCCTGGATTTTGACTCCATCCACGCCCATCACC...GGCTGCATTATATCTGGAATTACTCTTCTGGCTATATTTAGAGTTGACCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGAGGCAGGTGACAGGGTaGGCAGAAAGTGAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKRQVTG*AESERE
Trigger: TTCCCTCTCACTTTCTGCCCACCCTGTCACCTGCCT...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGGATTGTGGAAAGAACTaGCTTACTGAAAACCACACT +
Preference number: 2 (lower is better)
Translates to: VKLHLSPILNLTCLWEAEDCGKN*LTENHT
Trigger: AGTGTGGTTTTCAGTAAGCCAGTTCTTTCCACAATC...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 90 bp GGAACGTCTCCATTTGTTGCTGAAGTTACGAGAAATTTTCTTGCATaGCTTAGTCCACGACTATTAAGGAACACAGGCAAGTGGACTATG +
Preference number: 2 (lower is better)
Translates to: GTSPFVAEVTRNFLA*LSPRLLRNTGKWTM
Trigger: CATAGTCCACTTGCCTGTGTTCCTTAATAGTCGTGGACTAAGCAATGCAAGAAAATTTCTCGTAACTTCAGCAACAAATGGAGACGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CAA 90 bp ACCTTATCAGTAAGCTTTGAAATTTCAATACTGGAATCCTGGGAATaGAGACTCGAAAGACTTGGGGTTCTGCGAGTTTGTGACTGCCAA +
Preference number: 2 (lower is better)
Translates to: TLSVSFEISILESWE*RLERLGVLRVCDCQ
Trigger: TTGGCAGTCACAAACTCGCAGAACCCCAAGTCTTTCGAGTCTCAATTCCCAGGATTCCAGTATTGAAATTTCAAAGCTTACTGATAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CAA 90 bp GGAGAACTTTCACTGGATCTCACTCCTGAATCCGATGAATCCTTTTaGTCAAGGAGCGCATCCGATAAATACTCTTTGGCTTTAATGAAG +
Preference number: 2 (lower is better)
Translates to: GELSLDLTPESDESF*SRSASDKYSLALMK
Trigger: CTTCATTAAAGCCAAAGAGTATTTATCGGATGCGCTCCTTGACAAAAAGGATTCATCGGATTCAGGAGTGAGATCCAGTGAAAGTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATCATTCCGTTGTCTCATaGAGGCCAGTACCTCTGGTT +
Preference number: 2 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNHSVVS*RPVPLV
Trigger: AACCAGAGGTACTGGCCTTCATGAGACAACGGAATG...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
3UTR-3UTR TCA 90 bp TCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCACACTTCAGAGGAGCAGAAGTaGCTGTACTGTTGTTTGCTC +
Preference number: 2 (lower is better)
Translates to: SVNANSLTALTFSHEKHTSEEQK*LYCCLL
Trigger: GAGCAAACAACAGTACAGTCACTTCTGCTCCTCTGA...AGTGTGCTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
3UTR-3UTR TCA 90 bp TTGCTTAGTCCACGACTATTAAGGAACACAGGCAAGTGGACTATGTTGCGCATGTTTTGCAGTAAAAGATaGACTATATCTGCATGGCCT +
Preference number: 2 (lower is better)
Translates to: LLSPRLLRNTGKWTMLRMFCSKR*TISAWP
Trigger: AGGCCATGCAGATATAGTTCATCTTTTACTGCAAAA...CATGCGCAACATAGTCCACTTGCCTGTGTTCCTTAATAGTCGTGGACTAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp GAGTTAAAATACTCTTCTGATGGCTACAGTCAATATTATAAGGAGTCTCGCCTGGAATTAGCTCCTTCTTaGTCCACATCAGCTCCCATG +
Preference number: 2 (lower is better)
Translates to: ELKYSSDGYSQYYKESRLELAPS*STSAPM
Trigger: CATGGGAGCTGATGTGGATCAAGAAGGAGCTAATTC...CAGGCGAGACTCCTTATAATATTGACTGTAGCCATCAGAAGAGTATTTTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGACAGCCTTTCCTATCTaGATAAAAACTGCACACAAA +
Preference number: 2 (lower is better)
Translates to: VKLHLSPILNLTCLWEAETAFPI*IKTAHK
Trigger: TTTGTGTGCAGTTTTTATTCAGATAGGAAAGGCTGT...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR TCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGAAAGAACTGGCTTACTaGAAACCACACTTCTCTAAA +
Preference number: 2 (lower is better)
Translates to: VKLHLSPILNLTCLWEAEKELAY*KPHFSK
Trigger: TTTAGAGAAGTGTGGTTTTCAGTAAGCCAGTTCTTT...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR GCA 90 bp TTGCTTAGTCCACGACTATTAAGGAACACAGGCAAGTGGACTATGTTGCGCATGAATATGTGGATCACTTaGAAAAATGGCAATGAACGG +
Preference number: 2 (lower is better)
Translates to: LLSPRLLRNTGKWTMLRMNMWIT*KNGNER
Trigger: CCGTTCATTGCCATTTTTGCAAGTGATCCACATATT...CATGCGCAACATAGTCCACTTGCCTGTGTTCCTTAATAGTCGTGGACTAAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGCAATGTCAGGTTATATaGAGCTTATTCACATGCTTC +
Preference number: 2 (lower is better)
Translates to: VKLHLSPILNLTCLWEAEQCQVI*SLFTCF
Trigger: GAAGCATGTGAATAAGCTCCATATAACCTGACATTG...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 90 bp AACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGTTTCTaGGATTGTGGAAAGAACTGGCTTACTGAAAACCACACTTCTCTA +
Preference number: 2 (lower is better)
Translates to: NLTCQLLHAGNLFRF*DCGKNWLTENHTSL
Trigger: TAGAGAAGTGTGGTTTTCAGTAAGCCAGTTCTTTCCACAATCCAAGAAACGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CCA 90 bp CCAGAAATTTCTGGCTATAAACAAGTCAACATTTCTTCGCTGAGACTGCTAGTCGTATGGGGCAAAGAATaGCTTAAGAGAACAGTTCCA +
Preference number: 2 (lower is better)
Translates to: PEISGYKQVNISSLRLLVVWGKE*LKRTVP
Trigger: TGGAACTGTTCTCTTAAGCCATTCTTTGCCCCATAC...GACTAGCAGTCTCAGCGAAGAAATGTTGACTTGTTTATAGCCAGAAATTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR-3UTR CCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCGGAGCTTATCAAGACTaGCTGTGGATATCTGTCCCT +
Preference number: 2 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCGAYQD*LWISVP
Trigger: AGGGACAGATATCCACAGCCAGTCTTGATAAGCTCC...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 90 bp AGCAGTTTTATTATCCTGTCCTCTAATGTCTATATCAGCATATTTTaGGAGAAGCGCTCGAACAATTTCAACATGACCACCTCTGACAGC +
Preference number: 2 (lower is better)
Translates to: SSFIILSSNVYISIF*EKRSNNFNMTTSDS
Trigger: GCTGTCAGAGGTGGTCATGTTGAAATTGTTCGAGCGCTTCTCCAAAAATATGCTGATATAGACATTAGAGGACAGGATAATAAAACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCCTGTTTGTTACAAGATaGGTCTCCATGCTTCATCGC +
Preference number: 2 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCLFVTR*VSMLHR
Trigger: GCGATGAAGCATGGAGACTCATCTTGTAACAAACAG...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR GCA 90 bp GAGTTAAAATACTCTTCTGATGGCTACAGTCAATATTATAAGGAGTCTCGCCTGGTAACCTCCTTTCACTaGCACAATAAGTGCAGTCAT +
Preference number: 2 (lower is better)
Translates to: ELKYSSDGYSQYYKESRLVTSFH*HNKCSH
Trigger: ATGACTGCACTTATTGTGGCAGTGAAAGGAGGTTAC...CAGGCGAGACTCCTTATAATATTGACTGTAGCCATCAGAAGAGTATTTTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp TGCATTTTTAGTCTACACCATCTAGCTTATGTGTCTTTTTGTAGTCTCAAGGGTTGGCGTGTAAAGGTATaGGGCAAAGAATGGCTTAAG +
Preference number: 2 (lower is better)
Translates to: CIFSLHHLAYVSFCSLKGWRVKV*GKEWLK
Trigger: CTTAAGCCATTCTTTGCCCCATACCTTTACACGCCA...ACCCTTGAGACTACAAAAAGACACATAAGCTAGATGGTGTAGACTAAAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR-3UTR CCA 90 bp GAGTTAAAATACTCTTCTGATGGCTACAGTCAATATTATAAGGAGTCTCGCCTGGGTAGCCTTTATAAGTaGCGTTTCACCATCCTTTGT +
Preference number: 2 (lower is better)
Translates to: ELKYSSDGYSQYYKESRLGSLYK*RFTILC
Trigger: ACAAAGGATGGTGAAACGCCACTTATAAAGGCTACC...CAGGCGAGACTCCTTATAATATTGACTGTAGCCATCAGAAGAGTATTTTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCACCTGTAAGGAGCTGTaGCACAACAGCACAATGTTA +
Preference number: 2 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCTCKEL*HNSTML
Trigger: TAACATTGTGCTGTTGTGCCACAGCTCCTTACAGGT...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 90 bp TCCACTTCACATTTAAGAACTTTCATGAATCCTTCACTTTTCAATTaGTGCAGTTTGGAGGCTGCATTATGGAGGCGTTTTCTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: STSHLRTFMNPSLFN*CSLEAALWRRFLWE
Trigger: TTCCCAAAGAAAACGCCTCCATAATGCAGCCTCCAAACTGCACAAATTGAAAAGTGAAGGATTCATGAAAGTTCTTAAATGTGAAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCCAAAACAGAAAGCCTTaGAGAGACTCCAAACCCTAT +
Preference number: 2 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCQNRKP*RDSKPY
Trigger: ATAGGGTTTGGAGTCTCTTCAAGGCTTTCTGTTTTG...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 90 bp TGCATATTTCAGTGTCAGGATTGCACTGTAAGATATCTCTCACCATaGTTGCATTTCCTTTCTCAACAGCCCAATACAAAGCAGTTTTAT +
Preference number: 2 (lower is better)
Translates to: CIFQCQDCTVRYLSP*LHFLSQQPNTKQFY
Trigger: ATAAAACTGCTTTGTATTGGGCTGTTGAGAAAGGAAATGCAACAATGGTGAGAGATATCTTACAGTGCAATCCTGACACTGAAATATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR TCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCTTAATCTGGATCCTCTaGAGAGCTATCTATCTCAAG +
Preference number: 2 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCLIWIL*RAIYLK
Trigger: CTTGAGATAGATAGCTCTTCAGAGGATCCAGATTAA...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR TCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCGCATGCTATTGTGGTTaGAAGATTTCCAAAAGCACA +
Preference number: 2 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCACYCG*KISKST
Trigger: TGTGCTTTTGGAAATCTTTCAACCACAATAGCATGC...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR TCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCGAAGAAATTCTGATATaGGCAAACTGGAAAGTGGTC +
Preference number: 2 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCEEILI*ANWKVV
Trigger: GACCACTTTCCAGTTTGCTCATATCAGAATTTCTTC...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 90 bp ATATTTCAGTGTCAGGATTGCACTGTAAGATATCTCTCACCATTGTaGCATTTCCTTTCTCAACAGCCCAATACAAAGCAGTTTTATTAT +
Preference number: 2 (lower is better)
Translates to: IFQCQDCTVRYLSPL*HFLSQQPNTKQFYY
Trigger: ATAATAAAACTGCTTTGTATTGGGCTGTTGAGAAAGGAAATGCAACAATGGTGAGAGATATCTTACAGTGCAATCCTGACACTGAAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp GGCCTGGGCGTGTGCATCCTCCACTCTCTTCCCCTGTaGGTGCAGAAGGCGGGGCAGAGGGCCCTGAAACCT +
Preference number: 3 (lower is better)
Translates to: GLGVCILHSLPL*VQKAGQRALKP
Trigger: AGGTTTCAGGGCCCTCTGCCCCGCCTTCTGCACCCACAGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CCA 72 bp ACGTCAAGAGTGGGCGGCACCTGGAGCCACACTGGCTaGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGT +
Preference number: 3 (lower is better)
Translates to: TSRVGGTWSHTG*AQTLALPLSSC
Trigger: ACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGGTGCCGCCCACTCTTGACGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR TCA 72 bp GCTGTGGTGACACCACTCCACCTGCGAAGGGCCCATTaGAGGACGTGGAAGAGCACACGGATGGGGGCTGGC +
Preference number: 3 (lower is better)
Translates to: AVVTPLHLRRAH*RTWKSTRMGAG
Trigger: GCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCAGGTGGAGTGGTGTCACCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp TGGGTGCAGAAGGCGGGGCAGAGGGCCCTGAAACCTTaGAGGTCGGTGGAGCCCAAAATGAAGGAGCGTGGG +
Preference number: 3 (lower is better)
Translates to: WVQKAGQRALKP*RSVEPKMKERG
Trigger: CCCACGCTCCTTCATTTTGGGCTCCACCGACCTCCAAGGTTTCAGGGCCCTCTGCCCCGCCTTCTGCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CAA 90 bp GCTCGTTGTGGGAAGCGCGGCGAGCAGGCTCACCGTGCGGGGCTGGGCCACTGCCCGTATGTCCCTCCTTaGATGCAATCATCAAAGCTG +
Preference number: 3 (lower is better)
Translates to: ARCGKRGEQAHRAGLGHCPYVPP*MQSSKL
Trigger: CAGCTTTGATGATTGCATCAAAGGAGGGACATACGG...GCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCGCCGCGCTTCCCACAACGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp GGGAAGCCACATGCGTCACTTCCAGGCCTGGGCGTGTaGATCCTCCACTCTCTTCCCCTGTGGGTGCAGAAG +
Preference number: 3 (lower is better)
Translates to: GKPHASLPGLGV*ILHSLPLWVQK
Trigger: CTTCTGCACCCACAGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR GCA 72 bp GGACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATaGGTCACTTCCAGGCCTGGGCGTGTGCATCCTCCA +
Preference number: 3 (lower is better)
Translates to: GLWVKSVDGEAT*VTSRPGRVHPP
Trigger: TGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CCA 72 bp CCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTaGCTGTACCCTGATGGCGCCCTAGGAGGACCCTCA +
Preference number: 3 (lower is better)
Translates to: PLKDVEEHTDGG*LYPDGALGGPS
Trigger: TGAGGGTCCTCCTAGGGCGCCATCAGGGTACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp AGGGATGCTGAGGGCCCGTCATGCCGCTGTAATAGCTaGTGTGAGGCTGTGGTGACACCACTCCACCTGCGA +
Preference number: 3 (lower is better)
Translates to: RDAEGPSCRCNS*CEAVVTPLHLR
Trigger: TCGCAGGTGGAGTGGTGTCACCACAGCCTCACAGCAGCTATTACAGCGGCATGACGGGCCCTCAGCATCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp CCCAGGTTGGAGTGCAGCGGTGCGATCTCGGCTCACTaGAACCTCCGTCTCCCACGTTCAAGTGCTTCTCTT +
Preference number: 3 (lower is better)
Translates to: PRLECSGAISAH*NLRLPRSSASL
Trigger: AAGAGAAGCACTTGAACGTGGGAGACGGAGGTTGCAGTGAGCCGAGATCGCACCGCTGCACTCCAACCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CCA 72 bp CGAAACGCTCCCCTTCCTCCAGGGCACACAGTCACATaGATTTCCCATGCACCCTGGCAGCTCAGCAGGAGT +
Preference number: 3 (lower is better)
Translates to: RNAPLPPGHTVT*ISHAPWQLSRS
Trigger: ACTCCTGCTGAGCTGCCAGGGTGCATGGGAAATCCATGTGACTGTGTGCCCTGGAGGAAGGGGAGCGTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CAA 90 bp GCCACATGCGTCACTTCCAGGCCTGGGCGTGTGCATCCTCCACTCTCTTCCCCTCGGGGTTTCACCATGTaGGCTAGGTTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: ATCVTSRPGRVHPPLSSPRGFTM*ARLVLN
Trigger: GTTCAAGACCAACCTAGCCAACATGGTGAAACCCCG...AGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR GCA 72 bp CTGCAACCTCCGTCTCCCACGTTCAAGTGCTTCTCTTaGCTCAGCCTCCTGAGTAGCTGGGGCCATAGACAC +
Preference number: 3 (lower is better)
Translates to: LQPPSPTFKCFS*LSLLSSWGHRH
Trigger: GTGTCTATGGCCCCAGCTACTCAGGAGGCTGAGGCAAGAGAAGCACTTGAACGTGGGAGACGGAGGTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CAA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGATGGGAGGCACCGCCTaGCACTTTAAAATGATGGAG +
Preference number: 3 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWMGGTA*HFKMME
Trigger: CTCCATCATTTTAAAGTGCAAGGCGGTGCCTCCCAT...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CAA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGAGCATGCTATTGTGGTaGAAAGATTTCCAAAAGCAC +
Preference number: 3 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVSMLLW*KDFQKH
Trigger: GTGCTTTTGGAAATCTTTCAACCACAATAGCATGCT...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CAA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGTTAGGTCTTAGAACATaGTCAGATACACAGTGTGTT +
Preference number: 3 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVLGLRT*SDTQCV
Trigger: AACACACTGTGTATCTGACAATGTTCTAAGACCTAA...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR TCA 72 bp GGAGTCCATGACTTAAGAAGGCCAATGGACTGTGGGTaGAGTCTGTGGACGGGGAAGCCACATGCGTCACTT +
Preference number: 3 (lower is better)
Translates to: GVHDLRRPMDCG*SLWTGKPHASL
Trigger: AAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGTCCATTGGCCTTCTTAAGTCATGGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR GCA 72 bp GCTGGGAGTTCGGTTCAGGTTGTAGGCTTTCTGGCATaGAGGCCAGTTTTCTTCAGGGCTGCTGGCTATCAA +
Preference number: 3 (lower is better)
Translates to: AGSSVQVVGFLA*RPVFFRAAGYQ
Trigger: TTGATAGCCAGCAGCCCTGAAGAAAACTGGCCTGCATGCCAGAAAGCCTACAACCTGAACCGAACTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp CTCTGGGCAAACTCGTTTTTACTGATGGACGTGAGATaGGATGTTGGGAGCCGCCAGGGTAATACCTTGGCG +
Preference number: 3 (lower is better)
Translates to: LWANSFLLMDVR*DVGSRQGNTLA
Trigger: CGCCAAGGTATTACCCTGGCGGCTCCCAACATCTCATCTCACGTCCATCAGTAAAAACGAGTTTGCCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR TCA 72 bp CCCGCTTTCCGCTGTGACTGTCATCTTCCAGCTCTATaGGATTTGCCTTTTCAAGCTGGGAGTCATCCGCCA +
Preference number: 3 (lower is better)
Translates to: PAFRCDCHLPAL*DLPFQAGSHPP
Trigger: TGGCGGATGACTCCCAGCTTGAAAAGGCAAATCTCATAGAGCTGGAAGATGACAGTCACAGCGGAAAGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp ATTTCCCATGCACCCTGGCAGCTCAGCAGGAGTCCATaGCTTAAGAAGGCCAATGGACTGTGGGTGAAGTCT +
Preference number: 3 (lower is better)
Translates to: ISHAPWQLSRSP*LKKANGLWVKS
Trigger: AGACTTCACCCACAGTCCATTGGCCTTCTTAAGTCATGGACTCCTGCTGAGCTGCCAGGGTGCATGGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR GCA 72 bp AGGCTTTCTGGCATGCAGGCCAGTTTTCTTCAGGGCTaGTGGCTATCAAGCTGCATTCGGAAGGGCTTTTCT +
Preference number: 3 (lower is better)
Translates to: RLSGMQASFLQG*WLSSCIRKGFS
Trigger: AGAAAAGCCCTTCCGAATGCAGCTTGATAGCCAGCAGCCCTGAAGAAAACTGGCCTGCATGCCAGAAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp TGTTGGCTGGAGCACTATTGTTGTTCAGAGTCACGGTaGTGGGAGTTCGGTTCAGGTTGTAGGCTTTCTGGC +
Preference number: 3 (lower is better)
Translates to: CWLEHYCCSESR*WEFGSGCRLSG
Trigger: GCCAGAAAGCCTACAACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp TGGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTaGGAGTTCGGTTCAGGTTGTAGGCTTTCTGGCATG +
Preference number: 3 (lower is better)
Translates to: WLEHYCCSESRC*EFGSGCRLSGM
Trigger: CATGCCAGAAAGCCTACAACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CAA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTCCAAATAATAATAGCTaGGCTTGCCGGACGCGATGG +
Preference number: 3 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVPNNNS*ACRTRW
Trigger: CCATCGCGTCCGGCAAGCCAAGCTATTATTATTTGG...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CAA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTAATTTCAGTGTCAGGATaGCACTGTAAGATATCTCTC +
Preference number: 3 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVISVSG*HCKISL
Trigger: GAGAGATATCTTACAGTGCAATCCTGACACTGAAAT...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CAA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTCTGGAATCCTGGGAATaGAGACTCGAAAGACTTGGG +
Preference number: 3 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVLESWE*RLERLG
Trigger: CCCAAGTCTTTCGAGTCTCAATTCCCAGGATTCCAG...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CAA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGAGAGGGCAGCAAGGGGTaGTCACTGAAGATAACTAGC +
Preference number: 3 (lower is better)
Translates to: FENVVSYDHTGYTQAWAREGSKG*SLKITS
Trigger: GCTAGTTATCTTCAGTGACAACCCCTTGCTGCCCTC...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR TCA 72 bp GGAGAAGCGCTCGAACAATTTCAACATGACCACCTCTaGCAGCGCCAATCAACACAGTATCCCCACTCCTGT +
Preference number: 3 (lower is better)
Translates to: GEALEQFQHDHL*QRQSTQYPHSC
Trigger: ACAGGAGTGGGGATACTGTGTTGATTGGCGCTGTCAGAGGTGGTCATGTTGAAATTGTTCGAGCGCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp ATCTCTCTTCTCCAGTCGACTGGACAGCAGGATTACTaGGTAGTAGGTAGGCCGAGTCTTCTTCACCCCCTT +
Preference number: 3 (lower is better)
Translates to: ISLLQSTGQQDY*VVGRPSLLHPL
Trigger: AAGGGGGTGAAGAAGACTCGGCCTACCTACTACTCAGTAATCCTGCTGTCCAGTCGACTGGAGAAGAGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CCA 72 bp TGCAGTTTGGAGGCTGCATTATGGAGGCGTTTTCTTTaGGAATTCAGGAGCGAGTCCAGCACTTGCCACCAT +
Preference number: 3 (lower is better)
Translates to: CSLEAALWRRFL*EFRSESSTCHH
Trigger: ATGGTGGCAAGTGCTGGACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCATAATGCAGCCTCCAAACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp AGCTATAATTGGATCTTGCAGGCCACTCAGGCTATGTaGGATTCCCCGCTTTCCGCTGTGACTGTCATCTTC +
Preference number: 3 (lower is better)
Translates to: SYNWILQATQAM*DSPLSAVTVIF
Trigger: GAAGATGACAGTCACAGCGGAAAGCGGGGAATCCCACATAGCCTGAGTGGCCTGCAAGATCCAATTATAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp CTTTCTGGCATGCAGGCCAGTTTTCTTCAGGGCTGCTaGCTATCAAGCTGCATTCGGAAGGGCTTTTCTTGT +
Preference number: 3 (lower is better)
Translates to: LSGMQASFLQGC*LSSCIRKGFSC
Trigger: ACAAGAAAAGCCCTTCCGAATGCAGCTTGATAGCCAGCAGCCCTGAAGAAAACTGGCCTGCATGCCAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CAA 90 bp AAGCGTGTTCAGCTCTTCGAAGCTGAAGTTGAGTGTGTAGGGCGTCTGGCTGGATTCACTATTTCCAGATaGCCTTGTTCGGCAGCTATC +
Preference number: 3 (lower is better)
Translates to: KRVQLFEAEVECVGRLAGFTISR*PCSAAI
Trigger: GATAGCTGCCGAACAAGGCAATCTGGAAATAGTGAA...TCCAGCCAGACGCCCTACACACTCAACTTCAGCTTCGAAGAGCTGAACACGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp AGCTGGGAGTCATCCGCCACTTCATTGTGCAGAGAGTaGTTGGGAGAACTTTCACTGGATCTCACTCCTGAA +
Preference number: 3 (lower is better)
Translates to: SWESSATSLCRE*LGELSLDLTPE
Trigger: TTCAGGAGTGAGATCCAGTGAAAGTTCTCCCAATCACTCTCTGCACAATGAAGTGGCGGATGACTCCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp TCGGTAACCAGCAGTTTTGTAAGATCAAAGGACATCTaGCGAGTGATGGTCCTCTGCATCTGCCTTCTTCGG +
Preference number: 3 (lower is better)
Translates to: SVTSSFVRSKDI*RVMVLCICLLR
Trigger: CCGAAGAAGGCAGATGCAGAGGACCATCACTCGCCAGATGTCCTTTGATCTTACAAAACTGCTGGTTACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp CTCTCACTGAGGAAACGTGGGTCTTCAGGGACCACGTaGCTTTCTGCGTTTCTCATTTCTAGTACTGTGCTT +
Preference number: 3 (lower is better)
Translates to: LSLRKRGSSGTT*LSAFLISSTVL
Trigger: AAGCACAGTACTAGAAATGAGAAACGCAGAAAGCCACGTGGTCCCTGAAGACCCACGTTTCCTCAGTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp TTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTaGAGACTTCGGCACTCTCTCTACTTTCCCTTCGGC +
Preference number: 3 (lower is better)
Translates to: FNEGSDRLSTVF*RLRHSLYFPFG
Trigger: GCCGAAGGGAAAGTAGAGAGAGTGCCGAAGTCTCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CAA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTCAAGAACTGGGGTCCTaGAAGACAAAAACACTTCAA +
Preference number: 3 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVQELGS*KTKTLQ
Trigger: TTGAAGTGTTTTTGTCTTCAAGGACCCCAGTTCTTG...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp ACACTGTACAGACCAGTGACACTTGGATTGGCACCATaGGAAAGAAGCAACTCTACTACGTCAGTACGGCCT +
Preference number: 3 (lower is better)
Translates to: TLYRPVTLGLAP*ERSNSTTSVRP
Trigger: AGGCCGTACTGACGTAGTAGAGTTGCTTCTTTCTCATGGTGCCAATCCAAGTGTCACTGGTCTGTACAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp AAGCAACTCTACTACGTCAGTACGGCCTTTGTAACATaGCCACATAAGAGCTGTCCATCCTCCCATATCACG +
Preference number: 3 (lower is better)
Translates to: KQLYYVSTAFVT*PHKSCPSSHIT
Trigger: CGTGATATGGGAGGATGGACAGCTCTTATGTGGGCATGTTACAAAGGCCGTACTGACGTAGTAGAGTTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp GGTATGTTCACATATGTTCCAGCGTCGAGCAGATCCTaGACAATCTCCGTATGTCCCTCCTTTGATGCAATC +
Preference number: 3 (lower is better)
Translates to: GMFTYVPASSRS*TISVCPSFDAI
Trigger: GATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATCTGCTCGACGCTGGAACATATGTGAACATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp CTGTCTGGAAGAGGCTTGACCTTTCGGAAGATTTCTTaGCTGGGAGAAGCTTACTGCCTGACTGATCTGATT +
Preference number: 3 (lower is better)
Translates to: LSGRGLTFRKIS*LGEAYCLTDLI
Trigger: AATCAGATCAGTCAGGCAGTAAGCTTCTCCCAGGCAAGAAATCTTCCGAAAGGTCAAGCCTCTTCCAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp TCCGCTGTGACTGTCATCTTCCAGCTCTATGAGATTTaGCTTTTCAAGCTGGGAGTCATCCGCCACTTCATT +
Preference number: 3 (lower is better)
Translates to: SAVTVIFQLYEI*LFKLGVIRHFI
Trigger: AATGAAGTGGCGGATGACTCCCAGCTTGAAAAGGCAAATCTCATAGAGCTGGAAGATGACAGTCACAGCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp TCTGAACAAATGGACATCCGAGCTATAATTGGATCTTaGAGGCCACTCAGGCTATGTGGGATTCCCCGCTTT +
Preference number: 3 (lower is better)
Translates to: SEQMDIRAIIGS*RPLRLCGIPRF
Trigger: AAAGCGGGGAATCCCACATAGCCTGAGTGGCCTGCAAGATCCAATTATAGCTCGGATGTCCATTTGTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp CAGGCCAGTTTTCTTCAGGGCTGCTGGCTATCAAGCTaGATTCGGAAGGGCTTTTCTTGTCTTCTGAACAAA +
Preference number: 3 (lower is better)
Translates to: QASFLQGCWLSS*IRKGFSCLLNK
Trigger: TTTGTTCAGAAGACAAGAAAAGCCCTTCCGAATGCAGCTTGATAGCCAGCAGCCCTGAAGAAAACTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CAA 90 bp AAGCGTGTTCAGCTCTTCGAAGCTGAAGTTGAGTGTGTAGGGCGTCTGGCTGGATCCAAATCTTCCAGATaGCAGTTAGCTCCATTCTTA +
Preference number: 3 (lower is better)
Translates to: KRVQLFEAEVECVGRLAGSKSSR*QLAPFL
Trigger: TAAGAATGGAGCTAACTGCAATCTGGAAGATTTGGA...TCCAGCCAGACGCCCTACACACTCAACTTCAGCTTCGAAGAGCTGAACACGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CAA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTCATGGCCATTTATATTaGAATCCCGAAGCACACTAT +
Preference number: 3 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVHGHLY*NPEAHY
Trigger: ATAGTGTGCTTCGGGATTCAAATATAAATGGCCATG...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CAA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCTATTGAGGGCTGTCTaGCTACCAAGTTTTGTCATC +
Preference number: 3 (lower is better)
Translates to: PFCHTADVSFTSASSSVSLLRAV*LPSFVI
Trigger: GATGACAAAACTTGGTAGCAAGACAGCCCTCAATAG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CAA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTTCACCCCCTTATTATTaGGTGAGGAAGTCAACTGTG +
Preference number: 3 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRSPPYY*VRKSTV
Trigger: CACAGTTGACTTCCTCACCAAATAATAAGGGGGTGA...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CAA 90 bp CCAGAAATTTCTGGCTATAAACAAGTCAACATTTCTTCGCTGAGACTGCTAGTCCGCCAGGGTAATACCTaGGCGTGTAAAGGTATGGGG +
Preference number: 3 (lower is better)
Translates to: PEISGYKQVNISSLRLLVRQGNT*ACKGMG
Trigger: CCCCATACCTTTACACGCCAAGGTATTACCCTGGCG...GACTAGCAGTCTCAGCGAAGAAATGTTGACTTGTTTATAGCCAGAAATTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR-3UTR CAA 90 bp ATACTCTTTGGCTTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTGGAGAATGGAGGCGTTTTCTTaGGGAATTCAGGAGCGAGTC +
Preference number: 3 (lower is better)
Translates to: ILFGFNEGSDRLSTVFWRMEAFS*GIQERV
Trigger: GACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCAT...TCTCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAAGCCAAAGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp TCACAATTAAGACAGTCATTACTGAGGCAGAAGCAATaGGATGCCAGCGATCCACACCACAGGACTACTCCA +
Preference number: 3 (lower is better)
Translates to: SQLRQSLLRQKQ*DASDPHHRTTP
Trigger: TGGAGTAGTCCTGTGGTGTGGATCGCTGGCATCTCATTGCTTCTGCCTCAGTAATGACTGTCTTAATTGTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR TCA 72 bp AGTAGCAGGGTAAGAAACACTATGAGCCATGAGAACTaGAAGAGAGGCTCAATCTGTTGTCCGGCGAAGGTT +
Preference number: 3 (lower is better)
Translates to: SSRVRNTMSHEN*KRGSICCPAKV
Trigger: AACCTTCGCCGGACAACAGATTGAGCCTCTCTTTCAGTTCTCATGGCTCATAGTGTTTCTTACCCTGCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp CCTTTTGAAAACAGAACTCGGACAGTGTCCAGCATCTaGAGGACTTTGTCCTGCTCACAGGCATCTAATCCA +
Preference number: 3 (lower is better)
Translates to: PFENRTRTVSSI*RTLSCSQASNP
Trigger: TGGATTAGATGCCTGTGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGTCCGAGTTCTGTTTTCAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp TCATCCACATGGGAGGCACCGCCTTGCACTTTAAAATaGTGGAGCTTATCAAGACTGGCTGTGGATATCTGT +
Preference number: 3 (lower is better)
Translates to: SSTWEAPPCTLK*WSLSRLAVDIC
Trigger: ACAGATATCCACAGCCAGTCTTGATAAGCTCCATCATTTTAAAGTGCAAGGCGGTGCCTCCCATGTGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR GCA 72 bp ATTAAGACAGTCATTACTGAGGCAGAAGCAATGAGATaGCAGCGATCCACACCACAGGACTACTCCATTACC +
Preference number: 3 (lower is better)
Translates to: IKTVITEAEAMR*QRSTPQDYSIT
Trigger: GGTAATGGAGTAGTCCTGTGGTGTGGATCGCTGGCATCTCATTGCTTCTGCCTCAGTAATGACTGTCTTAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR GCA 72 bp AAATATAATATGAGCCATGAAGTCCGGTATGGCCACTaGTCAGTAAGGTTGATCCAGCTAGCAAGCCTGTCC +
Preference number: 3 (lower is better)
Translates to: KYNMSHEVRYGH*SVRLIQLASLS
Trigger: GGACAGGCTTGCTAGCTGGATCAACCTTACTGAGCAGTGGCCATACCGGACTTCATGGCTCATATTATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp CAACAACTCATCTGTTTGTTACAAGATGAGTCTCCATaGTTCATCGCCTGTGGGGAATCCTCATCAGCGTCT +
Preference number: 3 (lower is better)
Translates to: QQLICLLQDESP*FIACGESSSAS
Trigger: AGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACAAACAGATGAGTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR GCA 72 bp CTCAAGCCTGGGCGAGACCACAACAAAAACCTTACCTaGCAACTGCTCCATGCTGGAAATTTATTTCGTTTC +
Preference number: 3 (lower is better)
Translates to: LKPGRDHNKNLT*QLLHAGNLFRF
Trigger: GAAACGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCTCGCCCAGGCTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CCA 72 bp TATATCTGCATGGCCTCTCCCTGCTGCCCAAATGATTaGGTAAACACTGTACAGACCAGTGACACTTGGATT +
Preference number: 3 (lower is better)
Translates to: YICMASPCCPND*VNTVQTSDTWI
Trigger: AATCCAAGTGTCACTGGTCTGTACAGTGTTTACCCAATCATTTGGGCAGCAGGGAGAGGCCATGCAGATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp AAGAAGCTCAGTGACACTGCTATTCCAAGATTTGGGTaGACCGTGAAGGCAAACAATAAACCAAGCCCTCCA +
Preference number: 3 (lower is better)
Translates to: KKLSDTAIPRFG*TVKANNKPSPP
Trigger: TGGAGGGCTTGGTTTATTGTTTGCCTTCACGGTCCACCCAAATCTTGGAATAGCAGTGTCACTGAGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp GAAAGTGAGAGGGAAGGTGGGACCTGTAAGGAGCTGTaGCACAACAGCACAATGTTAAGGGATTTACATTCA +
Preference number: 3 (lower is better)
Translates to: ESEREGGTCKEL*HNSTMLRDLHS
Trigger: TGAATGTAAATCCCTTAACATTGTGCTGTTGTGCCACAGCTCCTTACAGGTCCCACCTTCCCTCTCACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR TCA 72 bp GCATATTTTTGGAGAAGCGCTCGAACAATTTCAACATaGCCACCTCTGACAGCGCCAATCAACACAGTATCC +
Preference number: 3 (lower is better)
Translates to: AYFWRSARTIST*PPLTAPINTVS
Trigger: GGATACTGTGTTGATTGGCGCTGTCAGAGGTGGTCATGTTGAAATTGTTCGAGCGCTTCTCCAAAAATATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp TGGATCACTTGCAAAAATGGCAATGAACGGGCCTTTTaGAAACAGAACTCGGACAGTGTCCAGCATCTGAAG +
Preference number: 3 (lower is better)
Translates to: WITCKNGNERAF*KQNSDSVQHLK
Trigger: CTTCAGATGCTGGACACTGTCCGAGTTCTGTTTTCAAAAGGCCCGTTCATTGCCATTTTTGCAAGTGATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp ATCCAGCTAGCAAGCCTGTCCCAGTTGAAACTAATCTaGTTGGCTCTCAGTAATCGTCCTGTCACAGAAACA +
Preference number: 3 (lower is better)
Translates to: IQLASLSQLKLI*LALSNRPVTET
Trigger: TGTTTCTGTGACAGGACGATTACTGAGAGCCAATCAGATTAGTTTCAACTGGGACAGGCTTGCTAGCTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp ACCCCACATTTCAGTAGTTCCTCTACGATGTGCACATaGCCTTCTTTCGATGCAGATATAAGTGCTGTCCAA +
Preference number: 3 (lower is better)
Translates to: TPHFSSSSTMCT*PSFDADISAVQ
Trigger: TTGGACAGCACTTATATCTGCATCGAAAGAAGGGCATGTGCACATCGTAGAGGAACTACTGAAATGTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp AAAGCCAAACTCTCTTTCACAAGCATCCGAGAGGGTTaGAATCATTTCAGCCAGAGAAGTTTCTCCACCTAC +
Preference number: 3 (lower is better)
Translates to: KAKLSFTSIREG*NHFSQRSFSTY
Trigger: GTAGGTGGAGAAACTTCTCTGGCTGAAATGATTGCAACCCTCTCGGATGCTTGTGAAAGAGAGTTTGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp CTGCTTTGTTGGGCCTATAAAGTAATCGCCCATCTTTaGGATTTCTTAAAAGCAGTTCTGCCAGTTTCCGGC +
Preference number: 3 (lower is better)
Translates to: LLCWAYKVIAHL*DFLKAVLPVSG
Trigger: GCCGGAAACTGGCAGAACTGCTTTTAAGAAATCCCAAAGATGGGCGATTACTTTATAGGCCCAACAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp TCACTTTTCAATTTGTGCAGTTTGGAGGCTGCATTATaGAGGCGTTTTCTTTGGGAATTCAGGAGCGAGTCC +
Preference number: 3 (lower is better)
Translates to: SLFNLCSLEAAL*RRFLWEFRSES
Trigger: GGACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCATAATGCAGCCTCCAAACTGCACAAATTGAAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTTCAATTTGTGCAGTTaGGAGGCTGCATTATGGAGG +
Preference number: 3 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSFNLCS*EAALWR
Trigger: CCTCCATAATGCAGCCTCCAAACTGCACAAATTGAA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CAA 90 bp ATACTCTTTGGCTTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTGGAGAATTCATCCTCGTCACTaGGGAGTTTTTGATAGCGCA +
Preference number: 3 (lower is better)
Translates to: ILFGFNEGSDRLSTVFWRIHPRH*GVFDSA
Trigger: TGCGCTATCAAAAACTCCCAAGTGACGAGGATGAAT...TCTCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAAGCCAAAGAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CAA 90 bp CATCCCGAGCCCATTAATACTGATAGAGATACAACTCCACATAACCACGCCATAACTGCACCCAGTAATTaGAAGGCACTGTGTAGGATT +
Preference number: 3 (lower is better)
Translates to: HPEPINTDRDTTPHNHAITAPSN*KALCRI
Trigger: AATCCTACACAGTGCCTTCAAATTACTGGGTGCAGT...TATGGCGTGGTTATGTGGAGTTGTATCTCTATCAGTATTAATGGGCTCGGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR TCA 72 bp GTTCAACACAAAGGCCAATCCCACTACAGATGCGATTaGTATGAGGACAGCATTTACAGTCAGATGCTTTGG +
Preference number: 3 (lower is better)
Translates to: VQHKGQSHYRCD*YEDSIYSQMLW
Trigger: CCAAAGCATCTGACTGTAAATGCTGTCCTCATATCAATCGCATCTGTAGTGGGATTGGCCTTTGTGTTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp TCTGTCTTTGTCATCTTTGAGCAGTGGAGTGTTATCTaGTTCTTCTGTGCCAGATTCATCCTCGTCACTTGG +
Preference number: 3 (lower is better)
Translates to: SVFVIFEQWSVI*FFCARFILVTW
Trigger: CCAAGTGACGAGGATGAATCTGGCACAGAAGAATCAGATAACACTCCACTGCTCAAAGATGACAAAGACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp CTACTTTCCCTTCGGCTTTTCTGTCTTTGTCATCTTTaGGCAGTGGAGTGTTATCTGATTCTTCTGTGCCAG +
Preference number: 3 (lower is better)
Translates to: LLSLRLFCLCHL*AVECYLILLCQ
Trigger: CTGGCACAGAAGAATCAGATAACACTCCACTGCTCAAAGATGACAAAGACAGAAAAGCCGAAGGGAAAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp GAAGTCTCCCTAATTCCCTCCATCTCATCGAAATTTTaGTTGGCTCTGTTGGCTGGAGCACTATTGTTGTTC +
Preference number: 3 (lower is better)
Translates to: EVSLIPSISSKF*LALLAGALLLF
Trigger: GAACAACAATAGTGCTCCAGCCAACAGAGCCAATCAAAATTTCGATGAGATGGAGGGAATTAGGGAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp CTTCGCTTATGTGTCATGCTTTTTAGATTCTCATTCTaGATAGTGGTTGGGTTGGGACTGGAACTAGGCCTC +
Preference number: 3 (lower is better)
Translates to: LRLCVMLFRFSF*IVVGLGLELGL
Trigger: GAGGCCTAGTTCCAGTCCCAACCCAACCACTATTCAGAATGAGAATCTAAAAAGCATGACACATAAGCGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp CTGGGCGAGACCACAACAAAAACCTTACCTGCCAACTaGTCCATGCTGGAAATTTATTTCGTTTCTTGGATT +
Preference number: 3 (lower is better)
Translates to: LGETTTKTLPAN*SMLEIYFVSWI
Trigger: AATCCAAGAAACGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCTCGCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CCA 72 bp GTCACAGAAACAATATTAAGTAATCTTCTCATGGTCTaGGGACTGATGTCACTGAACCAGTCCTCGGTAACC +
Preference number: 3 (lower is better)
Translates to: VTETILSNLLMV*GLMSLNQSSVT
Trigger: GGTTACCGAGGACTGGTTCAGTGACATCAGTCCCCAGACCATGAGAAGATTACTTAATATTGTTTCTGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CAA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAACTACCCATTCCGTaGTCTCATGAAGGCCAGTAC +
Preference number: 3 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTQLPIP*SHEGQY
Trigger: GTACTGGCCTTCATGAGACAACGGAATGGGTAGTTG...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
3UTR-3UTR CAA 90 bp TTGCTTAGTCCACGACTATTAAGGAACACAGGCAAGTGGACTATGTTGCGCATGAGTAATCGCCCATCTTaGGGATTTCTTAAAAGCAGT +
Preference number: 3 (lower is better)
Translates to: LLSPRLLRNTGKWTMLRMSNRPS*GFLKSS
Trigger: ACTGCTTTTAAGAAATCCCAAAGATGGGCGATTACT...CATGCGCAACATAGTCCACTTGCCTGTGTTCCTTAATAGTCGTGGACTAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp GAGCAGATCCTGCACAATCTCCGTATGTCCCTCCTTTaGTGCAATCATCAAAGCTGTATTTCCATCTTTATC +
Preference number: 3 (lower is better)
Translates to: EQILHNLRMSLL*CNHQSCISIFI
Trigger: GATAAAGATGGAAATACAGCTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATCTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp GAAGATTTCTTGCCTGGGAGAAGCTTACTGCCTGACTaGTCTGATTTTTCATCTTCTTCAGTGATAGGATCC +
Preference number: 3 (lower is better)
Translates to: EDFLPGRSLLPD*SDFSSSSVIGS
Trigger: GGATCCTATCACTGAAGAAGATGAAAAATCAGATCAGTCAGGCAGTAAGCTTCTCCCAGGCAAGAAATCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp ACCATAATTATTAGCATTCAGCTACTCTACACTAGCTaGTCATCACACCACAAACGCAGAGTTAGTGAGCTG +
Preference number: 3 (lower is better)
Translates to: TIIISIQLLYTS*SSHHKRRVSEL
Trigger: CAGCTCACTAACTCTGCGTTTGTGGTGTGATGAGCAGCTAGTGTAGAGTAGCTGAATGCTAATAATTATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR GCA 72 bp AAGTTAACCCCACATTTCAGTAGTTCCTCTACGATGTaGACATGCCCTTCTTTCGATGCAGATATAAGTGCT +
Preference number: 3 (lower is better)
Translates to: KLTPHFSSSSTM*TCPSFDADISA
Trigger: AGCACTTATATCTGCATCGAAAGAAGGGCATGTGCACATCGTAGAGGAACTACTGAAATGTGGGGTTAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp GAATCCTTCACTTTTCAATTTGTGCAGTTTGGAGGCTaGATTATGGAGGCGTTTTCTTTGGGAATTCAGGAG +
Preference number: 3 (lower is better)
Translates to: ESFTFQFVQFGG*IMEAFSLGIQE
Trigger: CTCCTGAATTCCCAAAGAAAACGCCTCCATAATGCAGCCTCCAAACTGCACAAATTGAAAAGTGAAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp CCTTGTCTGATTCTGAGTGAAGCTGTCAATGGTTTTTaGCATCCTGGCCATCAATTCCACTTCACATTTAAG +
Preference number: 3 (lower is better)
Translates to: PCLILSEAVNGF*HPGHQFHFTFK
Trigger: CTTAAATGTGAAGTGGAATTGATGGCCAGGATGGCAAAAACCATTGACAGCTTCACTCAGAATCAGACAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp CTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATaGAGGCCAGTACCTCTGGTTGCTGAAGTTTTGAAT +
Preference number: 3 (lower is better)
Translates to: LFNVSTTHSVVS*RPVPLVAEVLN
Trigger: ATTCAAAACTTCAGCAACCAGAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
3UTR TCA 72 bp GCGTTACCCTTTTATATACTTACTAGGCCATTGTTCTaGTCTCTGGGCAAACTCGTTTTTACTGATGGACGT +
Preference number: 3 (lower is better)
Translates to: ALPFYILTRPLF*SLGKLVFTDGR
Trigger: ACGTCCATCAGTAAAAACGAGTTTGCCCAGAGATCAGAACAATGGCCTAGTAAGTATATAAAAGGGTAACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459813.1
3UTR CCA 72 bp TACAGTCAATATTATAAGGAGTCTCGCCTGCTTTGTTaGGCCTATAAAGTAATCGCCCATCTTTGGGATTTC +
Preference number: 3 (lower is better)
Translates to: YSQYYKESRLLC*AYKVIAHLWDF
Trigger: GAAATCCCAAAGATGGGCGATTACTTTATAGGCCCAACAAAGCAGGCGAGACTCCTTATAATATTGACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp GCCAACTGCTCCATGCTGGAAATTTATTTCGTTTCTTaGATTGTGGAAAGAACTGGCTTACTGAAAACCACA +
Preference number: 3 (lower is better)
Translates to: ANCSMLEIYFVS*IVERTGLLKTT
Trigger: TGTGGTTTTCAGTAAGCCAGTTCTTTCCACAATCCAAGAAACGAAATAAATTTCCAGCATGGAGCAGTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CAA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGCAACAACTCATCTGTTaGTTACAAGATGAGTCTCCA +
Preference number: 3 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISQQLIC*LQDESP
Trigger: TGGAGACTCATCTTGTAACAAACAGATGAGTTGTTG...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR TCA 72 bp GACTATGTTGCGCATGTAGTCATGGCCATTTATATTTaGATCCCGAAGCACACTATTGAGGTTCTGGTTAAT +
Preference number: 3 (lower is better)
Translates to: DYVAHVVMAIYI*IPKHTIEVLVN
Trigger: ATTAACCAGAACCTCAATAGTGTGCTTCGGGATTCAAATATAAATGGCCATGACTACATGCGCAACATAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp ATCTCTATACTCGGCCTGCACCTTATCAGTAAGCTTTaGAATTTCAATACTGGAATCCTGGGAATTGAGACT +
Preference number: 3 (lower is better)
Translates to: ISILGLHLISKL*NFNTGILGIET
Trigger: AGTCTCAATTCCCAGGATTCCAGTATTGAAATTTCAAAGCTTACTGATAAGGTGCAGGCCGAGTATAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp GTAAACAAAAACCTCACAGGTAAAGCTTTAGTAGTCTaGTCTGGCAACTCAGGTGGATTCACAAACATCAAT +
Preference number: 3 (lower is better)
Translates to: VNKNLTGKALVV*SGNSGGFTNIN
Trigger: ATTGATGTTTGTGAATCCACCTGAGTTGCCAGAGCAGACTACTAAAGCTTTACCTGTGAGGTTTTTGTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR GCA 72 bp GATGCGATTGATATGAGGACAGCATTTACAGTCAGATaGTTTGGGTCAACTCTAAATATAGCCAGAAGAGTA +
Preference number: 3 (lower is better)
Translates to: DAIDMRTAFTVR*FGSTLNIARRV
Trigger: TACTCTTCTGGCTATATTTAGAGTTGACCCAAAGCATCTGACTGTAAATGCTGTCCTCATATCAATCGCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp CCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTaGAAATTTATTTCGTTTCTTGGATTGTGGAAAGAA +
Preference number: 3 (lower is better)
Translates to: PQQKPYLPTAPC*KFISFLGLWKE
Trigger: TTCTTTCCACAATCCAAGAAACGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CAA 90 bp CTTTGGGTCAACTCTAAATATAGCCAGAAGAGTAATTCCAGATATAATGCAGCCTACTTATCAGAGCAGTaGACTTTAGCACCATTTTGC +
Preference number: 3 (lower is better)
Translates to: LWVNSKYSQKSNSRYNAAYLSEQ*TLAPFC
Trigger: GCAAAATGGTGCTAAAGTCAACTGCTCTGATAAGTA...GGCTGCATTATATCTGGAATTACTCTTCTGGCTATATTTAGAGTTGACCCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR TCA 72 bp TCCCTAAGAGTTTGCAACAAAGCATGCTATTGTGGTTaGAAGATTTCCAAAAGCACAGCAGAAAAGCTTACA +
Preference number: 3 (lower is better)
Translates to: SLRVCNKACYCG*KISKSTAEKLT
Trigger: TGTAAGCTTTTCTGCTGTGCTTTTGGAAATCTTTCAACCACAATAGCATGCTTTGTTGCAAACTCTTAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR TCA 72 bp ATTTCGTTTCTTGGATTGTGGAAAGAACTGGCTTACTaGAAACCACACTTCTCTAAAACCCTTCTTCCAGTT +
Preference number: 3 (lower is better)
Translates to: ISFLGLWKELAY*KPHFSKTLLPV
Trigger: AACTGGAAGAAGGGTTTTAGAGAAGTGTGGTTTTCAGTAAGCCAGTTCTTTCCACAATCCAAGAAACGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR GCA 72 bp TTTCACCATCCTTTGTGCATATTTCAGTGTCAGGATTaGACTGTAAGATATCTCTCACCATTGTTGCATTTC +
Preference number: 3 (lower is better)
Translates to: FHHPLCIFQCQD*TVRYLSPLLHF
Trigger: GAAATGCAACAATGGTGAGAGATATCTTACAGTGCAATCCTGACACTGAAATATGCACAAAGGATGGTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp CAGGGAAGCAGCATGTCCTACAACATAGAACACAATTaGCTCAATCAAGATGAATTACCCTTTCAACTAAAT +
Preference number: 3 (lower is better)
Translates to: QGSSMSYNIEHN*LNQDELPFQLN
Trigger: ATTTAGTTGAAAGGGTAATTCATCTTGATTGAGCCAATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
3UTR CCA 72 bp TATTTCCAGATTGCCTTGTTCGGCAGCTATCATCAGTaGAGTCTGGCCACAAATATTTATACAAAACTGTAT +
Preference number: 3 (lower is better)
Translates to: YFQIALFGSYHQ*SLATNIYTKLY
Trigger: ATACAGTTTTGTATAAATATTTGTGGCCAGACTCCACTGATGATAGCTGCCGAACAAGGCAATCTGGAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR-3UTR CAA 90 bp TCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCACACTCTGGTTGCTGAAGTTTaGAATATTTGCCATTTTCAG +
Preference number: 3 (lower is better)
Translates to: SVNANSLTALTFSHEKHTLVAEV*NICHFQ
Trigger: CTGAAAATGGCAAATATTCAAAACTTCAGCAACCAG...AGTGTGCTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
3UTR-3UTR CAA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCAATTTGGGGGTTCAGTaGAATATAAATCATCCCGAG +
Preference number: 3 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCNLGVQ*NINHPE
Trigger: CTCGGGATGATTTATATTCAACTGAACCCCCAAATT...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR GCA 72 bp TATTTATACAAAACTGTATTAGCACCTAAAATGTCCTaGCAAATAATAATAGCTTGGCTTGCCGGACGCGAT +
Preference number: 3 (lower is better)
Translates to: YLYKTVLAPKMS*QIIIAWLAGRD
Trigger: ATCGCGTCCGGCAAGCCAAGCTATTATTATTTGGCAGGACATTTTAGGTGCTAATACAGTTTTGTATAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp ATTGAGGTTCTGGTTAATTGCCTTTATGATAATATGTaGATCACTTGCAAAAATGGCAATGAACGGGCCTTT +
Preference number: 3 (lower is better)
Translates to: IEVLVNCLYDNM*ITCKNGNERAF
Trigger: AAAGGCCCGTTCATTGCCATTTTTGCAAGTGATCCACATATTATCATAAAGGCAATTAACCAGAACCTCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CCA 72 bp GGAAATTTATTTCGTTTCTTGGATTGTGGAAAGAACTaGCTTACTGAAAACCACACTTCTCTAAAACCCTTC +
Preference number: 3 (lower is better)
Translates to: GNLFRFLDCGKN*LTENHTSLKPF
Trigger: GAAGGGTTTTAGAGAAGTGTGGTTTTCAGTAAGCCAGTTCTTTCCACAATCCAAGAAACGAAATAAATTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR-3UTR CAA 90 bp TGCATTTTTAGTCTACACCATCTAGCTTATGTGTCTTTTTGTAGTCTCAAGGGTGGAACCTCTAATATTTaGGGCACAAATGTCTTTCTT +
Preference number: 3 (lower is better)
Translates to: CIFSLHHLAYVSFCSLKGGTSNI*GTNVFL
Trigger: AAGAAAGACATTTGTGCCCAAAATATTAGAGGTTCC...ACCCTTGAGACTACAAAAAGACACATAAGCTAGATGGTGTAGACTAAAAATGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR TCA 90 bp GCTCGTTGTGGGAAGCGCGGCGAGCAGGCTCACCGTGCGGGGCTGGGCCACTGCCTGGAGAGCTCGGTGTaGGGCAGCTCGTTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: ARCGKRGEQAHRAGLGHCLESSV*GSSLWE
Trigger: TTCCCACAACGAGCTGCCTCACACCGAGCTCTCCAG...GCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCGCCGCGCTTCCCACAACGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp GCTCGTTGTGGGAAGCGCGGCGAGCAGGCTCACCGTGCGGGGCTGGGCCACTGCAGGACATCTGGCGAGTaGTGGTCCTCTGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: ARCGKRGEQAHRAGLGHCRTSGE*WSSASA
Trigger: GGCAGATGCAGAGGACCATCACTCGCCAGATGTCCT...GCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCGCCGCGCTTCCCACAACGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGACACCACAGAGGGTGTaGACTGGCATGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVTPQRV*TGMGAP
Trigger: GGGGGCTCCCATGCCAGTCCACACCCTCTGTGGTGT...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GCTCGTTGTGGGAAGCGCGGCGAGCAGGCTCACCGTGCGGGGCTGGGCCACTGCACAGTGTCCAGCATCTaGAGGACTTTGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ARCGKRGEQAHRAGLGHCTVSSI*RTLSCS
Trigger: TGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGT...GCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCGCCGCGCTTCCCACAACGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGGCTGTGAGGCTGTGGTaGCACCACTCCACCTGCGAA +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVAVRLW*HHSTCE
Trigger: TTCGCAGGTGGAGTGGTGTCACCACAGCCTCACAGC...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGTACGGTCTCCCAACCTaGTCCTCAGCTCCGGCGGAA +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVYGLPT*SSAPAE
Trigger: TTCCGCCGGAGCTGAGGACCAGGTTGGGAGACCGTA...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 72 bp GGCTGTGGTGACACCACTCCACCTGCGAAGGGCCCATaGAAGGACGTGGAAGAGCACACGGATGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GCGDTTPPAKGP*KDVEEHTDGGW
Trigger: CCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCAGGTGGAGTGGTGTCACCACAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CAA 72 bp GTGGGTGCAGAAGGCGGGGCAGAGGGCCCTGAAACCTaGGAGGTCGGTGGAGCCCAAAATGAAGGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: VGAEGGAEGPET*EVGGAQNEGAW
Trigger: CCACGCTCCTTCATTTTGGGCTCCACCGACCTCCAAGGTTTCAGGGCCCTCTGCCCCGCCTTCTGCACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGCACACGGATGGGGGCTaGCTGTACCCTGATGGCGCC +
Preference number: 4 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWHTDGG*LYPDGA
Trigger: GGCGCCATCAGGGTACAGCCAGCCCCCATCCGTGTG...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GCTCGTTGTGGGAAGCGCGGCGAGCAGGCTCACCGTGCGGGGCTGGGCCACTGCATGAGCCATGAGAACTaGAAGAGAGGCTCAATCTGT +
Preference number: 4 (lower is better)
Translates to: ARCGKRGEQAHRAGLGHCMSHEN*KRGSIC
Trigger: ACAGATTGAGCCTCTCTTTCAGTTCTCATGGCTCAT...GCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCGCCGCGCTTCCCACAACGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp GCTCGTTGTGGGAAGCGCGGCGAGCAGGCTCACCGTGCGGGGCTGGGCCACTGCGATTTGGGTGGACCGTaGAGGCAAACAATAAACCAA +
Preference number: 4 (lower is better)
Translates to: ARCGKRGEQAHRAGLGHCDLGGP*RQTINQ
Trigger: TTGGTTTATTGTTTGCCTTCACGGTCCACCCAAATC...GCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCGCCGCGCTTCCCACAACGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGCACTGCTGCTCTCACTaGGGAAACGTGGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVHCCSH*GNVGLQ
Trigger: CTGAAGACCCACGTTTCCTCAGTGAGAGCAGCAGTG...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GGGAGCCGCCAGGGTAATACCTTGGCGTGTAAAGGTATGGGGCAAAGAATGGCTGGGCTGGCTGTACCCTaGTGGCGCCCTAGGAGGACC +
Preference number: 4 (lower is better)
Translates to: GSRQGNTLACKGMGQRMAGLAVP*WRPRRT
Trigger: GGTCCTCCTAGGGCGCCATCAGGGTACAGCCAGCCC...AGCCATTCTTTGCCCCATACCTTTACACGCCAAGGTATTACCCTGGCGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR TCA 90 bp GCTCGTTGTGGGAAGCGCGGCGAGCAGGCTCACCGTGCGGGGCTGGGCCACTGCATCTCATCGAAATTTTaGTTGGCTCTGTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ARCGKRGEQAHRAGLGHCISSKF*LALLAG
Trigger: TCCAGCCAACAGAGCCAATCAAAATTTCGATGAGAT...GCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCGCCGCGCTTCCCACAACGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp GCTCGTTGTGGGAAGCGCGGCGAGCAGGCTCACCGTGCGGGGCTGGGCCACTGCCTGGGAGAAGCTTACTaGCTGACTGATCTGATTTTT +
Preference number: 4 (lower is better)
Translates to: ARCGKRGEQAHRAGLGHCLGEAY*LTDLIF
Trigger: AAAAATCAGATCAGTCAGGCAGTAAGCTTCTCCCAG...GCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCGCCGCGCTTCCCACAACGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGCTTGGCCTCCTGAAGTaGTGGGATTATAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVLGLLK*WDYRRE
Trigger: CTCACGCCTATAATCCCAGCACTTCAGGAGGCCAAG...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GCTCGTTGTGGGAAGCGCGGCGAGCAGGCTCACCGTGCGGGGCTGGGCCACTGCGCAATTAACTTTATTTaGATACCTGGTCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: ARCGKRGEQAHRAGLGHCAINFI*IPGPQL
Trigger: GAGCTGAGGACCAGGTATTCAAATAAAGTTAATTGC...GCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCGCCGCGCTTCCCACAACGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGACAGTGTCCAGCATCTaGAGGACTTTGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVTVSSI*RTLSCS
Trigger: TGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGT...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGATCGTGGTACAATACTaGGGCAGCATACTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVIVVQY*GSILWS
Trigger: GGACCAGAGTATGCTGCCTCAGTATTGTACCACGAT...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp GCTCGTTGTGGGAAGCGCGGCGAGCAGGCTCACCGTGCGGGGCTGGGCCACTGCATATCCAATATGTCTTaGCAATCTAGTGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: ARCGKRGEQAHRAGLGHCISNMS*QSSAED
Trigger: GTCCTCAGCACTAGATTGGCAAGACATATTGGATAT...GCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCGCCGCGCTTCCCACAACGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp CACCACAGGACTACTCCATTACCCTCGAGGAGTCTGTGGGTGAAGAAAGCCCCTCACACGGATGGGGGCTaGCTGTACCCTGATGGCGCC +
Preference number: 4 (lower is better)
Translates to: HHRTTPLPSRSLWVKKAPHTDGG*LYPDGA
Trigger: GGCGCCATCAGGGTACAGCCAGCCCCCATCCGTGTG...AGGGGCTTTCTTCACCCACAGACTCCTCGAGGGTAATGGAGTAGTCCTGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR TCA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGCCAGTCCTCCAATACTaGTCTGCTCTCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWPVLQY*SALWQH
Trigger: GTGCTGCCAGAGAGCAGATCAGTATTGGAGGACTGG...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCGAGCAGGCTCACCGTaGGGGGCTGGGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSRAGSP*GAGPLL
Trigger: CAGCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGTCTCGCCTGCTTTGTTaGGCCTATAAAGTAATCGCC +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVSRLLC*AYKVIA
Trigger: GGCGATTACTTTATAGGCCCAACAAAGCAGGCGAGA...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp AAGCGTGTTCAGCTCTTCGAAGCTGAAGTTGAGTGTGTAGGGCGTCTGGCTGGACACACGGATGGGGGCTaGCTGTACCCTGATGGCGCC +
Preference number: 4 (lower is better)
Translates to: KRVQLFEAEVECVGRLAGHTDGG*LYPDGA
Trigger: GGCGCCATCAGGGTACAGCCAGCCCCCATCCGTGTG...TCCAGCCAGACGCCCTACACACTCAACTTCAGCTTCGAAGAGCTGAACACGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp GCCACATGCGTCACTTCCAGGCCTGGGCGTGTGCATCCTCCACTCTCTTCCCCTCACTGGCTGCTGAGGTaGAAGATGTGTTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ATCVTSRPGRVHPPLSSPHWLLR*KMCFWD
Trigger: GTCCCAGAAACACATCTTCCACCTCAGCAGCCAGTG...AGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGCTGCACCCAGTAATTTaGAGGCACTGTGTAGGATTT +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVLHPVI*RHCVGF
Trigger: AAATCCTACACAGTGCCTTCAAATTACTGGGTGCAG...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGTCTACGATGTGCACATaGCCTTCTTTCGATGCAGAT +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVSTMCT*PSFDAD
Trigger: ATCTGCATCGAAAGAAGGGCATGTGCACATCGTAGA...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGATAAGGAGTCTCGCCTaGTTTGTTGGGCCTATAAAG +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVIRSLA*FVGPIK
Trigger: CTTTATAGGCCCAACAAAGCAGGCGAGACTCCTTAT...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GCCACATGCGTCACTTCCAGGCCTGGGCGTGTGCATCCTCCACTCTCTTCCCCTCAAAATGAAGGAGCGTaGGCCTCTGGGTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: ATCVTSRPGRVHPPLSSPQNEGA*ASGSSC
Trigger: ACATGAAGACCCAGAGGCCCACGCTCCTTCATTTTG...AGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGAACCTTACTTGCCTTTaGGAGGCTGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWNLTCL*EAEAGG
Trigger: TCCTCCTGCCTCAGCCTCCCAAAGGCAAGTAAGGTT...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGACACCTGGAGCCACACTaGCTGGGCCCAGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: FENVVSYDHTGYTQAWARHLEPH*LGPDPG
Trigger: GCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGGTG...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGGAGTATCTTCAGTCTTaGATACTCGAAAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVEYLQS*ILEKAW
Trigger: CCAGGCTTTTTCGAGTATTCAAGACTGAAGATACTC...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGCAGATGCGATTGATATaGGGACAGCATTTACAGTCA +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVQMRLI*GQHLQS
Trigger: TGACTGTAAATGCTGTCCTCATATCAATCGCATCTG...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GGGAGCCGCCAGGGTAATACCTTGGCGTGTAAAGGTATGGGGCAAAGAATGGCTCTGCGAAGGGCCCATTaGAGGACGTGGAAGAGCACA +
Preference number: 4 (lower is better)
Translates to: GSRQGNTLACKGMGQRMALRRAH*RTWKST
Trigger: TGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCAG...AGCCATTCTTTGCCCCATACCTTTACACGCCAAGGTATTACCCTGGCGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR TCA 90 bp AGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGCTGGAGAGCTCGGTGTaGGGCAGCTCGTTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SLHASSPVGNPHQRLVAKLESSV*GSSLWE
Trigger: TTCCCACAACGAGCTGCCTCACACCGAGCTCTCCAG...CTTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGCAAGAGACGGCGACTaGAAGCGCGTCGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSARDGD*KRVALT
Trigger: GGTGAGGGCGACGCGCTTGCAGTCGCCGTCTCTTGC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTACCTCCCATATCACGGTaGTCCAAGTTAACCCCACAT +
Preference number: 4 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVPPISR*SKLTPH
Trigger: ATGTGGGGTTAACTTGGAGCACCGTGATATGGGAGG...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTACCTCCAATACTGATCTaGTCTCTGGCAGCACGAACA +
Preference number: 4 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVPPILI*SLAART
Trigger: TGTTCGTGCTGCCAGAGAGCAGATCAGTATTGGAGG...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGACTCTTCCCCTGTGGGTaGAGAAGGCGGGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: FENVVSYDHTGYTQAWARLFPCG*RRRGRG
Trigger: CCCTCTGCCCCGCCTTCTGCACCCACAGGGGAAGAG...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGCAAGATGAGTCTCCATaGTTCATCGCCTGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWQDESP*FIACGE
Trigger: TTCCCCACAGGCGATGAAGCATGGAGACTCATCTTG...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGGGTAGCCTTTATAAGTaGCGTTTCACCATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVGSLYK*RFTILC
Trigger: ACAAAGGATGGTGAAACGCCACTTATAAAGGCTACC...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp CACCACAGGACTACTCCATTACCCTCGAGGAGTCTGTGGGTGAAGAAAGCCCCTCCCTCGAGGAGTCTGTaGGTGAAGAAAGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: HHRTTPLPSRSLWVKKAPPSRSL*VKKAPQ
Trigger: CTGAGGGGCTTTCTTCACCCACAGACTCCTCGAGGG...AGGGGCTTTCTTCACCCACAGACTCCTCGAGGGTAATGGAGTAGTCCTGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR CCA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTAGGTGATGGGCGTGGATaGAGTCAAAATCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVGDGRG*SQNPGQ
Trigger: TTGTCCTGGATTTTGACTCCATCCACGCCCATCACC...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp GCCACATGCGTCACTTCCAGGCCTGGGCGTGTGCATCCTCCACTCTCTTCCCCTAATGAACGGGCCTTTTaGAAACAGAACTCGGACAGT +
Preference number: 4 (lower is better)
Translates to: ATCVTSRPGRVHPPLSSPNERAF*KQNSDS
Trigger: ACTGTCCGAGTTCTGTTTTCAAAAGGCCCGTTCATT...AGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp ATTACTGAGGCAGAAGCAATGAGATGCCAGCGATCCACACCACAGGACTACTCCCGAGGAGTCTGTGGGTaGAGAAAGCCCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ITEAEAMRCQRSTPQDYSRGVCG*RKPLSS
Trigger: GCTGCTGAGGGGCTTTCTTCACCCACAGACTCCTCG...GGAGTAGTCCTGTGGTGTGGATCGCTGGCATCTCATTGCTTCTGCCTCAGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGCCTGGGGCTGGGCCTaGCCCCCTCGAGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKAWGWA*PPRGVC
Trigger: ACAGACTCCTCGAGGGGGTCAGGCCCAGCCCCAGGC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000256707.8
CDS-3UTR TCA 90 bp ACCCTCGAGGAGTCTGTGGGTGAAGAAAGCCCCTCAGCAGCATCCTCCTTGATACTGAGGCAGAAGCAATaGGATGCCAGCGATCCACAC +
Preference number: 4 (lower is better)
Translates to: TLEESVGEESPSAASSLILRQKQ*DASDPH
Trigger: GTGTGGATCGCTGGCATCTCATTGCTTCTGCCTCAG...TATCAAGGAGGATGCTGCTGAGGGGCTTTCTTCACCCACAGACTCCTCGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR TCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGCGGGGCAGAGGGCCCTaGAACCTTGGAGGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: VKLHLSPILNLTCLWEAERGRGP*NLGGRW
Trigger: CCACCGACCTCCAAGGTTTCAGGGCCCTCTGCCCCG...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGGTGACAAGAGACATATaGAAGGGCAAGTGTATCAAA +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVVTRDI*KGKCIK
Trigger: TTTGATACACTTGCCCTTTCATATGTCTCTTGTCAC...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTAAGCATCCGAGAGGGTTaGAATCATTTCAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVSIREG*NHFSQR
Trigger: TCTCTGGCTGAAATGATTGCAACCCTCTCGGATGCT...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTAGTGCAGTTTGGAGGCTaGATTATGGAGGCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVVQFGG*IMEAFS
Trigger: AGAAAACGCCTCCATAATGCAGCCTCCAAACTGCAC...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCGAGCAGGCTCACCGTaGGGGGCTGGGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSRAGSP*GAGPLL
Trigger: CAGCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGACCAGGCCTGGGCGTGTaGATCCTCCACTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: FENVVSYDHTGYTQAWARPGLGV*ILHSLP
Trigger: GGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGG...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GCCACATGCGTCACTTCCAGGCCTGGGCGTGTGCATCCTCCACTCTCTTCCCCTTGCTGCCCAAATGATTaGGTAAACACTGTACAGACC +
Preference number: 4 (lower is better)
Translates to: ATCVTSRPGRVHPPLSSPCCPND*VNTVQT
Trigger: GGTCTGTACAGTGTTTACCCAATCATTTGGGCAGCA...AGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GCCACATGCGTCACTTCCAGGCCTGGGCGTGTGCATCCTCCACTCTCTTCCCCTCCCAAACTAAAGGGGTaGTTCCATACTTATCAGAGC +
Preference number: 4 (lower is better)
Translates to: ATCVTSRPGRVHPPLSSPPKLKG*FHTYQS
Trigger: GCTCTGATAAGTATGGAACCACCCCTTTAGTTTGGG...AGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GCCACATGCGTCACTTCCAGGCCTGGGCGTGTGCATCCTCCACTCTCTTCCCCTCCACATCAGCTCCCATaGCCAATAAATGTTTCACAC +
Preference number: 4 (lower is better)
Translates to: ATCVTSRPGRVHPPLSSPPHQLP*PINVSH
Trigger: GTGTGAAACATTTATTGGCCATGGGAGCTGATGTGG...AGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTATCTCGCCTGCTTTGTTaGGCCTATAAAGTAATCGCC +
Preference number: 4 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVSRLLC*AYKVIA
Trigger: GGCGATTACTTTATAGGCCCAACAAAGCAGGCGAGA...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp AAACAGAACTCGGACAGTGTCCAGCATCTGAAGGACTTTGTCCTGCTCACAGGCTGTAGGGCGTCTGGCTaGAGAGCTCGGTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: KQNSDSVQHLKDFVLLTGCRASG*RARCEA
Trigger: TGCCTCACACCGAGCTCTCCAGCCAGACGCCCTACA...GCCTGTGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGTCCGAGTTCTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGTGGAAGATGTGTTTCTaGGACATGAGCGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWWKMCF*DMSAHF
Trigger: GAAGTGAGCGCTCATGTCCCAGAAACACATCTTCCA...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTAAAACACTATGAGCCATaGGAACTGAAAGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVKHYEP*ELKERL
Trigger: GAGCCTCTCTTTCAGTTCTCATGGCTCATAGTGTTT...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGAGCCAAGAAGCTCAGTaGCACTGCTATTCCAAGATT +
Preference number: 4 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWSQEAQ*HCYSKI
Trigger: AATCTTGGAATAGCAGTGTCACTGAGCTTCTTGGCT...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGGTCTCCATTTGTTGCTaGAGTTACGAGAAATTTTCT +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVVSICC*SYEKFS
Trigger: AGAAAATTTCTCGTAACTTCAGCAACAAATGGAGAC...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGGGCTGGCTGTACCCTaGTGGCGCCCTAGGAGGACC +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKGLAVP*WRPRRT
Trigger: GGTCCTCCTAGGGCGCCATCAGGGTACAGCCAGCCC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGGGCTGGCTGTACCCTaGTGGCGCCCTAGGAGGACC +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSGLAVP*WRPRRT
Trigger: GGTCCTCCTAGGGCGCCATCAGGGTACAGCCAGCCC...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp ATACTCTTTGGCTTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTGGAGAGGGCTGGCTGTACCCTaGTGGCGCCCTAGGAGGACC +
Preference number: 4 (lower is better)
Translates to: ILFGFNEGSDRLSTVFWRGLAVP*WRPRRT
Trigger: GGTCCTCCTAGGGCGCCATCAGGGTACAGCCAGCCC...TCTCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAAGCCAAAGAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp AAACAGAACTCGGACAGTGTCCAGCATCTGAAGGACTTTGTCCTGCTCACAGGCCTGCGAAGGGCCCATTaGAGGACGTGGAAGAGCACA +
Preference number: 4 (lower is better)
Translates to: KQNSDSVQHLKDFVLLTGLRRAH*RTWKST
Trigger: TGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCAG...GCCTGTGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGTCCGAGTTCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp ATTACTGAGGCAGAAGCAATGAGATGCCAGCGATCCACACCACAGGACTACTCCCTGATGGACGTGAGATaGGATGTTGGGAGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: ITEAEAMRCQRSTPQDYSLMDVR*DVGSRQ
Trigger: CTGGCGGCTCCCAACATCTCATCTCACGTCCATCAG...GGAGTAGTCCTGTGGTGTGGATCGCTGGCATCTCATTGCTTCTGCCTCAGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCTGGAGAGCTCGGTGTaGGGCAGCTCGTTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSLESSV*GSSLWE
Trigger: TTCCCACAACGAGCTGCCTCACACCGAGCTCTCCAG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTTGCCTCAGCCTCCTaGGTAGCTGGGGCCATAGAC +
Preference number: 4 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRLASAS*VAGAID
Trigger: GTCTATGGCCCCAGCTACTCAGGAGGCTGAGGCAAG...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCACGGGCCCGCTCGGCTaGAGGCGATGTCAGAGGACG +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLTGPLG*RRCQRT
Trigger: CGTCCTCTGACATCGCCTGCAGCCGAGCGGGCCCGT...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp CATCCCGAGCCCATTAATACTGATAGAGATACAACTCCACATAACCACGCCATAACGGGCCCGCTCGGCTaGAGGCGATGTCAGAGGACG +
Preference number: 4 (lower is better)
Translates to: HPEPINTDRDTTPHNHAITGPLG*RRCQRT
Trigger: CGTCCTCTGACATCGCCTGCAGCCGAGCGGGCCCGT...TATGGCGTGGTTATGTGGAGTTGTATCTCTATCAGTATTAATGGGCTCGGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGGCATTTACAGTCAGATaGTTTGGGTCAACTCTAAAT +
Preference number: 4 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVAFTVR*FGSTLN
Trigger: ATTTAGAGTTGACCCAAAGCATCTGACTGTAAATGC...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGCTCTCAGAAGAGGCTaGTGCATGGAGCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSALRRG*CMELRR
Trigger: CCTCCGGAGCTCCATGCAGCAGCCTCTTCTGAGAGC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp CACCACAGGACTACTCCATTACCCTCGAGGAGTCTGTGGGTGAAGAAAGCCCCTGCAGAAGCAATGAGATaGCAGCGATCCACACCACAG +
Preference number: 4 (lower is better)
Translates to: HHRTTPLPSRSLWVKKAPAEAMR*QRSTPQ
Trigger: CTGTGGTGTGGATCGCTGGCATCTCATTGCTTCTGC...AGGGGCTTTCTTCACCCACAGACTCCTCGAGGGTAATGGAGTAGTCCTGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR GCA 90 bp GCCACATGCGTCACTTCCAGGCCTGGGCGTGTGCATCCTCCACTCTCTTCCCCTAGACACTCTCAGAGTTaGCCCCCTAGTTTATTCATT +
Preference number: 4 (lower is better)
Translates to: ATCVTSRPGRVHPPLSSPRHSQS*PPSLFI
Trigger: AATGAATAAACTAGGGGGGCAACTCTGAGAGTGTCT...AGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTGGGGCCATAGACACCTaGCACCACGCCCGCCTAATT +
Preference number: 4 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRGAIDT*HHARLI
Trigger: AATTAGGCGGGCGTGGTGGCAGGTGTCTATGGCCCC...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGTCAATTTGTGCAGTTTaGAGGCTGCATTATGGAGGC +
Preference number: 4 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWSICAV*RLHYGG
Trigger: GCCTCCATAATGCAGCCTCCAAACTGCACAAATTGA...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTGTAGGGCGTCTGGCTaGAGAGCTCGGTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSCRASG*RARCEA
Trigger: TGCCTCACACCGAGCTCTCCAGCCAGACGCCCTACA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTTGTAGGGCGTCTGGCTaGAGAGCTCGGTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRCRASG*RARCEA
Trigger: TGCCTCACACCGAGCTCTCCAGCCAGACGCCCTACA...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTAATTCTGAATAGTGGTTaGGTTGGGACTGGAACTAGG +
Preference number: 4 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVILNSG*VGTGTR
Trigger: CCTAGTTCCAGTCCCAACCCAACCACTATTCAGAAT...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGACCTGTAAGGAGCTGTaGCACAACAGCACAATGTTA +
Preference number: 4 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWTCKEL*HNSTML
Trigger: TAACATTGTGCTGTTGTGCCACAGCTCCTTACAGGT...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGTGGAGCCACACTGGCTaGGCCCAGACCCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VKLHLSPILNLTCLWEAEWSHTG*AQTLAL
Trigger: CAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCA...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp CATCCCGAGCCCATTAATACTGATAGAGATACAACTCCACATAACCACGCCATAAGAGTGGGCGGCACCTaGAGCCACACTGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HPEPINTDRDTTPHNHAIRVGGT*SHTGWA
Trigger: GGCCCAGCCAGTGTGGCTCCAGGTGCCGCCCACTCT...TATGGCGTGGTTATGTGGAGTTGTATCTCTATCAGTATTAATGGGCTCGGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTACAGATGCGATTGATATaGGGACAGCATTTACAGTCA +
Preference number: 4 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVQMRLI*GQHLQS
Trigger: TGACTGTAAATGCTGTCCTCATATCAATCGCATCTG...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTAGGACATCTGGCGAGTaGTGGTCCTCTGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSRTSGE*WSSASA
Trigger: GGCAGATGCAGAGGACCATCACTCGCCAGATGTCCT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGGGGCTGGCTGTACCCTaGTGGCGCCCTAGGAGGACC +
Preference number: 4 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISGLAVP*WRPRRT
Trigger: GGTCCTCCTAGGGCGCCATCAGGGTACAGCCAGCCC...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GCCACATGCGTCACTTCCAGGCCTGGGCGTGTGCATCCTCCACTCTCTTCCCCTATTCTAGAAAAGCTGTaGAACTTCACCTTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: ATCVTSRPGRVHPPLSSPILEKL*NFTFPL
Trigger: TAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAAT...AGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGCAAGAGACGGCGACTaGAAGCGCGTCGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKARDGD*KRVALT
Trigger: GGTGAGGGCGACGCGCTTGCAGTCGCCGTCTCTTGC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCGCAAGAGACGGCGACTaGAAGCGCGTCGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLARDGD*KRVALT
Trigger: GGTGAGGGCGACGCGCTTGCAGTCGCCGTCTCTTGC...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGCAAGAGACGGCGACTaGAAGCGCGTCGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKARDGD*KRVALT
Trigger: GGTGAGGGCGACGCGCTTGCAGTCGCCGTCTCTTGC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTATCACTATTTCCAGATTaGCTTGTTCGGCAGCTATCA +
Preference number: 4 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVSLFPD*LVRQLS
Trigger: TGATAGCTGCCGAACAAGGCAATCTGGAAATAGTGA...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGAGCTGAGGGCCCGTCATaGCGCTGTAATAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FENVVSYDHTGYTQAWARAEGPS*RCNSCC
Trigger: ACAGCAGCTATTACAGCGGCATGACGGGCCCTCAGC...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGTTAATTACCAATCCCTaGTTACACCACAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWLITNP*LHHRGC
Trigger: ACACCCTCTGTGGTGTAAGCAGGGATTGGTAATTAA...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAACACACGGATGGGGGCTaGCTGTACCCTGATGGCGCC +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKHTDGG*LYPDGA
Trigger: GGCGCCATCAGGGTACAGCCAGCCCCCATCCGTGTG...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGCCACTCAGGCTATGTaGGATTCCCCGCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSATQAM*DSPLSA
Trigger: AGCGGAAAGCGGGGAATCCCACATAGCCTGAGTGGC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTTCAGAGTCACGGTGCTaGGAGTTCGGTTCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVSESRC*EFGSGC
Trigger: ACAACCTGAACCGAACTCCCAGCACCGTGACTCTGA...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp AAACAGAACTCGGACAGTGTCCAGCATCTGAAGGACTTTGTCCTGCTCACAGGCGAAGAGGCTGCTGCATaGAGCTCCGGAGGATCTTTG +
Preference number: 4 (lower is better)
Translates to: KQNSDSVQHLKDFVLLTGEEAAA*SSGGSL
Trigger: CAAAGATCCTCCGGAGCTCCATGCAGCAGCCTCTTC...GCCTGTGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGTCCGAGTTCTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTAGCCTCCTGAGTAGCTaGGGCCATAGACACCTGCCA +
Preference number: 4 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRSLLSS*GHRHLP
Trigger: TGGCAGGTGTCTATGGCCCCAGCTACTCAGGAGGCT...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 72 bp GTGCAGTTTGGAGGCTGCATTATGGAGGCGTTTTCTTaGGGAATTCAGGAGCGAGTCCAGCACTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: VQFGGCIMEAFS*GIQERVQHLPP
Trigger: TGGTGGCAAGTGCTGGACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCATAATGCAGCCTCCAAACTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp AGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGCGAACAATTTCAACATaGCCACCTCTGACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: SLHASSPVGNPHQRLVAKRTIST*PPLTAP
Trigger: TGGCGCTGTCAGAGGTGGTCATGTTGAAATTGTTCG...CTTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTAAGTGTCCCGTCTATTaGGGGCTGTCTTGCTACCAA +
Preference number: 4 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVKCPVY*GLSCYQ
Trigger: TTGGTAGCAAGACAGCCCTCAATAGACGGGACACTT...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCACTGCTGCTCTCACTaGGGAAACGTGGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSHCCSH*GNVGLQ
Trigger: CTGAAGACCCACGTTTCCTCAGTGAGAGCAGCAGTG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GATCTAGGATTTGGTCTAAAAGATATCTCGAGGCTCTTTCCCAATCTATTGCTCGCCTGGGGCTGGGCCTaGCCCCCTGTTGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: DLGFGLKDISRLFPNLLLAWGWA*PPVVEG
Trigger: CCCTTCTACAACAGGGGGTCAGGCCCAGCCCCAGGC...GAGCAATAGATTGGGAAAGAGCCTCGAGATATCTTTTAGACCAAATCCTAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCCAGCATTTTCTTCCTaGGTCTGCTCATGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRPAFSS*VCSCCP
Trigger: GGGGCAGCATGAGCAGACTCAGGAAGAAAATGCTGG...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAACGGGCCCGCTCGGCTaGAGGCGATGTCAGAGGACG +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVTGPLG*RRCQRT
Trigger: CGTCCTCTGACATCGCCTGCAGCCGAGCGGGCCCGT...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TTATCTAGCAGCAGCTCCACCACTTCAATGTTTCTCATCTTGGTAGCCTTTATAACGGGCCCGCTCGGCTaGAGGCGATGTCAGAGGACG +
Preference number: 4 (lower is better)
Translates to: LSSSSSTTSMFLILVAFITGPLG*RRCQRT
Trigger: CGTCCTCTGACATCGCCTGCAGCCGAGCGGGCCCGT...TATAAAGGCTACCAAGATGAGAAACATTGAAGTGGTGGAGCTGCTGCTAGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp AGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGCCTCCCATATCACGGTaGTCCAAGTTAACCCCACAT +
Preference number: 4 (lower is better)
Translates to: SLHASSPVGNPHQRLVAKPPISR*SKLTPH
Trigger: ATGTGGGGTTAACTTGGAGCACCGTGATATGGGAGG...CTTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGATATCCAATATGTCTTaGCAATCTAGTGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWISNMS*QSSAED
Trigger: GTCCTCAGCACTAGATTGGCAAGACATATTGGATAT...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp AAACAGAACTCGGACAGTGTCCAGCATCTGAAGGACTTTGTCCTGCTCACAGGCGTCCGGTATGGCCACTaGTCAGTAAGGTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: KQNSDSVQHLKDFVLLTGVRYGH*SVRLIQ
Trigger: CTGGATCAACCTTACTGAGCAGTGGCCATACCGGAC...GCCTGTGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGTCCGAGTTCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp AGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGCCTCCAATACTGATCTaGTCTCTGGCAGCACGAACA +
Preference number: 4 (lower is better)
Translates to: SLHASSPVGNPHQRLVAKPPILI*SLAART
Trigger: TGTTCGTGCTGCCAGAGAGCAGATCAGTATTGGAGG...CTTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GCCACATGCGTCACTTCCAGGCCTGGGCGTGTGCATCCTCCACTCTCTTCCCCTGTAATCGCCCATCTTTaGGATTTCTTAAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: ATCVTSRPGRVHPPLSSPVIAHL*DFLKAV
Trigger: AACTGCTTTTAAGAAATCCCAAAGATGGGCGATTAC...AGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGCTCTGGCAACTCAGGTaGATTCACAAACATCAATTT +
Preference number: 4 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWLWQLR*IHKHQF
Trigger: AAATTGATGTTTGTGAATCCACCTGAGTTGCCAGAG...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGACTCACTGAGGAAACGTaGGTCTTCAGGGACCACGTG +
Preference number: 4 (lower is better)
Translates to: FENVVSYDHTGYTQAWARLTEET*VFRDHV
Trigger: CACGTGGTCCCTGAAGACCCACGTTTCCTCAGTGAG...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGAAGAGGCTGCTGCATaGAGCTCCGGAGGATCTTTG +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSEEAAA*SSGGSL
Trigger: CAAAGATCCTCCGGAGCTCCATGCAGCAGCCTCTTC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTTTCACACATTCCAAATaGCCCTTTCGTGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVFTHSK*PFRAAQ
Trigger: TTGGGCTGCACGAAAGGGTCATTTGGAATGTGTGAA...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTGAATTAGCTCCTTCTTaGTCCACATCAGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVELAPS*STSAPM
Trigger: CATGGGAGCTGATGTGGATCAAGAAGGAGCTAATTC...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCAACATGACCACCTCTaGCAGCGCCAATCAACACAG +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSQHDHL*QRQSTQ
Trigger: CTGTGTTGATTGGCGCTGTCAGAGGTGGTCATGTTG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGCTGCGAAGGGCCCATTaGAGGACGTGGAAGAGCACA +
Preference number: 4 (lower is better)
Translates to: VKLHLSPILNLTCLWEAELRRAH*RTWKST
Trigger: TGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCAG...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGCTGTGAGGCTGTGGTaGCACCACTCCACCTGCGAA +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKAVRLW*HHSTCE
Trigger: TTCGCAGGTGGAGTGGTGTCACCACAGCCTCACAGC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCGAGGAGTCTGTGGGTaGAGAAAGCCCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKRGVCG*RKPLSS
Trigger: GCTGCTGAGGGGCTTTCTTCACCCACAGACTCCTCG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256707.8
CDS-3UTR TCA 90 bp GAGTTAAAATACTCTTCTGATGGCTACAGTCAATATTATAAGGAGTCTCGCCTGGCCTGGGGCTGGGCCTaGCCCCCTGTTGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: ELKYSSDGYSQYYKESRLAWGWA*PPVVEG
Trigger: CCCTTCTACAACAGGGGGTCAGGCCCAGCCCCAGGC...CAGGCGAGACTCCTTATAATATTGACTGTAGCCATCAGAAGAGTATTTTAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTAGCGAGTCCAGCACTTaGCACCATGTACGACAGTTC +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSSESST*HHVRQF
Trigger: GAACTGTCGTACATGGTGGCAAGTGCTGGACTCGCT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTGTCCGGTATGGCCACTaGTCAGTAAGGTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRVRYGH*SVRLIQ
Trigger: CTGGATCAACCTTACTGAGCAGTGGCCATACCGGAC...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCGAGCAGGCTCACCGTaGGGGGCTGGGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCRAGSP*GAGPLL
Trigger: CAGCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCG...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTTGCTGGCTATCAAGCTaGATTCGGAAGGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVCWLSS*IRKGFS
Trigger: AGAAAAGCCCTTCCGAATGCAGCTTGATAGCCAGCA...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGCTCTCAGAAGAGGCTaGTGCATGGAGCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSALRRG*CMELRR
Trigger: CCTCCGGAGCTCCATGCAGCAGCCTCTTCTGAGAGC...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp ATACTCTTTGGCTTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTGGAGAGCTCTCAGAAGAGGCTaGTGCATGGAGCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: ILFGFNEGSDRLSTVFWRALRRG*CMELRR
Trigger: CCTCCGGAGCTCCATGCAGCAGCCTCTTCTGAGAGC...TCTCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAAGCCAAAGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCTTCTCCAAAGCCTGTaGTCTCAGAAGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSLLQSL*SQKRLL
Trigger: CAGCAGCCTCTTCTGAGAGCACAGGCTTTGGAGAAG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGAACATCCTGCCACATCTaGAAGAACAGGGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: FENVVSYDHTGYTQAWARTSCHI*KNREKP
Trigger: GGGCTTCTCCCTGTTCTTGCAGATGTGGCAGGATGT...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACACACGGATGGGGGCTaGCTGTACCCTGATGGCGCC +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVHTDGG*LYPDGA
Trigger: GGCGCCATCAGGGTACAGCCAGCCCCCATCCGTGTG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp CGAGCAGATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGCTCACTGAGGAAACGTaGGTCTTCAGGGACCACGTG +
Preference number: 4 (lower is better)
Translates to: RADPAQSPYVPPLMQSSKLTEET*VFRDHV
Trigger: CACGTGGTCCCTGAAGACCCACGTTTCCTCAGTGAG...CTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATCTGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTGTAGGGCGTCTGGCTaGAGAGCTCGGTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSCRASG*RARCEA
Trigger: TGCCTCACACCGAGCTCTCCAGCCAGACGCCCTACA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTGGGAAGCATCGTTGGTaGAAACCCCTGATGATGAAT +
Preference number: 4 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVGKHRW*KPLMMN
Trigger: ATTCATCATCAGGGGTTTCCACCAACGATGCTTCCC...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTACGGTCTCCCAACCTaGTCCTCAGCTCCGGCGGAA +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKYGLPT*SSAPAE
Trigger: TTCCGCCGGAGCTGAGGACCAGGTTGGGAGACCGTA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473731.5
CDS-3UTR CCA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGCACTCTCTTCCCCTGTaGGTGCAGAAGGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISHSLPL*VQKAGQ
Trigger: CTGCCCCGCCTTCTGCACCCACAGGGGAAGAGAGTG...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 72 bp AGCCATGAAGTCCGGTATGGCCACTGCTCAGTAAGGTaGATCCAGCTAGCAAGCCTGTCCCAGTTGAAACTA +
Preference number: 4 (lower is better)
Translates to: SHEVRYGHCSVR*IQLASLSQLKL
Trigger: TAGTTTCAACTGGGACAGGCTTGCTAGCTGGATCAACCTTACTGAGCAGTGGCCATACCGGACTTCATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CAA 72 bp CTGCTGCATGGAGCTCCGGAGGATCTTTGGAGAGCCTaGTGTAACTTGAACGTTGGCTTCGCTTATGTGTCA +
Preference number: 4 (lower is better)
Translates to: LLHGAPEDLWRA*CNLNVGFAYVS
Trigger: TGACACATAAGCGAAGCCAACGTTCAAGTTACACAAGGCTCTCCAAAGATCCTCCGGAGCTCCATGCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp AGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGATGAGCCATGAGAACTaGAAGAGAGGCTCAATCTGT +
Preference number: 4 (lower is better)
Translates to: SLHASSPVGNPHQRLVAKMSHEN*KRGSIC
Trigger: ACAGATTGAGCCTCTCTTTCAGTTCTCATGGCTCAT...CTTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTAAGTGTCCCGTCTATTaGGGGCTGTCTTGCTACCAA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSKCPVY*GLSCYQ
Trigger: TTGGTAGCAAGACAGCCCTCAATAGACGGGACACTT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAAGGACATCTGGCGAGTaGTGGTCCTCTGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKRTSGE*WSSASA
Trigger: GGCAGATGCAGAGGACCATCACTCGCCAGATGTCCT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAACTGCGAAGGGCCCATTaGAGGACGTGGAAGAGCACA +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKLRRAH*RTWKST
Trigger: TGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCAG...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCTGCGAAGGGCCCATTaGAGGACGTGGAAGAGCACA +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKLRRAH*RTWKST
Trigger: TGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCAG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAACTGATGGACGTGAGATaGGATGTTGGGAGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKLMDVR*DVGSRQ
Trigger: CTGGCGGCTCCCAACATCTCATCTCACGTCCATCAG...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256707.8
ENST00000473731.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCTGATGGACGTGAGATaGGATGTTGGGAGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKLMDVR*DVGSRQ
Trigger: CTGGCGGCTCCCAACATCTCATCTCACGTCCATCAG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256707.8
ENST00000473731.5
CDS-3UTR TCA 90 bp TCCAGATTGCCTTGTTCGGCAGCTATCATCAGTGGAGTCTGGCCACAAATATTTCACTGCTGCTCTCACTaGGGAAACGTGGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SRLPCSAAIISGVWPQIFHCCSH*GNVGLQ
Trigger: CTGAAGACCCACGTTTCCTCAGTGAGAGCAGCAGTG...AAATATTTGTGGCCAGACTCCACTGATGATAGCTGCCGAACAAGGCAATCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTGGAATCCTGGGAATTaGGACTCGAAAGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSWNPGN*DSKDLG
Trigger: CCCCAAGTCTTTCGAGTCTCAATTCCCAGGATTCCA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGTGTGTTTCTGGGACATaGGCGCTCACTTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: VKLHLSPILNLTCLWEAECVSGT*ALTSGG
Trigger: CCCTCCAGAAGTGAGCGCTCATGTCCCAGAAACACA...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTACACAAATGGGTGGCTaGATGGTAGGCTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSTQMGG*MVGSLR
Trigger: TCTCAGTGAGCCTACCATGCAGCCACCCATTTGTGT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCCTCCAATACTGATCTaGTCTCTGGCAGCACGAACA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSPPILI*SLAART
Trigger: TGTTCGTGCTGCCAGAGAGCAGATCAGTATTGGAGG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGCTGTATGCTGAGGGCCCGTCATaGCGCTGTAATAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DPAQSPYVPPLMQSSKLYAEGPS*RCNSCC
Trigger: ACAGCAGCTATTACAGCGGCATGACGGGCCCTCAGC...ATACAGCTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTTTCAAGTGCTTCTCTTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRFKCFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAAGAGAAGCACTTGAA...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp AAAGCCAAACTCTCTTTCACAAGCATCCGAGAGGGTTGCAATCATTTCAGCCAGCCCCACACAAATGGGTaGCTGCATGGTAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: KAKLSFTSIREGCNHFSQPHTNG*LHGRLT
Trigger: AGTGAGCCTACCATGCAGCCACCCATTTGTGTGGGG...CTGGCTGAAATGATTGCAACCCTCTCGGATGCTTGTGAAAGAGAGTTTGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp AAGCGTGTTCAGCTCTTCGAAGCTGAAGTTGAGTGTGTAGGGCGTCTGGCTGGATGCTATTCCAAGATTTaGGTGGACCGTGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: KRVQLFEAEVECVGRLAGCYSKI*VDREGK
Trigger: TTTGCCTTCACGGTCCACCCAAATCTTGGAATAGCA...TCCAGCCAGACGCCCTACACACTCAACTTCAGCTTCGAAGAGCTGAACACGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp AGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGTGCTATTCCAAGATTTaGGTGGACCGTGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: SLHASSPVGNPHQRLVAKCYSKI*VDREGK
Trigger: TTTGCCTTCACGGTCCACCCAAATCTTGGAATAGCA...CTTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTGGAGGCGTTTTCTTTaGGAATTCAGGAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSWRRFL*EFRSES
Trigger: GGACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTTGGAGGCGTTTTCTTTaGGAATTCAGGAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRWRRFL*EFRSES
Trigger: GGACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCA...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp AAGCGTGTTCAGCTCTTCGAAGCTGAAGTTGAGTGTGTAGGGCGTCTGGCTGGATCAATTTGTGCAGTTTaGAGGCTGCATTATGGAGGC +
Preference number: 4 (lower is better)
Translates to: KRVQLFEAEVECVGRLAGSICAV*RLHYGG
Trigger: GCCTCCATAATGCAGCCTCCAAACTGCACAAATTGA...TCCAGCCAGACGCCCTACACACTCAACTTCAGCTTCGAAGAGCTGAACACGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp AAGCGTGTTCAGCTCTTCGAAGCTGAAGTTGAGTGTGTAGGGCGTCTGGCTGGAAATCTTCTCATGGTCTaGGGACTGATGTCACTGAAC +
Preference number: 4 (lower is better)
Translates to: KRVQLFEAEVECVGRLAGNLLMV*GLMSLN
Trigger: GTTCAGTGACATCAGTCCCCAGACCATGAGAAGATT...TCCAGCCAGACGCCCTACACACTCAACTTCAGCTTCGAAGAGCTGAACACGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp AGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGAATCTTCTCATGGTCTaGGGACTGATGTCACTGAAC +
Preference number: 4 (lower is better)
Translates to: SLHASSPVGNPHQRLVAKNLLMV*GLMSLN
Trigger: GTTCAGTGACATCAGTCCCCAGACCATGAGAAGATT...CTTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAACCCTCGAGGAGTCTGTaGGTGAAGAAAGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKPSRSL*VKKAPQ
Trigger: CTGAGGGGCTTTCTTCACCCACAGACTCCTCGAGGG...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256707.8
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCCCATCATCGGGCTTTaGTTCACTATCCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSPIIGL*FTILPL
Trigger: AAGGGGAAGGATAGTGAACCAAAGCCCGATGATGGG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp TCTTTGGGATTTCTTAAAAGCAGTTCTGCCAGTTTCCGGCTCCTTCCACGAATAGCCACTCAGGCTATGTaGGATTCCCCGCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SLGFLKSSSASFRLLPRIATQAM*DSPLSA
Trigger: AGCGGAAAGCGGGGAATCCCACATAGCCTGAGTGGC...TATTCGTGGAAGGAGCCGGAAACTGGCAGAACTGCTTTTAAGAAATCCCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGGTGATGGGCGTGGATaGAGTCAAAATCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSGDGRG*SQNPGQ
Trigger: TTGTCCTGGATTTTGACTCCATCCACGCCCATCACC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp CACCACAGGACTACTCCATTACCCTCGAGGAGTCTGTGGGTGAAGAAAGCCCCTGTATGGGGCAAAGAATaGCTTAAGAGAACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: HHRTTPLPSRSLWVKKAPVWGKE*LKRTVP
Trigger: TGGAACTGTTCTCTTAAGCCATTCTTTGCCCCATAC...AGGGGCTTTCTTCACCCACAGACTCCTCGAGGGTAATGGAGTAGTCCTGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGGAGGCCTAGGTGGGTaGATCATGAGGTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKGGLGG*IMRSGD
Trigger: GTCTCCTGACCTCATGATCCACCCACCTAGGCCTCC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGATTTCCCATGCACCCTaGCAGCTCAGCAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: VKLHLSPILNLTCLWEAEISHAP*QLSRSP
Trigger: TGGACTCCTGCTGAGCTGCCAGGGTGCATGGGAAAT...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTTCACACATTCCAAATaGCCCTTTCGTGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSFTHSK*PFRAAQ
Trigger: TTGGGCTGCACGAAAGGGTCATTTGGAATGTGTGAA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGATTCACACATTCCAAATaGCCCTTTCGTGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: FENVVSYDHTGYTQAWARFTHSK*PFRAAQ
Trigger: TTGGGCTGCACGAAAGGGTCATTTGGAATGTGTGAA...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp AGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGCACTACAGATGCGATTaGTATGAGGACAGCATTTAC +
Preference number: 4 (lower is better)
Translates to: SLHASSPVGNPHQRLVAKHYRCD*YEDSIY
Trigger: GTAAATGCTGTCCTCATATCAATCGCATCTGTAGTG...CTTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGAGGACATCTGGCGAGTaGTGGTCCTCTGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISRTSGE*WSSASA
Trigger: GGCAGATGCAGAGGACCATCACTCGCCAGATGTCCT...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCCAGTCCTCCAATACTaGTCTGCTCTCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSPVLQY*SALWQH
Trigger: GTGCTGCCAGAGAGCAGATCAGTATTGGAGGACTGG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGCTGTATCCAGTCCTCCAATACTaGTCTGCTCTCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: DPAQSPYVPPLMQSSKLYPVLQY*SALWQH
Trigger: GTGCTGCCAGAGAGCAGATCAGTATTGGAGGACTGG...ATACAGCTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAGCTGTGAGGCTGTGGTaGCACCACTCCACCTGCGAA +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVAVRLW*HHSTCE
Trigger: TTCGCAGGTGGAGTGGTGTCACCACAGCCTCACAGC...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTCTAGGCCATTGTTCTaGTCTCTGGGCAAACTCGTT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSSRPLF*SLGKLV
Trigger: AACGAGTTTGCCCAGAGATCAGAACAATGGCCTAGA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256707.8
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCTAGTACTGTGCTTCTaGAAAGGTGCCAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSLVLCF*KGASLQ
Trigger: TTGGAGACTGGCACCTTTTCAGAAGCACAGTACTAG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACTGGAGAGCTCGGTGTaGGGCAGCTCGTTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVLESSV*GSSLWE
Trigger: TTCCCACAACGAGCTGCCTCACACCGAGCTCTCCAG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTCATCTTCCAGCTCTATaGGATTTGCCTTTTCAAGCT +
Preference number: 4 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVHLPAL*DLPFQA
Trigger: AGCTTGAAAAGGCAAATCTCATAGAGCTGGAAGATG...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGAGCCTTGTGTAACTTaGACGTTGGCTTCGCTTATG +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSEPCVT*TLASLM
Trigger: CATAAGCGAAGCCAACGTTCAAGTTACACAAGGCTC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGCCAACAAGTATTTACTaGATGTCCACTGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SLHASSPVGNPHQRLVAKPTSIY*MSTGFL
Trigger: CAGAAAGCCAGTGGACATTCAGTAAATACTTGTTGG...CTTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp AGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGCAAAACAGAAAGCCTTaGAGAGACTCCAAACCCTAT +
Preference number: 4 (lower is better)
Translates to: SLHASSPVGNPHQRLVAKQNRKP*RDSKPY
Trigger: ATAGGGTTTGGAGTCTCTTCAAGGCTTTCTGTTTTG...CTTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCGCAAGAGACGGCGACTaGAAGCGCGTCGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCARDGD*KRVALT
Trigger: GGTGAGGGCGACGCGCTTGCAGTCGCCGTCTCTTGC...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTACGGCCTTTGTAACATaGCCACATAAGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSTAFVT*PHKSCP
Trigger: TGGACAGCTCTTATGTGGGCATGTTACAAAGGCCGT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGCGTCGAGCAGATCCTaGACAATCTCCGTATGTCCC +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKASSRS*TISVCP
Trigger: GGGACATACGGAGATTGTGCAGGATCTGCTCGACGC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGCGTCGAGCAGATCCTaGACAATCTCCGTATGTCCC +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKASSRS*TISVCP
Trigger: GGGACATACGGAGATTGTGCAGGATCTGCTCGACGC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp AAGCGTGTTCAGCTCTTCGAAGCTGAAGTTGAGTGTGTAGGGCGTCTGGCTGGACCACGAATAGCAATATaGAAGGGAGTATCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: KRVQLFEAEVECVGRLAGPRIAI*KGVSPF
Trigger: GAAAGGAGATACTCCCTTGCATATTGCTATTCGTGG...TCCAGCCAGACGCCCTACACACTCAACTTCAGCTTCGAAGAGCTGAACACGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTAGCATCCGAGAGGGTTaGAATCATTTCAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSSIREG*NHFSQR
Trigger: TCTCTGGCTGAAATGATTGCAACCCTCTCGGATGCT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTGTGCAGTTTGGAGGCTaGATTATGGAGGCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRVQFGG*IMEAFS
Trigger: AGAAAACGCCTCCATAATGCAGCCTCCAAACTGCAC...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp GGAACCATAATTATTAGCATTCAGCTACTCTACACTAGCTGCTCATCACACCACGCTGAGGGCCCGTCATaGCGCTGTAATAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GTIIISIQLLYTSCSSHHAEGPS*RCNSCC
Trigger: ACAGCAGCTATTACAGCGGCATGACGGGCCCTCAGC...GTGGTGTGATGAGCAGCTAGTGTAGAGTAGCTGAATGCTAATAATTATGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTGCTGGCTATCAAGCTaGATTCGGAAGGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSCWLSS*IRKGFS
Trigger: AGAAAAGCCCTTCCGAATGCAGCTTGATAGCCAGCA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp CGAGCAGATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGGTAGGCTTTCTGGCATaGAGGCCAGTTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RADPAQSPYVPPLMQSSKVGFLA*RPVFFR
Trigger: CCTGAAGAAAACTGGCCTGCATGCCAGAAAGCCTAC...CTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATCTGCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGGTGATCACCACTCACTaGATCCTCAACCTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VKLHLSPILNLTCLWEAEVITTH*ILNLSG
Trigger: GCCTGAGAGGTTGAGGATGCAGTGAGTGGTGATCAC...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCAGACCAGTGACACTTaGATTGGCACCATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSQTSDT*IGTMRK
Trigger: CTTTCTCATGGTGCCAATCCAAGTGTCACTGGTCTG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAACCCCACACAAATGGGTaGCTGCATGGTAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKPHTNG*LHGRLT
Trigger: AGTGAGCCTACCATGCAGCCACCCATTTGTGTGGGG...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCCCCCACACAAATGGGTaGCTGCATGGTAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLPHTNG*LHGRLT
Trigger: AGTGAGCCTACCATGCAGCCACCCATTTGTGTGGGG...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCCCCACACAAATGGGTaGCTGCATGGTAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSPHTNG*LHGRLT
Trigger: AGTGAGCCTACCATGCAGCCACCCATTTGTGTGGGG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp CATCCCGAGCCCATTAATACTGATAGAGATACAACTCCACATAACCACGCCATACCCCACACAAATGGGTaGCTGCATGGTAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: HPEPINTDRDTTPHNHAIPHTNG*LHGRLT
Trigger: AGTGAGCCTACCATGCAGCCACCCATTTGTGTGGGG...TATGGCGTGGTTATGTGGAGTTGTATCTCTATCAGTATTAATGGGCTCGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp AAACAGAACTCGGACAGTGTCCAGCATCTGAAGGACTTTGTCCTGCTCACAGGCTTGGAGGCTGCATTATaGAGGCGTTTTCTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: KQNSDSVQHLKDFVLLTGLEAAL*RRFLWE
Trigger: TTCCCAAAGAAAACGCCTCCATAATGCAGCCTCCAA...GCCTGTGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGTCCGAGTTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp CACCACAGGACTACTCCATTACCCTCGAGGAGTCTGTGGGTGAAGAAAGCCCCTCATTGTTCTGATCTCTaGGCAAACTCGTTTTTACTG +
Preference number: 4 (lower is better)
Translates to: HHRTTPLPSRSLWVKKAPHCSDL*ANSFLL
Trigger: CAGTAAAAACGAGTTTGCCCAGAGATCAGAACAATG...AGGGGCTTTCTTCACCCACAGACTCCTCGAGGGTAATGGAGTAGTCCTGTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCTCACTGAGGAAACGTaGGTCTTCAGGGACCACGTG +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKLTEET*VFRDHV
Trigger: CACGTGGTCCCTGAAGACCCACGTTTCCTCAGTGAG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTTTGCCTTTTCAAGCTaGGAGTCATCCGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSFAFSS*ESSATS
Trigger: TGAAGTGGCGGATGACTCCCAGCTTGAAAAGGCAAA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGATGCTTCATCGCCTGTaGGGAATCCTCATCAGCGTC +
Preference number: 4 (lower is better)
Translates to: VKLHLSPILNLTCLWEAEMLHRL*GILISV
Trigger: GACGCTGATGAGGATTCCCCACAGGCGATGAAGCAT...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp CATCCCGAGCCCATTAATACTGATAGAGATACAACTCCACATAACCACGCCATACAACATGACCACCTCTaGCAGCGCCAATCAACACAG +
Preference number: 4 (lower is better)
Translates to: HPEPINTDRDTTPHNHAIQHDHL*QRQSTQ
Trigger: CTGTGTTGATTGGCGCTGTCAGAGGTGGTCATGTTG...TATGGCGTGGTTATGTGGAGTTGTATCTCTATCAGTATTAATGGGCTCGGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTAAACACTATGAGCCATaGGAACTGAAAGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSKHYEP*ELKERL
Trigger: GAGCCTCTCTTTCAGTTCTCATGGCTCATAGTGTTT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTAATGAACGGGCCTTTTaGAAACAGAACTCGGACAGT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSNERAF*KQNSDS
Trigger: ACTGTCCGAGTTCTGTTTTCAAAAGGCCCGTTCATT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGCTTCCAAATATAATATaGGCCATGAAGTCCGGTATG +
Preference number: 4 (lower is better)
Translates to: SLHASSPVGNPHQRLVAKLPNII*AMKSGM
Trigger: CATACCGGACTTCATGGCTCATATTATATTTGGAAG...CTTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp AGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGAAGAACTGGGGTCCTTaGAGACAAAAACACTTCAAA +
Preference number: 4 (lower is better)
Translates to: SLHASSPVGNPHQRLVAKKNWGP*RQKHFK
Trigger: TTTGAAGTGTTTTTGTCTTCAAGGACCCCAGTTCTT...CTTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GGAACCATAATTATTAGCATTCAGCTACTCTACACTAGCTGCTCATCACACCACCCAGTCCTCCAATACTaGTCTGCTCTCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GTIIISIQLLYTSCSSHHPVLQY*SALWQH
Trigger: GTGCTGCCAGAGAGCAGATCAGTATTGGAGGACTGG...GTGGTGTGATGAGCAGCTAGTGTAGAGTAGCTGAATGCTAATAATTATGGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR TCA 90 bp ACATGTGTAATAGCAACCACAGGCTTAACAAAAACAGTCAAAGGCAAAGCTAGAGCTGTGAGGCTGTGGTaGCACCACTCCACCTGCGAA +
Preference number: 4 (lower is better)
Translates to: TCVIATTGLTKTVKGKARAVRLW*HHSTCE
Trigger: TTCGCAGGTGGAGTGGTGTCACCACAGCCTCACAGC...TCTAGCTTTGCCTTTGACTGTTTTTGTTAAGCCTGTGGTTGCTATTACACATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTGTCTGGAAGAGGCTTaGCCTTTCGGAAGATTTCTT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSCLEEA*PFGRFL
Trigger: AAGAAATCTTCCGAAAGGTCAAGCCTCTTCCAGACA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTAGTTCCTCTACGATGTaGACATGCCCTTCTTTCGAT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSSSSTM*TCPSFD
Trigger: ATCGAAAGAAGGGCATGTGCACATCGTAGAGGAACT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTAGTTCCTCTACGATGTaGACATGCCCTTCTTTCGAT +
Preference number: 4 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRSSSTM*TCPSFD
Trigger: ATCGAAAGAAGGGCATGTGCACATCGTAGAGGAACT...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTATAAGGAGTCTCGCCTaGTTTGTTGGGCCTATAAAG +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSIRSLA*FVGPIK
Trigger: CTTTATAGGCCCAACAAAGCAGGCGAGACTCCTTAT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGAAAAGCTTTAGTAGTCTaGTCTGGCAACTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: FENVVSYDHTGYTQAWARKALVV*SGNSGG
Trigger: TCCACCTGAGTTGCCAGAGCAGACTACTAAAGCTTT...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp CATCCCGAGCCCATTAATACTGATAGAGATACAACTCCACATAACCACGCCATAAGCGAGTCCAGCACTTaGCACCATGTACGACAGTTC +
Preference number: 4 (lower is better)
Translates to: HPEPINTDRDTTPHNHAISESST*HHVRQF
Trigger: GAACTGTCGTACATGGTGGCAAGTGCTGGACTCGCT...TATGGCGTGGTTATGTGGAGTTGTATCTCTATCAGTATTAATGGGCTCGGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGCTGTCAATGGTTTTTaGCATCCTGGCCATCAATTC +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSAVNGF*HPGHQF
Trigger: GAATTGATGGCCAGGATGGCAAAAACCATTGACAGC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGTCCGGTATGGCCACTaGTCAGTAAGGTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKVRYGH*SVRLIQ
Trigger: CTGGATCAACCTTACTGAGCAGTGGCCATACCGGAC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp AAACAGTCAAAGGCAAAGCTAGAGCTCACACTGAGGAGCAAATACTACCAACGGCCTCCAATACTGATCTaGTCTCTGGCAGCACGAACA +
Preference number: 4 (lower is better)
Translates to: KQSKAKLELTLRSKYYQRPPILI*SLAART
Trigger: TGTTCGTGCTGCCAGAGAGCAGATCAGTATTGGAGG...CCGTTGGTAGTATTTGCTCCTCAGTGTGAGCTCTAGCTTTGCCTTTGACTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGCCGCTGTAATAGCTaGTGTGAGGCTGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKCRCNS*CEAVVT
Trigger: TGTCACCACAGCCTCACAGCAGCTATTACAGCGGCA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTGCCGCTGTAATAGCTaGTGTGAGGCTGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSCRCNS*CEAVVT
Trigger: TGTCACCACAGCCTCACAGCAGCTATTACAGCGGCA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAGCTGAGGGCCCGTCATaGCGCTGTAATAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVAEGPS*RCNSCC
Trigger: ACAGCAGCTATTACAGCGGCATGACGGGCCCTCAGC...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp AAGCGTGTTCAGCTCTTCGAAGCTGAAGTTGAGTGTGTAGGGCGTCTGGCTGGAACGGCCATTTATGTTTaGCTTTTTGATCGTGGTACA +
Preference number: 4 (lower is better)
Translates to: KRVQLFEAEVECVGRLAGTAIYV*LFDRGT
Trigger: TGTACCACGATCAAAAAGGCAAACATAAATGGCCGT...TCCAGCCAGACGCCCTACACACTCAACTTCAGCTTCGAAGAGCTGAACACGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCAGCTCTATGAGATTTaGCTTTTCAAGCTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSQLYEI*LFKLGV
Trigger: GACTCCCAGCTTGAAAAGGCAAATCTCATAGAGCTG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGCTATAATTGGATCTTaGAGGCCACTCAGGCTATGT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSAIIGS*RPLRLC
Trigger: ACATAGCCTGAGTGGCCTGCAAGATCCAATTATAGC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTAGTTTTCTTCAGGGCTaGTGGCTATCAAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSSFLQG*WLSSCI
Trigger: AATGCAGCTTGATAGCCAGCAGCCCTGAAGAAAACT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTGTTCAGAGTCACGGTaGTGGGAGTTCGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKCSESR*WEFGSG
Trigger: ACCTGAACCGAACTCCCAGCACCGTGACTCTGAACA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTTCAGAGTCACGGTaGTGGGAGTTCGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKCSESR*WEFGSG
Trigger: ACCTGAACCGAACTCCCAGCACCGTGACTCTGAACA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACTCAGAAGAGGCTGCTaGATGGAGCTCCGGAGGATC +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVLRRGC*MELRRI
Trigger: GATCCTCCGGAGCTCCATGCAGCAGCCTCTTCTGAG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TCTTTGGGATTTCTTAAAAGCAGTTCTGCCAGTTTCCGGCTCCTTCCACGAATACTTCTCCAAAGCCTGTaGTCTCAGAAGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLGFLKSSSASFRLLPRILLQSL*SQKRLL
Trigger: CAGCAGCCTCTTCTGAGAGCACAGGCTTTGGAGAAG...TATTCGTGGAAGGAGCCGGAAACTGGCAGAACTGCTTTTAAGAAATCCCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp CATCCCGAGCCCATTAATACTGATAGAGATACAACTCCACATAACCACGCCATATCTCCCACGTTCAAGTaGTTCTCTTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: HPEPINTDRDTTPHNHAISPTFK*FSCLSL
Trigger: GAGGCTGAGGCAAGAGAAGCACTTGAACGTGGGAGA...TATGGCGTGGTTATGTGGAGTTGTATCTCTATCAGTATTAATGGGCTCGGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTATCATCAGTGGAGTCTaGCCACACTCATTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSIISGV*PHSFLS
Trigger: TGAGAGAAATGAGTGTGGCCAGACTCCACTGATGAT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256707.8
ENST00000473731.5
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTGCTGCCCAAATGATTaGGTAAACACTGTACAGACC +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSCCPND*VNTVQT
Trigger: GGTCTGTACAGTGTTTACCCAATCATTTGGGCAGCA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTTGGAGGCTGCATTATaGAGGCGTTTTCTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSLEAAL*RRFLWE
Trigger: TTCCCAAAGAAAACGCCTCCATAATGCAGCCTCCAA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTGGTTTTTGCCATCCTaGCCATCAATTCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSWFLPS*PSIPLH
Trigger: GTGAAGTGGAATTGATGGCCAGGATGGCAAAAACCA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTTGGTTTTTGCCATCCTaGCCATCAATTCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRWFLPS*PSIPLH
Trigger: GTGAAGTGGAATTGATGGCCAGGATGGCAAAAACCA...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGAGATCAAAGGACATCTaGCGAGTGATGGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VKLHLSPILNLTCLWEAERSKDI*RVMVLC
Trigger: GCAGAGGACCATCACTCGCCAGATGTCCTTTGATCT...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTAATCTTCTCATGGTCTaGGGACTGATGTCACTGAAC +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSNLLMV*GLMSLN
Trigger: GTTCAGTGACATCAGTCCCCAGACCATGAGAAGATT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGCCAGGGTAATACCTTaGCGTGTAAAGGTATGGGGC +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKARVIP*RVKVWG
Trigger: GCCCCATACCTTTACACGCCAAGGTATTACCCTGGC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256707.8
ENST00000473731.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGCCAGGGTAATACCTTaGCGTGTAAAGGTATGGGGC +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSARVIP*RVKVWG
Trigger: GCCCCATACCTTTACACGCCAAGGTATTACCCTGGC...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256707.8
ENST00000473731.5
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTAGCTTCAAATCTGTCTaGAAGAGGCTTGACCTTTCG +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSSFKSV*KRLDLS
Trigger: CGAAAGGTCAAGCCTCTTCCAGACAGATTTGAAGCT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCTCAGCACTGTGTTCTaGAGACTTCGGCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSLSTVF*RLRHSL
Trigger: GAGAGAGTGCCGAAGTCTCCAGAACACAGTGCTGAG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp TCTTTGGGATTTCTTAAAAGCAGTTCTGCCAGTTTCCGGCTCCTTCCACGAATACTCAGCACTGTGTTCTaGAGACTTCGGCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: SLGFLKSSSASFRLLPRILSTVF*RLRHSL
Trigger: GAGAGAGTGCCGAAGTCTCCAGAACACAGTGCTGAG...TATTCGTGGAAGGAGCCGGAAACTGGCAGAACTGCTTTTAAGAAATCCCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAGCCACTCAGGCTATGTaGGATTCCCCGCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVATQAM*DSPLSA
Trigger: AGCGGAAAGCGGGGAATCCCACATAGCCTGAGTGGC...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATCAGAGTCACGGTGCTaGGAGTTCGGTTCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKSESRC*EFGSGC
Trigger: ACAACCTGAACCGAACTCCCAGCACCGTGACTCTGA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp TTGCTTAGTCCACGACTATTAAGGAACACAGGCAAGTGGACTATGTTGCGCATGGCTCCGGAGGATCTTTaGAGAGCCTTGTGTAACTTG +
Preference number: 4 (lower is better)
Translates to: LLSPRLLRNTGKWTMLRMAPEDL*RALCNL
Trigger: CAAGTTACACAAGGCTCTCCAAAGATCCTCCGGAGC...CATGCGCAACATAGTCCACTTGCCTGTGTTCCTTAATAGTCGTGGACTAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCGAACAATTTCAACATaGCCACCTCTGACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSRTIST*PPLTAP
Trigger: TGGCGCTGTCAGAGGTGGTCATGTTGAAATTGTTCG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCGAACAATTTCAACATaGCCACCTCTGACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKRTIST*PPLTAP
Trigger: TGGCGCTGTCAGAGGTGGTCATGTTGAAATTGTTCG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTACAGTGTCCAGCATCTaGAGGACTTTGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSTVSSI*RTLSCS
Trigger: TGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGT...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAACAGTGTCCAGCATCTaGAGGACTTTGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKTVSSI*RTLSCS
Trigger: TGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAAAGTGTCCCGTCTATTaGGGGCTGTCTTGCTACCAA +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKKCPVY*GLSCYQ
Trigger: TTGGTAGCAAGACAGCCCTCAATAGACGGGACACTT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GTGGAGTCTGGCCACAAATATTTATACAAAACTGTATTAGCACCTAAAATGTCCGCTGTGAGGCTGTGGTaGCACCACTCCACCTGCGAA +
Preference number: 4 (lower is better)
Translates to: VESGHKYLYKTVLAPKMSAVRLW*HHSTCE
Trigger: TTCGCAGGTGGAGTGGTGTCACCACAGCCTCACAGC...GGACATTTTAGGTGCTAATACAGTTTTGTATAAATATTTGTGGCCAGACTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAATCGTGGTACAATACTaGGGCAGCATACTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKIVVQY*GSILWS
Trigger: GGACCAGAGTATGCTGCCTCAGTATTGTACCACGAT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGCTGTATCAACTTAGATTACTGTaGCGAGGGGCACCTTCATCC +
Preference number: 4 (lower is better)
Translates to: DPAQSPYVPPLMQSSKLYQLRLL*RGAPSS
Trigger: GGATGAAGGTGCCCCTCGTCACAGTAATCTAAGTTG...ATACAGCTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTGGAATCCTGGGAATTaGGACTCGAAAGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKWNPGN*DSKDLG
Trigger: CCCCAAGTCTTTCGAGTCTCAATTCCCAGGATTCCA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTGTCTTTGTCATCTTTaGGCAGTGGAGTGTTATCTG +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSCLCHL*AVECYL
Trigger: CAGATAACACTCCACTGCTCAAAGATGACAAAGACA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCATCTTCCAGCTCTATaGGATTTGCCTTTTCAAGCT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSHLPAL*DLPFQA
Trigger: AGCTTGAAAAGGCAAATCTCATAGAGCTGGAAGATG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTATCTCATCGAAATTTTaGTTGGCTCTGTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSISSKF*LALLAG
Trigger: TCCAGCCAACAGAGCCAATCAAAATTTCGATGAGAT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCTGTACTGCAGACCAGTaGCACTTGGATTGGCACCAT +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLCTADQ*HLDWHH
Trigger: ATGGTGCCAATCCAAGTGTCACTGGTCTGCAGTACA...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCCTAGGCCATTGTTCTaGTCTCTGGGCAAACTCGTT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKPRPLF*SLGKLV
Trigger: AACGAGTTTGCCCAGAGATCAGAACAATGGCCTAGG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473731.5
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTCACTATTTCCAGATTaGCTTGTTCGGCAGCTATCA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSSLFPD*LVRQLS
Trigger: TGATAGCTGCCGAACAAGGCAATCTGGAAATAGTGA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCCTCCCATATCACGGTaGTCCAAGTTAACCCCACAT +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSPPISR*SKLTPH
Trigger: ATGTGGGGTTAACTTGGAGCACCGTGATATGGGAGG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCCTCCCATATCACGGTaGTCCAAGTTAACCCCACAT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKPPISR*SKLTPH
Trigger: ATGTGGGGTTAACTTGGAGCACCGTGATATGGGAGG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGACGGCCTTTGTAACATaGCCACATAAGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VKLHLSPILNLTCLWEAETAFVT*PHKSCP
Trigger: TGGACAGCTCTTATGTGGGCATGTTACAAAGGCCGT...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGATGGCCTCTCCCTGCTaGCCAAATGATTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKMASPC*PNDWVN
Trigger: GTTTACCCAATCATTTGGGCAGCAGGGAGAGGCCAT...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCATGGCCTCTCCCTGCTaGCCAAATGATTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLMASPC*PNDWVN
Trigger: GTTTACCCAATCATTTGGGCAGCAGGGAGAGGCCAT...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAATGGCCTCTCCCTGCTaGCCAAATGATTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKMASPC*PNDWVN
Trigger: GTTTACCCAATCATTTGGGCAGCAGGGAGAGGCCAT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp ATACTCTTTGGCTTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTGGAGAATGGCCTCTCCCTGCTaGCCAAATGATTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: ILFGFNEGSDRLSTVFWRMASPC*PNDWVN
Trigger: GTTTACCCAATCATTTGGGCAGCAGGGAGAGGCCAT...TCTCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAAGCCAAAGAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCCACGAATAGCAATATaGAAGGGAGTATCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSPRIAI*KGVSPF
Trigger: GAAAGGAGATACTCCCTTGCATATTGCTATTCGTGG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCCACGAATAGCAATATaGAAGGGAGTATCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRPRIAI*KGVSPF
Trigger: GAAAGGAGATACTCCCTTGCATATTGCTATTCGTGG...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp AAACAGAACTCGGACAGTGTCCAGCATCTGAAGGACTTTGTCCTGCTCACAGGCGTGCTTCTGAAAAGGTaGCAGTCTCCAAAATTCATA +
Preference number: 4 (lower is better)
Translates to: KQNSDSVQHLKDFVLLTGVLLKR*QSPKFI
Trigger: TATGAATTTTGGAGACTGGCACCTTTTCAGAAGCAC...GCCTGTGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGTCCGAGTTCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGACCCATGTAATATGTaGTATGTGGAGAAGATCTGC +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSDPCNM*YVEKIC
Trigger: GCAGATCTTCTCCACATAGCACATATTACATGGGTC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCTGGGAGAAGCTTACTaGCTGACTGATCTGATTTTT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSLGEAY*LTDLIF
Trigger: AAAAATCAGATCAGTCAGGCAGTAAGCTTCTCCCAG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGATTCTTCTGTaGCAGATTCATCCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSYLILL*QIHPRH
Trigger: GTGACGAGGATGAATCTGGCACAGAAGAATCAGATA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp CGAGCAGATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGCAGCTCTATGAGATTTaGCTTTTCAAGCTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: RADPAQSPYVPPLMQSSKQLYEI*LFKLGV
Trigger: GACTCCCAGCTTGAAAAGGCAAATCTCATAGAGCTG...CTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATCTGCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTAGGCTTTCTGGCATaGAGGCCAGTTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSVGFLA*RPVFFR
Trigger: CCTGAAGAAAACTGGCCTGCATGCCAGAAAGCCTAC...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGTAGGCTTTCTGGCATaGAGGCCAGTTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKVGFLA*RPVFFR
Trigger: CCTGAAGAAAACTGGCCTGCATGCCAGAAAGCCTAC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp AAGCGTGTTCAGCTCTTCGAAGCTGAAGTTGAGTGTGTAGGGCGTCTGGCTGGAGCACCTAAAATGTCCTaGCAAATAATAATAGCTTGG +
Preference number: 4 (lower is better)
Translates to: KRVQLFEAEVECVGRLAGAPKMS*QIIIAW
Trigger: CCAAGCTATTATTATTTGGCAGGACATTTTAGGTGC...TCCAGCCAGACGCCCTACACACTCAACTTCAGCTTCGAAGAGCTGAACACGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGGCAGCTATCATCAGTaGAGTCTGGCCACACTCATT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKGSYHQ*SLATLI
Trigger: AATGAGTGTGGCCAGACTCCACTGATGATAGCTGCC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256707.8
ENST00000473731.5
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGGCAGCTATCATCAGTaGAGTCTGGCCACACTCATT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKGSYHQ*SLATLI
Trigger: AATGAGTGTGGCCAGACTCCACTGATGATAGCTGCC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256707.8
ENST00000473731.5
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGGTAGCCTTTATAAGTaGCGTTTCACCATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSGSLYK*RFTILC
Trigger: ACAAAGGATGGTGAAACGCCACTTATAAAGGCTACC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTATTCCAAGATTTGGGTaGACCGTGAAGGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSIPRFG*TVKANN
Trigger: ATTGTTTGCCTTCACGGTCCACCCAAATCTTGGAAT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTGGAGGCGTTTTCTTTaGGAATTCAGGAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSWRRFL*EFRSES
Trigger: GGACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp CGAGCAGATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGTGGTTTTTGCCATCCTaGCCATCAATTCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: RADPAQSPYVPPLMQSSKWFLPS*PSIPLH
Trigger: GTGAAGTGGAATTGATGGCCAGGATGGCAAAAACCA...CTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATCTGCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTAGATCAAAGGACATCTaGCGAGTGATGGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSRSKDI*RVMVLC
Trigger: GCAGAGGACCATCACTCGCCAGATGTCCTTTGATCT...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACTCACTGAGGAAACGTaGGTCTTCAGGGACCACGTG +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVLTEET*VFRDHV
Trigger: CACGTGGTCCCTGAAGACCCACGTTTCCTCAGTGAG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCCCATCATCGGGCTTTaGTTCACTATCCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSPIIGL*FTILPL
Trigger: AAGGGGAAGGATAGTGAACCAAAGCCCGATGATGGG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTTTCTTCAGGGCTGCTaGCTATCAAGCTGCATTCGG +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKFLQGC*LSSCIR
Trigger: CCGAATGCAGCTTGATAGCCAGCAGCCCTGAAGAAA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATTTCTTCAGGGCTGCTaGCTATCAAGCTGCATTCGG +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKFLQGC*LSSCIR
Trigger: CCGAATGCAGCTTGATAGCCAGCAGCCCTGAAGAAA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTTTGATTGGCTCTGTTaGCTGGAGCACTATTGTTGT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSFDWLC*LEHYCC
Trigger: ACAACAATAGTGCTCCAGCCAACAGAGCCAATCAAA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGCTCCGGAGGATCTTTaGAGAGCCTTGTGTAACTTG +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKAPEDL*RALCNL
Trigger: CAAGTTACACAAGGCTCTCCAAAGATCCTCCGGAGC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGGTGATGGGCGTGGATaGAGTCAAAATCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSGDGRG*SQNPGQ
Trigger: TTGTCCTGGATTTTGACTCCATCCACGCCCATCACC...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGCCATACAGAACGCTaGATCTCGGTTTACTCAGCC +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKCHTER*ISVYSA
Trigger: GGCTGAGTAAACCGAGATCCAGCGTTCTGTATGGCA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTCTGTCGCCCAGGTTaGAGTGCAGCGGTGCGATCT +
Preference number: 4 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCLCRPG*SAAVRS
Trigger: AGATCGCACCGCTGCACTCCAACCTGGGCGACAGAG...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 72 bp TTCTGTGCCAGATTCATCCTCGTCACTTGGGAGTTTTaGATAGCGCAGCCCACTTCCCTTAAGCTTCAAATC +
Preference number: 4 (lower is better)
Translates to: FCARFILVTWEF*IAQPTSLKLQI
Trigger: GATTTGAAGCTTAAGGGAAGTGGGCTGCGCTATCAAAAACTCCCAAGTGACGAGGATGAATCTGGCACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CAA 72 bp GGAGCTCCGGAGGATCTTTGGAGAGCCTTGTGTAACTaGAACGTTGGCTTCGCTTATGTGTCATGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: GAPEDLWRALCN*NVGFAYVSCFL
Trigger: TAAAAAGCATGACACATAAGCGAAGCCAACGTTCAAGTTACACAAGGCTCTCCAAAGATCCTCCGGAGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATCCCTGCTGCCCAAATaGTTGGGTAAACACTGTACA +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKSLLPK*LGKHCT
Trigger: TGTACAGTGTTTACCCAATCATTTGGGCAGCAGGGA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp CATCCCGAGCCCATTAATACTGATAGAGATACAACTCCACATAACCACGCCATATCCCTGCTGCCCAAATaGTTGGGTAAACACTGTACA +
Preference number: 4 (lower is better)
Translates to: HPEPINTDRDTTPHNHAISLLPK*LGKHCT
Trigger: TGTACAGTGTTTACCCAATCATTTGGGCAGCAGGGA...TATGGCGTGGTTATGTGGAGTTGTATCTCTATCAGTATTAATGGGCTCGGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTTCACACATTCCAAATaGCCCTTTCGTGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSFTHSK*PFRAAQ
Trigger: TTGGGCTGCACGAAAGGGTCATTTGGAATGTGTGAA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGAATTAGCTCCTTCTTaGTCCACATCAGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSELAPS*STSAPM
Trigger: CATGGGAGCTGATGTGGATCAAGAAGGAGCTAATTC...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGAATTAGCTCCTTCTTaGTCCACATCAGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKELAPS*STSAPM
Trigger: CATGGGAGCTGATGTGGATCAAGAAGGAGCTAATTC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACAACATGACCACCTCTaGCAGCGCCAATCAACACAG +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVQHDHL*QRQSTQ
Trigger: CTGTGTTGATTGGCGCTGTCAGAGGTGGTCATGTTG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATAGGACATCTGGCGAGTaGTGGTCCTCTGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNRTSGE*WSSASA
Trigger: GGCAGATGCAGAGGACCATCACTCGCCAGATGTCCT...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCTAGTACTGTGCTTCTaGAAAGGTGCCAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKLVLCF*KGASLQ
Trigger: TTGGAGACTGGCACCTTTTCAGAAGCACAGTACTAG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTTTAGATTCTCATTCTaGATAGTGGTTGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSFRFSF*IVVGLG
Trigger: TCCCAACCCAACCACTATTCAGAATGAGAATCTAAA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGAGCCTTGTGTAACTTaGACGTTGGCTTCGCTTATG +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSEPCVT*TLASLM
Trigger: CATAAGCGAAGCCAACGTTCAAGTTACACAAGGCTC...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp CCAGAAATTTCTGGCTATAAACAAGTCAACATTTCTTCGCTGAGACTGCTAGTCCCAACGGAACACCCCTaGCAGCTGATAGAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: PEISGYKQVNISSLRLLVPTEHP*QLIEKA
Trigger: GGCTTTTTCTATCAGCTGTCAGGGGTGTTCCGTTGG...GACTAGCAGTCTCAGCGAAGAAATGTTGACTTGTTTATAGCCAGAAATTTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR TCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGAGTCAACTGTGAGAAGTaGCTCGAACTTAGTTTAATC +
Preference number: 4 (lower is better)
Translates to: FENVVSYDHTGYTQAWARVNCEK*LELSLI
Trigger: GATTAAACTAAGTTCGAGTCACTTCTCACAGTTGAC...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GATCTAGGATTTGGTCTAAAAGATATCTCGAGGCTCTTTCCCAATCTATTGCTCGGACAGCAGGATTACTaGGTAGTAGGTAGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: DLGFGLKDISRLFPNLLLGQQDY*VVGRPS
Trigger: ACTCGGCCTACCTACTACTCAGTAATCCTGCTGTCC...GAGCAATAGATTGGGAAAGAGCCTCGAGATATCTTTTAGACCAAATCCTAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGTTTCCCACTGGCTGCTaGGGTGGAAGATGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISFPTGC*GGRCVS
Trigger: AGAAACACATCTTCCACCTCAGCAGCCAGTGGGAAA...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTACGGCCTTTGTAACATaGCCACATAAGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSTAFVT*PHKSCP
Trigger: TGGACAGCTCTTATGTGGGCATGTTACAAAGGCCGT...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGGCGTCGAGCAGATCCTaGACAATCTCCGTATGTCCC +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKASSRS*TISVCP
Trigger: GGGACATACGGAGATTGTGCAGGATCTGCTCGACGC...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp GAGTTAAAATACTCTTCTGATGGCTACAGTCAATATTATAAGGAGTCTCGCCTGGCGTCGAGCAGATCCTaGACAATCTCCGTATGTCCC +
Preference number: 4 (lower is better)
Translates to: ELKYSSDGYSQYYKESRLASSRS*TISVCP
Trigger: GGGACATACGGAGATTGTGCAGGATCTGCTCGACGC...CAGGCGAGACTCCTTATAATATTGACTGTAGCCATCAGAAGAGTATTTTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp TTGCTTAGTCCACGACTATTAAGGAACACAGGCAAGTGGACTATGTTGCGCATGATAAGGAGTCTCGCCTaGTTTGTTGGGCCTATAAAG +
Preference number: 4 (lower is better)
Translates to: LLSPRLLRNTGKWTMLRMIRSLA*FVGPIK
Trigger: CTTTATAGGCCCAACAAAGCAGGCGAGACTCCTTAT...CATGCGCAACATAGTCCACTTGCCTGTGTTCCTTAATAGTCGTGGACTAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTAGCATCCGAGAGGGTTaGAATCATTTCAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSSIREG*NHFSQR
Trigger: TCTCTGGCTGAAATGATTGCAACCCTCTCGGATGCT...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAAGCGAGTCCAGCACTTaGCACCATGTACGACAGTTC +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVSESST*HHVRQF
Trigger: GAACTGTCGTACATGGTGGCAAGTGCTGGACTCGCT...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGTGCAGTTTGGAGGCTaGATTATGGAGGCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKVQFGG*IMEAFS
Trigger: AGAAAACGCCTCCATAATGCAGCCTCCAAACTGCAC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGTGCAGTTTGGAGGCTaGATTATGGAGGCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKVQFGG*IMEAFS
Trigger: AGAAAACGCCTCCATAATGCAGCCTCCAAACTGCAC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGCAAGTGGACTATGTTaGGCATGTAGTCATGGCCAT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKASGLC*ACSHGH
Trigger: ATGGCCATGACTACATGCGCAACATAGTCCACTTGC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGCAAGTGGACTATGTTaGGCATGTAGTCATGGCCAT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKASGLC*ACSHGH
Trigger: ATGGCCATGACTACATGCGCAACATAGTCCACTTGC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAGTCCGGTATGGCCACTaGTCAGTAAGGTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVVRYGH*SVRLIQ
Trigger: CTGGATCAACCTTACTGAGCAGTGGCCATACCGGAC...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp CCAGAAATTTCTGGCTATAAACAAGTCAACATTTCTTCGCTGAGACTGCTAGTCTGCCGCTGTAATAGCTaGTGTGAGGCTGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: PEISGYKQVNISSLRLLVCRCNS*CEAVVT
Trigger: TGTCACCACAGCCTCACAGCAGCTATTACAGCGGCA...GACTAGCAGTCTCAGCGAAGAAATGTTGACTTGTTTATAGCCAGAAATTTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR GCA 90 bp TTATCTAGCAGCAGCTCCACCACTTCAATGTTTCTCATCTTGGTAGCCTTTATATGCCGCTGTAATAGCTaGTGTGAGGCTGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: LSSSSSTTSMFLILVAFICRCNS*CEAVVT
Trigger: TGTCACCACAGCCTCACAGCAGCTATTACAGCGGCA...TATAAAGGCTACCAAGATGAGAAACATTGAAGTGGTGGAGCTGCTGCTAGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp GATCTAGGATTTGGTCTAAAAGATATCTCGAGGCTCTTTCCCAATCTATTGCTCTGCCGCTGTAATAGCTaGTGTGAGGCTGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: DLGFGLKDISRLFPNLLLCRCNS*CEAVVT
Trigger: TGTCACCACAGCCTCACAGCAGCTATTACAGCGGCA...GAGCAATAGATTGGGAAAGAGCCTCGAGATATCTTTTAGACCAAATCCTAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTACGGCCATTTATGTTTaGCTTTTTGATCGTGGTACA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSTAIYV*LFDRGT
Trigger: TGTACCACGATCAAAAAGGCAAACATAAATGGCCGT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGTGCTTCTGAAAAGGTaGCAGTCTCCAAAATTCATA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSVLLKR*QSPKFI
Trigger: TATGAATTTTGGAGACTGGCACCTTTTCAGAAGCAC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp AAAGCCAAACTCTCTTTCACAAGCATCCGAGAGGGTTGCAATCATTTCAGCCAGAGTTTTCTTCAGGGCTaGTGGCTATCAAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: KAKLSFTSIREGCNHFSQSFLQG*WLSSCI
Trigger: AATGCAGCTTGATAGCCAGCAGCCCTGAAGAAAACT...CTGGCTGAAATGATTGCAACCCTCTCGGATGCTTGTGAAAGAGAGTTTGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCTTTATTTGAATACCTaGTCCTCAGCTCCGGCGGAA +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSLYLNT*SSAPAE
Trigger: TTCCGCCGGAGCTGAGGACCAGGTATTCAAATAAAG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256707.8
ENST00000488729.5
CDS-3UTR CCA 90 bp GATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGCTGTATCAGACCAGTGACACTTaGATTGGCACCATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: DPAQSPYVPPLMQSSKLYQTSDT*IGTMRK
Trigger: CTTTCTCATGGTGCCAATCCAAGTGTCACTGGTCTG...ATACAGCTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp TTGCTTAGTCCACGACTATTAAGGAACACAGGCAAGTGGACTATGTTGCGCATGCCACATCAGCTCCCATaGCCAATAAATGTTTCACAC +
Preference number: 4 (lower is better)
Translates to: LLSPRLLRNTGKWTMLRMPHQLP*PINVSH
Trigger: GTGTGAAACATTTATTGGCCATGGGAGCTGATGTGG...CATGCGCAACATAGTCCACTTGCCTGTGTTCCTTAATAGTCGTGGACTAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATCTCGCCTGCTTTGTTaGGCCTATAAAGTAATCGCC +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKSRLLC*AYKVIA
Trigger: GGCGATTACTTTATAGGCCCAACAAAGCAGGCGAGA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTCTCGCCTGCTTTGTTaGGCCTATAAAGTAATCGCC +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSSRLLC*AYKVIA
Trigger: GGCGATTACTTTATAGGCCCAACAAAGCAGGCGAGA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGATTTCTCCACCTACACTaGACAGTCTATTGTAATCTG +
Preference number: 4 (lower is better)
Translates to: FENVVSYDHTGYTQAWARFLHLH*TVYCNL
Trigger: CAGATTACAATAGACTGTCCAGTGTAGGTGGAGAAA...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTGGCGTGTAAAGGTATaGGGCAAAGAATGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSWRVKV*GKEWPV
Trigger: AACAGGCCATTCTTTGCCCCATACCTTTACACGCCA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256707.8
ENST00000473731.5
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCATTGTTCTGATCTCTaGGCAAACTCGTTTTTACTG +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSHCSDL*ANSFLL
Trigger: CAGTAAAAACGAGTTTGCCCAGAGATCAGAACAATG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256707.8
ENST00000473731.5
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGGGAAGCATCGTTGGTaGAAACCCCTGATGATGAAT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKGKHRW*KPLMMN
Trigger: ATTCATCATCAGGGGTTTCCACCAACGATGCTTCCC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGGGAAGCATCGTTGGTaGAAACCCCTGATGATGAAT +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSGKHRW*KPLMMN
Trigger: ATTCATCATCAGGGGTTTCCACCAACGATGCTTCCC...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACTCAGCACTGTGTTCTaGAGACTTCGGCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVLSTVF*RLRHSL
Trigger: GAGAGAGTGCCGAAGTCTCCAGAACACAGTGCTGAG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGGGAGAACTTTCACTaGATCTCACTCCTGAATCCG +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKWENFH*ISLLNP
Trigger: CGGATTCAGGAGTGAGATCCAGTGAAAGTTCTCCCA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTTTGCCTTTTCAAGCTaGGAGTCATCCGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSFAFSS*ESSATS
Trigger: TGAAGTGGCGGATGACTCCCAGCTTGAAAAGGCAAA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCATCCGAGCTATAATTaGATCTTGCAGGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSHPSYN*ILQATQ
Trigger: CTGAGTGGCCTGCAAGATCCAATTATAGCTCGGATG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp AAAGCCAAACTCTCTTTCACAAGCATCCGAGAGGGTTGCAATCATTTCAGCCAGGGCAGCTATCATCAGTaGAGTCTGGCCACAAATATT +
Preference number: 4 (lower is better)
Translates to: KAKLSFTSIREGCNHFSQGSYHQ*SLATNI
Trigger: AATATTTGTGGCCAGACTCCACTGATGATAGCTGCC...CTGGCTGAAATGATTGCAACCCTCTCGGATGCTTGTGAAAGAGAGTTTGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCAAAGTTTAAGGCCGTaGTCTAATCCATGCATCATA +
Preference number: 4 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRQSLRP*SNPCII
Trigger: TATGATGCATGGATTAGACCACGGCCTTAAACTTTG...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 72 bp TCTTCATTAGAAAGGACTTCCTCCCATCATCGGGCTTaGGTTCACTATCCTTCCCCTTTTCTTGCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: SSLERTSSHHRA*VHYPSPFLALG
Trigger: ACCTAGAGCAAGAAAAGGGGAAGGATAGTGAACCAAAGCCCGATGATGGGAGGAAGTCCTTTCTAATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAACTTGGATTGGCACCATaGGAAAGAAGCAACTCTACT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKLGLAP*ERSNST
Trigger: AGTAGAGTTGCTTCTTTCTCATGGTGCCAATCCAAG...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCGTATGTCCCTCCTTTaGTGCAATCATCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSRMSLL*CNHQSC
Trigger: ACAGCTTTGATGATTGCATCAAAGGAGGGACATACG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCAACATGACCACCTCTaGCAGCGCCAATCAACACAG +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKQHDHL*QRQSTQ
Trigger: CTGTGTTGATTGGCGCTGTCAGAGGTGGTCATGTTG...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTATGAGCCATGAGAACTaGAAGAGAGGCTCAATCTGT +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSMSHEN*KRGSIC
Trigger: ACAGATTGAGCCTCTCTTTCAGTTCTCATGGCTCAT...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAAAACACTATGAGCCATaGGAACTGAAAGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKKHYEP*ELKERL
Trigger: GAGCCTCTCTTTCAGTTCTCATGGCTCATAGTGTTT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp CATCCCGAGCCCATTAATACTGATAGAGATACAACTCCACATAACCACGCCATAAAACACTATGAGCCATaGGAACTGAAAGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: HPEPINTDRDTTPHNHAIKHYEP*ELKERL
Trigger: GAGCCTCTCTTTCAGTTCTCATGGCTCATAGTGTTT...TATGGCGTGGTTATGTGGAGTTGTATCTCTATCAGTATTAATGGGCTCGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGATTTGGGTGGACCGTaGAGGCAAACAATAAACCAA +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSDLGGP*RQTINQ
Trigger: TTGGTTTATTGTTTGCCTTCACGGTCCACCCAAATC...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp CGAGCAGATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGTTGTCTGATTCTGAGTaGAGCTGTCAATGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: RADPAQSPYVPPLMQSSKLSDSE*SCQWFL
Trigger: CAAAAACCATTGACAGCTTCACTCAGAATCAGACAA...CTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATCTGCTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAAATGAACGGGCCTTTTaGAAACAGAACTCGGACAGT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKNERAF*KQNSDS
Trigger: ACTGTCCGAGTTCTGTTTTCAAAAGGCCCGTTCATT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp TCTTTGGGATTTCTTAAAAGCAGTTCTGCCAGTTTCCGGCTCCTTCCACGAATAAATGAACGGGCCTTTTaGAAACAGAACTCGGACAGT +
Preference number: 4 (lower is better)
Translates to: SLGFLKSSSASFRLLPRINERAF*KQNSDS
Trigger: ACTGTCCGAGTTCTGTTTTCAAAAGGCCCGTTCATT...TATTCGTGGAAGGAGCCGGAAACTGGCAGAACTGCTTTTAAGAAATCCCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTATGGCCATTTATATTTaGATCCCGAAGCACACTATT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSMAIYI*IPKHTI
Trigger: AATAGTGTGCTTCGGGATTCAAATATAAATGGCCAT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGTCTCCATTTGTTGCTaGAGTTACGAGAAATTTTCT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSVSICC*SYEKFS
Trigger: AGAAAATTTCTCGTAACTTCAGCAACAAATGGAGAC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTATCCCTGTAGTATCTaGGCATGGAACGTCTCCATT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKYPCSI*AWNVSI
Trigger: AATGGAGACGTTCCATGCTCAGATACTACAGGGATA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCTATCCCTGTAGTATCTaGGCATGGAACGTCTCCATT +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLYPCSI*AWNVSI
Trigger: AATGGAGACGTTCCATGCTCAGATACTACAGGGATA...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp CGAGCAGATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGCAGTTGAAACTAATCTaGTTGGCTCTCAGTAATCGT +
Preference number: 4 (lower is better)
Translates to: RADPAQSPYVPPLMQSSKQLKLI*LALSNR
Trigger: ACGATTACTGAGAGCCAATCAGATTAGTTTCAACTG...CTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATCTGCTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACAACTTAGATTACTGTaGCGAGGGGCACCTTCATCC +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVQLRLL*RGAPSS
Trigger: GGATGAAGGTGCCCCTCGTCACAGTAATCTAAGTTG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGCTCTAGGTTTGAATaGATAGAGCCCCCTGATGAA +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKCSRFE*IEPPDE
Trigger: TTCATCAGGGGGCTCTATTCATTCAAACCTAGAGCA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTGTCTGGAAGAGGCTTaGCCTTTCGGAAGATTTCTT +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSCLEEA*PFGRFL
Trigger: AAGAAATCTTCCGAAAGGTCAAGCCTCTTCCAGACA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCAGTGGAGTGTTATCTaGTTCTTCTGTGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKQWSVI*FFCARF
Trigger: GAATCTGGCACAGAAGAATCAGATAACACTCCACTG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AAGGTTGATCCAGCTAGCAAGCCTGTCCCAGTTGAAACTAATCTGATTGGCTCTTGTCTTTGTCATCTTTaGGCAGTGGAGTGTTATCTG +
Preference number: 4 (lower is better)
Translates to: KVDPASKPVPVETNLIGSCLCHL*AVECYL
Trigger: CAGATAACACTCCACTGCTCAAAGATGACAAAGACA...AGAGCCAATCAGATTAGTTTCAACTGGGACAGGCTTGCTAGCTGGATCAACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCGATGCAGATATAAGTaGTGTCCAATTATCCAAATC +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSRCRYK*CPIIQI
Trigger: GATTTGGATAATTGGACAGCACTTATATCTGCATCG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TTGCTTAGTCCACGACTATTAAGGAACACAGGCAAGTGGACTATGTTGCGCATGATGCCCTTCTTTCGATaGAGATATAAGTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LLSPRLLRNTGKWTMLRMMPFFR*RYKCCP
Trigger: TGGACAGCACTTATATCTGCATCGAAAGAAGGGCAT...CATGCGCAACATAGTCCACTTGCCTGTGTTCCTTAATAGTCGTGGACTAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTCTACGATGTGCACATaGCCTTCTTTCGATGCAGAT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKSTMCT*PSFDAD
Trigger: ATCTGCATCGAAAGAAGGGCATGTGCACATCGTAGA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCTCTACGATGTGCACATaGCCTTCTTTCGATGCAGAT +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLSTMCT*PSFDAD
Trigger: ATCTGCATCGAAAGAAGGGCATGTGCACATCGTAGA...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTCTACGATGTGCACATaGCCTTCTTTCGATGCAGAT +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSSTMCT*PSFDAD
Trigger: ATCTGCATCGAAAGAAGGGCATGTGCACATCGTAGA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp ATACTCTTTGGCTTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTGGAGATCTACGATGTGCACATaGCCTTCTTTCGATGCAGAT +
Preference number: 4 (lower is better)
Translates to: ILFGFNEGSDRLSTVFWRSTMCT*PSFDAD
Trigger: ATCTGCATCGAAAGAAGGGCATGTGCACATCGTAGA...TCTCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAAGCCAAAGAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCAGTTCCTCTACGATGTaGACATGCCCTTCTTTCGAT +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLSSSTM*TCPSFD
Trigger: ATCGAAAGAAGGGCATGTGCACATCGTAGAGGAACT...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGAGTTCCTCTACGATGTaGACATGCCCTTCTTTCGAT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKSSSTM*TCPSFD
Trigger: ATCGAAAGAAGGGCATGTGCACATCGTAGAGGAACT...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTTTCAGTGTCAGGATTaGACTGTAAGATATCTCTCA +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSFQCQD*TVRYLS
Trigger: TGAGAGATATCTTACAGTGCAATCCTGACACTGAAA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAATAAGGAGTCTCGCCTaGTTTGTTGGGCCTATAAAG +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKIRSLA*FVGPIK
Trigger: CTTTATAGGCCCAACAAAGCAGGCGAGACTCCTTAT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAACACAAATGGGTGGCTaGATGGTAGGCTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVTQMGG*MVGSLR
Trigger: TCTCAGTGAGCCTACCATGCAGCCACCCATTTGTGT...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTAAAGCTTTAGTAGTCTaGTCTGGCAACTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSKALVV*SGNSGG
Trigger: TCCACCTGAGTTGCCAGAGCAGACTACTAAAGCTTT...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAAAAGCTTTAGTAGTCTaGTCTGGCAACTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKKALVV*SGNSGG
Trigger: TCCACCTGAGTTGCCAGAGCAGACTACTAAAGCTTT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TCTTTGGGATTTCTTAAAAGCAGTTCTGCCAGTTTCCGGCTCCTTCCACGAATAAAAGCTTTAGTAGTCTaGTCTGGCAACTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SLGFLKSSSASFRLLPRIKALVV*SGNSGG
Trigger: TCCACCTGAGTTGCCAGAGCAGACTACTAAAGCTTT...TATTCGTGGAAGGAGCCGGAAACTGGCAGAACTGCTTTTAAGAAATCCCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp TCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCACACTAGCGAGTCCAGCACTTaGCACCATGTACGACAGTTC +
Preference number: 4 (lower is better)
Translates to: SVNANSLTALTFSHEKHTSESST*HHVRQF
Trigger: GAACTGTCGTACATGGTGGCAAGTGCTGGACTCGCT...AGTGTGCTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGCTGTCAATGGTTTTTaGCATCCTGGCCATCAATTC +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKAVNGF*HPGHQF
Trigger: GAATTGATGGCCAGGATGGCAAAAACCATTGACAGC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGGTCCGGTATGGCCACTaGTCAGTAAGGTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKVRYGH*SVRLIQ
Trigger: CTGGATCAACCTTACTGAGCAGTGGCCATACCGGAC...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACCTCCAATACTGATCTaGTCTCTGGCAGCACGAACA +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVPPILI*SLAART
Trigger: TGTTCGTGCTGCCAGAGAGCAGATCAGTATTGGAGG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTTTCGGAAGATTTCTTaGCTGGGAGAAGCTTACTGC +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSFRKIS*LGEAYC
Trigger: GCAGTAAGCTTCTCCCAGGCAAGAAATCTTCCGAAA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTTTCGGAAGATTTCTTaGCTGGGAGAAGCTTACTGC +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKFRKIS*LGEAYC
Trigger: GCAGTAAGCTTCTCCCAGGCAAGAAATCTTCCGAAA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCAGCTCTATGAGATTTaGCTTTTCAAGCTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSQLYEI*LFKLGV
Trigger: GACTCCCAGCTTGAAAAGGCAAATCTCATAGAGCTG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGCTATAATTGGATCTTaGAGGCCACTCAGGCTATGT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKAIIGS*RPLRLC
Trigger: ACATAGCCTGAGTGGCCTGCAAGATCCAATTATAGC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGCTGTATGCTATAATTGGATCTTaGAGGCCACTCAGGCTATGT +
Preference number: 4 (lower is better)
Translates to: DPAQSPYVPPLMQSSKLYAIIGS*RPLRLC
Trigger: ACATAGCCTGAGTGGCCTGCAAGATCCAATTATAGC...ATACAGCTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAAGTTTTCTTCAGGGCTaGTGGCTATCAAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKSFLQG*WLSSCI
Trigger: AATGCAGCTTGATAGCCAGCAGCCCTGAAGAAAACT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCATCATCAGTGGAGTCTaGCCACACTCATTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLIISGV*PHSFLS
Trigger: TGAGAGAAATGAGTGTGGCCAGACTCCACTGATGAT...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGCAGACCAGTGACACTTaGATTGGCACCATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISQTSDT*IGTMRK
Trigger: CTTTCTCATGGTGCCAATCCAAGTGTCACTGGTCTG...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGCTGCCCAAATGATTaGGTAAACACTGTACAGACC +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKCCPND*VNTVQT
Trigger: GGTCTGTACAGTGTTTACCCAATCATTTGGGCAGCA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAACCCAAACTAAAGGGGTaGTTCCATACTTATCAGAGC +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKPKLKG*FHTYQS
Trigger: GCTCTGATAAGTATGGAACCACCCCTTTAGTTTGGG...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCCCCAAACTAAAGGGGTaGTTCCATACTTATCAGAGC +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLPKLKG*FHTYQS
Trigger: GCTCTGATAAGTATGGAACCACCCCTTTAGTTTGGG...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCCCAAACTAAAGGGGTaGTTCCATACTTATCAGAGC +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSPKLKG*FHTYQS
Trigger: GCTCTGATAAGTATGGAACCACCCCTTTAGTTTGGG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp ATACTCTTTGGCTTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTGGAGACCCAAACTAAAGGGGTaGTTCCATACTTATCAGAGC +
Preference number: 4 (lower is better)
Translates to: ILFGFNEGSDRLSTVFWRPKLKG*FHTYQS
Trigger: GCTCTGATAAGTATGGAACCACCCCTTTAGTTTGGG...TCTCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAAGCCAAAGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCCACATCAGCTCCCATaGCCAATAAATGTTTCACAC +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKPHQLP*PINVSH
Trigger: GTGTGAAACATTTATTGGCCATGGGAGCTGATGTGG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTGCTATTCCAAGATTTaGGTGGACCGTGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKCYSKI*VDREGK
Trigger: TTTGCCTTCACGGTCCACCCAAATCTTGGAATAGCA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATTTAGTAGTCTGCTCTaGCAACTCAGGTGGATTCAC +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKFSSLL*QLRWIH
Trigger: GTGAATCCACCTGAGTTGCCAGAGCAGACTACTAAA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTTTAGTAGTCTGCTCTaGCAACTCAGGTGGATTCAC +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSFSSLL*QLRWIH
Trigger: GTGAATCCACCTGAGTTGCCAGAGCAGACTACTAAA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTCAATTTGTGCAGTTTaGAGGCTGCATTATGGAGGC +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSSICAV*RLHYGG
Trigger: GCCTCCATAATGCAGCCTCCAAACTGCACAAATTGA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTCAATTTGTGCAGTTTaGAGGCTGCATTATGGAGGC +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKSICAV*RLHYGG
Trigger: GCCTCCATAATGCAGCCTCCAAACTGCACAAATTGA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGTAATATGTGCTATGTaGAGAAGATCTGCCACTAAT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSVICAM*RRSATN
Trigger: ATTAGTGGCAGATCTTCTCCACATAGCACATATTAC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGAGCTTCAAATCTGTCTaGAAGAGGCTTGACCTTTCG +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKSFKSV*KRLDLS
Trigger: CGAAAGGTCAAGCCTCTTCCAGACAGATTTGAAGCT...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTAGCTTCAAATCTGTCTaGAAGAGGCTTGACCTTTCG +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSSFKSV*KRLDLS
Trigger: CGAAAGGTCAAGCCTCTTCCAGACAGATTTGAAGCT...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTGTGCAGAGAGTGATTaGGAGAACTTTCACTGGATC +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSCAESD*ENFHWI
Trigger: GATCCAGTGAAAGTTCTCCCAATCACTCTCTGCACA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTGTGCAGAGAGTGATTaGGAGAACTTTCACTGGATC +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKCAESD*ENFHWI
Trigger: GATCCAGTGAAAGTTCTCCCAATCACTCTCTGCACA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGATTGGCTCTGTTGGCTaGAGCACTATTGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKIGSVG*STIVVQ
Trigger: CTGAACAACAATAGTGCTCCAGCCAACAGAGCCAAT...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAATTCTGAATAGTGGTTaGGTTGGGACTGGAACTAGG +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKILNSG*VGTGTR
Trigger: CCTAGTTCCAGTCCCAACCCAACCACTATTCAGAAT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAGCTCCGGAGGATCTTTaGAGAGCCTTGTGTAACTTG +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVAPEDL*RALCNL
Trigger: CAAGTTACACAAGGCTCTCCAAAGATCCTCCGGAGC...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATGCCATACAGAACGCTaGATCTCGGTTTACTCAGCC +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVCHTER*ISVYSA
Trigger: GGCTGAGTAAACCGAGATCCAGCGTTCTGTATGGCA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCTGCTGCCCAAATGATTaGGTAAACACTGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLCCPND*VNTVLQ
Trigger: CTGCAGTACAGTGTTTACCCAATCATTTGGGCAGCA...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTGAGATCTAGGATTTaGTCTAAAAGATATCTCGAG +
Preference number: 4 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRLRSRI*SKRYLE
Trigger: CTCGAGATATCTTTTAGACCAAATCCTAGATCTCAG...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGGGAGCTTATCAAGACTaGCTGTGGATATCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISGAYQD*LWISVP
Trigger: AGGGACAGATATCCACAGCCAGTCTTGATAAGCTCC...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 72 bp TCTAGCAGCAGCTCCACCACTTCAATGTTTCTCATCTaGGTAGCCTTTATAAGTGGCGTTTCACCATCCTTT +
Preference number: 4 (lower is better)
Translates to: SSSSSTTSMFLI*VAFISGVSPSF
Trigger: AAAGGATGGTGAAACGCCACTTATAAAGGCTACCAAGATGAGAAACATTGAAGTGGTGGAGCTGCTGCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CAA 72 bp CTGGCAGCACGAACATCTGCAATAATTTCCCGTAGTTaGGGATCTAGGTTTACAGTGCATGGCAAAAAGACT +
Preference number: 4 (lower is better)
Translates to: LAARTSAIISRS*GSRFTVHGKKT
Trigger: AGTCTTTTTGCCATGCACTGTAAACCTAGATCCCAAACTACGGGAAATTATTGCAGATGTTCGTGCTGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CAA 72 bp TCACTGGATCTCACTCCTGAATCCGATGAATCCTTTTaGTCAAGGAGCGCATCCGATAAATACTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SLDLTPESDESF*SRSASDKYSLA
Trigger: AGCCAAAGAGTATTTATCGGATGCGCTCCTTGACAAAAAGGATTCATCGGATTCAGGAGTGAGATCCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp TTATCTAGCAGCAGCTCCACCACTTCAATGTTTCTCATCTTGGTAGCCTTTATATCCCTGCTGCCCAAATaGTTGGGTAAACACTGTACA +
Preference number: 4 (lower is better)
Translates to: LSSSSSTTSMFLILVAFISLLPK*LGKHCT
Trigger: TGTACAGTGTTTACCCAATCATTTGGGCAGCAGGGA...TATAAAGGCTACCAAGATGAGAAACATTGAAGTGGTGGAGCTGCTGCTAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGCGTATGTCCCTCCTTTaGTGCAATCATCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISRMSLL*CNHQSC
Trigger: ACAGCTTTGATGATTGCATCAAAGGAGGGACATACG...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACGAACAATTTCAACATaGCCACCTCTGACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTRTIST*PPLTAP
Trigger: TGGCGCTGTCAGAGGTGGTCATGTTGAAATTGTTCG...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGAGTATCTTCAGTCTTaGATACTCGAAAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSEYLQS*ILEKAW
Trigger: CCAGGCTTTTTCGAGTATTCAAGACTGAAGATACTC...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCAGATGCGATTGATATaGGGACAGCATTTACAGTCA +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKQMRLI*GQHLQS
Trigger: TGACTGTAAATGCTGTCCTCATATCAATCGCATCTG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCCAGATGCGATTGATATaGGGACAGCATTTACAGTCA +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLQMRLI*GQHLQS
Trigger: TGACTGTAAATGCTGTCCTCATATCAATCGCATCTG...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCACTACAGATGCGATTaGTATGAGGACAGCATTTAC +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSHYRCD*YEDSIY
Trigger: GTAAATGCTGTCCTCATATCAATCGCATCTGTAGTG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp CGAGCAGATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGATGGCCATTTATATTTaGATCCCGAAGCACACTATT +
Preference number: 4 (lower is better)
Translates to: RADPAQSPYVPPLMQSSKMAIYI*IPKHTI
Trigger: AATAGTGTGCTTCGGGATTCAAATATAAATGGCCAT...CTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATCTGCTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp CTTTGGGTCAACTCTAAATATAGCCAGAAGAGTAATTCCAGATATAATGCAGCCATCGTGGTACAATACTaGGGCAGCATACTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LWVNSKYSQKSNSRYNAAIVVQY*GSILWS
Trigger: GGACCAGAGTATGCTGCCTCAGTATTGTACCACGAT...GGCTGCATTATATCTGGAATTACTCTTCTGGCTATATTTAGAGTTGACCCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTCATCAATGTTACACTaGGCTAACACACGGCCATTT +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSSSMLH*ANTRPF
Trigger: AAATGGCCGTGTGTTAGCTCAGTGTAACATTGATGA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCATCTTCCAGCTCTATaGGATTTGCCTTTTCAAGCT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKHLPAL*DLPFQA
Trigger: AGCTTGAAAAGGCAAATCTCATAGAGCTGGAAGATG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp TTGCTTAGTCCACGACTATTAAGGAACACAGGCAAGTGGACTATGTTGCGCATGTTTAGATTCTCATTCTaGATAGTGGTTGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LLSPRLLRNTGKWTMLRMFRFSF*IVVGLG
Trigger: TCCCAACCCAACCACTATTCAGAATGAGAATCTAAA...CATGCGCAACATAGTCCACTTGCCTGTGTTCCTTAATAGTCGTGGACTAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACATTCCGTTGTCTCATaGAGGCCAGTACCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTHSVVS*RPVPLV
Trigger: AACCAGAGGTACTGGCCTTCATGAGACAACGGAATG...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGTTAATCTGGATCCTCTaGAGAGCTATCTATCTCAAG +
Preference number: 4 (lower is better)
Translates to: VKLHLSPILNLTCLWEAELIWIL*RAIYLK
Trigger: CTTGAGATAGATAGCTCTTCAGAGGATCCAGATTAA...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGGCATGCTATTGTGGTTaGAAGATTTCCAAAAGCACA +
Preference number: 4 (lower is better)
Translates to: VKLHLSPILNLTCLWEAEACYCG*KISKST
Trigger: TGTGCTTTTGGAAATCTTTCAACCACAATAGCATGC...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGCTGTTTGTTACAAGATaGGTCTCCATGCTTCATCGC +
Preference number: 4 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISLFVTR*VSMLHR
Trigger: GCGATGAAGCATGGAGACTCATCTTGTAACAAACAG...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTCACTATTTCCAGATTaGCTTGTTCGGCAGCTATCA +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKSLFPD*LVRQLS
Trigger: TGATAGCTGCCGAACAAGGCAATCTGGAAATAGTGA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTATGCCCTTCTTTCGATaGAGATATAAGTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSMPFFR*RYKCCP
Trigger: TGGACAGCACTTATATCTGCATCGAAAGAAGGGCAT...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAATGCCCTTCTTTCGATaGAGATATAAGTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKMPFFR*RYKCCP
Trigger: TGGACAGCACTTATATCTGCATCGAAAGAAGGGCAT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCCTCCCATATCACGGTaGTCCAAGTTAACCCCACAT +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKPPISR*SKLTPH
Trigger: ATGTGGGGTTAACTTGGAGCACCGTGATATGGGAGG...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCGTAACCTCCTTTCACTaGCACAATAAGTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLVTSFH*HNKCSH
Trigger: ATGACTGCACTTATTGTGGCAGTGAAAGGAGGTTAC...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGTAACCTCCTTTCACTaGCACAATAAGTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKVTSFH*HNKCSH
Trigger: ATGACTGCACTTATTGTGGCAGTGAAAGGAGGTTAC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGGCGTCGAGCAGATCCTaGACAATCTCCGTATGTCCC +
Preference number: 4 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKASSRS*TISVCP
Trigger: GGGACATACGGAGATTGTGCAGGATCTGCTCGACGC...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCCACGAATAGCAATATaGAAGGGAGTATCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKPRIAI*KGVSPF
Trigger: GAAAGGAGATACTCCCTTGCATATTGCTATTCGTGG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACAACACAAATGGGTGGCTaGATGGTAGGCTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTTQMGG*MVGSLR
Trigger: TCTCAGTGAGCCTACCATGCAGCCACCCATTTGTGT...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp ATCTGTTGTCCGGCGAAGGTTTTCATTTCGTCTTCTAGTTTCTTGAGTAAGAAAACACAAATGGGTGGCTaGATGGTAGGCTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: ICCPAKVFISSSSFLSKKTQMGG*MVGSLR
Trigger: TCTCAGTGAGCCTACCATGCAGCCACCCATTTGTGT...TTTCTTACTCAAGAAACTAGAAGACGAAATGAAAACCTTCGCCGGACAACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGGCTGTCAATGGTTTTTaGCATCCTGGCCATCAATTC +
Preference number: 4 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISAVNGF*HPGHQF
Trigger: GAATTGATGGCCAGGATGGCAAAAACCATTGACAGC...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGGTGCTTCTGAAAAGGTaGCAGTCTCCAAAATTCATA +
Preference number: 4 (lower is better)
Translates to: VKLHLSPILNLTCLWEAEVLLKR*QSPKFI
Trigger: TATGAATTTTGGAGACTGGCACCTTTTCAGAAGCAC...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAAAAGACTTGGGGTTCTaGGAGTTTGTGACTGCCAAC +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVKDLGF*EFVTAN
Trigger: GTTGGCAGTCACAAACTCGCAGAACCCCAAGTCTTT...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATCTCTATACTCGGCCTaGACCTTATCAGTAAGCTTT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKSLYSA*TLSVSF
Trigger: AAAGCTTACTGATAAGGTGCAGGCCGAGTATAGAGA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGACCCATGTAATATGTaGTATGTGGAGAAGATCTGC +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKDPCNM*YVEKIC
Trigger: GCAGATCTTCTCCACATAGCACATATTACATGGGTC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCTGGGAGAAGCTTACTaGCTGACTGATCTGATTTTT +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSLGEAY*LTDLIF
Trigger: AAAAATCAGATCAGTCAGGCAGTAAGCTTCTCCCAG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTATCTGATTCTTCTGTaGCAGATTCATCCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSYLILL*QIHPRH
Trigger: GTGACGAGGATGAATCTGGCACAGAAGAATCAGATA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATATCTGATTCTTCTGTaGCAGATTCATCCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKYLILL*QIHPRH
Trigger: GTGACGAGGATGAATCTGGCACAGAAGAATCAGATA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATGCTGGCTATCAAGCTaGATTCGGAAGGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVCWLSS*IRKGFS
Trigger: AGAAAAGCCCTTCCGAATGCAGCTTGATAGCCAGCA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAGATAAGCAATACCCCTaGCATACAGAACGCTGGATC +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVDKQYP*HTERWI
Trigger: GATCCAGCGTTCTGTATGGCAGGGGTATTGCTTATC...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256707.8
ENST00000473731.5
CDS-3UTR CCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGGGCAGCTATCATCAGTaGAGTCTGGCCACACTCATT +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKGSYHQ*SLATLI
Trigger: AATGAGTGTGGCCAGACTCCACTGATGATAGCTGCC...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACAGACCAGTGACACTTaGATTGGCACCATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVQTSDT*IGTMRK
Trigger: CTTTCTCATGGTGCCAATCCAAGTGTCACTGGTCTG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTATATCAGCATATTTTTaGAGAAGCGCTCGAACAATT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSISAYF*RSARTI
Trigger: AATTGTTCGAGCGCTTCTCCAAAAATATGCTGATAT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGGTAGCCTTTATAAGTaGCGTTTCACCATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSGSLYK*RFTILC
Trigger: ACAAAGGATGGTGAAACGCCACTTATAAAGGCTACC...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGGTAGCCTTTATAAGTaGCGTTTCACCATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKGSLYK*RFTILC
Trigger: ACAAAGGATGGTGAAACGCCACTTATAAAGGCTACC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCATTCCAAGATTTGGGTaGACCGTGAAGGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLIPRFG*TVKANN
Trigger: ATTGTTTGCCTTCACGGTCCACCCAAATCTTGGAAT...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGATTCCAAGATTTGGGTaGACCGTGAAGGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKIPRFG*TVKANN
Trigger: ATTGTTTGCCTTCACGGTCCACCCAAATCTTGGAAT...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp ATACTCTTTGGCTTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTGGAGAATTCCAAGATTTGGGTaGACCGTGAAGGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: ILFGFNEGSDRLSTVFWRIPRFG*TVKANN
Trigger: ATTGTTTGCCTTCACGGTCCACCCAAATCTTGGAAT...TCTCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAAGCCAAAGAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACATGGAGGCGTTTTCTTTaGGAATTCAGGAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTWRRFL*EFRSES
Trigger: GGACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCA...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp GAGTTAAAATACTCTTCTGATGGCTACAGTCAATATTATAAGGAGTCTCGCCTGTGGAGGCGTTTTCTTTaGGAATTCAGGAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: ELKYSSDGYSQYYKESRLWRRFL*EFRSES
Trigger: GGACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCA...CAGGCGAGACTCCTTATAATATTGACTGTAGCCATCAGAAGAGTATTTTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACAAGATCAAAGGACATCTaGCGAGTGATGGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTRSKDI*RVMVLC
Trigger: GCAGAGGACCATCACTCGCCAGATGTCCTTTGATCT...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTATCAATTTCAAGAAGTaGCTCAACATCCTTAGTTGT +
Preference number: 4 (lower is better)
Translates to: PFCHTADVSFTSASSSVSINFKK*LNILSC
Trigger: ACAACTAAGGATGTTGAGCCACTTCTTGAAATTGAT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATGGCGTGTAAAGGTATaGGGCAAAGAATGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVWRVKV*GKEWPV
Trigger: AACAGGCCATTCTTTGCCCCATACCTTTACACGCCA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256707.8
ENST00000473731.5
CDS-3UTR CCA 90 bp TGCATTTTTAGTCTACACCATCTAGCTTATGTGTCTTTTTGTAGTCTCAAGGGTGCCAGGGTAATACCTTaGCGTGTAAAGGTATGGGGC +
Preference number: 4 (lower is better)
Translates to: CIFSLHHLAYVSFCSLKGARVIP*RVKVWG
Trigger: GCCCCATACCTTTACACGCCAAGGTATTACCCTGGC...ACCCTTGAGACTACAAAAAGACACATAAGCTAGATGGTGTAGACTAAAAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATGGGAGAACTTTCACTaGATCTCACTCCTGAATCCG +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVWENFH*ISLLNP
Trigger: CGGATTCAGGAGTGAGATCCAGTGAAAGTTCTCCCA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACATCCGAGCTATAATTaGATCTTGCAGGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVHPSYN*ILQATQ
Trigger: CTGAGTGGCCTGCAAGATCCAATTATAGCTCGGATG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp CTTTGGGTCAACTCTAAATATAGCCAGAAGAGTAATTCCAGATATAATGCAGCCTTTCTTCAGGGCTGCTaGCTATCAAGCTGCATTCGG +
Preference number: 4 (lower is better)
Translates to: LWVNSKYSQKSNSRYNAAFLQGC*LSSCIR
Trigger: CCGAATGCAGCTTGATAGCCAGCAGCCCTGAAGAAA...GGCTGCATTATATCTGGAATTACTCTTCTGGCTATATTTAGAGTTGACCCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACAAATAATAATAGCTTaGCTTGCCGGACGCGATGGC +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVQIIIA*LAGRDG
Trigger: GCCATCGCGTCCGGCAAGCCAAGCTATTATTATTTG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCGCATGCCACCATGCCTaGCTTAGGTCCCTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCACHHA*LRSLRV
Trigger: AACTCTTAGGGACCTAAGCCAGGCATGGTGGCATGC...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCGCCTCCCCAAGTAGCTaGGATTACAAGTGCATGCCA +
Preference number: 4 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCASPSS*DYKCMP
Trigger: TGGCATGCACTTGTAATCCCAGCTACTTGGGGAGGC...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTATTTATTTCGTTTCTTaGATTGTGGAAAGAACTGGC +
Preference number: 4 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRIYFVS*IVERTG
Trigger: GCCAGTTCTTTCCACAATCCAAGAAACGAAATAAAT...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 72 bp CGAGCAGATCCTGCACAATCTCCGTATGTCCCTCCTTaGATGCAATCATCAAAGCTGTATTTCCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: RADPAQSPYVPP*MQSSKLYFHLY
Trigger: ATAAAGATGGAAATACAGCTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATCTGCTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGCAATTAACTTTATTTaGATACCTGGTCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKAINFI*IPGPQL
Trigger: GAGCTGAGGACCAGGTATTCAAATAAAGTTAATTGC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256707.8
ENST00000488729.5
CDS-3UTR TCA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGTTTTGCAGTAAAAGATaGACTATATCTGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: VKLHLSPILNLTCLWEAEFCSKR*TISAWP
Trigger: AGGCCATGCAGATATAGTTCATCTTTTACTGCAAAA...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGTTCACACATTCCAAATaGCCCTTTCGTGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKFTHSK*PFRAAQ
Trigger: TTGGGCTGCACGAAAGGGTCATTTGGAATGTGTGAA...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGGAATTAGCTCCTTCTTaGTCCACATCAGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKELAPS*STSAPM
Trigger: CATGGGAGCTGATGTGGATCAAGAAGGAGCTAATTC...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACGTATGTCCCTCCTTTaGTGCAATCATCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVRMSLL*CNHQSC
Trigger: ACAGCTTTGATGATTGCATCAAAGGAGGGACATACG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GTGGAGTCTGGCCACAAATATTTATACAAAACTGTATTAGCACCTAAAATGTCCCGAACAATTTCAACATaGCCACCTCTGACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: VESGHKYLYKTVLAPKMSRTIST*PPLTAP
Trigger: TGGCGCTGTCAGAGGTGGTCATGTTGAAATTGTTCG...GGACATTTTAGGTGCTAATACAGTTTTGTATAAATATTTGTGGCCAGACTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAATGAGCCATGAGAACTaGAAGAGAGGCTCAATCTGT +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVMSHEN*KRGSIC
Trigger: ACAGATTGAGCCTCTCTTTCAGTTCTCATGGCTCAT...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GATCTAGGATTTGGTCTAAAAGATATCTCGAGGCTCTTTCCCAATCTATTGCTCGATTTGGGTGGACCGTaGAGGCAAACAATAAACCAA +
Preference number: 4 (lower is better)
Translates to: DLGFGLKDISRLFPNLLLDLGGP*RQTINQ
Trigger: TTGGTTTATTGTTTGCCTTCACGGTCCACCCAAATC...GAGCAATAGATTGGGAAAGAGCCTCGAGATATCTTTTAGACCAAATCCTAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAAGCCAAGAAGCTCAGTaGCACTGCTATTCCAAGATT +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVSQEAQ*HCYSKI
Trigger: AATCTTGGAATAGCAGTGTCACTGAGCTTCTTGGCT...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCTTGTCTGATTCTGAGTaGAGCTGTCAATGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLLSDSE*SCQWFL
Trigger: CAAAAACCATTGACAGCTTCACTCAGAATCAGACAA...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATACAGTGTCCAGCATCTaGAGGACTTTGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNTVSSI*RTLSCS
Trigger: TGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGT...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp AAAGCCAAACTCTCTTTCACAAGCATCCGAGAGGGTTGCAATCATTTCAGCCAGGTCTCCATTTGTTGCTaGAGTTACGAGAAATTTTCT +
Preference number: 4 (lower is better)
Translates to: KAKLSFTSIREGCNHFSQVSICC*SYEKFS
Trigger: AGAAAATTTCTCGTAACTTCAGCAACAAATGGAGAC...CTGGCTGAAATGATTGCAACCCTCTCGGATGCTTGTGAAAGAGAGTTTGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATAAGTGTCCCGTCTATTaGGGGCTGTCTTGCTACCAA +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNKCPVY*GLSCYQ
Trigger: TTGGTAGCAAGACAGCCCTCAATAGACGGGACACTT...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCAGTTGAAACTAATCTaGTTGGCTCTCAGTAATCGT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKQLKLI*LALSNR
Trigger: ACGATTACTGAGAGCCAATCAGATTAGTTTCAACTG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCAGTTGAAACTAATCTaGTTGGCTCTCAGTAATCGT +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSQLKLI*LALSNR
Trigger: ACGATTACTGAGAGCCAATCAGATTAGTTTCAACTG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAACTTCCAAATATAATATaGGCCATGAAGTCCGGTATG +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKLPNII*AMKSGM
Trigger: CATACCGGACTTCATGGCTCATATTATATTTGGAAG...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCTTCCAAATATAATATaGGCCATGAAGTCCGGTATG +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSLPNII*AMKSGM
Trigger: CATACCGGACTTCATGGCTCATATTATATTTGGAAG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCTTCCAAATATAATATaGGCCATGAAGTCCGGTATG +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKLPNII*AMKSGM
Trigger: CATACCGGACTTCATGGCTCATATTATATTTGGAAG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAAAGAACTGGGGTCCTTaGAGACAAAAACACTTCAAA +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKKNWGP*RQKHFK
Trigger: TTTGAAGTGTTTTTGTCTTCAAGGACCCCAGTTCTT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATGCTCTAGGTTTGAATaGATAGAGCCCCCTGATGAA +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVCSRFE*IEPPDE
Trigger: TTCATCAGGGGGCTCTATTCATTCAAACCTAGAGCA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAAGCTTACTGCCTGACTaGTCTGATTTTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKSLLPD*SDFSSS
Trigger: AGAAGATGAAAAATCAGATCAGTCAGGCAGTAAGCT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGAGCTTACTGCCTGACTaGTCTGATTTTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKSLLPD*SDFSSS
Trigger: AGAAGATGAAAAATCAGATCAGTCAGGCAGTAAGCT...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACAGTGGAGTGTTATCTaGTTCTTCTGTGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVQWSVI*FFCARF
Trigger: GAATCTGGCACAGAAGAATCAGATAACACTCCACTG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTTTAGATTCTCATTCTaGATAGTGGTTGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKFRFSF*IVVGLG
Trigger: TCCCAACCCAACCACTATTCAGAATGAGAATCTAAA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp CATCCCGAGCCCATTAATACTGATAGAGATACAACTCCACATAACCACGCCATAGAAGAAATTCTGATATaGGCAAACTGGAAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: HPEPINTDRDTTPHNHAIEEILI*ANWKVV
Trigger: GACCACTTTCCAGTTTGCTCATATCAGAATTTCTTC...TATGGCGTGGTTATGTGGAGTTGTATCTCTATCAGTATTAATGGGCTCGGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGTCACTATTTCCAGATTaGCTTGTTCGGCAGCTATCA +
Preference number: 4 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISSLFPD*LVRQLS
Trigger: TGATAGCTGCCGAACAAGGCAATCTGGAAATAGTGA...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp TCCAGATTGCCTTGTTCGGCAGCTATCATCAGTGGAGTCTGGCCACAAATATTTCGATGCAGATATAAGTaGTGTCCAATTATCCAAATC +
Preference number: 4 (lower is better)
Translates to: SRLPCSAAIISGVWPQIFRCRYK*CPIIQI
Trigger: GATTTGGATAATTGGACAGCACTTATATCTGCATCG...AAATATTTGTGGCCAGACTCCACTGATGATAGCTGCCGAACAAGGCAATCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACAACGGCCTTTGTAACATaGCCACATAAGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTTAFVT*PHKSCP
Trigger: TGGACAGCTCTTATGTGGGCATGTTACAAAGGCCGT...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCATGGCCTCTCCCTGCTaGCCAAATGATTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCMASPC*PNDWVN
Trigger: GTTTACCCAATCATTTGGGCAGCAGGGAGAGGCCAT...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp TTGCTTAGTCCACGACTATTAAGGAACACAGGCAAGTGGACTATGTTGCGCATGTATCTGCCAGGGCACTaGTATATAAATCATATCCAA +
Preference number: 4 (lower is better)
Translates to: LLSPRLLRNTGKWTMLRMYLPGH*YINHIQ
Trigger: TTGGATATGATTTATATAGCAGTGCCCTGGCAGATA...CATGCGCAACATAGTCCACTTGCCTGTGTTCCTTAATAGTCGTGGACTAAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTATATCCAATATGTCTTaGCAATCTAGTGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSISNMS*QSSAED
Trigger: GTCCTCAGCACTAGATTGGCAAGACATATTGGATAT...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCATATCCAATATGTCTTaGCAATCTAGTGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLISNMS*QSSAED
Trigger: GTCCTCAGCACTAGATTGGCAAGACATATTGGATAT...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGATATCCAATATGTCTTaGCAATCTAGTGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKISNMS*QSSAED
Trigger: GTCCTCAGCACTAGATTGGCAAGACATATTGGATAT...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCACACTAGCATCCGAGAGGGTTaGAATCATTTCAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SVNANSLTALTFSHEKHTSIREG*NHFSQR
Trigger: TCTCTGGCTGAAATGATTGCAACCCTCTCGGATGCT...AGTGTGCTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACAGTGCAGTTTGGAGGCTaGATTATGGAGGCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTVQFGG*IMEAFS
Trigger: AGAAAACGCCTCCATAATGCAGCCTCCAAACTGCAC...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGACGGCCATTTATGTTTaGCTTTTTGATCGTGGTACA +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKTAIYV*LFDRGT
Trigger: TGTACCACGATCAAAAAGGCAAACATAAATGGCCGT...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTGCTTCTGAAAAGGTaGCAGTCTCCAAAATTCATA +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSVLLKR*QSPKFI
Trigger: TATGAATTTTGGAGACTGGCACCTTTTCAGAAGCAC...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp ATCTGTTGTCCGGCGAAGGTTTTCATTTCGTCTTCTAGTTTCTTGAGTAAGAAAAAAGACTTGGGGTTCTaGGAGTTTGTGACTGCCAAC +
Preference number: 4 (lower is better)
Translates to: ICCPAKVFISSSSFLSKKKDLGF*EFVTAN
Trigger: GTTGGCAGTCACAAACTCGCAGAACCCCAAGTCTTT...TTTCTTACTCAAGAAACTAGAAGACGAAATGAAAACCTTCGCCGGACAACAGAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACATCGGTCACAACTGTCTaGTCCACAGCATCTTTCGTA +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTSVTTV*STASFV
Trigger: TACGAAAGATGCTGTGGAGCAGACAGTTGTGACCGA...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp GAGTTAAAATACTCTTCTGATGGCTACAGTCAATATTATAAGGAGTCTCGCCTGCTTTATTTGAATACCTaGTCCTCAGCTCCGGCGGAA +
Preference number: 4 (lower is better)
Translates to: ELKYSSDGYSQYYKESRLLYLNT*SSAPAE
Trigger: TTCCGCCGGAGCTGAGGACCAGGTATTCAAATAAAG...CAGGCGAGACTCCTTATAATATTGACTGTAGCCATCAGAAGAGTATTTTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCGGCAGCTATCATCAGTaGAGTCTGGCCACACTCATT +
Preference number: 4 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCGSYHQ*SLATLI
Trigger: AATGAGTGTGGCCAGACTCCACTGATGATAGCTGCC...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCAGACCAGTGACACTTaGATTGGCACCATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKQTSDT*IGTMRK
Trigger: CTTTCTCATGGTGCCAATCCAAGTGTCACTGGTCTG...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACATCTCGCCTGCTTTGTTaGGCCTATAAAGTAATCGCC +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTSRLLC*AYKVIA
Trigger: GGCGATTACTTTATAGGCCCAACAAAGCAGGCGAGA...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATGCTATTCCAAGATTTaGGTGGACCGTGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVCYSKI*VDREGK
Trigger: TTTGCCTTCACGGTCCACCCAAATCTTGGAATAGCA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAACTCTGGCAACTCAGGTaGATTCACAAACATCAATTT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKLWQLR*IHKHQF
Trigger: AAATTGATGTTTGTGAATCCACCTGAGTTGCCAGAG...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCTCTGGCAACTCAGGTaGATTCACAAACATCAATTT +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSLWQLR*IHKHQF
Trigger: AAATTGATGTTTGTGAATCCACCTGAGTTGCCAGAG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GATCTAGGATTTGGTCTAAAAGATATCTCGAGGCTCTTTCCCAATCTATTGCTCTTTAGTAGTCTGCTCTaGCAACTCAGGTGGATTCAC +
Preference number: 4 (lower is better)
Translates to: DLGFGLKDISRLFPNLLLFSSLL*QLRWIH
Trigger: GTGAATCCACCTGAGTTGCCAGAGCAGACTACTAAA...GAGCAATAGATTGGGAAAGAGCCTCGAGATATCTTTTAGACCAAATCCTAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTTTCTCCACCTACACTaGACAGTCTATTGTAATCTG +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKFLHLH*TVYCNL
Trigger: CAGATTACAATAGACTGTCCAGTGTAGGTGGAGAAA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATGGTTTTTGCCATCCTaGCCATCAATTCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVWFLPS*PSIPLH
Trigger: GTGAAGTGGAATTGATGGCCAGGATGGCAAAAACCA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAAATCTTCTCATGGTCTaGGGACTGATGTCACTGAAC +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVNLLMV*GLMSLN
Trigger: GTTCAGTGACATCAGTCCCCAGACCATGAGAAGATT...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp CGAGCAGATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGATCAATTTCAAGAAGTaGCTCAACATCCTTAGTTGT +
Preference number: 4 (lower is better)
Translates to: RADPAQSPYVPPLMQSSKINFKK*LNILSC
Trigger: ACAACTAAGGATGTTGAGCCACTTCTTGAAATTGAT...CTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATCTGCTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp TCCAGATTGCCTTGTTCGGCAGCTATCATCAGTGGAGTCTGGCCACAAATATTTGTAATATGTGCTATGTaGAGAAGATCTGCCACTAAT +
Preference number: 4 (lower is better)
Translates to: SRLPCSAAIISGVWPQIFVICAM*RRSATN
Trigger: ATTAGTGGCAGATCTTCTCCACATAGCACATATTAC...AAATATTTGTGGCCAGACTCCACTGATGATAGCTGCCGAACAAGGCAATCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp GTGGAGTCTGGCCACAAATATTTATACAAAACTGTATTAGCACCTAAAATGTCCCCCATCATCGGGCTTTaGTTCACTATCCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: VESGHKYLYKTVLAPKMSPIIGL*FTILPL
Trigger: AAGGGGAAGGATAGTGAACCAAAGCCCGATGATGGG...GGACATTTTAGGTGCTAATACAGTTTTGTATAAATATTTGTGGCCAGACTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp ATCTGTTGTCCGGCGAAGGTTTTCATTTCGTCTTCTAGTTTCTTGAGTAAGAAATTTGCCTTTTCAAGCTaGGAGTCATCCGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: ICCPAKVFISSSSFLSKKFAFSS*ESSATS
Trigger: TGAAGTGGCGGATGACTCCCAGCTTGAAAAGGCAAA...TTTCTTACTCAAGAAACTAGAAGACGAAATGAAAACCTTCGCCGGACAACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAATTGGCTCTGTTGGCTaGAGCACTATTGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVIGSVG*STIVVQ
Trigger: CTGAACAACAATAGTGCTCCAGCCAACAGAGCCAAT...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAATTCTGAATAGTGGTTaGGTTGGGACTGGAACTAGG +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVILNSG*VGTGTR
Trigger: CCTAGTTCCAGTCCCAACCCAACCACTATTCAGAAT...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GTGGAGTCTGGCCACAAATATTTATACAAAACTGTATTAGCACCTAAAATGTCCTGCCATACAGAACGCTaGATCTCGGTTTACTCAGCC +
Preference number: 4 (lower is better)
Translates to: VESGHKYLYKTVLAPKMSCHTER*ISVYSA
Trigger: GGCTGAGTAAACCGAGATCCAGCGTTCTGTATGGCA...GGACATTTTAGGTGCTAATACAGTTTTGTATAAATATTTGTGGCCAGACTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCTATCAAGACTGGCTGTaGATATCTGTCCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCYQDWL*ISVPGR
Trigger: CCTCCCAGGGACAGATATCCACAGCCAGTCTTGATA...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 72 bp GTAAGCTTTGAAATTTCAATACTGGAATCCTGGGAATaGAGACTCGAAAGACTTGGGGTTCTGCGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: VSFEISILESWE*RLERLGVLRVC
Trigger: ACAAACTCGCAGAACCCCAAGTCTTTCGAGTCTCAATTCCCAGGATTCCAGTATTGAAATTTCAAAGCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
3UTR CAA 72 bp TGCCAACTGCTCCATGCTGGAAATTTATTTCGTTTCTaGGATTGTGGAAAGAACTGGCTTACTGAAAACCAC +
Preference number: 4 (lower is better)
Translates to: CQLLHAGNLFRF*DCGKNWLTENH
Trigger: GTGGTTTTCAGTAAGCCAGTTCTTTCCACAATCCAAGAAACGAAATAAATTTCCAGCATGGAGCAGTTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 72 bp GCAGTTGTCATGAAGATCAAATTAGGTCTTAGAACATaGTCAGATACACAGTGTGTTCAAACACGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: AVVMKIKLGLRT*SDTQCVQTRQA
Trigger: GGCTTGCCGTGTTTGAACACACTGTGTATCTGACAATGTTCTAAGACCTAATTTGATCTTCATGACAACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCTTGGATTGGCACCATaGGAAAGAAGCAACTCTACT +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKLGLAP*ERSNST
Trigger: AGTAGAGTTGCTTCTTTCTCATGGTGCCAATCCAAG...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTTTTGCAGTAAAAGATaGACTATATCTGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSFCSKR*TISAWP
Trigger: AGGCCATGCAGATATAGTTCATCTTTTACTGCAAAA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTTTTGCAGTAAAAGATaGACTATATCTGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKFCSKR*TISAWP
Trigger: AGGCCATGCAGATATAGTTCATCTTTTACTGCAAAA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCGAATTAGCTCCTTCTTaGTCCACATCAGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCELAPS*STSAPM
Trigger: CATGGGAGCTGATGTGGATCAAGAAGGAGCTAATTC...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGAAACACTATGAGCCATaGGAACTGAAAGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKKHYEP*ELKERL
Trigger: GAGCCTCTCTTTCAGTTCTCATGGCTCATAGTGTTT...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAGAGTATCTTCAGTCTTaGATACTCGAAAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVEYLQS*ILEKAW
Trigger: CCAGGCTTTTTCGAGTATTCAAGACTGAAGATACTC...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACACTACAGATGCGATTaGTATGAGGACAGCATTTAC +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVHYRCD*YEDSIY
Trigger: GTAAATGCTGTCCTCATATCAATCGCATCTGTAGTG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp TCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCACACTAATGAACGGGCCTTTTaGAAACAGAACTCGGACAGT +
Preference number: 4 (lower is better)
Translates to: SVNANSLTALTFSHEKHTNERAF*KQNSDS
Trigger: ACTGTCCGAGTTCTGTTTTCAAAAGGCCCGTTCATT...AGTGTGCTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCGTCTCCATTTGTTGCTaGAGTTACGAGAAATTTTCT +
Preference number: 4 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLVSICC*SYEKFS
Trigger: AGAAAATTTCTCGTAACTTCAGCAACAAATGGAGAC...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGAAGTGTCCCGTCTATTaGGGGCTGTCTTGCTACCAA +
Preference number: 4 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKKCPVY*GLSCYQ
Trigger: TTGGTAGCAAGACAGCCCTCAATAGACGGGACACTT...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTTATGTTTGCCTTTTTaGTCGTGGTACAATACTGAG +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSLCLPF*SWYNTE
Trigger: CTCAGTATTGTACCACGATCAAAAAGGCAAACATAA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATTATGTTTGCCTTTTTaGTCGTGGTACAATACTGAG +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKLCLPF*SWYNTE
Trigger: CTCAGTATTGTACCACGATCAAAAAGGCAAACATAA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATCATCAATGTTACACTaGGCTAACACACGGCCATTT +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVSSMLH*ANTRPF
Trigger: AAATGGCCGTGTGTTAGCTCAGTGTAACATTGATGA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GATCTAGGATTTGGTCTAAAAGATATCTCGAGGCTCTTTCCCAATCTATTGCTCTCATCAATGTTACACTaGGCTAACACACGGCCATTT +
Preference number: 4 (lower is better)
Translates to: DLGFGLKDISRLFPNLLLSSMLH*ANTRPF
Trigger: AAATGGCCGTGTGTTAGCTCAGTGTAACATTGATGA...GAGCAATAGATTGGGAAAGAGCCTCGAGATATCTTTTAGACCAAATCCTAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCCTAGTACTGTGCTTCTaGAAAGGTGCCAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCLVLCF*KGASLQ
Trigger: TTGGAGACTGGCACCTTTTCAGAAGCACAGTACTAG...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGCAACTTAGATTACTGTaGCGAGGGGCACCTTCATCC +
Preference number: 4 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKQLRLL*RGAPSS
Trigger: GGATGAAGGTGCCCCTCGTCACAGTAATCTAAGTTG...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp CTTTGGGTCAACTCTAAATATAGCCAGAAGAGTAATTCCAGATATAATGCAGCCTGTCTGGAAGAGGCTTaGCCTTTCGGAAGATTTCTT +
Preference number: 4 (lower is better)
Translates to: LWVNSKYSQKSNSRYNAACLEEA*PFGRFL
Trigger: AAGAAATCTTCCGAAAGGTCAAGCCTCTTCCAGACA...GGCTGCATTATATCTGGAATTACTCTTCTGGCTATATTTAGAGTTGACCCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp CTTTGGGTCAACTCTAAATATAGCCAGAAGAGTAATTCCAGATATAATGCAGCCCAGTGGAGTGTTATCTaGTTCTTCTGTGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: LWVNSKYSQKSNSRYNAAQWSVI*FFCARF
Trigger: GAATCTGGCACAGAAGAATCAGATAACACTCCACTG...GGCTGCATTATATCTGGAATTACTCTTCTGGCTATATTTAGAGTTGACCCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAATCTCATCGAAATTTTaGTTGGCTCTGTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVISSKF*LALLAG
Trigger: TCCAGCCAACAGAGCCAATCAAAATTTCGATGAGAT...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATTCCCTGCTGCCCAAATaGTTGGGTAAACACTGTACT +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNSLLPK*LGKHCT
Trigger: AGTACAGTGTTTACCCAATCATTTGGGCAGCAGGGA...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATTCAGAGGAGCAGAAGTaGCTGTACTGTTGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNSEEQK*LYCCLL
Trigger: GAGCAAACAACAGTACAGTCACTTCTGCTCCTCTGA...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp TGCATTTTTAGTCTACACCATCTAGCTTATGTGTCTTTTTGTAGTCTCAAGGGTACTAGGCCATTGTTCTaGTCTCTGGGCAAACTCGTT +
Preference number: 4 (lower is better)
Translates to: CIFSLHHLAYVSFCSLKGTRPLF*SLGKLV
Trigger: AACGAGTTTGCCCAGAGATCAGAACAATGGCCTAGT...ACCCTTGAGACTACAAAAAGACACATAAGCTAGATGGTGTAGACTAAAAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR GCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAGTAACCTCCTTTCACTaGCACAATAAGTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVVTSFH*HNKCSH
Trigger: ATGACTGCACTTATTGTGGCAGTGAAAGGAGGTTAC...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTTTCAGTGTCAGGATTaGACTGTAAGATATCTCTCA +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKFQCQD*TVRYLS
Trigger: TGAGAGATATCTTACAGTGCAATCCTGACACTGAAA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGATAAGGAGTCTCGCCTaGTTTGTTGGGCCTATAAAG +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKIRSLA*FVGPIK
Trigger: CTTTATAGGCCCAACAAAGCAGGCGAGACTCCTTAT...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGACACAAATGGGTGGCTaGATGGTAGGCTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKTQMGG*MVGSLR
Trigger: TCTCAGTGAGCCTACCATGCAGCCACCCATTTGTGT...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCAGCATCCGAGAGGGTTaGAATCATTTCAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCSIREG*NHFSQR
Trigger: TCTCTGGCTGAAATGATTGCAACCCTCTCGGATGCT...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGCATTTACAGTCAGATaGTTTGGGTCAACTCTAAAT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKAFTVR*FGSTLN
Trigger: ATTTAGAGTTGACCCAAAGCATCTGACTGTAAATGC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGCATTTACAGTCAGATaGTTTGGGTCAACTCTAAAT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKAFTVR*FGSTLN
Trigger: ATTTAGAGTTGACCCAAAGCATCTGACTGTAAATGC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTAATATGTGGATCACTTaGAAAAATGGCAATGAACGG +
Preference number: 4 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSNMWIT*KNGNER
Trigger: CCGTTCATTGCCATTTTTGCAAGTGATCCACATATT...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGAATATGTGGATCACTTaGAAAAATGGCAATGAACGG +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKNMWIT*KNGNER
Trigger: CCGTTCATTGCCATTTTTGCAAGTGATCCACATATT...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATGCAAGTGGACTATGTTaGGCATGTAGTCATGGCCAT +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNASGLC*ACSHGH
Trigger: ATGGCCATGACTACATGCGCAACATAGTCCACTTGC...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCGCAAGTGGACTATGTTaGGCATGTAGTCATGGCCAT +
Preference number: 4 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCASGLC*ACSHGH
Trigger: ATGGCCATGACTACATGCGCAACATAGTCCACTTGC...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATCTCTATACTCGGCCTaGACCTTATCAGTAAGCTTT +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVSLYSA*TLSVSF
Trigger: AAAGCTTACTGATAAGGTGCAGGCCGAGTATAGAGA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAGACCCATGTAATATGTaGTATGTGGAGAAGATCTGC +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVDPCNM*YVEKIC
Trigger: GCAGATCTTCTCCACATAGCACATATTACATGGGTC...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp CTTTGGGTCAACTCTAAATATAGCCAGAAGAGTAATTCCAGATATAATGCAGCCTTTCGGAAGATTTCTTaGCTGGGAGAAGCTTACTGC +
Preference number: 4 (lower is better)
Translates to: LWVNSKYSQKSNSRYNAAFRKIS*LGEAYC
Trigger: GCAGTAAGCTTCTCCCAGGCAAGAAATCTTCCGAAA...GGCTGCATTATATCTGGAATTACTCTTCTGGCTATATTTAGAGTTGACCCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGAGGTCCCTAAGAGTTTaGAACAAAGCATGCTATTGT +
Preference number: 4 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISRSLRV*NKACYC
Trigger: ACAATAGCATGCTTTGTTGCAAACTCTTAGGGACCT...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATCTTTATTTGAATACCTaGTCCTCAGCTCCGGCGGAA +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNLYLNT*SSAPAE
Trigger: TTCCGCCGGAGCTGAGGACCAGGTATTCAAATAAAG...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp TCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCACACTCCACATCAGCTCCCATaGCCAATAAATGTTTCACAC +
Preference number: 4 (lower is better)
Translates to: SVNANSLTALTFSHEKHTPHQLP*PINVSH
Trigger: GTGTGAAACATTTATTGGCCATGGGAGCTGATGTGG...AGTGTGCTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGTAATCGCCCATCTTTaGGATTTCTTAAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKVIAHL*DFLKAV
Trigger: AACTGCTTTTAAGAAATCCCAAAGATGGGCGATTAC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGTAATCGCCCATCTTTaGGATTTCTTAAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKVIAHL*DFLKAV
Trigger: AACTGCTTTTAAGAAATCCCAAAGATGGGCGATTAC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGCTGTATGTAATCGCCCATCTTTaGGATTTCTTAAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: DPAQSPYVPPLMQSSKLYVIAHL*DFLKAV
Trigger: AACTGCTTTTAAGAAATCCCAAAGATGGGCGATTAC...ATACAGCTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACATGCTATTCCAAGATTTaGGTGGACCGTGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTCYSKI*VDREGK
Trigger: TTTGCCTTCACGGTCCACCCAAATCTTGGAATAGCA...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACATTTAGTAGTCTGCTCTaGCAACTCAGGTGGATTCAC +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTFSSLL*QLRWIH
Trigger: GTGAATCCACCTGAGTTGCCAGAGCAGACTACTAAA...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGTCAATTTGTGCAGTTTaGAGGCTGCATTATGGAGGC +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKSICAV*RLHYGG
Trigger: GCCTCCATAATGCAGCCTCCAAACTGCACAAATTGA...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp TCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCACACTTGGTTTTTGCCATCCTaGCCATCAATTCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: SVNANSLTALTFSHEKHTWFLPS*PSIPLH
Trigger: GTGAAGTGGAATTGATGGCCAGGATGGCAAAAACCA...AGTGTGCTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGAATCTTCTCATGGTCTaGGGACTGATGTCACTGAAC +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKNLLMV*GLMSLN
Trigger: GTTCAGTGACATCAGTCCCCAGACCATGAGAAGATT...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGTAATATGTGCTATGTaGAGAAGATCTGCCACTAAT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKVICAM*RRSATN
Trigger: ATTAGTGGCAGATCTTCTCCACATAGCACATATTAC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp ATCTGTTGTCCGGCGAAGGTTTTCATTTCGTCTTCTAGTTTCTTGAGTAAGAAATGTGCAGAGAGTGATTaGGAGAACTTTCACTGGATC +
Preference number: 4 (lower is better)
Translates to: ICCPAKVFISSSSFLSKKCAESD*ENFHWI
Trigger: GATCCAGTGAAAGTTCTCCCAATCACTCTCTGCACA...TTTCTTACTCAAGAAACTAGAAGACGAAATGAAAACCTTCGCCGGACAACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATTTGATTGGCTCTGTTaGCTGGAGCACTATTGTTGT +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVFDWLC*LEHYCC
Trigger: ACAACAATAGTGCTCCAGCCAACAGAGCCAATCAAA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGAGCTCTCCATCAACATaGCAACTAACACTGACTTGG +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKSSPST*QLTLTW
Trigger: CCAAGTCAGTGTTAGTTGCCATGTTGATGGAGAGCT...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATCGTATGTCCCTCCTTTaGTGCAATCATCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNRMSLL*CNHQSC
Trigger: ACAGCTTTGATGATTGCATCAAAGGAGGGACATACG...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATATGAGCCATGAGAACTaGAAGAGAGGCTCAATCTGT +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNMSHEN*KRGSIC
Trigger: ACAGATTGAGCCTCTCTTTCAGTTCTCATGGCTCAT...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATGATTTGGGTGGACCGTaGAGGCAAACAATAAACCAA +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNDLGGP*RQTINQ
Trigger: TTGGTTTATTGTTTGCCTTCACGGTCCACCCAAATC...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATAGCCAAGAAGCTCAGTaGCACTGCTATTCCAAGATT +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNSQEAQ*HCYSKI
Trigger: AATCTTGGAATAGCAGTGTCACTGAGCTTCTTGGCT...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp GTGGAGTCTGGCCACAAATATTTATACAAAACTGTATTAGCACCTAAAATGTCCAGCCAAGAAGCTCAGTaGCACTGCTATTCCAAGATT +
Preference number: 4 (lower is better)
Translates to: VESGHKYLYKTVLAPKMSSQEAQ*HCYSKI
Trigger: AATCTTGGAATAGCAGTGTCACTGAGCTTCTTGGCT...GGACATTTTAGGTGCTAATACAGTTTTGTATAAATATTTGTGGCCAGACTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACAGAGTATCTTCAGTCTTaGATACTCGAAAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTEYLQS*ILEKAW
Trigger: CCAGGCTTTTTCGAGTATTCAAGACTGAAGATACTC...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACACTACAGATGCGATTaGTATGAGGACAGCATTTAC +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTHYRCD*YEDSIY
Trigger: GTAAATGCTGTCCTCATATCAATCGCATCTGTAGTG...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATTGTCTGATTCTGAGTaGAGCTGTCAATGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVLSDSE*SCQWFL
Trigger: CAAAAACCATTGACAGCTTCACTCAGAATCAGACAA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGATGGCCATTTATATTTaGATCCCGAAGCACACTATT +
Preference number: 4 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISMAIYI*IPKHTI
Trigger: AATAGTGTGCTTCGGGATTCAAATATAAATGGCCAT...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GTGGAGTCTGGCCACAAATATTTATACAAAACTGTATTAGCACCTAAAATGTCCTATCCCTGTAGTATCTaGGCATGGAACGTCTCCATT +
Preference number: 4 (lower is better)
Translates to: VESGHKYLYKTVLAPKMSYPCSI*AWNVSI
Trigger: AATGGAGACGTTCCATGCTCAGATACTACAGGGATA...GGACATTTTAGGTGCTAATACAGTTTTGTATAAATATTTGTGGCCAGACTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCTATCCCTGTAGTATCTaGGCATGGAACGTCTCCATT +
Preference number: 4 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCYPCSI*AWNVSI
Trigger: AATGGAGACGTTCCATGCTCAGATACTACAGGGATA...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACAATGCCCTTCTTTCGATaGAGATATAAGTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTMPFFR*RYKCCP
Trigger: TGGACAGCACTTATATCTGCATCGAAAGAAGGGCAT...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp TCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCACACTCCACGAATAGCAATATaGAAGGGAGTATCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SVNANSLTALTFSHEKHTPRIAI*KGVSPF
Trigger: GAAAGGAGATACTCCCTTGCATATTGCTATTCGTGG...AGTGTGCTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATAAAGCTTTAGTAGTCTaGTCTGGCAACTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNKALVV*SGNSGG
Trigger: TCCACCTGAGTTGCCAGAGCAGACTACTAAAGCTTT...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATGCTGTCAATGGTTTTTaGCATCCTGGCCATCAATTC +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNAVNGF*HPGHQF
Trigger: GAATTGATGGCCAGGATGGCAAAAACCATTGACAGC...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGATCTAGGTTTACAGTaGATGGCAAAAAGACTTTTA +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKDLGLQ*MAKRLL
Trigger: TAAAAGTCTTTTTGCCATGCACTGTAAACCTAGATC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TCTTTGGGATTTCTTAAAAGCAGTTCTGCCAGTTTCCGGCTCCTTCCACGAATAGATCTAGGTTTACAGTaGATGGCAAAAAGACTTTTA +
Preference number: 4 (lower is better)
Translates to: SLGFLKSSSASFRLLPRIDLGLQ*MAKRLL
Trigger: TAAAAGTCTTTTTGCCATGCACTGTAAACCTAGATC...TATTCGTGGAAGGAGCCGGAAACTGGCAGAACTGCTTTTAAGAAATCCCAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp ATTTTTAGTCTACACCATCTAGCTTATGTGTCTTTTTGTAGTCTCAAGGGTGATCTACTCTACACTAGCTaGTCATCACACCACAAACGC +
Preference number: 4 (lower is better)
Translates to: IFSLHHLAYVSFCSLKGDLLYTS*SSHHKR
Trigger: GCGTTTGTGGTGTGATGAGCAGCTAGTGTAGAGTAG...ATCACCCTTGAGACTACAAAAAGACACATAAGCTAGATGGTGTAGACTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR GCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCATTCTTAACCTTACTTaGCTTTGGGAGGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCILNLT*LWEAEA
Trigger: TGCCTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAAT...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAATATCAGCATATTTTTaGAGAAGCGCTCGAACAATT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKISAYF*RSARTI
Trigger: AATTGTTCGAGCGCTTCTCCAAAAATATGCTGATAT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGATATCAGCATATTTTTaGAGAAGCGCTCGAACAATT +
Preference number: 4 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKISAYF*RSARTI
Trigger: AATTGTTCGAGCGCTTCTCCAAAAATATGCTGATAT...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp CATCCCGAGCCCATTAATACTGATAGAGATACAACTCCACATAACCACGCCATAATATCAGCATATTTTTaGAGAAGCGCTCGAACAATT +
Preference number: 4 (lower is better)
Translates to: HPEPINTDRDTTPHNHAIISAYF*RSARTI
Trigger: AATTGTTCGAGCGCTTCTCCAAAAATATGCTGATAT...TATGGCGTGGTTATGTGGAGTTGTATCTCTATCAGTATTAATGGGCTCGGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATTTCTCCACCTACACTaGACAGTCTATTGTAATCTG +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVFLHLH*TVYCNL
Trigger: CAGATTACAATAGACTGTCCAGTGTAGGTGGAGAAA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATTTGGAGGCTGCATTATaGAGGCGTTTTCTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNLEAAL*RRFLWE
Trigger: TTCCCAAAGAAAACGCCTCCATAATGCAGCCTCCAA...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCTTGGAGGCTGCATTATaGAGGCGTTTTCTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCLEAAL*RRFLWE
Trigger: TTCCCAAAGAAAACGCCTCCATAATGCAGCCTCCAA...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAATCAATTTCAAGAAGTaGCTCAACATCCTTAGTTGT +
Preference number: 4 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKINFKK*LNILSC
Trigger: ACAACTAAGGATGTTGAGCCACTTCTTGAAATTGAT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACATTGTTCTGATCTCTaGGCAAACTCGTTTTTACTG +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVHCSDL*ANSFLL
Trigger: CAGTAAAAACGAGTTTGCCCAGAGATCAGAACAATG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256707.8
ENST00000473731.5
CDS-3UTR CCA 90 bp GTGGAGTCTGGCCACAAATATTTATACAAAACTGTATTAGCACCTAAAATGTCCATTGGCTCTGTTGGCTaGAGCACTATTGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: VESGHKYLYKTVLAPKMSIGSVG*STIVVQ
Trigger: CTGAACAACAATAGTGCTCCAGCCAACAGAGCCAAT...GGACATTTTAGGTGCTAATACAGTTTTGTATAAATATTTGTGGCCAGACTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp CTTTGGGTCAACTCTAAATATAGCCAGAAGAGTAATTCCAGATATAATGCAGCCTTTGATTGGCTCTGTTaGCTGGAGCACTATTGTTGT +
Preference number: 4 (lower is better)
Translates to: LWVNSKYSQKSNSRYNAAFDWLC*LEHYCC
Trigger: ACAACAATAGTGCTCCAGCCAACAGAGCCAATCAAA...GGCTGCATTATATCTGGAATTACTCTTCTGGCTATATTTAGAGTTGACCCAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp GATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGCTGTATATCATCAGTGGAGTCTaGCCACAAATATTTATACAA +
Preference number: 4 (lower is better)
Translates to: DPAQSPYVPPLMQSSKLYIISGV*PQIFIQ
Trigger: TTGTATAAATATTTGTGGCCAGACTCCACTGATGAT...ATACAGCTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGTCCATGCATCATAATTaGATGAGTGATATCCATCGA +
Preference number: 4 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISSMHHN*MSDIHR
Trigger: TCGATGGATATCACTCATCCAATTATGATGCATGGA...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GTGGAGTCTGGCCACAAATATTTATACAAAACTGTATTAGCACCTAAAATGTCCGAGTATCTTCAGTCTTaGATACTCGAAAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VESGHKYLYKTVLAPKMSEYLQS*ILEKAW
Trigger: CCAGGCTTTTTCGAGTATTCAAGACTGAAGATACTC...GGACATTTTAGGTGCTAATACAGTTTTGTATAAATATTTGTGGCCAGACTCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAATGGCCATTTATATTTaGATCCCGAAGCACACTATT +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVMAIYI*IPKHTI
Trigger: AATAGTGTGCTTCGGGATTCAAATATAAATGGCCAT...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAGTCTCCATTTGTTGCTaGAGTTACGAGAAATTTTCT +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVVSICC*SYEKFS
Trigger: AGAAAATTTCTCGTAACTTCAGCAACAAATGGAGAC...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR TCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCTTCCAAATATAATATaGGCCATGAAGTCCGGTATG +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKLPNII*AMKSGM
Trigger: CATACCGGACTTCATGGCTCATATTATATTTGGAAG...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp GATCTAGGATTTGGTCTAAAAGATATCTCGAGGCTCTTTCCCAATCTATTGCTCTTATGTTTGCCTTTTTaGTCGTGGTACAATACTGAG +
Preference number: 4 (lower is better)
Translates to: DLGFGLKDISRLFPNLLLLCLPF*SWYNTE
Trigger: CTCAGTATTGTACCACGATCAAAAAGGCAAACATAA...GAGCAATAGATTGGGAAAGAGCCTCGAGATATCTTTTAGACCAAATCCTAGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCATGAGAAGCACACTTaGTTGTTTCCAAAGGGATAT +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKHEKHT*LFPKGY
Trigger: ATATCCCTTTGGAAACAATCAAGTGTGCTTCTCATG...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATTCACTATTTCCAGATTaGCTTGTTCGGCAGCTATCA +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNSLFPD*LVRQLS
Trigger: TGATAGCTGCCGAACAAGGCAATCTGGAAATAGTGA...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACGATGCAGATATAAGTaGTGTCCAATTATCCAAATC +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVRCRYK*CPIIQI
Trigger: GATTTGGATAATTGGACAGCACTTATATCTGCATCG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp TTATCTAGCAGCAGCTCCACCACTTCAATGTTTCTCATCTTGGTAGCCTTTATATTTCAGTGTCAGGATTaGACTGTAAGATATCTCTCA +
Preference number: 4 (lower is better)
Translates to: LSSSSSTTSMFLILVAFIFQCQD*TVRYLS
Trigger: TGAGAGATATCTTACAGTGCAATCCTGACACTGAAA...TATAAAGGCTACCAAGATGAGAAACATTGAAGTGGTGGAGCTGCTGCTAGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATATCTGCCAGGGCACTaGTATATAAATCATATCCAA +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVYLPGH*YINHIQ
Trigger: TTGGATATGATTTATATAGCAGTGCCCTGGCAGATA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGGATCTAGGTTTACAGTaGATGGCAAAAAGACTTTTA +
Preference number: 4 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISDLGLQ*MAKRLL
Trigger: TAAAAGTCTTTTTGCCATGCACTGTAAACCTAGATC...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATGGTAGCCTTTATAAGTaGCGTTTCACCATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNGSLYK*RFTILC
Trigger: ACAAAGGATGGTGAAACGCCACTTATAAAGGCTACC...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCATTCCAAGATTTGGGTaGACCGTGAAGGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCIPRFG*TVKANN
Trigger: ATTGTTTGCCTTCACGGTCCACCCAAATCTTGGAAT...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCTCTGGCAACTCAGGTaGATTCACAAACATCAATTT +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKLWQLR*IHKHQF
Trigger: AAATTGATGTTTGTGAATCCACCTGAGTTGCCAGAG...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp GAGTTAAAATACTCTTCTGATGGCTACAGTCAATATTATAAGGAGTCTCGCCTGCTCTGGCAACTCAGGTaGATTCACAAACATCAATTT +
Preference number: 4 (lower is better)
Translates to: ELKYSSDGYSQYYKESRLLWQLR*IHKHQF
Trigger: AAATTGATGTTTGTGAATCCACCTGAGTTGCCAGAG...CAGGCGAGACTCCTTATAATATTGACTGTAGCCATCAGAAGAGTATTTTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGTTTCTCCACCTACACTaGACAGTCTATTGTAATCTG +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKFLHLH*TVYCNL
Trigger: CAGATTACAATAGACTGTCCAGTGTAGGTGGAGAAA...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp GAGTTAAAATACTCTTCTGATGGCTACAGTCAATATTATAAGGAGTCTCGCCTGTTTCTCCACCTACACTaGACAGTCTATTGTAATCTG +
Preference number: 4 (lower is better)
Translates to: ELKYSSDGYSQYYKESRLFLHLH*TVYCNL
Trigger: CAGATTACAATAGACTGTCCAGTGTAGGTGGAGAAA...CAGGCGAGACTCCTTATAATATTGACTGTAGCCATCAGAAGAGTATTTTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CCA 90 bp GTAATACCTTGGCGTGTAAAGGTATGGGGCAAAGAATGGCTTAAGAGAACAGTTATCAATTTCAAGAAGTaGCTCAACATCCTTAGTTGT +
Preference number: 4 (lower is better)
Translates to: VIPWRVKVWGKEWLKRTVINFKK*LNILSC
Trigger: ACAACTAAGGATGTTGAGCCACTTCTTGAAATTGAT...AACTGTTCTCTTAAGCCATTCTTTGCCCCATACCTTTACACGCCAAGGTATTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR CCA 90 bp GATCTAGGATTTGGTCTAAAAGATATCTCGAGGCTCTTTCCCAATCTATTGCTCCAATGTCAGGTTATATaGAGCTTATTCACATGCTTC +
Preference number: 4 (lower is better)
Translates to: DLGFGLKDISRLFPNLLLQCQVI*SLFTCF
Trigger: GAAGCATGTGAATAAGCTCCATATAACCTGACATTG...GAGCAATAGATTGGGAAAGAGCCTCGAGATATCTTTTAGACCAAATCCTAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 72 bp GTTTCACCATCCTTTGTGCATATTTCAGTGTCAGGATaGCACTGTAAGATATCTCTCACCATTGTTGCATTT +
Preference number: 4 (lower is better)
Translates to: VSPSFVHISVSG*HCKISLTIVAF
Trigger: AAATGCAACAATGGTGAGAGATATCTTACAGTGCAATCCTGACACTGAAATATGCACAAAGGATGGTGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATGCAATTAACTTTATTTaGATACCTGGTCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNAINFI*IPGPQL
Trigger: GAGCTGAGGACCAGGTATTCAAATAAAGTTAATTGC...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp TCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCACACTTTTTGCAGTAAAAGATaGACTATATCTGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: SVNANSLTALTFSHEKHTFCSKR*TISAWP
Trigger: AGGCCATGCAGATATAGTTCATCTTTTACTGCAAAA...AGTGTGCTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACAATGGCCATTTATATTTaGATCCCGAAGCACACTATT +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTMAIYI*IPKHTI
Trigger: AATAGTGTGCTTCGGGATTCAAATATAAATGGCCAT...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATCAGTTGAAACTAATCTaGTTGGCTCTCAGTAATCGT +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNQLKLI*LALSNR
Trigger: ACGATTACTGAGAGCCAATCAGATTAGTTTCAACTG...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCAGTTGAAACTAATCTaGTTGGCTCTCAGTAATCGT +
Preference number: 4 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCQLKLI*LALSNR
Trigger: ACGATTACTGAGAGCCAATCAGATTAGTTTCAACTG...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp TGCATTTTTAGTCTACACCATCTAGCTTATGTGTCTTTTTGTAGTCTCAAGGGTAAGAACTGGGGTCCTTaGAGACAAAAACACTTCAAA +
Preference number: 4 (lower is better)
Translates to: CIFSLHHLAYVSFCSLKGKNWGP*RQKHFK
Trigger: TTTGAAGTGTTTTTGTCTTCAAGGACCCCAGTTCTT...ACCCTTGAGACTACAAAAAGACACATAAGCTAGATGGTGTAGACTAAAAATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR TCA 90 bp ATCTGTTGTCCGGCGAAGGTTTTCATTTCGTCTTCTAGTTTCTTGAGTAAGAAATTATGTTTGCCTTTTTaGTCGTGGTACAATACTGAG +
Preference number: 4 (lower is better)
Translates to: ICCPAKVFISSSSFLSKKLCLPF*SWYNTE
Trigger: CTCAGTATTGTACCACGATCAAAAAGGCAAACATAA...TTTCTTACTCAAGAAACTAGAAGACGAAATGAAAACCTTCGCCGGACAACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR TCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCCTTGCACTTTAAAATaGTGGAGCTTATCAAGACTG +
Preference number: 4 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCPCTLK*WSLSRL
Trigger: CAGTCTTGATAAGCTCCATCATTTTAAAGTGCAAGG...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCGAATGGTTGAAGAAGTaGGCTACAGATAGGGTAAAT +
Preference number: 4 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCEWLKK*ATDRVN
Trigger: ATTTACCCTATCTGTAGCTCACTTCTTCAACCATTC...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACGATGCAGATATAAGTaGTGTCCAATTATCCAAATC +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTRCRYK*CPIIQI
Trigger: GATTTGGATAATTGGACAGCACTTATATCTGCATCG...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGATGCCCTTCTTTCGATaGAGATATAAGTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKMPFFR*RYKCCP
Trigger: TGGACAGCACTTATATCTGCATCGAAAGAAGGGCAT...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGGTAACCTCCTTTCACTaGCACAATAAGTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKVTSFH*HNKCSH
Trigger: ATGACTGCACTTATTGTGGCAGTGAAAGGAGGTTAC...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACATTTCAGTGTCAGGATTaGACTGTAAGATATCTCTCA +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTFQCQD*TVRYLS
Trigger: TGAGAGATATCTTACAGTGCAATCCTGACACTGAAA...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACATATCTGCCAGGGCACTaGTATATAAATCATATCCAA +
Preference number: 4 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTYLPGH*YINHIQ
Trigger: TTGGATATGATTTATATAGCAGTGCCCTGGCAGATA...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGGCATTTACAGTCAGATaGTTTGGGTCAACTCTAAAT +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKAFTVR*FGSTLN
Trigger: ATTTAGAGTTGACCCAAAGCATCTGACTGTAAATGC...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGAATATGTGGATCACTTaGAAAAATGGCAATGAACGG +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKNMWIT*KNGNER
Trigger: CCGTTCATTGCCATTTTTGCAAGTGATCCACATATT...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp ATCTGTTGTCCGGCGAAGGTTTTCATTTCGTCTTCTAGTTTCTTGAGTAAGAAAAATATGTGGATCACTTaGAAAAATGGCAATGAACGG +
Preference number: 4 (lower is better)
Translates to: ICCPAKVFISSSSFLSKKNMWIT*KNGNER
Trigger: CCGTTCATTGCCATTTTTGCAAGTGATCCACATATT...TTTCTTACTCAAGAAACTAGAAGACGAAATGAAAACCTTCGCCGGACAACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAGATCTAGGTTTACAGTaGATGGCAAAAAGACTTTTA +
Preference number: 4 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVDLGLQ*MAKRLL
Trigger: TAAAAGTCTTTTTGCCATGCACTGTAAACCTAGATC...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR GCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCACGGCCATTTATGTTTaGCTTTTTGATCGTGGTACA +
Preference number: 4 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCTAIYV*LFDRGT
Trigger: TGTACCACGATCAAAAAGGCAAACATAAATGGCCGT...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGAGTCAGTTCAGTAAATaGCAACAGTCTTACAGCTTT +
Preference number: 4 (lower is better)
Translates to: VSSVNANSLTALTFSHEKSQFSK*QQSYSF
Trigger: AAAGCTGTAAGACTGTTGGCATTTACTGAACTGACT...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR GCA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGACCTTACCTGCCAACTaGTCCATGCTGGAAATTTAT +
Preference number: 4 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKTLPAN*SMLEIY
Trigger: ATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGT...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCGATTGTGGAAAGAACTaGCTTACTGAAAACCACACT +
Preference number: 4 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCDCGKN*LTENHT
Trigger: AGTGTGGTTTTCAGTAAGCCAGTTCTTTCCACAATC...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGTTGTCTGATTCTGAGTaGAGCTGTCAATGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKLSDSE*SCQWFL
Trigger: CAAAAACCATTGACAGCTTCACTCAGAATCAGACAA...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCTTTTTATTAGACATCTaGCCAAGAGGATGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCFLLDI*PRGCCK
Trigger: CTTACAGCATCCTCTTGGTCAGATGTCTAATAAAAA...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCGATGCAGATATAAGTaGTGTCCAATTATCCAAATC +
Preference number: 4 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCRCRYK*CPIIQI
Trigger: GATTTGGATAATTGGACAGCACTTATATCTGCATCG...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp GTGGAGTCTGGCCACAAATATTTATACAAAACTGTATTAGCACCTAAAATGTCCGCATTTACAGTCAGATaGTTTGGGTCAACTCTAAAT +
Preference number: 4 (lower is better)
Translates to: VESGHKYLYKTVLAPKMSAFTVR*FGSTLN
Trigger: ATTTAGAGTTGACCCAAAGCATCTGACTGTAAATGC...GGACATTTTAGGTGCTAATACAGTTTTGTATAAATATTTGTGGCCAGACTCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCAATATGTGGATCACTTaGAAAAATGGCAATGAACGG +
Preference number: 4 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCNMWIT*KNGNER
Trigger: CCGTTCATTGCCATTTTTGCAAGTGATCCACATATT...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATGTAATCGCCCATCTTTaGGATTTCTTAAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNVIAHL*DFLKAV
Trigger: AACTGCTTTTAAGAAATCCCAAAGATGGGCGATTAC...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR TCA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGAAAGAACTGGCTTACTaGAAACCACACTTCTCTAAA +
Preference number: 4 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKKELAY*KPHFSK
Trigger: TTTAGAGAAGTGTGGTTTTCAGTAAGCCAGTTCTTT...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR TCA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGTGCATCATAATTGGATaGGTGATATCCATCGATCAT +
Preference number: 4 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKCIIIG*VISIDH
Trigger: ATGATCGATGGATATCACTCATCCAATTATGATGCA...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGTTTCAGTGTCAGGATTaGACTGTAAGATATCTCTCA +
Preference number: 4 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKFQCQD*TVRYLS
Trigger: TGAGAGATATCTTACAGTGCAATCCTGACACTGAAA...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR GCA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGTATCTGCCAGGGCACTaGTATATAAATCATATCCAA +
Preference number: 4 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKYLPGH*YINHIQ
Trigger: TTGGATATGATTTATATAGCAGTGCCCTGGCAGATA...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CCA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATATATCAGCATATTTTTaGAGAAGCGCTCGAACAATT +
Preference number: 4 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNISAYF*RSARTI
Trigger: AATTGTTCGAGCGCTTCTCCAAAAATATGCTGATAT...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CCA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCATCAATTTCAAGAAGTaGCTCAACATCCTTAGTTGT +
Preference number: 4 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCINFKK*LNILSC
Trigger: ACAACTAAGGATGTTGAGCCACTTCTTGAAATTGAT...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
3UTR CAA 72 bp TCATGGCCATTTATATTTGAATCCCGAAGCACACTATaGAGGTTCTGGTTAATTGCCTTTATGATAATATGT +
Preference number: 4 (lower is better)
Translates to: SWPFIFESRSTL*RFWLIAFMIIC
Trigger: ACATATTATCATAAAGGCAATTAACCAGAACCTCAATAGTGTGCTTCGGGATTCAAATATAAATGGCCATGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR GCA 90 bp ATTTTTAGTCTACACCATCTAGCTTATGTGTCTTTTTGTAGTCTCAAGGGTGATGATCTAGGTTTACAGTaGATGGCAAAAAGACTTTTA +
Preference number: 4 (lower is better)
Translates to: IFSLHHLAYVSFCSLKGDDLGLQ*MAKRLL
Trigger: TAAAAGTCTTTTTGCCATGCACTGTAAACCTAGATC...ATCACCCTTGAGACTACAAAAAGACACATAAGCTAGATGGTGTAGACTAAAAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS GCA 90 bp TCTCCCAACCTGGTCCTCAGCTCCGGCGGAACGGGCCCGCTCGGCTaGAGGCGATGTCAGAGGACGGGGAAGCAAGAGACGGCGACTGCA +
Preference number: 5 (lower is better)
Translates to: SPNLVLSSGGTGPLG*RRCQRTGKQETATA
Trigger: TGCAGTCGCCGTCTCTTGCTTCCCCGTCCTCTGACATCGCCTGCAGCCGAGCGGGCCCGTTCCGCCGGAGCTGAGGACCAGGTTGGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473731.5
ENST00000569008.2
CDS GCA 90 bp CGGCTGCAGGCGATGTCAGAGGACGGGGAAGCAAGAGACGGCGACTaGAAGCGCGTCGCCCTCACCACACCCGGCGGCCATATTCTTCCC +
Preference number: 5 (lower is better)
Translates to: RLQAMSEDGEARDGD*KRVALTTPGGHILP
Trigger: GGGAAGAATATGGCCGCCGGGTGTGGTGAGGGCGACGCGCTTGCAGTCGCCGTCTCTTGCTTCCCCGTCCTCTGACATCGCCTGCAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000489024.5
ENST00000496725.1
ENST00000569008.2
CDS-3UTR CAA 90 bp GCTCGTTGTGGGAAGCGCGGCGAGCAGGCTCACCGTGCGGGGCTGGGCCACTGCCACTGCTCAGTAAGGTaGATCCAGCTAGCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: ARCGKRGEQAHRAGLGHCHCSVR*IQLASL
Trigger: CAGGCTTGCTAGCTGGATCAACCTTACTGAGCAGTG...GCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCGCCGCGCTTCCCACAACGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS GCA 90 bp TTTGAATACCTGGTCCTCAGCTCCGGCGGAACGGGCCCGCTCGGCTaGAGGCGATGTCAGAGGACGGGGAAGCAAGAGACGGCGACTGCA +
Preference number: 5 (lower is better)
Translates to: FEYLVLSSGGTGPLG*RRCQRTGKQETATA
Trigger: TGCAGTCGCCGTCTCTTGCTTCCCCGTCCTCTGACATCGCCTGCAGCCGAGCGGGCCCGTTCCGCCGGAGCTGAGGACCAGGTATTCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256707.8
ENST00000319688.5
ENST00000488729.5
ENST00000489024.5
ENST00000496725.1
CDS-3UTR CAA 90 bp GCTCGTTGTGGGAAGCGCGGCGAGCAGGCTCACCGTGCGGGGCTGGGCCACTGCTTACGAGAAATTTTCTaGCATTGCTTAGTCCACGAC +
Preference number: 5 (lower is better)
Translates to: ARCGKRGEQAHRAGLGHCLREIF*HCLVHD
Trigger: GTCGTGGACTAAGCAATGCAAGAAAATTTCTCGTAA...GCAGTGGCCCAGCCCCGCACGGTGAGCCTGCTCGCCGCGCTTCCCACAACGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGATGGGAGGCACCGCCTaGCACTTTAAAATGATGGAG +
Preference number: 5 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVMGGTA*HFKMME
Trigger: CTCCATCATTTTAAAGTGCAAGGCGGTGCCTCCCAT...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTAGAGCGAGTCCAGCACTaGCCACCATGTACGACAGTT +
Preference number: 5 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVERVQH*PPCTTV
Trigger: AACTGTCGTACATGGTGGCAAGTGCTGGACTCGCTC...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp CCTGGAGCCACACTGGCTGGGCCCAGACCCTGGCTCTGCCACTCAGTAGCTGTGTCCCGAAGCACACTATaGAGGTTCTGGTTAATTGCC +
Preference number: 5 (lower is better)
Translates to: PGATLAGPRPWLCHSVAVSRSTL*RFWLIA
Trigger: GGCAATTAACCAGAACCTCAATAGTGTGCTTCGGGA...CACAGCTACTGAGTGGCAGAGCCAGGGTCTGGGCCCAGCCAGTGTGGCTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS GCA 90 bp GGGCAAAGAATGGCCTGTTGTAGAAGGGATGCTGAGGGCCCGTCATaGCGCTGTAATAGCTGCTGTGAGGCTGTGGTGACACCACTCCAC +
Preference number: 5 (lower is better)
Translates to: GQRMACCRRDAEGPS*RCNSCCEAVVTPLH
Trigger: GTGGAGTGGTGTCACCACAGCCTCACAGCAGCTATTACAGCGGCATGACGGGCCCTCAGCATCCCTTCTACAACAGGCCATTCTTTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000638224.1
CDS GCA 90 bp ATGCTCCATTTTCCCTGTTGTAGAAGGGATGCTGAGGGCCCGTCATaGCGCTGTAATAGCTGCTGTGAGGCTGTGGTGACACCACTCCAC +
Preference number: 5 (lower is better)
Translates to: MLHFPCCRRDAEGPS*RCNSCCEAVVTPLH
Trigger: GTGGAGTGGTGTCACCACAGCCTCACAGCAGCTATTACAGCGGCATGACGGGCCCTCAGCATCCCTTCTACAACAGGGAAAATGGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR CAA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTATCTTGCTACCAAGTTTaGTCATCTCCCCAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVSCYQV*SSPQGC
Trigger: ACAGCCTTGGGGAGATGACAAAACTTGGTAGCAAGA...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGTCTTGCTACCAAGTTTaGTCATCTCCCCAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWSCYQV*SSPQGC
Trigger: ACAGCCTTGGGGAGATGACAAAACTTGGTAGCAAGA...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp GGGAGCCGCCAGGGTAATACCTTGGCGTGTAAAGGTATGGGGCAAAGAATGGCTCGCCAGGGTAATACCTaGGCGTGTAAAGGTATGGGG +
Preference number: 5 (lower is better)
Translates to: GSRQGNTLACKGMGQRMARQGNT*ACKGMG
Trigger: CCCCATACCTTTACACGCCAAGGTATTACCCTGGCG...AGCCATTCTTTGCCCCATACCTTTACACGCCAAGGTATTACCCTGGCGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR CAA 90 bp GCCACATGCGTCACTTCCAGGCCTGGGCGTGTGCATCCTCCACTCTCTTCCCCTACTGCACCCAGTAATTaGAAGGCACTGTGTAGGATT +
Preference number: 5 (lower is better)
Translates to: ATCVTSRPGRVHPPLSSPTAPSN*KALCRI
Trigger: AATCCTACACAGTGCCTTCAAATTACTGGGTGCAGT...AGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp AGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGGAGCGAGTCCAGCACTaGCCACCATGTACGACAGTT +
Preference number: 5 (lower is better)
Translates to: SLHASSPVGNPHQRLVAKERVQH*PPCTTV
Trigger: AACTGTCGTACATGGTGGCAAGTGCTGGACTCGCTC...CTTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp GCCACATGCGTCACTTCCAGGCCTGGGCGTGTGCATCCTCCACTCTCTTCCCCTCAAGAACTGGGGTCCTaGAAGACAAAAACACTTCAA +
Preference number: 5 (lower is better)
Translates to: ATCVTSRPGRVHPPLSSPQELGS*KTKTLQ
Trigger: TTGAAGTGTTTTTGTCTTCAAGGACCCCAGTTCTTG...AGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp TTTGAGAATGTAGTGAGCTATGACCACACCGGTTACACTCAAGCCTGGGCGAGACCTGCGAAGGGCCCATaGAAGGACGTGGAAGAGCAC +
Preference number: 5 (lower is better)
Translates to: FENVVSYDHTGYTQAWARPAKGP*KDVEEH
Trigger: GTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCAGG...TCTCGCCCAGGCTTGAGTGTAACCGGTGTGGTCATAGCTCACTACATTCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp TGCGAAGGGCCCATTGAAGGACGTGGAAGAGCACACGGATGGGGGCTGGCTGTAAGAGCCTTGTGTAACTaGAACGTTGGCTTCGCTTAT +
Preference number: 5 (lower is better)
Translates to: CEGPIEGRGRAHGWGLAVRALCN*NVGFAY
Trigger: ATAAGCGAAGCCAACGTTCAAGTTACACAAGGCTCT...TACAGCCAGCCCCCATCCGTGTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp GCCACATGCGTCACTTCCAGGCCTGGGCGTGTGCATCCTCCACTCTCTTCCCCTATAATTTCCCGTAGTTaGGGATCTAGGTTTACAGTG +
Preference number: 5 (lower is better)
Translates to: ATCVTSRPGRVHPPLSSPIISRS*GSRFTV
Trigger: CACTGTAAACCTAGATCCCAAACTACGGGAAATTAT...AGGGGAAGAGAGTGGAGGATGCACACGCCCAGGCCTGGAAGTGACGCATGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp CGAGCAGATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGCCTGCGAAGGGCCCATaGAAGGACGTGGAAGAGCAC +
Preference number: 5 (lower is better)
Translates to: RADPAQSPYVPPLMQSSKPAKGP*KDVEEH
Trigger: GTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCAGG...CTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATCTGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGTCAATGTTTCTCATCTaGGTAGCCTTTATAAGTGGC +
Preference number: 5 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWSMFLI*VAFISG
Trigger: GCCACTTATAAAGGCTACCAAGATGAGAAACATTGA...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGAGCGAGTCCAGCACTaGCCACCATGTACGACAGTT +
Preference number: 5 (lower is better)
Translates to: PFCHTADVSFTSASSSVSERVQH*PPCTTV
Trigger: AACTGTCGTACATGGTGGCAAGTGCTGGACTCGCTC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp AGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGATGGAGGCGTTTTCTTaGGGAATTCAGGAGCGAGTC +
Preference number: 5 (lower is better)
Translates to: SLHASSPVGNPHQRLVAKMEAFS*GIQERV
Trigger: GACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCAT...CTTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCACTGCTCAGTAAGGTaGATCCAGCTAGCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRHCSVR*IQLASL
Trigger: CAGGCTTGCTAGCTGGATCAACCTTACTGAGCAGTG...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCCTGCGAAGGGCCCATaGAAGGACGTGGAAGAGCAC +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSPAKGP*KDVEEH
Trigger: GTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCAGG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTCCCATCATCGGGCTTaGGTTCACTATCCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: PFCHTADVSFTSASSSVSSHHRA*VHYPSP
Trigger: AGGGGAAGGATAGTGAACCAAAGCCCGATGATGGGA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGCTGGAGCACTATTGTaGTTCAGAGTCACGGTGCTG +
Preference number: 5 (lower is better)
Translates to: PFCHTADVSFTSASSSVSAGALL*FRVTVL
Trigger: CAGCACCGTGACTCTGAACAACAATAGTGCTCCAGC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GGCTGGAGCACTATTGTTGTTCAGAGTCACGGTGCTGGGAGTTCGGTTCAGGTTGATCTTTGGAGAGCCTaGTGTAACTTGAACGTTGGC +
Preference number: 5 (lower is better)
Translates to: GWSTIVVQSHGAGSSVQVDLWRA*CNLNVG
Trigger: GCCAACGTTCAAGTTACACAAGGCTCTCCAAAGATC...AACCTGAACCGAACTCCCAGCACCGTGACTCTGAACAACAATAGTGCTCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp ACTGTGGGTGAAGTCTGTGGACGGGGAAGCCACATGCGTCACTTCCAGGCCTGGTTAGGTCTTAGAACATaGTCAGATACACAGTGTGTT +
Preference number: 5 (lower is better)
Translates to: TVGEVCGRGSHMRHFQAWLGLRT*SDTQCV
Trigger: AACACACTGTGTATCTGACAATGTTCTAAGACCTAA...CCAGGCCTGGAAGTGACGCATGTGGCTTCCCCGTCCACAGACTTCACCCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTATGGAGGCGTTTTCTTaGGGAATTCAGGAGCGAGTC +
Preference number: 5 (lower is better)
Translates to: PFCHTADVSFTSASSSVSMEAFS*GIQERV
Trigger: GACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCAT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp AGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGAGCTGTCAATGGTTTTaGCCATCCTGGCCATCAATT +
Preference number: 5 (lower is better)
Translates to: SLHASSPVGNPHQRLVAKSCQWF*PSWPSI
Trigger: AATTGATGGCCAGGATGGCAAAAACCATTGACAGCT...CTTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp AGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCTAGTGGCAAAGGTCCAGCCCTTCTATTaGTTTCAGCTTCTCACATAC +
Preference number: 5 (lower is better)
Translates to: SLHASSPVGNPHQRLVAKVQPFY*FQLLTY
Trigger: GTATGTGAGAAGCTGAAACAAATAGAAGGGCTGGAC...CTTTGCCACTAGACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp CGAGCAGATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGGCTGGAGCACTATTGTaGTTCAGAGTCACGGTGCTG +
Preference number: 5 (lower is better)
Translates to: RADPAQSPYVPPLMQSSKAGALL*FRVTVL
Trigger: CAGCACCGTGACTCTGAACAACAATAGTGCTCCAGC...CTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATCTGCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTTGGCTGGAGCACTATaGTTGTTCAGAGTCACGGTG +
Preference number: 5 (lower is better)
Translates to: PFCHTADVSFTSASSSVSLAGAL*LFRVTV
Trigger: CACCGTGACTCTGAACAACAATAGTGCTCCAGCCAA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTCCGTATGTCCCTCCTTaGATGCAATCATCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRPYVPP*MQSSKL
Trigger: CAGCTTTGATGATTGCATCAAAGGAGGGACATACGG...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGAGCGAGTCCAGCACTaGCCACCATGTACGACAGTT +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKERVQH*PPCTTV
Trigger: AACTGTCGTACATGGTGGCAAGTGCTGGACTCGCTC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACCTGCGAAGGGCCCATaGAAGGACGTGGAAGAGCAC +
Preference number: 5 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVPAKGP*KDVEEH
Trigger: GTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCAGG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAACGCCAGGGTAATACCTaGGCGTGTAAAGGTATGGGG +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKRQGNT*ACKGMG
Trigger: CCCCATACCTTTACACGCCAAGGTATTACCCTGGCG...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256707.8
ENST00000473731.5
CDS-3UTR CAA 90 bp AAACAGAACTCGGACAGTGTCCAGCATCTGAAGGACTTTGTCCTGCTCACAGGCGTCCAGCCCTTCTATTaGTTTCAGCTTCTCACATAC +
Preference number: 5 (lower is better)
Translates to: KQNSDSVQHLKDFVLLTGVQPFY*FQLLTY
Trigger: GTATGTGAGAAGCTGAAACAAATAGAAGGGCTGGAC...GCCTGTGAGCAGGACAAAGTCCTTCAGATGCTGGACACTGTCCGAGTTCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp AAGCGTGTTCAGCTCTTCGAAGCTGAAGTTGAGTGTGTAGGGCGTCTGGCTGGACTGTCTTTGTCATCTTaGAGCAGTGGAGTGTTATCT +
Preference number: 5 (lower is better)
Translates to: KRVQLFEAEVECVGRLAGLSLSS*SSGVLS
Trigger: AGATAACACTCCACTGCTCAAAGATGACAAAGACAG...TCCAGCCAGACGCCCTACACACTCAACTTCAGCTTCGAAGAGCTGAACACGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTAGCTATAATTGGATCTaGCAGGCCACTCAGGCTATG +
Preference number: 5 (lower is better)
Translates to: PFCHTADVSFTSASSSVSSYNWI*QATQAM
Trigger: CATAGCCTGAGTGGCCTGCAAGATCCAATTATAGCT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTGATCTTTGGAGAGCCTaGTGTAACTTGAACGTTGGC +
Preference number: 5 (lower is better)
Translates to: PFCHTADVSFTSASSSVSDLWRA*CNLNVG
Trigger: GCCAACGTTCAAGTTACACAAGGCTCTCCAAAGATC...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTGCGTTTCACCATCCTTaGTGCATATTTCAGTGTCAG +
Preference number: 5 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRAFHHP*CIFQCQ
Trigger: CTGACACTGAAATATGCACAAAGGATGGTGAAACGC...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGGAGAGGCTCAATCTGTaGTCCGGCGAAGGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: VKLHLSPILNLTCLWEAEERLNL*SGEGFH
Trigger: ATGAAAACCTTCGCCGGACAACAGATTGAGCCTCTC...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCACTGCTCAGTAAGGTaGATCCAGCTAGCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSHCSVR*IQLASL
Trigger: CAGGCTTGCTAGCTGGATCAACCTTACTGAGCAGTG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCCACTGCTCAGTAAGGTaGATCCAGCTAGCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLHCSVR*IQLASL
Trigger: CAGGCTTGCTAGCTGGATCAACCTTACTGAGCAGTG...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTCCCATCATCGGGCTTaGGTTCACTATCCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKSHHRA*VHYPSP
Trigger: AGGGGAAGGATAGTGAACCAAAGCCCGATGATGGGA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp TCTTTGGGATTTCTTAAAAGCAGTTCTGCCAGTTTCCGGCTCCTTCCACGAATATCCCATCATCGGGCTTaGGTTCACTATCCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: SLGFLKSSSASFRLLPRISHHRA*VHYPSP
Trigger: AGGGGAAGGATAGTGAACCAAAGCCCGATGATGGGA...TATTCGTGGAAGGAGCCGGAAACTGGCAGAACTGCTTTTAAGAAATCCCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGTCACTTGGGAGTTTTaGATAGCGCAGCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKVTWEF*IAQPTS
Trigger: GGAAGTGGGCTGCGCTATCAAAAACTCCCAAGTGAC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGCTGTATGTCACTTGGGAGTTTTaGATAGCGCAGCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: DPAQSPYVPPLMQSSKLYVTWEF*IAQPTS
Trigger: GGAAGTGGGCTGCGCTATCAAAAACTCCCAAGTGAC...ATACAGCTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGCTGGAGCACTATTGTaGTTCAGAGTCACGGTGCTG +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSAGALL*FRVTVL
Trigger: CAGCACCGTGACTCTGAACAACAATAGTGCTCCAGC...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTAGGCCTCAAAATGACTaGAGAAGTCTCCCTAATTCC +
Preference number: 5 (lower is better)
Translates to: PFCHTADVSFTSASSSVSRPQND*RSLPNS
Trigger: GGAATTAGGGAGACTTCTCAAGTCATTTTGAGGCCT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp AAAGCCAAACTCTCTTTCACAAGCATCCGAGAGGGTTGCAATCATTTCAGCCAGCCAAATAATAATAGCTaGGCTTGCCGGACGCGATGG +
Preference number: 5 (lower is better)
Translates to: KAKLSFTSIREGCNHFSQPNNNS*ACRTRW
Trigger: CCATCGCGTCCGGCAAGCCAAGCTATTATTATTTGG...CTGGCTGAAATGATTGCAACCCTCTCGGATGCTTGTGAAAGAGAGTTTGGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp CATCCCGAGCCCATTAATACTGATAGAGATACAACTCCACATAACCACGCCATACGGGGTTTCACCATGTaGGCTAGGTTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: HPEPINTDRDTTPHNHAIRGFTM*ARLVLN
Trigger: GTTCAAGACCAACCTAGCCAACATGGTGAAACCCCG...TATGGCGTGGTTATGTGGAGTTGTATCTCTATCAGTATTAATGGGCTCGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGAGAGGCTCAATCTGTaGTCCGGCGAAGGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKERLNL*SGEGFH
Trigger: ATGAAAACCTTCGCCGGACAACAGATTGAGCCTCTC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGAGAGGCTCAATCTGTaGTCCGGCGAAGGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKERLNL*SGEGFH
Trigger: ATGAAAACCTTCGCCGGACAACAGATTGAGCCTCTC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGAAGCATCCGAGAGGGTaGCAATCATTTCAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKKHPRG*QSFQPE
Trigger: CTCTGGCTGAAATGATTGCAACCCTCTCGGATGCTT...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAAAGCATCCGAGAGGGTaGCAATCATTTCAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKKHPRG*QSFQPE
Trigger: CTCTGGCTGAAATGATTGCAACCCTCTCGGATGCTT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAATGGAGGCGTTTTCTTaGGGAATTCAGGAGCGAGTC +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKMEAFS*GIQERV
Trigger: GACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCAT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp TCTTTGGGATTTCTTAAAAGCAGTTCTGCCAGTTTCCGGCTCCTTCCACGAATAATGGAGGCGTTTTCTTaGGGAATTCAGGAGCGAGTC +
Preference number: 5 (lower is better)
Translates to: SLGFLKSSSASFRLLPRIMEAFS*GIQERV
Trigger: GACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCAT...TATTCGTGGAAGGAGCCGGAAACTGGCAGAACTGCTTTTAAGAAATCCCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp TTGCTTAGTCCACGACTATTAAGGAACACAGGCAAGTGGACTATGTTGCGCATGTCCCGAAGCACACTATaGAGGTTCTGGTTAATTGCC +
Preference number: 5 (lower is better)
Translates to: LLSPRLLRNTGKWTMLRMSRSTL*RFWLIA
Trigger: GGCAATTAACCAGAACCTCAATAGTGTGCTTCGGGA...CATGCGCAACATAGTCCACTTGCCTGTGTTCCTTAATAGTCGTGGACTAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTATGGAACGTCTCCATTaGTTGCTGAAGTTACGAGAA +
Preference number: 5 (lower is better)
Translates to: PFCHTADVSFTSASSSVSMERLH*LLKLRE
Trigger: TTCTCGTAACTTCAGCAACAAATGGAGACGTTCCAT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCAAGAACTGGGGTCCTaGAAGACAAAAACACTTCAA +
Preference number: 5 (lower is better)
Translates to: PFCHTADVSFTSASSSVSQELGS*KTKTLQ
Trigger: TTGAAGTGTTTTTGTCTTCAAGGACCCCAGTTCTTG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAACTGGAATCCTGGGAATaGAGACTCGAAAGACTTGGG +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKLESWE*RLERLG
Trigger: CCCAAGTCTTTCGAGTCTCAATTCCCAGGATTCCAG...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp ATACTCTTTGGCTTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTGGAGACTGGAATCCTGGGAATaGAGACTCGAAAGACTTGGG +
Preference number: 5 (lower is better)
Translates to: ILFGFNEGSDRLSTVFWRLESWE*RLERLG
Trigger: CCCAAGTCTTTCGAGTCTCAATTCCCAGGATTCCAG...TCTCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAAGCCAAAGAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp TTGCTTAGTCCACGACTATTAAGGAACACAGGCAAGTGGACTATGTTGCGCATGTCCGATGAATCCTTTTaGTCAAGGAGCGCATCCGAT +
Preference number: 5 (lower is better)
Translates to: LLSPRLLRNTGKWTMLRMSDESF*SRSASD
Trigger: ATCGGATGCGCTCCTTGACAAAAAGGATTCATCGGA...CATGCGCAACATAGTCCACTTGCCTGTGTTCCTTAATAGTCGTGGACTAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp AAGGTTGATCCAGCTAGCAAGCCTGTCCCAGTTGAAACTAATCTGATTGGCTCTAGCTATAATTGGATCTaGCAGGCCACTCAGGCTATG +
Preference number: 5 (lower is better)
Translates to: KVDPASKPVPVETNLIGSSYNWI*QATQAM
Trigger: CATAGCCTGAGTGGCCTGCAAGATCCAATTATAGCT...AGAGCCAATCAGATTAGTTTCAACTGGGACAGGCTTGCTAGCTGGATCAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTTGGCTGGAGCACTATaGTTGTTCAGAGTCACGGTG +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSLAGAL*LFRVTV
Trigger: CACCGTGACTCTGAACAACAATAGTGCTCCAGCCAA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp CGAGCAGATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGAGGCCTCAAAATGACTaGAGAAGTCTCCCTAATTCC +
Preference number: 5 (lower is better)
Translates to: RADPAQSPYVPPLMQSSKRPQND*RSLPNS
Trigger: GGAATTAGGGAGACTTCTCAAGTCATTTTGAGGCCT...CTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATCTGCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS TCA 90 bp TCCACATCAGCTCCCATGGCCAATAAATGTTTCACACATTCCAAATaGCCCTTTCGTGCAGCCCAAACTAAAGGGGTGGTTCCATACTAT +
Preference number: 5 (lower is better)
Translates to: STSAPMANKCFTHSK*PFRAAQTKGVVPYY
Trigger: ATAGTATGGAACCACCCCTTTAGTTTGGGCTGCACGAAAGGGTCATTTGGAATGTGTGAAACATTTATTGGCCATGGGAGCTGATGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471275.1
CDS-3UTR CAA 90 bp AAGGTTGATCCAGCTAGCAAGCCTGTCCCAGTTGAAACTAATCTGATTGGCTCTTATTTCCAGATTGCCTaGTTCGGCAGCTATCATCAG +
Preference number: 5 (lower is better)
Translates to: KVDPASKPVPVETNLIGSYFQIA*FGSYHQ
Trigger: CTGATGATAGCTGCCGAACAAGGCAATCTGGAAATA...AGAGCCAATCAGATTAGTTTCAACTGGGACAGGCTTGCTAGCTGGATCAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp TCCAGATTGCCTTGTTCGGCAGCTATCATCAGTGGAGTCTGGCCACAAATATTTTTCACTATTTCCAGATaGCCTTGTTCGGCAGCTATC +
Preference number: 5 (lower is better)
Translates to: SRLPCSAAIISGVWPQIFFTISR*PCSAAI
Trigger: GATAGCTGCCGAACAAGGCAATCTGGAAATAGTGAA...AAATATTTGTGGCCAGACTCCACTGATGATAGCTGCCGAACAAGGCAATCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTCCAAATCTTCCAGATaGCAGTTAGCTCCATTCTTA +
Preference number: 5 (lower is better)
Translates to: PFCHTADVSFTSASSSVSSKSSR*QLAPFL
Trigger: TAAGAATGGAGCTAACTGCAATCTGGAAGATTTGGA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTACTTATCAGAGCAGTaGACTTTAGCACCATTTTGC +
Preference number: 5 (lower is better)
Translates to: PFCHTADVSFTSASSSVSYLSEQ*TLAPFC
Trigger: GCAAAATGGTGCTAAAGTCAACTGCTCTGATAAGTA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCCGTATGTCCCTCCTTaGATGCAATCATCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSPYVPP*MQSSKL
Trigger: CAGCTTTGATGATTGCATCAAAGGAGGGACATACGG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTCAATGTTTCTCATCTaGGTAGCCTTTATAAGTGGC +
Preference number: 5 (lower is better)
Translates to: PFCHTADVSFTSASSSVSSMFLI*VAFISG
Trigger: GCCACTTATAAAGGCTACCAAGATGAGAAACATTGA...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTAGTAATCGCCCATCTTaGGGATTTCTTAAAAGCAGT +
Preference number: 5 (lower is better)
Translates to: PFCHTADVSFTSASSSVSSNRPS*GFLKSS
Trigger: ACTGCTTTTAAGAAATCCCAAAGATGGGCGATTACT...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGTTCAATTTGTGCAGTTaGGAGGCTGCATTATGGAGG +
Preference number: 5 (lower is better)
Translates to: VKLHLSPILNLTCLWEAEFNLCS*EAALWR
Trigger: CCTCCATAATGCAGCCTCCAAACTGCACAAATTGAA...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGCCTTCACTTTTCAATTaGTGCAGTTTGGAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: VKLHLSPILNLTCLWEAEPSLFN*CSLEAA
Trigger: TGCAGCCTCCAAACTGCACAAATTGAAAAGTGAAGG...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp CCCTTCTGTCACACTGCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTCATGGCCATTTATATTaGAATCCCGAAGCACACTAT +
Preference number: 5 (lower is better)
Translates to: PFCHTADVSFTSASSSVSHGHLY*NPEAHY
Trigger: ATAGTGTGCTTCGGGATTCAAATATAAATGGCCATG...ACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGCAGTGTGACAGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp TGTTACAAGATGAGTCTCCATGCTTCATCGCCTGTGGGGAATCCTCATCAGCGTTTACGAGAAATTTTCTaGCATTGCTTAGTCCACGAC +
Preference number: 5 (lower is better)
Translates to: CYKMSLHASSPVGNPHQRLREIF*HCLVHD
Trigger: GTCGTGGACTAAGCAATGCAAGAAAATTTCTCGTAA...ACGCTGATGAGGATTCCCCACAGGCGATGAAGCATGGAGACTCATCTTGTAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATCTTGCTACCAAGTTTaGTCATCTCCCCAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKSCYQV*SSPQGC
Trigger: ACAGCCTTGGGGAGATGACAAAACTTGGTAGCAAGA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTCTTGCTACCAAGTTTaGTCATCTCCCCAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKSCYQV*SSPQGC
Trigger: ACAGCCTTGGGGAGATGACAAAACTTGGTAGCAAGA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACACTGCTCAGTAAGGTaGATCCAGCTAGCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVHCSVR*IQLASL
Trigger: CAGGCTTGCTAGCTGGATCAACCTTACTGAGCAGTG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp ATTTTTAGTCTACACCATCTAGCTTATGTGTCTTTTTGTAGTCTCAAGGGTGATCCTGCGAAGGGCCCATaGAAGGACGTGGAAGAGCAC +
Preference number: 5 (lower is better)
Translates to: IFSLHHLAYVSFCSLKGDPAKGP*KDVEEH
Trigger: GTGCTCTTCCACGTCCTTCAATGGGCCCTTCGCAGG...ATCACCCTTGAGACTACAAAAAGACACATAAGCTAGATGGTGTAGACTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTCAGCAGCATCCTCCTaGATAACTTCTAGGCCATTG +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKSAASS*ITSRPL
Trigger: CAATGGCCTAGAAGTTATCAAGGAGGATGCTGCTGA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256707.8
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCTGTCTGGAAGAGGCTaGACCTTTCGGAAGATTTCT +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSLSGRG*TFRKIS
Trigger: AGAAATCTTCCGAAAGGTCAAGCCTCTTCCAGACAG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCTGTCTGGAAGAGGCTaGACCTTTCGGAAGATTTCT +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKLSGRG*TFRKIS
Trigger: AGAAATCTTCCGAAAGGTCAAGCCTCTTCCAGACAG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAGTCACTTGGGAGTTTTaGATAGCGCAGCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVVTWEF*IAQPTS
Trigger: GGAAGTGGGCTGCGCTATCAAAAACTCCCAAGTGAC...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTAGCTATAATTGGATCTaGCAGGCCACTCAGGCTATG +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSSYNWI*QATQAM
Trigger: CATAGCCTGAGTGGCCTGCAAGATCCAATTATAGCT...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGATCTTTGGAGAGCCTaGTGTAACTTGAACGTTGGC +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKDLWRA*CNLNVG
Trigger: GCCAACGTTCAAGTTACACAAGGCTCTCCAAAGATC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GATCTAGGATTTGGTCTAAAAGATATCTCGAGGCTCTTTCCCAATCTATTGCTCGAGGGCAGCAAGGGGTaGTCACTGAAGATAACTAGC +
Preference number: 5 (lower is better)
Translates to: DLGFGLKDISRLFPNLLLEGSKG*SLKITS
Trigger: GCTAGTTATCTTCAGTGACAACCCCTTGCTGCCCTC...GAGCAATAGATTGGGAAAGAGCCTCGAGATATCTTTTAGACCAAATCCTAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTATTTCCAGATTGCCTaGTTCGGCAGCTATCATCAG +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKYFQIA*FGSYHQ
Trigger: CTGATGATAGCTGCCGAACAAGGCAATCTGGAAATA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp CATCCCGAGCCCATTAATACTGATAGAGATACAACTCCACATAACCACGCCATATATTTCCAGATTGCCTaGTTCGGCAGCTATCATCAG +
Preference number: 5 (lower is better)
Translates to: HPEPINTDRDTTPHNHAIYFQIA*FGSYHQ
Trigger: CTGATGATAGCTGCCGAACAAGGCAATCTGGAAATA...TATGGCGTGGTTATGTGGAGTTGTATCTCTATCAGTATTAATGGGCTCGGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTTCACTATTTCCAGATaGCCTTGTTCGGCAGCTATC +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKFTISR*PCSAAI
Trigger: GATAGCTGCCGAACAAGGCAATCTGGAAATAGTGAA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCTTCACTATTTCCAGATaGCCTTGTTCGGCAGCTATC +
Preference number: 5 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLFTISR*PCSAAI
Trigger: GATAGCTGCCGAACAAGGCAATCTGGAAATAGTGAA...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp CGAGCAGATCCTGCACAATCTCCGTATGTCCCTCCTTTGATGCAATCATCAAAGATTTCAGTGTCAGGATaGCACTGTAAGATATCTCTC +
Preference number: 5 (lower is better)
Translates to: RADPAQSPYVPPLMQSSKISVSG*HCKISL
Trigger: GAGAGATATCTTACAGTGCAATCCTGACACTGAAAT...CTTTGATGATTGCATCAAAGGAGGGACATACGGAGATTGTGCAGGATCTGCTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGCGTTTCACCATCCTTaGTGCATATTTCAGTGTCAG +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSAFHHP*CIFQCQ
Trigger: CTGACACTGAAATATGCACAAAGGATGGTGAAACGC...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATGAGCGAGTCCAGCACTaGCCACCATGTACGACAGTT +
Preference number: 5 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNERVQH*PPCTTV
Trigger: AACTGTCGTACATGGTGGCAAGTGCTGGACTCGCTC...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTTCAATTTGTGCAGTTaGGAGGCTGCATTATGGAGG +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKFNLCS*EAALWR
Trigger: CCTCCATAATGCAGCCTCCAAACTGCACAAATTGAA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCCTTCACTTTTCAATTaGTGCAGTTTGGAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSPSLFN*CSLEAA
Trigger: TGCAGCCTCCAAACTGCACAAATTGAAAAGTGAAGG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCCCTTCACTTTTCAATTaGTGCAGTTTGGAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLPSLFN*CSLEAA
Trigger: TGCAGCCTCCAAACTGCACAAATTGAAAAGTGAAGG...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAACCTTCACTTTTCAATTaGTGCAGTTTGGAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKPSLFN*CSLEAA
Trigger: TGCAGCCTCCAAACTGCACAAATTGAAAAGTGAAGG...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAAGCTGTCAATGGTTTTaGCCATCCTGGCCATCAATT +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKSCQWF*PSWPSI
Trigger: AATTGATGGCCAGGATGGCAAAAACCATTGACAGCT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp TCTTTGGGATTTCTTAAAAGCAGTTCTGCCAGTTTCCGGCTCCTTCCACGAATAAGCTGTCAATGGTTTTaGCCATCCTGGCCATCAATT +
Preference number: 5 (lower is better)
Translates to: SLGFLKSSSASFRLLPRISCQWF*PSWPSI
Trigger: AATTGATGGCCAGGATGGCAAAAACCATTGACAGCT...TATTCGTGGAAGGAGCCGGAAACTGGCAGAACTGCTTTTAAGAAATCCCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGATGGAACGTCTCCATTaGTTGCTGAAGTTACGAGAA +
Preference number: 5 (lower is better)
Translates to: VKLHLSPILNLTCLWEAEMERLH*LLKLRE
Trigger: TTCTCGTAACTTCAGCAACAAATGGAGACGTTCCAT...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAACTATTGAGGGCTGTCTaGCTACCAAGTTTTGTCATC +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKLLRAV*LPSFVI
Trigger: GATGACAAAACTTGGTAGCAAGACAGCCCTCAATAG...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCTATTGAGGGCTGTCTaGCTACCAAGTTTTGTCATC +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSLLRAV*LPSFVI
Trigger: GATGACAAAACTTGGTAGCAAGACAGCCCTCAATAG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp ATACTCTTTGGCTTTAATGAAGGTTCTGATCGGCTCAGCACTGTGTTCTGGAGACTATTGAGGGCTGTCTaGCTACCAAGTTTTGTCATC +
Preference number: 5 (lower is better)
Translates to: ILFGFNEGSDRLSTVFWRLLRAV*LPSFVI
Trigger: GATGACAAAACTTGGTAGCAAGACAGCCCTCAATAG...TCTCCAGAACACAGTGCTGAGCCGATCAGAACCTTCATTAAAGCCAAAGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAGTCCAGCCCTTCTATTaGTTTCAGCTTCTCACATAC +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKVQPFY*FQLLTY
Trigger: GTATGTGAGAAGCTGAAACAAATAGAAGGGCTGGAC...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACTGGAATCCTGGGAATaGAGACTCGAAAGACTTGGG +
Preference number: 5 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVLESWE*RLERLG
Trigger: CCCAAGTCTTTCGAGTCTCAATTCCCAGGATTCCAG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTATTCATCCTCGTCACTaGGGAGTTTTTGATAGCGCA +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSIHPRH*GVFDSA
Trigger: TGCGCTATCAAAAACTCCCAAGTGACGAGGATGAAT...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGAGGCCTCAAAATGACTaGAGAAGTCTCCCTAATTCC +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKRPQND*RSLPNS
Trigger: GGAATTAGGGAGACTTCTCAAGTCATTTTGAGGCCT...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGTTCACTATTTCCAGATaGCCTTGTTCGGCAGCTATC +
Preference number: 5 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISFTISR*PCSAAI
Trigger: GATAGCTGCCGAACAAGGCAATCTGGAAATAGTGAA...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGTCCAAATCTTCCAGATaGCAGTTAGCTCCATTCTTA +
Preference number: 5 (lower is better)
Translates to: VKLHLSPILNLTCLWEAESKSSR*QLAPFL
Trigger: TAAGAATGGAGCTAACTGCAATCTGGAAGATTTGGA...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACCGTATGTCCCTCCTTaGATGCAATCATCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVPYVPP*MQSSKL
Trigger: CAGCTTTGATGATTGCATCAAAGGAGGGACATACGG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACAGAGAGGCTCAATCTGTaGTCCGGCGAAGGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTERLNL*SGEGFH
Trigger: ATGAAAACCTTCGCCGGACAACAGATTGAGCCTCTC...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp CTTTGGGTCAACTCTAAATATAGCCAGAAGAGTAATTCCAGATATAATGCAGCCGAGAGGCTCAATCTGTaGTCCGGCGAAGGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: LWVNSKYSQKSNSRYNAAERLNL*SGEGFH
Trigger: ATGAAAACCTTCGCCGGACAACAGATTGAGCCTCTC...GGCTGCATTATATCTGGAATTACTCTTCTGGCTATATTTAGAGTTGACCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGAAGCATCCGAGAGGGTaGCAATCATTTCAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: VSSVNANSLTALTFSHEKKHPRG*QSFQPE
Trigger: CTCTGGCTGAAATGATTGCAACCCTCTCGGATGCTT...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACAATGGAGGCGTTTTCTTaGGGAATTCAGGAGCGAGTC +
Preference number: 5 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTMEAFS*GIQERV
Trigger: GACTCGCTCCTGAATTCCCAAAGAAAACGCCTCCAT...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATCCCGAAGCACACTATaGAGGTTCTGGTTAATTGCC +
Preference number: 5 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVSRSTL*RFWLIA
Trigger: GGCAATTAACCAGAACCTCAATAGTGTGCTTCGGGA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp TTGCTTAGTCCACGACTATTAAGGAACACAGGCAAGTGGACTATGTTGCGCATGGAACGTCTCCATTTGTaGCTGAAGTTACGAGAAATT +
Preference number: 5 (lower is better)
Translates to: LLSPRLLRNTGKWTMLRMERLHL*LKLREI
Trigger: AATTTCTCGTAACTTCAGCAACAAATGGAGACGTTC...CATGCGCAACATAGTCCACTTGCCTGTGTTCCTTAATAGTCGTGGACTAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGATGGAACGTCTCCATTaGTTGCTGAAGTTACGAGAA +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKMERLH*LLKLRE
Trigger: TTCTCGTAACTTCAGCAACAAATGGAGACGTTCCAT...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCAAGAACTGGGGTCCTaGAAGACAAAAACACTTCAA +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSQELGS*KTKTLQ
Trigger: TTGAAGTGTTTTTGTCTTCAAGGACCCCAGTTCTTG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGCTGTCTTTGTCATCTTaGAGCAGTGGAGTGTTATCT +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKLSLSS*SSGVLS
Trigger: AGATAACACTCCACTGCTCAAAGATGACAAAGACAG...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTCTGTCTTTGTCATCTTaGAGCAGTGGAGTGTTATCT +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSLSLSS*SSGVLS
Trigger: AGATAACACTCCACTGCTCAAAGATGACAAAGACAG...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATCCGATGAATCCTTTTaGTCAAGGAGCGCATCCGAT +
Preference number: 5 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVSDESF*SRSASD
Trigger: ATCGGATGCGCTCCTTGACAAAAAGGATTCATCGGA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GAGTTAAAATACTCTTCTGATGGCTACAGTCAATATTATAAGGAGTCTCGCCTGTTGGCTGGAGCACTATaGTTGTTCAGAGTCACGGTG +
Preference number: 5 (lower is better)
Translates to: ELKYSSDGYSQYYKESRLLAGAL*LFRVTV
Trigger: CACCGTGACTCTGAACAACAATAGTGCTCCAGCCAA...CAGGCGAGACTCCTTATAATATTGACTGTAGCCATCAGAAGAGTATTTTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp TCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCACACTCAACTACCCATTCCGTaGTCTCATGAAGGCCAGTAC +
Preference number: 5 (lower is better)
Translates to: SVNANSLTALTFSHEKHTQLPIP*SHEGQY
Trigger: GTACTGGCCTTCATGAGACAACGGAATGGGTAGTTG...AGTGTGCTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp GTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCCTTTGGGAGGCTGAGATTTCGTTTCTTGGATaGTGGAAAGAACTGGCTTAC +
Preference number: 5 (lower is better)
Translates to: VKLHLSPILNLTCLWEAEISFLG*WKELAY
Trigger: GTAAGCCAGTTCTTTCCACAATCCAAGAAACGAAAT...CTCAGCCTCCCAAAGGCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATATTTCCAGATTGCCTaGTTCGGCAGCTATCATCAG +
Preference number: 5 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVYFQIA*FGSYHQ
Trigger: CTGATGATAGCTGCCGAACAAGGCAATCTGGAAATA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATTCACTATTTCCAGATaGCCTTGTTCGGCAGCTATC +
Preference number: 5 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVFTISR*PCSAAI
Trigger: GATAGCTGCCGAACAAGGCAATCTGGAAATAGTGAA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTCCAAATCTTCCAGATaGCAGTTAGCTCCATTCTTA +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKSKSSR*QLAPFL
Trigger: TAAGAATGGAGCTAACTGCAATCTGGAAGATTTGGA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTACTTATCAGAGCAGTaGACTTTAGCACCATTTTGC +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSYLSEQ*TLAPFC
Trigger: GCAAAATGGTGCTAAAGTCAACTGCTCTGATAAGTA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATACTTATCAGAGCAGTaGACTTTAGCACCATTTTGC +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKYLSEQ*TLAPFC
Trigger: GCAAAATGGTGCTAAAGTCAACTGCTCTGATAAGTA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp CATCCCGAGCCCATTAATACTGATAGAGATACAACTCCACATAACCACGCCATATACTTATCAGAGCAGTaGACTTTAGCACCATTTTGC +
Preference number: 5 (lower is better)
Translates to: HPEPINTDRDTTPHNHAIYLSEQ*TLAPFC
Trigger: GCAAAATGGTGCTAAAGTCAACTGCTCTGATAAGTA...TATGGCGTGGTTATGTGGAGTTGTATCTCTATCAGTATTAATGGGCTCGGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp TCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCACACTCCGTATGTCCCTCCTTaGATGCAATCATCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: SVNANSLTALTFSHEKHTPYVPP*MQSSKL
Trigger: CAGCTTTGATGATTGCATCAAAGGAGGGACATACGG...AGTGTGCTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTATTTCAGTGTCAGGATaGCACTGTAAGATATCTCTC +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSISVSG*HCKISL
Trigger: GAGAGATATCTTACAGTGCAATCCTGACACTGAAAT...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGATTTCAGTGTCAGGATaGCACTGTAAGATATCTCTC +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKISVSG*HCKISL
Trigger: GAGAGATATCTTACAGTGCAATCCTGACACTGAAAT...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAGCGTTTCACCATCCTTaGTGCATATTTCAGTGTCAG +
Preference number: 5 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVAFHHP*CIFQCQ
Trigger: CTGACACTGAAATATGCACAAAGGATGGTGAAACGC...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTCAATGTTTCTCATCTaGGTAGCCTTTATAAGTGGC +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKSMFLI*VAFISG
Trigger: GCCACTTATAAAGGCTACCAAGATGAGAAACATTGA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTCAATGTTTCTCATCTaGGTAGCCTTTATAAGTGGC +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSSMFLI*VAFISG
Trigger: GCCACTTATAAAGGCTACCAAGATGAGAAACATTGA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp TGCTCTTTAATGTTTCAACTACCCATTCCGTTGTCTCATGAAGGCCAGTACCTCAGTAATCGCCCATCTTaGGGATTTCTTAAAAGCAGT +
Preference number: 5 (lower is better)
Translates to: CSLMFQLPIPLSHEGQYLSNRPS*GFLKSS
Trigger: ACTGCTTTTAAGAAATCCCAAAGATGGGCGATTACT...GAGGTACTGGCCTTCATGAGACAACGGAATGGGTAGTTGAAACATTAAAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTAGTAATCGCCCATCTTaGGGATTTCTTAAAAGCAGT +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSSNRPS*GFLKSS
Trigger: ACTGCTTTTAAGAAATCCCAAAGATGGGCGATTACT...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCAAGCATCCGAGAGGGTaGCAATCATTTCAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCKHPRG*QSFQPE
Trigger: CTCTGGCTGAAATGATTGCAACCCTCTCGGATGCTT...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAACATGGCCATTTATATTaGAATCCCGAAGCACACTAT +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKHGHLY*NPEAHY
Trigger: ATAGTGTGCTTCGGGATTCAAATATAAATGGCCATG...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATTACGAGAAATTTTCTaGCATTGCTTAGTCCACGAC +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKLREIF*HCLVHD
Trigger: GTCGTGGACTAAGCAATGCAAGAAAATTTCTCGTAA...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGGAACGTCTCCATTTGTaGCTGAAGTTACGAGAAATT +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKERLHL*LKLREI
Trigger: AATTTCTCGTAACTTCAGCAACAAATGGAGACGTTC...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGTCTTGCTACCAAGTTTaGTCATCTCCCCAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: VSSVNANSLTALTFSHEKSCYQV*SSPQGC
Trigger: ACAGCCTTGGGGAGATGACAAAACTTGGTAGCAAGA...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp GCAGATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAAATAATTTCCCGTAGTTaGGGATCTAGGTTTACAGTG +
Preference number: 5 (lower is better)
Translates to: ADVSFTSASSSVSYLSAKIISRS*GSRFTV
Trigger: CACTGTAAACCTAGATCCCAAACTACGGGAAATTAT...TTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACATCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp TCTTTGGGATTTCTTAAAAGCAGTTCTGCCAGTTTCCGGCTCCTTCCACGAATAATAATTTCCCGTAGTTaGGGATCTAGGTTTACAGTG +
Preference number: 5 (lower is better)
Translates to: SLGFLKSSSASFRLLPRIIISRS*GSRFTV
Trigger: CACTGTAAACCTAGATCCCAAACTACGGGAAATTAT...TATTCGTGGAAGGAGCCGGAAACTGGCAGAACTGCTTTTAAGAAATCCCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAGTCCAGCCCTTCTATTaGTTTCAGCTTCTCACATAC +
Preference number: 5 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVVQPFY*FQLLTY
Trigger: GTATGTGAGAAGCTGAAACAAATAGAAGGGCTGGAC...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTAAGAGCCTTGTGTAACTaGAACGTTGGCTTCGCTTAT +
Preference number: 5 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVRALCN*NVGFAY
Trigger: ATAAGCGAAGCCAACGTTCAAGTTACACAAGGCTCT...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS GCA 90 bp AAAAGCAGTTCTGCCAGTTTCCGGCTCCTTCCACGAATAGCAATATaGAAGGGAGTATCTCCTTTCTGTAAAATAATAGTACGAAACTTG +
Preference number: 5 (lower is better)
Translates to: KSSSASFRLLPRIAI*KGVSPFCKIIVRNL
Trigger: CAAGTTTCGTACTATTATTTTACAGAAAGGAGATACTCCCTTGCATATTGCTATTCGTGGAAGGAGCCGGAAACTGGCAGAACTGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474782.1
CDS-3UTR CAA 90 bp TCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCACACTTATTTCCAGATTGCCTaGTTCGGCAGCTATCATCAG +
Preference number: 5 (lower is better)
Translates to: SVNANSLTALTFSHEKHTYFQIA*FGSYHQ
Trigger: CTGATGATAGCTGCCGAACAAGGCAATCTGGAAATA...AGTGTGCTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp AGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTGTCATAAAGTATATCAGCATATTTTaGGAGAAGCGCTCGAACAAT +
Preference number: 5 (lower is better)
Translates to: RKVMGVDGVKIQDNSVIKYISIF*EKRSNN
Trigger: ATTGTTCGAGCGCTTCTCCAAAAATATGCTGATATA...CTTTATGACAGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GCAAAATGTAGAAAGGTGATGGGCGTGGATGGAGTCAAAATCCAGGACAATTCTTATATCAGCATATTTTaGGAGAAGCGCTCGAACAAT +
Preference number: 5 (lower is better)
Translates to: AKCRKVMGVDGVKIQDNSYISIF*EKRSNN
Trigger: ATTGTTCGAGCGCTTCTCCAAAAATATGCTGATATA...AGAATTGTCCTGGATTTTGACTCCATCCACGCCCATCACCTTTCTACATTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp AGACCACAACAAAAACCTTACCTGCCAACTGCTCCATGCTGGAAATTTATTTCGATTTCAGTGTCAGGATaGCACTGTAAGATATCTCTC +
Preference number: 5 (lower is better)
Translates to: RPQQKPYLPTAPCWKFISISVSG*HCKISL
Trigger: GAGAGATATCTTACAGTGCAATCCTGACACTGAAAT...CGAAATAAATTTCCAGCATGGAGCAGTTGGCAGGTAAGGTTTTTGTTGTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp TCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCACACTGCGTTTCACCATCCTTaGTGCATATTTCAGTGTCAG +
Preference number: 5 (lower is better)
Translates to: SVNANSLTALTFSHEKHTAFHHP*CIFQCQ
Trigger: CTGACACTGAAATATGCACAAAGGATGGTGAAACGC...AGTGTGCTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp TCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCACACTTTCAATTTGTGCAGTTaGGAGGCTGCATTATGGAGG +
Preference number: 5 (lower is better)
Translates to: SVNANSLTALTFSHEKHTFNLCS*EAALWR
Trigger: CCTCCATAATGCAGCCTCCAAACTGCACAAATTGAA...AGTGTGCTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp GAGTTAAAATACTCTTCTGATGGCTACAGTCAATATTATAAGGAGTCTCGCCTGTTCAATTTGTGCAGTTaGGAGGCTGCATTATGGAGG +
Preference number: 5 (lower is better)
Translates to: ELKYSSDGYSQYYKESRLFNLCS*EAALWR
Trigger: CCTCCATAATGCAGCCTCCAAACTGCACAAATTGAA...CAGGCGAGACTCCTTATAATATTGACTGTAGCCATCAGAAGAGTATTTTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp CTTTGGGTCAACTCTAAATATAGCCAGAAGAGTAATTCCAGATATAATGCAGCCCCTTCACTTTTCAATTaGTGCAGTTTGGAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: LWVNSKYSQKSNSRYNAAPSLFN*CSLEAA
Trigger: TGCAGCCTCCAAACTGCACAAATTGAAAAGTGAAGG...GGCTGCATTATATCTGGAATTACTCTTCTGGCTATATTTAGAGTTGACCCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACAAGCTGTCAATGGTTTTaGCCATCCTGGCCATCAATT +
Preference number: 5 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTSCQWF*PSWPSI
Trigger: AATTGATGGCCAGGATGGCAAAAACCATTGACAGCT...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATTCCCGAAGCACACTATaGAGGTTCTGGTTAATTGCC +
Preference number: 5 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNSRSTL*RFWLIA
Trigger: GGCAATTAACCAGAACCTCAATAGTGTGCTTCGGGA...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCTATTGAGGGCTGTCTaGCTACCAAGTTTTGTCATC +
Preference number: 5 (lower is better)
Translates to: VSSVNANSLTALTFSHEKLLRAV*LPSFVI
Trigger: GATGACAAAACTTGGTAGCAAGACAGCCCTCAATAG...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACAAGAACTGGGGTCCTaGAAGACAAAAACACTTCAA +
Preference number: 5 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVQELGS*KTKTLQ
Trigger: TTGAAGTGTTTTTGTCTTCAAGGACCCCAGTTCTTG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GTAATACCTTGGCGTGTAAAGGTATGGGGCAAAGAATGGCTTAAGAGAACAGTTATAATTTCCCGTAGTTaGGGATCTAGGTTTACAGTG +
Preference number: 5 (lower is better)
Translates to: VIPWRVKVWGKEWLKRTVIISRS*GSRFTV
Trigger: CACTGTAAACCTAGATCCCAAACTACGGGAAATTAT...AACTGTTCTCTTAAGCCATTCTTTGCCCCATACCTTTACACGCCAAGGTATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR CAA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTATCCAAATCTTCCAGATaGCAGTTAGCTCCATTCTTA +
Preference number: 5 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVSKSSR*QLAPFL
Trigger: TAAGAATGGAGCTAACTGCAATCTGGAAGATTTGGA...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp ATGTCTCTTTTACCTCGGCCTCATCATCGGTTAGTTATCTGTCAGCAAAATGTACATGGCCATTTATATTaGAATCCCGAAGCACACTAT +
Preference number: 5 (lower is better)
Translates to: MSLLPRPHHRLVICQQNVHGHLY*NPEAHY
Trigger: ATAGTGTGCTTCGGGATTCAAATATAAATGGCCATG...TACATTTTGCTGACAGATAACTAACCGATGATGAGGCCGAGGTAAAAGAGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000488729.5
CDS-3UTR CAA 90 bp GATCTAGGATTTGGTCTAAAAGATATCTCGAGGCTCTTTCCCAATCTATTGCTCCATGGCCATTTATATTaGAATCCCGAAGCACACTAT +
Preference number: 5 (lower is better)
Translates to: DLGFGLKDISRLFPNLLLHGHLY*NPEAHY
Trigger: ATAGTGTGCTTCGGGATTCAAATATAAATGGCCATG...GAGCAATAGATTGGGAAAGAGCCTCGAGATATCTTTTAGACCAAATCCTAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGATGGAACGTCTCCATTaGTTGCTGAAGTTACGAGAA +
Preference number: 5 (lower is better)
Translates to: VSSVNANSLTALTFSHEKMERLH*LLKLRE
Trigger: TTCTCGTAACTTCAGCAACAAATGGAGACGTTCCAT...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp CTTTGGGTCAACTCTAAATATAGCCAGAAGAGTAATTCCAGATATAATGCAGCCATGGAACGTCTCCATTaGTTGCTGAAGTTACGAGAA +
Preference number: 5 (lower is better)
Translates to: LWVNSKYSQKSNSRYNAAMERLH*LLKLRE
Trigger: TTCTCGTAACTTCAGCAACAAATGGAGACGTTCCAT...GGCTGCATTATATCTGGAATTACTCTTCTGGCTATATTTAGAGTTGACCCAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCCTATTGAGGGCTGTCTaGCTACCAAGTTTTGTCATC +
Preference number: 5 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCLLRAV*LPSFVI
Trigger: GATGACAAAACTTGGTAGCAAGACAGCCCTCAATAG...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCTCACCCCCTTATTATTaGGTGAGGAAGTCAACTGTG +
Preference number: 5 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCSPPYY*VRKSTV
Trigger: CACAGTTGACTTCCTCACCAAATAATAAGGGGGTGA...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACATCCAAATCTTCCAGATaGCAGTTAGCTCCATTCTTA +
Preference number: 5 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTSKSSR*QLAPFL
Trigger: TAAGAATGGAGCTAACTGCAATCTGGAAGATTTGGA...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp GATCTAGGATTTGGTCTAAAAGATATCTCGAGGCTCTTTCCCAATCTATTGCTCTATATCAGCATATTTTaGGAGAAGCGCTCGAACAAT +
Preference number: 5 (lower is better)
Translates to: DLGFGLKDISRLFPNLLLYISIF*EKRSNN
Trigger: ATTGTTCGAGCGCTTCTCCAAAAATATGCTGATATA...GAGCAATAGATTGGGAAAGAGCCTCGAGATATCTTTTAGACCAAATCCTAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp TGTGTACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACAATTTCAGTGTCAGGATaGCACTGTAAGATATCTCTC +
Preference number: 5 (lower is better)
Translates to: CVLNIKKAGKQHVLQHRTISVSG*HCKISL
Trigger: GAGAGATATCTTACAGTGCAATCCTGACACTGAAAT...TGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp TCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCACACTTCAATGTTTCTCATCTaGGTAGCCTTTATAAGTGGC +
Preference number: 5 (lower is better)
Translates to: SVNANSLTALTFSHEKHTSMFLI*VAFISG
Trigger: GCCACTTATAAAGGCTACCAAGATGAGAAACATTGA...AGTGTGCTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCATGGCCATTTATATTaGAATCCCGAAGCACACTAT +
Preference number: 5 (lower is better)
Translates to: VSSVNANSLTALTFSHEKHGHLY*NPEAHY
Trigger: ATAGTGTGCTTCGGGATTCAAATATAAATGGCCATG...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp TCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGCACACTTTACGAGAAATTTTCTaGCATTGCTTAGTCCACGAC +
Preference number: 5 (lower is better)
Translates to: SVNANSLTALTFSHEKHTLREIF*HCLVHD
Trigger: GTCGTGGACTAAGCAATGCAAGAAAATTTCTCGTAA...AGTGTGCTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp GTCAGTTCAGTAAATGCCAACAGTCTTACAGCTTTAACCTTTAGTCATGAGAAGGAACGTCTCCATTTGTaGCTGAAGTTACGAGAAATT +
Preference number: 5 (lower is better)
Translates to: VSSVNANSLTALTFSHEKERLHL*LKLREI
Trigger: AATTTCTCGTAACTTCAGCAACAAATGGAGACGTTC...CTTCTCATGACTAAAGGTTAAAGCTGTAAGACTGTTGGCATTTACTGAACTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGAGTAGCTGTGTGACTTaGGGCAATTCCTTAGCATCT +
Preference number: 5 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKSSCVT*GNSLAS
Trigger: AGATGCTAAGGAATTGCCCAAAGTCACACAGCTACT...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATTACTTATCAGAGCAGTaGACTTTAGCACCATTTTGC +
Preference number: 5 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNYLSEQ*TLAPFC
Trigger: GCAAAATGGTGCTAAAGTCAACTGCTCTGATAAGTA...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp GAGTTAAAATACTCTTCTGATGGCTACAGTCAATATTATAAGGAGTCTCGCCTGTATATCAGCATATTTTaGGAGAAGCGCTCGAACAAT +
Preference number: 5 (lower is better)
Translates to: ELKYSSDGYSQYYKESRLYISIF*EKRSNN
Trigger: ATTGTTCGAGCGCTTCTCCAAAAATATGCTGATATA...CAGGCGAGACTCCTTATAATATTGACTGTAGCCATCAGAAGAGTATTTTAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488729.5
CDS-3UTR CAA 90 bp GATGAATTTATTCAACACTATGTACAAAGTTTAAGGCCGTGGTCTAATCCATGCAGTAATCGCCCATCTTaGGGATTTCTTAAAAGCAGT +
Preference number: 5 (lower is better)
Translates to: DEFIQHYVQSLRPWSNPCSNRPS*GFLKSS
Trigger: ACTGCTTTTAAGAAATCCCAAAGATGGGCGATTACT...GCATGGATTAGACCACGGCCTTAAACTTTGTACATAGTGTTGAATAAATTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp ATTTTTAGTCTACACCATCTAGCTTATGTGTCTTTTTGTAGTCTCAAGGGTGATCAAGAACTGGGGTCCTaGAAGACAAAAACACTTCAA +
Preference number: 5 (lower is better)
Translates to: IFSLHHLAYVSFCSLKGDQELGS*KTKTLQ
Trigger: TTGAAGTGTTTTTGTCTTCAAGGACCCCAGTTCTTG...ATCACCCTTGAGACTACAAAAAGACACATAAGCTAGATGGTGTAGACTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000459813.1
CDS-3UTR CAA 90 bp AATTCTAGAAAAGCTGTGAAACTTCACCTTTCCCCTATTCTTAACCTTACTTGCAATTTGGGGGTTCAGTaGAATATAAATCATCCCGAG +
Preference number: 5 (lower is better)
Translates to: NSRKAVKLHLSPILNLTCNLGVQ*NINHPE
Trigger: CTCGGGATGATTTATATTCAACTGAACCCCCAAATT...GCAAGTAAGGTTAAGAATAGGGGAAAGGTGAAGTTTCACAGCTTTTCTAGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp TACTTAACATTAAGAAAGCAGGGAAGCAGCATGTCCTACAACATAGAACACAATTATATCAGCATATTTTaGGAGAAGCGCTCGAACAAT +
Preference number: 5 (lower is better)
Translates to: YLTLRKQGSSMSYNIEHNYISIF*EKRSNN
Trigger: ATTGTTCGAGCGCTTCTCCAAAAATATGCTGATATA...ATTGTGTTCTATGTTGTAGGACATGCTGCTTCCCTGCTTTCTTAATGTTAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319688.5
CDS-3UTR CAA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGGAACGTCTCCATTTGTaGCTGAAGTTACGAGAAATT +
Preference number: 5 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKERLHL*LKLREI
Trigger: AATTTCTCGTAACTTCAGCAACAAATGGAGACGTTC...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS-3UTR CAA 90 bp ACTGCACACAAAGTAAACTTAAGAGATGTCAACAACTCATCTGTTTGTTACAAGAGCATGCTATTGTGGTaGAAAGATTTCCAAAAGCAC +
Preference number: 5 (lower is better)
Translates to: TAHKVNLRDVNNSSVCYKSMLLW*KDFQKH
Trigger: GTGCTTTTGGAAATCTTTCAACCACAATAGCATGCT...CTTGTAACAAACAGATGAGTTGTTGACATCTCTTAAGTTTACTTTGTGTGCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS GCA 72 bp CTGGTCCTCAGCTCCGGCGGAACGGGCCCGCTCGGCTaGAGGCGATGTCAGAGGACGGGGAAGCAAGAGACG +
Preference number: 6 (lower is better)
Translates to: LVLSSGGTGPLG*RRCQRTGKQET
Trigger: CGTCTCTTGCTTCCCCGTCCTCTGACATCGCCTGCAGCCGAGCGGGCCCGTTCCGCCGGAGCTGAGGACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256707.8
ENST00000319688.5
ENST00000473731.5
ENST00000488729.5
ENST00000489024.5
ENST00000496725.1
ENST00000569008.2
CDS GCA 72 bp GCGATGTCAGAGGACGGGGAAGCAAGAGACGGCGACTaGAAGCGCGTCGCCCTCACCACACCCGGCGGCCAT +
Preference number: 6 (lower is better)
Translates to: AMSEDGEARDGD*KRVALTTPGGH
Trigger: ATGGCCGCCGGGTGTGGTGAGGGCGACGCGCTTGCAGTCGCCGTCTCTTGCTTCCCCGTCCTCTGACATCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256707.8
ENST00000319688.5
ENST00000473731.5
ENST00000488729.5
ENST00000489024.5
ENST00000496725.1
ENST00000569008.2
CDS TCA 72 bp CCAGTGTCGGCGTGCGCCTGCCAACTTAGATTACTGTaGCGAGGGGCACCTTCATCCAGGCCAAGCGTGTTC +
Preference number: 6 (lower is better)
Translates to: PVSACACQLRLL*RGAPSSRPSVF
Trigger: GAACACGCTTGGCCTGGATGAAGGTGCCCCTCGTCACAGTAATCTAAGTTGGCAGGCGCACGCCGACACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569008.2
CDS TCA 72 bp GGGCCTGGGGCTGGGCCTGACCCTAGGCCATTGTTCTaGTCTCTGGGCAAACTCGTTTTTACTGATGGACGT +
Preference number: 6 (lower is better)
Translates to: GPGAGPDPRPLF*SLGKLVFTDGR
Trigger: ACGTCCATCAGTAAAAACGAGTTTGCCCAGAGATCAGAACAATGGCCTAGGGTCAGGCCCAGCCCCAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473731.5
CDS CCA 72 bp CTGCAATTAACTTTATTTGAATACGGTCTCCCAACCTaGTCCTCAGCTCCGGCGGAACGGGCCCGCTCGGCT +
Preference number: 6 (lower is better)
Translates to: LQLTLFEYGLPT*SSAPAERARSA
Trigger: AGCCGAGCGGGCCCGTTCCGCCGGAGCTGAGGACCAGGTTGGGAGACCGTATTCAAATAAAGTTAATTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473731.5
ENST00000569008.2
CDS TCA 72 bp AAACCCAGAGTCACACAGCCTCGAGGAGTCTGTGGGTaGAGAAAGCCCCTCAGCAGCATCCTCCTTGATAAC +
Preference number: 6 (lower is better)
Translates to: KPRVTQPRGVCG*RKPLSSILLDN
Trigger: GTTATCAAGGAGGATGCTGCTGAGGGGCTTTCTTCACCCACAGACTCCTCGAGGCTGTGTGACTCTGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638224.1
CDS CCA 72 bp GGAGCCGCCAGGGTAATACCTTGGCGTGTAAAGGTATaGGGCAAAGAATGGCCTGTTGTAGAAGGGATGCTG +
Preference number: 6 (lower is better)
Translates to: GAARVIPWRVKV*GKEWPVVEGML
Trigger: CAGCATCCCTTCTACAACAGGCCATTCTTTGCCCCATACCTTTACACGCCAAGGTATTACCCTGGCGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256707.8
ENST00000473731.5
ENST00000638224.1
CDS TCA 72 bp AGGCCAGCATTTTCTTCCTGCCAACTTAGATTACTGTaGCGAGGGGCACCTTCATCCAGGCCAAGCGTGTTC +
Preference number: 6 (lower is better)
Translates to: RPAFSSCQLRLL*RGAPSSRPSVF
Trigger: GAACACGCTTGGCCTGGATGAAGGTGCCCCTCGTCACAGTAATCTAAGTTGGCAGGAAGAAAATGCTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496383.5
CDS TCA 72 bp CTGTACTGCAGACCAGTGACACTTGGATTGGCACCATaGGAAAGAAGCAACTCTACTACGTCAGTACGGCCT +
Preference number: 6 (lower is better)
Translates to: LYCRPVTLGLAP*ERSNSTTSVRP
Trigger: AGGCCGTACTGACGTAGTAGAGTTGCTTCTTTCTCATGGTGCCAATCCAAGTGTCACTGGTCTGCAGTACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319688.5
ENST00000489024.5
CDS CCA 72 bp TATATCTGCATGGCCTCTCCCTGCTGCCCAAATGATTaGGTAAACACTGTACTGCAGACCAGTGACACTTGG +
Preference number: 6 (lower is better)
Translates to: YICMASPCCPND*VNTVLQTSDTW
Trigger: CCAAGTGTCACTGGTCTGCAGTACAGTGTTTACCCAATCATTTGGGCAGCAGGGAGAGGCCATGCAGATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319688.5
ENST00000489024.5
CDS TCA 72 bp GCAGCATCCTCCTTGATAACTTCTAGGCCATTGTTCTaGTCTCTGGGCAAACTCGTTTTTACTGATGGACGT +
Preference number: 6 (lower is better)
Translates to: AASSLITSRPLF*SLGKLVFTDGR
Trigger: ACGTCCATCAGTAAAAACGAGTTTGCCCAGAGATCAGAACAATGGCCTAGAAGTTATCAAGGAGGATGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256707.8
ENST00000638224.1
CDS CCA 72 bp TATTTCCAGATTGCCTTGTTCGGCAGCTATCATCAGTaGAGTCTGGCCACACTCATTTCTCTCATCTACATC +
Preference number: 6 (lower is better)
Translates to: YFQIALFGSYHQ*SLATLISLIYI
Trigger: GATGTAGATGAGAGAAATGAGTGTGGCCAGACTCCACTGATGATAGCTGCCGAACAAGGCAATCTGGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256707.8
ENST00000319688.5
ENST00000473731.5
ENST00000489024.5
ENST00000569008.2
CDS GCA 72 bp TCTGCCAGTTTCCGGCTCCTTCCACGAATAGCAATATaGAAGGGAGTATCTCCTTTCTGTAAAATAATAGTA +
Preference number: 6 (lower is better)
Translates to: SASFRLLPRIAI*KGVSPFCKIIV
Trigger: TACTATTATTTTACAGAAAGGAGATACTCCCTTGCATATTGCTATTCGTGGAAGGAGCCGGAAACTGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474782.1
CDS CAA 90 bp TGTAATCACACATACCTGTCCTCTAATGTCTATATCAGCATATTTTaGGAGAAGCGCTCGAACAATTTCAACATGACCACCTCTGACAGC +
Preference number: 6 (lower is better)
Translates to: CNHTYLSSNVYISIF*EKRSNNFNMTTSDS
Trigger: GCTGTCAGAGGTGGTCATGTTGAAATTGTTCGAGCGCTTCTCCAAAAATATGCTGATATAGACATTAGAGGACAGGTATGTGTGATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471275.1