RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIAA2026 (Homo sapiens)

Ensembl gene IDs: ENSG00000183354

Ensembl transcript IDs: ENST00000381461.6, ENST00000399933.8, ENST00000436015.6, ENST00000513355.2, ENST00000540714.1

Found 713 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCACAGGGCATTTTGTATACCATTTGTAAAGGACCTTTTGTATTaGTGTGGCAGGTCAATGCTGGCTTTATCGGGCTTGCTTCCGGAG +
Preference number: 1 (lower is better)
Translates to: GHRAFCIPFVKDLLY*CGRSMLALSGLLPE
Trigger: CTCCGGAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCACACCAATACAAAAGGTCCTTTACAAATGGTATACAAAATGCCCTGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 90 bp GACTTCAAGGGAGAAGAGGGCATGTGTGAAGTTTTATCTATCACGTaGCCCAAATCACCACTGCCAGTGGTGTGGCCTAATGTAAGTTTG +
Preference number: 1 (lower is better)
Translates to: DFKGEEGMCEVLSIT*PKSPLPVVWPNVSL
Trigger: CAAACTTACATTAGGCCACACCACTGGCAGTGGTGATTTGGGCCACGTGATAGATAAAACTTCACACATGCCCTCTTCTCCCTTGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 90 bp CAGGGCATTTTGTATACCATTTGTAAAGGACCTTTTGTATTGGTGTaGCAGGTCAATGCTGGCTTTATCGGGCTTGCTTCCGGAGGAGAT +
Preference number: 1 (lower is better)
Translates to: QGILYTICKGPFVLV*QVNAGFIGLASGGD
Trigger: ATCTCCTCCGGAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCACACCAATACAAAAGGTCCTTTACAAATGGTATACAAAATGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR TCA 90 bp AGTACTAGAACAAATAGAGGACTTCAAGGGAGAAGAGGGCATGTGTaGAGTTTTATCTATCACGTGGCCCAAATCACCACTGCCAGTGGT +
Preference number: 1 (lower is better)
Translates to: STRTNRGLQGRRGHV*SFIYHVAQITTASG
Trigger: ACCACTGGCAGTGGTGATTTGGGCCACGTGATAGATAAAACTTCACACATGCCCTCTTCTCCCTTGAAGTCCTCTATTTGTTCTAGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 90 bp TGGTGTGCCCACTGTAGACGGAATCAGTACTATTTGGGGTTGCTCTaGAGTCTTAACATATGCTTTATGCAATGGAGGAGGAAGAGTTTG +
Preference number: 1 (lower is better)
Translates to: WCAHCRRNQYYLGLL*SLNICFMQWRRKSL
Trigger: CAAACTCTTCCTCCTCCATTGCATAAAGCATATGTTAAGACTCCAGAGCAACCCCAAATAGTACTGATTCCGTCTACAGTGGGCACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 90 bp AGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGAATGTaGAACTGTGTTTATTATTTTAGGGGATGTAGTCGCAGGTGTAGG +
Preference number: 1 (lower is better)
Translates to: RNRYRTCGSWYCCRM*NCVYYFRGCSRRCR
Trigger: CCTACACCTGCGACTACATCCCCTAAAATAATAAACACAGTTCCACATTCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 90 bp AGTAGATATAAGGAGAACATGGCTGCCAGCTCCAAGACCTTGTGGTaGAACAATAAACCGGGTTCCGTTAATCATAATCTGAGTACCAGG +
Preference number: 1 (lower is better)
Translates to: SRYKENMAASSKTLW*NNKPGSVNHNLSTR
Trigger: CCTGGTACTCAGATTATGATTAACGGAACCCGGTTTATTGTTCCACCACAAGGTCTTGGAGCTGGCAGCCATGTTCTCCTTATATCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 90 bp ACTAAGGGGGCTCCATATTTTGGATTAGTAGATATAAGGAGAACATaGCTGCCAGCTCCAAGACCTTGTGGTGGAACAATAAACCGGGTT +
Preference number: 1 (lower is better)
Translates to: TKGAPYFGLVDIRRT*LPAPRPCGGTINRV
Trigger: AACCCGGTTTATTGTTCCACCACAAGGTCTTGGAGCTGGCAGCCATGTTCTCCTTATATCTACTAATCCAAAATATGGAGCCCCCTTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR TCA 90 bp AAATGCAGCTCATATGAAAATATCAGCTGTGTAACATCAGAAGCATaGCGCCTACAGGAAGATGGCCTCGAGAAAGTCTTGGAAAGAAGC +
Preference number: 1 (lower is better)
Translates to: KCSSYENISCVTSEA*RLQEDGLEKVLERS
Trigger: GCTTCTTTCCAAGACTTTCTCGAGGCCATCTTCCTGTAGGCGTCATGCTTCTGATGTTACACAGCTGATATTTTCATATGAGCTGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436015.6
3UTR TCA 90 bp GATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTAGATTaGATGCCTTGGCCACTGTTAAGAACTAAGGGGGCTCCATATTTT +
Preference number: 1 (lower is better)
Translates to: DASVIFWAELSIGVD*MPWPLLRTKGAPYF
Trigger: AAAATATGGAGCCCCCTTAGTTCTTAACAGTGGCCAAGGCATTCAATCTACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR GCA 90 bp TTTATTGGTGTGCCCACTGTAGACGGAATCAGTACTATTTGGGGTTaGTCTGGAGTCTTAACATATGCTTTATGCAATGGAGGAGGAAGA +
Preference number: 1 (lower is better)
Translates to: FIGVPTVDGISTIWG*SGVLTYALCNGGGR
Trigger: TCTTCCTCCTCCATTGCATAAAGCATATGTTAAGACTCCAGAGCAACCCCAAATAGTACTGATTCCGTCTACAGTGGGCACACCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 90 bp ATTAGTAGATATAAGGAGAACATGGCTGCCAGCTCCAAGACCTTGTaGTGGAACAATAAACCGGGTTCCGTTAATCATAATCTGAGTACC +
Preference number: 1 (lower is better)
Translates to: ISRYKENMAASSKTL*WNNKPGSVNHNLST
Trigger: GGTACTCAGATTATGATTAACGGAACCCGGTTTATTGTTCCACCACAAGGTCTTGGAGCTGGCAGCCATGTTCTCCTTATATCTACTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 90 bp AATGTGGCTGCTGAAACTGCATTCTTGGCTTTTCCTGCCTCACTCTaGCTAGTCTTAACTGATGGTGTTAATAAGTTACTTACAGAGGTT +
Preference number: 1 (lower is better)
Translates to: NVAAETAFLAFPASL*LVLTDGVNKLLTEV
Trigger: AACCTCTGTAAGTAACTTATTAACACCATCAGTTAAGACTAGCCAGAGTGAGGCAGGAAAAGCCAAGAATGCAGTTTCAGCAGCCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR TCA 90 bp GTTGTCTGTGGGAAAGATGAACAATGTTGTTCTGTACCTTTCTGTTaGAGTGGTGGCACTTCTTTTGCAACTGCTTTTCCTTCTTTATGC +
Preference number: 1 (lower is better)
Translates to: VVCGKDEQCCSVPFC*SGGTSFATAFPSLC
Trigger: GCATAAAGAAGGAAAAGCAGTTGCAAAAGAAGTGCCACCACTTCAACAGAAAGGTACAGAACAACATTGTTCATCTTTCCCACAGACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR TCA 90 bp AGACCTTGTGGTGGAACAATAAACCGGGTTCCGTTAATCATAATCTaGGTACCAGGTGCCAAAGGTGTACTGGTATTGATGACTATTTTT +
Preference number: 1 (lower is better)
Translates to: RPCGGTINRVPLIII*VPGAKGVLVLMTIF
Trigger: AAAAATAGTCATCAATACCAGTACACCTTTGGCACCTGGTACTCAGATTATGATTAACGGAACCCGGTTTATTGTTCCACCACAAGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR TCA 90 bp ACTTCGACTGGCAGATACAACAATCTGAGAGAGAGATGGAGAGAGTaGAGAAACCTTAGATGCTGGAGTATTTATGGTATTCAAAATGGC +
Preference number: 1 (lower is better)
Translates to: TSTGRYNNLRERWRE*RNLRCWSIYGIQNG
Trigger: GCCATTTTGAATACCATAAATACTCCAGCATCTAAGGTTTCTTCACTCTCTCCATCTCTCTCTCAGATTGTTGTATCTGCCAGTCGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR TCA 90 bp CATATTAATTGCAGTTCCATTGCCAGAAGAAAGAATAGATGGAGCTaGTACCAGCATAAGTTTCTGAACTGGAGTCCCACTGATTACATC +
Preference number: 1 (lower is better)
Translates to: HINCSSIARRKNRWS*YQHKFLNWSPTDYI
Trigger: GATGTAATCAGTGGGACTCCAGTTCAGAAACTTATGCTGGTATCAGCTCCATCTATTCTTTCTTCTGGCAATGGAACTGCAATTAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 90 bp GAGGAGATAAAACTGGTTTTTCCACAGCAAGAGCATTTCTACCTGTaGAAGGAGGCAGTTGATTTGTTAAGGTCACTTTATTCCCAATAT +
Preference number: 1 (lower is better)
Translates to: EEIKLVFPQQEHFYL*KEAVDLLRSLYSQY
Trigger: ATATTGGGAATAAAGTGACCTTAACAAATCAACTGCCTCCTTCCACAGGTAGAAATGCTCTTGCTGTGGAAAAACCAGTTTTATCTCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 90 bp TTTATTTTTATTGGTGTGCCCACTGTAGACGGAATCAGTACTATTTaGGGTTGCTCTGGAGTCTTAACATATGCTTTATGCAATGGAGGA +
Preference number: 1 (lower is better)
Translates to: FIFIGVPTVDGISTI*GCSGVLTYALCNGG
Trigger: TCCTCCATTGCATAAAGCATATGTTAAGACTCCAGAGCAACCCCAAATAGTACTGATTCCGTCTACAGTGGGCACACCAATAAAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR GCA 90 bp GGAAATGATGGCTCTGTATGCTTTGATTCACTGAAACAGTCAATCTaGACATCACTTTCTAGATTCTCAACTGTTGTCTCATTTGTGCTT +
Preference number: 1 (lower is better)
Translates to: GNDGSVCFDSLKQSI*TSLSRFSTVVSFVL
Trigger: AAGCACAAATGAGACAACAGTTGAGAATCTAGAAAGTGATGTGCAGATTGACTGTTTCAGTGAATCAAAGCATACAGAGCCATCATTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR TCA 90 bp GCTCTTGCTGAAGAAACCACTGATTCATTAACAGGGGTAATATTCTaGCTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTT +
Preference number: 1 (lower is better)
Translates to: ALAEETTDSLTGVIF*LTKFELTGTELPLV
Trigger: AACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTCAGAATATTACCCCTGTTAATGAATCAGTGGTTTCTTCAGCAAGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp GCTACTTGGCAGTGGAGGATTACTGGGGCAAATGGCAGAAACCAAAGATGTCTTGGTGCCGAAGCCGTGTaGATGGTAGTGCCACCTGGA +
Preference number: 2 (lower is better)
Translates to: ATWQWRITGANGRNQRCLGAEAV*MVVPPG
Trigger: TCCAGGTGGCACTACCATTCACACGGCTTCGGCACC...AAGACATCTTTGGTTTCTGCCATTTGCCCCAGTAATCCTCCACTGCCAAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CAA 90 bp GGTGAAGCACTGGGCAAGGAGAATGTGGCTGCTGAAACTGCATTCTaGGCTTTTCCTGCCTCACTCTGGCTAGTCTTAACTGATGGTGTT +
Preference number: 2 (lower is better)
Translates to: GEALGKENVAAETAF*AFPASLWLVLTDGV
Trigger: AACACCATCAGTTAAGACTAGCCAGAGTGAGGCAGGAAAAGCCAAGAATGCAGTTTCAGCAGCCACATTCTCCTTGCCCAGTGCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp AGCCGTGTGAATGGTAGTGCCACCTGGAGCAGAACTGTAACTGGGGGTTTTTACTGCTGCTGTTGCTTCTaGCCTTGTAACAGGGTAACT +
Preference number: 2 (lower is better)
Translates to: SRVNGSATWSRTVTGGFYCCCCF*PCNRVT
Trigger: AGTTACCCTGTTACAAGGTCAGAAGCAACAGCAGCA...GTAAAAACCCCCAGTTACAGTTCTGCTCCAGGTGGCACTACCATTCACACGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR GCA 90 bp AGCCGTGTGAATGGTAGTGCCACCTGGAGCAGAACTGTAACTGGGGGTTTTTACTTTTGGCACCAGAAATaGCTGCAGCTGAGGAGCAAA +
Preference number: 2 (lower is better)
Translates to: SRVNGSATWSRTVTGGFYFWHQK*LQLRSK
Trigger: TTTGCTCCTCAGCTGCAGGCATTTCTGGTGCCAAAA...GTAAAAACCCCCAGTTACAGTTCTGCTCCAGGTGGCACTACCATTCACACGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp TGGTGTGGCAGGTCAATGCTGGCTTTATCGGGCTTGCTTCCGGAGGAGATAAAAGGTTTGGTCCCTTTCTaGAGAGTAGACACTGGTACT +
Preference number: 2 (lower is better)
Translates to: WCGRSMLALSGLLPEEIKGLVPF*RVDTGT
Trigger: AGTACCAGTGTCTACTCTCCAGAAAGGGACCAAACC...TTTTATCTCCTCCGGAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CAA 90 bp TGGCCACAGGGCATTTTGTATACCATTTGTAAAGGACCTTTTGTATaGGTGTGGCAGGTCAATGCTGGCTTTATCGGGCTTGCTTCCGGA +
Preference number: 2 (lower is better)
Translates to: WPQGILYTICKGPFV*VWQVNAGFIGLASG
Trigger: TCCGGAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCACACCAATACAAAAGGTCCTTTACAAATGGTATACAAAATGCCCTGTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp AAGATGCAGCTCTGTCAGGCTTCTCTAAGCCCGACGACTGAAAAGCAGGGAAGAAGAGGAAGAAGTTGTTaGTTTTGGCACCAGAAATGC +
Preference number: 2 (lower is better)
Translates to: KMQLCQASLSPTTEKQGRRGRSC*FWHQKC
Trigger: GCATTTCTGGTGCCAAAATCAACAACTTCTTCCTCT...TCTTCCCTGCTTTTCAGTCGTCGGGCTTAGAGAAGCCTGACAGAGCTGCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp TTCTTGTCAGCAAACCTTCATCAAGTCTTCAGAGCGATACTGAGGGTGCTCTCAACGCCTACAGGAAGATaGCCTCGAGAAAGTCTTGGA +
Preference number: 2 (lower is better)
Translates to: FLSANLHQVFRAILRVLSTPTGR*PRESLG
Trigger: TCCAAGACTTTCTCGAGGCCATCTTCCTGTAGGCGT...TGAGAGCACCCTCAGTATCGCTCTGAAGACTTGATGAAGGTTTGCTGACAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436015.6
3UTR-3UTR CCA 90 bp AAGATGCAGCTCTGTCAGGCTTCTCTAAGCCCGACGACTGAAAAGCAGGGAAGAGCTAGTGTGATCTTCTaGGCAGAGTTATCTATTGGT +
Preference number: 2 (lower is better)
Translates to: KMQLCQASLSPTTEKQGRASVIF*AELSIG
Trigger: ACCAATAGATAACTCTGCCCAGAAGATCACACTAGC...TCTTCCCTGCTTTTCAGTCGTCGGGCTTAGAGAAGCCTGACAGAGCTGCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CAA 90 bp ACCACTGGCCACAGGGCATTTTGTATACCATTTGTAAAGGACCTTTaGTATTGGTGTGGCAGGTCAATGCTGGCTTTATCGGGCTTGCTT +
Preference number: 2 (lower is better)
Translates to: TTGHRAFCIPFVKDL*YWCGRSMLALSGLL
Trigger: AAGCAAGCCCGATAAAGCCAGCATTGACCTGCCACACCAATACAAAAGGTCCTTTACAAATGGTATACAAAATGCCCTGTGGCCAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp CATAAGTTTCTGAACTGGAGTCCCACTGATTACATCTCCATTTGTTGCTGCTGTGTTGATGACAGAGGCTaGCCTGTGGAGGAAATGGTC +
Preference number: 2 (lower is better)
Translates to: HKFLNWSPTDYISICCCCVDDRG*PVEEMV
Trigger: GACCATTTCCTCCACAGGTCAGCCTCTGTCATCAAC...ACAGCAGCAACAAATGGAGATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp AAGATGCAGCTCTGTCAGGCTTCTCTAAGCCCGACGACTGAAAAGCAGGGAAGAGGCAGAGTTATCTATTaGTGTAGATTGAATGCCTTG +
Preference number: 2 (lower is better)
Translates to: KMQLCQASLSPTTEKQGRGRVIY*CRLNAL
Trigger: CAAGGCATTCAATCTACACCAATAGATAACTCTGCC...TCTTCCCTGCTTTTCAGTCGTCGGGCTTAGAGAAGCCTGACAGAGCTGCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR GCA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCAGGCCCAAATCACCACTaGCAGTGGTGTGGCCTAATG +
Preference number: 2 (lower is better)
Translates to: DSQNLSLLELNYHLLTMAGPNHH*QWCGLM
Trigger: CATTAGGCCACACCACTGGCAGTGGTGATTTGGGCC...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp TTTCTTGTCAGCAAACCTTCATCAAGTCTTCAGAGCGATACTGAGGGTGCTCTCGCCTCGAGAAAGTCTTaGAAAGAAGCACTTTCTGCT +
Preference number: 2 (lower is better)
Translates to: FLVSKPSSSLQSDTEGALASRKS*KEALSA
Trigger: AGCAGAAAGTGCTTCTTTCCAAGACTTTCTCGAGGC...GAGAGCACCCTCAGTATCGCTCTGAAGACTTGATGAAGGTTTGCTGACAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436015.6
3UTR-3UTR TCA 90 bp TGTGGAACTGTGTTTATTATTTTAGGGGATGTAGTCGCAGGTGTAGGTAAGGCATTTGCAAGCAAAGCCTaGATGGGTTTGGTCCCTTTC +
Preference number: 2 (lower is better)
Translates to: CGTVFIILGDVVAGVGKAFASKA*MGLVPF
Trigger: GAAAGGGACCAAACCCATTCAGGCTTTGCTTGCAAA...TGCCTTACCTACACCTGCGACTACATCCCCTAAAATAATAAACACAGTTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR GCA 90 bp TTCTTAGAGGATGTTGTAGAGGTTGGCCACTTAAGGAATTATTTGATGCTAGTGGGCTCCTGGTACTGCTaGCGAATGTGGAACTGTGTT +
Preference number: 2 (lower is better)
Translates to: FLEDVVEVGHLRNYLMLVGSWYC*RMWNCV
Trigger: AACACAGTTCCACATTCGGCAGCAGTACCAGGAGCC...CACTAGCATCAAATAATTCCTTAAGTGGCCAACCTCTACAACATCCTCTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGAAGGACCTTTTGTATTaGTGTGGCAGGTCAATGCTG +
Preference number: 2 (lower is better)
Translates to: AETPVDVSAGVILIAVPLKDLLY*CGRSML
Trigger: CAGCATTGACCTGCCACACCAATACAAAAGGTCCTT...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp AAGGAATTATTTGATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTATGGTCGGTGAAGCACTaGGCAAGGAGAATGTGGCTG +
Preference number: 2 (lower is better)
Translates to: KELFDASVIFWAELSIGVWSVKH*ARRMWL
Trigger: CAGCCACATTCTCCTTGCCCAGTGCTTCACCGACCA...TACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATCAAATAATTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CAA 90 bp TTTAGGATCCACCATAGGCTGCACCTGAATCTTTACAGAGCTATTTaGAAGATCTATTGGCAACCACTGGCCACAGGGCATTTTGTATAC +
Preference number: 2 (lower is better)
Translates to: FRIHHRLHLNLYRAI*KIYWQPLATGHFVY
Trigger: GTATACAAAATGCCCTGTGGCCAGTGGTTGCCAATAGATCTTCAAAATAGCTCTGTAAAGATTCAGGTGCAGCCTATGGTGGATCCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CAA 90 bp TTTTATTGGTGTGCCCACTGTAGACGGAATCAGTACTATTTGGGGTaGCTCTGGAGTCTTAACATATGCTTTATGCAATGGAGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: FYWCAHCRRNQYYLG*LWSLNICFMQWRRK
Trigger: CTTCCTCCTCCATTGCATAAAGCATATGTTAAGACTCCAGAGCAACCCCAAATAGTACTGATTCCGTCTACAGTGGGCACACCAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CAA 90 bp TGGATTAGTAGATATAAGGAGAACATGGCTGCCAGCTCCAAGACCTaGTGGTGGAACAATAAACCGGGTTCCGTTAATCATAATCTGAGT +
Preference number: 2 (lower is better)
Translates to: WISRYKENMAASSKT*WWNNKPGSVNHNLS
Trigger: ACTCAGATTATGATTAACGGAACCCGGTTTATTGTTCCACCACAAGGTCTTGGAGCTGGCAGCCATGTTCTCCTTATATCTACTAATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp GCTACTTGGCAGTGGAGGATTACTGGGGCAAATGGCAGAAACCAAAGATGTCTTTTTACAGAGCTATTTTaGAGATCTATTGGCAACCAC +
Preference number: 2 (lower is better)
Translates to: ATWQWRITGANGRNQRCLFTELF*RSIGNH
Trigger: GTGGTTGCCAATAGATCTTCAAAATAGCTCTGTAAA...AAGACATCTTTGGTTTCTGCCATTTGCCCCAGTAATCCTCCACTGCCAAGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp GTTTGGCTAAAAGGTGAAAGACTAGATGTAGTAGTTGTTCCAGCTACAGGTGAAGGAGAATGTGGCTGCTaGAACTGCATTCTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: VWLKGERLDVVVVPATGEGECGC*NCILGF
Trigger: AAAGCCAAGAATGCAGTTTCAGCAGCCACATTCTCC...TTCACCTGTAGCTGGAACAACTACTACATCTAGTCTTTCACCTTTTAGCCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGGTATTGGGTGAATTTTaGTCTGGGTTGGTCTGTACT +
Preference number: 2 (lower is better)
Translates to: AETPVDVSAGVILIAVPLVLGEF*SGLVCT
Trigger: AGTACAGACCAACCCAGATCAAAATTCACCCAATAC...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp TGTGGAACTGTGTTTATTATTTTAGGGGATGTAGTCGCAGGTGTAGGTAAGGCAGAACTGGAGTCCCACTaGTTACATCTCCATTTGTTG +
Preference number: 2 (lower is better)
Translates to: CGTVFIILGDVVAGVGKAELESH*LHLHLL
Trigger: CAACAAATGGAGATGTAATCAGTGGGACTCCAGTTC...TGCCTTACCTACACCTGCGACTACATCCCCTAAAATAATAAACACAGTTCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp TTAGGAGACACTACTGGTTGTGTAGTTGAAATCAGAACAGATGATGCAAGGTGTAACAAGAGTTGGGGTTaGTGTACCACTAGGAACTGG +
Preference number: 2 (lower is better)
Translates to: LGDTTGCVVEIRTDDARCNKSWG*CTTRNW
Trigger: CCAGTTCCTAGTGGTACATCAACCCCAACTCTTGTT...ACACCTTGCATCATCTGTTCTGATTTCAACTACACAACCAGTAGTGTCTCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp AGATTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGATTCACATCCTTTATCTaGGACACAGCTGGTGATGAA +
Preference number: 2 (lower is better)
Translates to: RLSFRNRYRTCGSWYCCRFTSFI*DTAGDE
Trigger: TTCATCACCAGCTGTGTCTCAGATAAAGGATGTGAA...TCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp AGATTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGAATTTGCTCCGGTAACTaGAAGCACATTTACTGCTCT +
Preference number: 2 (lower is better)
Translates to: RLSFRNRYRTCGSWYCCRICSGN*KHIYCS
Trigger: AGAGCAGTAAATGTGCTTTCAGTTACCGGAGCAAAT...TCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp GGTGTTAATAAGTTACTTACAGAGGTTACAGGCGACAAAGGCTGTGGTCTAGCACTTTGCCTTCTTCCTTaGAGAAAGCTCTTTTGTGCT +
Preference number: 2 (lower is better)
Translates to: GVNKLLTEVTGDKGCGLALCLLP*RKLFCA
Trigger: AGCACAAAAGAGCTTTCTCCAAGGAAGAAGGCAAAG...TGCTAGACCACAGCCTTTGTCGCCTGTAACCTCTGTAAGTAACTTATTAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp AAGGAATTATTTGATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTAGTGGCAGGTCAATGCTaGCTTTATCGGGCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: KELFDASVIFWAELSIGVVAGQC*LYRACF
Trigger: GAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCAC...TACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATCAAATAATTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp AGATTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGATTTCTGTTGAAGTGGTaGCACTTCTTTTGCAACTGC +
Preference number: 2 (lower is better)
Translates to: RLSFRNRYRTCGSWYCCRFLLKW*HFFCNC
Trigger: GCAGTTGCAAAAGAAGTGCCACCACTTCAACAGAAA...TCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGGCTGTATTTGGTAGTTaGGTAGAAACAGTTCCTGGT +
Preference number: 2 (lower is better)
Translates to: AETPVDVSAGVILIAVPLAVFGS*VETVPG
Trigger: ACCAGGAACTGTTTCTACCCAACTACCAAATACAGC...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp TTAATTACTGAAGTCAGTGATACTGTTGGTACAGGAGGTGGAACAGGAACCTTATGGGCAAGGAGAATGTaGCTGCTGAAACTGCATTCT +
Preference number: 2 (lower is better)
Translates to: LITEVSDTVGTGGGTGTLWARRM*LLKLHS
Trigger: AGAATGCAGTTTCAGCAGCCACATTCTCCTTGCCCA...TAAGGTTCCTGTTCCACCTCCTGTACCAACAGTATCACTGACTTCAGTAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp TTAGGAGACACTACTGGTTGTGTAGTTGAAATCAGAACAGATGATGCAAGGTGTCCACTGCCAGTGGTGTaGCCTAATGTAAGTTTGAGA +
Preference number: 2 (lower is better)
Translates to: LGDTTGCVVEIRTDDARCPLPVV*PNVSLR
Trigger: TCTCAAACTTACATTAGGCCACACCACTGGCAGTGG...ACACCTTGCATCATCTGTTCTGATTTCAACTACACAACCAGTAGTGTCTCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGTCATCTGAATCAAAGTaGTCTTTCTCCAGGATATCC +
Preference number: 2 (lower is better)
Translates to: AETPVDVSAGVILIAVPLSSESK*SFSRIS
Trigger: GGATATCCTGGAGAAAGATCACTTTGATTCAGATGA...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGAGATACAGTATTGGGTaGATTTTGATCTGGGTTGGT +
Preference number: 2 (lower is better)
Translates to: AETPVDVSAGVILIAVPLRYSIG*ILIWVG
Trigger: ACCAACCCAGATCAAAATTCACCCAATACTGTATCT...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp GTTTGGCTAAAAGGTGAAAGACTAGATGTAGTAGTTGTTCCAGCTACAGGTGAATCTATTGGCAACCACTaGCCACAGGGCATTTTGTAT +
Preference number: 2 (lower is better)
Translates to: VWLKGERLDVVVVPATGESIGNH*PQGILY
Trigger: ATACAAAATGCCCTGTGGCCAGTGGTTGCCAATAGA...TTCACCTGTAGCTGGAACAACTACTACATCTAGTCTTTCACCTTTTAGCCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp TGTGGAACTGTGTTTATTATTTTAGGGGATGTAGTCGCAGGTGTAGGTAAGGCAACCTTTCTGTTGAAGTaGTGGCACTTCTTTTGCAAC +
Preference number: 2 (lower is better)
Translates to: CGTVFIILGDVVAGVGKATFLLK*WHFFCN
Trigger: GTTGCAAAAGAAGTGCCACCACTTCAACAGAAAGGT...TGCCTTACCTACACCTGCGACTACATCCCCTAAAATAATAAACACAGTTCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp TGTGGAACTGTGTTTATTATTTTAGGGGATGTAGTCGCAGGTGTAGGTAAGGCAAGGCGACAAAGGCTGTaGTCTAGCACTACTTATATT +
Preference number: 2 (lower is better)
Translates to: CGTVFIILGDVVAGVGKARRQRL*SSTTYI
Trigger: AATATAAGTAGTGCTAGACCACAGCCTTTGTCGCCT...TGCCTTACCTACACCTGCGACTACATCCCCTAAAATAATAAACACAGTTCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp GTTGTGTTTATGAGTTGTGGTGATGTATGTACTGTGGGTATAGAACTTGCATTCTGGGGCAAAGCTAGCTaGAATGGAAACAGAAGTTGG +
Preference number: 2 (lower is better)
Translates to: VVFMSCGDVCTVGIELAFWGKAS*NGNRSW
Trigger: CCAACTTCTGTTTCCATTCCAGCTAGCTTTGCCCCA...GAATGCAAGTTCTATACCCACAGTACATACATCACCACAACTCATAAACACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp TTAGGAGACACTACTGGTTGTGTAGTTGAAATCAGAACAGATGATGCAAGGTGTATTTTTCCCCATGGATaGGGCAAAGCTAGCTGGAAT +
Preference number: 2 (lower is better)
Translates to: LGDTTGCVVEIRTDDARCIFPHG*GKASWN
Trigger: ATTCCAGCTAGCTTTGCCCCATCCATGGGGAAAAAT...ACACCTTGCATCATCTGTTCTGATTTCAACTACACAACCAGTAGTGTCTCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp TTAGGAGACACTACTGGTTGTGTAGTTGAAATCAGAACAGATGATGCAAGGTGTGTTTTATCTATCACGTaGCCCAAATCACCACTGCCA +
Preference number: 2 (lower is better)
Translates to: LGDTTGCVVEIRTDDARCVLSIT*PKSPLP
Trigger: TGGCAGTGGTGATTTGGGCCACGTGATAGATAAAAC...ACACCTTGCATCATCTGTTCTGATTTCAACTACACAACCAGTAGTGTCTCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp GTTGTGTTTATGAGTTGTGGTGATGTATGTACTGTGGGTATAGAACTTGCATTCGATATAAGGAGAACATaGCTGCCAGCTCCAAGACCT +
Preference number: 2 (lower is better)
Translates to: VVFMSCGDVCTVGIELAFDIRRT*LPAPRP
Trigger: AGGTCTTGGAGCTGGCAGCCATGTTCTCCTTATATC...GAATGCAAGTTCTATACCCACAGTACATACATCACCACAACTCATAAACACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CAA 90 bp CTTTCTTCAGGCGGCTCCTGTTTCTTTGGAAAGCCTTCATTAACTTaGGTTCCCATGGCAGCAATTCATTTAAAAGACGTATCAATGTAC +
Preference number: 2 (lower is better)
Translates to: LSSGGSCFFGKPSLT*VPMAAIHLKDVSMY
Trigger: GTACATTGATACGTCTTTTAAATGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCCAAAGAAACAGGAGCCGCCTGAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp AGATTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGAGATCAGGTTGTCTTCTaGAATCATCATAGTCTTTCT +
Preference number: 2 (lower is better)
Translates to: RLSFRNRYRTCGSWYCCRDQVVF*NHHSLS
Trigger: AGAAAGACTATGATGATTTCAGAAGACAACCTGATC...TCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp GTTTGGCTAAAAGGTGAAAGACTAGATGTAGTAGTTGTTCCAGCTACAGGTGAATGTCTGTGGGAAAGATaGACAATGTTGTTCTGTACC +
Preference number: 2 (lower is better)
Translates to: VWLKGERLDVVVVPATGECLWER*TMLFCT
Trigger: GGTACAGAACAACATTGTTCATCTTTCCCACAGACA...TTCACCTGTAGCTGGAACAACTACTACATCTAGTCTTTCACCTTTTAGCCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp GTTGTGTTTATGAGTTGTGGTGATGTATGTACTGTGGGTATAGAACTTGCATTCTGTTCCAGCTACAGGTaGAAAAGCAGAGGAAGAAGT +
Preference number: 2 (lower is better)
Translates to: VVFMSCGDVCTVGIELAFCSSYR*KSRGRS
Trigger: ACTTCTTCCTCTGCTTTTTCACCTGTAGCTGGAACA...GAATGCAAGTTCTATACCCACAGTACATACATCACCACAACTCATAAACACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR GCA 90 bp CATAAGTTTCTGAACTGGAGTCCCACTGATTACATCTCCATTTGTTGCTGCTGTGAGAAAGCTCTTTTGTaGTGTCATCCACATAATCAG +
Preference number: 2 (lower is better)
Translates to: HKFLNWSPTDYISICCCCEKALL*CHPHNQ
Trigger: CTGATTATGTGGATGACAGCACAAAAGAGCTTTCTC...ACAGCAGCAACAAATGGAGATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCAATTTTGAAGATCTATTaGCAACCACTGGCCACAGGG +
Preference number: 2 (lower is better)
Translates to: DSQNLSLLELNYHLLTMAILKIY*QPLATG
Trigger: CCCTGTGGCCAGTGGTTGCCAATAGATCTTCAAAAT...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp TGTGGAACTGTGTTTATTATTTTAGGGGATGTAGTCGCAGGTGTAGGTAAGGCACATAAGTTTCTGAACTaGAGTCCCACTGATTACATC +
Preference number: 2 (lower is better)
Translates to: CGTVFIILGDVVAGVGKAHKFLN*SPTDYI
Trigger: GATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG...TGCCTTACCTACACCTGCGACTACATCCCCTAAAATAATAAACACAGTTCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp AAGGAATTATTTGATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTAGAAATCCCTGGTGAATaGAACTGGAGTGAAGTCCGA +
Preference number: 2 (lower is better)
Translates to: KELFDASVIFWAELSIGVEIPGE*NWSEVR
Trigger: TCGGACTTCACTCCAGTTCCATTCACCAGGGATTTC...TACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATCAAATAATTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CAA 90 bp TCTTGCTTTGCTTCAGAAGAATCAGCAGTCTGTTGTGCAAAACAGTaGAAGGAACTACCAGGATTTGTAGACCCATTTAGTGTTGTTGTT +
Preference number: 2 (lower is better)
Translates to: SCFASEESAVCCAKQ*KELPGFVDPFSVVV
Trigger: AACAACAACACTAAATGGGTCTACAAATCCTGGTAGTTCCTTCAACTGTTTTGCACAACAGACTGCTGATTCTTCTGAAGCAAAGCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CAA 90 bp ATTTATTTTTATTGGTGTGCCCACTGTAGACGGAATCAGTACTATTaGGGGTTGCTCTGGAGTCTTAACATATGCTTTATGCAATGGAGG +
Preference number: 2 (lower is better)
Translates to: IYFYWCAHCRRNQYY*GLLWSLNICFMQWR
Trigger: CCTCCATTGCATAAAGCATATGTTAAGACTCCAGAGCAACCCCAAATAGTACTGATTCCGTCTACAGTGGGCACACCAATAAAAATAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp TTCTTAGAGGATGTTGTAGAGGTTGGCCACTTAAGGAATTATTTGATGCTAGTGAGAAGAGGGCATGTGTaGAGTTTTATCTATCACGTG +
Preference number: 2 (lower is better)
Translates to: FLEDVVEVGHLRNYLMLVRRGHV*SFIYHV
Trigger: CACGTGATAGATAAAACTTCACACATGCCCTCTTCT...CACTAGCATCAAATAATTCCTTAAGTGGCCAACCTCTACAACATCCTCTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR GCA 90 bp GTTTGGCTAAAAGGTGAAAGACTAGATGTAGTAGTTGTTCCAGCTACAGGTGAAATCAGCAGTCTGTTGTaGAAAACAGTTGAAGGAACT +
Preference number: 2 (lower is better)
Translates to: VWLKGERLDVVVVPATGEISSLL*KTVEGT
Trigger: AGTTCCTTCAACTGTTTTGCACAACAGACTGCTGAT...TTCACCTGTAGCTGGAACAACTACTACATCTAGTCTTTCACCTTTTAGCCAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp AAGGAATTATTTGATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTACCTTTTGTATTGGTGTaGCAGGTCAATGCTGGCTTT +
Preference number: 2 (lower is better)
Translates to: KELFDASVIFWAELSIGVPFVLV*QVNAGF
Trigger: AAAGCCAGCATTGACCTGCCACACCAATACAAAAGG...TACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATCAAATAATTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp GTTGTGTTTATGAGTTGTGGTGATGTATGTACTGTGGGTATAGAACTTGCATTCATCCAGAGGTTCTGTTaGGTCTATAGACTTACTGAT +
Preference number: 2 (lower is better)
Translates to: VVFMSCGDVCTVGIELAFIQRFC*VYRLTD
Trigger: ATCAGTAAGTCTATAGACTCAACAGAACCTCTGGAT...GAATGCAAGTTCTATACCCACAGTACATACATCACCACAACTCATAAACACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp AAGGAATTATTTGATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTAGTTGTGCAAAACAGTTaGAGGAACTACCAGGATTTG +
Preference number: 2 (lower is better)
Translates to: KELFDASVIFWAELSIGVVVQNS*RNYQDL
Trigger: CAAATCCTGGTAGTTCCTTCAACTGTTTTGCACAAC...TACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATCAAATAATTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCAGCTGAGGAGCAAAAGTaGAAACTGAACTTGAAGATA +
Preference number: 2 (lower is better)
Translates to: DSQNLSLLELNYHLLTMAAEEQK*KLNLKI
Trigger: TATCTTCAAGTTCAGTTTTCACTTTTGCTCCTCAGC...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR GCA 90 bp GTTGTGTTTATGAGTTGTGGTGATGTATGTACTGTGGGTATAGAACTTGCATTCCTGTTGTCTCATTTGTaGTTAACTTTGCCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: VVFMSCGDVCTVGIELAFLLSHL*LTLPSS
Trigger: GGAAGAAGGCAAAGTTAAGCACAAATGAGACAACAG...GAATGCAAGTTCTATACCCACAGTACATACATCACCACAACTCATAAACACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR GCA 90 bp GTTTGGCTAAAAGGTGAAAGACTAGATGTAGTAGTTGTTCCAGCTACAGGTGAACTGAAACAGTCAATCTaGACATCACTTTCTAGATTC +
Preference number: 2 (lower is better)
Translates to: VWLKGERLDVVVVPATGELKQSI*TSLSRF
Trigger: GAATCTAGAAAGTGATGTGCAGATTGACTGTTTCAG...TTCACCTGTAGCTGGAACAACTACTACATCTAGTCTTTCACCTTTTAGCCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR GCA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCATGGAGTCTTAACATATaGTTTATGCAATGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: DSQNLSLLELNYHLLTMAWSLNI*FMQWRR
Trigger: CCTCCTCCATTGCATAAAGCATATGTTAAGACTCCA...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CCA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCACGGCTCCTGTTTCTTTaGAAAGCCTTCATTAACTTT +
Preference number: 2 (lower is better)
Translates to: DSQNLSLLELNYHLLTMARLLFL*KAFINF
Trigger: AAAGTTAATGAAGGCTTTCCAAAGAAACAGGAGCCG...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTTAAACACAGAACCTTaGAACCCTCCTCAGAACAGT +
Preference number: 2 (lower is better)
Translates to: PYHRYAATVQIQEETCQCLNTEP*NPPQNS
Trigger: ACTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
3UTR-3UTR TCA 90 bp AAGGAATTATTTGATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTAAAGAATAGATGGAGCTaGTACCAGCATAAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: KELFDASVIFWAELSIGVKNRWS*YQHKFL
Trigger: CAGAAACTTATGCTGGTATCAGCTCCATCTATTCTT...TACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATCAAATAATTCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR GCA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCAAATGATGGCTCTGTATaGTTTGATTCACTGAAACAG +
Preference number: 2 (lower is better)
Translates to: DSQNLSLLELNYHLLTMANDGSV*FDSLKQ
Trigger: CTGTTTCAGTGAATCAAAGCATACAGAGCCATCATT...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR TCA 72 bp GATGCAGCTCTGTCAGGCTTCTCTAAGCCCGACGACTaGAAAGCAGGGAAGACAGACGCAGGACTTCGACTG +
Preference number: 3 (lower is better)
Translates to: DAALSGFSKPDD*KAGKTDAGLRL
Trigger: CAGTCGAAGTCCTGCGTCTGTCTTCCCTGCTTTTCAGTCGTCGGGCTTAGAGAAGCCTGACAGAGCTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 72 bp GAGGCTGACCTGTGGAGGAAATGGTCGGTGAAGCACTaGGCAAGGAGAATGTGGCTGCTGAAACTGCATTCT +
Preference number: 3 (lower is better)
Translates to: EADLWRKWSVKH*ARRMWLLKLHS
Trigger: AGAATGCAGTTTCAGCAGCCACATTCTCCTTGCCCAGTGCTTCACCGACCATTTCCTCCACAGGTCAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp CAGAGCGATACTGAGGGTGCTCTCATTTCTCTGTGGAAAAGGCTCTCCTCACAGGGCCTCGAGAAAGTCTaGGAAAGAAGCACTTTCTGC +
Preference number: 3 (lower is better)
Translates to: QSDTEGALISLWKRLSSQGLEKV*ERSTFC
Trigger: GCAGAAAGTGCTTCTTTCCAAGACTTTCTCGAGGCC...CTGTGAGGAGAGCCTTTTCCACAGAGAAATGAGAGCACCCTCAGTATCGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436015.6
3UTR CCA 72 bp GGAGAAGAGGGCATGTGTGAAGTTTTATCTATCACGTaGCCCAAATCACCACTGCCAGTGGTGTGGCCTAAT +
Preference number: 3 (lower is better)
Translates to: GEEGMCEVLSIT*PKSPLPVVWPN
Trigger: ATTAGGCCACACCACTGGCAGTGGTGATTTGGGCCACGTGATAGATAAAACTTCACACATGCCCTCTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp AGCCGTGTGAATGGTAGTGCCACCTGGAGCAGAACTGTAACTGGGGGTTTTTACGTGGTGGCACTTCTTTaGCAACTGCTTTTCCTTCTT +
Preference number: 3 (lower is better)
Translates to: SRVNGSATWSRTVTGGFYVVALL*QLLFLL
Trigger: AAGAAGGAAAAGCAGTTGCAAAAGAAGTGCCACCAC...GTAAAAACCCCCAGTTACAGTTCTGCTCCAGGTGGCACTACCATTCACACGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp AGCCGTGTGAATGGTAGTGCCACCTGGAGCAGAACTGTAACTGGGGGTTTTTACAAGCCTTCATTAACTTaGGTTCCCATGGCAGCAATT +
Preference number: 3 (lower is better)
Translates to: SRVNGSATWSRTVTGGFYKPSLT*VPMAAI
Trigger: AATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTT...GTAAAAACCCCCAGTTACAGTTCTGCTCCAGGTGGCACTACCATTCACACGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp AAGATGCAGCTCTGTCAGGCTTCTCTAAGCCCGACGACTGAAAAGCAGGGAAGACAGTACTATTTGGGGTaGCTCTGGAGTCTTAACATA +
Preference number: 3 (lower is better)
Translates to: KMQLCQASLSPTTEKQGRQYYLG*LWSLNI
Trigger: TATGTTAAGACTCCAGAGCAACCCCAAATAGTACTG...TCTTCCCTGCTTTTCAGTCGTCGGGCTTAGAGAAGCCTGACAGAGCTGCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp AAGATGCAGCTCTGTCAGGCTTCTCTAAGCCCGACGACTGAAAAGCAGGGAAGACAGTGTTTCCGAGACTaGATGAGCAAAGTCTATTTG +
Preference number: 3 (lower is better)
Translates to: KMQLCQASLSPTTEKQGRQCFRD*MSKVYL
Trigger: CAAATAGACTTTGCTCATCAAGTCTCGGAAACACTG...TCTTCCCTGCTTTTCAGTCGTCGGGCTTAGAGAAGCCTGACAGAGCTGCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 72 bp TCTATCACGTGGCCCAAATCACCACTGCCAGTGGTGTaGCCTAATGTAAGTTTGAGATTTTTCCCCATGGAT +
Preference number: 3 (lower is better)
Translates to: SITWPKSPLPVV*PNVSLRFFPMD
Trigger: ATCCATGGGGAAAAATCTCAAACTTACATTAGGCCACACCACTGGCAGTGGTGATTTGGGCCACGTGATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 72 bp AAGGAGAACATGGCTGCCAGCTCCAAGACCTTGTGGTaGAACAATAAACCGGGTTCCGTTAATCATAATCTG +
Preference number: 3 (lower is better)
Translates to: KENMAASSKTLW*NNKPGSVNHNL
Trigger: CAGATTATGATTAACGGAACCCGGTTTATTGTTCCACCACAAGGTCTTGGAGCTGGCAGCCATGTTCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR TCA 72 bp GTGATCTTCTGGGCAGAGTTATCTATTGGTGTAGATTaGATGCCTTGGCCACTGTTAAGAACTAAGGGGGCT +
Preference number: 3 (lower is better)
Translates to: VIFWAELSIGVD*MPWPLLRTKGA
Trigger: AGCCCCCTTAGTTCTTAACAGTGGCCAAGGCATTCAATCTACACCAATAGATAACTCTGCCCAGAAGATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp TTCTGGGCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTACTTTGCCTTCTTCCTaGGAGAAAGCTCTTTTGTGC +
Preference number: 3 (lower is better)
Translates to: FWAETPVDVSAGVILIAVTLPSS*EKALLC
Trigger: GCACAAAAGAGCTTTCTCCAAGGAAGAAGGCAAAGT...AACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR TCA 72 bp ACAAATAGAGGACTTCAAGGGAGAAGAGGGCATGTGTaGAGTTTTATCTATCACGTGGCCCAAATCACCACT +
Preference number: 3 (lower is better)
Translates to: TNRGLQGRRGHV*SFIYHVAQITT
Trigger: AGTGGTGATTTGGGCCACGTGATAGATAAAACTTCACACATGCCCTCTTCTCCCTTGAAGTCCTCTATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR TCA 72 bp GGTGGAACAATAAACCGGGTTCCGTTAATCATAATCTaGGTACCAGGTGCCAAAGGTGTACTGGTATTGATG +
Preference number: 3 (lower is better)
Translates to: GGTINRVPLIII*VPGAKGVLVLM
Trigger: CATCAATACCAGTACACCTTTGGCACCTGGTACTCAGATTATGATTAACGGAACCCGGTTTATTGTTCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 72 bp TTGTATACCATTTGTAAAGGACCTTTTGTATTGGTGTaGCAGGTCAATGCTGGCTTTATCGGGCTTGCTTCC +
Preference number: 3 (lower is better)
Translates to: LYTICKGPFVLV*QVNAGFIGLAS
Trigger: GGAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCACACCAATACAAAAGGTCCTTTACAAATGGTATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 72 bp CACTGTAGACGGAATCAGTACTATTTGGGGTTGCTCTaGAGTCTTAACATATGCTTTATGCAATGGAGGAGG +
Preference number: 3 (lower is better)
Translates to: HCRRNQYYLGLL*SLNICFMQWRR
Trigger: CCTCCTCCATTGCATAAAGCATATGTTAAGACTCCAGAGCAACCCCAAATAGTACTGATTCCGTCTACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 72 bp TATAAGGAGAACATGGCTGCCAGCTCCAAGACCTTGTaGTGGAACAATAAACCGGGTTCCGTTAATCATAAT +
Preference number: 3 (lower is better)
Translates to: YKENMAASSKTL*WNNKPGSVNHN
Trigger: ATTATGATTAACGGAACCCGGTTTATTGTTCCACCACAAGGTCTTGGAGCTGGCAGCCATGTTCTCCTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp TGTGGAACTGTGTTTATTATTTTAGGGGATGTAGTCGCAGGTGTAGGTAAGGCATATTTTGAAGATCTATaGGCAACCACTGGCCACAGG +
Preference number: 3 (lower is better)
Translates to: CGTVFIILGDVVAGVGKAYFEDL*ATTGHR
Trigger: CCTGTGGCCAGTGGTTGCCAATAGATCTTCAAAATA...TGCCTTACCTACACCTGCGACTACATCCCCTAAAATAATAAACACAGTTCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp TTCTGGGCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTAAGCAGAGGAAGAAGTaGTTGATTTTGGCACCAGAA +
Preference number: 3 (lower is better)
Translates to: FWAETPVDVSAGVILIAVKQRKK*LILAPE
Trigger: TTCTGGTGCCAAAATCAACAACTTCTTCCTCTGCTT...AACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp GCTACTTGGCAGTGGAGGATTACTGGGGCAAATGGCAGAAACCAAAGATGTCTTCTGAATTACCACTTGTaGACAATGGCAAAATATAGC +
Preference number: 3 (lower is better)
Translates to: ATWQWRITGANGRNQRCLLNYHL*TMAKYS
Trigger: GCTATATTTTGCCATTGTCAACAAGTGGTAATTCAG...AAGACATCTTTGGTTTCTGCCATTTGCCCCAGTAATCCTCCACTGCCAAGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR TCA 72 bp TCATATGAAAATATCAGCTGTGTAACATCAGAAGCATaGCGCCTACAGGAAGATGGCCTCGAGAAAGTCTTG +
Preference number: 3 (lower is better)
Translates to: SYENISCVTSEA*RLQEDGLEKVL
Trigger: CAAGACTTTCTCGAGGCCATCTTCCTGTAGGCGTCATGCTTCTGATGTTACACAGCTGATATTTTCATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436015.6
3UTR GCA 72 bp AACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTaGAGTTCCATTGCCAGAAGAAAGAATAGATGGAGC +
Preference number: 3 (lower is better)
Translates to: NTCRCQRRCHIN*SSIARRKNRWS
Trigger: GCTCCATCTATTCTTTCTTCTGGCAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR GCA 72 bp AGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTaGCGAATGTGGAACTGTGTTTATTATTTTAGGGGA +
Preference number: 3 (lower is better)
Translates to: RNRYRTCGSWYC*RMWNCVYYFRG
Trigger: TCCCCTAAAATAATAAACACAGTTCCACATTCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 72 bp GCTCCATATTTTGGATTAGTAGATATAAGGAGAACATaGCTGCCAGCTCCAAGACCTTGTGGTGGAACAATA +
Preference number: 3 (lower is better)
Translates to: APYFGLVDIRRT*LPAPRPCGGTI
Trigger: TATTGTTCCACCACAAGGTCTTGGAGCTGGCAGCCATGTTCTCCTTATATCTACTAATCCAAAATATGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp TTCTGGGCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTTCCTTTTTCAACAGCTaGCTTCTAGCCATAGGAAAA +
Preference number: 3 (lower is better)
Translates to: FWAETPVDVSAGVILIAVSFFNS*LLAIGK
Trigger: TTTTCCTATGGCTAGAAGCAAGCTGTTGAAAAAGGA...AACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGCCCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGAAGGAGGCAGTTGATTaGTTAAGGTCACTTTATTCC +
Preference number: 3 (lower is better)
Translates to: AETPVDVSAGVILIAVPLKEAVD*LRSLYS
Trigger: GGAATAAAGTGACCTTAACAAATCAACTGCCTCCTT...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGACAGTTCCTGGTGAGTaGACAAAAACTGATGCTAAA +
Preference number: 3 (lower is better)
Translates to: AETPVDVSAGVILIAVPLTVPGE*TKTDAK
Trigger: TTTAGCATCAGTTTTTGTCAACTCACCAGGAACTGT...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp CATAAGTTTCTGAACTGGAGTCCCACTGATTACATCTCCATTTGTTGCTGCTGTCACAGTTTTCAGCTCTaGCTTTGCTTCAGAAGAATC +
Preference number: 3 (lower is better)
Translates to: HKFLNWSPTDYISICCCCHSFQL*LCFRRI
Trigger: GATTCTTCTGAAGCAAAGCAAGAGCTGAAAACTGTG...ACAGCAGCAACAAATGGAGATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp TGTGGAACTGTGTTTATTATTTTAGGGGATGTAGTCGCAGGTGTAGGTAAGGCAAAGAAGTTGTTGATTTaGGCACCAGAAATGCCTGCA +
Preference number: 3 (lower is better)
Translates to: CGTVFIILGDVVAGVGKAKKLLI*APEMPA
Trigger: TGCAGGCATTTCTGGTGCCAAAATCAACAACTTCTT...TGCCTTACCTACACCTGCGACTACATCCCCTAAAATAATAAACACAGTTCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp GTTGTGTTTATGAGTTGTGGTGATGTATGTACTGTGGGTATAGAACTTGCATTCCGGAATCAGTACTATTaGGGGTTGCTCTGGAGTCTT +
Preference number: 3 (lower is better)
Translates to: VVFMSCGDVCTVGIELAFRNQYY*GLLWSL
Trigger: AAGACTCCAGAGCAACCCCAAATAGTACTGATTCCG...GAATGCAAGTTCTATACCCACAGTACATACATCACCACAACTCATAAACACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR GCA 72 bp CTCTTGCTTTGCTTCAGAAGAATCAGCAGTCTGTTGTaGAAAACAGTTGAAGGAACTACCAGGATTTGTAGA +
Preference number: 3 (lower is better)
Translates to: LLLCFRRISSLL*KTVEGTTRICR
Trigger: TCTACAAATCCTGGTAGTTCCTTCAACTGTTTTGCACAACAGACTGCTGATTCTTCTGAAGCAAAGCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp AGATTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGAATCCACATAATCAGTTaGTTTGGACTGTCGTTTAAG +
Preference number: 3 (lower is better)
Translates to: RLSFRNRYRTCGSWYCCRIHIIS*FGLSFK
Trigger: CTTAAACGACAGTCCAAACAAACTGATTATGTGGAT...TCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp TGTGGAACTGTGTTTATTATTTTAGGGGATGTAGTCGCAGGTGTAGGTAAGGCACATTTGTGCTTAACTTaGCCTTCTTCCTTGGAGAAA +
Preference number: 3 (lower is better)
Translates to: CGTVFIILGDVVAGVGKAHLCLT*PSSLEK
Trigger: TTTCTCCAAGGAAGAAGGCAAAGTTAAGCACAAATG...TGCCTTACCTACACCTGCGACTACATCCCCTAAAATAATAAACACAGTTCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp CATAAGTTTCTGAACTGGAGTCCCACTGATTACATCTCCATTTGTTGCTGCTGTTATTCCCAATATTCTTaGCAAGCAAAGCCTGAATGG +
Preference number: 3 (lower is better)
Translates to: HKFLNWSPTDYISICCCCYSQYS*QAKPEW
Trigger: CCATTCAGGCTTTGCTTGCAAAGAATATTGGGAATA...ACAGCAGCAACAAATGGAGATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp TTAATTACTGAAGTCAGTGATACTGTTGGTACAGGAGGTGGAACAGGAACCTTATTTGTAAAGGACCTTTaGTATTGGTGTGGCAGGTCA +
Preference number: 3 (lower is better)
Translates to: LITEVSDTVGTGGGTGTLFVKDL*YWCGRS
Trigger: TGACCTGCCACACCAATACAAAAGGTCCTTTACAAA...TAAGGTTCCTGTTCCACCTCCTGTACCAACAGTATCACTGACTTCAGTAATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCACATTTAGTGTTGTTGTaGATGACAGAGGCTGACCTG +
Preference number: 3 (lower is better)
Translates to: DSQNLSLLELNYHLLTMAHLVLL*MTEADL
Trigger: CAGGTCAGCCTCTGTCATCAACAACAACACTAAATG...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp TTAGGAGACACTACTGGTTGTGTAGTTGAAATCAGAACAGATGATGCAAGGTGTTTTTCAGCTCTTGCTTaGCTTCAGAAGAATCAGCAG +
Preference number: 3 (lower is better)
Translates to: LGDTTGCVVEIRTDDARCFSALA*LQKNQQ
Trigger: CTGCTGATTCTTCTGAAGCAAAGCAAGAGCTGAAAA...ACACCTTGCATCATCTGTTCTGATTTCAACTACACAACCAGTAGTGTCTCCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp GTTTGGCTAAAAGGTGAAAGACTAGATGTAGTAGTTGTTCCAGCTACAGGTGAATGTTGTGCAAAACAGTaGAAGGAACTACCAGGATTT +
Preference number: 3 (lower is better)
Translates to: VWLKGERLDVVVVPATGECCAKQ*KELPGF
Trigger: AAATCCTGGTAGTTCCTTCAACTGTTTTGCACAACA...TTCACCTGTAGCTGGAACAACTACTACATCTAGTCTTTCACCTTTTAGCCAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp TTAGGAGACACTACTGGTTGTGTAGTTGAAATCAGAACAGATGATGCAAGGTGTTGGCCTAATGTAAGTTaGAGATTTTTCCCCATGGAT +
Preference number: 3 (lower is better)
Translates to: LGDTTGCVVEIRTDDARCWPNVS*RFFPMD
Trigger: ATCCATGGGGAAAAATCTCAAACTTACATTAGGCCA...ACACCTTGCATCATCTGTTCTGATTTCAACTACACAACCAGTAGTGTCTCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp TGTGGAACTGTGTTTATTATTTTAGGGGATGTAGTCGCAGGTGTAGGTAAGGCATCTGACTCACAAAATTaGAGCTTACTGGAACTGAAT +
Preference number: 3 (lower is better)
Translates to: CGTVFIILGDVVAGVGKASDSQN*SLLELN
Trigger: ATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTCAGA...TGCCTTACCTACACCTGCGACTACATCCCCTAAAATAATAAACACAGTTCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR TCA 72 bp GAAAGAATAGATGGAGCTGATACCAGCATAAGTTTCTaGACTGGAGTCCCACTGATTACATCTCCATTTGTT +
Preference number: 3 (lower is better)
Translates to: ERIDGADTSISF*TGVPLITSPFV
Trigger: AACAAATGGAGATGTAATCAGTGGGACTCCAGTTCAGAAACTTATGCTGGTATCAGCTCCATCTATTCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR TCA 72 bp GGCAGATACAACAATCTGAGAGAGAGATGGAGAGAGTaGAGAAACCTTAGATGCTGGAGTATTTATGGTATT +
Preference number: 3 (lower is better)
Translates to: GRYNNLRERWRE*RNLRCWSIYGI
Trigger: AATACCATAAATACTCCAGCATCTAAGGTTTCTTCACTCTCTCCATCTCTCTCTCAGATTGTTGTATCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR GCA 72 bp GGCTCTGTATGCTTTGATTCACTGAAACAGTCAATCTaGACATCACTTTCTAGATTCTCAACTGTTGTCTCA +
Preference number: 3 (lower is better)
Translates to: GSVCFDSLKQSI*TSLSRFSTVVS
Trigger: TGAGACAACAGTTGAGAATCTAGAAAGTGATGTGCAGATTGACTGTTTCAGTGAATCAAAGCATACAGAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR GCA 72 bp TTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTaGTGCCGAATGTGGAACTGTGTTTATTATTTTAGG +
Preference number: 3 (lower is better)
Translates to: FRNRYRTCGSWY*CRMWNCVYYFR
Trigger: CCTAAAATAATAAACACAGTTCCACATTCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 72 bp AAACTGGTTTTTCCACAGCAAGAGCATTTCTACCTGTaGAAGGAGGCAGTTGATTTGTTAAGGTCACTTTAT +
Preference number: 3 (lower is better)
Translates to: KLVFPQQEHFYL*KEAVDLLRSLY
Trigger: ATAAAGTGACCTTAACAAATCAACTGCCTCCTTCCACAGGTAGAAATGCTCTTGCTGTGGAAAAACCAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 72 bp GCAAAGCTAGCTGGAATGGAAACAGAAGTTGGTGTTTaGCTAAAAGGTGAAAGACTAGATGTAGTAGTTGTT +
Preference number: 3 (lower is better)
Translates to: AKLAGMETEVGV*LKGERLDVVVV
Trigger: AACAACTACTACATCTAGTCTTTCACCTTTTAGCCAAACACCAACTTCTGTTTCCATTCCAGCTAGCTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 72 bp TTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTaGTACTGCTGCCGAATGTGGAACTGTGTTTATTAT +
Preference number: 3 (lower is better)
Translates to: LSFRNRYRTCGS*YCCRMWNCVYY
Trigger: ATAATAAACACAGTTCCACATTCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp TTAGGAGACACTACTGGTTGTGTAGTTGAAATCAGAACAGATGATGCAAGGTGTTCTTCGGTAAGTCTTTaGAAGGCAATTCCTTTTTCA +
Preference number: 3 (lower is better)
Translates to: LGDTTGCVVEIRTDDARCSSVSL*KAIPFS
Trigger: TGAAAAAGGAATTGCCTTCAAAAGACTTACCGAAGA...ACACCTTGCATCATCTGTTCTGATTTCAACTACACAACCAGTAGTGTCTCCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp TTAGGAGACACTACTGGTTGTGTAGTTGAAATCAGAACAGATGATGCAAGGTGTCTTTACAGAGCTATTTaGAAGATCTATTGGCAACCA +
Preference number: 3 (lower is better)
Translates to: LGDTTGCVVEIRTDDARCLYRAI*KIYWQP
Trigger: TGGTTGCCAATAGATCTTCAAAATAGCTCTGTAAAG...ACACCTTGCATCATCTGTTCTGATTTCAACTACACAACCAGTAGTGTCTCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp GTTGTGTTTATGAGTTGTGGTGATGTATGTACTGTGGGTATAGAACTTGCATTCTTACCGAACTACTTGTaGTTGATGGTAGTAGAGTAC +
Preference number: 3 (lower is better)
Translates to: VVFMSCGDVCTVGIELAFLPNYL*LMVVEY
Trigger: GTACTCTACTACCATCAACAACAAGTAGTTCGGTAA...GAATGCAAGTTCTATACCCACAGTACATACATCACCACAACTCATAAACACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTTTAAACACAGAACCTaGAAACCCTCCTCAGAACAG +
Preference number: 3 (lower is better)
Translates to: PYHRYAATVQIQEETCQCFKHRT*KPSSEQ
Trigger: CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
3UTR-3UTR CAA 90 bp GTTGTGTTTATGAGTTGTGGTGATGTATGTACTGTGGGTATAGAACTTGCATTCGGACGACAATTCAGTTaGAGGTTTATTTGTGTTTAC +
Preference number: 3 (lower is better)
Translates to: VVFMSCGDVCTVGIELAFGRQFS*RFICVY
Trigger: GTAAACACAAATAAACCTCAAACTGAATTGTCGTCC...GAATGCAAGTTCTATACCCACAGTACATACATCACCACAACTCATAAACACAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CCA 72 bp GGTGTAATTGTTTTGTTGAAAGCTGTATTTGGTAGTTaGGTAGAAACAGTTCCTGGTGAGTTGACAAAAACT +
Preference number: 3 (lower is better)
Translates to: GVIVLLKAVFGS*VETVPGELTKT
Trigger: AGTTTTTGTCAACTCACCAGGAACTGTTTCTACCCAACTACCAAATACAGCTTTCAACAAAACAATTACACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCAAGAAAACAAAGCCTaGTTGCAAGCTAATGAAAAG +
Preference number: 3 (lower is better)
Translates to: PYHRYAATVQIQEETCQCQENKA*LQANEK
Trigger: CTTTTCATTAGCTTGCAACAAGGCTTTGTTTTCTTG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
3UTR TCA 72 bp GAAGAAACCACTGATTCATTAACAGGGGTAATATTCTaGCTCACAAAATTTGAGCTTACTGGAACTGAATTA +
Preference number: 3 (lower is better)
Translates to: EETTDSLTGVIF*LTKFELTGTEL
Trigger: TAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTCAGAATATTACCCCTGTTAATGAATCAGTGGTTTCTTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTCCTTCGGCCGCCGGTaGCGGCCGCTCTTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQSFGRR*RPLFLP
Trigger: GGGGAGGAAGAGCGGCCGCCACCGGCGGCCGAAGGA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGTGCTGGGGGACGCGTaGGCGCGAGCCGCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQVLGDA*ARAASS
Trigger: TGAGGAAGCGGCTCGCGCTCACGCGTCCCCCAGCAC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399933.8
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGGTCTGGGCCGCCGCTaGCACCTCCTCCTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQGLGRR*HLLLVV
Trigger: GACGACGAGGAGGAGGTGGCAGCGGCGGCCCAGACC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGCCGGCAGGCCTAGGCTaGGCGGTGTGGAACAGCCGC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQPAGLG*AVWNSR
Trigger: GCGGCTGTTCCACACCGCCCAGCCTAGGCCTGCCGG...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGCAGAAAGGGGGCGGTaGGGCCCCGGTGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQAERGR*GPGASP
Trigger: AGGAGAAGCACCGGGGCCTCACCGCCCCCTTTCTGC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGAGGCACTCCTTCCGTaGGCCGGCCCTGAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQEALLP*AGPEVW
Trigger: CCAGACCTCAGGGCCGGCCCACGGAAGGAGTGCCTC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGCGGTGAGGCCCCGGTaGTTCTCCTGCAGGAACTCG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQAVRPR*FSCRNS
Trigger: CGAGTTCCTGCAGGAGAAGCACCGGGGCCTCACCGC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CAGAGCGATACTGAGGGTGCTCTCATTTCTCTGTGGAAAAGGCTCTCCTCACAGGGCTCCTGGTACTGCTaGCGAATGTGGAACTGTGTT +
Preference number: 4 (lower is better)
Translates to: QSDTEGALISLWKRLSSQGSWYC*RMWNCV
Trigger: AACACAGTTCCACATTCGGCAGCAGTACCAGGAGCC...CTGTGAGGAGAGCCTTTTCCACAGAGAAATGAGAGCACCCTCAGTATCGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR GCA 90 bp AAGATGCAGCTCTGTCAGGCTTCTCTAAGCCCGACGACTGAAAAGCAGGGAAGATGTGGCTCCTGGTACTaGTGCCGAATGTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: KMQLCQASLSPTTEKQGRCGSWY*CRMWNC
Trigger: ACAGTTCCACATTCGGCAGCAGTACCAGGAGCCACA...TCTTCCCTGCTTTTCAGTCGTCGGGCTTAGAGAAGCCTGACAGAGCTGCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGGCAGAAGGAGGCGGTaGACGGACGGGGCCCGGCGA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNGRRRR*TDGARR
Trigger: TCGCCGGGCCCCGTCCGTGCACCGCCTCCTTCTGCC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTCCTTCGGCCGCCGGTaGCGGCCGCTCTTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSFGRR*RPLFLP
Trigger: GGGGAGGAAGAGCGGCCGCCACCGGCGGCCGAAGGA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGGGTGCCGAAGCCGTGTaGATGGTAGTGCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: AETPVDVSAGVILIAVPLGAEAV*MVVPPG
Trigger: TCCAGGTGGCACTACCATTCACACGGCTTCGGCACC...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATATGCCCTGTCCGGGCTaGTGCGGGAAGGCGCGACCG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNMPCPG*CGKARP
Trigger: CGGTCGCGCCTTCCCGCAGCAGCCCGGACAGGGCAT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTCTGCAGCAGACACATaGCCTGTCCGGGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQSAADT*PVRAAA
Trigger: CGCAGCAGCCCGGACAGGGCATGTGTCTGCTGCAGA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CTGTGTAACATCAGAAGCATGACGCCTACAGGAAGATGGCCTCGAGAAAGTCTTAGAACGTGTGGCTCCTaGTACTGCTGCCGAATGTGG +
Preference number: 4 (lower is better)
Translates to: LCNIRSMTPTGRWPRESLRTCGS*YCCRMW
Trigger: CCACATTCGGCAGCAGTACCAGGAGCCACACGTTCT...AAGACTTTCTCGAGGCCATCTTCCTGTAGGCGTCATGCTTCTGATGTTACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCCGCCACATCGGGCCTaGCTCTCCTCAGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCPPHRA*LSSAAG
Trigger: GCCGGCGGCTGAGGAGAGCCAGGCCCGATGTGGCGG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399933.8
CDS-3UTR CCA 90 bp CACAGAGTTCCTCAGACAGTGTCCCAGGTGATGGACATGGAGACTTGGGCTGAGCTCAAGAAAGTTGGATaGCAGCTTGGCACACTTAAG +
Preference number: 4 (lower is better)
Translates to: HRVPQTVSQVMDMETWAELKKVG*QLGTLK
Trigger: CTTAAGTGTGCCAAGCTGCCATCCAACTTTCTTGAG...CTCAGCCCAAGTCTCCATGTCCATCACCTGGGACACTGTCTGAGGAACTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR CCA 90 bp CACAGAGTTCCTCAGACAGTGTCCCAGGTGATGGACATGGAGACTTGGGCTGAGAATGCTCAAGAAAGTTaGATGGCAGCTTGGCACACT +
Preference number: 4 (lower is better)
Translates to: HRVPQTVSQVMDMETWAENAQES*MAAWHT
Trigger: AGTGTGCCAAGCTGCCATCCAACTTTCTTGAGCATT...CTCAGCCCAAGTCTCCATGTCCATCACCTGGGACACTGTCTGAGGAACTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTCCATCTCTTCCTCCTaGTCGTCCGCGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQSISSS*SSASSS
Trigger: GCTGGAGGACGCGGACGATCAGGAGGAAGAGATGGA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGCAGAAAGGGGGCGGTaGGGCCCCGGTGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNAERGR*GPGASP
Trigger: AGGAGAAGCACCGGGGCCTCACCGCCCCCTTTCTGC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCCGCCACGAACTCGGTaGTGCCCCCGTACTGGCCGC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCPPRTR*CPRTGR
Trigger: GCGGCCAGTACGGGGGCATCACCGAGTTCGTGGCGG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGGTGCCGAAGCCGTGTaGATGGTAGTGCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQGAEAV*MVVPPG
Trigger: TCCAGGTGGCACTACCATTCACACGGCTTCGGCACC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp TGGTGTGGCAGGTCAATGCTGGCTTTATCGGGCTTGCTTCCGGAGGAGATAAAACAAGGTTCACTGAACTaGCTCCCGACTAGACTAGTT +
Preference number: 4 (lower is better)
Translates to: WCGRSMLALSGLLPEEIKQGSLN*LPTRLV
Trigger: AACTAGTCTAGTCGGGAGTCAGTTCAGTGAACCTTG...TTTTATCTCCTCCGGAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp TGGTGTGGCAGGTCAATGCTGGCTTTATCGGGCTTGCTTCCGGAGGAGATAAAAAATCTGGGATGGGTATaGCAGCACCAGCATAACACT +
Preference number: 4 (lower is better)
Translates to: WCGRSMLALSGLLPEEIKNLGWV*QHQHNT
Trigger: AGTGTTATGCTGGTGCTGTCATACCCATCCCAGATT...TTTTATCTCCTCCGGAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCACACCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTATGCCCTGTCCGGGCTaGTGCGGGAAGGCGCGACCG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCMPCPG*CGKARP
Trigger: CGGTCGCGCCTTCCCGCAGCAGCCCGGACAGGGCAT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTCCCGGGCACACTCATaGCCCGGCAGGCCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSRAHS*PGRPRL
Trigger: CAGCCTAGGCCTGCCGGGGCATGAGTGTGCCCGGGA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGTGATGCCCCCGTACTaGCCGCTGGCGAACTTCTCT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQVMPPY*PLANFS
Trigger: AGAGAAGTTCGCCAGCGGCCAGTACGGGGGCATCAC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp GCTACTTGGCAGTGGAGGATTACTGGGGCAAATGGCAGAAACCAAAGATGTCTTGTGGCAGGTCAATGCTaGCTTTATCGGGCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: ATWQWRITGANGRNQRCLVAGQC*LYRACF
Trigger: GAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCAC...AAGACATCTTTGGTTTCTGCCATTTGCCCCAGTAATCCTCCACTGCCAAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp AGCCGTGTGAATGGTAGTGCCACCTGGAGCAGAACTGTAACTGGGGGTTTTTACGAAATCCCTGGTGAATaGAACTGGAGTGAAGTCCGA +
Preference number: 4 (lower is better)
Translates to: SRVNGSATWSRTVTGGFYEIPGE*NWSEVR
Trigger: TCGGACTTCACTCCAGTTCCATTCACCAGGGATTTC...GTAAAAACCCCCAGTTACAGTTCTGCTCCAGGTGGCACTACCATTCACACGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp AAGATGCAGCTCTGTCAGGCTTCTCTAAGCCCGACGACTGAAAAGCAGGGAAGATGTTGGTACAGGAGGTaGAACAGGAACCTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: KMQLCQASLSPTTEKQGRCWYRR*NRNLSS
Trigger: ACTGCTAAGGTTCCTGTTCCACCTCCTGTACCAACA...TCTTCCCTGCTTTTCAGTCGTCGGGCTTAGAGAAGCCTGACAGAGCTGCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAGCCGCTCGAGGTGCTaGGGGACGCGTGAGCGCGAG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCSRSRC*GTRERE
Trigger: CTCGCGCTCACGCGTCCCCCAGCACCTCGAGCGGCT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399933.8
3UTR CAA 72 bp CTGGGCAAGGAGAATGTGGCTGCTGAAACTGCATTCTaGGCTTTTCCTGCCTCACTCTGGCTAGTCTTAACT +
Preference number: 4 (lower is better)
Translates to: LGKENVAAETAF*AFPASLWLVLT
Trigger: AGTTAAGACTAGCCAGAGTGAGGCAGGAAAAGCCAAGAATGCAGTTTCAGCAGCCACATTCTCCTTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp TGGTGTGGCAGGTCAATGCTGGCTTTATCGGGCTTGCTTCCGGAGGAGATAAAAAGAAATGCCTGCAGCTaGGGAGCAAAAGTGAAAACT +
Preference number: 4 (lower is better)
Translates to: WCGRSMLALSGLLPEEIKRNACS*GAKVKT
Trigger: AGTTTTCACTTTTGCTCCTCAGCTGCAGGCATTTCT...TTTTATCTCCTCCGGAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCACACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AAGATGCAGCTCTGTCAGGCTTCTCTAAGCCCGACGACTGAAAAGCAGGGAAGACCGTTAATCATAATCTaGGTACCAGGTGCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: KMQLCQASLSPTTEKQGRPLIII*VPGAKG
Trigger: ACCTTTGGCACCTGGTACTCAGATTATGATTAACGG...TCTTCCCTGCTTTTCAGTCGTCGGGCTTAGAGAAGCCTGACAGAGCTGCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AGGGTGCTCTCATTTCTCTGTGGAAAAGGCTCTCCTCACAGAGTTCCTCAGACAGCTCACTGGACTTGTTaGAAGGGACGACAATTCAGT +
Preference number: 4 (lower is better)
Translates to: RVLSFLCGKGSPHRVPQTAHWTC*KGRQFS
Trigger: ACTGAATTGTCGTCCCTTTCAACAAGTCCAGTGAGC...TGTCTGAGGAACTCTGTGAGGAGAGCCTTTTCCACAGAGAAATGAGAGCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR TCA 90 bp CTGTGTAACATCAGAAGCATGACGCCTACAGGAAGATGGCCTCGAGAAAGTCTTGTAACATCAGAAGCATaGCGCCTACAGGAAGATGGC +
Preference number: 4 (lower is better)
Translates to: LCNIRSMTPTGRWPRESLVTSEA*RLQEDG
Trigger: GCCATCTTCCTGTAGGCGTCATGCTTCTGATGTTAC...AAGACTTTCTCGAGGCCATCTTCCTGTAGGCGTCATGCTTCTGATGTTACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR TCA 90 bp TTCAGAGCGATACTGAGGGTGCTCTCATTTCTCTGTGGAAAAGGCTCTCCTCACAAGGGCTGTGTACAGTaGGTAAGCCCTTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: FRAILRVLSFLCGKGSPHKGCVQ*VSPFLS
Trigger: TGACAAGAAAGGGCTTACTCACTGTACACAGCCCTT...GTGAGGAGAGCCTTTTCCACAGAGAAATGAGAGCACCCTCAGTATCGCTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR GCA 90 bp AGATTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGAGGCCCAAATCACCACTaGCAGTGGTGTGGCCTAATG +
Preference number: 4 (lower is better)
Translates to: RLSFRNRYRTCGSWYCCRGPNHH*QWCGLM
Trigger: CATTAGGCCACACCACTGGCAGTGGTGATTTGGGCC...TCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp TTCTTGTCAGCAAACCTTCATCAAGTCTTCAGAGCGATACTGAGGGTGCTCTCATGTGGCTCCTGGTACTaGTGCCGAATGTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: FLSANLHQVFRAILRVLSCGSWY*CRMWNC
Trigger: ACAGTTCCACATTCGGCAGCAGTACCAGGAGCCACA...TGAGAGCACCCTCAGTATCGCTCTGAAGACTTGATGAAGGTTTGCTGACAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAACAGCCGCTCGAGGTaGTGGGGGACGCGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCNSRSR*WGTRER
Trigger: GCGCTCACGCGTCCCCCAGCACCTCGAGCGGCTGTT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGAGGCACTCCTTCCGTaGGCCGGCCCTGAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCEALLP*AGPEVW
Trigger: CCAGACCTCAGGGCCGGCCCACGGAAGGAGTGCCTC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTGTTTGGAGATCCAGTaGTCCACTCCGTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQCLEIQ*STPCRR
Trigger: CCGCCTGCACGGAGTGGACCACTGGATCTCCAAACA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp TGGTGTGGCAGGTCAATGCTGGCTTTATCGGGCTTGCTTCCGGAGGAGATAAAAAAGGACCTTTTGTATTaGTGTGGCAGGTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: WCGRSMLALSGLLPEEIKKDLLY*CGRSML
Trigger: CAGCATTGACCTGCCACACCAATACAAAAGGTCCTT...TTTTATCTCCTCCGGAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCACACCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGGACCTGTGGAGGAAATaGTCGGTGAAGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: AETPVDVSAGVILIAVPLDLWRK*SVKHWA
Trigger: TGCCCAGTGCTTCACCGACCATTTCCTCCACAGGTC...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp TTCAGAGCGATACTGAGGGTGCTCTCATTTCTCTGTGGAAAAGGCTCTCCTCACGAAATCCCTGGTGAATaGAACTGGAGTGAAGTCCGA +
Preference number: 4 (lower is better)
Translates to: FRAILRVLSFLCGKGSPHEIPGE*NWSEVR
Trigger: TCGGACTTCACTCCAGTTCCATTCACCAGGGATTTC...GTGAGGAGAGCCTTTTCCACAGAGAAATGAGAGCACCCTCAGTATCGCTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCTAGGCTGGGCGGTGTaGAACAGCCGCTCGAGGTGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNLGWAV*NSRSRC
Trigger: GCACCTCGAGCGGCTGTTCCACACCGCCCAGCCTAG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399933.8
CDS-3UTR CCA 90 bp GCTCTCATTTCTCTGTGGAAAAGGCTCTCCTCACAGAGTTCCTCAGACAGTGTCGCTCTCATTTCTCTGTaGAAAAGGCTCTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: ALISLWKRLSSQSSSDSVALISL*KRLSSQ
Trigger: CTGTGAGGAGAGCCTTTTCCACAGAGAAATGAGAGC...GACACTGTCTGAGGAACTCTGTGAGGAGAGCCTTTTCCACAGAGAAATGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR CCA 90 bp CATAAGTTTCTGAACTGGAGTCCCACTGATTACATCTCCATTTGTTGCTGCTGTACACTGGCTGGAGTGTaGCAAGGAGAGGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: HKFLNWSPTDYISICCCCTLAGV*QGEGVG
Trigger: GCCAACTCCCTCTCCTTGCCACACTCCAGCCAGTGT...ACAGCAGCAACAAATGGAGATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp TTCTGGGCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCAGCATAACACTGGCTaGAGTGTGGCAAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: FWAETPVDVSAGVILIAVQHNTG*SVARRG
Trigger: CCCTCTCCTTGCCACACTCCAGCCAGTGTTATGCTG...AACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGCCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CAA 72 bp TATTGGTGTGGCAGGTCAATGCTGGCTTTATCGGGCTaGCTTCCGGAGGAGATAAAACTGGTTTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: YWCGRSMLALSG*LPEEIKLVFPQ
Trigger: CTGTGGAAAAACCAGTTTTATCTCCTCCGGAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCACACCAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AGATTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGAGTTGATGACAGAGGCTaGCCTGTGGAGGAAATGGTC +
Preference number: 4 (lower is better)
Translates to: RLSFRNRYRTCGSWYCCRVDDRG*PVEEMV
Trigger: GACCATTTCCTCCACAGGTCAGCCTCTGTCATCAAC...TCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AAGATGCAGCTCTGTCAGGCTTCTCTAAGCCCGACGACTGAAAAGCAGGGAAGAGTTGTGCAAAACAGTTaGAGGAACTACCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: KMQLCQASLSPTTEKQGRVVQNS*RNYQDL
Trigger: CAAATCCTGGTAGTTCCTTCAACTGTTTTGCACAAC...TCTTCCCTGCTTTTCAGTCGTCGGGCTTAGAGAAGCCTGACAGAGCTGCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCCCCGGTGCTTCTCCTaGAGGAACTCGCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNPRCFS*RNSPRM
Trigger: CATCCTGGGCGAGTTCCTGCAGGAGAAGCACCGGGG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGGTGTGGCAGGTCAATaGTGGCTTTATCGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQGVAGQ*WLYRAC
Trigger: GCAAGCCCGATAAAGCCAGCATTGACCTGCCACACC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGGCCCAAATCACCACTaGCAGTGGTGTGGCCTAATG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQGPNHH*QWCGLM
Trigger: CATTAGGCCACACCACTGGCAGTGGTGATTTGGGCC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AAGATGCAGCTCTGTCAGGCTTCTCTAAGCCCGACGACTGAAAAGCAGGGAAGAGCTGTATTTGGTAGTTaGGTAGAAACAGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: KMQLCQASLSPTTEKQGRAVFGS*VETVPG
Trigger: ACCAGGAACTGTTTCTACCCAACTACCAAATACAGC...TCTTCCCTGCTTTTCAGTCGTCGGGCTTAGAGAAGCCTGACAGAGCTGCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTGGTCGGTGAAGCACTaGGCAAGGAGAATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQWSVKH*ARRMWL
Trigger: CAGCCACATTCTCCTTGCCCAGTGCTTCACCGACCA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGACCTGTGGAGGAAATaGTCGGTGAAGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQDLWRK*SVKHWA
Trigger: TGCCCAGTGCTTCACCGACCATTTCCTCCACAGGTC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAGAACGTGTGGCTCCTaGTACTGCTGCCGAATGTGG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQRTCGS*YCCRMW
Trigger: CCACATTCGGCAGCAGTACCAGGAGCCACACGTTCT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CAGAAGCATGACGCCTACAGGAAGATGGCCTCGAGAAAGTCTTGGAAAGAAGCAGCCTCGAGAAAGTCTTaGAAAGAAGCACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QKHDAYRKMASRKSWKEAASRKS*KEALSA
Trigger: AGCAGAAAGTGCTTCTTTCCAAGACTTTCTCGAGGC...TGCTTCTTTCCAAGACTTTCTCGAGGCCATCTTCCTGTAGGCGTCATGCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR CCA 90 bp CCTACAGGAAGATGGCCTCGAGAAAGTCTTGGAAAGAAGCACTTTCTGCTATCAACGCCTACAGGAAGATaGCCTCGAGAAAGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: PTGRWPRESLGKKHFLLSTPTGR*PRESLG
Trigger: TCCAAGACTTTCTCGAGGCCATCTTCCTGTAGGCGT...TGATAGCAGAAAGTGCTTCTTTCCAAGACTTTCTCGAGGCCATCTTCCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTCCATCTCTTCCTCCTaGTCGTCCGCGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSISSS*SSASSS
Trigger: GCTGGAGGACGCGGACGATCAGGAGGAAGAGATGGA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGTTGATGACAGAGGCTaGCCTGTGGAGGAAATGGTC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQVDDRG*PVEEMV
Trigger: GACCATTTCCTCCACAGGTCAGCCTCTGTCATCAAC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGCCGTGTGAATGGTAGTGCCACCTGGAGCAGAACTGTAACTGGGGGTTTTTACAGATACAGTATTGGGTaGATTTTGATCTGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SRVNGSATWSRTVTGGFYRYSIG*ILIWVG
Trigger: ACCAACCCAGATCAAAATTCACCCAATACTGTATCT...GTAAAAACCCCCAGTTACAGTTCTGCTCCAGGTGGCACTACCATTCACACGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AGGGTGCTCTCATTTCTCTGTGGAAAAGGCTCTCCTCACAGAGTTCCTCAGACAATTTGCTCCGGTAACTaGAAGCACATTTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: RVLSFLCGKGSPHRVPQTICSGN*KHIYCS
Trigger: AGAGCAGTAAATGTGCTTTCAGTTACCGGAGCAAAT...TGTCTGAGGAACTCTGTGAGGAGAGCCTTTTCCACAGAGAAATGAGAGCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCCCCGGTGCTTCTCCTaGAGGAACTCGCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCPRCFS*RNSPRM
Trigger: CATCCTGGGCGAGTTCCTGCAGGAGAAGCACCGGGG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTCTGCAGCAGACACATaGCCTGTCCGGGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCSAADT*PVRAAA
Trigger: CGCAGCAGCCCGGACAGGGCATGTGTCTGCTGCAGA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTTTCTGCCTCAGCGCTaGTTCCCAGGTCCTATAAGG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQFLPQR*FPGPIR
Trigger: CCTTATAGGACCTGGGAAGCAGCGCTGAGGCAGAAA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGCACTGTTGTACTTTCTaGCTCAGCGCTGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQHCCTF*LSAASQ
Trigger: CTGGGAAGCAGCGCTGAGGCAGAAAGTACAACAGTG...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AAGATGCAGCTCTGTCAGGCTTCTCTAAGCCCGACGACTGAAAAGCAGGGAAGAGAGAAAGCTCTTTTGTaGTGTCATCCACATAATCAG +
Preference number: 4 (lower is better)
Translates to: KMQLCQASLSPTTEKQGREKALL*CHPHNQ
Trigger: CTGATTATGTGGATGACAGCACAAAAGAGCTTTCTC...TCTTCCCTGCTTTTCAGTCGTCGGGCTTAGAGAAGCCTGACAGAGCTGCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp TTAATTACTGAAGTCAGTGATACTGTTGGTACAGGAGGTGGAACAGGAACCTTAGGTGTGGCAGGTCAATaGTGGCTTTATCGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: LITEVSDTVGTGGGTGTLGVAGQ*WLYRAC
Trigger: GCAAGCCCGATAAAGCCAGCATTGACCTGCCACACC...TAAGGTTCCTGTTCCACCTCCTGTACCAACAGTATCACTGACTTCAGTAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGTGATGCCCCCGTACTaGCCGCTGGCGAACTTCTCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNVMPPY*PLANFS
Trigger: AGAGAAGTTCGCCAGCGGCCAGTACGGGGGCATCAC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp GCTACTTGGCAGTGGAGGATTACTGGGGCAAATGGCAGAAACCAAAGATGTCTTATTTTGAAGATCTATTaGCAACCACTGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: ATWQWRITGANGRNQRCLILKIY*QPLATG
Trigger: CCCTGTGGCCAGTGGTTGCCAATAGATCTTCAAAAT...AAGACATCTTTGGTTTCTGCCATTTGCCCCAGTAATCCTCCACTGCCAAGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp TTAGGAGACACTACTGGTTGTGTAGTTGAAATCAGAACAGATGATGCAAGGTGTTGGTCGGTGAAGCACTaGGCAAGGAGAATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LGDTTGCVVEIRTDDARCWSVKH*ARRMWL
Trigger: CAGCCACATTCTCCTTGCCCAGTGCTTCACCGACCA...ACACCTTGCATCATCTGTTCTGATTTCAACTACACAACCAGTAGTGTCTCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp TTAATTACTGAAGTCAGTGATACTGTTGGTACAGGAGGTGGAACAGGAACCTTAAGAACGTGTGGCTCCTaGTACTGCTGCCGAATGTGG +
Preference number: 4 (lower is better)
Translates to: LITEVSDTVGTGGGTGTLRTCGS*YCCRMW
Trigger: CCACATTCGGCAGCAGTACCAGGAGCCACACGTTCT...TAAGGTTCCTGTTCCACCTCCTGTACCAACAGTATCACTGACTTCAGTAATTAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp AGATTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGAGCAGTGGAGGATTACTaGGGCAAATGGCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: RLSFRNRYRTCGSWYCCRAVEDY*GKWQKP
Trigger: TGGTTTCTGCCATTTGCCCCAGTAATCCTCCACTGC...TCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CATAAGTTTCTGAACTGGAGTCCCACTGATTACATCTCCATTTGTTGCTGCTGTGCAAGGAGAGGGAGTTaGCAATCTACTGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: HKFLNWSPTDYISICCCCARRGS*QSTDAG
Trigger: CCCAGCATCAGTAGATTGCCAACTCCCTCTCCTTGC...ACAGCAGCAACAAATGGAGATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CAA 72 bp CACCATAGGCTGCACCTGAATCTTTACAGAGCTATTTaGAAGATCTATTGGCAACCACTGGCCACAGGGCAT +
Preference number: 4 (lower is better)
Translates to: HHRLHLNLYRAI*KIYWQPLATGH
Trigger: ATGCCCTGTGGCCAGTGGTTGCCAATAGATCTTCAAAATAGCTCTGTAAAGATTCAGGTGCAGCCTATGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTCTCCAGCATCAACCTaGAGTCCGCCACGAACTCGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSPAST*SPPRTR
Trigger: CCGAGTTCGTGGCGGACTTCAGGTTGATGCTGGAGA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp GGTGTTAATAAGTTACTTACAGAGGTTACAGGCGACAAAGGCTGTGGTCTAGCATTTGCAAGCAAAGCCTaGATGGGTTTGGTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: GVNKLLTEVTGDKGCGLAFASKA*MGLVPF
Trigger: GAAAGGGACCAAACCCATTCAGGCTTTGCTTGCAAA...TGCTAGACCACAGCCTTTGTCGCCTGTAACCTCTGTAAGTAACTTATTAACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp TTCTGGGCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTTGCTGCTGTTGCTTCTaGCCTTGTAACAGGGTAACT +
Preference number: 4 (lower is better)
Translates to: FWAETPVDVSAGVILIAVCCCCF*PCNRVT
Trigger: AGTTACCCTGTTACAAGGTCAGAAGCAACAGCAGCA...AACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGCCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGGTGCCGAAGCCGTGTaGATGGTAGTGCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCGAEAV*MVVPPG
Trigger: TCCAGGTGGCACTACCATTCACACGGCTTCGGCACC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp GTTTGGCTAAAAGGTGAAAGACTAGATGTAGTAGTTGTTCCAGCTACAGGTGAATCTAAGCCCGACGACTaGAAAGCAGGGAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: VWLKGERLDVVVVPATGESKPDD*KAGKTD
Trigger: GTCTGTCTTCCCTGCTTTTCAGTCGTCGGGCTTAGA...TTCACCTGTAGCTGGAACAACTACTACATCTAGTCTTTCACCTTTTAGCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGGAGTTGGCAATCTACTaGTGCTGGGGACATTGGATA +
Preference number: 4 (lower is better)
Translates to: AETPVDVSAGVILIAVPLELAIY*CWGHWI
Trigger: TATCCAATGTCCCCAGCATCAGTAGATTGCCAACTC...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTCAGCTCCTGCTCCTTaGAGCAACCGCCTCCGATCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSAPAP*SNRLRS
Trigger: TGATCGGAGGCGGTTGCTGCAAGGAGCAGGAGCTGA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAGAAGCGCTAACTTCTaGTCCAGCATCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQRSANF*SSIISS
Trigger: GCTGGAGATGATGCTGGAGCAGAAGTTAGCGCTTCT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCCCCGTACTGGCCGCTaGCGAACTTCTCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNPRTGR*RTSLPS
Trigger: AGATGGAAGAGAAGTTCGCCAGCGGCCAGTACGGGG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGCCACTGCCAGTGGTGTaGCCTAATGTAAGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: AETPVDVSAGVILIAVPLPLPVV*PNVSLR
Trigger: TCTCAAACTTACATTAGGCCACACCACTGGCAGTGG...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp AAGATGCAGCTCTGTCAGGCTTCTCTAAGCCCGACGACTGAAAAGCAGGGAAGATATTTGGGGTTGCTCTaGAGTCTTAACATATGCTTT +
Preference number: 4 (lower is better)
Translates to: KMQLCQASLSPTTEKQGRYLGLL*SLNICF
Trigger: AAAGCATATGTTAAGACTCCAGAGCAACCCCAAATA...TCTTCCCTGCTTTTCAGTCGTCGGGCTTAGAGAAGCCTGACAGAGCTGCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp TTCTGGGCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTAGCTCCAAGACCTTGTaGTGGAACAATAAACCGGGT +
Preference number: 4 (lower is better)
Translates to: FWAETPVDVSAGVILIAVSSKTL*WNNKPG
Trigger: ACCCGGTTTATTGTTCCACCACAAGGTCTTGGAGCT...AACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGCCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CAA 72 bp AGATATAAGGAGAACATGGCTGCCAGCTCCAAGACCTaGTGGTGGAACAATAAACCGGGTTCCGTTAATCAT +
Preference number: 4 (lower is better)
Translates to: RYKENMAASSKT*WWNNKPGSVNH
Trigger: ATGATTAACGGAACCCGGTTTATTGTTCCACCACAAGGTCTTGGAGCTGGCAGCCATGTTCTCCTTATATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTTTGCAAGCAAAGCCTaGATGGGTTTGGTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQFASKA*MGLVPF
Trigger: GAAAGGGACCAAACCCATTCAGGCTTTGCTTGCAAA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGGAGAATGTGGCTGCTaGAACTGCATTCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQGECGC*NCILGF
Trigger: AAAGCCAAGAATGCAGTTTCAGCAGCCACATTCTCC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGTGTTCCAGCTACAGGTaGAAAAGCAGAGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: AETPVDVSAGVILIAVPLCSSYR*KSRGRS
Trigger: ACTTCTTCCTCTGCTTTTTCACCTGTAGCTGGAACA...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTGCTGCTGTTGCTTCTaGCCTTGTAACAGGGTAACT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQCCCCF*PCNRVT
Trigger: AGTTACCCTGTTACAAGGTCAGAAGCAACAGCAGCA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGATTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGAGAACTGGAGTCCCACTaGTTACATCTCCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: RLSFRNRYRTCGSWYCCRELESH*LHLHLL
Trigger: CAACAAATGGAGATGTAATCAGTGGGACTCCAGTTC...TCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CTCCTGTTTCTTTGGAAAGCCTTCATTAACTTTGGTTCCCATGGCAGCAATTCAAACAAGAGTTGGGGTTaGTGTACCACTAGGAACTGG +
Preference number: 4 (lower is better)
Translates to: LLFLWKAFINFGSHGSNSNKSWG*CTTRNW
Trigger: CCAGTTCCTAGTGGTACATCAACCCCAACTCTTGTT...TGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCCAAAGAAACAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp TTTCTTGTCAGCAAACCTTCATCAAGTCTTCAGAGCGATACTGAGGGTGCTCTCAGGTATCATTTCCACTaGCTAAAACAGGAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: FLVSKPSSSLQSDTEGALRYHFH*LKQEVV
Trigger: CACAACCTCCTGTTTTAGTCAGTGGAAATGATACCT...GAGAGCACCCTCAGTATCGCTCTGAAGACTTGATGAAGGTTTGCTGACAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR TCA 90 bp TTTCTTGTCAGCAAACCTTCATCAAGTCTTCAGAGCGATACTGAGGGTGCTCTCTCCTGTTTTCACAGTTaGTATAGCCACAGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: FLVSKPSSSLQSDTEGALSCFHS*YSHSVS
Trigger: GGAAACACTGTGGCTATATCAACTGTGAAAACAGGA...GAGAGCACCCTCAGTATCGCTCTGAAGACTTGATGAAGGTTTGCTGACAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGCAAGGTTCACTGAACTaGCTCCCGACTAGACTAGTT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQQGSLN*LPTRLV
Trigger: AACTAGTCTAGTCGGGAGTCAGTTCAGTGAACCTTG...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGAATACAAGGTTCACTaGACTGACTCCCGACTAGAC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQEYKVH*TDSRLD
Trigger: GTCTAGTCGGGAGTCAGTTCAGTGAACCTTGTATTC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGTCCAAATGAAACACTaGAGTGCTACTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQVQMKH*SATWQW
Trigger: CCACTGCCAAGTAGCACTTCAGTGTTTCATTTGGAC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTCAGCTCCTGCTCCTTaGAGCAACCGCCTCCGATCA +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCSAPAP*SNRLRS
Trigger: TGATCGGAGGCGGTTGCTGCAAGGAGCAGGAGCTGA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp TTCTGGGCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTATTCTTGGCTTTTCCTaGCTCACTCTGGCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: FWAETPVDVSAGVILIAVILGFS*LTLASL
Trigger: AAGACTAGCCAGAGTGAGGCAGGAAAAGCCAAGAAT...AACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGGCCCAAATCACCACTaGCAGTGGTGTGGCCTAATG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNGPNHH*QWCGLM
Trigger: CATTAGGCCACACCACTGGCAGTGGTGATTTGGGCC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCAGGCTCCTGGTACTGCTaGCGAATGTGGAACTGTGTT +
Preference number: 4 (lower is better)
Translates to: DSQNLSLLELNYHLLTMAGSWYC*RMWNCV
Trigger: AACACAGTTCCACATTCGGCAGCAGTACCAGGAGCC...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAGTTACATTGGATGGTaGCGAAGCCGTGTGAATGGT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQSYIGW*RSRVNG
Trigger: ACCATTCACACGGCTTCGGCACCATCCAATGTAACT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTGTTTGGAGATCCAGTaGTCCACTCCGTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCCLEIQ*STPCRR
Trigger: CCGCCTGCACGGAGTGGACCACTGGATCTCCAAACA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGCTTCTGGCCCTGTTTaGAGATCCAGTGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNASGPV*RSSGPL
Trigger: GAGTGGACCACTGGATCTCCAAACAGGGCCAGAAGC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTGGGGCAAAGCTAGCTaGAATGGAAACAGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQWGKAS*NGNRSW
Trigger: CCAACTTCTGTTTCCATTCCAGCTAGCTTTGCCCCA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAGAACGTGTGGCTCCTaGTACTGCTGCCGAATGTGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNRTCGS*YCCRMW
Trigger: CCACATTCGGCAGCAGTACCAGGAGCCACACGTTCT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGAAATCCCTGGTGAATaGAACTGGAGTGAAGTCCGA +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQEIPGE*NWSEVR
Trigger: TCGGACTTCACTCCAGTTCCATTCACCAGGGATTTC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp GGTGTTAATAAGTTACTTACAGAGGTTACAGGCGACAAAGGCTGTGGTCTAGCAACTAGTTACATTGGATaGTGCCGAAGCCGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: GVNKLLTEVTGDKGCGLATSYIG*CRSRVN
Trigger: ATTCACACGGCTTCGGCACCATCCAATGTAACTAGT...TGCTAGACCACAGCCTTTGTCGCCTGTAACCTCTGTAAGTAACTTATTAACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CTCCTGTTTCTTTGGAAAGCCTTCATTAACTTTGGTTCCCATGGCAGCAATTCATCCAAGACCTTGTGGTaGAACAATAAACCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LLFLWKAFINFGSHGSNSSKTLW*NNKPGS
Trigger: GGAACCCGGTTTATTGTTCCACCACAAGGTCTTGGA...TGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCCAAAGAAACAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAGCTCCAAGACCTTGTaGTGGAACAATAAACCGGGT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQSSKTL*WNNKPG
Trigger: ACCCGGTTTATTGTTCCACCACAAGGTCTTGGAGCT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTGTTGGTACAGGAGGTaGAACAGGAACCTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQCWYRR*NRNLSS
Trigger: ACTGCTAAGGTTCCTGTTCCACCTCCTGTACCAACA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGACGCAGGACTTCGACTaGCAGATACAACAATCTGAG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQTQDFD*QIQQSE
Trigger: CTCAGATTGTTGTATCTGCCAGTCGAAGTCCTGCGT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
3UTR CAA 72 bp TGTGCCCACTGTAGACGGAATCAGTACTATTTGGGGTaGCTCTGGAGTCTTAACATATGCTTTATGCAATGG +
Preference number: 4 (lower is better)
Translates to: CAHCRRNQYYLG*LWSLNICFMQW
Trigger: CCATTGCATAAAGCATATGTTAAGACTCCAGAGCAACCCCAAATAGTACTGATTCCGTCTACAGTGGGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGCAAGTTGGAGCTGCTTaGGCTAGAAGTTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQQVGAA*ARSFLS
Trigger: GGAAAGAAAACTTCTAGCTCAAGCAGCTCCAACTTG...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGTTGATGACAGAGGCTaGCCTGTGGAGGAAATGGTC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNVDDRG*PVEEMV
Trigger: GACCATTTCCTCCACAGGTCAGCCTCTGTCATCAAC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp GGTGTTAATAAGTTACTTACAGAGGTTACAGGCGACAAAGGCTGTGGTCTAGCAGTATTGGGTGAATTTTaGTCTGGGTTGGTCTGTACT +
Preference number: 4 (lower is better)
Translates to: GVNKLLTEVTGDKGCGLAVLGEF*SGLVCT
Trigger: AGTACAGACCAACCCAGATCAAAATTCACCCAATAC...TGCTAGACCACAGCCTTTGTCGCCTGTAACCTCTGTAAGTAACTTATTAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTGTTCCAGCTACAGGTaGAAAAGCAGAGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQCSSYR*KSRGRS
Trigger: ACTTCTTCCTCTGCTTTTTCACCTGTAGCTGGAACA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGATTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGAAGAAGAGGGCATGTGTaGAGTTTTATCTATCACGTG +
Preference number: 4 (lower is better)
Translates to: RLSFRNRYRTCGSWYCCRRRGHV*SFIYHV
Trigger: CACGTGATAGATAAAACTTCACACATGCCCTCTTCT...TCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGAACTGGAGTCCCACTaGTTACATCTCCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQELESH*LHLHLL
Trigger: CAACAAATGGAGATGTAATCAGTGGGACTCCAGTTC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGACCAGCATAAGTTTCTaGACTGGAGTCCCACTGATT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQTSISF*TGVPLI
Trigger: AATCAGTGGGACTCCAGTTCAGAAACTTATGCTGGT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGCCGTTAATCATAATCTaGGTACCAGGTGCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQPLIII*VPGAKG
Trigger: ACCTTTGGCACCTGGTACTCAGATTATGATTAACGG...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGACAGGTGGGTCCAAATaGAACACTGAAGTGCTACTT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQTGGSK*NTEVLL
Trigger: AAGTAGCACTTCAGTGTTTCATTTGGACCCACCTGT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CATAAGTTTCTGAACTGGAGTCCCACTGATTACATCTCCATTTGTTGCTGCTGTACAGGTGGGTCCAAATaGAACACTGAAGTGCTACTT +
Preference number: 4 (lower is better)
Translates to: HKFLNWSPTDYISICCCCTGGSK*NTEVLL
Trigger: AAGTAGCACTTCAGTGTTTCATTTGGACCCACCTGT...ACAGCAGCAACAAATGGAGATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTCTAAGCCCGACGACTaGAAAGCAGGGAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSKPDD*KAGKTD
Trigger: GTCTGTCTTCCCTGCTTTTCAGTCGTCGGGCTTAGA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGACAGCTTGCCTCCGATaGTACCATTTTCCCGATTTT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQTACLR*YHFPDF
Trigger: AAAATCGGGAAAATGGTATCATCGGAGGCAAGCTGT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399933.8
CDS-3UTR TCA 90 bp GTTTGGCTAAAAGGTGAAAGACTAGATGTAGTAGTTGTTCCAGCTACAGGTGAAACAGCTTGCCTCCGATaGTACCATTTTCCCTCACAA +
Preference number: 4 (lower is better)
Translates to: VWLKGERLDVVVVPATGETACLR*YHFPSQ
Trigger: TTGTGAGGGAAAATGGTATCATCGGAGGCAAGCTGT...TTCACCTGTAGCTGGAACAACTACTACATCTAGTCTTTCACCTTTTAGCCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTTCTGCCTCAGCGCTaGTTCCCAGGTCCTATAAGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNFLPQR*FPGPIR
Trigger: CCTTATAGGACCTGGGAAGCAGCGCTGAGGCAGAAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTCAGGATTTTCAGTTTaGCCTACAGCAGTGTACCAC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQSGFSV*PTAVYH
Trigger: GTGGTACACTGCTGTAGGGCAAACTGAAAATCCTGA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGGCTCCTGGTACTGCTaGCGAATGTGGAACTGTGTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNGSWYC*RMWNCV
Trigger: AACACAGTTCCACATTCGGCAGCAGTACCAGGAGCC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTGTGGCTCCTGGTACTaGTGCCGAATGTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNCGSWY*CRMWNC
Trigger: ACAGTTCCACATTCGGCAGCAGTACCAGGAGCCACA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AGATTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGAAGTCTAAATTCAAGATaGAGCTCTGTCAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RLSFRNRYRTCGSWYCCRSLNSR*SSVRLL
Trigger: GAGAAGCCTGACAGAGCTGCATCTTGAATTTAGACT...TCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp GGTGTTAATAAGTTACTTACAGAGGTTACAGGCGACAAAGGCTGTGGTCTAGCAAGAACAACTGCATTCTaGTACAGTAATCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: GVNKLLTEVTGDKGCGLARTTAF*YSNLGW
Trigger: CCATCCCAGATTACTGTAGCAGAATGCAGTTGTTCT...TGCTAGACCACAGCCTTTGTCGCCTGTAACCTCTGTAAGTAACTTATTAACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGCTTCTGGCCCTGTTTaGAGATCCAGTGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCASGPV*RSSGPL
Trigger: GAGTGGACCACTGGATCTCCAAACAGGGCCAGAAGC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAAGGTAGGTCTGCGATaGGGAGGACTTAATAGAGAA +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQKVGLR*GGLNRE
Trigger: TTCTCTATTAAGTCCTCCCCATCGCAGACCTACCTT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGCTTTGCCTTCTTCCTTaGAGAAAGCTCTTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: AETPVDVSAGVILIAVPLLCLLP*RKLFCA
Trigger: AGCACAAAAGAGCTTTCTCCAAGGAAGAAGGCAAAG...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CATAAGTTTCTGAACTGGAGTCCCACTGATTACATCTCCATTTGTTGCTGCTGTGAGCATTTCTACCTGTaGAAGGAGGCAGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: HKFLNWSPTDYISICCCCEHFYL*KEAVDL
Trigger: CAAATCAACTGCCTCCTTCCACAGGTAGAAATGCTC...ACAGCAGCAACAAATGGAGATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGTGGCAGGTCAATGCTaGCTTTATCGGGCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNVAGQC*LYRACF
Trigger: GAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCAC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGCCTTTTGTATTGGTGTaGCAGGTCAATGCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQPFVLV*QVNAGF
Trigger: AAAGCCAGCATTGACCTGCCACACCAATACAAAAGG...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGATTTTGAAGATCTATTaGCAACCACTGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQILKIY*QPLATG
Trigger: CCCTGTGGCCAGTGGTTGCCAATAGATCTTCAAAAT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGTTTCTGTTGAAGTGGTaGCACTTCTTTTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: AETPVDVSAGVILIAVPLFLLKW*HFFCNC
Trigger: GCAGTTGCAAAAGAAGTGCCACCACTTCAACAGAAA...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp TTCTGGGCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTACCTTTCTGTTGAAGTaGTGGCACTTCTTTTGCAAC +
Preference number: 4 (lower is better)
Translates to: FWAETPVDVSAGVILIAVTFLLK*WHFFCN
Trigger: GTTGCAAAAGAAGTGCCACCACTTCAACAGAAAGGT...AACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp TTCTGGGCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTAGGCGACAAAGGCTGTaGTCTAGCACTACTTATATT +
Preference number: 4 (lower is better)
Translates to: FWAETPVDVSAGVILIAVRRQRL*SSTTYI
Trigger: AATATAAGTAGTGCTAGACCACAGCCTTTGTCGCCT...AACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGCCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTGGTCGGTGAAGCACTaGGCAAGGAGAATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCWSVKH*ARRMWL
Trigger: CAGCCACATTCTCCTTGCCCAGTGCTTCACCGACCA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGACCTGTGGAGGAAATaGTCGGTGAAGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCDLWRK*SVKHWA
Trigger: TGCCCAGTGCTTCACCGACCATTTCCTCCACAGGTC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp GTTTGGCTAAAAGGTGAAAGACTAGATGTAGTAGTTGTTCCAGCTACAGGTGAAGATATAAGGAGAACATaGCTGCCAGCTCCAAGACCT +
Preference number: 4 (lower is better)
Translates to: VWLKGERLDVVVVPATGEDIRRT*LPAPRP
Trigger: AGGTCTTGGAGCTGGCAGCCATGTTCTCCTTATATC...TTCACCTGTAGCTGGAACAACTACTACATCTAGTCTTTCACCTTTTAGCCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp AGATTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGAGCTAGTGTGATCTTCTaGGCAGAGTTATCTATTGGT +
Preference number: 4 (lower is better)
Translates to: RLSFRNRYRTCGSWYCCRASVIF*AELSIG
Trigger: ACCAATAGATAACTCTGCCCAGAAGATCACACTAGC...TCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp GGTGTTAATAAGTTACTTACAGAGGTTACAGGCGACAAAGGCTGTGGTCTAGCAGATTACTGGGGCAAATaGCAGAAACCAAAGATGTCT +
Preference number: 4 (lower is better)
Translates to: GVNKLLTEVTGDKGCGLADYWGK*QKPKMS
Trigger: AGACATCTTTGGTTTCTGCCATTTGCCCCAGTAATC...TGCTAGACCACAGCCTTTGTCGCCTGTAACCTCTGTAAGTAACTTATTAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CAA 72 bp GGCGGCTCCTGTTTCTTTGGAAAGCCTTCATTAACTTaGGTTCCCATGGCAGCAATTCATTTAAAAGACGTA +
Preference number: 4 (lower is better)
Translates to: GGSCFFGKPSLT*VPMAAIHLKDV
Trigger: TACGTCTTTTAAATGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCCAAAGAAACAGGAGCCGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CAA 72 bp GGCATTTTGTATACCATTTGTAAAGGACCTTTTGTATaGGTGTGGCAGGTCAATGCTGGCTTTATCGGGCTT +
Preference number: 4 (lower is better)
Translates to: GILYTICKGPFV*VWQVNAGFIGL
Trigger: AAGCCCGATAAAGCCAGCATTGACCTGCCACACCAATACAAAAGGTCCTTTACAAATGGTATACAAAATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
3UTR CAA 72 bp TATTGGTGTGCCCACTGTAGACGGAATCAGTACTATTaGGGGTTGCTCTGGAGTCTTAACATATGCTTTATG +
Preference number: 4 (lower is better)
Translates to: YWCAHCRRNQYY*GLLWSLNICFM
Trigger: CATAAAGCATATGTTAAGACTCCAGAGCAACCCCAAATAGTACTGATTCCGTCTACAGTGGGCACACCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAGAAAAGCATTACACTaGGGCATCAGAAGACAACGT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQRKALH*GIRRQR
Trigger: ACGTTGTCTTCTGATGCCTCAGTGTAATGCTTTTCT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CATAAGTTTCTGAACTGGAGTCCCACTGATTACATCTCCATTTGTTGCTGCTGTCTCTGGTACAGTAGGTaGCTTTATGACAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: HKFLNWSPTDYISICCCCLWYSR*LYDSFP
Trigger: AGGAAAACTGTCATAAAGTCACCTACTGTACCAGAG...ACAGCAGCAACAAATGGAGATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp GTTGTGTTTATGAGTTGTGGTGATGTATGTACTGTGGGTATAGAACTTGCATTCGGAGAATGTGGCTGCTaGAACTGCATTCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: VVFMSCGDVCTVGIELAFGECGC*NCILGF
Trigger: AAAGCCAAGAATGCAGTTTCAGCAGCCACATTCTCC...GAATGCAAGTTCTATACCCACAGTACATACATCACCACAACTCATAAACACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGTTGTGCAAAACAGTTaGAGGAACTACCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQVVQNS*RNYQDL
Trigger: CAAATCCTGGTAGTTCCTTCAACTGTTTTGCACAAC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGTATTGGGTGAATTTTaGTCTGGGTTGGTCTGTACT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQVLGEF*SGLVCT
Trigger: AGTACAGACCAACCCAGATCAAAATTCACCCAATAC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGGCTGAGGAGCAAAAGTaGAAACTGAACTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: AETPVDVSAGVILIAVPLAEEQK*KLNLKI
Trigger: TATCTTCAAGTTCAGTTTTCACTTTTGCTCCTCAGC...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAGAGGAAGAAGTTGTTaGTTTTGGCACCAGAAATGC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQRGRSC*FWHQKC
Trigger: GCATTTCTGGTGCCAAAATCAACAACTTCTTCCTCT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAGAAGAGGGCATGTGTaGAGTTTTATCTATCACGTG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQRRGHV*SFIYHV
Trigger: CACGTGATAGATAAAACTTCACACATGCCCTCTTCT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGAAGAATAGATGGAGCTaGTACCAGCATAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: AETPVDVSAGVILIAVPLKNRWS*YQHKFL
Trigger: CAGAAACTTATGCTGGTATCAGCTCCATCTATTCTT...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTTCACATCCTTTATCTaGGACACAGCTGGTGATGAA +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQFTSFI*DTAGDE
Trigger: TTCATCACCAGCTGTGTCTCAGATAAAGGATGTGAA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGATTTGCTCCGGTAACTaGAAGCACATTTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQICSGN*KHIYCS
Trigger: AGAGCAGTAAATGTGCTTTCAGTTACCGGAGCAAAT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CATAAGTTTCTGAACTGGAGTCCCACTGATTACATCTCCATTTGTTGCTGCTGTATTTGCTCCGGTAACTaGAAGCACATTTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: HKFLNWSPTDYISICCCCICSGN*KHIYCS
Trigger: AGAGCAGTAAATGTGCTTTCAGTTACCGGAGCAAAT...ACAGCAGCAACAAATGGAGATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAGGTATCATTTCCACTaGCTAAAACAGGAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQRYHFH*LKQEVV
Trigger: CACAACCTCCTGTTTTAGTCAGTGGAAATGATACCT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTCCTGTTTTCACAGTTaGTATAGCCACAGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQSCFHS*YSHSVS
Trigger: GGAAACACTGTGGCTATATCAACTGTGAAAACAGGA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CTCCTGTTTCTTTGGAAAGCCTTCATTAACTTTGGTTCCCATGGCAGCAATTCATCCTGTTTTCACAGTTaGTATAGCCACAGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LLFLWKAFINFGSHGSNSSCFHS*YSHSVS
Trigger: GGAAACACTGTGGCTATATCAACTGTGAAAACAGGA...TGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCCAAAGAAACAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTTTACCTGGACTTGTTaGAAGGGACGACAATTCAGT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQFTWTC*KGRQFS
Trigger: ACTGAATTGTCGTCCCTTTCAACAAGTCCAGGTAAA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CTCCTGTTTCTTTGGAAAGCCTTCATTAACTTTGGTTCCCATGGCAGCAATTCATTTACCTGGACTTGTTaGAAGGGACGACAATTCAGT +
Preference number: 4 (lower is better)
Translates to: LLFLWKAFINFGSHGSNSFTWTC*KGRQFS
Trigger: ACTGAATTGTCGTCCCTTTCAACAAGTCCAGGTAAA...TGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCCAAAGAAACAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTCTATTGGTGTAGATTaGATGCCTTGGCCACTGTTA +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQSIGVD*MPWPLL
Trigger: TAACAGTGGCCAAGGCATTCAATCTACACCAATAGA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CATAAGTTTCTGAACTGGAGTCCCACTGATTACATCTCCATTTGTTGCTGCTGTTCTATTGGTGTAGATTaGATGCCTTGGCCACTGTTA +
Preference number: 4 (lower is better)
Translates to: HKFLNWSPTDYISICCCCSIGVD*MPWPLL
Trigger: TAACAGTGGCCAAGGCATTCAATCTACACCAATAGA...ACAGCAGCAACAAATGGAGATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTCTAAGCCCGACGACTaGAAAGCAGGGAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCSKPDD*KAGKTD
Trigger: GTCTGTCTTCCCTGCTTTTCAGTCGTCGGGCTTAGA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGCCTCAGAACAGTAAGTaGAATGGAACAGATCTTTCC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQPQNSK*NGTDLS
Trigger: GGAAAGATCTGTTCCATTTCACTTACTGTTCTGAGG...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp GGTGTTAATAAGTTACTTACAGAGGTTACAGGCGACAAAGGCTGTGGTCTAGCATTAGTGCAAATAAGCTaGAACTCTGGTACAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GVNKLLTEVTGDKGCGLALVQIS*NSGTVG
Trigger: ACCTACTGTACCAGAGTTTCAGCTTATTTGCACTAA...TGCTAGACCACAGCCTTTGTCGCCTGTAACCTCTGTAAGTAACTTATTAACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAGAAGCGCTAACTTCTaGTCCAGCATCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNRSANF*SSIISS
Trigger: GCTGGAGATGATGCTGGAGCAGAAGTTAGCGCTTCT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCACTGTTGTACTTTCTaGCTCAGCGCTGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCHCCTF*LSAASQ
Trigger: CTGGGAAGCAGCGCTGAGGCAGAAAGTACAACAGTG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp GGTGTTAATAAGTTACTTACAGAGGTTACAGGCGACAAAGGCTGTGGTCTAGCAATCAGCAGTCTGTTGTaGAAAACAGTTGAAGGAACT +
Preference number: 4 (lower is better)
Translates to: GVNKLLTEVTGDKGCGLAISSLL*KTVEGT
Trigger: AGTTCCTTCAACTGTTTTGCACAACAGACTGCTGAT...TGCTAGACCACAGCCTTTGTCGCCTGTAACCTCTGTAAGTAACTTATTAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGTGGAGTCTTAACATATaGTTTATGCAATGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AETPVDVSAGVILIAVPLWSLNI*FMQWRR
Trigger: CCTCCTCCATTGCATAAAGCATATGTTAAGACTCCA...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGGCTCCTGGTACTGCTaGCGAATGTGGAACTGTGTT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCGSWYC*RMWNCV
Trigger: AACACAGTTCCACATTCGGCAGCAGTACCAGGAGCC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCAAGTTACATTGGATGGTaGCGAAGCCGTGTGAATGGT +
Preference number: 4 (lower is better)
Translates to: DSQNLSLLELNYHLLTMASYIGW*RSRVNG
Trigger: ACCATTCACACGGCTTCGGCACCATCCAATGTAACT...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAATCTGAGTACCAGGTaGCAAAGGTGTACTGGTATT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQNLSTR*QRCTGI
Trigger: AATACCAGTACACCTTTGGCACCTGGTACTCAGATT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp GCTACTTGGCAGTGGAGGATTACTGGGGCAAATGGCAGAAACCAAAGATGTCTTTGTGGGTATAGAACTTaGATTCCCAAAAGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: ATWQWRITGANGRNQRCLCGYRT*IPKRVY
Trigger: ATAAACTCTTTTGGGAATGCAAGTTCTATACCCACA...AAGACATCTTTGGTTTCTGCCATTTGCCCCAGTAATCCTCCACTGCCAAGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAGTCTAAATTCAAGATaGAGCTCTGTCAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQSLNSR*SSVRLL
Trigger: GAGAAGCCTGACAGAGCTGCATCTTGAATTTAGACT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGTGGCAGTTAATTTCTaGATGATCACTGTGACTTCC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQVAVNF*MITVTS
Trigger: GGAAGTCACAGTGATCATCCAGAAATTAACTGCCAC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAGTTTGAGTTTCTTGTaGCTCTGTAGTGACTGCTCT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQSLSFL*LCSDCS
Trigger: AGAGCAGTCACTACAGAGCCACAAGAAACTCAAACT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGATTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGACGGCTCCTGTTTCTTTaGAAAGCCTTCATTAACTTT +
Preference number: 4 (lower is better)
Translates to: RLSFRNRYRTCGSWYCCRRLLFL*KAFINF
Trigger: AAAGTTAATGAAGGCTTTCCAAAGAAACAGGAGCCG...TCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCAGGTTTGGTCCCTTTCTaGAGAGTAGACACTGGTACT +
Preference number: 4 (lower is better)
Translates to: DSQNLSLLELNYHLLTMAGLVPF*RVDTGT
Trigger: AGTACCAGTGTCTACTCTCCAGAAAGGGACCAAACC...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGTGGCAGGTCAATGCTaGCTTTATCGGGCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCVAGQC*LYRACF
Trigger: GAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCAC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGACCTTTCTGTTGAAGTaGTGGCACTTCTTTTGCAAC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQTFLLK*WHFFCN
Trigger: GTTGCAAAAGAAGTGCCACCACTTCAACAGAAAGGT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAGGCGACAAAGGCTGTaGTCTAGCACTACTTATATT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQRRQRL*SSTTYI
Trigger: AATATAAGTAGTGCTAGACCACAGCCTTTGTCGCCT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp GGAAAGCCTTCATTAACTTTGGTTCCCATGGCAGCAATTCATTTAAAAGACGTATGGGCAAGGAGAATGTaGCTGCTGAAACTGCATTCT +
Preference number: 4 (lower is better)
Translates to: GKPSLTLVPMAAIHLKDVWARRM*LLKLHS
Trigger: AGAATGCAGTTTCAGCAGCCACATTCTCCTTGCCCA...TACGTCTTTTAAATGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp TTCTTAGAGGATGTTGTAGAGGTTGGCCACTTAAGGAATTATTTGATGCTAGTGTGGGGCAAAGCTAGCTaGAATGGAAACAGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: FLEDVVEVGHLRNYLMLVWGKAS*NGNRSW
Trigger: CCAACTTCTGTTTCCATTCCAGCTAGCTTTGCCCCA...CACTAGCATCAAATAATTCCTTAAGTGGCCAACCTCTACAACATCCTCTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp TTAATTACTGAAGTCAGTGATACTGTTGGTACAGGAGGTGGAACAGGAACCTTAGTTTTATCTATCACGTaGCCCAAATCACCACTGCCA +
Preference number: 4 (lower is better)
Translates to: LITEVSDTVGTGGGTGTLVLSIT*PKSPLP
Trigger: TGGCAGTGGTGATTTGGGCCACGTGATAGATAAAAC...TAAGGTTCCTGTTCCACCTCCTGTACCAACAGTATCACTGACTTCAGTAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp AGATTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGACATAAGTTTCTGAACTaGAGTCCCACTGATTACATC +
Preference number: 4 (lower is better)
Translates to: RLSFRNRYRTCGSWYCCRHKFLN*SPTDYI
Trigger: GATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG...TCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGGAGCAGAACTGTAACTaGGGGTTTTTACTAAAGCTT +
Preference number: 4 (lower is better)
Translates to: AETPVDVSAGVILIAVPLEQNCN*GFLLKL
Trigger: AAGCTTTAGTAAAAACCCCCAGTTACAGTTCTGCTC...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp AAGGAATTATTTGATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTAAATGGTAGTGCCACCTaGAGCAGAACTGTAACTGGG +
Preference number: 4 (lower is better)
Translates to: KELFDASVIFWAELSIGVNGSAT*SRTVTG
Trigger: CCCAGTTACAGTTCTGCTCCAGGTGGCACTACCATT...TACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATCAAATAATTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGATTACTGGGGCAAATaGCAGAAACCAAAGATGTCT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQDYWGK*QKPKMS
Trigger: AGACATCTTTGGTTTCTGCCATTTGCCCCAGTAATC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGCAGTGGAGGATTACTaGGGCAAATGGCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNAVEDY*GKWQKP
Trigger: TGGTTTCTGCCATTTGCCCCAGTAATCCTCCACTGC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp TTCTTAGAGGATGTTGTAGAGGTTGGCCACTTAAGGAATTATTTGATGCTAGTGACGCAGGACTTCGACTaGCAGATACAACAATCTGAG +
Preference number: 4 (lower is better)
Translates to: FLEDVVEVGHLRNYLMLVTQDFD*QIQQSE
Trigger: CTCAGATTGTTGTATCTGCCAGTCGAAGTCCTGCGT...CACTAGCATCAAATAATTCCTTAAGTGGCCAACCTCTACAACATCCTCTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp GGAAAGCCTTCATTAACTTTGGTTCCCATGGCAGCAATTCATTTAAAAGACGTATCTGCTACAGTAATCTaGGATGGGTATGACAGCACC +
Preference number: 4 (lower is better)
Translates to: GKPSLTLVPMAAIHLKDVSATVI*DGYDST
Trigger: GGTGCTGTCATACCCATCCCAGATTACTGTAGCAGA...TACGTCTTTTAAATGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTTCCTGCTCTTTCTTaGAGGAAGAGGGCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNFPALS*RKRAGY
Trigger: ATAGCCTGCCCTCTTCCTTCAAGAAAGAGCAGGAAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGATCCAGAGGTTCTGTTaGGTCTATAGACTTACTGAT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQIQRFC*VYRLTD
Trigger: ATCAGTAAGTCTATAGACTCAACAGAACCTCTGGAT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp TGTGGAACTGTGTTTATTATTTTAGGGGATGTAGTCGCAGGTGTAGGTAAGGCAATCCAGAGGTTCTGTTaGGTCTATAGACTTACTGAT +
Preference number: 4 (lower is better)
Translates to: CGTVFIILGDVVAGVGKAIQRFC*VYRLTD
Trigger: ATCAGTAAGTCTATAGACTCAACAGAACCTCTGGAT...TGCCTTACCTACACCTGCGACTACATCCCCTAAAATAATAAACACAGTTCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp GGTGTTAATAAGTTACTTACAGAGGTTACAGGCGACAAAGGCTGTGGTCTAGCATTTACAGAGCTATTTTaGAGATCTATTGGCAACCAC +
Preference number: 4 (lower is better)
Translates to: GVNKLLTEVTGDKGCGLAFTELF*RSIGNH
Trigger: GTGGTTGCCAATAGATCTTCAAAATAGCTCTGTAAA...TGCTAGACCACAGCCTTTGTCGCCTGTAACCTCTGTAAGTAACTTATTAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGGAGAATGTGGCTGCTaGAACTGCATTCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNGECGC*NCILGF
Trigger: AAAGCCAAGAATGCAGTTTCAGCAGCCACATTCTCC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGCTGAGGAGCAAAAGTaGAAACTGAACTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQAEEQK*KLNLKI
Trigger: TATCTTCAAGTTCAGTTTTCACTTTTGCTCCTCAGC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCAACCAGCATAAGTTTCTaGACTGGAGTCCCACTGATT +
Preference number: 4 (lower is better)
Translates to: DSQNLSLLELNYHLLTMATSISF*TGVPLI
Trigger: AATCAGTGGGACTCCAGTTCAGAAACTTATGCTGGT...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAACAAGAGTTGGGGTTaGTGTACCACTAGGAACTGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNNKSWG*CTTRNW
Trigger: CCAGTTCCTAGTGGTACATCAACCCCAACTCTTGTT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp GTTTGGCTAAAAGGTGAAAGACTAGATGTAGTAGTTGTTCCAGCTACAGGTGAATTCACATCCTTTATCTaGGACACAGCTGGTGATGAA +
Preference number: 4 (lower is better)
Translates to: VWLKGERLDVVVVPATGEFTSFI*DTAGDE
Trigger: TTCATCACCAGCTGTGTCTCAGATAAAGGATGTGAA...TTCACCTGTAGCTGGAACAACTACTACATCTAGTCTTTCACCTTTTAGCCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp AGATTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGATTTACTAAAGCTTGCTaGTTTGGCAGAGAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: RLSFRNRYRTCGSWYCCRFTKAC*FGREAK
Trigger: TTTTGCTTCTCTGCCAAATCAGCAAGCTTTAGTAAA...TCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGAATACAAGGTTCACTaGACTGACTCCCGACTAGAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNEYKVH*TDSRLD
Trigger: GTCTAGTCGGGAGTCAGTTCAGTGAACCTTGTATTC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AAGGAATTATTTGATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTAGAATACAAGGTTCACTaGACTGACTCCCGACTAGAC +
Preference number: 4 (lower is better)
Translates to: KELFDASVIFWAELSIGVEYKVH*TDSRLD
Trigger: GTCTAGTCGGGAGTCAGTTCAGTGAACCTTGTATTC...TACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATCAAATAATTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp TGTGGAACTGTGTTTATTATTTTAGGGGATGTAGTCGCAGGTGTAGGTAAGGCATATTTGATGCTAGTGTaGTCTTCTGGGCAGAGTTAT +
Preference number: 4 (lower is better)
Translates to: CGTVFIILGDVVAGVGKAYLMLV*SSGQSY
Trigger: ATAACTCTGCCCAGAAGATCACACTAGCATCAAATA...TGCCTTACCTACACCTGCGACTACATCCCCTAAAATAATAAACACAGTTCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGTCCAAATGAAACACTaGAGTGCTACTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNVQMKH*SATWQW
Trigger: CCACTGCCAAGTAGCACTTCAGTGTTTCATTTGGAC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AAGGAATTATTTGATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTAGTCCAAATGAAACACTaGAGTGCTACTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KELFDASVIFWAELSIGVVQMKH*SATWQW
Trigger: CCACTGCCAAGTAGCACTTCAGTGTTTCATTTGGAC...TACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATCAAATAATTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGCCTCTAGATGTAACTaGTATCGTTGTCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQASRCN*YRCLFS
Trigger: AGAGAAAAGACAACGATAGCAGTTACATCTAGAGGC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGAGAAAGCTCTTTTGTaGTGTCATCCACATAATCAG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQEKALL*CHPHNQ
Trigger: CTGATTATGTGGATGACAGCACAAAAGAGCTTTCTC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CATAAGTTTCTGAACTGGAGTCCCACTGATTACATCTCCATTTGTTGCTGCTGTCTGTTGTCTCATTTGTaGTTAACTTTGCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: HKFLNWSPTDYISICCCCLLSHL*LTLPSS
Trigger: GGAAGAAGGCAAAGTTAAGCACAAATGAGACAACAG...ACAGCAGCAACAAATGGAGATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGATCAGCAGTCTGTTGTaGAAAACAGTTGAAGGAACT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQISSLL*KTVEGT
Trigger: AGTTCCTTCAACTGTTTTGCACAACAGACTGCTGAT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTTTGGCACCAGAAATaGCTGCAGCTGAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNFWHQK*LQLRSK
Trigger: TTTGCTCCTCAGCTGCAGGCATTTCTGGTGCCAAAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AAGGAATTATTTGATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTATTTTGGCACCAGAAATaGCTGCAGCTGAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: KELFDASVIFWAELSIGVFWHQK*LQLRSK
Trigger: TTTGCTCCTCAGCTGCAGGCATTTCTGGTGCCAAAA...TACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATCAAATAATTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTGGAGTCTTAACATATaGTTTATGCAATGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQWSLNI*FMQWRR
Trigger: CCTCCTCCATTGCATAAAGCATATGTTAAGACTCCA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAGTTACATTGGATGGTaGCGAAGCCGTGTGAATGGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSYIGW*RSRVNG
Trigger: ACCATTCACACGGCTTCGGCACCATCCAATGTAACT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp TTAGGAGACACTACTGGTTGTGTAGTTGAAATCAGAACAGATGATGCAAGGTGTAATCTGAGTACCAGGTaGCAAAGGTGTACTGGTATT +
Preference number: 4 (lower is better)
Translates to: LGDTTGCVVEIRTDDARCNLSTR*QRCTGI
Trigger: AATACCAGTACACCTTTGGCACCTGGTACTCAGATT...ACACCTTGCATCATCTGTTCTGATTTCAACTACACAACCAGTAGTGTCTCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTATCATCTCCAGCTTCTaGCCCTGTTTGGAGATCCAG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCIISSF*PCLEIQ
Trigger: CTGGATCTCCAAACAGGGCCAGAAGCTGGAGATGAT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAAACCTTATTTCACCTaGACTAAGAGGCTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQKPYFT*TKRLSK
Trigger: TTTGGAGAGCCTCTTAGTCCAGGTGAAATAAGGTTT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp GTTGTGTTTATGAGTTGTGGTGATGTATGTACTGTGGGTATAGAACTTGCATTCCCTTTTGTATTGGTGTaGCAGGTCAATGCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: VVFMSCGDVCTVGIELAFPFVLV*QVNAGF
Trigger: AAAGCCAGCATTGACCTGCCACACCAATACAAAAGG...GAATGCAAGTTCTATACCCACAGTACATACATCACCACAACTCATAAACACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCATCTATTGGCAACCACTaGCCACAGGGCATTTTGTAT +
Preference number: 4 (lower is better)
Translates to: DSQNLSLLELNYHLLTMASIGNH*PQGILY
Trigger: ATACAAAATGCCCTGTGGCCAGTGGTTGCCAATAGA...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTGGGCAAGGAGAATGTaGCTGCTGAAACTGCATTCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNWARRM*LLKLHS
Trigger: AGAATGCAGTTTCAGCAGCCACATTCTCCTTGCCCA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCAATTTTTCCCCATGGATaGGGCAAAGCTAGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: DSQNLSLLELNYHLLTMAIFPHG*GKASWN
Trigger: ATTCCAGCTAGCTTTGCCCCATCCATGGGGAAAAAT...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGAAATCCCTGGTGAATaGAACTGGAGTGAAGTCCGA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNEIPGE*NWSEVR
Trigger: TCGGACTTCACTCCAGTTCCATTCACCAGGGATTTC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGAGCAGAACTGTAACTaGGGGTTTTTACTAAAGCTT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQEQNCN*GFLLKL
Trigger: AAGCTTTAGTAAAAACCCCCAGTTACAGTTCTGCTC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAATGGTAGTGCCACCTaGAGCAGAACTGTAACTGGG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCNGSAT*SRTVTG
Trigger: CCCAGTTACAGTTCTGCTCCAGGTGGCACTACCATT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTCCAAGACCTTGTGGTaGAACAATAAACCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSKTLW*NNKPGS
Trigger: GGAACCCGGTTTATTGTTCCACCACAAGGTCTTGGA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAGCTCCAAGACCTTGTaGTGGAACAATAAACCGGGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSSKTL*WNNKPG
Trigger: ACCCGGTTTATTGTTCCACCACAAGGTCTTGGAGCT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGATATAAGGAGAACATaGCTGCCAGCTCCAAGACCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNDIRRT*LPAPRP
Trigger: AGGTCTTGGAGCTGGCAGCCATGTTCTCCTTATATC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CTCCTGTTTCTTTGGAAAGCCTTCATTAACTTTGGTTCCCATGGCAGCAATTCAGGGGGCTCCATATTTTaGATTAGTAGATATAAGGAG +
Preference number: 4 (lower is better)
Translates to: LLFLWKAFINFGSHGSNSGGSIF*ISRYKE
Trigger: CTCCTTATATCTACTAATCCAAAATATGGAGCCCCC...TGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCCAAAGAAACAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTGTTGGTACAGGAGGTaGAACAGGAACCTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNCWYRR*NRNLSS
Trigger: ACTGCTAAGGTTCCTGTTCCACCTCCTGTACCAACA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGCAGTGGAGGATTACTaGGGCAAATGGCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCAVEDY*GKWQKP
Trigger: TGGTTTCTGCCATTTGCCCCAGTAATCCTCCACTGC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCAAGTTGGAGCTGCTTaGGCTAGAAGTTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNQVGAA*ARSFLS
Trigger: GGAAAGAAAACTTCTAGCTCAAGCAGCTCCAACTTG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTTTCCTGCTCTTTCTTaGAGGAAGAGGGCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCFPALS*RKRAGY
Trigger: ATAGCCTGCCCTCTTCCTTCAAGAAAGAGCAGGAAA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCATGTCTGTGGGAAAGATaGACAATGTTGTTCTGTACC +
Preference number: 4 (lower is better)
Translates to: DSQNLSLLELNYHLLTMACLWER*TMLFCT
Trigger: GGTACAGAACAACATTGTTCATCTTTCCCACAGACA...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp TTCTTAGAGGATGTTGTAGAGGTTGGCCACTTAAGGAATTATTTGATGCTAGTGAGAGGAAGAAGTTGTTaGTTTTGGCACCAGAAATGC +
Preference number: 4 (lower is better)
Translates to: FLEDVVEVGHLRNYLMLVRGRSC*FWHQKC
Trigger: GCATTTCTGGTGCCAAAATCAACAACTTCTTCCTCT...CACTAGCATCAAATAATTCCTTAAGTGGCCAACCTCTACAACATCCTCTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATACCAGCATAAGTTTCTaGACTGGAGTCCCACTGATT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNTSISF*TGVPLI
Trigger: AATCAGTGGGACTCCAGTTCAGAAACTTATGCTGGT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAACAAGAGTTGGGGTTaGTGTACCACTAGGAACTGG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCNKSWG*CTTRNW
Trigger: CCAGTTCCTAGTGGTACATCAACCCCAACTCTTGTT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTTTACTAAAGCTTGCTaGTTTGGCAGAGAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQFTKAC*FGREAK
Trigger: TTTTGCTTCTCTGCCAAATCAGCAAGCTTTAGTAAA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCAAGGTTCACTGAACTaGCTCCCGACTAGACTAGTT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCQGSLN*LPTRLV
Trigger: AACTAGTCTAGTCGGGAGTCAGTTCAGTGAACCTTG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCCGTTAATCATAATCTaGGTACCAGGTGCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNPLIII*VPGAKG
Trigger: ACCTTTGGCACCTGGTACTCAGATTATGATTAACGG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTCAGGATTTTCAGTTTaGCCTACAGCAGTGTACCAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSGFSV*PTAVYH
Trigger: GTGGTACACTGCTGTAGGGCAAACTGAAAATCCTGA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAGGGCAGGCTATCTCTaGTACATCTATGTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNRAGYL*YIYVLH
Trigger: ATGGAGAACATAGATGTAGCAGAGATAGCCTGCCCT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGCTGAAACAGTCAATCTaGACATCACTTTCTAGATTC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQLKQSI*TSLSRF
Trigger: GAATCTAGAAAGTGATGTGCAGATTGACTGTTTCAG...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAATGATGGCTCTGTATaGTTTGATTCACTGAAACAG +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQNDGSV*FDSLKQ
Trigger: CTGTTTCAGTGAATCAAAGCATACAGAGCCATCATT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATATTCTTGGCTTTTCCTaGCTCACTCTGGCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNILGFS*LTLASL
Trigger: AAGACTAGCCAGAGTGAGGCAGGAAAAGCCAAGAAT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTTTTGGCACCAGAAATaGCTGCAGCTGAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCFWHQK*LQLRSK
Trigger: TTTGCTCCTCAGCTGCAGGCATTTCTGGTGCCAAAA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAGGTGTCATATTAATTaGAGTTCCATTGCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQRCHIN*SSIARR
Trigger: TCTTCTGGCAATGGAACTGCAATTAATATGACACCT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGACATGCAGATTCTTCTaGATTGTTGCTAACAGTTCA +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQTCRFF*IVANSS
Trigger: TGAACTGTTAGCAACAATGCAGAAGAATCTGCATGT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGAAATGCCCAATAGCTaGAATTTCCCACATGGTCTC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNEMPNS*NFPHGL
Trigger: GAGACCATGTGGGAAATTCCAGCTATTGGGCATTTC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAAGGTAGGTCTGCGATaGGGAGGACTTAATAGAGAA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNKVGLR*GGLNRE
Trigger: TTCTCTATTAAGTCCTCCCCATCGCAGACCTACCTT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTGCACCACAGAACTGTaGAAAATGTACATAAGCATT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQCTTEL*KMYISI
Trigger: AATGCTTATGTACATTTTCCACAGTTCTGTGGTGCA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTTGTATTTTAATGGGTaGAATTGGAAATTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQLYFNG*NWKFWG
Trigger: GCCCCAGAATTTCCAATTCCACCCATTAAAATACAA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGGTTTGGTCCCTTTCTaGAGAGTAGACACTGGTACT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCGLVPF*RVDTGT
Trigger: AGTACCAGTGTCTACTCTCCAGAAAGGGACCAAACC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCCTTTTGTATTGGTGTaGCAGGTCAATGCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNPFVLV*QVNAGF
Trigger: AAAGCCAGCATTGACCTGCCACACCAATACAAAAGG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTCTATTGGCAACCACTaGCCACAGGGCATTTTGTAT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSIGNH*PQGILY
Trigger: ATACAAAATGCCCTGTGGCCAGTGGTTGCCAATAGA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTGGGCAAGGAGAATGTaGCTGCTGAAACTGCATTCT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCWARRM*LLKLHS
Trigger: AGAATGCAGTTTCAGCAGCCACATTCTCCTTGCCCA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGAATTTTGATCTGGGTTaGTCTGTACTTTTACAACTC +
Preference number: 4 (lower is better)
Translates to: AETPVDVSAGVILIAVPLNFDLG*SVLLQL
Trigger: GAGTTGTAAAAGTACAGACCAACCCAGATCAAAATT...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATATTTTTCCCCATGGATaGGGCAAAGCTAGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNIFPHG*GKASWN
Trigger: ATTCCAGCTAGCTTTGCCCCATCCATGGGGAAAAAT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCCACTGCCAGTGGTGTaGCCTAATGTAAGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCPLPVV*PNVSLR
Trigger: TCTCAAACTTACATTAGGCCACACCACTGGCAGTGG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGTTTTATCTATCACGTaGCCCAAATCACCACTGCCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNVLSIT*PKSPLP
Trigger: TGGCAGTGGTGATTTGGGCCACGTGATAGATAAAAC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp GGAAAGCCTTCATTAACTTTGGTTCCCATGGCAGCAATTCATTTAAAAGACGTAGGAATCAGTACTATTTaGGGTTGCTCTGGAGTCTTA +
Preference number: 4 (lower is better)
Translates to: GKPSLTLVPMAAIHLKDVGISTI*GCSGVL
Trigger: TAAGACTCCAGAGCAACCCCAAATAGTACTGATTCC...TACGTCTTTTAAATGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATACTAGTTACATTGGATaGTGCCGAAGCCGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNTSYIG*CRSRVN
Trigger: ATTCACACGGCTTCGGCACCATCCAATGTAACTAGT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTCCAAGACCTTGTGGTaGAACAATAAACCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCSKTLW*NNKPGS
Trigger: GGAACCCGGTTTATTGTTCCACCACAAGGTCTTGGA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp TTAGGAGACACTACTGGTTGTGTAGTTGAAATCAGAACAGATGATGCAAGGTGTGGCAGAGTTATCTATTaGTGTAGATTGAATGCCTTG +
Preference number: 4 (lower is better)
Translates to: LGDTTGCVVEIRTDDARCGRVIY*CRLNAL
Trigger: CAAGGCATTCAATCTACACCAATAGATAACTCTGCC...ACACCTTGCATCATCTGTTCTGATTTCAACTACACAACCAGTAGTGTCTCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTACGCAGGACTTCGACTaGCAGATACAACAATCTGAG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCTQDFD*QIQQSE
Trigger: CTCAGATTGTTGTATCTGCCAGTCGAAGTCCTGCGT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAGAAAAGCATTACACTaGGGCATCAGAAGACAACGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNRKALH*GIRRQR
Trigger: ACGTTGTCTTCTGATGCCTCAGTGTAATGCTTTTCT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCTCTGGTACAGTAGGTaGCTTTATGACAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNLWYSR*LYDSFP
Trigger: AGGAAAACTGTCATAAAGTCACCTACTGTACCAGAG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp GGAAAGCCTTCATTAACTTTGGTTCCCATGGCAGCAATTCATTTAAAAGACGTATCATCTGAATCAAAGTaGTCTTTCTCCAGGATATCC +
Preference number: 4 (lower is better)
Translates to: GKPSLTLVPMAAIHLKDVSSESK*SFSRIS
Trigger: GGATATCCTGGAGAAAGATCACTTTGATTCAGATGA...TACGTCTTTTAAATGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGTGGAAGGAGGCAGTTaGTTTGTTAAGGTCACTTTA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNVEGGS*FVKVTL
Trigger: TAAAGTGACCTTAACAAATCAACTGCCTCCTTCCAC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AAGGAATTATTTGATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTAGTGGAAGGAGGCAGTTaGTTTGTTAAGGTCACTTTA +
Preference number: 4 (lower is better)
Translates to: KELFDASVIFWAELSIGVVEGGS*FVKVTL
Trigger: TAAAGTGACCTTAACAAATCAACTGCCTCCTTCCAC...TACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATCAAATAATTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAGAAATGCCTGCAGCTaGGGAGCAAAAGTGAAAACT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCRNACS*GAKVKT
Trigger: AGTTTTCACTTTTGCTCCTCAGCTGCAGGCATTTCT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAGAGGAAGAAGTTGTTaGTTTTGGCACCAGAAATGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNRGRSC*FWHQKC
Trigger: GCATTTCTGGTGCCAAAATCAACAACTTCTTCCTCT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGAACTGGAGTCCCACTaGTTACATCTCCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCELESH*LHLHLL
Trigger: CAACAAATGGAGATGTAATCAGTGGGACTCCAGTTC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp AAGGAATTATTTGATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTAAGGTATCATTTCCACTaGCTAAAACAGGAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: KELFDASVIFWAELSIGVRYHFH*LKQEVV
Trigger: CACAACCTCCTGTTTTAGTCAGTGGAAATGATACCT...TACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATCAAATAATTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTTACCTGGACTTGTTaGAAGGGACGACAATTCAGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNFTWTC*KGRQFS
Trigger: ACTGAATTGTCGTCCCTTTCAACAAGTCCAGGTAAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTACAGGTGGGTCCAAATaGAACACTGAAGTGCTACTT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCTGGSK*NTEVLL
Trigger: AAGTAGCACTTCAGTGTTTCATTTGGACCCACCTGT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTAAACACAGAACCTTaGAACCCTCCTCAGAACAGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNLNTEP*NPPQNS
Trigger: ACTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp TTAATTACTGAAGTCAGTGATACTGTTGGTACAGGAGGTGGAACAGGAACCTTAAATGATGGCTCTGTATaGTTTGATTCACTGAAACAG +
Preference number: 4 (lower is better)
Translates to: LITEVSDTVGTGGGTGTLNDGSV*FDSLKQ
Trigger: CTGTTTCAGTGAATCAAAGCATACAGAGCCATCATT...TAAGGTTCCTGTTCCACCTCCTGTACCAACAGTATCACTGACTTCAGTAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTATTCTTGGCTTTTCCTaGCTCACTCTGGCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCILGFS*LTLASL
Trigger: AAGACTAGCCAGAGTGAGGCAGGAAAAGCCAAGAAT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCATTTCAGCTCTTGCTTTaGTTCAGAAGAATCAGCAGT +
Preference number: 4 (lower is better)
Translates to: DSQNLSLLELNYHLLTMAFQLLL*FRRISS
Trigger: ACTGCTGATTCTTCTGAAGCAAAGCAAGAGCTGAAA...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCTGGAATTTCCCACATaGTCTCCATACAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCLEFPT*SPYKLE
Trigger: CTCCAACTTGTATGGAGACCATGTGGGAAATTCCAG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAGGTTTTTCTTCCAATaGATTAACTTCTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQRFFFQ*INFSKN
Trigger: GTTCTTGGAGAAGTTAATCCATTGGAAGAAAAACCT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCTTTGCCTTCTTCCTTaGAGAAAGCTCTTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNLCLLP*RKLFCA
Trigger: AGCACAAAAGAGCTTTCTCCAAGGAAGAAGGCAAAG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGAGCATTTCTACCTGTaGAAGGAGGCAGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCEHFYL*KEAVDL
Trigger: CAAATCAACTGCCTCCTTCCACAGGTAGAAATGCTC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAAGGACCTTTTGTATTaGTGTGGCAGGTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCKDLLY*CGRSML
Trigger: CAGCATTGACCTGCCACACCAATACAAAAGGTCCTT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTCTATTGGCAACCACTaGCCACAGGGCATTTTGTAT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCSIGNH*PQGILY
Trigger: ATACAAAATGCCCTGTGGCCAGTGGTTGCCAATAGA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTATTTTGAAGATCTATTaGCAACCACTGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCILKIY*QPLATG
Trigger: CCCTGTGGCCAGTGGTTGCCAATAGATCTTCAAAAT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTTCTGTTGAAGTGGTaGCACTTCTTTTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNFLLKW*HFFCNC
Trigger: GCAGTTGCAAAAGAAGTGCCACCACTTCAACAGAAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGCTGTATTTGGTAGTTaGGTAGAAACAGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNAVFGS*VETVPG
Trigger: ACCAGGAACTGTTTCTACCCAACTACCAAATACAGC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAGGCGACAAAGGCTGTaGTCTAGCACTACTTATATT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNRRQRL*SSTTYI
Trigger: AATATAAGTAGTGCTAGACCACAGCCTTTGTCGCCT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTATTTTTCCCCATGGATaGGGCAAAGCTAGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCIFPHG*GKASWN
Trigger: ATTCCAGCTAGCTTTGCCCCATCCATGGGGAAAAAT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGATATGCTTTATGCAATaGAGGAGGAAGAGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQICFMQ*RRKSLF
Trigger: AAACAAACTCTTCCTCCTCCATTGCATAAAGCATAT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGGAATCAGTACTATTTaGGGTTGCTCTGGAGTCTTA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNGISTI*GCSGVL
Trigger: TAAGACTCCAGAGCAACCCCAAATAGTACTGATTCC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCCAAGTACAGCATCTTaGACTTCCTTTTGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNPSTAS*TSFCVS
Trigger: TGAAACACAAAAGGAAGTTCAAGATGCTGTACTTGG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCTCTGGTACAGTAGGTaGCTTTATGACAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCLWYSR*LYDSFP
Trigger: AGGAAAACTGTCATAAAGTCACCTACTGTACCAGAG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp TTCTTAGAGGATGTTGTAGAGGTTGGCCACTTAAGGAATTATTTGATGCTAGTGGATCAGGTTGTCTTCTaGAATCATCATAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FLEDVVEVGHLRNYLMLVDQVVF*NHHSLS
Trigger: AGAAAGACTATGATGATTTCAGAAGACAACCTGATC...CACTAGCATCAAATAATTCCTTAAGTGGCCAACCTCTACAACATCCTCTAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTCATCTGAATCAAAGTaGTCTTTCTCCAGGATATCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSSESK*SFSRIS
Trigger: GGATATCCTGGAGAAAGATCACTTTGATTCAGATGA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGTGGAAGGAGGCAGTTaGTTTGTTAAGGTCACTTTA +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCVEGGS*FVKVTL
Trigger: TAAAGTGACCTTAACAAATCAACTGCCTCCTTCCAC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTGTCTGTGGGAAAGATaGACAATGTTGTTCTGTACC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCCLWER*TMLFCT
Trigger: GGTACAGAACAACATTGTTCATCTTTCCCACAGACA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGTTGTGCAAAACAGTTaGAGGAACTACCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCVVQNS*RNYQDL
Trigger: CAAATCCTGGTAGTTCCTTCAACTGTTTTGCACAAC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGTATTGGGTGAATTTTaGTCTGGGTTGGTCTGTACT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCVLGEF*SGLVCT
Trigger: AGTACAGACCAACCCAGATCAAAATTCACCCAATAC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAGATACAGTATTGGGTaGATTTTGATCTGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNRYSIG*ILIWVG
Trigger: ACCAACCCAGATCAAAATTCACCCAATACTGTATCT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCATGTTTGGCTAAAAGGTaGAAGACTAGATGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: DSQNLSLLELNYHLLTMACLAKR*KTRCSS
Trigger: ACTACTACATCTAGTCTTTCACCTTTTAGCCAAACA...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAGAAGAGGGCATGTGTaGAGTTTTATCTATCACGTG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCRRGHV*SFIYHV
Trigger: CACGTGATAGATAAAACTTCACACATGCCCTCTTCT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAAGAATAGATGGAGCTaGTACCAGCATAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNKNRWS*YQHKFL
Trigger: CAGAAACTTATGCTGGTATCAGCTCCATCTATTCTT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTATTTGCTCCGGTAACTaGAAGCACATTTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCICSGN*KHIYCS
Trigger: AGAGCAGTAAATGTGCTTTCAGTTACCGGAGCAAAT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAGGTATCATTTCCACTaGCTAAAACAGGAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCRYHFH*LKQEVV
Trigger: CACAACCTCCTGTTTTAGTCAGTGGAAATGATACCT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTCTATTGGTGTAGATTaGATGCCTTGGCCACTGTTA +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCSIGVD*MPWPLL
Trigger: TAACAGTGGCCAAGGCATTCAATCTACACCAATAGA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTATTTGATGCTAGTGTaGTCTTCTGGGCAGAGTTAT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNYLMLV*SSGQSY
Trigger: ATAACTCTGCCCAGAAGATCACACTAGCATCAAATA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCCTCAGAACAGTAAGTaGAATGGAACAGATCTTTCC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCPQNSK*NGTDLS
Trigger: GGAAAGATCTGTTCCATTTCACTTACTGTTCTGAGG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTAGTGCAAATAAGCTaGAACTCTGGTACAGTAGGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNLVQIS*NSGTVG
Trigger: ACCTACTGTACCAGAGTTTCAGCTTATTTGCACTAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399933.8
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGCCTCTAGATGTAACTaGTATCGTTGTCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNASRCN*YRCLFS
Trigger: AGAGAAAAGACAACGATAGCAGTTACATCTAGAGGC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGCTAAACAAAGGAAATaGCCAATAGCTGGAATTTCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNAKQRK*PIAGIS
Trigger: GGAAATTCCAGCTATTGGGCATTTCCTTTGTTTAGC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp TTCTTAGAGGATGTTGTAGAGGTTGGCCACTTAAGGAATTATTTGATGCTAGTGCTGAAACAGTCAATCTaGACATCACTTTCTAGATTC +
Preference number: 4 (lower is better)
Translates to: FLEDVVEVGHLRNYLMLVLKQSI*TSLSRF
Trigger: GAATCTAGAAAGTGATGTGCAGATTGACTGTTTCAG...CACTAGCATCAAATAATTCCTTAAGTGGCCAACCTCTACAACATCCTCTAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTTCAGCTCTTGCTTTaGTTCAGAAGAATCAGCAGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNFQLLL*FRRISS
Trigger: ACTGCTGATTCTTCTGAAGCAAAGCAAGAGCTGAAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTGGAGTCTTAACATATaGTTTATGCAATGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNWSLNI*FMQWRR
Trigger: CCTCCTCCATTGCATAAAGCATATGTTAAGACTCCA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAGTCTAAATTCAAGATaGAGCTCTGTCAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCSLNSR*SSVRLL
Trigger: GAGAAGCCTGACAGAGCTGCATCTTGAATTTAGACT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTTAATGGGTGGAATTaGAAATTCTGGGGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNFNGWN*KFWGLK
Trigger: TTTCAGGCCCCAGAATTTCCAATTCCACCCATTAAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAGCAGGACAGCAAGCTaGATCAAAATTATTTTCCTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSRTAS*IKIIFL
Trigger: CAGGAAAATAATTTTGATCCAGCTTGCTGTCCTGCT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAAACCTTATTTCACCTaGACTAAGAGGCTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNKPYFT*TKRLSK
Trigger: TTTGGAGAGCCTCTTAGTCCAGGTGAAATAAGGTTT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGTGGCAGTTAATTTCTaGATGATCACTGTGACTTCC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCVAVNF*MITVTS
Trigger: GGAAGTCACAGTGATCATCCAGAAATTAACTGCCAC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCGGCTCCTGTTTCTTTaGAAAGCCTTCATTAACTTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNRLLFL*KAFINF
Trigger: AAAGTTAATGAAGGCTTTCCAAAGAAACAGGAGCCG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCTTTGCCTTCTTCCTTaGAGAAAGCTCTTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCLCLLP*RKLFCA
Trigger: AGCACAAAAGAGCTTTCTCCAAGGAAGAAGGCAAAG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTTTCTGTTGAAGTGGTaGCACTTCTTTTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCFLLKW*HFFCNC
Trigger: GCAGTTGCAAAAGAAGTGCCACCACTTCAACAGAAA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGCTGTATTTGGTAGTTaGGTAGAAACAGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCAVFGS*VETVPG
Trigger: ACCAGGAACTGTTTCTACCCAACTACCAAATACAGC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp GTTTGGCTAAAAGGTGAAAGACTAGATGTAGTAGTTGTTCCAGCTACAGGTGAAATATGCTTTATGCAATaGAGGAGGAAGAGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VWLKGERLDVVVVPATGEICFMQ*RRKSLF
Trigger: AAACAAACTCTTCCTCCTCCATTGCATAAAGCATAT...TTCACCTGTAGCTGGAACAACTACTACATCTAGTCTTTCACCTTTTAGCCAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGGAATCAGTACTATTTaGGGTTGCTCTGGAGTCTTA +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCGISTI*GCSGVL
Trigger: TAAGACTCCAGAGCAACCCCAAATAGTACTGATTCC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGAGCAGAACTGTAACTaGGGGTTTTTACTAAAGCTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNEQNCN*GFLLKL
Trigger: AAGCTTTAGTAAAAACCCCCAGTTACAGTTCTGCTC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGGGGGCTCCATATTTTaGATTAGTAGATATAAGGAG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNGGSIF*ISRYKE
Trigger: CTCCTTATATCTACTAATCCAAAATATGGAGCCCCC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGGCAGAGTTATCTATTaGTGTAGATTGAATGCCTTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNGRVIY*CRLNAL
Trigger: CAAGGCATTCAATCTACACCAATAGATAACTCTGCC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGCTAGTGTGATCTTCTaGGCAGAGTTATCTATTGGT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCASVIF*AELSIG
Trigger: ACCAATAGATAACTCTGCCCAGAAGATCACACTAGC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGATTACTGGGGCAAATaGCAGAAACCAAAGATGTCT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCDYWGK*QKPKMS
Trigger: AGACATCTTTGGTTTCTGCCATTTGCCCCAGTAATC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp TTAATTACTGAAGTCAGTGATACTGTTGGTACAGGAGGTGGAACAGGAACCTTAATGCTGGAGTATTTATaGTATTCAAAATGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LITEVSDTVGTGGGTGTLMLEYL*YSKWLL
Trigger: AAGGAGCCATTTTGAATACCATAAATACTCCAGCAT...TAAGGTTCCTGTTCCACCTCCTGTACCAACAGTATCACTGACTTCAGTAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTCTTCTATTTCCTTTTaGCTAGCTTCTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSSISF*LASSAS
Trigger: AGAAGCAGAAGAAGCTAGTCAAAAGGAAATAGAAGA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCCAAGTACAGCATCTTaGACTTCCTTTTGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCPSTAS*TSFCVS
Trigger: TGAAACACAAAAGGAAGTTCAAGATGCTGTACTTGG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCAGGTTTGTAAGACTTaGATGCAAGAGAATGAAGAC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCQVCKT*MQENED
Trigger: GTCTTCATTCTCTTGCATTCAAGTCTTACAAACCTG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTATCCAGAGGTTCTGTTaGGTCTATAGACTTACTGAT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCIQRFC*VYRLTD
Trigger: ATCAGTAAGTCTATAGACTCAACAGAACCTCTGGAT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTTACAGAGCTATTTTaGAGATCTATTGGCAACCAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNFTELF*RSIGNH
Trigger: GTGGTTGCCAATAGATCTTCAAAATAGCTCTGTAAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAGATACAGTATTGGGTaGATTTTGATCTGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCRYSIG*ILIWVG
Trigger: ACCAACCCAGATCAAAATTCACCCAATACTGTATCT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAAGAATAGATGGAGCTaGTACCAGCATAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCKNRWS*YQHKFL
Trigger: CAGAAACTTATGCTGGTATCAGCTCCATCTATTCTT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTTACTAAAGCTTGCTaGTTTGGCAGAGAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNFTKAC*FGREAK
Trigger: TTTTGCTTCTCTGCCAAATCAGCAAGCTTTAGTAAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGCTAAACAAAGGAAATaGCCAATAGCTGGAATTTCC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCAKQRK*PIAGIS
Trigger: GGAAATTCCAGCTATTGGGCATTTCCTTTGTTTAGC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGAGAAAGCTCTTTTGTaGTGTCATCCACATAATCAG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCEKALL*CHPHNQ
Trigger: CTGATTATGTGGATGACAGCACAAAAGAGCTTTCTC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCTGTTGTCTCATTTGTaGTTAACTTTGCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCLLSHL*LTLPSS
Trigger: GGAAGAAGGCAAAGTTAAGCACAAATGAGACAACAG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCTGAAACAGTCAATCTaGACATCACTTTCTAGATTC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNLKQSI*TSLSRF
Trigger: GAATCTAGAAAGTGATGTGCAGATTGACTGTTTCAG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTATCAGCAGTCTGTTGTaGAAAACAGTTGAAGGAACT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCISSLL*KTVEGT
Trigger: AGTTCCTTCAACTGTTTTGCACAACAGACTGCTGAT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTTTCAGCTCTTGCTTTaGTTCAGAAGAATCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCFQLLL*FRRISS
Trigger: ACTGCTGATTCTTCTGAAGCAAAGCAAGAGCTGAAA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp AAGGAATTATTTGATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTAAGGTGTCATATTAATTaGAGTTCCATTGCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: KELFDASVIFWAELSIGVRCHIN*SSIARR
Trigger: TCTTCTGGCAATGGAACTGCAATTAATATGACACCT...TACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATCAAATAATTCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTGTATTTTAATGGGTaGAATTGGAAATTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNLYFNG*NWKFWG
Trigger: GCCCCAGAATTTCCAATTCCACCCATTAAAATACAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCATAAGTTTCTGAACTaGAGTCCCACTGATTACATC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCHKFLN*SPTDYI
Trigger: GATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTATTTGGGGTTGCTCTaGAGTCTTAACATATGCTTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNYLGLL*SLNICF
Trigger: AAAGCATATGTTAAGACTCCAGAGCAACCCCAAATA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGGGGGCTCCATATTTTaGATTAGTAGATATAAGGAG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCGGSIF*ISRYKE
Trigger: CTCCTTATATCTACTAATCCAAAATATGGAGCCCCC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTCTTCTATTTCCTTTTaGCTAGCTTCTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCSSISF*LASSAS
Trigger: AGAAGCAGAAGAAGCTAGTCAAAAGGAAATAGAAGA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGATCAGGTTGTCTTCTaGAATCATCATAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCDQVVF*NHHSLS
Trigger: AGAAAGACTATGATGATTTCAGAAGACAACCTGATC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTTTACAGAGCTATTTTaGAGATCTATTGGCAACCAC +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCFTELF*RSIGNH
Trigger: GTGGTTGCCAATAGATCTTCAAAATAGCTCTGTAAA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR TCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTGTTTGGCTAAAAGGTaGAAGACTAGATGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCCLAKR*KTRCSS
Trigger: ACTACTACATCTAGTCTTTCACCTTTTAGCCAAACA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAATGATGGCTCTGTATaGTTTGATTCACTGAAACAG +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCNDGSV*FDSLKQ
Trigger: CTGTTTCAGTGAATCAAAGCATACAGAGCCATCATT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAGGTGTCATATTAATTaGAGTTCCATTGCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCRCHIN*SSIARR
Trigger: TCTTCTGGCAATGGAACTGCAATTAATATGACACCT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTACATGCAGATTCTTCTaGATTGTTGCTAACAGTTCA +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCTCRFF*IVANSS
Trigger: TGAACTGTTAGCAACAATGCAGAAGAATCTGCATGT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAGGTTTTTCTTCCAATaGATTAACTTCTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNRFFFQ*INFSKN
Trigger: GTTCTTGGAGAAGTTAATCCATTGGAAGAAAAACCT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAATTTTGATCTGGGTTaGTCTGTACTTTTACAACTC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNNFDLG*SVLLQL
Trigger: GAGTTGTAAAAGTACAGACCAACCCAGATCAAAATT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATATATGCTTTATGCAATaGAGGAGGAAGAGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNICFMQ*RRKSLF
Trigger: AAACAAACTCTTCCTCCTCCATTGCATAAAGCATAT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATATGCTGGAGTATTTATaGTATTCAAAATGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNMLEYL*YSKWLL
Trigger: AAGGAGCCATTTTGAATACCATAAATACTCCAGCAT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
3UTR CAA 72 bp TCACAAAATTTGAGCTTACTGGAACTGAATTACCACTaGTTGACAATGGCAAAATATAGCCCTTGCTACTTT +
Preference number: 4 (lower is better)
Translates to: SQNLSLLELNYH*LTMAKYSPCYF
Trigger: AAAGTAGCAAGGGCTATATTTTGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR GCA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTGTGGGTATAGAACTTaGATTCCCAAAAGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: PYHRYAATVQIQEETCQCCGYRT*IPKRVY
Trigger: ATAAACTCTTTTGGGAATGCAAGTTCTATACCCACA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS GCA 90 bp GCCCCGGCAGGCCTAGGCTGGGCGGTGTGGAACAGCCGCTCGAGGTaGTGGGGGACGCGTGAGCGCGAGCCGCTTCCTCACGGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: APAGLGWAVWNSRSR*WGTREREPLPHGSA
Trigger: GGCCGAGCCGTGAGGAAGCGGCTCGCGCTCACGCGTCCCCCAGCACCTCGAGCGGCTGTTCCACACCGCCCAGCCTAGGCCTGCCGGGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399933.8
ENST00000513355.2
CDS CCA 90 bp CCGGCAGGCCTAGGCTGGGCGGTGTGGAACAGCCGCTCGAGGTGCTaGGGGACGCGTGAGCGCGAGCCGCTTCCTCACGGCTCGGCCGCG +
Preference number: 5 (lower is better)
Translates to: PAGLGWAVWNSRSRC*GTREREPLPHGSAA
Trigger: CGCGGCCGAGCCGTGAGGAAGCGGCTCGCGCTCACGCGTCCCCCAGCACCTCGAGCGGCTGTTCCACACCGCCCAGCCTAGGCCTGCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399933.8
ENST00000513355.2
CDS GCA 90 bp CCTCCCCAGCCGGCTCCATCGCTCCCGGCGTCCCGGGCACACTCATaGCCCGGCAGGCCTAGGCTGGGCGGTGTGGAACAGCCGCTCGAG +
Preference number: 5 (lower is better)
Translates to: PPQPAPSLPASRAHS*PGRPRLGGVEQPLE
Trigger: CTCGAGCGGCTGTTCCACACCGCCCAGCCTAGGCCTGCCGGGGCATGAGTGTGCCCGGGACGCCGGGAGCGATGGAGCCGGCTGGGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399933.8
ENST00000513355.2
CDS CCA 90 bp CGTCCCGGGCACACTCATGCCCCGGCAGGCCTAGGCTGGGCGGTGTaGAACAGCCGCTCGAGGTGCTGGGGGACGCGTGAGCGCGAGCCG +
Preference number: 5 (lower is better)
Translates to: RPGHTHAPAGLGWAV*NSRSRCWGTREREP
Trigger: CGGCTCGCGCTCACGCGTCCCCCAGCACCTCGAGCGGCTGTTCCACACCGCCCAGCCTAGGCCTGCCGGGGCATGAGTGTGCCCGGGACG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399933.8
ENST00000513355.2
CDS CCA 90 bp CGCTCCCGGCGTCCCGGGCACACTCATGCCCCGGCAGGCCTAGGCTaGGCGGTGTGGAACAGCCGCTCGAGGTGCTGGGGGACGCGTGAG +
Preference number: 5 (lower is better)
Translates to: RSRRPGHTHAPAGLG*AVWNSRSRCWGTRE
Trigger: CTCACGCGTCCCCCAGCACCTCGAGCGGCTGTTCCACACCGCCCAGCCTAGGCCTGCCGGGGCATGAGTGTGCCCGGGACGCCGGGAGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399933.8
ENST00000513355.2
CDS CCA 90 bp TCCTCCAGCGAGGAGGCACTCCTTCCGTGGGCCGGCCCTGAGGTCTaGGCCGCCGCTGCCACCTCCTCCTCGTCGTCCTCTCCTTCGGCC +
Preference number: 5 (lower is better)
Translates to: SSSEEALLPWAGPEV*AAAATSSSSSSPSA
Trigger: GGCCGAAGGAGAGGACGACGAGGAGGAGGTGGCAGCGGCGGCCCAGACCTCAGGGCCGGCCCACGGAAGGAGTGCCTCCTCGCTGGAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS GCA 90 bp CGTACTGGCCGCTGGCGAACTTCTCTTCCATCTGCAGCAGACACATaGCCTGTCCGGGCTGCTGCGGGAAGGCGCGACCGCCCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: RTGRWRTSLPSAADT*PVRAAAGRRDRPGP
Trigger: GGGGCCGGGGCGGTCGCGCCTTCCCGCAGCAGCCCGGACAGGGCATGTGTCTGCTGCAGATGGAAGAGAAGTTCGCCAGCGGCCAGTACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS GCA 90 bp GGATGCGGTAGCCCTGCTGTAGCTCGTAGGTCAGCTCCTGCTCCTTaGAGCAACCGCCTCCGATCACCATCGCCTCCATCTCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: GCGSPAVARRSAPAP*SNRLRSPSPPSLPP
Trigger: AGGAGGAAGAGATGGAGGCGATGGTGATCGGAGGCGGTTGCTGCAAGGAGCAGGAGCTGACCTACGAGCTACAGCAGGGCTACCGCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS CCA 90 bp AGCATCAACCTGAAGTCCGCCACGAACTCGGTGATGCCCCCGTACTaGCCGCTGGCGAACTTCTCTTCCATCTGCAGCAGACACATGCCC +
Preference number: 5 (lower is better)
Translates to: SINLKSATNSVMPPY*PLANFSSICSRHMP
Trigger: GGGCATGTGTCTGCTGCAGATGGAAGAGAAGTTCGCCAGCGGCCAGTACGGGGGCATCACCGAGTTCGTGGCGGACTTCAGGTTGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS-3UTR CAA 90 bp CACAGAGTTCCTCAGACAGTGTCCCAGGTGATGGACATGGAGACTTGGGCTGAGAGCTCACTGGACTTGTaGAAAGGGACGACAATTCAG +
Preference number: 5 (lower is better)
Translates to: HRVPQTVSQVMDMETWAESSLDL*KGTTIQ
Trigger: CTGAATTGTCGTCCCTTTCAACAAGTCCAGTGAGCT...CTCAGCCCAAGTCTCCATGTCCATCACCTGGGACACTGTCTGAGGAACTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR CAA 90 bp TGGTGTGGCAGGTCAATGCTGGCTTTATCGGGCTTGCTTCCGGAGGAGATAAAAGCTGAAACTGCATTCTaGGCTTTTCCTGCCTCACTC +
Preference number: 5 (lower is better)
Translates to: WCGRSMLALSGLLPEEIKAETAF*AFPASL
Trigger: GAGTGAGGCAGGAAAAGCCAAGAATGCAGTTTCAGC...TTTTATCTCCTCCGGAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CACAGAGTTCCTCAGACAGTGTCCCAGGTGATGGACATGGAGACTTGGGCTGAGCAGTGTTTCCGAGACTaGATGAGCAAAGTCTATTTG +
Preference number: 5 (lower is better)
Translates to: HRVPQTVSQVMDMETWAEQCFRD*MSKVYL
Trigger: CAAATAGACTTTGCTCATCAAGTCTCGGAAACACTG...CTCAGCCCAAGTCTCCATGTCCATCACCTGGGACACTGTCTGAGGAACTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR CAA 90 bp GCTACTTGGCAGTGGAGGATTACTGGGGCAAATGGCAGAAACCAAAGATGTCTTCTGGCTTTATCGGGCTaGCTTCCGGAGGAGATAAAA +
Preference number: 5 (lower is better)
Translates to: ATWQWRITGANGRNQRCLLALSG*LPEEIK
Trigger: TTTTATCTCCTCCGGAAGCAAGCCCGATAAAGCCAG...AAGACATCTTTGGTTTCTGCCATTTGCCCCAGTAATCCTCCACTGCCAAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp AAGATGCAGCTCTGTCAGGCTTCTCTAAGCCCGACGACTGAAAAGCAGGGAAGAAAAGGACCTTTTGTATaGGTGTGGCAGGTCAATGCT +
Preference number: 5 (lower is better)
Translates to: KMQLCQASLSPTTEKQGRKGPFV*VWQVNA
Trigger: AGCATTGACCTGCCACACCAATACAAAAGGTCCTTT...TCTTCCCTGCTTTTCAGTCGTCGGGCTTAGAGAAGCCTGACAGAGCTGCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp TGGTGTGGCAGGTCAATGCTGGCTTTATCGGGCTTGCTTCCGGAGGAGATAAAATATTTTGAAGATCTATaGGCAACCACTGGCCACAGG +
Preference number: 5 (lower is better)
Translates to: WCGRSMLALSGLLPEEIKYFEDL*ATTGHR
Trigger: CCTGTGGCCAGTGGTTGCCAATAGATCTTCAAAATA...TTTTATCTCCTCCGGAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CAGAGCGATACTGAGGGTGCTCTCATTTCTCTGTGGAAAAGGCTCTCCTCACAGGAAAGCTCACTGGACTaGTTGAAAGGGACGACAATT +
Preference number: 5 (lower is better)
Translates to: QSDTEGALISLWKRLSSQESSLD*LKGTTI
Trigger: AATTGTCGTCCCTTTCAACAAGTCCAGTGAGCTTTC...CTGTGAGGAGAGCCTTTTCCACAGAGAAATGAGAGCACCCTCAGTATCGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR CAA 90 bp GCTCTCATTTCTCTGTGGAAAAGGCTCTCCTCACAGAGTTCCTCAGACAGTGTCAAATGCTCAAGAAAGTaGGATGGCAGCTTGGCACAC +
Preference number: 5 (lower is better)
Translates to: ALISLWKRLSSQSSSDSVKCSRK*DGSLAH
Trigger: GTGTGCCAAGCTGCCATCCAACTTTCTTGAGCATTT...GACACTGTCTGAGGAACTCTGTGAGGAGAGCCTTTTCCACAGAGAAATGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGTCAGCTCCTGCTCCTaGCAGCAACCGCCTCCGATC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNVSSCS*QQPPPI
Trigger: GATCGGAGGCGGTTGCTGCAAGGAGCAGGAGCTGAC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGCCGTGTGAATGGTAGTGCCACCTGGAGCAGAACTGTAACTGGGGGTTTTTACTTTGTAAAGGACCTTTaGTATTGGTGTGGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: SRVNGSATWSRTVTGGFYFVKDL*YWCGRS
Trigger: TGACCTGCCACACCAATACAAAAGGTCCTTTACAAA...GTAAAAACCCCCAGTTACAGTTCTGCTCCAGGTGGCACTACCATTCACACGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp TGGTGTGGCAGGTCAATGCTGGCTTTATCGGGCTTGCTTCCGGAGGAGATAAAAAAGCAGAGGAAGAAGTaGTTGATTTTGGCACCAGAA +
Preference number: 5 (lower is better)
Translates to: WCGRSMLALSGLLPEEIKKQRKK*LILAPE
Trigger: TTCTGGTGCCAAAATCAACAACTTCTTCCTCTGCTT...TTTTATCTCCTCCGGAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCACACCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp TTCTTGTCAGCAAACCTTCATCAAGTCTTCAGAGCGATACTGAGGGTGCTCTCAGGCCTCGAGAAAGTCTaGGAAAGAAGCACTTTCTGC +
Preference number: 5 (lower is better)
Translates to: FLSANLHQVFRAILRVLSGLEKV*ERSTFC
Trigger: GCAGAAAGTGCTTCTTTCCAAGACTTTCTCGAGGCC...TGAGAGCACCCTCAGTATCGCTCTGAAGACTTGATGAAGGTTTGCTGACAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGTCAGCTCCTGCTCCTaGCAGCAACCGCCTCCGATC +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCVSSCS*QQPPPI
Trigger: GATCGGAGGCGGTTGCTGCAAGGAGCAGGAGCTGAC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTTGACCGACGCCTTGTaGAGGTACATGCAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQLTDAL*RYMQFP
Trigger: AGGGAACTGCATGTACCTCAACAAGGCGTCGGTCAA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGTGTTGACCGACGCCTaGTTGAGGTACATGCAGTTC +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQVLTDA*LRYMQF
Trigger: GAACTGCATGTACCTCAACAAGGCGTCGGTCAACAC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAGCAGTGTACCACTGTaGTACTTTCTGCCTCAGCGC +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQSSVPL*YFLPQR
Trigger: GCGCTGAGGCAGAAAGTACAACAGTGGTACACTGCT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGCCGTGTGAATGGTAGTGCCACCTGGAGCAGAACTGTAACTGGGGGTTTTTACTGTTGTGCAAAACAGTaGAAGGAACTACCAGGATTT +
Preference number: 5 (lower is better)
Translates to: SRVNGSATWSRTVTGGFYCCAKQ*KELPGF
Trigger: AAATCCTGGTAGTTCCTTCAACTGTTTTGCACAACA...GTAAAAACCCCCAGTTACAGTTCTGCTCCAGGTGGCACTACCATTCACACGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGCCAGCTCCAAGACCTaGTGGTGGAACAATAAACCG +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQASSKT*WWNNKP
Trigger: CGGTTTATTGTTCCACCACAAGGTCTTGGAGCTGGC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CTCCTGTTTCTTTGGAAAGCCTTCATTAACTTTGGTTCCCATGGCAGCAATTCAGCCAGCTCCAAGACCTaGTGGTGGAACAATAAACCG +
Preference number: 5 (lower is better)
Translates to: LLFLWKAFINFGSHGSNSASSKT*WWNNKP
Trigger: CGGTTTATTGTTCCACCACAAGGTCTTGGAGCTGGC...TGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCCAAAGAAACAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp GGTGTTAATAAGTTACTTACAGAGGTTACAGGCGACAAAGGCTGTGGTCTAGCAACACTGAAGTGCTACTaGGCAGTGGAGGATTACTGG +
Preference number: 5 (lower is better)
Translates to: GVNKLLTEVTGDKGCGLATLKCY*AVEDYW
Trigger: CCAGTAATCCTCCACTGCCAAGTAGCACTTCAGTGT...TGCTAGACCACAGCCTTTGTCGCCTGTAACCTCTGTAAGTAACTTATTAACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCCAAACTTCGCGGTGTaGACCGACGCCTTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNPNFAV*TDALLR
Trigger: CCTCAACAAGGCGTCGGTCAACACCGCGAAGTTTGG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGCTGGCTTTATCGGGCTaGCTTCCGGAGGAGATAAAA +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQLALSG*LPEEIK
Trigger: TTTTATCTCCTCCGGAAGCAAGCCCGATAAAGCCAG...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGCTGAAACTGCATTCTaGGCTTTTCCTGCCTCACTC +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQAETAF*AFPASL
Trigger: GAGTGAGGCAGGAAAAGCCAAGAATGCAGTTTCAGC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp TTCTGGGCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCGGAATCAGTACTATTaGGGGTTGCTCTGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: FWAETPVDVSAGVILIAVRNQYY*GLLWSL
Trigger: AAGACTCCAGAGCAACCCCAAATAGTACTGATTCCG...AACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp TGGTGTGGCAGGTCAATGCTGGCTTTATCGGGCTTGCTTCCGGAGGAGATAAAATTATTTTACCTGGACTaGTTGAAAGGGACGACAATT +
Preference number: 5 (lower is better)
Translates to: WCGRSMLALSGLLPEEIKLFYLD*LKGTTI
Trigger: AATTGTCGTCCCTTTCAACAAGTCCAGGTAAAATAA...TTTTATCTCCTCCGGAAGCAAGCCCGATAAAGCCAGCATTGACCTGCCACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAGCTTCTGGCCCTGTTaGGAGATCCAGTGGTCCACT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSFWPC*EIQWST
Trigger: AGTGGACCACTGGATCTCCAAACAGGGCCAGAAGCT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCCAAACTTCGCGGTGTaGACCGACGCCTTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCPNFAV*TDALLR
Trigger: CCTCAACAAGGCGTCGGTCAACACCGCGAAGTTTGG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTGGTCTCCATACAAGTaGGAGCTGCTTGAGCTAGAA +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQWSPYK*ELLELE
Trigger: TTCTAGCTCAAGCAGCTCCAACTTGTATGGAGACCA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp GCTACTTGGCAGTGGAGGATTACTGGGGCAAATGGCAGAAACCAAAGATGTCTTTTGGAGAAAGCTCTTTaGTGCTGTCATCCACATAAT +
Preference number: 5 (lower is better)
Translates to: ATWQWRITGANGRNQRCLLEKAL*CCHPHN
Trigger: ATTATGTGGATGACAGCACAAAAGAGCTTTCTCCAA...AAGACATCTTTGGTTTCTGCCATTTGCCCCAGTAATCCTCCACTGCCAAGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp GGTGTTAATAAGTTACTTACAGAGGTTACAGGCGACAAAGGCTGTGGTCTAGCAACCCATTTAGTGTTGTaGTTGATGACAGAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: GVNKLLTEVTGDKGCGLATHLVL*LMTEAD
Trigger: GTCAGCCTCTGTCATCAACAACAACACTAAATGGGT...TGCTAGACCACAGCCTTTGTCGCCTGTAACCTCTGTAAGTAACTTATTAACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGCGGAATCAGTACTATTaGGGGTTGCTCTGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQRNQYY*GLLWSL
Trigger: AAGACTCCAGAGCAACCCCAAATAGTACTGATTCCG...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp TTCAGAGCGATACTGAGGGTGCTCTCATTTCTCTGTGGAAAAGGCTCTCCTCACGGACGACAATTCAGTTaGAGGTTTATTTGTGTTTAC +
Preference number: 5 (lower is better)
Translates to: FRAILRVLSFLCGKGSPHGRQFS*RFICVY
Trigger: GTAAACACAAATAAACCTCAAACTGAATTGTCGTCC...GTGAGGAGAGCCTTTTCCACAGAGAAATGAGAGCACCCTCAGTATCGCTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR CAA 90 bp GTTTGGCTAAAAGGTGAAAGACTAGATGTAGTAGTTGTTCCAGCTACAGGTGAAACTAGACTAGTTACATaGGATGGTGCCGAAGCCGTG +
Preference number: 5 (lower is better)
Translates to: VWLKGERLDVVVVPATGETRLVT*DGAEAV
Trigger: CACGGCTTCGGCACCATCCAATGTAACTAGTCTAGT...TTCACCTGTAGCTGGAACAACTACTACATCTAGTCTTTCACCTTTTAGCCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGATCAGGATTTTCAGTTaGCCCTACAGCAGTGTACCA +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQIRIFS*PYSSVP
Trigger: TGGTACACTGCTGTAGGGCAAACTGAAAATCCTGAT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGTTAGTTTGAGTTTCTaGTGGCTCTGTAGTGACTGC +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQVSLSF*WLCSDC
Trigger: GCAGTCACTACAGAGCCACAAGAAACTCAAACTAAC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp GCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCCATTGAAGCCTTCATTAACTTaGGTTCCCATGGCAGCAATT +
Preference number: 5 (lower is better)
Translates to: AETPVDVSAGVILIAVPLKPSLT*VPMAAI
Trigger: AATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTT...CAATGGAACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGACTTTGCCTTCTTCCTaGGAGAAAGCTCTTTTGTGC +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQTLPSS*EKALLC
Trigger: GCACAAAAGAGCTTTCTCCAAGGAAGAAGGCAAAGT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAAAGGACCTTTTGTATaGGTGTGGCAGGTCAATGCT +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQKGPFV*VWQVNA
Trigger: AGCATTGACCTGCCACACCAATACAAAAGGTCCTTT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp GGTGTTAATAAGTTACTTACAGAGGTTACAGGCGACAAAGGCTGTGGTCTAGCATGGCCACAGGGCATTTaGTATACCATTTGTAAAGGA +
Preference number: 5 (lower is better)
Translates to: GVNKLLTEVTGDKGCGLAWPQGI*YTICKG
Trigger: TCCTTTACAAATGGTATACAAAATGCCCTGTGGCCA...TGCTAGACCACAGCCTTTGTCGCCTGTAACCTCTGTAAGTAACTTATTAACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTATTTTGAAGATCTATaGGCAACCACTGGCCACAGG +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQYFEDL*ATTGHR
Trigger: CCTGTGGCCAGTGGTTGCCAATAGATCTTCAAAATA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGTGGTGGCACTTCTTTaGCAACTGCTTTTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQVVALL*QLLFLL
Trigger: AAGAAGGAAAAGCAGTTGCAAAAGAAGTGCCACCAC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CATAAGTTTCTGAACTGGAGTCCCACTGATTACATCTCCATTTGTTGCTGCTGTCATTTAGTGTTGTTGTaGATGACAGAGGCTGACCTG +
Preference number: 5 (lower is better)
Translates to: HKFLNWSPTDYISICCCCHLVLL*MTEADL
Trigger: CAGGTCAGCCTCTGTCATCAACAACAACACTAAATG...ACAGCAGCAACAAATGGAGATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp TTCTGGGCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTCACTTACCGAACTACTaGTTGTTGATGGTAGTAGAG +
Preference number: 5 (lower is better)
Translates to: FWAETPVDVSAGVILIAVHLPNY*LLMVVE
Trigger: CTCTACTACCATCAACAACAAGTAGTTCGGTAAGTG...AACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGCCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp AGATTGTCTTTTAGAAATAGATACAGAACGTGTGGCTCCTGGTACTGCTGCCGACAGTGTTTCCGAGACTaGATGAGCAAAGTCTATTTG +
Preference number: 5 (lower is better)
Translates to: RLSFRNRYRTCGSWYCCRQCFRD*MSKVYL
Trigger: CAAATAGACTTTGCTCATCAAGTCTCGGAAACACTG...TCGGCAGCAGTACCAGGAGCCACACGTTCTGTATCTATTTCTAAAAGACAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGCCAGCTCCAAGACCTaGTGGTGGAACAATAAACCG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNASSKT*WWNNKP
Trigger: CGGTTTATTGTTCCACCACAAGGTCTTGGAGCTGGC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp TTCTGGGCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTATCTATTGGTGTAGATaGAATGCCTTGGCCACTGTT +
Preference number: 5 (lower is better)
Translates to: FWAETPVDVSAGVILIAVIYWCR*NALATV
Trigger: AACAGTGGCCAAGGCATTCAATCTACACCAATAGAT...AACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGCCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS CCA 90 bp AATCCGAGGTACTCTTTGTATTTTAATGGGTGGAATTGGAAATTCTaGGGCCTGAAAGGGTCTCTGTTTATAAATCCGTACATCTGCACC +
Preference number: 5 (lower is better)
Translates to: NPRYSLYFNGWNWKF*GLKGSLFINPYICT
Trigger: GGTGCAGATGTACGGATTTATAAACAGAGACCCTTTCAGGCCCCAGAATTTCCAATTCCACCCATTAAAATACAAAGAGTACCTCGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTTGACCGACGCCTTGTaGAGGTACATGCAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCLTDAL*RYMQFP
Trigger: AGGGAACTGCATGTACCTCAACAAGGCGTCGGTCAA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAAGCCTTCATTAACTTaGGTTCCCATGGCAGCAATT +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQKPSLT*VPMAAI
Trigger: AATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp TTAATTACTGAAGTCAGTGATACTGTTGGTACAGGAGGTGGAACAGGAACCTTAACTTTGCCTTCTTCCTaGGAGAAAGCTCTTTTGTGC +
Preference number: 5 (lower is better)
Translates to: LITEVSDTVGTGGGTGTLTLPSS*EKALLC
Trigger: GCACAAAAGAGCTTTCTCCAAGGAAGAAGGCAAAGT...TAAGGTTCCTGTTCCACCTCCTGTACCAACAGTATCACTGACTTCAGTAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCTGGCTTTATCGGGCTaGCTTCCGGAGGAGATAAAA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNLALSG*LPEEIK
Trigger: TTTTATCTCCTCCGGAAGCAAGCCCGATAAAGCCAG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGCTGAAACTGCATTCTaGGCTTTTCCTGCCTCACTC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNAETAF*AFPASL
Trigger: GAGTGAGGCAGGAAAAGCCAAGAATGCAGTTTCAGC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTTTTCAGCTCTTGCTTaGCTTCAGAAGAATCAGCAG +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQFSALA*LQKNQQ
Trigger: CTGCTGATTCTTCTGAAGCAAAGCAAGAGCTGAAAA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp TGTGGAACTGTGTTTATTATTTTAGGGGATGTAGTCGCAGGTGTAGGTAAGGCATTTTCAGCTCTTGCTTaGCTTCAGAAGAATCAGCAG +
Preference number: 5 (lower is better)
Translates to: CGTVFIILGDVVAGVGKAFSALA*LQKNQQ
Trigger: CTGCTGATTCTTCTGAAGCAAAGCAAGAGCTGAAAA...TGCCTTACCTACACCTGCGACTACATCCCCTAAAATAATAAACACAGTTCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp TGTGGAACTGTGTTTATTATTTTAGGGGATGTAGTCGCAGGTGTAGGTAAGGCACACAGTTTTCAGCTCTaGCTTTGCTTCAGAAGAATC +
Preference number: 5 (lower is better)
Translates to: CGTVFIILGDVVAGVGKAHSFQL*LCFRRI
Trigger: GATTCTTCTGAAGCAAAGCAAGAGCTGAAAACTGTG...TGCCTTACCTACACCTGCGACTACATCCCCTAAAATAATAAACACAGTTCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGCAGAGGAAGAAGTTGTaGATTTTGGCACCAGAAATG +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQQRKKL*ILAPEM
Trigger: CATTTCTGGTGCCAAAATCAACAACTTCTTCCTCTG...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGCAGTACTATTTGGGGTaGCTCTGGAGTCTTAACATA +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQQYYLG*LWSLNI
Trigger: TATGTTAAGACTCCAGAGCAACCCCAAATAGTACTG...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CTCCTGTTTCTTTGGAAAGCCTTCATTAACTTTGGTTCCCATGGCAGCAATTCACAGTACTATTTGGGGTaGCTCTGGAGTCTTAACATA +
Preference number: 5 (lower is better)
Translates to: LLFLWKAFINFGSHGSNSQYYLG*LWSLNI
Trigger: TATGTTAAGACTCCAGAGCAACCCCAAATAGTACTG...TGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCCAAAGAAACAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGCAGTGTTTCCGAGACTaGATGAGCAAAGTCTATTTG +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQQCFRD*MSKVYL
Trigger: CAAATAGACTTTGCTCATCAAGTCTCGGAAACACTG...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTTTTACCTGGACTTGTaGAAAGGGACGACAATTCAG +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQFYLDL*KGTTIQ
Trigger: CTGAATTGTCGTCCCTTTCAACAAGTCCAGGTAAAA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp TGTGGAACTGTGTTTATTATTTTAGGGGATGTAGTCGCAGGTGTAGGTAAGGCACTAAAGCTTGCTGATTaGGCAGAGAAGCAAAATTGG +
Preference number: 5 (lower is better)
Translates to: CGTVFIILGDVVAGVGKALKLAD*AEKQNW
Trigger: CCAATTTTGCTTCTCTGCCAAATCAGCAAGCTTTAG...TGCCTTACCTACACCTGCGACTACATCCCCTAAAATAATAAACACAGTTCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATACTAGACTAGTTACATaGGATGGTGCCGAAGCCGTG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNTRLVT*DGAEAV
Trigger: CACGGCTTCGGCACCATCCAATGTAACTAGTCTAGT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCAAAGTCAGTGATACTGTaGGTACAGGAGGTGGAACAG +
Preference number: 5 (lower is better)
Translates to: DSQNLSLLELNYHLLTMAKSVIL*VQEVEQ
Trigger: CTGTTCCACCTCCTGTACCAACAGTATCACTGACTT...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTTTAAACACAGAACCTaGAAACCCTCCTCAGAACAG +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQFKHRT*KPSSEQ
Trigger: CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTCCTTTTTCAACAGCTaGCTTCTAGCCATAGGAAAA +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQSFFNS*LLAIGK
Trigger: TTTTCCTATGGCTAGAAGCAAGCTGTTGAAAAAGGA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CTCCTGTTTCTTTGGAAAGCCTTCATTAACTTTGGTTCCCATGGCAGCAATTCATCCTTTTTCAACAGCTaGCTTCTAGCCATAGGAAAA +
Preference number: 5 (lower is better)
Translates to: LLFLWKAFINFGSHGSNSSFFNS*LLAIGK
Trigger: TTTTCCTATGGCTAGAAGCAAGCTGTTGAAAAAGGA...TGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCCAAAGAAACAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTATTCCCAATATTCTTaGCAAGCAAAGCCTGAATGG +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQYSQYS*QAKPEW
Trigger: CCATTCAGGCTTTGCTTGCAAAGAATATTGGGAATA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp GGAAAGCCTTCATTAACTTTGGTTCCCATGGCAGCAATTCATTTAAAAGACGTAGTGGTGGCACTTCTTTaGCAACTGCTTTTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: GKPSLTLVPMAAIHLKDVVVALL*QLLFLL
Trigger: AAGAAGGAAAAGCAGTTGCAAAAGAAGTGCCACCAC...TACGTCTTTTAAATGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGTTACCGAACTACTTGTaGTTGATGGTAGTAGAGTAC +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQLPNYL*LMVVEY
Trigger: GTACTCTACTACCATCAACAACAAGTAGTTCGGTAA...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCGGAATCAGTACTATTaGGGGTTGCTCTGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNRNQYY*GLLWSL
Trigger: AAGACTCCAGAGCAACCCCAAATAGTACTGATTCCG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp TTCTGGGCAGAAACACCTGTAGATGTCAGCGCAGGTGTCATATTAATTGCAGTTGGACGACAATTCAGTTaGAGGTTTATTTGTGTTTAC +
Preference number: 5 (lower is better)
Translates to: FWAETPVDVSAGVILIAVGRQFS*RFICVY
Trigger: GTAAACACAAATAAACCTCAAACTGAATTGTCGTCC...AACTGCAATTAATATGACACCTGCGCTGACATCTACAGGTGTTTCTGCCCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAAGTCAGTGATACTGTaGGTACAGGAGGTGGAACAG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNKSVIL*VQEVEQ
Trigger: CTGTTCCACCTCCTGTACCAACAGTATCACTGACTT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTACACTGAAGTGCTACTaGGCAGTGGAGGATTACTGG +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCTLKCY*AVEDYW
Trigger: CCAGTAATCCTCCACTGCCAAGTAGCACTTCAGTGT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS TCA 90 bp ATAACTTCCCTGCATTCATGGATAGGCTGTCCAAGTACAGCATCTTaGACTTCCTTTTGTGTTTCATACACAAAGTCACAAAGACCCTTA +
Preference number: 5 (lower is better)
Translates to: ITSLHSWIGCPSTAS*TSFCVSYTKSQRPL
Trigger: TAAGGGTCTTTGTGACTTTGTGTATGAAACACAAAAGGAAGTTCAAGATGCTGTACTTGGACAGCCTATCCATGAATGCAGGGAAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS TCA 90 bp GGACTGGGTTCAATCTTTATTCTGGAAGCTTCACCGTATTTTTCCTaGTTTTCTATAAACCTTATTTCACCTGGACTAAGAGGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: GLGSIFILEASPYFS*FSINLISPGLRGSP
Trigger: TGGAGAGCCTCTTAGTCCAGGTGAAATAAGGTTTATAGAAAATCAGGAAAAATACGGTGAAGCTTCCAGAATAAAGATTGAACCCAGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS GCA 90 bp AAATTCTGGGGCCTGAAAGGGTCTCTGTTTATAAATCCGTACATCTaGACCACAGAACTGTGGAAAATGTACATAAGCATTCTCCAAATA +
Preference number: 5 (lower is better)
Translates to: KFWGLKGSLFINPYI*TTELWKMYISILQI
Trigger: TATTTGGAGAATGCTTATGTACATTTTCCACAGTTCTGTGGTGCAGATGTACGGATTTATAAACAGAGACCCTTTCAGGCCCCAGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS CCA 90 bp CTCCAATTTAATCCGAGGTACTCTTTGTATTTTAATGGGTGGAATTaGAAATTCTGGGGCCTGAAAGGGTCTCTGTTTATAAATCCGTAC +
Preference number: 5 (lower is better)
Translates to: LQFNPRYSLYFNGWN*KFWGLKGSLFINPY
Trigger: GTACGGATTTATAAACAGAGACCCTTTCAGGCCCCAGAATTTCCAATTCCACCCATTAAAATACAAAGAGTACCTCGGATTAAATTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTGGTCTCCATACAAGTaGGAGCTGCTTGAGCTAGAA +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCWSPYK*ELLELE
Trigger: TTCTAGCTCAAGCAGCTCCAACTTGTATGGAGACCA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGAATCCGAGGTACTCTTaGTATTTTAATGGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQNPRYS*YFNGWN
Trigger: ATTCCACCCATTAAAATACAAAGAGTACCTCGGATT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGTTAGTTTGAGTTTCTaGTGGCTCTGTAGTGACTGC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNVSLSF*WLCSDC
Trigger: GCAGTCACTACAGAGCCACAAGAAACTCAAACTAAC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGCTCATTTTAGTTAGTTaGAGTTTCTTGTGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQLILVS*SFLWLC
Trigger: ACAGAGCCACAAGAAACTCAAACTAACTAAAATGAG...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CTCCTGTTTCTTTGGAAAGCCTTCATTAACTTTGGTTCCCATGGCAGCAATTCATCTTCGGTAAGTCTTTaGAAGGCAATTCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: LLFLWKAFINFGSHGSNSSSVSL*KAIPFS
Trigger: TGAAAAAGGAATTGCCTTCAAAAGACTTACCGAAGA...TGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCCAAAGAAACAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGATCCACATAATCAGTTaGTTTGGACTGTCGTTTAAG +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQIHIIS*FGLSFK
Trigger: CTTAAACGACAGTCCAAACAAACTGATTATGTGGAT...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CATAAGTTTCTGAACTGGAGTCCCACTGATTACATCTCCATTTGTTGCTGCTGTATCCACATAATCAGTTaGTTTGGACTGTCGTTTAAG +
Preference number: 5 (lower is better)
Translates to: HKFLNWSPTDYISICCCCIHIIS*FGLSFK
Trigger: CTTAAACGACAGTCCAAACAAACTGATTATGTGGAT...ACAGCAGCAACAAATGGAGATGTAATCAGTGGGACTCCAGTTCAGAAACTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATACTTTGCCTTCTTCCTaGGAGAAAGCTCTTTTGTGC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNTLPSS*EKALLC
Trigger: GCACAAAAGAGCTTTCTCCAAGGAAGAAGGCAAAGT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp TTAGGAGACACTACTGGTTGTGTAGTTGAAATCAGAACAGATGATGCAAGGTGTTATTCCCAATATTCTTaGCAAGCAAAGCCTGAATGG +
Preference number: 5 (lower is better)
Translates to: LGDTTGCVVEIRTDDARCYSQYS*QAKPEW
Trigger: CCATTCAGGCTTTGCTTGCAAAGAATATTGGGAATA...ACACCTTGCATCATCTGTTCTGATTTCAACTACACAACCAGTAGTGTCTCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAAAGGACCTTTTGTATaGGTGTGGCAGGTCAATGCT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNKGPFV*VWQVNA
Trigger: AGCATTGACCTGCCACACCAATACAAAAGGTCCTTT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCATTTAGTGTTGTTGTaGATGACAGAGGCTGACCTG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNHLVLL*MTEADL
Trigger: CAGGTCAGCCTCTGTCATCAACAACAACACTAAATG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATACCCATTTAGTGTTGTaGTTGATGACAGAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNTHLVL*LMTEAD
Trigger: GTCAGCCTCTGTCATCAACAACAACACTAAATGGGT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGCTGAATTACCACTTGTaGACAATGGCAAAATATAGC +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQLNYHL*TMAKYS
Trigger: GCTATATTTTGCCATTGTCAACAAGTGGTAATTCAG...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AGACAGGTAAATCCTGACTTTAAACACAGAACCTTGAAACCCTCCTCAGAACAGGGACGACAATTCAGTTaGAGGTTTATTTGTGTTTAC +
Preference number: 5 (lower is better)
Translates to: RQVNPDFKHRTLKPSSEQGRQFS*RFICVY
Trigger: GTAAACACAAATAAACCTCAAACTGAATTGTCGTCC...CTGTTCTGAGGAGGGTTTCAAGGTTCTGTGTTTAAAGTCAGGATTTACCTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCATTTTACCTGGACTTGTaGAAAGGGACGACAATTCAG +
Preference number: 5 (lower is better)
Translates to: DSQNLSLLELNYHLLTMAFYLDL*KGTTIQ
Trigger: CTGAATTGTCGTCCCTTTCAACAAGTCCAGGTAAAA...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAAGTCAGTGATACTGTaGGTACAGGAGGTGGAACAG +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCKSVIL*VQEVEQ
Trigger: CTGTTCCACCTCCTGTACCAACAGTATCACTGACTT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGATTCTTCTGCATTGTaGCTAACAGTTCACTGGTCC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNDSSAL*LTVHWS
Trigger: GGACCAGTGAACTGTTAGCAACAATGCAGAAGAATC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATATTCAAAAACTCCACTaGTCAAGCCTGCCAAACTTC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNIQKLH*SSLPNF
Trigger: GAAGTTTGGCAGGCTTGACAAGTGGAGTTTTTGAAT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTATCAGGATTTTCAGTTaGCCCTACAGCAGTGTACCA +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCIRIFS*PYSSVP
Trigger: TGGTACACTGCTGTAGGGCAAACTGAAAATCCTGAT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCACATTTGTGCTTAACTTaGCCTTCTTCCTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: DSQNLSLLELNYHLLTMAHLCLT*PSSLEK
Trigger: TTTCTCCAAGGAAGAAGGCAAAGTTAAGCACAAATG...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp GGAAAGCCTTCATTAACTTTGGTTCCCATGGCAGCAATTCATTTAAAAGACGTAAAGGAGGCAGTTGATTaGTTAAGGTCACTTTATTCC +
Preference number: 5 (lower is better)
Translates to: GKPSLTLVPMAAIHLKDVKEAVD*LRSLYS
Trigger: GGAATAAAGTGACCTTAACAAATCAACTGCCTCCTT...TACGTCTTTTAAATGAATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTTGTAAAGGACCTTTaGTATTGGTGTGGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNFVKDL*YWCGRS
Trigger: TGACCTGCCACACCAATACAAAAGGTCCTTTACAAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTGGCCACAGGGCATTTaGTATACCATTTGTAAAGGA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNWPQGI*YTICKG
Trigger: TCCTTTACAAATGGTATACAAAATGCCCTGTGGCCA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp TTAATTACTGAAGTCAGTGATACTGTTGGTACAGGAGGTGGAACAGGAACCTTACTTTACAGAGCTATTTaGAAGATCTATTGGCAACCA +
Preference number: 5 (lower is better)
Translates to: LITEVSDTVGTGGGTGTLLYRAI*KIYWQP
Trigger: TGGTTGCCAATAGATCTTCAAAATAGCTCTGTAAAG...TAAGGTTCCTGTTCCACCTCCTGTACCAACAGTATCACTGACTTCAGTAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTGTGGTGGCACTTCTTTaGCAACTGCTTTTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCVVALL*QLLFLL
Trigger: AAGAAGGAAAAGCAGTTGCAAAAGAAGTGCCACCAC...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp TTCTTAGAGGATGTTGTAGAGGTTGGCCACTTAAGGAATTATTTGATGCTAGTGACAGTTCCTGGTGAGTaGACAAAAACTGATGCTAAA +
Preference number: 5 (lower is better)
Translates to: FLEDVVEVGHLRNYLMLVTVPGE*TKTDAK
Trigger: TTTAGCATCAGTTTTTGTCAACTCACCAGGAACTGT...CACTAGCATCAAATAATTCCTTAAGTGGCCAACCTCTACAACATCCTCTAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTACCCATTTAGTGTTGTaGTTGATGACAGAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCTHLVL*LMTEAD
Trigger: GTCAGCCTCTGTCATCAACAACAACACTAAATGGGT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCACAGTTTTCAGCTCTaGCTTTGCTTCAGAAGAATC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNHSFQL*LCFRRI
Trigger: GATTCTTCTGAAGCAAAGCAAGAGCTGAAAACTGTG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAAGAAGTTGTTGATTTaGGCACCAGAAATGCCTGCA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNKKLLI*APEMPA
Trigger: TGCAGGCATTTCTGGTGCCAAAATCAACAACTTCTT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AAGGAATTATTTGATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTAAAGAAGTTGTTGATTTaGGCACCAGAAATGCCTGCA +
Preference number: 5 (lower is better)
Translates to: KELFDASVIFWAELSIGVKKLLI*APEMPA
Trigger: TGCAGGCATTTCTGGTGCCAAAATCAACAACTTCTT...TACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATCAAATAATTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCAGAGGAAGAAGTTGTaGATTTTGGCACCAGAAATG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNQRKKL*ILAPEM
Trigger: CATTTCTGGTGCCAAAATCAACAACTTCTTCCTCTG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AAGGAATTATTTGATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTACAGAGGAAGAAGTTGTaGATTTTGGCACCAGAAATG +
Preference number: 5 (lower is better)
Translates to: KELFDASVIFWAELSIGVQRKKL*ILAPEM
Trigger: CATTTCTGGTGCCAAAATCAACAACTTCTTCCTCTG...TACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATCAAATAATTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAAGCAGAGGAAGAAGTaGTTGATTTTGGCACCAGAA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNKQRKK*LILAPE
Trigger: TTCTGGTGCCAAAATCAACAACTTCTTCCTCTGCTT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp GACTCACAAAATTTGAGCTTACTGGAACTGAATTACCACTTGTTGACAATGGCATGGCCTAATGTAAGTTaGAGATTTTTCCCCATGGAT +
Preference number: 5 (lower is better)
Translates to: DSQNLSLLELNYHLLTMAWPNVS*RFFPMD
Trigger: ATCCATGGGGAAAAATCTCAAACTTACATTAGGCCA...TGCCATTGTCAACAAGTGGTAATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCACTTACCGAACTACTaGTTGTTGATGGTAGTAGAG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNHLPNY*LLMVVE
Trigger: CTCTACTACCATCAACAACAAGTAGTTCGGTAAGTG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp TTAATTACTGAAGTCAGTGATACTGTTGGTACAGGAGGTGGAACAGGAACCTTATCTGACTCACAAAATTaGAGCTTACTGGAACTGAAT +
Preference number: 5 (lower is better)
Translates to: LITEVSDTVGTGGGTGTLSDSQN*SLLELN
Trigger: ATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTCAGA...TAAGGTTCCTGTTCCACCTCCTGTACCAACAGTATCACTGACTTCAGTAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCTAAAGCTTGCTGATTaGGCAGAGAAGCAAAATTGG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNLKLAD*AEKQNW
Trigger: CCAATTTTGCTTCTCTGCCAAATCAGCAAGCTTTAG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATATCTATTGGTGTAGATaGAATGCCTTGGCCACTGTT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNIYWCR*NALATV
Trigger: AACAGTGGCCAAGGCATTCAATCTACACCAATAGAT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS TCA 90 bp AAGAGAAAGCTCACTGGACTTGTTGAAAGGGACGACAATTCAGTTTaGGGTTTATTTGTGTTTACATTTGTTGGCACTGTAGTTGAAATC +
Preference number: 5 (lower is better)
Translates to: KRKLTGLVERDDNSV*GLFVFTFVGTVVEI
Trigger: GATTTCAACTACAGTGCCAACAAATGTAAACACAAATAAACCTCAAACTGAATTGTCGTCCCTTTCAACAAGTCCAGTGAGCTTTCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436015.6
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTATTCAAAAACTCCACTaGTCAAGCCTGCCAAACTTC +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCIQKLH*SSLPNF
Trigger: GAAGTTTGGCAGGCTTGACAAGTGGAGTTTTTGAAT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTCCAAGTACAGCATCTaGAACTTCCTTTTGTGTTTC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSKYSI*NFLLCF
Trigger: GAAACACAAAAGGAAGTTCAAGATGCTGTACTTGGA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCTTCCCCTGGACTCCTaGGTTTCTCTAAATTTTCTT +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCLPLDS*VSLNFL
Trigger: AAGAAAATTTAGAGAAACCAAGGAGTCCAGGGGAAG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAAGCCTTCATTAACTTaGGTTCCCATGGCAGCAATT +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCKPSLT*VPMAAI
Trigger: AATTGCTGCCATGGGAACCAAAGTTAATGAAGGCTT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTCCTTTTTCAACAGCTaGCTTCTAGCCATAGGAAAA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSFFNS*LLAIGK
Trigger: TTTTCCTATGGCTAGAAGCAAGCTGTTGAAAAAGGA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTGGAGAAAGCTCTTTaGTGCTGTCATCCACATAAT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNLEKAL*CCHPHN
Trigger: ATTATGTGGATGACAGCACAAAAGAGCTTTCTCCAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCATTTGTGCTTAACTTaGCCTTCTTCCTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNHLCLT*PSSLEK
Trigger: TTTCTCCAAGGAAGAAGGCAAAGTTAAGCACAAATG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATAAGGAGGCAGTTGATTaGTTAAGGTCACTTTATTCC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNKEAVD*LRSLYS
Trigger: GGAATAAAGTGACCTTAACAAATCAACTGCCTCCTT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTTTGTAAAGGACCTTTaGTATTGGTGTGGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCFVKDL*YWCGRS
Trigger: TGACCTGCCACACCAATACAAAAGGTCCTTTACAAA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTGGCCACAGGGCATTTaGTATACCATTTGTAAAGGA +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCWPQGI*YTICKG
Trigger: TCCTTTACAAATGGTATACAAAATGCCCTGTGGCCA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTGTTGTGCAAAACAGTaGAAGGAACTACCAGGATTT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNCCAKQ*KELPGF
Trigger: AAATCCTGGTAGTTCCTTCAACTGTTTTGCACAACA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTTTTCAGCTCTTGCTTaGCTTCAGAAGAATCAGCAG +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCFSALA*LQKNQQ
Trigger: CTGCTGATTCTTCTGAAGCAAAGCAAGAGCTGAAAA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAAGAAGTTGTTGATTTaGGCACCAGAAATGCCTGCA +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCKKLLI*APEMPA
Trigger: TGCAGGCATTTCTGGTGCCAAAATCAACAACTTCTT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAAGCAGAGGAAGAAGTaGTTGATTTTGGCACCAGAA +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCKQRKK*LILAPE
Trigger: TTCTGGTGCCAAAATCAACAACTTCTTCCTCTGCTT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTGGCCTAATGTAAGTTaGAGATTTTTCCCCATGGAT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNWPNVS*RFFPMD
Trigger: ATCCATGGGGAAAAATCTCAAACTTACATTAGGCCA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTACCGAACTACTTGTaGTTGATGGTAGTAGAGTAC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNLPNYL*LMVVEY
Trigger: GTACTCTACTACCATCAACAACAAGTAGTTCGGTAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp AAGGAATTATTTGATGCTAGTGTGATCTTCTGGGCAGAGTTATCTATTGGTGTATTACCGAACTACTTGTaGTTGATGGTAGTAGAGTAC +
Preference number: 5 (lower is better)
Translates to: KELFDASVIFWAELSIGVLPNYL*LMVVEY
Trigger: GTACTCTACTACCATCAACAACAAGTAGTTCGGTAA...TACACCAATAGATAACTCTGCCCAGAAGATCACACTAGCATCAAATAATTCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCAGTACTATTTGGGGTaGCTCTGGAGTCTTAACATA +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCQYYLG*LWSLNI
Trigger: TATGTTAAGACTCCAGAGCAACCCCAAATAGTACTG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp TTCTTAGAGGATGTTGTAGAGGTTGGCCACTTAAGGAATTATTTGATGCTAGTGCTGAATTACCACTTGTaGACAATGGCAAAATATAGC +
Preference number: 5 (lower is better)
Translates to: FLEDVVEVGHLRNYLMLVLNYHL*TMAKYS
Trigger: GCTATATTTTGCCATTGTCAACAAGTGGTAATTCAG...CACTAGCATCAAATAATTCCTTAAGTGGCCAACCTCTACAACATCCTCTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCAGTGTTTCCGAGACTaGATGAGCAAAGTCTATTTG +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCQCFRD*MSKVYL
Trigger: CAAATAGACTTTGCTCATCAAGTCTCGGAAACACTG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTTTTACCTGGACTTGTaGAAAGGGACGACAATTCAG +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCFYLDL*KGTTIQ
Trigger: CTGAATTGTCGTCCCTTTCAACAAGTCCAGGTAAAA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCTAAAGCTTGCTGATTaGGCAGAGAAGCAAAATTGG +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCLKLAD*AEKQNW
Trigger: CCAATTTTGCTTCTCTGCCAAATCAGCAAGCTTTAG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS CCA 90 bp CAATTTCTCCAATTTAATCCGAGGTACTCTTTGTATTTTAATGGGTaGAATTGGAAATTCTGGGGCCTGAAAGGGTCTCTGTTTATAAAT +
Preference number: 5 (lower is better)
Translates to: QFLQFNPRYSLYFNG*NWKFWGLKGSLFIN
Trigger: ATTTATAAACAGAGACCCTTTCAGGCCCCAGAATTTCCAATTCCACCCATTAAAATACAAAGAGTACCTCGGATTAAATTGGAGAAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTCTTCTATTTCCTTTaGACTAGCTTCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNFFYFL*TSFFCF
Trigger: GAAGCAGAAGAAGCTAGTCAAAAGGAAATAGAAGAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATATATCCCTTACAACTTaGTGGCAGTTAATTTCTGGA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNISLTT*WQLISG
Trigger: TCCAGAAATTAACTGCCACAAAGTTGTAAGGGATAT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATATCCACATAATCAGTTaGTTTGGACTGTCGTTTAAG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNIHIIS*FGLSFK
Trigger: CTTAAACGACAGTCCAAACAAACTGATTATGTGGAT...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTTGGAGAAAGCTCTTTaGTGCTGTCATCCACATAAT +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCLEKAL*CCHPHN
Trigger: ATTATGTGGATGACAGCACAAAAGAGCTTTCTCCAA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCATTTGTGCTTAACTTaGCCTTCTTCCTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCHLCLT*PSSLEK
Trigger: TTTCTCCAAGGAAGAAGGCAAAGTTAAGCACAAATG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAAGGAGGCAGTTGATTaGTTAAGGTCACTTTATTCC +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCKEAVD*LRSLYS
Trigger: GGAATAAAGTGACCTTAACAAATCAACTGCCTCCTT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCTTTACAGAGCTATTTaGAAGATCTATTGGCAACCA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNLYRAI*KIYWQP
Trigger: TGGTTGCCAATAGATCTTCAAAATAGCTCTGTAAAG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTACAGTTCCTGGTGAGTaGACAAAAACTGATGCTAAA +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCTVPGE*TKTDAK
Trigger: TTTAGCATCAGTTTTTGTCAACTCACCAGGAACTGT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTGTTGTGCAAAACAGTaGAAGGAACTACCAGGATTT +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCCCAKQ*KELPGF
Trigger: AAATCCTGGTAGTTCCTTCAACTGTTTTGCACAACA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTGGCCTAATGTAAGTTaGAGATTTTTCCCCATGGAT +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCWPNVS*RFFPMD
Trigger: ATCCATGGGGAAAAATCTCAAACTTACATTAGGCCA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTCTGACTCACAAAATTaGAGCTTACTGGAACTGAAT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNSDSQN*SLLELN
Trigger: ATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTCAGA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATGGACGACAATTCAGTTaGAGGTTTATTTGTGTTTAC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNGRQFS*RFICVY
Trigger: GTAAACACAAATAAACCTCAAACTGAATTGTCGTCC...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATTTATTTTACCTGGACTaGTTGAAAGGGACGACAATT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNLFYLD*LKGTTI
Trigger: AATTGTCGTCCCTTTCAACAAGTCCAGGTAAAATAA...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACAATGTATAGTATGCTTTCAACAGTATAATCAAGAAAACAAAGCCTaGTTGCAAGCTAATGAAAAG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTQCIVCFQQYNQENKA*LQANEK
Trigger: CTTTTCATTAGCTTGCAACAAGGCTTTGTTTTCTTG...ATTATACTGTTGAAAGCATACTATACATTGTGTGTGTGTGTGTGTGTGTGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTAATCCGAGGTACTCTTaGTATTTTAATGGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCNPRYS*YFNGWN
Trigger: ATTCCACCCATTAAAATACAAAGAGTACCTCGGATT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTATATCCCTTACAACTTaGTGGCAGTTAATTTCTGGA +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCISLTT*WQLISG
Trigger: TCCAGAAATTAACTGCCACAAAGTTGTAAGGGATAT...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCTCATTTTAGTTAGTTaGAGTTTCTTGTGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCLILVS*SFLWLC
Trigger: ACAGAGCCACAAGAAACTCAAACTAACTAAAATGAG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTCTTCGGTAAGTCTTTaGAAGGCAATTCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCSSVSL*KAIPFS
Trigger: TGAAAAAGGAATTGCCTTCAAAAGACTTACCGAAGA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCTTTACAGAGCTATTTaGAAGATCTATTGGCAACCA +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCLYRAI*KIYWQP
Trigger: TGGTTGCCAATAGATCTTCAAAATAGCTCTGTAAAG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTCTGAATTACCACTTGTaGACAATGGCAAAATATAGC +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCLNYHL*TMAKYS
Trigger: GCTATATTTTGCCATTGTCAACAAGTGGTAATTCAG...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS-3UTR CAA 90 bp CCATATCATAGATATGCTGCAACAGTCCAAATTCAAGAAGAAACATGTCAATGTTCTGACTCACAAAATTaGAGCTTACTGGAACTGAAT +
Preference number: 5 (lower is better)
Translates to: PYHRYAATVQIQEETCQCSDSQN*SLLELN
Trigger: ATTCAGTTCCAGTAAGCTCAAATTTTGTGAGTCAGA...ACATTGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCATATCTATGATATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS CCA 72 bp TCGTCCGCGTCCTCCAGCGAGGAGGCACTCCTTCCGTaGGCCGGCCCTGAGGTCTGGGCCGCCGCTGCCACC +
Preference number: 6 (lower is better)
Translates to: SSASSSEEALLP*AGPEVWAAAAT
Trigger: GGTGGCAGCGGCGGCCCAGACCTCAGGGCCGGCCCACGGAAGGAGTGCCTCCTCGCTGGAGGACGCGGACGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS GCA 72 bp CCGGCTCCATCGCTCCCGGCGTCCCGGGCACACTCATaGCCCGGCAGGCCTAGGCTGGGCGGTGTGGAACAG +
Preference number: 6 (lower is better)
Translates to: PAPSLPASRAHS*PGRPRLGGVEQ
Trigger: CTGTTCCACACCGCCCAGCCTAGGCCTGCCGGGGCATGAGTGTGCCCGGGACGCCGGGAGCGATGGAGCCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399933.8
ENST00000513355.2
CDS CCA 72 bp CGTCCCGGGCACACTCATGCCCCGGCAGGCCTAGGCTaGGCGGTGTGGAACAGCCGCTCGAGGTGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: RPGHTHAPAGLG*AVWNSRSRCWG
Trigger: CCCCCAGCACCTCGAGCGGCTGTTCCACACCGCCCAGCCTAGGCCTGCCGGGGCATGAGTGTGCCCGGGACG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399933.8
ENST00000513355.2
CDS GCA 72 bp TCTTCCATCTGCAGCAGACACATGCCCTGTCCGGGCTaGTGCGGGAAGGCGCGACCGCCCCGGCCCCCGCTG +
Preference number: 6 (lower is better)
Translates to: SSICSRHMPCPG*CGKARPPRPPL
Trigger: CAGCGGGGGCCGGGGCGGTCGCGCCTTCCCGCAGCAGCCCGGACAGGGCATGTGTCTGCTGCAGATGGAAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS GCA 72 bp GGCCTAGGCTGGGCGGTGTGGAACAGCCGCTCGAGGTaGTGGGGGACGCGTGAGCGCGAGCCGCTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: GLGWAVWNSRSR*WGTREREPLPH
Trigger: GTGAGGAAGCGGCTCGCGCTCACGCGTCCCCCAGCACCTCGAGCGGCTGTTCCACACCGCCCAGCCTAGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399933.8
ENST00000513355.2
CDS CCA 72 bp CTAGGCTGGGCGGTGTGGAACAGCCGCTCGAGGTGCTaGGGGACGCGTGAGCGCGAGCCGCTTCCTCACGGC +
Preference number: 6 (lower is better)
Translates to: LGWAVWNSRSRC*GTREREPLPHG
Trigger: GCCGTGAGGAAGCGGCTCGCGCTCACGCGTCCCCCAGCACCTCGAGCGGCTGTTCCACACCGCCCAGCCTAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399933.8
ENST00000513355.2
CDS CCA 72 bp CACACTCATGCCCCGGCAGGCCTAGGCTGGGCGGTGTaGAACAGCCGCTCGAGGTGCTGGGGGACGCGTGAG +
Preference number: 6 (lower is better)
Translates to: HTHAPAGLGWAV*NSRSRCWGTRE
Trigger: CTCACGCGTCCCCCAGCACCTCGAGCGGCTGTTCCACACCGCCCAGCCTAGGCCTGCCGGGGCATGAGTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399933.8
ENST00000513355.2
CDS GCA 72 bp CGCTGGCGAACTTCTCTTCCATCTGCAGCAGACACATaGCCTGTCCGGGCTGCTGCGGGAAGGCGCGACCGC +
Preference number: 6 (lower is better)
Translates to: RWRTSLPSAADT*PVRAAAGRRDR
Trigger: GCGGTCGCGCCTTCCCGCAGCAGCCCGGACAGGGCATGTGTCTGCTGCAGATGGAAGAGAAGTTCGCCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS GCA 72 bp GGCCCCGGTGCTTCTCCTGCAGGAACTCGCCCAGGATaGGGTAGCCCTGCTGTAGCTCGTAGGTCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: GPGASPAGTRPG*GSPAVARRSAP
Trigger: AGGAGCTGACCTACGAGCTACAGCAGGGCTACCGCATCCTGGGCGAGTTCCTGCAGGAGAAGCACCGGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS CCA 72 bp CTGAAGTCCGCCACGAACTCGGTGATGCCCCCGTACTaGCCGCTGGCGAACTTCTCTTCCATCTGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: LKSATNSVMPPY*PLANFSSICSR
Trigger: TCTGCTGCAGATGGAAGAGAAGTTCGCCAGCGGCCAGTACGGGGGCATCACCGAGTTCGTGGCGGACTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS CAA 72 bp AGCCTGCCAAACTTCGCGGTGTTGACCGACGCCTTGTaGAGGTACATGCAGTTCCCTTCTCATCCTCCAATC +
Preference number: 6 (lower is better)
Translates to: SLPNFAVLTDAL*RYMQFPSHPPI
Trigger: GATTGGAGGATGAGAAGGGAACTGCATGTACCTCAACAAGGCGTCGGTCAACACCGCGAAGTTTGGCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS CAA 72 bp TCAAGCCTGCCAAACTTCGCGGTGTTGACCGACGCCTaGTTGAGGTACATGCAGTTCCCTTCTCATCCTCCA +
Preference number: 6 (lower is better)
Translates to: SSLPNFAVLTDA*LRYMQFPSHPP
Trigger: TGGAGGATGAGAAGGGAACTGCATGTACCTCAACAAGGCGTCGGTCAACACCGCGAAGTTTGGCAGGCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS CAA 72 bp AAACTCCACTTGTCAAGCCTGCCAAACTTCGCGGTGTaGACCGACGCCTTGTTGAGGTACATGCAGTTCCCT +
Preference number: 6 (lower is better)
Translates to: KLHLSSLPNFAV*TDALLRYMQFP
Trigger: AGGGAACTGCATGTACCTCAACAAGGCGTCGGTCAACACCGCGAAGTTTGGCAGGCTTGACAAGTGGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS CAA 90 bp CACTTGTCAAGCCTGCCAAACTTCGCGGTGTTGACCGACGCCTTGTaGAGGTACATGCAGTTCCCTTCTCATCCTCCAATCCATAATAGC +
Preference number: 6 (lower is better)
Translates to: HLSSLPNFAVLTDAL*RYMQFPSHPPIHNS
Trigger: GCTATTATGGATTGGAGGATGAGAAGGGAACTGCATGTACCTCAACAAGGCGTCGGTCAACACCGCGAAGTTTGGCAGGCTTGACAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS CAA 90 bp CTCCACTTGTCAAGCCTGCCAAACTTCGCGGTGTTGACCGACGCCTaGTTGAGGTACATGCAGTTCCCTTCTCATCCTCCAATCCATAAT +
Preference number: 6 (lower is better)
Translates to: LHLSSLPNFAVLTDA*LRYMQFPSHPPIHN
Trigger: ATTATGGATTGGAGGATGAGAAGGGAACTGCATGTACCTCAACAAGGCGTCGGTCAACACCGCGAAGTTTGGCAGGCTTGACAAGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS GCA 72 bp AGCAGTGTACCACTGTTGTACTTTCTGCCTCAGCGCTaGTTCCCAGGTCCTATAAGGCAAAGTAGGTCTTCG +
Preference number: 6 (lower is better)
Translates to: SSVPLLYFLPQR*FPGPIRQSRSS
Trigger: CGAAGACCTACTTTGCCTTATAGGACCTGGGAAGCAGCGCTGAGGCAGAAAGTACAACAGTGGTACACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS GCA 72 bp CTCATCCTCCAATCCATAATAGCCTCTAGATGTAACTaGTATCGTTGTCTTTTCTCTCAAGTGCCGAGAGAG +
Preference number: 6 (lower is better)
Translates to: LILQSIIASRCN*YRCLFSQVPRE
Trigger: CTCTCTCGGCACTTGAGAGAAAAGACAACGATAGCAGTTACATCTAGAGGCTATTATGGATTGGAGGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS GCA 72 bp CCCAGTTTTTCAGCACAGTTATCAGGATTTTCAGTTTaGCCTACAGCAGTGTACCACTGTTGTACTTTCTGC +
Preference number: 6 (lower is better)
Translates to: PSFSAQLSGFSV*PTAVYHCCTFC
Trigger: GCAGAAAGTACAACAGTGGTACACTGCTGTAGGGCAAACTGAAAATCCTGATAACTGTGCTGAAAAACTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS CCA 72 bp ACAACTAAAGAACAACTGCATTCTGCTACAGTAATCTaGGATGGGTATGACAGCACCAGCATAACACTGGCT +
Preference number: 6 (lower is better)
Translates to: TTKEQLHSATVI*DGYDSTSITLA
Trigger: AGCCAGTGTTATGCTGGTGCTGTCATACCCATCCCAGATTACTGTAGCAGAATGCAGTTGTTCTTTAGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540714.1
CDS CCA 72 bp CAATTTAATCCGAGGTACTCTTTGTATTTTAATGGGTaGAATTGGAAATTCTGGGGCCTGAAAGGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: QFNPRYSLYFNG*NWKFWGLKGSL
Trigger: CAGAGACCCTTTCAGGCCCCAGAATTTCCAATTCCACCCATTAAAATACAAAGAGTACCTCGGATTAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS CCA 72 bp AATCCGAGGTACTCTTTGTATTTTAATGGGTGGAATTaGAAATTCTGGGGCCTGAAAGGGTCTCTGTTTATA +
Preference number: 6 (lower is better)
Translates to: NPRYSLYFNGWN*KFWGLKGSLFI
Trigger: TATAAACAGAGACCCTTTCAGGCCCCAGAATTTCCAATTCCACCCATTAAAATACAAAGAGTACCTCGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS CAA 90 bp AACATAGTCACACTTCAATTTCTCCAATTTAATCCGAGGTACTCTTaGTATTTTAATGGGTGGAATTGGAAATTCTGGGGCCTGAAAGGG +
Preference number: 6 (lower is better)
Translates to: NIVTLQFLQFNPRYS*YFNGWNWKFWGLKG
Trigger: CCCTTTCAGGCCCCAGAATTTCCAATTCCACCCATTAAAATACAAAGAGTACCTCGGATTAAATTGGAGAAATTGAAGTGTGACTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS GCA 72 bp TTAGTTAGTTTGAGTTTCTTGTGGCTCTGTAGTGACTaGTCTAATAGAATATCCCTTACAACTTTGTGGCAG +
Preference number: 6 (lower is better)
Translates to: LVSLSFLWLCSD*SNRISLTTLWQ
Trigger: CTGCCACAAAGTTGTAAGGGATATTCTATTAGAGCAGTCACTACAGAGCCACAAGAAACTCAAACTAACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS CCA 72 bp TACTCTTTGTATTTTAATGGGTGGAATTGGAAATTCTaGGGCCTGAAAGGGTCTCTGTTTATAAATCCGTAC +
Preference number: 6 (lower is better)
Translates to: YSLYFNGWNWKF*GLKGSLFINPY
Trigger: GTACGGATTTATAAACAGAGACCCTTTCAGGCCCCAGAATTTCCAATTCCACCCATTAAAATACAAAGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381461.6
ENST00000399933.8
ENST00000513355.2
CDS TCA 72 bp TCAATAACTTATTCTGGATCTCAGGTTTGTAAGACTTaGATGCAAGAGAATGAAGACCTTCACGCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: SITYSGSQVCKT*MQENEDLHAFS
Trigger: AGAGAAAGCGTGAAGGTCTTCATTCTCTTGCATTCAAGTCTTACAAACCTGAGATCCAGAATAAGTTATTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381461.6
ENST00000399933.8
CDS TCA 72 bp ATTAGTGCAAATAAGCTGAAACTCTGGTACAGTAGGTaGCTTTATGACAGTTTTCCTCTTCTTTGTGATTGC +
Preference number: 6 (lower is better)
Translates to: ISANKLKLWYSR*LYDSFPLLCDC
Trigger: GCAATCACAAAGAAGAGGAAAACTGTCATAAAGTCACCTACTGTACCAGAGTTTCAGCTTATTTGCACTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399933.8
ENST00000540714.1