Pregenerated sensors for KIAA2013 (Homo sapiens)
Ensembl gene IDs: ENSG00000116685Ensembl transcript IDs: ENST00000376572.8, ENST00000376576.3
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGGAGGGCTGCCCTGGAAAGCCAGAAGACCATCAATTCACACCTaGATTTCCAGCTTTCCCTTCCTCGTCGTCTCCTCTCAAAACACT | + |
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Preference number: 1 (lower is better) Translates to: RGGLPWKARRPSIHT*ISSFPFLVVSSQNT Trigger: AGTGTTTTGAGAGGAGACGACGAGGAAGGGAAAGCTGGAAATCCAGGTGTGAATTGATGGTCTTCTGGCTTTCCAGGGCAGCCCTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| 3UTR GCA 90 bp | TTATTTTTAAATGCTGAGATTTATGATGCGGGAGGAGGGGAGGGCTaGCCTGGAAAGCCAGAAGACCATCAATTCACACCTGGATTTCCA | + |
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Preference number: 1 (lower is better) Translates to: LFLNAEIYDAGGGEG*PGKPEDHQFTPGFP Trigger: TGGAAATCCAGGTGTGAATTGATGGTCTTCTGGCTTTCCAGGGCAGCCCTCCCCTCCTCCCGCATCATAAATCTCAGCATTTAAAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCCCGGCCCAGCCTCGGGACCGTGGGGCCTCCGAACGCCGAGATGGACATCAACCATCTACAGGGGATaGAAAAGCCATCTAGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: GPGPASGPWGLRTPRWTSTIYRG*KSHLAK Trigger: TTTTGCTAGATGGCTTTTGCATCCCCTGTAGATGGT...TGATGTCCATCTCGGCGTTCGGAGGCCCCACGGTCCCGAGGCTGGGCCGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000376572.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCTCCGAACGCCGAGATGGACATCACCGCCAACACTCACCATCTACAGGGGAGGAAAGTGGAAGGAGTaGGTTCCATTTCAAGTATTT | + |
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Preference number: 2 (lower is better) Translates to: GLRTPRWTSPPTLTIYRGGKWKE*VPFQVF Trigger: AAATACTTGAAATGGAACTCACTCCTTCCACTTTCC...TCCCCTGTAGATGGTGAGTGTTGGCGGTGATGTCCATCTCGGCGTTCGGAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376572.8 |
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| 3UTR CCA 72 bp | CCAGCCTCGGGACCGTGGGGCCTCCGAACGCCGAGATaGACATCACCGCCAACACTCACCATCTACAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: PASGPWGLRTPR*TSPPTLTIYRG Trigger: TCCCCTGTAGATGGTGAGTGTTGGCGGTGATGTCCATCTCGGCGTTCGGAGGCCCCACGGTCCCGAGGCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376572.8 |
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| 3UTR GCA 72 bp | AATGCTGAGATTTATGATGCGGGAGGAGGGGAGGGCTaGCCTGGAAAGCCAGAAGACCATCAATTCACACCT | + |
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Preference number: 3 (lower is better) Translates to: NAEIYDAGGGEG*PGKPEDHQFTP Trigger: AGGTGTGAATTGATGGTCTTCTGGCTTTCCAGGGCAGCCCTCCCCTCCTCCCGCATCATAAATCTCAGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| 3UTR CCA 72 bp | CTGCCCTGGAAAGCCAGAAGACCATCAATTCACACCTaGATTTCCAGCTTTCCCTTCCTCGTCGTCTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: LPWKARRPSIHT*ISSFPFLVVSS Trigger: AGAGGAGACGACGAGGAAGGGAAAGCTGGAAATCCAGGTGTGAATTGATGGTCTTCTGGCTTTCCAGGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS-3UTR CCA 90 bp | GGCCCCGGCCCAGCCTCGGGACCGTGGGGCCTCCGAACGCCGAGATGGACATCACCAGCCTCGGGACCGTaGGGCCTCCGAACGCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: GPGPASGPWGLRTPRWTSPASGP*GLRTPR Trigger: TCTCGGCGTTCGGAGGCCCCACGGTCCCGAGGCTGG...TGATGTCCATCTCGGCGTTCGGAGGCCCCACGGTCCCGAGGCTGGGCCGGGGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376572.8 |
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| CDS-3UTR TCA 90 bp | GGCCCCGGCCCAGCCTCGGGACCGTGGGGCCTCCGAACGCCGAGATGGACATCAGTGCAAACCCGAGGATaGCAGCACAACCCGCACCCT | + |
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Preference number: 4 (lower is better) Translates to: GPGPASGPWGLRTPRWTSVQTRG*QHNPHP Trigger: AGGGTGCGGGTTGTGCTGTCATCCTCGGGTTTGCAC...TGATGTCCATCTCGGCGTTCGGAGGCCCCACGGTCCCGAGGCTGGGCCGGGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376572.8 |
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| CDS-3UTR CCA 90 bp | GACCGTGGGGCCTCCGAACGCCGAGATGGACATCACCGCCAACACTCACCATCTCCTCCTTCTTCTCGGTaGCCTCCAGCCGTCAAACGA | + |
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Preference number: 4 (lower is better) Translates to: DRGASERRDGHHRQHSPSPPSSR*PPAVKR Trigger: TCGTTTGACGGCTGGAGGCCACCGAGAAGAAGGAGG...AGATGGTGAGTGTTGGCGGTGATGTCCATCTCGGCGTTCGGAGGCCCCACGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376572.8 |
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| CDS-3UTR TCA 90 bp | CTTCCTCGTCGTCTCCTCTCAAAACACTTGTGCGCGCTCTCTGGTGTCAAGGGCTCCGAGACACAGGGCTaGGAGCAAGGCCAAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LPRRLLSKHLCALSGVKGSETQG*EQGQGL Trigger: GAGGCCTTGGCCTTGCTCTCAGCCCTGTGTCTCGGA...GCCCTTGACACCAGAGAGCGCGCACAAGTGTTTTGAGAGGAGACGACGAGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS-3UTR TCA 90 bp | CTTCCTCGTCGTCTCCTCTCAAAACACTTGTGCGCGCTCTCTGGTGTCAAGGGCTCTGGTGTCAAGGGCTaGGGGCATCAGGACACCCAT | + |
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Preference number: 4 (lower is better) Translates to: LPRRLLSKHLCALSGVKGSGVKG*GHQDTH Trigger: ATGGGTGTCCTGATGCCCTCAGCCCTTGACACCAGA...GCCCTTGACACCAGAGAGCGCGCACAAGTGTTTTGAGAGGAGACGACGAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS-3UTR GCA 90 bp | TTTCCCTTCCTCGTCGTCTCCTCTCAAAACACTTGTGCGCGCTCTCTGGTGTCAGGAGGAGGGGAGGGCTaGCCTGGAAAGCCAGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: FPFLVVSSQNTCARSLVSGGGEG*PGKPED Trigger: GTCTTCTGGCTTTCCAGGGCAGCCCTCCCCTCCTCC...TGACACCAGAGAGCGCGCACAAGTGTTTTGAGAGGAGACGACGAGGAAGGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS-3UTR CCA 90 bp | GTCGTCTCCTCTCAAAACACTTGTGCGCGCTCTCTGGTGTCAAGGGCTGAGGGCCGGGTTTCGACCAGATaGCGGCTTCCTACCTTACTC | + |
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Preference number: 4 (lower is better) Translates to: VVSSQNTCARSLVSRAEGRVSTR*RLPTLL Trigger: GAGTAAGGTAGGAAGCCGCCATCTGGTCGAAACCCG...GCCCTCAGCCCTTGACACCAGAGAGCGCGCACAAGTGTTTTGAGAGGAGACGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS-3UTR CCA 90 bp | GCTGCCCTGGAAAGCCAGAAGACCATCAATTCACACCTGGATTTCCAGCTTTCCCTTGTGCGCGCTCTCTaGTGTCAAGGGCTGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: AALESQKTINSHLDFQLSLVRAL*CQGLRA Trigger: TGCCCTCAGCCCTTGACACCAGAGAGCGCGCACAAG...GGAAAGCTGGAAATCCAGGTGTGAATTGATGGTCTTCTGGCTTTCCAGGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS-3UTR CCA 90 bp | GCTGCCCTGGAAAGCCAGAAGACCATCAATTCACACCTGGATTTCCAGCTTTCCCCTCCTTCTTCTCGGTaGCCTCCAGCCGTCAAACGA | + |
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Preference number: 4 (lower is better) Translates to: AALESQKTINSHLDFQLSPPSSR*PPAVKR Trigger: TCGTTTGACGGCTGGAGGCCACCGAGAAGAAGGAGG...GGAAAGCTGGAAATCCAGGTGTGAATTGATGGTCTTCTGGCTTTCCAGGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS-3UTR CCA 90 bp | GAGATGGACATCACCGCCAACACTCACCATCTACAGGGGATGCAAAAGCCATCTCTCCGAACGCCGAGATaGACATCACCGCCAACACTC | + |
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Preference number: 4 (lower is better) Translates to: EMDITANTHHLQGMQKPSLRTPR*TSPPTL Trigger: GAGTGTTGGCGGTGATGTCCATCTCGGCGTTCGGAG...AGATGGCTTTTGCATCCCCTGTAGATGGTGAGTGTTGGCGGTGATGTCCATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376572.8 |
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| CDS-3UTR GCA 90 bp | GGCCTCCGAACGCCGAGATGGACATCACCGCCAACACTCACCATCTACAGGGGAACCATCTACAGGGGATaGAAAAGCCATCTAGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: GLRTPRWTSPPTLTIYRGTIYRG*KSHLAK Trigger: TTTTGCTAGATGGCTTTTGCATCCCCTGTAGATGGT...TCCCCTGTAGATGGTGAGTGTTGGCGGTGATGTCCATCTCGGCGTTCGGAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376572.8 |
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| CDS-3UTR GCA 90 bp | CTTTCCCTTCCTCGTCGTCTCCTCTCAAAACACTTGTGCGCGCTCTCTGGTGTCCTCTCAAAACACTTGTaGGCGCTCTCTGGTGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: LSLPRRLLSKHLCALSGVLSKHL*ALSGVK Trigger: CTTGACACCAGAGAGCGCGCACAAGTGTTTTGAGAG...GACACCAGAGAGCGCGCACAAGTGTTTTGAGAGGAGACGACGAGGAAGGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS-3UTR CCA 90 bp | CTTCCTCGTCGTCTCCTCTCAAAACACTTGTGCGCGCTCTCTGGTGTCAAGGGCCCATCAATTCACACCTaGATTTCCAGCTTTCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LPRRLLSKHLCALSGVKGPSIHT*ISSFPF Trigger: GAAGGGAAAGCTGGAAATCCAGGTGTGAATTGATGG...GCCCTTGACACCAGAGAGCGCGCACAAGTGTTTTGAGAGGAGACGACGAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS-3UTR CCA 90 bp | ATTCACACCTGGATTTCCAGCTTTCCCTTCCTCGTCGTCTCCTCTCAAAACACTAGGGGAGGGCTGCCCTaGAAAGCCAGAAGACCATCA | + |
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Preference number: 4 (lower is better) Translates to: IHTWISSFPFLVVSSQNTRGGLP*KARRPS Trigger: TGATGGTCTTCTGGCTTTCCAGGGCAGCCCTCCCCT...AGTGTTTTGAGAGGAGACGACGAGGAAGGGAAAGCTGGAAATCCAGGTGTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS-3UTR GCA 90 bp | TTTCCAGCTTTCCCTTCCTCGTCGTCTCCTCTCAAAACACTTGTGCGCGCTCTCACAATCATAGTTCACTaGAGCCTCAAACTCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: FPAFPSSSSPLKTLVRALTIIVH*SLKLLG Trigger: GCCCAGGAGTTTGAGGCTGCAGTGAACTATGATTGT...GAGAGCGCGCACAAGTGTTTTGAGAGGAGACGACGAGGAAGGGAAAGCTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS-3UTR GCA 90 bp | CTTTCCCTTCCTCGTCGTCTCCTCTCAAAACACTTGTGCGCGCTCTCTGGTGTCTTGCCCCAGCTAGAGTaGAATGACACAATCATAGTT | + |
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Preference number: 4 (lower is better) Translates to: LSLPRRLLSKHLCALSGVLPQLE*NDTIIV Trigger: AACTATGATTGTGTCATTGCACTCTAGCTGGGGCAA...GACACCAGAGAGCGCGCACAAGTGTTTTGAGAGGAGACGACGAGGAAGGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS CCA 90 bp | TTCCCTTCCTCGTCGTCTCCTCTCAAAACACTTGTGCGCGCTCTCTaGTGTCAAGGGCTGAGGGCATCAGGACACCCATTCCTGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: FPSSSSPLKTLVRAL*CQGLRASGHPFLPR Trigger: CCTGGGCAGGAATGGGTGTCCTGATGCCCTCAGCCCTTGACACCAGAGAGCGCGCACAAGTGTTTTGAGAGGAGACGACGAGGAAGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS-3UTR CAA 90 bp | ATTCACACCTGGATTTCCAGCTTTCCCTTCCTCGTCGTCTCCTCTCAAAACACTCTCCTCTCAAAACACTaGTGCGCGCTCTCTGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: IHTWISSFPFLVVSSQNTLLSKH*CALSGV Trigger: GACACCAGAGAGCGCGCACAAGTGTTTTGAGAGGAG...AGTGTTTTGAGAGGAGACGACGAGGAAGGGAAAGCTGGAAATCCAGGTGTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS TCA 72 bp | CCCCTCGCCAGGCTAGCCCCTTCCGAGACACAGGGCTaGGAGCAAGGCCAAGGCCTCGGGTTTCGACCAGAT | + |
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Preference number: 6 (lower is better) Translates to: PLARLAPSETQG*EQGQGLGFRPD Trigger: ATCTGGTCGAAACCCGAGGCCTTGGCCTTGCTCTCAGCCCTGTGTCTCGGAAGGGGCTAGCCTGGCGAGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS TCA 72 bp | TCAAAACACTTGTGCGCGCTCTCTGGTGTCAAGGGCTaGGGGCATCAGGACACCCATTCCTGCCCAGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SKHLCALSGVKG*GHQDTHSCPGL Trigger: GAGGCCTGGGCAGGAATGGGTGTCCTGATGCCCTCAGCCCTTGACACCAGAGAGCGCGCACAAGTGTTTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS CCA 72 bp | CTGAGAGCAAGGCCAAGGCCTCGGGTTTCGACCAGATaGCGGCTTCCTACCTTACTCCTGAAGAGGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LRARPRPRVSTR*RLPTLLLKRGL Trigger: CAAGCCCCTCTTCAGGAGTAAGGTAGGAAGCCGCCATCTGGTCGAAACCCGAGGCCTTGGCCTTGCTCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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| CDS CCA 72 bp | TCGTCGTCTCCTCTCAAAACACTTGTGCGCGCTCTCTaGTGTCAAGGGCTGAGGGCATCAGGACACCCATTC | + |
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Preference number: 6 (lower is better) Translates to: SSSPLKTLVRAL*CQGLRASGHPF Trigger: GAATGGGTGTCCTGATGCCCTCAGCCCTTGACACCAGAGAGCGCGCACAAGTGTTTTGAGAGGAGACGACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376576.3 |
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