RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIAA1958 (Homo sapiens)

Ensembl gene IDs: ENSG00000165185

Ensembl transcript IDs: ENST00000337530.11, ENST00000374244.3, ENST00000536272.5

Found 824 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGGGGAGAGCCGCCAGACCGGGAGGTCACACCTGGTCAGCCCCTaGCTCCAAGGAGCTCCAGCTGCTCCAACCCTGGCTGGCCCGAGC +
Preference number: 1 (lower is better)
Translates to: PGESRQTGRSHLVSP*LQGAPAAPTLAGPS
Trigger: GCTCGGGCCAGCCAGGGTTGGAGCAGCTGGAGCTCCTTGGAGGCAGGGGCTGACCAGGTGTGACCTCCCGGTCTGGCGGCTCTCCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR TCA 90 bp TCCCTTTACAGCAGATATGAAAGGTGCTGTGGACAACAGCTCACCTaGAGGACACCCTATGGGTCCTCTCATAACACCTACAGTACCACC +
Preference number: 1 (lower is better)
Translates to: SLYSRYERCCGQQLT*RTPYGSSHNTYSTT
Trigger: GGTGGTACTGTAGGTGTTATGAGAGGACCCATAGGGTGTCCTTCAGGTGAGCTGTTGTCCACAGCACCTTTCATATCTGCTGTAAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CCA 90 bp AGACGGAGGAACTTCCAGAGATGTTCATTTAGTTATCATACCCCATaGCCTCCTCTTCTCTTAGAAAGGGAGGGCAGCGGTAGGTCACCA +
Preference number: 1 (lower is better)
Translates to: RRRNFQRCSFSYHTP*PPLLLEREGSGRSP
Trigger: TGGTGACCTACCGCTGCCCTCCCTTTCTAAGAGAAGAGGAGGCCATGGGGTATGATAACTAAATGAACATCTCTGGAAGTTCCTCCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR TCA 90 bp TTGCAGAAGTGTAACACGGTTCACCGTGAAGACGATCCATCCCACTaGTGGCACTTTATAGCTAAGCAAAGTGATATCGGCATTTGCCCA +
Preference number: 1 (lower is better)
Translates to: LQKCNTVHREDDPSH*WHFIAKQSDIGICP
Trigger: TGGGCAAATGCCGATATCACTTTGCTTAGCTATAAAGTGCCATCAGTGGGATGGATCGTCTTCACGGTGAACCGTGTTACACTTCTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CCA 90 bp TTGTTAGTCACAGCTGAGCAAGAGGACCCTGGGACAGGTTATACTTaGAATCTACCCAGAAGAGATTGTCTCCATCTCTTTGGGAAGATG +
Preference number: 1 (lower is better)
Translates to: LLVTAEQEDPGTGYT*NLPRRDCLHLFGKM
Trigger: CATCTTCCCAAAGAGATGGAGACAATCTCTTCTGGGTAGATTCCAAGTATAACCTGTCCCAGGGTCCTCTTGCTCAGCTGTGACTAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR TCA 90 bp CAGATAAAACCATTCTATTGCCAGGAAGAAACTGAGCATCAGAGCTaGCGATACTCTACACTCCTGTGTGTTTTCAAGGCCTTCCAGTGC +
Preference number: 1 (lower is better)
Translates to: QIKPFYCQEETEHQS*RYSTLLCVFKAFQC
Trigger: GCACTGGAAGGCCTTGAAAACACACAGGAGTGTAGAGTATCGTCAGCTCTGATGCTCAGTTTCTTCCTGGCAATAGAATGGTTTTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR CCA 90 bp CTTCTAGATTCTAGAATTGAGATTTGGCCTTCTTCTGGGTTTTTCTaGGAAGGTACAAGAAGCTCACTAGGGTCTTCTGTGAGCCGGATG +
Preference number: 1 (lower is better)
Translates to: LLDSRIEIWPSSGFF*EGTRSSLGSSVSRM
Trigger: CATCCGGCTCACAGAAGACCCTAGTGAGCTTCTTGTACCTTCCCAGAAAAACCCAGAAGAAGGCCAAATCTCAATTCTAGAATCTAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR TCA 90 bp TGGTACCGCACTAAACTATATTCAATTGAATCACACCCTTTAAGGTaGCATCCTAGCTTCTGTGCCAGAGTAAGCTTCCAACAGGGAGTC +
Preference number: 1 (lower is better)
Translates to: WYRTKLYSIESHPLR*HPSFCARVSFQQGV
Trigger: GACTCCCTGTTGGAAGCTTACTCTGGCACAGAAGCTAGGATGTCACCTTAAAGGGTGTGATTCAATTGAATATAGTTTAGTGCGGTACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR GCA 90 bp AGGCGCATCAAGCGCAATCTGTCTCCTGGAAATAGGGAACGTGTCTaGCTCTCTCTAGTTTCTAATTGTGAGTGTAATTCAACAAAGTGT +
Preference number: 1 (lower is better)
Translates to: RRIKRNLSPGNRERV*LSLVSNCECNSTKC
Trigger: ACACTTTGTTGAATTACACTCACAATTAGAAACTAGAGAGAGGCAGACACGTTCCCTATTTCCAGGAGACAGATTGCGCTTGATGCGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTaGGAAATTCTGTTATGTCAGAATACACATATCAGACGGAGGAAC +
Preference number: 1 (lower is better)
Translates to: GKLCLKRGQPSSKKS*EILLCQNTHIRRRN
Trigger: GTTCCTCCGTCTGATATGTGTATTCTGACATAACAGAATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR TCA 90 bp CCCAGGGATTTTATGGAACATCAACTAGGTGACAGGCAACACATTTaGGGCAGAGATGATTATTTAGCTGATGAAAAGCCACTACCAACA +
Preference number: 1 (lower is better)
Translates to: PRDFMEHQLGDRQHI*GRDDYLADEKPLPT
Trigger: TGTTGGTAGTGGCTTTTCATCAGCTAAATAATCATCTCTGCCTCAAATGTGTTGCCTGTCACCTAGTTGATGTTCCATAAAATCCCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR GCA 90 bp CCGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTaGGTGTGTGTGTGTAAACACTTATGTATATGTGTTTGTGTGTAT +
Preference number: 1 (lower is better)
Translates to: PLCHFSRLTRLNHIL*VCVCKHLCICVCVY
Trigger: ATACACACAAACACATATACATAAGTGTTTACACACACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR TCA 90 bp AATTCTCTATTGTTTCCTGGCATTTGGTGCTATAGAGCAGAAGTCTaGAGCCAGATGCTCTTTGGTTTTCTTACAGGCAATTTGTTACTT +
Preference number: 1 (lower is better)
Translates to: NSLLFPGIWCYRAEV*SQMLFGFLTGNLLL
Trigger: AAGTAACAAATTGCCTGTAAGAAAACCAAAGAGCATCTGGCTTCAGACTTCTGCTCTATAGCACCAAATGCCAGGAAACAATAGAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR CCA 90 bp GAGTTCTGGACTAACTCTCTAGTCCTGAATCTATTACTTATTGTTTaGCTGATCTTGGATGGGCCCTTTAATATCTCTGGCCTTAAATTT +
Preference number: 1 (lower is better)
Translates to: EFWTNSLVLNLLLIV*LILDGPFNISGLKF
Trigger: AAATTTAAGGCCAGAGATATTAAAGGGCCCATCCAAGATCAGCCAAACAATAAGTAATAGATTCAGGACTAGAGAGTTAGTCCAGAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR TCA 90 bp AGACTACATTGGAGATCATGTAGAGAAAATGAGGTAACTCTTCTTTaGGGTCTTCACTGTTTGCATTCATTGATGCTTAAAGGTAACGTC +
Preference number: 1 (lower is better)
Translates to: RLHWRSCRENEVTLL*GLHCLHSLMLKGNV
Trigger: GACGTTACCTTTAAGCATCAATGAATGCAAACAGTGAAGACCTCAAAGAAGAGTTACCTCATTTTCTCTACATGATCTCCAATGTAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR TCA 90 bp ACCTGCATTCTCCAACTTACAAACTTAAATTCTCCAACTTATCGGTaGGATTTTCAGAATTTTAACTCCTCTGAGCCTAGATTCTCAATA +
Preference number: 1 (lower is better)
Translates to: TCILQLTNLNSPTYR*DFQNFNSSEPRFSI
Trigger: TATTGAGAATCTAGGCTCAGAGGAGTTAAAATTCTGAAAATCTCACCGATAAGTTGGAGAATTTAAGTTTGTAAGTTGGAGAATGCAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR CCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGCAGGTGACAGGGCAGTaGCCGGGCCCCAGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRQVTGQ*PGPSGG
Trigger: GCCCCCACTGGGGCCCGGCCACTGCCCTGTCACCTG...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTGCTCCAACCCTGGCTaGCCCGAGCAGGTGACAGGG +
Preference number: 2 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGCSNPG*PEQVTG
Trigger: CCCTGTCACCTGCTCGGGCCAGCCAGGGTTGGAGCA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CAA 90 bp AGCCGTGGGAGCAGCCCAAGTCCTTGTCAGATGACCAAGTGTCGCTaGAGGATACTCCCCGACACAAGGCTGCCTGCCCTCCAGAACCAC +
Preference number: 2 (lower is better)
Translates to: SRGSSPSPCQMTKCR*RILPDTRLPALQNH
Trigger: GTGGTTCTGGAGGGCAGGCAGCCTTGTGTCGGGGAGTATCCTCAAGCGACACTTGGTCATCTGACAAGGACTTGGGCTGCTCCCACGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CAA 90 bp TGGGGTTCCTACCGCTGCTGGGAGCCGTGGGAGCAGCCCAAGTCCTaGTCAGATGACCAAGTGTCGCTTGAGGATACTCCCCGACACAAG +
Preference number: 2 (lower is better)
Translates to: WGSYRCWEPWEQPKS*SDDQVSLEDTPRHK
Trigger: CTTGTGTCGGGGAGTATCCTCAAGCGACACTTGGTCATCTGACAAGGACTTGGGCTGCTCCCACGGCTCCCAGCAGCGGTAGGAACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGTGCTCCAACCCTGGCTaGCCCGAGCAGGTGACAGGG +
Preference number: 2 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRCSNPG*PEQVTG
Trigger: CCCTGTCACCTGCTCGGGCCAGCCAGGGTTGGAGCA...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR GCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATGGGGTTCCTACCGCTaGTGGGAGCCGTGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILWGSYR*WEPWEQ
Trigger: CTGCTCCCACGGCTCCCAGCAGCGGTAGGAACCCCA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR GCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGTTGCCCAGGCTGGAGTaGAGTGGCATGGTCTCGGCT +
Preference number: 2 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRLPRLE*SGMVSA
Trigger: AGCCGAGACCATGCCACTGCACTCCAGCCTGGGCAA...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTACGCTGCTGGGAGCCGTaGGAGCAGCCCAAGTCCTTG +
Preference number: 2 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILRCWEP*EQPKSL
Trigger: CAAGGACTTGGGCTGCTCCCACGGCTCCCAGCAGCG...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGGGTTCCTACCGCTGCTaGGAGCCGTGGGAGCAGCCC +
Preference number: 2 (lower is better)
Translates to: RFAILAGLPGLTTYCACVGSYRC*EPWEQP
Trigger: GGGCTGCTCCCACGGCTCCCAGCAGCGGTAGGAACC...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGTCCCCGACACAAGGCTaGCTGCCCTCCAGAACCACC +
Preference number: 2 (lower is better)
Translates to: RFAILAGLPGLTTYCACVSPTQG*LPSRTT
Trigger: GGTGGTTCTGGAGGGCAGGCAGCCTTGTGTCGGGGA...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGTCCATCAGATGCCACTaGAGATTCGCCCTCCTGATT +
Preference number: 2 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRSIRCH*RFALLI
Trigger: AATCAGGAGGGCGAATCTTCAGTGGCATCTGATGGA...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR CCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGCCATTCTCACCTCAATaGGGGGAGGGAGAGTTATCT +
Preference number: 2 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRPFSPQ*GEGELS
Trigger: AGATAACTCTCCCTCCCCCCATTGAGGTGAGAATGG...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR TCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGGGAACATCAACTAGGTaGCAGGCAACACATTTGAGG +
Preference number: 2 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRGTSTR*QATHLR
Trigger: CCTCAAATGTGTTGCCTGTCACCTAGTTGATGTTCC...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR GCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGACCAAGGAGCTCCAGCTaGTCCAACCCTGGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRPRSSS*SNPGWP
Trigger: GGGCCAGCCAGGGTTGGAGCAGCTGGAGCTCCTTGG...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR GCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGAATAGGGAACGTGTCTaGCTCTCTCTAGTTTCTAAT +
Preference number: 2 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGNRERV*LSLVSN
Trigger: ATTAGAAACTAGAGAGAGGCAGACACGTTCCCTATT...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR GCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTTTGCCCAGGCTGGAGTaGAGTGGCATGGTCTCGGCT +
Preference number: 2 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEILPRLE*SGMVSA
Trigger: AGCCGAGACCATGCCACTGCACTCCAGCCTGGGCAA...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATCAGGTGACAGGGCAGTaGCCGGGCCCCAGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDQVTGQ*PGPSGG
Trigger: GCCCCCACTGGGGCCCGGCCACTGCCCTGTCACCTG...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGGCTCTCACATGGTGCTaGGAAATAAAACATAGGCAC +
Preference number: 2 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRALTWC*EIKHRH
Trigger: GTGCCTATGTTTTATTTCTCAGCACCATGTGAGAGC...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR TCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGTCCAGTGGTATATGCTaGCCGAATAATGGGATGACA +
Preference number: 2 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRSSGIC*PNNGMT
Trigger: TGTCATCCCATTATTCGGTCAGCATATACCACTGGA...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGAAGTTGACGCACATTTaGATAAACCATCCGAATGAT +
Preference number: 2 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGKLTHI*INHPND
Trigger: ATCATTCGGATGGTTTATCCAAATGTGCGTCAACTT...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR GCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGAATGGTCTCGGCTCACTaGAACCTCCGCCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRMVSAH*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGACCAT...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR CCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATGGTTCCTACCGCTGCTaGGAGCCGTGGGAGCAGCCC +
Preference number: 2 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDGSYRC*EPWEQP
Trigger: GGGCTGCTCCCACGGCTCCCAGCAGCGGTAGGAACC...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGAGGACAACAGCTCACCTaGAGGACACCCTATGGGTCC +
Preference number: 2 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRGQQLT*RTPYGS
Trigger: GGACCCATAGGGTGTCCTTCAGGTGAGCTGTTGTCC...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR CCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATCGCTGCTGGGAGCCGTaGGAGCAGCCCAAGTCCTTG +
Preference number: 2 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDRCWEP*EQPKSL
Trigger: CAAGGACTTGGGCTGCTCCCACGGCTCCCAGCAGCG...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTTCACACCCTTTAAGGTaGCATCCTAGCTTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEISHPLR*HPSFCA
Trigger: GGCACAGAAGCTAGGATGTCACCTTAAAGGGTGTGA...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR GCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCCCAAGGAGCTCCAGCTaGTCCAACCCTGGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCPRSSS*SNPGWP
Trigger: GGGCCAGCCAGGGTTGGAGCAGCTGGAGCTCCTTGG...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR GCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATTCCCCGACACAAGGCTaGCTGCCCTCCAGAACCACC +
Preference number: 2 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDSPTQG*LPSRTT
Trigger: GGTGGTTCTGGAGGGCAGGCAGCCTTGTGTCGGGGA...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR GCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCTGGGGTTCCTACCGCTaGTGGGAGCCGTGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCWGSYR*WEPWEQ
Trigger: CTGCTCCCACGGCTCCCAGCAGCGGTAGGAACCCCA...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCCAGCTGCTCCAACCCTaGCTGGCCCGAGCAGGTGAC +
Preference number: 2 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCQLLQP*LARAGD
Trigger: GTCACCTGCTCGGGCCAGCCAGGGTTGGAGCAGCTG...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGACTCGGAGGACGGCTTTaGCCAAACACATGGACAGGT +
Preference number: 2 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRLGGRL*PNTWTG
Trigger: ACCTGTCCATGTGTTTGGCCAAAGCCGTCCTCCGAG...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR CCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGCTTCTGTCACAGCTTTaGTTAGGTACTTCCATAAAA +
Preference number: 2 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRLLSQL*LGTSIK
Trigger: TTTTATGGAAGTACCTAACCAAAGCTGTGACAGAAG...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR GCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAAACATAGGCACTTCTaGTTCAGGAGGTTTTCACAT +
Preference number: 2 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILKHRHF*FRRFSH
Trigger: ATGTGAAAACCTCCTGAAGCAGAAGTGCCTATGTTT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR GCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATATGGTCTCGGCTCACTaGAACCTCCGCCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDMVSAH*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGACCAT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR GCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTAGGAAAGCTGGAAAATaGCACATGACCAAGGAGACC +
Preference number: 2 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIRKAGK*HMTKET
Trigger: GGTCTCCTTGGTCATGTGGCATTTTCCAGCTTTCCT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTGACCGAATAATGGGATaGCACGAAGAACAGACAGAA +
Preference number: 2 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIDRIMG*HEEQTE
Trigger: TTCTGTCTGTTCTTCGTGTCATCCCATTATTCGGTC...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCCGAAAAGATCCCAGTaGTTCCTAACGGCAATTTCT +
Preference number: 2 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIPKRSQ*FLTAIS
Trigger: AGAAATTGCCGTTAGGAATCACTGGGATCTTTTCGG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCCTTTACAGCAGATATaGAAGGTGCTGTGGACAACA +
Preference number: 2 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIPLQQI*KVLWTT
Trigger: TGTTGTCCACAGCACCTTTCATATCTGCTGTAAAGG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGATCACACCCTTTAAGGTaGCATCCTAGCTTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRSHPLR*HPSFCA
Trigger: GGCACAGAAGCTAGGATGTCACCTTAAAGGGTGTGA...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR GCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTCGACACAAGGCTGCCTaGCCTCCAGAACCACCTTAT +
Preference number: 2 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCRHKAA*PPEPPY
Trigger: ATAAGGTGGTTCTGGAGGGCAGGCAGCCTTGTGTCG...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR GCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTTTAGGCTGCAGGCTTTaGCCAATAGTTCACATAGGT +
Preference number: 2 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEILGCRL*PIVHIG
Trigger: ACCTATGTGAACTATTGGGCAAAGCCTGCAGCCTAA...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAAGTTGACGCACATTTaGATAAACCATCCGAATGAT +
Preference number: 2 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILKLTHI*INHPND
Trigger: ATCATTCGGATGGTTTATCCAAATGTGCGTCAACTT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTACTAGAAATTCCCTCATaGTACAAACTGTCTAGTTCA +
Preference number: 2 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILLEIPS*YKLSSS
Trigger: TGAACTAGACAGTTTGTACCATGAGGGAATTTCTAG...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGAATAGGGAACGTGTCTaGCTCTCTCTAGTTTCTAAT +
Preference number: 2 (lower is better)
Translates to: RFAILAGLPGLTTYCACVNRERV*LSLVSN
Trigger: ATTAGAAACTAGAGAGAGGCAGACACGTTCCCTATT...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGACTTTGGCCAAACACATaGACAGGTGCTTCGCCATTT +
Preference number: 2 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRLWPNT*TGASPF
Trigger: AAATGGCGAAGCACCTGTCCATGTGTTTGGCCAAAG...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR CAA 90 bp AGGCCGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATaGTGCGTGTGTGTGTGTAAACACTTATGTATATGTGTTTGTGTG +
Preference number: 2 (lower is better)
Translates to: RPLCHFSRLTRLNHI*CVCVCKHLCICVCV
Trigger: CACACAAACACATATACATAAGTGTTTACACACACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTGACAGGCAACACATTTaGGGCAGAGATGATTATTTA +
Preference number: 2 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIDRQHI*GRDDYL
Trigger: TAAATAATCATCTCTGCCTCAAATGTGTTGCCTGTC...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGATTTATTGCATGCTTATaGTGTGCCTGGTACCGCACT +
Preference number: 2 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRFIACL*CAWYRT
Trigger: AGTGCGGTACCAGGCACATCATAAGCATGCAATAAA...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR TCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCTGGGTAAACTTTGCCTaGAGCGTGGACAGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: IHMRTSGAFRYVASSHIIWVNFA*SVDSLP
Trigger: AGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACCCA...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR GCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATGCTTACCTGGTGGGGTaGCTAAATCATCGTGTCCCA +
Preference number: 2 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDAYLVG*LNHRVP
Trigger: TGGGACACGATGATTTAGGCACCCCACCAGGTAAGC...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGGAAATGGTTTCAAACTaGATTACCTACCATTATGCG +
Preference number: 2 (lower is better)
Translates to: RFAILAGLPGLTTYCACVEMVSN*ITYHYA
Trigger: CGCATAATGGTAGGTAATGCAGTTTGAAACCATTTC...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR GCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTCCCAGGGGCAACTTGTaGTTCAGTCAACCTGTGAAT +
Preference number: 2 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCPRGNL*FSQPVN
Trigger: ATTCACAGGTTGACTGAAGCACAAGTTGCCCCTGGG...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTATGGGTGGCACACGCTaGCACTTGATGACTGTGTTT +
Preference number: 2 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCMGGTR*HLMTVF
Trigger: AAACACAGTCATCAAGTGCCAGCGTGTGCCACCCAT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTAAGTACCTAGTACAATaGGTGGCACACGCTGGCACT +
Preference number: 2 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCKYLVQ*VAHAGT
Trigger: AGTGCCAGCGTGTGCCACCCATTGTACTAGGTACTT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCCTGGAAAATGCCACATaGCCAAGGAGACCCTTCTGT +
Preference number: 2 (lower is better)
Translates to: ALDLESENLHSPTYKLKFLENAT*PRRPFC
Trigger: ACAGAAGGGTCTCCTTGGTCATGTGGCATTTTCCAG...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR GCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGAGATTCTCCTTTCTCTTaGATTAGGCCAAGAGCAGAA +
Preference number: 2 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRDSPFS*IRPRAE
Trigger: TTCTGCTCTTGGCCTAATGCAAGAGAAAGGAGAATC...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR GCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCCCCAGGGGCAACTTGTaGTTCAGTCAACCTGTGAAT +
Preference number: 2 (lower is better)
Translates to: ALDLESENLHSPTYKLKFPRGNL*FSQPVN
Trigger: ATTCACAGGTTGACTGAAGCACAAGTTGCCCCTGGG...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR GCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTAGCAGATATGAAAGGTaGTGTGGACAACAGCTCACC +
Preference number: 2 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCSRYER*CGQQLT
Trigger: GGTGAGCTGTTGTCCACAGCACCTTTCATATCTGCT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCTAGAAATTCCCTCATaGTACAAACTGTCTAGTTCA +
Preference number: 2 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEILEIPS*YKLSSS
Trigger: TGAACTAGACAGTTTGTACCATGAGGGAATTTCTAG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTGACCGAATAATGGGATaGCACGAAGAACAGACAGAA +
Preference number: 2 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCDRIMG*HEEQTE
Trigger: TTCTGTCTGTTCTTCGTGTCATCCCATTATTCGGTC...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTAAAGATTACAACCTCTaGAGTAGTTATTGCTACCTT +
Preference number: 2 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIKDYNL*SSYCYL
Trigger: AAGGTAGCAATAACTACTCCAGAGGTTGTAATCTTT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATAGGTTTAGAGCTGACTaGAAGCCAGAACAACTGCCT +
Preference number: 2 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDRFRAD*KPEQLP
Trigger: AGGCAGTTGTTCTGGCTTCCAGTCAGCTCTAAACCT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CAA 90 bp TGTTCTTCCTTCACTTGTTTTTGCTTATATCTGAGGTATCAGAGCTaGGCTGTGTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACT +
Preference number: 2 (lower is better)
Translates to: CSSFTCFCLYLRYQS*AVLEVEFMGENVLT
Trigger: AGTTAACACATTTTCGCCCATGAATTCTACCTCCAACACAGCCAAGCTCTGATACCTCAGATATAAGCAAAAACAAGTGAAGGAAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATCCGAAAAGATCCCAGTaGTTCCTAACGGCAATTTCT +
Preference number: 2 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDPKRSQ*FLTAIS
Trigger: AGAAATTGCCGTTAGGAATCACTGGGATCTTTTCGG...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATCCTTTACAGCAGATATaGAAGGTGCTGTGGACAACA +
Preference number: 2 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDPLQQI*KVLWTT
Trigger: TGTTGTCCACAGCACCTTTCATATCTGCTGTAAAGG...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATTTTATTGCATGCTTATaGTGTGCCTGGTACCGCACT +
Preference number: 2 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDFIACL*CAWYRT
Trigger: AGTGCGGTACCAGGCACATCATAAGCATGCAATAAA...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGAGTATGGCTTGAGAGATaGAATATTTGCCAAACAAAC +
Preference number: 2 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRVWLER*NICQTN
Trigger: GTTTGTTTGGCAAATATTTCATCTCTCAAGCCATAC...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR GCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTGATTCTCCTTTCTCTTaGATTAGGCCAAGAGCAGAA +
Preference number: 2 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCDSPFS*IRPRAE
Trigger: TTCTGCTCTTGGCCTAATGCAAGAGAAAGGAGAATC...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTCGTGTCCCAAGTATTaGTGCCATCCTAAAATGATG +
Preference number: 2 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCSCPKY*CHPKMM
Trigger: CATCATTTTAGGATGGCACCAATACTTGGGACACGA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCGCTCTCACATGGTGCTaGGAAATAAAACATAGGCAC +
Preference number: 2 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCALTWC*EIKHRH
Trigger: GTGCCTATGTTTTATTTCTCAGCACCATGTGAGAGC...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTGACAGGCAACACATTTaGGGCAGAGATGATTATTTA +
Preference number: 2 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCDRQHI*GRDDYL
Trigger: TAAATAATCATCTCTGCCTCAAATGTGTTGCCTGTC...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATTCACAGACACCCTTCTaGTGCGTGAATCTTTTATCA +
Preference number: 2 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDSQTPF*CVNLLS
Trigger: TGATAAAAGATTCACGCACCAGAAGGGTGTCTGTGA...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTGCATTTTACCTGAGTaGAATGGTTTCAAACTGCAT +
Preference number: 2 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCCILPE*NGFKLH
Trigger: ATGCAGTTTGAAACCATTTCACTCAGGTAAAATGCA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR GCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATAAACATAGGCACTTCTaGTTCAGGAGGTTTTCACAT +
Preference number: 2 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDKHRHF*FRRFSH
Trigger: ATGTGAAAACCTCCTGAAGCAGAAGTGCCTATGTTT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR GCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCAAACAGCTTTTAGGCTaGTCAGACACAGTTCTTTCA +
Preference number: 2 (lower is better)
Translates to: IHMRTSGAFRYVASSHIIKQLLG*SDTVLS
Trigger: TGAAAGAACTGTGTCTGAGCAGCCTAAAAGCTGTTT...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR GCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCCTGGCTAACATTTATTaGATGCTTATGATGTGCCTG +
Preference number: 2 (lower is better)
Translates to: IHMRTSGAFRYVASSHIILANIY*MLMMCL
Trigger: CAGGCACATCATAAGCATGCAATAAATGTTAGCCAG...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR GCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCTCAAGTACAGCAAGATaGTTCCGTTTCTACAAGAGT +
Preference number: 2 (lower is better)
Translates to: ALDLESENLHSPTYKLKFSSTAR*FRFYKS
Trigger: ACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGA...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR CCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATAAACCCAAAGGTAAGTaGAGAAAACGCTCTTTACCT +
Preference number: 2 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDKPKGK*RKRSLP
Trigger: AGGTAAAGAGCGTTTTCTCCACTTACCTTTGGGTTT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR TCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCTGCATTTTACCTGAGTaGAATGGTTTCAAACTGCAT +
Preference number: 2 (lower is better)
Translates to: IHMRTSGAFRYVASSHIICILPE*NGFKLH
Trigger: ATGCAGTTTGAAACCATTTCACTCAGGTAAAATGCA...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR TCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATAGGTTGCATTTTACCTaGGTGAAATGGTTTCAAACT +
Preference number: 2 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDRLHFT*VKWFQT
Trigger: AGTTTGAAACCATTTCACTCAGGTAAAATGCAACCT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCGCTTTTAACTATGTATaGGCCTTATCTGAGACTACA +
Preference number: 2 (lower is better)
Translates to: IHMRTSGAFRYVASSHIIAFNYV*ALSETT
Trigger: TGTAGTCTCAGATAAGGCCCATACATAGTTAAAAGC...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR CAA 90 bp TGCACAGTGACTAAAAAGGGAATAACATTAAATCTTAAGGCAGCATaGGTTGAGTCTTCTCTGGTAAAGGAAGTATTACATATGTCAATG +
Preference number: 2 (lower is better)
Translates to: CTVTKKGITLNLKAA*VESSLVKEVLHMSM
Trigger: CATTGACATATGTAATACTTCCTTTACCAGAGAAGACTCAACCAATGCTGCCTTAAGATTTAATGTTATTCCCTTTTTAGTCACTGTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CCA 72 bp GCCCCTGCCTCCAAGGAGCTCCAGCTGCTCCAACCCTaGCTGGCCCGAGCAGGTGACAGGGCAGTGGCCGGG +
Preference number: 3 (lower is better)
Translates to: APASKELQLLQP*LARAGDRAVAG
Trigger: CCCGGCCACTGCCCTGTCACCTGCTCGGGCCAGCCAGGGTTGGAGCAGCTGGAGCTCCTTGGAGGCAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR GCA 72 bp AGCCGCCAGACCGGGAGGTCACACCTGGTCAGCCCCTaGCTCCAAGGAGCTCCAGCTGCTCCAACCCTGGCT +
Preference number: 3 (lower is better)
Translates to: SRQTGRSHLVSP*LQGAPAAPTLA
Trigger: AGCCAGGGTTGGAGCAGCTGGAGCTCCTTGGAGGCAGGGGCTGACCAGGTGTGACCTCCCGGTCTGGCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CCA 72 bp CAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTaGGAGCAGCCCAAGTCCTTGTCAGATGACCAAGTG +
Preference number: 3 (lower is better)
Translates to: QPRWGSYRCWEP*EQPKSLSDDQV
Trigger: CACTTGGTCATCTGACAAGGACTTGGGCTGCTCCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGGGCACACGCTGGCACTaGATGACTGTGTTTTCTTCC +
Preference number: 3 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRGTRWH*MTVFSS
Trigger: GGAAGAAAACACAGTCATCAAGTGCCAGCGTGTGCC...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR GCA 72 bp GTGTCGCTTGAGGATACTCCCCGACACAAGGCTGCCTaGCCTCCAGAACCACCTTATCCACCAACAGAAAAA +
Preference number: 3 (lower is better)
Translates to: VSLEDTPRHKAA*PPEPPYPPTEK
Trigger: TTTTTCTGTTGGTGGATAAGGTGGTTCTGGAGGGCAGGCAGCCTTGTGTCGGGGAGTATCCTCAAGCGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR GCA 72 bp TTCCCACTCATGTGCCCCCACATGCACAGGGATGTATaGACAGGTGCGACCATCTGGGGGAAGAAGGAAAAA +
Preference number: 3 (lower is better)
Translates to: FPLMCPHMHRDV*TGATIWGKKEK
Trigger: TTTTTCCTTCTTCCCCCAGATGGTCGCACCTGTGCATACATCCCTGTGCATGTGGGGGCACATGAGTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCCTCGGAGGACGGCTTaGGCCAAACACATGGACAGG +
Preference number: 3 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIPRRTA*AKHMDR
Trigger: CCTGTCCATGTGTTTGGCCAAAGCCGTCCTCCGAGG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTACAGTACCACCAGCCTaGACACAGAGCCCAGGGGCA +
Preference number: 3 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEITVPPA*TQSPGA
Trigger: TGCCCCTGGGCTCTGTGTCAAGGCTGGTGGTACTGT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CCA 72 bp CACATGCACAGGGATGTATGCACAGGTGCGACCATCTaGGGGAAGAAGGAAAAAGCTGGAGACGGTACAATA +
Preference number: 3 (lower is better)
Translates to: HMHRDVCTGATI*GKKEKAGDGTI
Trigger: TATTGTACCGTCTCCAGCTTTTTCCTTCTTCCCCCAGATGGTCGCACCTGTGCATACATCCCTGTGCATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAGTTCACTAGAAGCCTaGTTCTCACAGACACCCTTC +
Preference number: 3 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILSSLEA*FSQTPF
Trigger: GAAGGGTGTCTGTGAGAACAAGGCTTCTAGTGAACT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR TCA 72 bp AGCAGATATGAAAGGTGCTGTGGACAACAGCTCACCTaGAGGACACCCTATGGGTCCTCTCATAACACCTAC +
Preference number: 3 (lower is better)
Translates to: SRYERCCGQQLT*RTPYGSSHNTY
Trigger: GTAGGTGTTATGAGAGGACCCATAGGGTGTCCTTCAGGTGAGCTGTTGTCCACAGCACCTTTCATATCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTTCCTTAATGCTGAGTTaGCTTACCTGGTGGGGTGCC +
Preference number: 3 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEISLMLS*LTWWGA
Trigger: GGCACCCCACCAGGTAAGCAAACTCAGCATTAAGGA...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGCTTAATGAGCACTCTTaGAGCTCCTTTTTCACTTGT +
Preference number: 3 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRLNEHS*SSFFTC
Trigger: ACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAG...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR TCA 72 bp GATAGACAGAAAGTAGGGCTCCCTTTACAGCAGATATaGAAGGTGCTGTGGACAACAGCTCACCTGAAGGAC +
Preference number: 3 (lower is better)
Translates to: DRQKVGLPLQQI*KVLWTTAHLKD
Trigger: GTCCTTCAGGTGAGCTGTTGTCCACAGCACCTTTCATATCTGCTGTAAAGGGAGCCCTACTTTCTGTCTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGAGAGCAGCCCAAGTCCTaGTCAGATGACCAAGTGTCG +
Preference number: 3 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKREQPKS*SDDQVS
Trigger: CGACACTTGGTCATCTGACAAGGACTTGGGCTGCTC...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGATTAGGCTGCAGGCTTaGCCCAATAGTTCACATAGG +
Preference number: 3 (lower is better)
Translates to: RFAILAGLPGLTTYCACVIRLQA*PNSSHR
Trigger: CCTATGTGAACTATTGGGCAAAGCCTGCAGCCTAAT...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTATTAGGCTGCAGGCTTaGCCCAATAGTTCACATAGG +
Preference number: 3 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIIRLQA*PNSSHR
Trigger: CCTATGTGAACTATTGGGCAAAGCCTGCAGCCTAAT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR TCA 72 bp TGTAACACGGTTCACCGTGAAGACGATCCATCCCACTaGTGGCACTTTATAGCTAAGCAAAGTGATATCGGC +
Preference number: 3 (lower is better)
Translates to: CNTVHREDDPSH*WHFIAKQSDIG
Trigger: GCCGATATCACTTTGCTTAGCTATAAAGTGCCATCAGTGGGATGGATCGTCTTCACGGTGAACCGTGTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR GCA 72 bp TACATCCTTAATGCTGAGTTTGCTTACCTGGTGGGGTaGCTAAATCATCGTGTCCCAAGTATTGGTGCCATC +
Preference number: 3 (lower is better)
Translates to: YILNAEFAYLVG*LNHRVPSIGAI
Trigger: GATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGCAAACTCAGCATTAAGGATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CCA 72 bp CCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTaGTGCCATCCTAAAATGATGACATGTAATTGTGGC +
Preference number: 3 (lower is better)
Translates to: PGGVPKSSCPKY*CHPKMMTCNCG
Trigger: GCCACAATTACATGTCATCATTTTAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CCA 72 bp ACAGCTGAGCAAGAGGACCCTGGGACAGGTTATACTTaGAATCTACCCAGAAGAGATTGTCTCCATCTCTTT +
Preference number: 3 (lower is better)
Translates to: TAEQEDPGTGYT*NLPRRDCLHLF
Trigger: AAAGAGATGGAGACAATCTCTTCTGGGTAGATTCCAAGTATAACCTGTCCCAGGGTCCTCTTGCTCAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTTTTTCTTCCTCACTCTaGTTTCCCAAGGTGGCATGT +
Preference number: 3 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIFSSSL*FPKVAC
Trigger: ACATGCCACCTTGGGAAACAAGAGTGAGGAAGAAAA...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR TCA 72 bp GGCACAGATAAAACCATTCTATTGCCAGGAAGAAACTaGGCATCAGAGCTGACGATACTCTACACTCCTGTG +
Preference number: 3 (lower is better)
Translates to: GTDKTILLPGRN*ASELTILYTPV
Trigger: CACAGGAGTGTAGAGTATCGTCAGCTCTGATGCTCAGTTTCTTCCTGGCAATAGAATGGTTTTATCTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGGGAGGTTTTCACATTTaGATCACAGATTGGCTTTTC +
Preference number: 3 (lower is better)
Translates to: RFAILAGLPGLTTYCACVGGFHI*ITDWLF
Trigger: GAAAAGCCAATCTGTGATCAAAATGTGAAAACCTCC...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTCCTTAATGCTGAGTTaGCTTACCTGGTGGGGTGCC +
Preference number: 3 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCSLMLS*LTWWGA
Trigger: GGCACCCCACCAGGTAAGCAAACTCAGCATTAAGGA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCCTTCTGTCACAGCTTaGGTTAGGTACTTCCATAAA +
Preference number: 3 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIPSVTA*VRYFHK
Trigger: TTTATGGAAGTACCTAACCAAAGCTGTGACAGAAGG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCGAGCAGCCCAAGTCCTaGTCAGATGACCAAGTGTCG +
Preference number: 3 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCEQPKS*SDDQVS
Trigger: CGACACTTGGTCATCTGACAAGGACTTGGGCTGCTC...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATGGCACACGCTGGCACTaGATGACTGTGTTTTCTTCC +
Preference number: 3 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDGTRWH*MTVFSS
Trigger: GGAAGAAAACACAGTCATCAAGTGCCAGCGTGTGCC...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR TCA 72 bp AAGCAAAGTGATATCGGCATTTGCCCAAGTGAGGAGTaGAGTAGCTCTGAGTCCAGTTATCTTTCAAGTACA +
Preference number: 3 (lower is better)
Translates to: KQSDIGICPSEE*SSSESSYLSST
Trigger: TGTACTTGAAAGATAACTGGACTCAGAGCTACTTCACTCCTCACTTGGGCAAATGCCGATATCACTTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR TCA 72 bp TTGTTTCCTGGCATTTGGTGCTATAGAGCAGAAGTCTaGAGCCAGATGCTCTTTGGTTTTCTTACAGGCAAT +
Preference number: 3 (lower is better)
Translates to: LFPGIWCYRAEV*SQMLFGFLTGN
Trigger: ATTGCCTGTAAGAAAACCAAAGAGCATCTGGCTTCAGACTTCTGCTCTATAGCACCAAATGCCAGGAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR GCA 72 bp AAGCGCAATCTGTCTCCTGGAAATAGGGAACGTGTCTaGCTCTCTCTAGTTTCTAATTGTGAGTGTAATTCA +
Preference number: 3 (lower is better)
Translates to: KRNLSPGNRERV*LSLVSNCECNS
Trigger: TGAATTACACTCACAATTAGAAACTAGAGAGAGGCAGACACGTTCCCTATTTCCAGGAGACAGATTGCGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CCA 72 bp TGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTaGGAAATTCTGTTATGTCAGAATACACATATCAGA +
Preference number: 3 (lower is better)
Translates to: CLKRGQPSSKKS*EILLCQNTHIR
Trigger: TCTGATATGTGTATTCTGACATAACAGAATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CCA 72 bp ACTGTGTTTAACTTTCTTAAAGTTAATGGACTTCCATaGCCTCCAGGAGGCAGTTTTGTCTCATGGACTGAG +
Preference number: 3 (lower is better)
Translates to: TVFNFLKVNGLP*PPGGSFVSWTE
Trigger: CTCAGTCCATGAGACAAAACTGCCTCCTGGAGGCCATGGAAGTCCATTAACTTTAAGAAAGTTAAACACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCATGACCAAGTGTCGCTaGAGGATACTCCCCGACACA +
Preference number: 3 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCMTKCR*RILPDT
Trigger: TGTGTCGGGGAGTATCCTCAAGCGACACTTGGTCAT...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTATAAAATTCTCTCCATaGACAGCCGAGATGGGGTTC +
Preference number: 3 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCIKFSP*TAEMGF
Trigger: GAACCCCATCTCGGCTGTCAATGGAGAGAATTTTAT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTTTTCTTCCTCACTCTaGTTTCCCAAGGTGGCATGT +
Preference number: 3 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCFSSSL*FPKVAC
Trigger: ACATGCCACCTTGGGAAACAAGAGTGAGGAAGAAAA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATATAAAATTCTCTCCATaGACAGCCGAGATGGGGTTC +
Preference number: 3 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDIKFSP*TAEMGF
Trigger: GAACCCCATCTCGGCTGTCAATGGAGAGAATTTTAT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATGGGGATCTGTGTTTTTaGCAGCTTGTTTGGTTAGCT +
Preference number: 3 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDGDLCF*QLVWLA
Trigger: AGCTAACCAAACAAGCTGCAAAAAACACAGATCCCC...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGACTGTTCTTCCTTCACTaGTTTTTGCTTATATCTGAG +
Preference number: 3 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRLFFLH*FLLISE
Trigger: CTCAGATATAAGCAAAAACAAGTGAAGGAAGAACAG...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR CCA 72 bp ACTAACTCTCTAGTCCTGAATCTATTACTTATTGTTTaGCTGATCTTGGATGGGCCCTTTAATATCTCTGGC +
Preference number: 3 (lower is better)
Translates to: TNSLVLNLLLIV*LILDGPFNISG
Trigger: GCCAGAGATATTAAAGGGCCCATCCAAGATCAGCCAAACAATAAGTAATAGATTCAGGACTAGAGAGTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCGGGGATCTGTGTTTTTaGCAGCTTGTTTGGTTAGCT +
Preference number: 3 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCGDLCF*QLVWLA
Trigger: AGCTAACCAAACAAGCTGCAAAAAACACAGATCCCC...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATAATCTTAAGGCAGCATaGGTTGAGTCTTCTCTGGTA +
Preference number: 3 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDNLKAA*VESSLV
Trigger: TACCAGAGAAGACTCAACCAATGCTGCCTTAAGATT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCAGGCTTAACCACATATaGTGCGTGTGTGTGTGTAAA +
Preference number: 3 (lower is better)
Translates to: ALDLESENLHSPTYKLKFRLNHI*CVCVCK
Trigger: TTTACACACACACACGCACAATATGTGGTTAAGCCT...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR TCA 72 bp TTTATGGAACATCAACTAGGTGACAGGCAACACATTTaGGGCAGAGATGATTATTTAGCTGATGAAAAGCCA +
Preference number: 3 (lower is better)
Translates to: FMEHQLGDRQHI*GRDDYLADEKP
Trigger: TGGCTTTTCATCAGCTAAATAATCATCTCTGCCTCAAATGTGTTGCCTGTCACCTAGTTGATGTTCCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCGGAGGTTTTCACATTTaGATCACAGATTGGCTTTTC +
Preference number: 3 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCGGFHI*ITDWLF
Trigger: GAAAAGCCAATCTGTGATCAAAATGTGAAAACCTCC...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR TCA 72 bp CTCCAACTTACAAACTTAAATTCTCCAACTTATCGGTaGGATTTTCAGAATTTTAACTCCTCTGAGCCTAGA +
Preference number: 3 (lower is better)
Translates to: LQLTNLNSPTYR*DFQNFNSSEPR
Trigger: TCTAGGCTCAGAGGAGTTAAAATTCTGAAAATCTCACCGATAAGTTGGAGAATTTAAGTTTGTAAGTTGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTGGGGTTCCTACCGCTaGTGGGAGCCGTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGWGSYR*WEPWEQ
Trigger: CTGCTCCCACGGCTCCCAGCAGCGGTAGGAACCCCA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGCACTGGCAGCAGCTGTaGGAGCCAAGCCTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGHWQQL*EPSLRE
Trigger: CTCCCGGAGGCTTGGCTCCCACAGCTGCTGCCAGTG...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGCAGCTGCTCCAACCCTaGCTGGCCCGAGCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGQLLQP*LARAGD
Trigger: GTCACCTGCTCGGGCCAGCCAGGGTTGGAGCAGCTG...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGGACTTGGCCTCCATTTaGGTGGGCGGCCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGDLASI*VGGRWM
Trigger: CATCCACCGGCCGCCCACCCAAATGGAGGCCAAGTC...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGCGCAGCCCCATCCTCTaGTCCTCATACCACACGCTG +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGRSPIL*SSYHTL
Trigger: CAGCGTGTGGTATGAGGAGCAGAGGATGGGGCTGCG...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTATGGCTGGAGCGACTaGGGGCTGCTGCTGACTGGA +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGYGWSD*GLLLTG
Trigger: TCCAGTCAGCAGCAGCCCCCAGTCGCTCCAGCCATA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTGGCCTCCATTTGGGTaGGCGGCCGGTGGATGTACA +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGWPPFG*AAGGCT
Trigger: TGTACATCCACCGGCCGCCCACCCAAATGGAGGCCA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTACAGGTGACAGGGCAGTaGCCGGGCCCCAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILQVTGQ*PGPSGG
Trigger: GCCCCCACTGGGGCCCGGCCACTGCCCTGTCACCTG...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGGGACAACAGCTCACCTaGAGGACACCCTATGGGTCC +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGGQQLT*RTPYGS
Trigger: GGACCCATAGGGTGTCCTTCAGGTGAGCTGTTGTCC...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGCGCTGCTGGGAGCCGTaGGAGCAGCCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRRCWEP*EQPKSL
Trigger: CAAGGACTTGGGCTGCTCCCACGGCTCCCAGCAGCG...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR CAA 72 bp TACCGCTGCTGGGAGCCGTGGGAGCAGCCCAAGTCCTaGTCAGATGACCAAGTGTCGCTTGAGGATACTCCC +
Preference number: 4 (lower is better)
Translates to: YRCWEPWEQPKS*SDDQVSLEDTP
Trigger: GGGAGTATCCTCAAGCGACACTTGGTCATCTGACAAGGACTTGGGCTGCTCCCACGGCTCCCAGCAGCGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGCATCCTGGTCTGGTATaGACTGTGCTGTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGHPGLV*TVLWPQ
Trigger: CTGAGGCCACAGCACAGTGCATACCAGACCAGGATG...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTTGCGAGCAATGCTTTaGGGCCTTTGGGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGLRAML*GLWVWG
Trigger: ACCCCAAACCCAAAGGCCTCAAAGCATTGCTCGCAA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTGGCTCTGTGTTAACTaGGGGAGAAAGGGCTACCTC +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGWLCVN*GRKGYL
Trigger: GAGGTAGCCCTTTCTCCCTCAGTTAACACAGAGCCA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTACCAAGGAGCTCCAGCTaGTCCAACCCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILPRSSS*SNPGWP
Trigger: GGGCCAGCCAGGGTTGGAGCAGCTGGAGCTCCTTGG...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGGTCTGGGAGCTTGAATaGAGGGAAGATGGGACTACC +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGVWELE*REDGTT
Trigger: GGTAGTCCCATCTTCCCTCCATTCAAGCTCCCAGAC...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTGTGGCCGGGCCCCAGTaGGGGCTCACTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIVAGPQ*GLTGSS
Trigger: GCTGCTGCCAGTGAGCCCCCACTGGGGCCCGGCCAC...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCAGGTGACAGGGCAGTaGCCGGGCCCCAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIQVTGQ*PGPSGG
Trigger: GCCCCCACTGGGGCCCGGCCACTGCCCTGTCACCTG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CAA 72 bp AGCAGCCCAAGTCCTTGTCAGATGACCAAGTGTCGCTaGAGGATACTCCCCGACACAAGGCTGCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SSPSPCQMTKCR*RILPDTRLPAL
Trigger: GAGGGCAGGCAGCCTTGTGTCGGGGAGTATCCTCAAGCGACACTTGGTCATCTGACAAGGACTTGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGCTGAGGCTTGGGTTTTaGCATCTGTGTCAAGGACAG +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGLRLGF*HLCQGQ
Trigger: CTGTCCTTGACACAGATGGCAAAACCCAAGCCTCAG...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGTTCCAACAGGGAGTCTaGTTAGATTCCGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRFQQGV*LDSGGR
Trigger: CCGGCCCCCGGAATCTAAGCAGACTCCCTGTTGGAA...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp GCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTGACAGGGCAGGTCTGTaGGGCGTGCTGGGTGGCATA +
Preference number: 4 (lower is better)
Translates to: AQEGEREAVYNHSFSGHSDRAGL*GVLGGI
Trigger: TATGCCACCCAGCACGCCCCACAGACCTGCCCTGTC...ACTGTGTCCGGAGAAACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR TCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGTCCGACTCTCCCGCTTaGCGCTGTCCGTCCGGGCAA +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVSDSPA*RCPSGQ
Trigger: TTGCCCGGACGGACAGCGTCAAGCGGGAGAGTCGGA...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGCCAAGGAGCTCCAGCTaGTCCAACCCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVPRSSS*SNPGWP
Trigger: GGGCCAGCCAGGGTTGGAGCAGCTGGAGCTCCTTGG...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGCGACACAAGGCTGCCTaGCCTCCAGAACCACCTTAT +
Preference number: 4 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRRHKAA*PPEPPY
Trigger: ATAAGGTGGTTCTGGAGGGCAGGCAGCCTTGTGTCG...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAATGGTCTCGGCTCACTaGAACCTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILMVSAH*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGACCAT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTTTGCGGAGCGCGGTCTaGGTGCTCCGGATGGTTTTC +
Preference number: 4 (lower is better)
Translates to: AQEGEREAVYNHSFSGHSLRSAV*VLRMVF
Trigger: GAAAACCATCCGGAGCACGCAGACCGCGCTCCGCAA...ACTGTGTCCGGAGAAACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGCTGCAAATAGTCCCATaGCTATGGGCCCAGCTGACC +
Preference number: 4 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRLQIVP*LWAQLT
Trigger: GGTCAGCTGGGCCCATAGCCATGGGACTATTTGCAG...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGCGCATGTTCAGGTACTaGCTGTTGTACTTGACCACA +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGRMFRY*LLYLTT
Trigger: TGTGGTCAAGTACAACAGCCAGTACCTGAACATGCG...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTACTGTGGCCTCCTTCCTaGCAGTCAGGTAGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILLWPPS*QSGRRG
Trigger: CCCCCTTCTACCTGACTGCCAGGAAGGAGGCCACAG...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGCGCTGCTGGGAGCCGTaGGAGCAGCCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVRCWEP*EQPKSL
Trigger: CAAGGACTTGGGCTGCTCCCACGGCTCCCAGCAGCG...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTGGTTCCTACCGCTGCTaGGAGCCGTGGGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIGSYRC*EPWEQP
Trigger: GGGCTGCTCCCACGGCTCCCAGCAGCGGTAGGAACC...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTACAGGCTGGAGTGCAGTaGCATGGTCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILQAGVQ*HGLGSL
Trigger: CAGTGAGCCGAGACCATGCCACTGCACTCCAGCCTG...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGCTTTGGCCAAACACATaGACAGGTGCTTCGCCATTT +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGLWPNT*TGASPF
Trigger: AAATGGCGAAGCACCTGTCCATGTGTTTGGCCAAAG...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGCTCGGAGGACGGCTTTaGCCAAACACATGGACAGGT +
Preference number: 4 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRLGGRL*PNTWTG
Trigger: ACCTGTCCATGTGTTTGGCCAAAGCCGTCCTCCGAG...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGAGGTTTAGAGCTGACTaGAAGCCAGAACAACTGCCT +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGRFRAD*KPEQLP
Trigger: AGGCAGTTGTTCTGGCTTCCAGTCAGCTCTAAACCT...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGGTTAATGGACTTCCATaGCCTCCAGGAGGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGVNGLP*PPGGSF
Trigger: AAAACTGCCTCCTGGAGGCCATGGAAGTCCATTAAC...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTATATTTTTCCACTTTaGGAGGCCGAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGYIFPL*EAEAGG
Trigger: TCCACCTGCCTCGGCCTCCCAAAGTGGAAAAATATA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR CAA 72 bp GCTACTCTGGCCCCCTTAAGACCTCGGAGGACGGCTTaGGCCAAACACATGGACAGGTGCTTCGCCATTTTA +
Preference number: 4 (lower is better)
Translates to: ATLAPLRPRRTA*AKHMDRCFAIL
Trigger: TAAAATGGCGAAGCACCTGTCCATGTGTTTGGCCAAAGCCGTCCTCCGAGGTCTTAAGGGGGCCAGAGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGACTGGCTGTTGTACTTaGCCACAGTGGACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRTGCCT*PQWTGE
Trigger: CTCTCCTGTCCACTGTGGTCAAGTACAACAGCCAGT...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAGCCTCCGGGAGACCTaGGTGAACGAGACAAAGGTG +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILSLRET*VNETKV
Trigger: CACCTTTGTCTCGTTCACTCAGGTCTCCCGGAGGCT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGGCTCTCACATGGTGCTaGGAAATAAAACATAGGCAC +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGALTWC*EIKHRH
Trigger: GTGCCTATGTTTTATTTCTCAGCACCATGTGAGAGC...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTCCAGTGGTATATGCTaGCCGAATAATGGGATGACA +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGSSGIC*PNNGMT
Trigger: TGTCATCCCATTATTCGGTCAGCATATACCACTGGA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGCCTTTACAGCAGATATaGAAGGTGCTGTGGACAACA +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGPLQQI*KVLWTT
Trigger: TGTTGTCCACAGCACCTTTCATATCTGCTGTAAAGG...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGAATCCCTTCCAACGCTaGCACTCTAGGACAGAAAAT +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGNPFQR*HSRTEN
Trigger: ATTTTCTGTCCTAGAGTGTCAGCGTTGGAAGGGATT...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGAACGCGCGCCCGACATaGCTGCCTTACTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVNARPT*LPYSAP
Trigger: GGGTGCTGAGTAAGGCAGGCATGTCGGGCGCGCGTT...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTTGGGGTTCCTACCGCTaGTGGGAGCCGTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIWGSYR*WEPWEQ
Trigger: CTGCTCCCACGGCTCCCAGCAGCGGTAGGAACCCCA...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATTCCAACAGGGAGTCTaGTTAGATTCCGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILFQQGV*LDSGGR
Trigger: CCGGCCCCCGGAATCTAAGCAGACTCCCTGTTGGAA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGGTCTGGGAGCTTGAATaGAGGGAAGATGGGACTACC +
Preference number: 4 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRVWELE*REDGTT
Trigger: GGTAGTCCCATCTTCCCTCCATTCAAGCTCCCAGAC...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGTGTCAAGGACAGGGCTaGTCCATCTACTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRCQGQG*SIYSSC
Trigger: ACAGGAGGAGTAGATGGACCAGCCCTGTCCTTGACA...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCACTGGCAGCAGCTGTaGGAGCCAAGCCTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIHWQQL*EPSLRE
Trigger: CTCCCGGAGGCTTGGCTCCCACAGCTGCTGCCAGTG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CAA 72 bp ATGGGTCCTCTCATAACACCTACAGTACCACCAGCCTaGACACAGAGCCCAGGGGCAACTTGTGCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: MGPLITPTVPPA*TQSPGATCASV
Trigger: GACTGAAGCACAAGTTGCCCCTGGGCTCTGTGTCAAGGCTGGTGGTACTGTAGGTGTTATGAGAGGACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATGTCTGTGTGGTCTTTaGGCCCGTTGGTCATGCACC +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILCLCGL*ARWSCT
Trigger: GGTGCATGACCAACGGGCTCAAAGACCACACAGACA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGGTTTTTGCTTATATCTaGGGTATCAGAGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGVFAYI*GIRAWL
Trigger: CAGCCAAGCTCTGATACCTCAGATATAAGCAAAAAC...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGGAGGTAACTCTTCTTTaGGGTCTTCACTGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGEVTLL*GLHCLH
Trigger: ATGCAAACAGTGAAGACCTCAAAGAAGAGTTACCTC...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTGTATGGGCCTTATCTaGGACTACATTGGAGATCAT +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGCMGLI*DYIGDH
Trigger: ATGATCTCCAATGTAGTCTCAGATAAGGCCCATACA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCGCGCCCGACATGCCTaGCTTACTCAGCACCCACAG +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIRARHA*LTQHPQ
Trigger: CTGTGGGTGCTGAGTAAGGCAGGCATGTCGGGCGCG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAGAAGTAGACGATGTTaGGAGAACGCGCGCCCGACA +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILRSRRC*ENARPT
Trigger: TGTCGGGCGCGCGTTCTCGCAACATCGTCTACTTCT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATACATCAGATCCGCATaGTCCTGCAGCGTCCGCATG +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILYIRSA*SCSVRM
Trigger: CATGCGGACGCTGCAGGAGCATGCGGATCTGATGTA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GAATTAACACTGAGGGCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTGGAGCGCGGTCTGCGTaGTCCGGATGGTTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: ELTLRAQEGEREAVYNHSGARSA*SGWFSR
Trigger: ACGAGAAAACCATCCGGAGCACGCAGACCGCGCTCC...ACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGCCCTCAGTGTTAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp AGTGAATTAACACTGAGGGCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACGGGGCTGCTGCTGACTaGAGCTCACTTCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SELTLRAQEGEREAVYNHGAAAD*SSLLAL
Trigger: CAGAGCCAGAAGTGAGCTCCAGTCAGCAGCAGCCCC...GTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGCCCTCAGTGTTAATTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGCCTCGGCGAATAGCATaGAGCGAGGTGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVPRRIA*SEVARK
Trigger: CTTCCTGGCCACCTCGCTCCATGCTATTCGCCGAGG...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGTCCCGTGACACACTCTaGTGGAGCCGCTCCGACTCT +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVSRDTL*WSRSDS
Trigger: AGAGTCGGAGCGGCTCCACCAGAGTGTGTCACGGGA...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTCACAGACACCCTTCTaGTGCGTGAATCTTTTATCA +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGSQTPF*CVNLLS
Trigger: TGATAAAAGATTCACGCACCAGAAGGGTGTCTGTGA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTCGTGTCCCAAGTATTaGTGCCATCCTAAAATGATG +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGSCPKY*CHPKMM
Trigger: CATCATTTTAGGATGGCACCAATACTTGGGACACGA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGGCAACAATCAGATTCTaGTCAACCACTGAACATGGA +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGATIRF*STTEHG
Trigger: TCCATGTTCAGTGGTTGACCAGAATCTGATTGTTGC...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTTGTTTCCTGGCATTTaGTGCTATAGAGCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGLFPGI*CYRAEV
Trigger: GACTTCTGCTCTATAGCACCAAATGCCAGGAAACAA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTTGGCTTTTCTCACTTaGAAGCAGTGGACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGLAFLT*KQWTLS
Trigger: TGAAAGAGTCCACTGCTTCCAAGTGAGAAAAGCCAA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATCTGCGTGCTCCGGATaGTTTTCTCGTTCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILSACSG*FSRSAP
Trigger: GGGAGCAGAACGAGAAAACCATCCGGAGCACGCAGA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536272.5
CDS-3UTR CCA 90 bp ATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGCCACCTGTTGCCATTGTTGGAGTaGCCGGCCACTGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: ITVSPDTVTKLESCSSHLLPLLE*PATDWA
Trigger: TGCCCAGTCAGTGGCCGGCCACTCCAACAATGGCAA...CAGGTGGCTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR TCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATGGCTCTGTGTTAACTaGGGGAGAAAGGGCTACCTC +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILWLCVN*GRKGYL
Trigger: GAGGTAGCCCTTTCTCCCTCAGTTAACACAGAGCCA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGGGACAACAGCTCACCTaGAGGACACCCTATGGGTCC +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVGQQLT*RTPYGS
Trigger: GGACCCATAGGGTGTCCTTCAGGTGAGCTGTTGTCC...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGCCACCTGTGGTCAAGCGGTGTCTaGGGAAGAGTCATAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ITVSPDTVTKLESCSSHLWSSGV*GRVIGG
Trigger: GCCTCCTATGACTCTTCCTCAGACACCGCTTGACCA...CAGGTGGCTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAACTACAGCCCCACATTaGTGTCAGGTTCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILTTAPH*CQVPMG
Trigger: TCCCATGGGAACCTGACAGCAATGTGGGGCTGTAGT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GGGCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTTTCTCCGGACACACATTCGTCAACCATCTaGGTCTGGGAGCTTGAATGG +
Preference number: 4 (lower is better)
Translates to: GHRKGNEKRCIITVSPDTHSSTI*VWELEW
Trigger: CCATTCAAGCTCCCAGACGCAGATGGTTGACGAATG...TGTGTCCGGAGAAACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATCTTCAGAGGCAACTTaGTCATCCTGTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILSSEAT*SSCPGS
Trigger: GCTGCCTGGACAGGATGAGCAAGTTGCCTCTGAAGA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGAGTATTTGGGCTTACTaGACTGGTACACAGATCATT +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGSIWAY*TGTQII
Trigger: AATGATCTGTGTACCAGTGCAGTAAGCCCAAATACT...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGCCTCATACCACACGCTaGCCATGTCTGTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVPHTTR*PCLWPP
Trigger: AGGAGGCCACAGACATGGGCAGCGTGTGGTATGAGG...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGCGCGCCAGGCCGCTTTaGCATTTTAGCAGGCTTACC +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVRARPL*HFSRLT
Trigger: GGTAAGCCTGCTAAAATGGCAAAGCGGCCTGGCGCG...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTGGAGTCAGAAAACCTaGATTCTCCAACTTACAAAC +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGWSQKT*ILQLTN
Trigger: GTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAATGCACAGGGATGTATaGACAGGTGCGACCATCTGG +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILMHRDV*TGATIW
Trigger: CCAGATGGTCGCACCTGTGCATACATCCCTGTGCAT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp GTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGCAGGTCTGTGGGGCGTaGTGGGTGGCATACACACGG +
Preference number: 4 (lower is better)
Translates to: VYNHSFSGHSNQTGVLLKQVCGA*WVAYTR
Trigger: CCGTGTGTATGCCACCCAGCACGCCCCACAGACCTG...CTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp ATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGCCACCTGTGGCCAGCTTGTTCTTaGCAAGGGCCTGGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: ITVSPDTVTKLESCSSHLWPACS*QGPGSC
Trigger: ACAACTGCCAGGCCCTTGGCAAGAACAAGCTGGCCA...CAGGTGGCTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp GAATTAACACTGAGGGCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTTCAGCACGAGCTGGTTaGTCTGGGCCTCAGACAAGG +
Preference number: 4 (lower is better)
Translates to: ELTLRAQEGEREAVYNHSSARAG*SGPQTR
Trigger: CCTTGTCTGAGGCCCAGAGCAACCAGCTCGTGCTGA...ACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGCCCTCAGTGTTAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GGGCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTTTCTCCGGACACACGTGAGTCTGAGGCTTaGGTTTTGCCATCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: GHRKGNEKRCIITVSPDTRESEA*VLPSVS
Trigger: TGACACAGATGGCAAAACCCAAGCCTCAGACTCACG...TGTGTCCGGAGAAACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATCACAGGCATTTGCATaGCCACCTGTTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILSQAFA*PPVGWC
Trigger: GCACCAACCAACAGGTGGCCATGCAAATGCCTGTGA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp AAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTATGGCTGGAGCGACTaGGGGCTGCTGCTGACTGGA +
Preference number: 4 (lower is better)
Translates to: KRCIITVSPDTVTKLESCYGWSD*GLLLTG
Trigger: TCCAGTCAGCAGCAGCCCCCAGTCGCTCCAGCCATA...GCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCGTGGCCGGGCCCCAGTaGGGGCTCACTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IHMRTSGAFRYVASSHIIVAGPQ*GLTGSS
Trigger: GCTGCTGCCAGTGAGCCCCCACTGGGGCCCGGCCAC...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp GGGCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTTTCTCCGGACACAGCTGCTCTTTCATCCTaGTCTGGTATGCACTGTGCT +
Preference number: 4 (lower is better)
Translates to: GHRKGNEKRCIITVSPDTAALSS*SGMHCA
Trigger: AGCACAGTGCATACCAGACCAGGATGAAAGAGCAGC...TGTGTCCGGAGAAACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR TCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGGGACAGATTCTCAGATaGGGTATGAAGACAATCCTC +
Preference number: 4 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRGQILR*GMKTIL
Trigger: GAGGATTGTCTTCATACCTCATCTGAGAATCTGTCC...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp ATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGCCACCTGTGGCTCTGTGTTAACTaGGGGAGAAAGGGCTACCTC +
Preference number: 4 (lower is better)
Translates to: ITVSPDTVTKLESCSSHLWLCVN*GRKGYL
Trigger: GAGGTAGCCCTTTCTCCCTCAGTTAACACAGAGCCA...CAGGTGGCTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR TCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGGACCGAATAATGGGATaGCACGAAGAACAGACAGAA +
Preference number: 4 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRDRIMG*HEEQTE
Trigger: TTCTGTCTGTTCTTCGTGTCATCCCATTATTCGGTC...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGCCGAAAAGATCCCAGTaGTTCCTAACGGCAATTTCT +
Preference number: 4 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRPKRSQ*FLTAIS
Trigger: AGAAATTGCCGTTAGGAATCACTGGGATCTTTTCGG...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATCCATCAGATGCCACTaGAGATTCGCCCTCCTGATT +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILSIRCH*RFALLI
Trigger: AATCAGGAGGGCGAATCTTCAGTGGCATCTGATGGA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTTACTTTTTAAGCAGTaGGTCCAATGTCAAAACAGG +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGLLFKQ*VQCQNR
Trigger: CCTGTTTTGACATTGGACTCACTGCTTAAAAAGTAA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTACATTCGTCAACCATCTaGGTCTGGGAGCTTGAATGG +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILHSSTI*VWELEW
Trigger: CCATTCAAGCTCCCAGACGCAGATGGTTGACGAATG...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GAATTAACACTGAGGGCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTGATCACAGAGGGGGATaGAGACATACCGTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: ELTLRAQEGEREAVYNHSDHRGG*RHTVWV
Trigger: GACCCACACGGTATGTCTGCATCCCCCTCTGTGATC...ACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGCCCTCAGTGTTAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCCACCTGTTGGTTGGTaGCATGTGTACCAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIPPVGW*HVYQGV
Trigger: GACCCCCTGGTACACATGGCACCAACCAACAGGTGG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GAACGAGAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGACCACCTGTTGGTTGGTaGCATGTGTACCAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: EREAVYNHSFSGHSNQTGPPVGW*HVYQGV
Trigger: GACCCCCTGGTACACATGGCACCAACCAACAGGTGG...TCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTTCTCGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp ATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGCCACCTGTCTTCAGAGGCAACTTaGTCATCCTGTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ITVSPDTVTKLESCSSHLSSEAT*SSCPGS
Trigger: GCTGCCTGGACAGGATGAGCAAGTTGCCTCTGAAGA...CAGGTGGCTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGACGCGCCCGACATGCCTaGCTTACTCAGCACCCACAG +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRRARHA*LTQHPQ
Trigger: CTGTGGGTGCTGAGTAAGGCAGGCATGTCGGGCGCG...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTAGATCCGCATGCTCCTaGAGCGTCCGCATGTTCAGG +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIRSACS*SVRMFR
Trigger: CCTGAACATGCGGACGCTGCAGGAGCATGCGGATCT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCCTCATACCACACGCTaGCCATGTCTGTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIPHTTR*PCLWPP
Trigger: AGGAGGCCACAGACATGGGCAGCGTGTGGTATGAGG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCGCGCCAGGCCGCTTTaGCATTTTAGCAGGCTTACC +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIRARPL*HFSRLT
Trigger: GGTAAGCCTGCTAAAATGGCAAAGCGGCCTGGCGCG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGAACGCCAACGAGGACTaGTACTCTGGCCCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVNANED*YSGPLK
Trigger: CTTAAGGGGGCCAGAGTAGCAGTCCTCGTTGGCGTT...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGTGGAATAAGGGAAATTaGGGAGCGCGGTCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVWNKGN*GARSAC
Trigger: GCACGCAGACCGCGCTCCGCAATTTCCCTTATTCCA...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536272.5
CDS-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAATAGTCCCATGGCTATaGGCCCAGCTGACCAATTTG +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILIVPWL*AQLTNL
Trigger: CAAATTGGTCAGCTGGGCCCATAGCCATGGGACTAT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGATGGCAGATGTGACATaGGGAATCAGTTTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRMADVT*GISLAD
Trigger: GTCTGCTAAACTGATTCCCCATGTCACATCTGCCAT...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGCTAGAAATTCCCTCATaGTACAAACTGTCTAGTTCA +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGLEIPS*YKLSSS
Trigger: TGAACTAGACAGTTTGTACCATGAGGGAATTTCTAG...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAATGGGTGGCACACGCTaGCACTTGATGACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILMGGTR*HLMTVF
Trigger: AAACACAGTCATCAAGTGCCAGCGTGTGCCACCCAT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAAGTACCTAGTACAATaGGTGGCACACGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILKYLVQ*VAHAGT
Trigger: AGTGCCAGCGTGTGCCACCCATTGTACTAGGTACTT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAGACTCTCAAGTAGCTaGGATTACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILRLSSS*DYRHLP
Trigger: TGGCAGGTGCCTGTAATCCCAGCTACTTGAGAGTCT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGCTCGGAGGACGGCTTTaGCCAAACACATGGACAGGT +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVLGGRL*PNTWTG
Trigger: ACCTGTCCATGTGTTTGGCCAAAGCCGTCCTCCGAG...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGCTTCTGTCACAGCTTTaGTTAGGTACTTCCATAAAA +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGLLSQL*LGTSIK
Trigger: TTTTATGGAAGTACCTAACCAAAGCTGTGACAGAAG...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTCCTCAAAGAAGTCTTaGGAAATTCTGTTATGTCAG +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGSSKKS*EILLCQ
Trigger: CTGACATAACAGAATTTCCCAAGACTTCTTTGAGGA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTACCATTCTCACCTCAATaGGGGGAGGGAGAGTTATCT +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILPFSPQ*GEGELS
Trigger: AGATAACTCTCCCTCCCCCCATTGAGGTGAGAATGG...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGGATTTGGCCTTCTTCTaGGTTTTTCTGGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRDLAFF*VFLGRY
Trigger: GTACCTTCCCAGAAAAACCCAGAAGAAGGCCAAATC...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp CAGAATTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGGTCTGTGGGGCGTGCTaGGTGGCATACACACGGGAG +
Preference number: 4 (lower is better)
Translates to: QNSLSTLCCLRTTYGFVKVCGAC*VAYTRE
Trigger: CTCCCGTGTGTATGCCACCCAGCACGCCCCACAGAC...CTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp ACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTAATTCATCCTCGTAGCGCATaGCGGGAGGCCGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: TLCCLRTTYGFVKSVTVIHPRSA*REAAAG
Trigger: CCCAGCGGCGGCCTCCCGCCATGCGCTACGAGGATG...AATTACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCAGATCAGCACGAGCTaGTTGCTCTGGGCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: EAVYNHSFSGHSNQTGVLQISTS*LLWASD
Trigger: GTCTGAGGCCCAGAGCAACCAGCTCGTGCTGATCTG...CAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR TCA 90 bp GAATTAACACTGAGGGCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTGGCTATGGGCCCAGCTaGCCAATTTGGACAGATTCT +
Preference number: 4 (lower is better)
Translates to: ELTLRAQEGEREAVYNHSGYGPS*PIWTDS
Trigger: AGAATCTGTCCAAATTGGTCAGCTGGGCCCATAGCC...ACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGCCCTCAGTGTTAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR TCA 90 bp GAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGGGGTCCTCTGTTTGGTaGAGCCAGAGATACCCTAGC +
Preference number: 4 (lower is better)
Translates to: EAVYNHSFSGHSNQTGVLGSSVW*SQRYPS
Trigger: GCTAGGGTATCTCTGGCTTCACCAAACAGAGGACCC...CAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR TCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTGGGTCCTCTGTTTGGTaGAGCCAGAGATACCCTAGC +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIGSSVW*SQRYPS
Trigger: GCTAGGGTATCTCTGGCTTCACCAAACAGAGGACCC...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp CTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTACTGGGGGCTGCTGCTaGCTGGAGCTCACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LYFVLPENHVWFCKVCNSTGGCC*LELTSG
Trigger: GCCAGAAGTGAGCTCCAGTCAGCAGCAGCCCCCAGT...ACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR TCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTTGTCTGTGTGGTCTTTaGGCCCGTTGGTCATGCACC +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEICLCGL*ARWSCT
Trigger: GGTGCATGACCAACGGGCTCAAAGACCACACAGACA...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCCCACAGCTTCTCCTTaGGTTTCTTGGTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIPTASP*VSWWRS
Trigger: GCTCCTCCACCAAGAAACTCAAGGAGAAGCTGTGGG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAGGAACATCAACTAGGTaGCAGGCAACACATTTGAGG +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILGTSTR*QATHLR
Trigger: CCTCAAATGTGTTGCCTGTCACCTAGTTGATGTTCC...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAACAGGGCCTGTTTCATaGAGTAAGCCAGGAATTGAG +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILTGPVS*SKPGIE
Trigger: CTCAATTCCTGGCTTACTTCATGAAACAGGCCCTGT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGTTTGTTAGTCACAGCTaGGCAAGAGGACCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVFVSHS*ARGPWD
Trigger: GTCCCAGGGTCCTCTTGCTCAGCTGTGACTAACAAA...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGCTACCCCAGGTCTTTTaGGAGCAATGCTTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVLPQVF*EQCFEA
Trigger: GGCCTCAAAGCATTGCTCGCAAAAGACCTGGGGTAG...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGGCTTACCTGGTGGGGTaGCTAAATCATCGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVAYLVG*LNHRVP
Trigger: TGGGACACGATGATTTAGGCACCCCACCAGGTAAGC...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAGCAGATATGAAAGGTaGTGTGGACAACAGCTCACC +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILSRYER*CGQQLT
Trigger: GGTGAGCTGTTGTCCACAGCACCTTTCATATCTGCT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCCTGCTGAGCTCAGCTaGTCTTTCATCCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: EAVYNHSFSGHSNQTGVLPAELS*SFILVW
Trigger: CCAGACCAGGATGAAAGAGCAGCTGAGCTCAGCAGG...CAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp TTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTGGAACTCACGGAAATTaGGGAGCGCGGTCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: FPLYFVLPENHVWFCKVCGTHGN*GARSAC
Trigger: GCACGCAGACCGCGCTCCGCAATTTCCGTGAGTTCC...ACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp GGGCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTTTCTCCGGACACACTCTCTACTTTGTGTTaGCTGAGAACCACGTATGGT +
Preference number: 4 (lower is better)
Translates to: GHRKGNEKRCIITVSPDTLSTLC*LRTTYG
Trigger: ACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAG...TGTGTCCGGAGAAACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAGTCACAAGAGTCTCTaGTCCGGTTACAGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILSHKSL*SGYSLA
Trigger: AGCTAGACTGTAACCGGACCAGAGACTCTTGTGACT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGTGTCAAGGACAGGGCTaGTCCATCTACTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVCQGQG*SIYSSC
Trigger: ACAGGAGGAGTAGATGGACCAGCCCTGTCCTTGACA...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp AAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCACCTGGCTGGGCAGATaGGACAGGAACTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: KRCIITVSPDTVTKLESCTWLGR*DRNSSE
Trigger: CTCTGAAGAGTTCCTGTCCCATCTGCCCAGCCAGGT...GCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTACCTGGCTGGGCAGATaGGACAGGAACTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEITWLGR*DRNSSE
Trigger: CTCTGAAGAGTTCCTGTCCCATCTGCCCAGCCAGGT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTACTTAGTGGAATAAGCTaGTATGCACTGTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILLSGIS*YALCCG
Trigger: GCCACAGCACAGTGCATACCAGCTTATTCCACTAAG...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGATCCCGTGACACACTCTaGTGGAGCCGCTCCGACTCT +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRSRDTL*WSRSDS
Trigger: AGAGTCGGAGCGGCTCCACCAGAGTGTGTCACGGGA...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGATGGCCTCCATTTGGGTaGGCGGCCGGTGGATGTACA +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRWPPFG*AAGGCT
Trigger: TGTACATCCACCGGCCGCCCACCCAAATGGAGGCCA...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGAGGTAGAAGGGGGACTTaGCCTCCATTTGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRGRRGT*PPFGWA
Trigger: CGCCCACCCAAATGGAGGCCAAGTCCCCCTTCTACC...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGAAAGATTACAACCTCTaGAGTAGTTATTGCTACCTT +
Preference number: 4 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGKDYNL*SSYCYL
Trigger: AAGGTAGCAATAACTACTCCAGAGGTTGTAATCTTT...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGGCAACAATCAGATTCTaGTCAACCACTGAACATGGA +
Preference number: 4 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRATIRF*STTEHG
Trigger: TCCATGTTCAGTGGTTGACCAGAATCTGATTGTTGC...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp GCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAATTGGCCAAGCTGTTaGGTTCGTATTCGGACCCAT +
Preference number: 4 (lower is better)
Translates to: AQEGEREAVYNHSFSGHSNWPSC*VRIRTH
Trigger: ATGGGTCCGAATACGAACCCAACAGCTTGGCCAATT...ACTGTGTCCGGAGAAACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTCCCCTCTCTTGGTTTTaGCATTCAAGTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: AQEGEREAVYNHSFSGHSPLSWF*HSSLQC
Trigger: ACACTGGAGACTTGAATGCCAAAACCAAGAGAGGGG...ACTGTGTCCGGAGAAACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR TCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAGGACAGATTCTCAGATaGGGTATGAAGACAATCCTC +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILGQILR*GMKTIL
Trigger: GAGGATTGTCTTCATACCTCATCTGAGAATCTGTCC...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTTTGCGAGCAATGCTTTaGGGCCTTTGGGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEILRAML*GLWVWG
Trigger: ACCCCAAACCCAAAGGCCTCAAAGCATTGCTCGCAA...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTACTGGGGGCTGCTGCTaGCTGGAGCTCACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCTGGCC*LELTSG
Trigger: GCCAGAAGTGAGCTCCAGTCAGCAGCAGCCCCCAGT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTACTGGCTGTTGTACTTaGCCACAGTGGACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEITGCCT*PQWTGE
Trigger: CTCTCCTGTCCACTGTGGTCAAGTACAACAGCCAGT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTACACAGTTTTCCAGCTTaGCCTTCTTGGCTAAGTTTG +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILHSFPA*PSWLSL
Trigger: CAAACTTAGCCAAGAAGGTCAAGCTGGAAAACTGTG...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGTCCATCAGATGCCACTaGAGATTCGCCCTCCTGATT +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVSIRCH*RFALLI
Trigger: AATCAGGAGGGCGAATCTTCAGTGGCATCTGATGGA...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAAGAGAGGGTGGATATaGACTTTTTCTCTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILKRGWI*TFSLPG
Trigger: ACCGGGAAGAGAAAAAGTTCATATCCACCCTCTCTT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp GAATTAACACTGAGGGCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTAGGAGGCGGAGACGATaGAATTGCCATTGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: ELTLRAQEGEREAVYNHSRRRRR*NCHCWS
Trigger: ACTCCAACAATGGCAATTTCATCGTCTCCGCCTCCT...ACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGCCCTCAGTGTTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTACTACAGCCCCACATTaGTGTCAGGTTCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEITTAPH*CQVPMG
Trigger: TCCCATGGGAACCTGACAGCAATGTGGGGCTGTAGT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGACTGCATTCTTCAGGATaGGGTCCAGGCCTCGGCGAA +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRLHSSG*GPGLGE
Trigger: TTCGCCGAGGCCTGGACCGCATCCTGAAGAATGCAG...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTAACGCGCGCCCGACATaGCTGCCTTACTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCNARPT*LPYSAP
Trigger: GGGTGCTGAGTAAGGCAGGCATGTCGGGCGCGCGTT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTCCCCGACACAAGGCTaGCTGCCCTCCAGAACCACC +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCSPTQG*LPSRTT
Trigger: GGTGGTTCTGGAGGGCAGGCAGCCTTGTGTCGGGGA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTGCTTACCTGGTGGGGTaGCTAAATCATCGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIAYLVG*LNHRVP
Trigger: TGGGACACGATGATTTAGGCACCCCACCAGGTAAGC...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTGGAAGCCAGAACAACTaGCTTAGAACGCCAACGAGG +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIGSQNN*LRTPTR
Trigger: CCTCGTTGGCGTTCTAAGGCAGTTGTTCTGGCTTCC...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGCCCAGGGGCAACTTGTaGTTCAGTCAACCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVPRGNL*FSQPVN
Trigger: ATTCACAGGTTGACTGAAGCACAAGTTGCCCCTGGG...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp AAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCACTGACTGGGCAGCCTaGTGGCTCAGATTGTTACAG +
Preference number: 4 (lower is better)
Translates to: KRCIITVSPDTVTKLESCTDWAA*WLRLLQ
Trigger: CTGTAACAATCTGAGCCAGCAGGCTGCCCAGTCAGT...GCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp ATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGCCACCTGACCCTAGCAGTCTTCTaGACAATTGGTCTGGAGATC +
Preference number: 4 (lower is better)
Translates to: ITVSPDTVTKLESCSSHLTLAVF*TIGLEI
Trigger: GATCTCCAGACCAATTGTCCAGAAGACTGCTAGGGT...CAGGTGGCTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp CTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTCTCAGTGGTTATGGCTaGAGCGACTGGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LYFVLPENHVWFCKVCNSLSGYG*SDWGLL
Trigger: CAGCAGCCCCCAGTCGCTCCAGCCATAACCACTGAG...ACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGTTGGTGATGTCTGTGTaGTCTTTGAGCCCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVLVMSV*SLSPLV
Trigger: GACCAACGGGCTCAAAGACCACACAGACATCACCAA...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCTGCTCCAACCCTGGCTaGCCCGAGCAGGTGACAGGG +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFCSNPG*PEQVTG
Trigger: CCCTGTCACCTGCTCGGGCCAGCCAGGGTTGGAGCA...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCGGTTCCTACCGCTGCTaGGAGCCGTGGGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCGSYRC*EPWEQP
Trigger: GGGCTGCTCCCACGGCTCCCAGCAGCGGTAGGAACC...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTGTAGGCAGAAAATACTaGGGAACCGCCAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIVGRKY*GTARLS
Trigger: GGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTAC...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGGAAGAAGGAAAAAGCTaGAGACGGTACAATAACATC +
Preference number: 4 (lower is better)
Translates to: DRRFPVGRKYWGTARLSREEGKS*RRYNNI
Trigger: GATGTTATTGTACCGTCTCCAGCTTTTTCCTTCTTC...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp AGTGAATTAACACTGAGGGCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACTCTTTCATCCTGGTCTaGTATGCACTGTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SELTLRAQEGEREAVYNHSFILV*YALCCG
Trigger: GCCACAGCACAGTGCATACCAGACCAGGATGAAAGA...GTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGCCCTCAGTGTTAATTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGGCTGCTCTTTCATCCTaGTCTGGTATGCACTGTGCT +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVAALSS*SGMHCA
Trigger: AGCACAGTGCATACCAGACCAGGATGAAAGAGCAGC...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536272.5
CDS-3UTR CCA 90 bp GAACGAGAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGACTGGGCAGCCTGCTaGCTCAGATTGTTACAGATC +
Preference number: 4 (lower is better)
Translates to: EREAVYNHSFSGHSNQTGDWAAC*LRLLQI
Trigger: GATCTGTAACAATCTGAGCCAGCAGGCTGCCCAGTC...TCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTTCTCGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp ACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTAATTTGGCCGGCCACTGACTaGGCAGCCTGCTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: TLCCLRTTYGFVKSVTVIWPATD*AACWLR
Trigger: TCTGAGCCAGCAGGCTGCCCAGTCAGTGGCCGGCCA...AATTACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR TCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCACTGGGGGCTGCTGCTaGCTGGAGCTCACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFTGGCC*LELTSG
Trigger: GCCAGAAGTGAGCTCCAGTCAGCAGCAGCCCCCAGT...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCTCCGACTCTCCCGCTTaGCGCTGTCCGTCCGGGCAA +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCSDSPA*RCPSGQ
Trigger: TTGCCCGGACGGACAGCGTCAAGCGGGAGAGTCGGA...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGGGAACATCAACTAGGTaGCAGGCAACACATTTGAGG +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVGTSTR*QATHLR
Trigger: CCTCAAATGTGTTGCCTGTCACCTAGTTGATGTTCC...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCTGGAAAATGCCACATaGCCAAGGAGACCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEILENAT*PRRPFC
Trigger: ACAGAAGGGTCTCCTTGGTCATGTGGCATTTTCCAG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGGACGATCCATCCCACTaGTGGCACTTTATAGCTAAG +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVDDPSH*WHFIAK
Trigger: CTTAGCTATAAAGTGCCATCAGTGGGATGGATCGTC...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGTTGCCAGGAAGAAACTaGGCATCAGAGCTGACGATA +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVLPGRN*ASELTI
Trigger: TATCGTCAGCTCTGATGCTCAGTTTCTTCCTGGCAA...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGCATCATTCACGTTACTaGCCGCTTCCTACATCGTTC +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVHHSRY*PLPTSF
Trigger: GAACGATGTAGGAAGCGGTCAGTAACGTGAATGATG...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp GAATTAACACTGAGGGCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTAGCTCTGATACACACTaGAGTTGGTTTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ELTLRAQEGEREAVYNHSSSDTH*SWFSCQ
Trigger: CTGGCAGGAAAACCAACTTCAGTGTGTATCAGAGCT...ACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGCCCTCAGTGTTAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp GTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGCTACCCCAGGTCTTTTaGGAGCAATGCTTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: VYNHSFSGHSNQTGVLLKLPQVF*EQCFEA
Trigger: GGCCTCAAAGCATTGCTCGCAAAAGACCTGGGGTAG...CTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCATTCGTCAACCATCTaGGTCTGGGAGCTTGAATGG +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIHSSTI*VWELEW
Trigger: CCATTCAAGCTCCCAGACGCAGATGGTTGACGAATG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp AAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCCTGAGGCTTGGGTTTTaGCATCTGTGTCAAGGACAG +
Preference number: 4 (lower is better)
Translates to: KRCIITVSPDTVTKLESCLRLGF*HLCQGQ
Trigger: CTGTCCTTGACACAGATGGCAAAACCCAAGCCTCAG...GCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp GTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGGTGCTCACAGGCATTTaGATGGCCACCTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: VYNHSFSGHSNQTGVLLKVLTGI*MATCWL
Trigger: CAACCAACAGGTGGCCATGCAAATGCCTGTGAGCAC...CTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGATACATCAGATCCGCATaGTCCTGCAGCGTCCGCATG +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRYIRSA*SCSVRM
Trigger: CATGCGGACGCTGCAGGAGCATGCGGATCTGATGTA...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTATGGTCTCGGCTCACTaGAACCTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCMVSAH*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGACCAT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGAGGAAAGCTGGAAAATaGCACATGACCAAGGAGACC +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVRKAGK*HMTKET
Trigger: GGTCTCCTTGGTCATGTGGCATTTTCCAGCTTTCCT...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCTCGGCATCCCAAAGTaGTTGGATTATAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEILGIPK*LDYRRE
Trigger: CTCACGCCTATAATCCAAGCACTTTGGGATGCCGAG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp TTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTCATCCTGGTCTGGTATaGACTGTGCTGTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: FPLYFVLPENHVWFCKVCHPGLV*TVLWPQ
Trigger: CTGAGGCCACAGCACAGTGCATACCAGACCAGGATG...ACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp CAGAATTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTGGCAGTTGTACCAATaGAGAGCCGCCAGGTTCACG +
Preference number: 4 (lower is better)
Translates to: QNSLSTLCCLRTTYGFVKWQLYQ*RAARFT
Trigger: CGTGAACCTGGCGGCTCTGCATTGGTACAACTGCCA...CTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp CAGAATTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGGGGCCTCAGACAAGGTaGTGCAGCTCTGATACACAC +
Preference number: 4 (lower is better)
Translates to: QNSLSTLCCLRTTYGFVKGPQTR*CSSDTH
Trigger: GTGTGTATCAGAGCTGCAGCACCTTGTCTGAGGCCC...CTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp GAACGAGAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAACCAAACTGGAGTCTTaGTCAAGCCACCTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: EREAVYNHSFSGHSNQTGTKLES*SSHLVK
Trigger: CTTGACCAGGTGGCTTGAGCAAGACTCCAGTTTGGT...TCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTTCTCGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCGGCACCAAAGGTAAGTaGAGCGGGGAAGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCGTKGK*SGEGAR
Trigger: CCGGGCGCCTTCCCCGCTCCACTTACCTTTGGTGCC...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTATAGTCCCATGGCTATaGGCCCAGCTGACCAATTTG +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIIVPWL*AQLTNL
Trigger: CAAATTGGTCAGCTGGGCCCATAGCCATGGGACTAT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGATAGTCCCATGGCTATaGGCCCAGCTGACCAATTTG +
Preference number: 4 (lower is better)
Translates to: EAVYNHSFSGHSNQTGVLIVPWL*AQLTNL
Trigger: CAAATTGGTCAGCTGGGCCCATAGCCATGGGACTAT...CAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGAGTCACAAGAGTCTCTaGTCCGGTTACAGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVSHKSL*SGYSLA
Trigger: AGCTAGACTGTAACCGGACCAGAGACTCTTGTGACT...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCGTGAGTCTGAGGCTTaGGTTTTGCCATCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIRESEA*VLPSVS
Trigger: TGACACAGATGGCAAAACCCAAGCCTCAGACTCACG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGTGCATGGCCACCTGTTaGTTGGTGCCATGTGTACCA +
Preference number: 4 (lower is better)
Translates to: VYNHSFSGHSNQTGVLLKCMATC*LVPCVP
Trigger: TGGTACACATGGCACCAACCAACAGGTGGCCATGCA...CTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTGGGGCTGCTGCTGACTaGAGCTCACTTCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCGAAAD*SSLLAL
Trigger: CAGAGCCAGAAGTGAGCTCCAGTCAGCAGCAGCCCC...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTATGGCTGGAGCGACTaGGGGCTGCTGCTGACTGGA +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCYGWSD*GLLLTG
Trigger: TCCAGTCAGCAGCAGCCCCCAGTCGCTCCAGCCATA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATTGGGCTTACTGCACTaGTACACAGATCATTCAAGT +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILLGLLH*YTDHSS
Trigger: ACTTGAATGATCTGTGTACCAGTGCAGTAAGCCCAA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATCGTGACACACTCTGGTaGAGCCGCTCCGACTCTCCC +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDRDTLW*SRSDSP
Trigger: GGGAGAGTCGGAGCGGCTCCACCAGAGTGTGTCACG...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTCTGTGGCCTCCTTCCTaGCAGTCAGGTAGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCLWPPS*QSGRRG
Trigger: CCCCCTTCTACCTGACTGCCAGGAAGGAGGCCACAG...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCTGCTCCAACCCTGGCTaGCCCGAGCAGGTGACAGGG +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCCSNPG*PEQVTG
Trigger: CCCTGTCACCTGCTCGGGCCAGCCAGGGTTGGAGCA...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTCAGGCTGGAGTGCAGTaGCATGGTCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCQAGVQ*HGLGSL
Trigger: CAGTGAGCCGAGACCATGCCACTGCACTCCAGCCTG...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTTCTTTCATCCTGGTCTaGTATGCACTGTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEISFILV*YALCCG
Trigger: GCCACAGCACAGTGCATACCAGACCAGGATGAAAGA...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536272.5
CDS-3UTR CCA 90 bp TTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTTCTGCGTGCTCCGGATaGTTTTCTCGTTCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: FPLYFVLPENHVWFCKVCSACSG*FSRSAP
Trigger: GGGAGCAGAACGAGAAAACCATCCGGAGCACGCAGA...ACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGTGCCCTTCTCACACATaGTCTTCACCATCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: EAVYNHSFSGHSNQTGVLCPSHT*SSPSWP
Trigger: TGGCCAAGATGGTGAAGACCATGTGTGAGAAGGGCA...CAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR TCA 90 bp CAGAATTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTTGCGAGCAATGCTTTaGGGCCTTTGGGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: QNSLSTLCCLRTTYGFVKLRAML*GLWVWG
Trigger: ACCCCAAACCCAAAGGCCTCAAAGCATTGCTCGCAA...CTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR TCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTACTGCATTCATTCCCTTaGTGTCTGAATTTAAATGGC +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILLHSFP*CLNLNG
Trigger: GCCATTTAAATTCAGACATCAAGGGAATGAATGCAG...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp TTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAAGTCTCCAGTGTCCTaGCCCATCCACTCCAAGTAC +
Preference number: 4 (lower is better)
Translates to: FPLYFVLPENHVWFCKVCKSPVS*PIHSKY
Trigger: GTACTTGGAGTGGATGGGTCAGGACACTGGAGACTT...ACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR TCA 90 bp GTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGGGTTCACGACTGGCTTaGTGGATAAGTAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: VYNHSFSGHSNQTGVLLKGSRLA*WISRKG
Trigger: CCCCTTTCTACTTATCCATCAAGCCAGTCGTGAACC...CTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp AGTGAATTAACACTGAGGGCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACGTCTTTTGCGAGCAATaGTTTGAGGCCTTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: SELTLRAQEGEREAVYNHVFCEQ*FEAFGF
Trigger: AAACCCAAAGGCCTCAAAGCATTGCTCGCAAAAGAC...GTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGCCCTCAGTGTTAATTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAGTATTTGGGCTTACTaGACTGGTACACAGATCATT +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILSIWAY*TGTQII
Trigger: AATGATCTGTGTACCAGTGCAGTAAGCCCAAATACT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTCTGCATTCTTCAGGATaGGGTCCAGGCCTCGGCGAA +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCLHSSG*GPGLGE
Trigger: TTCGCCGAGGCCTGGACCGCATCCTGAAGAATGCAG...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTAGATCCGCATGCTCCTaGAGCGTCCGCATGTTCAGG +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCRSACS*SVRMFR
Trigger: CCTGAACATGCGGACGCTGCAGGAGCATGCGGATCT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCCGCAGCCCCATCCTCTaGTCCTCATACCACACGCTG +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFRSPIL*SSYHTL
Trigger: CAGCGTGTGGTATGAGGAGCAGAGGATGGGGCTGCG...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAAACAGCTTTTAGGCTaGTCAGACACAGTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILKQLLG*SDTVLS
Trigger: TGAAAGAACTGTGTCTGAGCAGCCTAAAAGCTGTTT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTAGCAGATATGAAAGGTaGTGTGGACAACAGCTCACC +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEISRYER*CGQQLT
Trigger: GGTGAGCTGTTGTCCACAGCACCTTTCATATCTGCT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATCAAGTACAGCAAGATaGTTCCGTTTCTACAAGAGT +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILSSTAR*FRFYKS
Trigger: ACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAAGTCTGAAGCCAGATaGTCTTTGGTTTTCTTACAG +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILKSEAR*SLVFLQ
Trigger: CTGTAAGAAAACCAAAGAGCATCTGGCTTCAGACTT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATTTGCGGAGCGCGGTCTaGGTGCTCCGGATGGTTTTC +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDLRSAV*VLRMVF
Trigger: GAAAACCATCCGGAGCACGCAGACCGCGCTCCGCAA...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536272.5
CDS-3UTR GCA 90 bp AAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCGGACCCATCCTTCTaGCTGGCATCAACAAAGAAA +
Preference number: 4 (lower is better)
Translates to: KRCIITVSPDTVTKLESCSDPSF*LASTKK
Trigger: TTTCTTTGTTGATGCCAGGCAGAAGGATGGGTCCGA...GCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp TCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTATCCTGCCAGGGATGTTaGCCTTCTCACACATGGTCT +
Preference number: 4 (lower is better)
Translates to: SLSTLCCLRTTYGFVKSVSCQGC*PSHTWS
Trigger: AGACCATGTGTGAGAAGGGCAACATCCCTGGCAGGA...TACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GAACGAGAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAAGTCACAAGAGTCTCTaGTCCGGTTACAGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: EREAVYNHSFSGHSNQTGSHKSL*SGYSLA
Trigger: AGCTAGACTGTAACCGGACCAGAGACTCTTGTGACT...TCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTTCTCGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp CAGAATTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTGTCAAGGACAGGGCTaGTCCATCTACTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QNSLSTLCCLRTTYGFVKCQGQG*SIYSSC
Trigger: ACAGGAGGAGTAGATGGACCAGCCCTGTCCTTGACA...CTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGTCTGGACAATTGGTCTaGAGATCACAGAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: VYNHSFSGHSNQTGVLLKSGQLV*RSQRGM
Trigger: CATCCCCCTCTGTGATCTCCAGACCAATTGTCCAGA...CTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCGGGGCTGCTGCTGACTaGAGCTCACTTCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: IHMRTSGAFRYVASSHIIGAAAD*SSLLAL
Trigger: CAGAGCCAGAAGTGAGCTCCAGTCAGCAGCAGCCCC...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATCTCAGTGGTTATGGCTaGAGCGACTGGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDLSGYG*SDWGLL
Trigger: CAGCAGCCCCCAGTCGCTCCAGCCATAACCACTGAG...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGGGCTTTGGTAGTATTTaGGCTTACTGCACTGGTACA +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVGFGSI*AYCTGT
Trigger: TGTACCAGTGCAGTAAGCCCAAATACTACCAAAGCC...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCCCTCGGCGAATAGCATaGAGCGAGGTGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFPRRIA*SEVARK
Trigger: CTTCCTGGCCACCTCGCTCCATGCTATTCGCCGAGG...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCCGTGACACACTCTGGTaGAGCCGCTCCGACTCTCCC +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCRDTLW*SRSDSP
Trigger: GGGAGAGTCGGAGCGGCTCCACCAGAGTGTGTCACG...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCGACTTGGCCTCCATTTaGGTGGGCGGCCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCDLASI*VGGRWM
Trigger: CATCCACCGGCCGCCCACCCAAATGGAGGCCAAGTC...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATGGTAGAAGGGGGACTTaGCCTCCATTTGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDGRRGT*PPFGWA
Trigger: CGCCCACCCAAATGGAGGCCAAGTCCCCCTTCTACC...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTAGGTTTAGAGCTGACTaGAAGCCAGAACAACTGCCT +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIRFRAD*KPEQLP
Trigger: AGGCAGTTGTTCTGGCTTCCAGTCAGCTCTAAACCT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAAACCCAAAGGTAAGTaGAGAAAACGCTCTTTACCT +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILKPKGK*RKRSLP
Trigger: AGGTAAAGAGCGTTTTCTCCACTTACCTTTGGGTTT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGAACGCAGGGGACTCCTTaGCTTTTCTCACTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRTQGTP*LFSLGS
Trigger: GCTTCCAAGTGAGAAAAGCCAAGGAGTCCCCTGCGT...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp TTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTGCCCACACTGGTAATTaGCCAAGCTGTTGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: FPLYFVLPENHVWFCKVCAHTGN*PSCWVR
Trigger: ACGAACCCAACAGCTTGGCCAATTACCAGTGTGGGC...ACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGTTCTTGCCAAGGGCCTaGCAGTTGTACCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: VYNHSFSGHSNQTGVLLKFLPRA*QLYQCR
Trigger: TCTGCATTGGTACAACTGCCAGGCCCTTGGCAAGAA...CTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
3UTR CAA 72 bp GGCCTGTTTCATGAAGTAAGCCAGGAATTGAGCTACTaGGAAACTTTTGCCCCAAGCTACCTCCATATGCCT +
Preference number: 4 (lower is better)
Translates to: GLFHEVSQELSY*ETFAPSYLHMP
Trigger: AGGCATATGGAGGTAGCTTGGGGCAAAAGTTTCCAAGTAGCTCAATTCCTGGCTTACTTCATGAAACAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCAGCCTCCGGGAGACCTaGGTGAACGAGACAAAGGTG +
Preference number: 4 (lower is better)
Translates to: IHMRTSGAFRYVASSHIISLRET*VNETKV
Trigger: CACCTTTGTCTCGTTCACTCAGGTCTCCCGGAGGCT...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATGCATTTTACCTGAGTaGAATGGTTTCAAACTGCAT +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILCILPE*NGFKLH
Trigger: ATGCAGTTTGAAACCATTTCACTCAGGTAAAATGCA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTATTCTGGTCAACCACTaGACATGGAGAACTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIILVNH*TWRTSA
Trigger: TGCAGAAGTTCTCCATGTTCAGTGGTTGACCAGAAT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCAGGCAGGTGGATCACTaGGGTCGGAGTTCGAGACCA +
Preference number: 4 (lower is better)
Translates to: IHMRTSGAFRYVASSHIIRQVDH*GRSSRP
Trigger: TGGTCTCGAACTCCGACCTCAGTGATCCACCTGCCT...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp GTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGAAGGTGCTGCAGCTCTaGTACACACTGAAGTTGGTT +
Preference number: 4 (lower is better)
Translates to: VYNHSFSGHSNQTGVLLKKVLQL*YTLKLV
Trigger: AACCAACTTCAGTGTGTATCAGAGCTGCAGCACCTT...CTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp CTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTACTACAGCCCCACATTaGTGTCAGGTTCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: LYFVLPENHVWFCKVCNSTTAPH*CQVPMG
Trigger: TCCCATGGGAACCTGACAGCAATGTGGGGCTGTAGT...ACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTGATCACAGAGGGGGATaGAGACATACCGTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCDHRGG*RHTVWV
Trigger: GACCCACACGGTATGTCTGCATCCCCCTCTGTGATC...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTATAATGGGTAAACTTTaGCTGAAGCGTGGACAGCCT +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIIMGKL*LKRGQP
Trigger: AGGCTGTCCACGCTTCAGGCAAAGTTTACCCATTAT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGAGGCATGTGCTACCATaGCCGGCTAATATTTGTATT +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVRHVLP*PANICI
Trigger: AATACAAATATTAGCCGGGCATGGTAGCACATGCCT...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp TCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAATGGTTTTCTCGTTCTaGTCCCTGCTGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SLSTLCCLRTTYGFVKSVMVFSF*SLLSSA
Trigger: AGCTGAGCTCAGCAGGGAGCAGAACGAGAAAACCAT...TACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCGGAGCGCGGTCTGCGTaGTCCGGATGGTTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCGARSA*SGWFSR
Trigger: ACGAGAAAACCATCCGGAGCACGCAGACCGCGCTCC...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536272.5
CDS-3UTR GCA 90 bp TTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTCAGCGGAGTTCAATTTaGTTCTGCTTCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FPLYFVLPENHVWFCKVCQRSSI*FCFRAS
Trigger: AGAGGCCCTGAAGCAGAAGCAAATTGAACTCCGCTG...ACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGATCTGGACAATTGGTCTaGAGATCACAGAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRSGQLV*RSQRGM
Trigger: CATCCCCCTCTGTGATCTCCAGACCAATTGTCCAGA...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp CTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTTCACAGGCATTTGCATaGCCACCTGTTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LYFVLPENHVWFCKVCNSSQAFA*PPVGWC
Trigger: GCACCAACCAACAGGTGGCCATGCAAATGCCTGTGA...ACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GAATTAACACTGAGGGCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTATCTGTTTGTTAGGATaGGATGTGCTCACAGGCATT +
Preference number: 4 (lower is better)
Translates to: ELTLRAQEGEREAVYNHSICLLG*DVLTGI
Trigger: AATGCCTGTGAGCACATCCCATCCTAACAAACAGAT...ACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGCCCTCAGTGTTAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCCTCAGTGGTTATGGCTaGAGCGACTGGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCLSGYG*SDWGLL
Trigger: CAGCAGCCCCCAGTCGCTCCAGCCATAACCACTGAG...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTGGCTTTGGTAGTATTTaGGCTTACTGCACTGGTACA +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIGFGSI*AYCTGT
Trigger: TGTACCAGTGCAGTAAGCCCAAATACTACCAAAGCC...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGAAGCCTCCCGAGTAGCTaGAATTACAGGCATGTGCTA +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRSLPSS*NYRHVL
Trigger: TAGCACATGCCTGTAATTCCAGCTACTCGGGAGGCT...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAAATTGGCAAAAGCTTaGGGCACAGATAAAACCATT +
Preference number: 4 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILKLAKA*GTDKTI
Trigger: AATGGTTTTATCTGTGCCCCAAGCTTTTGCCAATTT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp AAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTTTAAGGTAGATCCATaGAAGCCTGTGCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: KRCIITVSPDTVTKLESCFKVDP*KPVQCP
Trigger: TGGGCATTGCACAGGCTTCCATGGATCTACCTTAAA...GCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
3UTR CAA 72 bp ATTTCACAGGGCCTGTTTCATGAAGTAAGCCAGGAATaGAGCTACTTGGAAACTTTTGCCCCAAGCTACCTC +
Preference number: 4 (lower is better)
Translates to: ISQGLFHEVSQE*SYLETFAPSYL
Trigger: GAGGTAGCTTGGGGCAAAAGTTTCCAAGTAGCTCAATTCCTGGCTTACTTCATGAAACAGGCCCTGTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp GTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGGGACAGATTCTCAGATaGGGTATGAAGACAATCCTC +
Preference number: 4 (lower is better)
Translates to: VYNHSFSGHSNQTGVLLKGQILR*GMKTIL
Trigger: GAGGATTGTCTTCATACCTCATCTGAGAATCTGTCC...CTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR TCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCCCCACAGCTTCTCCTTaGGTTTCTTGGTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFPTASP*VSWWRS
Trigger: GCTCCTCCACCAAGAAACTCAAGGAGAAGCTGTGGG...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGAGACGATCCATCCCACTaGTGGCACTTTATAGCTAAG +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRDDPSH*WHFIAK
Trigger: CTTAGCTATAAAGTGCCATCAGTGGGATGGATCGTC...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTTGTATGGGCCTTATCTaGGACTACATTGGAGATCAT +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEICMGLI*DYIGDH
Trigger: ATGATCTCCAATGTAGTCTCAGATAAGGCCCATACA...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTGGGTAAACTTTGCCTaGAGCGTGGACAGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCWVNFA*SVDSLP
Trigger: AGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACCCA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCGGCAGGAGGATGGCTTaGACCCAGGAGGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCGRRMA*TQEAEI
Trigger: AATCTCTGCCTCCTGGGTTCAAGCCATCCTCCTGCC...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGTTTAGCCTATTCATATaGGGACTTCGGGTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVFSLFI*GLRVLL
Trigger: TAAAAGCACCCGAAGTCCTCATATGAATAGGCTAAA...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCGATCACAGAGGGGGATaGAGACATACCGTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: IHMRTSGAFRYVASSHIIDHRGG*RHTVWV
Trigger: GACCCACACGGTATGTCTGCATCCCCCTCTGTGATC...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCCCACCTGTTGGTTGGTaGCATGTGTACCAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCPPVGW*HVYQGV
Trigger: GACCCCCTGGTACACATGGCACCAACCAACAGGTGG...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGAAACAGCTTTTAGGCTaGTCAGACACAGTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVKQLLG*SDTVLS
Trigger: TGAAAGAACTGTGTCTGAGCAGCCTAAAAGCTGTTT...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGTCAAGTACAGCAAGATaGTTCCGTTTCTACAAGAGT +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVSSTAR*FRFYKS
Trigger: ACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGA...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGATGGCAGATGTGACATaGGGAATCAGTTTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: VYNHSFSGHSNQTGVLLKMADVT*GISLAD
Trigger: GTCTGCTAAACTGATTCCCCATGTCACATCTGCCAT...CTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTATCTGTTTGTTAGGATaGGATGTGCTCACAGGCATT +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIICLLG*DVLTGI
Trigger: AATGCCTGTGAGCACATCCCATCCTAACAAACAGAT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATACCTGGCTGGGCAGATaGGACAGGAACTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDTWLGR*DRNSSE
Trigger: CTCTGAAGAGTTCCTGTCCCATCTGCCCAGCCAGGT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCTATTACTTATTGTTTaGCTGATCTTGGATGGGCCC +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEILLLIV*LILDGP
Trigger: GGGCCCATCCAAGATCAGCCAAACAATAAGTAATAG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCGGGTCCTCTGTTTGGTaGAGCCAGAGATACCCTAGC +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCGSSVW*SQRYPS
Trigger: GCTAGGGTATCTCTGGCTTCACCAAACAGAGGACCC...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGAGGTTGCATTTTACCTaGGTGAAATGGTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVRLHFT*VKWFQT
Trigger: AGTTTGAAACCATTTCACTCAGGTAAAATGCAACCT...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTCACACCCTTTAAGGTaGCATCCTAGCTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCSHPLR*HPSFCA
Trigger: GGCACAGAAGCTAGGATGTCACCTTAAAGGGTGTGA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp TTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAAGGATACTTGGAGATaGGGAACTCACGGAAATTGC +
Preference number: 4 (lower is better)
Translates to: FPLYFVLPENHVWFCKVCKDTWR*GTHGNC
Trigger: GCAATTTCCGTGAGTTCCTCATCTCCAAGTATCCTT...ACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR TCA 90 bp ACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTAATTGCTCGTCAGCAAAGGTaGGCTTCATGGACTTGTGTG +
Preference number: 4 (lower is better)
Translates to: TLCCLRTTYGFVKSVTVIARQQR*ASWTCV
Trigger: CACACAAGTCCATGAAGCTCACCTTTGCTGACGAGC...AATTACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGAGTCTTTTGCGAGCAATaGTTTGAGGCCTTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRVFCEQ*FEAFGF
Trigger: AAACCCAAAGGCCTCAAAGCATTGCTCGCAAAAGAC...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATCTACCCCAGGTCTTTTaGGAGCAATGCTTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDLPQVF*EQCFEA
Trigger: GGCCTCAAAGCATTGCTCGCAAAAGACCTGGGGTAG...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATGTGCTCACAGGCATTTaGATGGCCACCTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDVLTGI*MATCWL
Trigger: CAACCAACAGGTGGCCATGCAAATGCCTGTGAGCAC...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCTCTTCAGAGGCAACTTaGTCATCCTGTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFSSEAT*SSCPGS
Trigger: GCTGCCTGGACAGGATGAGCAAGTTGCCTCTGAAGA...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTAGCTGGTATGCACTGTaGTGTGGCCTCAGTGGTTAT +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCSWYAL*CGLSGY
Trigger: ATAACCACTGAGGCCACAGCACAGTGCATACCAGCT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCAGAAGTAGACGATGTTaGGAGAACGCGCGCCCGACA +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCRSRRC*ENARPT
Trigger: TGTCGGGCGCGCGTTCTCGCAACATCGTCTACTTCT...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCCGACACAAGGCTGCCTaGCCTCCAGAACCACCTTAT +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCRHKAA*PPEPPY
Trigger: ATAAGGTGGTTCTGGAGGGCAGGCAGCCTTGTGTCG...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGTTTACTGAGGAACACTaGCTACAAGATGGAATGTTT +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVFTEEH*LQDGMF
Trigger: AAACATTCCATCTTGTAGGCAGTGTTCCTCAGTAAA...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATAGGAAAGCATCTCACTaGCCCAGGCCATCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDRKASH*PRPSFC
Trigger: GCAGAAAGATGGCCTGGGGCAGTGAGATGCTTTCCT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCGGATGTATGCACAGGTaGGACCATCTGGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: IHMRTSGAFRYVASSHIIGCMHR*DHLGEE
Trigger: TTCTTCCCCCAGATGGTCGCACCTGTGCATACATCC...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCTCATGTGCCCCCACATaGACAGGGATGTATGCACAG +
Preference number: 4 (lower is better)
Translates to: IHMRTSGAFRYVASSHIISCAPT*TGMYAQ
Trigger: CTGTGCATACATCCCTGTGCATGTGGGGGCACATGA...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCACTTTCCCACTCATGTaGCCCCACATGCACAGGGAT +
Preference number: 4 (lower is better)
Translates to: IHMRTSGAFRYVASSHIITFPLM*PHMHRD
Trigger: ATCCCTGTGCATGTGGGGGCACATGAGTGGGAAAGT...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTGTCTGGTATGCACTGTaGTGTGGCCTCAGTGGTTAT +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCVWYAL*CGLSGY
Trigger: ATAACCACTGAGGCCACAGCACAGTGCATACCAGAC...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536272.5
CDS-3UTR GCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCCCTGCTGAGCTCAGCTaGTCTTTCATCCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCPAELS*SFILVW
Trigger: CCAGACCAGGATGAAAGAGCAGCTGAGCTCAGCAGG...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536272.5
CDS-3UTR CCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCAAGTGTTTCAGGTTTaGAATGAGGCTGCAAATAGT +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIQVFQV*NEAANS
Trigger: ACTATTTGCAGCCTCATTCCAAACCTGAAACACTTG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTAATTGTCTGGGAGCTTGAATaGAGGGAAGATGGGACTACC +
Preference number: 4 (lower is better)
Translates to: TLCCLRTTYGFVKSVTVIVWELE*REDGTT
Trigger: GGTAGTCCCATCTTCCCTCCATTCAAGCTCCCAGAC...AATTACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTCGTGAGTCTGAGGCTTaGGTTTTGCCATCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCRESEA*VLPSVS
Trigger: TGACACAGATGGCAAAACCCAAGCCTCAGACTCACG...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTCTGGACAATTGGTCTaGAGATCACAGAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCSGQLV*RSQRGM
Trigger: CATCCCCCTCTGTGATCTCCAGACCAATTGTCCAGA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCTGCATGGCCACCTGTTaGTTGGTGCCATGTGTACCA +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFCMATC*LVPCVP
Trigger: TGGTACACATGGCACCAACCAACAGGTGGCCATGCA...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATTCACAGGCATTTGCATaGCCACCTGTTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDSQAFA*PPVGWC
Trigger: GCACCAACCAACAGGTGGCCATGCAAATGCCTGTGA...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTTGGTGATGTCTGTGTaGTCTTTGAGCCCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCLVMSV*SLSPLV
Trigger: GACCAACGGGCTCAAAGACCACACAGACATCACCAA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGCTAGAAATTCCCTCATaGTACAAACTGTCTAGTTCA +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVLEIPS*YKLSSS
Trigger: TGAACTAGACAGTTTGTACCATGAGGGAATTTCTAG...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTAGACTCTCAAGTAGCTaGGATTACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCRLSSS*DYRHLP
Trigger: TGGCAGGTGCCTGTAATCCCAGCTACTTGAGAGTCT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGGCTTTTAACTATGTATaGGCCTTATCTGAGACTACA +
Preference number: 4 (lower is better)
Translates to: RFAILAGLPGLTTYCACVAFNYV*ALSETT
Trigger: TGTAGTCTCAGATAAGGCCCATACATAGTTAAAAGC...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGATTCTCAGCTGTGATATaGAGGAGAGAGTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRFSAVI*RREFWT
Trigger: AGTCCAGAACTCTCTCCTCCATATCACAGCTGAGAA...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp CTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTTGGTCTTCACCATCTTaGCCAGCTTGTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LYFVLPENHVWFCKVCNSWSSPS*PACSCQ
Trigger: TTGGCAAGAACAAGCTGGCCAAGATGGTGAAGACCA...ACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
3UTR CAA 72 bp TCCAAAGTCACAACTTTTCCCCCTCACAATTCTCTATaGTTTCCTGGCATTTGGTGCTATAGAGCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: SKVTTFPPHNSL*FPGIWCYRAEV
Trigger: GACTTCTGCTCTATAGCACCAAATGCCAGGAAACAATAGAGAATTGTGAGGGGGAAAAGTTGTGACTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCGGCTATGGGCCCAGCTaGCCAATTTGGACAGATTCT +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCGYGPS*PIWTDS
Trigger: AGAATCTGTCCAAATTGGTCAGCTGGGCCCATAGCC...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATCTGGAAAATGCCACATaGCCAAGGAGACCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDLENAT*PRRPFC
Trigger: ACAGAAGGGTCTCCTTGGTCATGTGGCATTTTCCAG...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGAGAGGTAACTCTTCTTTaGGGTCTTCACTGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKREVTLL*GLHCLH
Trigger: ATGCAAACAGTGAAGACCTCAAAGAAGAGTTACCTC...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTAACAAAGATTTTTACTaGGGAACACTGCCTACAAGA +
Preference number: 4 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEINKDFY*GTLPTR
Trigger: TCTTGTAGGCAGTGTTCCTCAGTAAAAATCTTTGTT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCTGGGTAAACTTTGCCTaGAGCGTGGACAGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCWVNFA*SVDSLP
Trigger: AGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACCCA...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp CTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTCTACTTTGTGTTGCCTaGGAACCACGTATGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LYFVLPENHVWFCKVCNSLLCVA*EPRMVL
Trigger: CAAAACCATACGTGGTTCTCAGGCAACACAAAGTAG...ACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATCTGAGGCTTGGGTTTTaGCATCTGTGTCAAGGACAG +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDLRLGF*HLCQGQ
Trigger: CTGTCCTTGACACAGATGGCAAAACCCAAGCCTCAG...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTCTCGTTCAACTTCACTaGAGGGATCTTGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCLVQLH*RDLGDV
Trigger: GACATCACCAAGATCCCTGCAGTGAAGTTGAACGAG...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCGGAAGCCAGAACAACTaGCTTAGAACGCCAACGAGG +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCGSQNN*LRTPTR
Trigger: CCTCGTTGGCGTTCTAAGGCAGTTGTTCTGGCTTCC...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGATCCTTCTCTGCTTTCTaGTCCTGTTTTAGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRSFSAF*SCFSSK
Trigger: CTTAGAGCTAAAACAGGAGCAGAAAGCAGAGAAGGA...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp ACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTAATTGTCTGGTATGCACTGTaGTGTGGCCTCAGTGGTTAT +
Preference number: 4 (lower is better)
Translates to: TLCCLRTTYGFVKSVTVIVWYAL*CGLSGY
Trigger: ATAACCACTGAGGCCACAGCACAGTGCATACCAGAC...AATTACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATATGGTTTTCTCGTTCTaGTCCCTGCTGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDMVFSF*SLLSSA
Trigger: AGCTGAGCTCAGCAGGGAGCAGAACGAGAAAACCAT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536272.5
CDS-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTACCCTAGCAGTCTTCTaGACAATTGGTCTGGAGATC +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCTLAVF*TIGLEI
Trigger: GATCTCCAGACCAATTGTCCAGAAGACTGCTAGGGT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCTGCATGGCCACCTGTTaGTTGGTGCCATGTGTACCA +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCCMATC*LVPCVP
Trigger: TGGTACACATGGCACCAACCAACAGGTGGCCATGCA...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGATTGGGCTTACTGCACTaGTACACAGATCATTCAAGT +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRLGLLH*YTDHSS
Trigger: ACTTGAATGATCTGTGTACCAGTGCAGTAAGCCCAA...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTCGCATGTTCAGGTACTaGCTGTTGTACTTGACCACA +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCRMFRY*LLYLTT
Trigger: TGTGGTCAAGTACAACAGCCAGTACCTGAACATGCG...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCCCATTCTCACCTCAATaGGGGGAGGGAGAGTTATCT +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFPFSPQ*GEGELS
Trigger: AGATAACTCTCCCTCCCCCCATTGAGGTGAGAATGG...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp AAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCCTTCATGGACTTGTGTaGCTTATTTCCTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KRCIITVSPDTVTKLESCLHGLV*LISFSF
Trigger: AAAGGAAAAGGAAATAAGCCACACAAGTCCATGAAG...GCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
3UTR CAA 72 bp ATGCCACATGACCAAGGAGACCCTTCTGTCACAGCTTaGGTTAGGTACTTCCATAAAATTCCTTTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: MPHDQGDPSVTA*VRYFHKIPFCK
Trigger: TTTGCAAAAAGGAATTTTATGGAAGTACCTAACCAAAGCTGTGACAGAAGGGTCTCCTTGGTCATGTGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTCCGAAAAGATCCCAGTaGTTCCTAACGGCAATTTCT +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCPKRSQ*FLTAIS
Trigger: AGAAATTGCCGTTAGGAATCACTGGGATCTTTTCGG...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTCCTTTACAGCAGATATaGAAGGTGCTGTGGACAACA +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCPLQQI*KVLWTT
Trigger: TGTTGTCCACAGCACCTTTCATATCTGCTGTAAAGG...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTTTATTGCATGCTTATaGTGTGCCTGGTACCGCACT +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCFIACL*CAWYRT
Trigger: AGTGCGGTACCAGGCACATCATAAGCATGCAATAAA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGAAGATTTATGTGGGATTaGATGAAGAGGAAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRRFMWD*MKRKWV
Trigger: AACCCACTTCCTCTTCATTCAATCCCACATAAATCT...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATCTCGTTCAACTTCACTaGAGGGATCTTGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDLVQLH*RDLGDV
Trigger: GACATCACCAAGATCCCTGCAGTGAAGTTGAACGAG...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGACCTTTTCCTTCCTATTaGCTGATTTTATGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRPFPSY*LILWVS
Trigger: AGAGACCCATAAAATCAGGCAATAGGAAGGAAAAGG...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp TCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTACAAGTGTTTCAGGTTTaGAATGAGGCTGCAAATAGT +
Preference number: 4 (lower is better)
Translates to: SLSTLCCLRTTYGFVKSVQVFQV*NEAANS
Trigger: ACTATTTGCAGCCTCATTCCAAACCTGAAACACTTG...TACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTATGGCAGATGTGACATaGGGAATCAGTTTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCMADVT*GISLAD
Trigger: GTCTGCTAAACTGATTCCCCATGTCACATCTGCCAT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCACCCTAGCAGTCTTCTaGACAATTGGTCTGGAGATC +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFTLAVF*TIGLEI
Trigger: GATCTCCAGACCAATTGTCCAGAAGACTGCTAGGGT...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCAAGTACCTAGTACAATaGGTGGCACACGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCKYLVQ*VAHAGT
Trigger: AGTGCCAGCGTGTGCCACCCATTGTACTAGGTACTT...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATCTTTGGCCAAACACATaGACAGGTGCTTCGCCATTT +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDLWPNT*TGASPF
Trigger: AAATGGCGAAGCACCTGTCCATGTGTTTGGCCAAAG...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTAATTTGCTTCAGGGCCTCTTaGGAACGCTTGAATTCCTTA +
Preference number: 4 (lower is better)
Translates to: TLCCLRTTYGFVKSVTVICFRAS*ERLNSL
Trigger: TAAGGAATTCAAGCGTTCCCAAGAGGCCCTGAAGCA...AATTACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR TCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCGCTCTCACATGGTGCTaGGAAATAAAACATAGGCAC +
Preference number: 4 (lower is better)
Translates to: IHMRTSGAFRYVASSHIIALTWC*EIKHRH
Trigger: GTGCCTATGTTTTATTTCTCAGCACCATGTGAGAGC...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCTCCAGTGGTATATGCTaGCCGAATAATGGGATGACA +
Preference number: 4 (lower is better)
Translates to: IHMRTSGAFRYVASSHIISSGIC*PNNGMT
Trigger: TGTCATCCCATTATTCGGTCAGCATATACCACTGGA...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCTTTATTGCATGCTTATaGTGTGCCTGGTACCGCACT +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFFIACL*CAWYRT
Trigger: AGTGCGGTACCAGGCACATCATAAGCATGCAATAAA...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTGTTTTTGCTTATATCTaGGGTATCAGAGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCVFAYI*GIRAWL
Trigger: CAGCCAAGCTCTGATACCTCAGATATAAGCAAAAAC...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCATTCTGGTCAACCACTaGACATGGAGAACTTCTGCA +
Preference number: 4 (lower is better)
Translates to: IHMRTSGAFRYVASSHIIILVNH*TWRTSA
Trigger: TGCAGAAGTTCTCCATGTTCAGTGGTTGACCAGAAT...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTTCCTTCCTATTGCCTaGTTTTATGGGTCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCFLPIA*FYGSLN
Trigger: GTTCAGAGACCCATAAAATCAGGCAATAGGAAGGAA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp CTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTACTCCTTGCAAGGGATaGCATAAATCTCTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LYFVLPENHVWFCKVCNSTPCKG*HKSLLF
Trigger: AAACAAGAGAGATTTATGTCATCCCTTGCAAGGAGT...ACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR GCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCTTAGGCTGCAGGCTTTaGCCAATAGTTCACATAGGT +
Preference number: 4 (lower is better)
Translates to: IHMRTSGAFRYVASSHIILGCRL*PIVHIG
Trigger: ACCTATGTGAACTATTGGGCAAAGCCTGCAGCCTAA...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGATTTACTGAGGAACACTaGCTACAAGATGGAATGTTT +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRFTEEH*LQDGMF
Trigger: AAACATTCCATCTTGTAGGCAGTGTTCCTCAGTAAA...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATATAATGGGTAAACTTTaGCTGAAGCGTGGACAGCCT +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDIMGKL*LKRGQP
Trigger: AGGCTGTCCACGCTTCAGGCAAAGTTTACCCATTAT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp ACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTAATTTGGAAGCCTGTGCAATaGCCAAAAGCTTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: TLCCLRTTYGFVKSVTVIWKPVQ*PKAFVL
Trigger: CAACACAAAAGCTTTTGGGCATTGCACAGGCTTCCA...AATTACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTATCTGTTTGTTAGGATaGGATGTGCTCACAGGCATT +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCICLLG*DVLTGI
Trigger: AATGCCTGTGAGCACATCCCATCCTAACAAACAGAT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCACTTTGCCTGAAGCGTaGACAGCCTTCCTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCTLPEA*TAFLKE
Trigger: TTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGT...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGAAAGCCAGATGCTCTTTaGTTTTCTTACAGGCAATTT +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRKPDAL*FSYRQF
Trigger: AAATTGCCTGTAAGAAAACCAAAGAGCATCTGGCTT...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGAAGAAACATGATGCTGTaGTATGGCATTTATTACACC +
Preference number: 4 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRRNMML*YGIYYT
Trigger: GGTGTAATAAATGCCATACCACAGCATCATGTTTCT...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR CAA 72 bp TTTTGCTTATATCTGAGGTATCAGAGCTTGGCTGTGTaGGAGGTAGAATTCATGGGCGAAAATGTGTTAACT +
Preference number: 4 (lower is better)
Translates to: FCLYLRYQSLAV*EVEFMGENVLT
Trigger: AGTTAACACATTTTCGCCCATGAATTCTACCTCCAACACAGCCAAGCTCTGATACCTCAGATATAAGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CAA 72 bp TTCACTTGTTTTTGCTTATATCTGAGGTATCAGAGCTaGGCTGTGTTGGAGGTAGAATTCATGGGCGAAAAT +
Preference number: 4 (lower is better)
Translates to: FTCFCLYLRYQS*AVLEVEFMGEN
Trigger: ATTTTCGCCCATGAATTCTACCTCCAACACAGCCAAGCTCTGATACCTCAGATATAAGCAAAAACAAGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCCACAGTTTTCCAGCTTaGCCTTCTTGGCTAAGTTTG +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCHSFPA*PSWLSL
Trigger: CAAACTTAGCCAAGAAGGTCAAGCTGGAAAACTGTG...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATCAGACCCTGTTCATGTaGATGTTTGTTGAATCCCTT +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDQTLFM*MFVESL
Trigger: AAGGGATTCAACAAACATTCACATGAACAGGGTCTG...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTAATAGGGAACGTGTCTaGCTCTCTCTAGTTTCTAAT +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCNRERV*LSLVSN
Trigger: ATTAGAAACTAGAGAGAGGCAGACACGTTCCCTATT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCTTAGGCTGCAGGCTTTaGCCAATAGTTCACATAGGT +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCLGCRL*PIVHIG
Trigger: ACCTATGTGAACTATTGGGCAAAGCCTGCAGCCTAA...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCGATTCTCCTTTCTCTTaGATTAGGCCAAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFDSPFS*IRPRAE
Trigger: TTCTGCTCTTGGCCTAATGCAAGAGAAAGGAGAATC...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTGTTGAACAGTCAAGCTaGATATACATAAGTGAACCC +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCVEQSS*IYISEP
Trigger: GGGTTCACTTATGTATATGCAGCTTGACTGTTCAAC...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTCAAGTGTTTCAGGTTTaGAATGAGGCTGCAAATAGT +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCQVFQV*NEAANS
Trigger: ACTATTTGCAGCCTCATTCCAAACCTGAAACACTTG...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCTCACAGACACCCTTCTaGTGCGTGAATCTTTTATCA +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFSQTPF*CVNLLS
Trigger: TGATAAAAGATTCACGCACCAGAAGGGTGTCTGTGA...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATTCGTGTCCCAAGTATTaGTGCCATCCTAAAATGATG +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDSCPKY*CHPKMM
Trigger: CATCATTTTAGGATGGCACCAATACTTGGGACACGA...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTAAACCCAAAGGTAAGTaGAGAAAACGCTCTTTACCT +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCKPKGK*RKRSLP
Trigger: AGGTAAAGAGCGTTTTCTCCACTTACCTTTGGGTTT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCGGGACAGGTTATACTTaGAATCTACCCAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFGTGYT*NLPRRD
Trigger: ATCTCTTCTGGGTAGATTCCAAGTATAACCTGTCCC...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR CAA 72 bp ATTAGGCTGCAGGCTTTGCCCAATAGTTCACATAGGTaGTATTTCAGTTTAAGTGCAGAACCAACAAAACAA +
Preference number: 4 (lower is better)
Translates to: IRLQALPNSSHR*YFSLSAEPTKQ
Trigger: TTGTTTTGTTGGTTCTGCACTTAAACTGAAATACAACCTATGTGAACTATTGGGCAAAGCCTGCAGCCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCGACAGGCAACACATTTaGGGCAGAGATGATTATTTA +
Preference number: 4 (lower is better)
Translates to: IHMRTSGAFRYVASSHIIDRQHI*GRDDYL
Trigger: TAAATAATCATCTCTGCCTCAAATGTGTTGCCTGTC...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTAACAAAGATTTTTACTaGGGAACACTGCCTACAAGA +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCNKDFY*GTLPTR
Trigger: TCTTGTAGGCAGTGTTCCTCAGTAAAAATCTTTGTT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTGTATGGCTTGAGAGATaGAATATTTGCCAAACAAAC +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCVWLER*NICQTN
Trigger: GTTTGTTTGGCAAATATTTCATCTCTCAAGCCATAC...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCAAACATAGGCACTTCTaGTTCAGGAGGTTTTCACAT +
Preference number: 4 (lower is better)
Translates to: IHMRTSGAFRYVASSHIIKHRHF*FRRFSH
Trigger: ATGTGAAAACCTCCTGAAGCAGAAGTGCCTATGTTT...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATCTGGCTAACATTTATTaGATGCTTATGATGTGCCTG +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDLANIY*MLMMCL
Trigger: CAGGCACATCATAAGCATGCAATAAATGTTAGCCAG...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTAAGTTGACGCACATTTaGATAAACCATCCGAATGAT +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCKLTHI*INHPND
Trigger: ATCATTCGGATGGTTTATCCAAATGTGCGTCAACTT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTCCTCAAAGAAGTCTTaGGAAATTCTGTTATGTCAG +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCSSKKS*EILLCQ
Trigger: CTGACATAACAGAATTTCCCAAGACTTCTTTGAGGA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATTATTGCCTGATTTTATaGGTCTCTGAACCCAACATC +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDYCLIL*VSEPNI
Trigger: GATGTTGGGTTCAGAGACCCATAAAATCAGGCAATA...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
3UTR CAA 72 bp TCCCTAGAAATTATTGTTACTCTTAATGAGCACTCTTaGAGCTCCTTTTTCACTTGTTGTTGCACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SLEIIVTLNEHS*SSFFTCCCTQS
Trigger: ACTCTGAGTGCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAATTTCTAGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
3UTR CAA 72 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTaGACCAGATTATCATGTTTGGTTTCTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVN*TRLSCLVSSSS
Trigger: ACTTGAAGAAGAAACCAAACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR TCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCTGCATTTTACCTGAGTaGAATGGTTTCAAACTGCAT +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFCILPE*NGFKLH
Trigger: ATGCAGTTTGAAACCATTTCACTCAGGTAAAATGCA...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCAGGTTGCATTTTACCTaGGTGAAATGGTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFRLHFT*VKWFQT
Trigger: AGTTTGAAACCATTTCACTCAGGTAAAATGCAACCT...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCAATAGGGAACGTGTCTaGCTCTCTCTAGTTTCTAAT +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCNRERV*LSLVSN
Trigger: ATTAGAAACTAGAGAGAGGCAGACACGTTCCCTATT...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCAAACATAGGCACTTCTaGTTCAGGAGGTTTTCACAT +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCKHRHF*FRRFSH
Trigger: ATGTGAAAACCTCCTGAAGCAGAAGTGCCTATGTTT...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCGAAATGGTTTCAAACTaGATTACCTACCATTATGCG +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFEMVSN*ITYHYA
Trigger: CGCATAATGGTAGGTAATGCAGTTTGAAACCATTTC...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCCTGGCTAACATTTATTaGATGCTTATGATGTGCCTG +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCLANIY*MLMMCL
Trigger: CAGGCACATCATAAGCATGCAATAAATGTTAGCCAG...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTCCTTCACTTGTTTTTaGTTATATCTGAGGTATCAG +
Preference number: 4 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCSFTCF*LYLRYQ
Trigger: CTGATACCTCAGATATAAGCAAAAACAAGTGAAGGA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCTCAAGCCTCGTAGGTTaGTGTACAACTTATTATCTT +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFSSLVG*CTTYYL
Trigger: AAGATAATAAGTTGTACAGCAACCTACGAGGCTTGA...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCAAGTTGACGCACATTTaGATAAACCATCCGAATGAT +
Preference number: 4 (lower is better)
Translates to: IHMRTSGAFRYVASSHIIKLTHI*INHPND
Trigger: ATCATTCGGATGGTTTATCCAAATGTGCGTCAACTT...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATCTTCTGTCACAGCTTTaGTTAGGTACTTCCATAAAA +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDLLSQL*LGTSIK
Trigger: TTTTATGGAAGTACCTAACCAAAGCTGTGACAGAAG...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CCA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCGCTTTTAACTATGTATaGGCCTTATCTGAGACTACA +
Preference number: 4 (lower is better)
Translates to: ALDLESENLHSPTYKLKFAFNYV*ALSETT
Trigger: TGTAGTCTCAGATAAGGCCCATACATAGTTAAAAGC...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CCA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATTCTAGAATTGAGATTTaGCCTTCTTCTGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDSRIEI*PSSGFF
Trigger: GAAAAACCCAGAAGAAGGCCAAATCTCAATTCTAGA...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR TCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCAGGTATATTTTTCTATaGCAGTGCTATAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCRYIFL*QCYSLQ
Trigger: CTGTAGGCTATAGCACTGTCATAGAAAAATATACCT...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCGAAATGGTTTCAAACTaGATTACCTACCATTATGCG +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCEMVSN*ITYHYA
Trigger: CGCATAATGGTAGGTAATGCAGTTTGAAACCATTTC...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR GCA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCTCCTTCACTTGTTTTTaGTTATATCTGAGGTATCAG +
Preference number: 4 (lower is better)
Translates to: IHMRTSGAFRYVASSHIISFTCF*LYLRYQ
Trigger: CTGATACCTCAGATATAAGCAAAAACAAGTGAAGGA...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR GCA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCATAAAACCATTCTATTaGCAGGAAGAAACTGAGCAT +
Preference number: 4 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCIKPFY*QEETEH
Trigger: ATGCTCAGTTTCTTCCTGGCAATAGAATGGTTTTAT...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS TCA 90 bp CTCCAAGGAGCTCCAGCTGCTCCAACCCTGGCTGGCCCGAGCAGGTaGCAGGGCAGTGGCCGGGCCCCAGTGGGGGCTCACTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LQGAPAAPTLAGPSR*QGSGRAPVGAHWQQ
Trigger: CTGCTGCCAGTGAGCCCCCACTGGGGCCCGGCCACTGCCCTGTCACCTGCTCGGGCCAGCCAGGGTTGGAGCAGCTGGAGCTCCTTGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS TCA 90 bp TCTTCCCGTGACACACTCTGGTGGAGCCGCTCCGACTCTCCCGCTTaGCGCTGTCCGTCCGGGCAAAGTAGGGCTGGTTTTGGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: SSRDTLWWSRSDSPA*RCPSGQSRAGFGGL
Trigger: AAGACCCCCAAAACCAGCCCTACTTTGCCCGGACGGACAGCGTCAAGCGGGAGAGTCGGAGCGGCTCCACCAGAGTGTGTCACGGGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CCA 90 bp ACACCTGCATTCTTCAGGATGCGGTCCAGGCCTCGGCGAATAGCATaGAGCGAGGTGGCCAGGAAGTCCGAGCCGTCGCTCTTCTTGACG +
Preference number: 5 (lower is better)
Translates to: TPAFFRMRSRPRRIA*SEVARKSEPSLFLT
Trigger: CGTCAAGAAGAGCGACGGCTCGGACTTCCTGGCCACCTCGCTCCATGCTATTCGCCGAGGCCTGGACCGCATCCTGAAGAATGCAGGTGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGACAGTACCACCAGCCTaGACACAGAGCCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGTVPPA*TQSPGA
Trigger: TGCCCCTGGGCTCTGTGTCAAGGCTGGTGGTACTGT...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS TCA 90 bp TGGGGGCTGCTGCTGACTGGAGCTCACTTCTGGCTCTGTGTTAACTaGGGGAGAAAGGGCTACCTCACAGGAGGAGACCTGGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: WGLLLTGAHFWLCVN*GRKGYLTGGDLAGQ
Trigger: CTGCCCAGCCAGGTCTCCTCCTGTGAGGTAGCCCTTTCTCCCTCAGTTAACACAGAGCCAGAAGTGAGCTCCAGTCAGCAGCAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 90 bp ATCCTGGTCTGGTATGCACTGTGCTGTGGCCTCAGTGGTTATGGCTaGAGCGACTGGGGGCTGCTGCTGACTGGAGCTCACTTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: ILVWYALCCGLSGYG*SDWGLLLTGAHFWL
Trigger: GAGCCAGAAGTGAGCTCCAGTCAGCAGCAGCCCCCAGTCGCTCCAGCCATAACCACTGAGGCCACAGCACAGTGCATACCAGACCAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374244.3
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGGAGCCCAGGGGCAACTaGTGCTTCAGTCAACCTGTG +
Preference number: 5 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGEPRGN*CFSQPV
Trigger: CACAGGTTGACTGAAGCACAAGTTGCCCCTGGGCTC...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS TCA 90 bp GCGCGGTCTGCGTGCTCCGGATGGTTTTCTCGTTCTGCTCCCTGCTaGGCTCAGCTGCTCTTTCATCCTGGTCTGGTATGCACTGTGCTG +
Preference number: 5 (lower is better)
Translates to: ARSACSGWFSRSAPC*AQLLFHPGLVCTVL
Trigger: CAGCACAGTGCATACCAGACCAGGATGAAAGAGCAGCTGAGCTCAGCAGGGAGCAGAACGAGAAAACCATCCGGAGCACGCAGACCGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374244.3
ENST00000536272.5
CDS GCA 90 bp GAGACCTGGCTGGGCAGATGGGACAGGAACTCTTCAGAGGCAACTTaGTCATCCTGTCCAGGCAGCTGCAGGGCAGACAAGGGGATACTG +
Preference number: 5 (lower is better)
Translates to: ETWLGRWDRNSSEAT*SSCPGSCRADKGIL
Trigger: CAGTATCCCCTTGTCTGCCCTGCAGCTGCCTGGACAGGATGAGCAAGTTGCCTCTGAAGAGTTCCTGTCCCATCTGCCCAGCCAGGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS GCA 90 bp CCTGCCACATCTCCTCCTCGTCAGAAAGGGAGAAGTAGACGATGTTaGGAGAACGCGCGCCCGACATGCCTGCCTTACTCAGCACCCACA +
Preference number: 5 (lower is better)
Translates to: PATSPPRQKGRSRRC*ENARPTCLPYSAPT
Trigger: TGTGGGTGCTGAGTAAGGCAGGCATGTCGGGCGCGCGTTCTCGCAACATCGTCTACTTCTCCCTTTCTGACGAGGAGGAGATGTGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS GCA 90 bp GCTAAGTTTGGGACAATTCCCCGAAGAGAGCGCAGCCCCATCCTCTaGTCCTCATACCACACGCTGCCCATGTCTGTGGCCTCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: AKFGTIPRRERSPIL*SSYHTLPMSVASFL
Trigger: CAGGAAGGAGGCCACAGACATGGGCAGCGTGTGGTATGAGGAGCAGAGGATGGGGCTGCGCTCTCTTCGGGGAATTGTCCCAAACTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CCA 90 bp GGAATAAGCTGGTATGCACTGTGCTGTGGCCTCAGTGGTTATGGCTaGAGCGACTGGGGGCTGCTGCTGACTGGAGCTCACTTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GISWYALCCGLSGYG*SDWGLLLTGAHFWL
Trigger: GAGCCAGAAGTGAGCTCCAGTCAGCAGCAGCCCCCAGTCGCTCCAGCCATAACCACTGAGGCCACAGCACAGTGCATACCAGCTTATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS CCA 90 bp CCATGTCTGTGGCCTCCTTCCTGGCAGTCAGGTAGAAGGGGGACTTaGCCTCCATTTGGGTGGGCGGCCGGTGGATGTACATGTACTTGT +
Preference number: 5 (lower is better)
Translates to: PCLWPPSWQSGRRGT*PPFGWAAGGCTCTC
Trigger: ACAAGTACATGTACATCCACCGGCCGCCCACCCAAATGGAGGCCAAGTCCCCCTTCTACCTGACTGCCAGGAAGGAGGCCACAGACATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CCA 90 bp CTGCTCTTTCATCCTGGTCTGGTATGCACTGTGCTGTGGCCTCAGTaGTTATGGCTGGAGCGACTGGGGGCTGCTGCTGACTGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: LLFHPGLVCTVLWPQ*LWLERLGAAADWSS
Trigger: TGAGCTCCAGTCAGCAGCAGCCCCCAGTCGCTCCAGCCATAACCACTGAGGCCACAGCACAGTGCATACCAGACCAGGATGAAAGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374244.3
ENST00000536272.5
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTACTCCGACTCTCCCGCTaGACGCTGTCCGTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILLRLSR*TLSVRA
Trigger: TGCCCGGACGGACAGCGTCAAGCGGGAGAGTCGGAG...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS TCA 90 bp GGGGCTCACTGGCAGCAGCTGTGGGAGCCAAGCCTCCGGGAGACCTaGGTGAACGAGACAAAGGTGAAGTTCTCACAGTTTTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: GAHWQQLWEPSLRET*VNETKVKFSQFSSL
Trigger: CAAGCTGGAAAACTGTGAGAACTTCACCTTTGTCTCGTTCACTCAGGTCTCCCGGAGGCTTGGCTCCCACAGCTGCTGCCAGTGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS TCA 90 bp CCTGGCAGTTGTACCAATGCAGAGCCGCCAGGTTCACGACTGGCTTaGTGGATAAGTAGAAAGGGGCATCCTCGTAGCGCATGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: PGSCTNAEPPGSRLA*WISRKGHPRSAWRE
Trigger: CTCCCGCCATGCGCTACGAGGATGCCCCTTTCTACTTATCCATCAAGCCAGTCGTGAACCTGGCGGCTCTGCATTGGTACAACTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS TCA 90 bp CTGGTCAAGCGGTGTCTGAGGAAGAGTCATAGGAGGCGGAGACGATaGAATTGCCATTGTTGGAGTGGCCGGCCACTGACTGGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: LVKRCLRKSHRRRRR*NCHCWSGRPLTGQP
Trigger: AGGCTGCCCAGTCAGTGGCCGGCCACTCCAACAATGGCAATTTCATCGTCTCCGCCTCCTATGACTCTTCCTCAGACACCGCTTGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CCA 90 bp AAATTGCCATTGTTGGAGTGGCCGGCCACTGACTGGGCAGCCTGCTaGCTCAGATTGTTACAGATCAGCACGAGCTGGTTGCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: KLPLLEWPATDWAAC*LRLLQISTSWLLWA
Trigger: GGCCCAGAGCAACCAGCTCGTGCTGATCTGTAACAATCTGAGCCAGCAGGCTGCCCAGTCAGTGGCCGGCCACTCCAACAATGGCAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CCA 90 bp GCGGAGACGATGAAATTGCCATTGTTGGAGTGGCCGGCCACTGACTaGGCAGCCTGCTGGCTCAGATTGTTACAGATCAGCACGAGCTGG +
Preference number: 5 (lower is better)
Translates to: AETMKLPLLEWPATD*AACWLRLLQISTSW
Trigger: CCAGCTCGTGCTGATCTGTAACAATCTGAGCCAGCAGGCTGCCCAGTCAGTGGCCGGCCACTCCAACAATGGCAATTTCATCGTCTCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTTTGCGAGCAATGCTTaGAGGCCTTTGGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGFASNA*RPLGLG
Trigger: CCCCAAACCCAAAGGCCTCAAAGCATTGCTCGCAAA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTGTGCTCACAGGCATTaGCATGGCCACCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGCAHRH*HGHLLV
Trigger: AACCAACAGGTGGCCATGCAAATGCCTGTGAGCACA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGACCCACAGCTTCTCCTaGAGTTTCTTGGTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGTHSFS*SFLVEE
Trigger: CTCCTCCACCAAGAAACTCAAGGAGAAGCTGTGGGT...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTCCTTAATGCTGAGTTaGCTTACCTGGTGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGSLMLS*LTWWGA
Trigger: GGCACCCCACCAGGTAAGCAAACTCAGCATTAAGGA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGGGCACACGCTGGCACTaGATGACTGTGTTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGGTRWH*MTVFSS
Trigger: GGAAGAAAACACAGTCATCAAGTGCCAGCGTGTGCC...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GGGCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTTTCTCCGGACACACCAAGGGCCTGGCAGTaGTACCAATGCAGAGCCGCC +
Preference number: 5 (lower is better)
Translates to: GHRKGNEKRCIITVSPDTPRAWQ*YQCRAA
Trigger: GGCGGCTCTGCATTGGTACAACTGCCAGGCCCTTGG...TGTGTCCGGAGAAACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS GCA 90 bp AGACCCTACACAGGAGGGACCAGCGTGAGTCTGAGGCTTGGGTTTTaGCATCTGTGTCAAGGACAGGGCTGGTCCATCTACTCCTCCTGT +
Preference number: 5 (lower is better)
Translates to: RPYTGGTSVSLRLGF*HLCQGQGWSIYSSC
Trigger: ACAGGAGGAGTAGATGGACCAGCCCTGTCCTTGACACAGATGGCAAAACCCAAGCCTCAGACTCACGCTGGTCCCTCCTGTGTAGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS GCA 90 bp AAATTGCGGAGCGCGGTCTGCGTGCTCCGGATGGTTTTCTCGTTCTaGTCCCTGCTGAGCTCAGCTGCTCTTTCATCCTGGTCTGGTATG +
Preference number: 5 (lower is better)
Translates to: KLRSAVCVLRMVFSF*SLLSSAALSSWSGM
Trigger: CATACCAGACCAGGATGAAAGAGCAGCTGAGCTCAGCAGGGAGCAGAACGAGAAAACCATCCGGAGCACGCAGACCGCGCTCCGCAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374244.3
ENST00000536272.5
CDS GCA 90 bp GGATACTTGGAGATGAGGAACTCACGGAAATTGCGGAGCGCGGTCTaGGTGCTCCGGATGGTTTTCTCGTTCTGCTCCCTGCTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: GYLEMRNSRKLRSAV*VLRMVFSFCSLLSS
Trigger: TGAGCTCAGCAGGGAGCAGAACGAGAAAACCATCCGGAGCACGCAGACCGCGCTCCGCAATTTCCGTGAGTTCCTCATCTCCAAGTATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CCA 90 bp CACATGGTCTTCACCATCTTGGCCAGCTTGTTCTTGCCAAGGGCCTaGCAGTTGTACCAATGCAGAGCCGCCAGGTTCACGACTGGCTTG +
Preference number: 5 (lower is better)
Translates to: HMVFTILASLFLPRA*QLYQCRAARFTTGL
Trigger: CAAGCCAGTCGTGAACCTGGCGGCTCTGCATTGGTACAACTGCCAGGCCCTTGGCAAGAACAAGCTGGCCAAGATGGTGAAGACCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGGCCCAGCTGACCAATTaGGACAGATTCTCAGATGAG +
Preference number: 5 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGAQLTN*DRFSDE
Trigger: CTCATCTGAGAATCTGTCCAAATTGGTCAGCTGGGC...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS GCA 90 bp TGCCCTTCTCACACATGGTCTTCACCATCTTGGCCAGCTTGTTCTTaGCAAGGGCCTGGCAGTTGTACCAATGCAGAGCCGCCAGGTTCA +
Preference number: 5 (lower is better)
Translates to: CPSHTWSSPSWPACS*QGPGSCTNAEPPGS
Trigger: TGAACCTGGCGGCTCTGCATTGGTACAACTGCCAGGCCCTTGGCAAGAACAAGCTGGCCAAGATGGTGAAGACCATGTGTGAGAAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS GCA 90 bp ATGAAATTGCCATTGTTGGAGTGGCCGGCCACTGACTGGGCAGCCTaGTGGCTCAGATTGTTACAGATCAGCACGAGCTGGTTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: MKLPLLEWPATDWAA*WLRLLQISTSWLLW
Trigger: CCAGAGCAACCAGCTCGTGCTGATCTGTAACAATCTGAGCCAGCAGGCTGCCCAGTCAGTGGCCGGCCACTCCAACAATGGCAATTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTTGAGGCCTTTGGGTTaGGGGTTCAAAGTCACTATC +
Preference number: 5 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGLRPLG*GFKVTI
Trigger: GATAGTGACTTTGAACCCCAAACCCAAAGGCCTCAA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGGGACTTGGCCTCCATTaGGGTGGGCGGCCGGTGGAT +
Preference number: 5 (lower is better)
Translates to: RFAILAGLPGLTTYCACVGLGLH*GGRPVD
Trigger: ATCCACCGGCCGCCCACCCAAATGGAGGCCAAGTCC...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS GCA 90 bp GATGGGATGTGCTCACAGGCATTTGCATGGCCACCTGTTGGTTGGTaGCATGTGTACCAGGGGGTCCTCTGTTTGGTGAAGCCAGAGATA +
Preference number: 5 (lower is better)
Translates to: DGMCSQAFAWPPVGW*HVYQGVLCLVKPEI
Trigger: TATCTCTGGCTTCACCAAACAGAGGACCCCCTGGTACACATGGCACCAACCAACAGGTGGCCATGCAAATGCCTGTGAGCACATCCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS GCA 90 bp TGGGGGTCTTTGAGCAGCTCGATGTCACCATACATCAGATCCGCATaGTCCTGCAGCGTCCGCATGTTCAGGTACTGGCTGTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: WGSLSSSMSPYIRSA*SCSVRMFRYWLLYL
Trigger: CAAGTACAACAGCCAGTACCTGAACATGCGGACGCTGCAGGAGCATGCGGATCTGATGTATGGTGACATCGAGCTGCTCAAAGACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CCA 90 bp TTGTTAGGATGGGATGTGCTCACAGGCATTTGCATGGCCACCTGTTaGTTGGTGCCATGTGTACCAGGGGGTCCTCTGTTTGGTGAAGCC +
Preference number: 5 (lower is better)
Translates to: LLGWDVLTGICMATC*LVPCVPGGPLFGEA
Trigger: GGCTTCACCAAACAGAGGACCCCCTGGTACACATGGCACCAACCAACAGGTGGCCATGCAAATGCCTGTGAGCACATCCCATCCTAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 90 bp GGCAGCTGCAGGGCAGACAAGGGGATACTGATCTGTTTGTTAGGATaGGATGTGCTCACAGGCATTTGCATGGCCACCTGTTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: GSCRADKGILICLLG*DVLTGICMATCWLV
Trigger: CACCAACCAACAGGTGGCCATGCAAATGCCTGTGAGCACATCCCATCCTAACAAACAGATCAGTATCCCCTTGTCTGCCCTGCAGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 90 bp TACATCAGATCCGCATGCTCCTGCAGCGTCCGCATGTTCAGGTACTaGCTGTTGTACTTGACCACAGTGGACAGGAGAGTGATAGGGCTG +
Preference number: 5 (lower is better)
Translates to: YIRSACSCSVRMFRY*LLYLTTVDRRVIGL
Trigger: CAGCCCTATCACTCTCCTGTCCACTGTGGTCAAGTACAACAGCCAGTACCTGAACATGCGGACGCTGCAGGAGCATGCGGATCTGATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGATAAAATTCTCTCCATaGACAGCCGAGATGGGGTTC +
Preference number: 5 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGIKFSP*TAEMGF
Trigger: GAACCCCATCTCGGCTGTCAATGGAGAGAATTTTAT...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGGGGGATCTGTGTTTTTaGCAGCTTGTTTGGTTAGCT +
Preference number: 5 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGGDLCF*QLVWLA
Trigger: AGCTAACCAAACAAGCTGCAAAAAACACAGATCCCC...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAGAGCCCAGGGGCAACTaGTGCTTCAGTCAACCTGTG +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILEPRGN*CFSQPV
Trigger: CACAGGTTGACTGAAGCACAAGTTGCCCCTGGGCTC...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGCAGAGCTTGGCTGTGTaGGAGGTAGAATTCATGGGC +
Preference number: 5 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRQSLAV*EVEFMG
Trigger: GCCCATGAATTCTACCTCCAACACAGCCAAGCTCTG...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS TCA 90 bp CACCTGTTGGTTGGTGCCATGTGTACCAGGGGGTCCTCTGTTTGGTaGAGCCAGAGATACCCTAGCAGTCTTCTGGACAATTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: HLLVGAMCTRGSSVW*SQRYPSSLLDNWSG
Trigger: TCCAGACCAATTGTCCAGAAGACTGCTAGGGTATCTCTGGCTTCACCAAACAGAGGACCCCCTGGTACACATGGCACCAACCAACAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS GCA 90 bp GGGATACTGATCTGTTTGTTAGGATGGGATGTGCTCACAGGCATTTaGATGGCCACCTGTTGGTTGGTGCCATGTGTACCAGGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: GILICLLGWDVLTGI*MATCWLVPCVPGGP
Trigger: AGGACCCCCTGGTACACATGGCACCAACCAACAGGTGGCCATGCAAATGCCTGTGAGCACATCCCATCCTAACAAACAGATCAGTATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGTTGATGATGACATCATaGCTGCATTCGTCAACCATC +
Preference number: 5 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGLMMTS*LHSSTI
Trigger: GATGGTTGACGAATGCAGCAATGATGTCATCATCAA...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGTCTGAGGCTTGGGTTTaGCCATCTGTGTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRSEAWV*PSVSRT
Trigger: TGTCCTTGACACAGATGGCAAAACCCAAGCCTCAGA...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATTGCATGGCCACCTGTaGGTTGGTGCCATGTGTACC +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILLHGHL*VGAMCT
Trigger: GGTACACATGGCACCAACCAACAGGTGGCCATGCAA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGTTCACTGCAGGGATCTaGGTGATGTCTGTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRFTAGI*VMSVWS
Trigger: AGACCACACAGACATCACCAAGATCCCTGCAGTGAA...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGCCTCGGAGGACGGCTTaGGCCAAACACATGGACAGG +
Preference number: 5 (lower is better)
Translates to: RFAILAGLPGLTTYCACVPRRTA*AKHMDR
Trigger: CCTGTCCATGTGTTTGGCCAAAGCCGTCCTCCGAGG...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS GCA 90 bp TCTTTGAGCAGCTCGATGTCACCATACATCAGATCCGCATGCTCCTaGAGCGTCCGCATGTTCAGGTACTGGCTGTTGTACTTGACCACA +
Preference number: 5 (lower is better)
Translates to: SLSSSMSPYIRSACS*SVRMFRYWLLYLTT
Trigger: TGTGGTCAAGTACAACAGCCAGTACCTGAACATGCGGACGCTGCAGGAGCATGCGGATCTGATGTATGGTGACATCGAGCTGCTCAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CCA 90 bp CCAGTTCAGAGGGCTCACTACAGTAGGAGAAGTCACAAGAGTCTCTaGTCCGGTTACAGTCTAGCTTTGCTTTCACTGGTCTCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: PVQRAHYSRRSHKSL*SGYSLALLSLVSQG
Trigger: ACCCTGGGAGACCAGTGAAAGCAAAGCTAGACTGTAACCGGACCAGAGACTCTTGTGACTTCTCCTACTGTAGTGAGCCCTCTGAACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 90 bp CATACCTGTGTTCTTTCAGGTACCTTTCGAGCCCACACTGGTAATTaGCCAAGCTGTTGGGTTCGTATTCGGACCCATCCTTCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: HTCVLSGTFRAHTGN*PSCWVRIRTHPSAW
Trigger: CCAGGCAGAAGGATGGGTCCGAATACGAACCCAACAGCTTGGCCAATTACCAGTGTGGGCTCGAAAGGTACCTGAAAGAACACAGGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGCACTACAGCCCCACATaGCTGTCAGGTTCCCATGGG +
Preference number: 5 (lower is better)
Translates to: RFAILAGLPGLTTYCACVHYSPT*LSGSHG
Trigger: CCCATGGGAACCTGACAGCAATGTGGGGCTGTAGTG...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGCAGGGGGTCCTCTGTTaGGTGAAGCCAGAGATACCC +
Preference number: 5 (lower is better)
Translates to: RFAILAGLPGLTTYCACVQGVLC*VKPEIP
Trigger: GGGTATCTCTGGCTTCACCAAACAGAGGACCCCCTG...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAAAGTAGGGCTGGTTTaGGGGGTCTTTGAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILKVGLV*GVFEQL
Trigger: GAGCTGCTCAAAGACCCCCAAAACCAGCCCTACTTT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGCTTAATGAGCACTCTTaGAGCTCCTTTTTCACTTGT +
Preference number: 5 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGLNEHS*SSFFTC
Trigger: ACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAG...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS TCA 90 bp GATGACATCATTGCTGCATTCGTCAACCATCTGCGTCTGGGAGCTTaGATGGAGGGAAGATGGGACTACCCCAGGTCTTTTGCGAGCAAT +
Preference number: 5 (lower is better)
Translates to: DDIIAAFVNHLRLGA*MEGRWDYPRSFASN
Trigger: ATTGCTCGCAAAAGACCTGGGGTAGTCCCATCTTCCCTCCATTCAAGCTCCCAGACGCAGATGGTTGACGAATGCAGCAATGATGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 90 bp TGTCAGGTTCCCATGGGAACCTTCAGAAAGCAAGTGTTTCAGGTTTaGAATGAGGCTGCAAATAGTCCCATGGCTATGGGCCCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: CQVPMGTFRKQVFQV*NEAANSPMAMGPAD
Trigger: GTCAGCTGGGCCCATAGCCATGGGACTATTTGCAGCCTCATTCCAAACCTGAAACACTTGCTTTCTGAAGGTTCCCATGGGAACCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 90 bp ACATCATTGCTGCATTCGTCAACCATCTGCGTCTGGGAGCTTGAATaGAGGGAAGATGGGACTACCCCAGGTCTTTTGCGAGCAATGCTT +
Preference number: 5 (lower is better)
Translates to: TSLLHSSTICVWELE*REDGTTPGLLRAML
Trigger: AAGCATTGCTCGCAAAAGACCTGGGGTAGTCCCATCTTCCCTCCATTCAAGCTCCCAGACGCAGATGGTTGACGAATGCAGCAATGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 90 bp GTGAGTCTGAGGCTTGGGTTTTGCCATCTGTGTCAAGGACAGGGCTaGTCCATCTACTCCTCCTGTCAGTTCTGCATTTGCCACAATGTA +
Preference number: 5 (lower is better)
Translates to: VSLRLGFCHLCQGQG*SIYSSCQFCICHNV
Trigger: TACATTGTGGCAAATGCAGAACTGACAGGAGGAGTAGATGGACCAGCCCTGTCCTTGACACAGATGGCAAAACCCAAGCCTCAGACTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 90 bp AATTGGCCAAGCTGTTGGGTTCGTATTCGGACCCATCCTTCTGCCTaGCATCAACAAAGAAAGAGGCAAGGTAGGCATCCAACTCCTTGC +
Preference number: 5 (lower is better)
Translates to: NWPSCWVRIRTHPSA*HQQRKRQGRHPTPC
Trigger: GCAAGGAGTTGGATGCCTACCTTGCCTCTTTCTTTGTTGATGCCAGGCAGAAGGATGGGTCCGAATACGAACCCAACAGCTTGGCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CCA 90 bp CTTTCAGGTACCTTTCGAGCCCACACTGGTAATTGGCCAAGCTGTTaGGTTCGTATTCGGACCCATCCTTCTGCCTGGCATCAACAAAGA +
Preference number: 5 (lower is better)
Translates to: LSGTFRAHTGNWPSC*VRIRTHPSAWHQQR
Trigger: TCTTTGTTGATGCCAGGCAGAAGGATGGGTCCGAATACGAACCCAACAGCTTGGCCAATTACCAGTGTGGGCTCGAAAGGTACCTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGGAAACAGACCCTCTCTaGGGACCCAGCTCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: RFAILAGLPGLTTYCACVETDPL*GPSSAS
Trigger: ACTTGCAGAGCTGGGTCCCAAGAGAGGGTCTGTTTC...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAGGTTACAGTCTAGCTTaGCTTTCACTGGTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILGYSLA*LSLVSQ
Trigger: CTGGGAGACCAGTGAAAGCAAAGCTAGACTGTAACC...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGCTGTCAGTTCTGCATTaGCCACAATGTAATAATCTT +
Preference number: 5 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGLSVLH*PQCNNL
Trigger: AAGATTATTACATTGTGGCAAATGCAGAACTGACAG...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGTTGCATGGCCACCTGTaGGTTGGTGCCATGTGTACC +
Preference number: 5 (lower is better)
Translates to: RFAILAGLPGLTTYCACVLHGHL*VGAMCT
Trigger: GGTACACATGGCACCAACCAACAGGTGGCCATGCAA...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGCTCTTCAGAGGCAACTaGCTCATCCTGTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RFAILAGLPGLTTYCACVLFRGN*LILSRQ
Trigger: CTGCCTGGACAGGATGAGCAAGTTGCCTCTGAAGAG...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATTCACTGCAGGGATCTaGGTGATGTCTGTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILFTAGI*VMSVWS
Trigger: AGACCACACAGACATCACCAAGATCCCTGCAGTGAA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATACTGGCTGTTGTACTaGACCACAGTGGACAGGAGA +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILYWLLY*TTVDRR
Trigger: TCTCCTGTCCACTGTGGTCAAGTACAACAGCCAGTA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGGAGCAGCCCAAGTCCTaGTCAGATGACCAAGTGTCG +
Preference number: 5 (lower is better)
Translates to: RFAILAGLPGLTTYCACVEQPKS*SDDQVS
Trigger: CGACACTTGGTCATCTGACAAGGACTTGGGCTGCTC...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTCTCTCCATTGACAGCCGAGATGGGGTTCCTACCGCTGCTGGGAGCCGTGGGCTGTTCTTCCTTCACTaGTTTTTGCTTATATCTGAG +
Preference number: 5 (lower is better)
Translates to: ILSIDSRDGVPTAAGSRGLFFLH*FLLISE
Trigger: CTCAGATATAAGCAAAAACAAGTGAAGGAAGAACAG...CCCACGGCTCCCAGCAGCGGTAGGAACCCCATCTCGGCTGTCAATGGAGAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGCCACCTGGCCCAGCTGACCAATTaGGACAGATTCTCAGATGAG +
Preference number: 5 (lower is better)
Translates to: ITVSPDTVTKLESCSSHLAQLTN*DRFSDE
Trigger: CTCATCTGAGAATCTGTCCAAATTGGTCAGCTGGGC...CAGGTGGCTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGGCGTACCGCGTGGCTTaGGTAGTATTTGGGCTTACT +
Preference number: 5 (lower is better)
Translates to: RFAILAGLPGLTTYCACVAYRVA*VVFGLT
Trigger: AGTAAGCCCAAATACTACCAAAGCCACGCGGTACGC...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGTCCTTAATGCTGAGTTaGCTTACCTGGTGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: RFAILAGLPGLTTYCACVSLMLS*LTWWGA
Trigger: GGCACCCCACCAGGTAAGCAAACTCAGCATTAAGGA...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGGGCACACGCTGGCACTaGATGACTGTGTTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: RFAILAGLPGLTTYCACVGTRWH*MTVFSS
Trigger: GGAAGAAAACACAGTCATCAAGTGCCAGCGTGTGCC...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTACTTGGCTTTTCTCACTaGGAAGCAGTGGACTCTTTC +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILLGFSH*EAVDSF
Trigger: GAAAGAGTCCACTGCTTCCAAGTGAGAAAAGCCAAG...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS TCA 90 bp CTATGGGCCCAGCTGACCAATTTGGACAGATTCTCAGATGAGGTATaGAGACAATCCTCCATGTTACAGGATCAGCAGTGTCACTCCTGC +
Preference number: 5 (lower is better)
Translates to: LWAQLTNLDRFSDEV*RQSSMLQDQQCHSC
Trigger: GCAGGAGTGACACTGCTGATCCTGTAACATGGAGGATTGTCTTCATACCTCATCTGAGAATCTGTCCAAATTGGTCAGCTGGGCCCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS TCA 90 bp CCCATGGCTATGGGCCCAGCTGACCAATTTGGACAGATTCTCAGATaGGGTATGAAGACAATCCTCCATGTTACAGGATCAGCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: PMAMGPADQFGQILR*GMKTILHVTGSAVS
Trigger: TGACACTGCTGATCCTGTAACATGGAGGATTGTCTTCATACCTCATCTGAGAATCTGTCCAAATTGGTCAGCTGGGCCCATAGCCATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 90 bp TTCTTGATGATGACATCATTGCTGCATTCGTCAACCATCTGCGTCTaGGAGCTTGAATGGAGGGAAGATGGGACTACCCCAGGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: FLMMTSLLHSSTICV*ELEWREDGTTPGLL
Trigger: CAAAAGACCTGGGGTAGTCCCATCTTCCCTCCATTCAAGCTCCCAGACGCAGATGGTTGACGAATGCAGCAATGATGTCATCATCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS-3UTR CAA 90 bp TTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTCACTACAGCCCCACATaGCTGTCAGGTTCCCATGGG +
Preference number: 5 (lower is better)
Translates to: FPLYFVLPENHVWFCKVCHYSPT*LSGSHG
Trigger: CCCATGGGAACCTGACAGCAATGTGGGGCTGTAGTG...ACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp ATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGCCACCTGTTGAGGCCTTTGGGTTaGGGGTTCAAAGTCACTATC +
Preference number: 5 (lower is better)
Translates to: ITVSPDTVTKLESCSSHLLRPLG*GFKVTI
Trigger: GATAGTGACTTTGAACCCCAAACCCAAAGGCCTCAA...CAGGTGGCTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp CAGAATTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGCAGGGGGTCCTCTGTTaGGTGAAGCCAGAGATACCC +
Preference number: 5 (lower is better)
Translates to: QNSLSTLCCLRTTYGFVKQGVLC*VKPEIP
Trigger: GGGTATCTCTGGCTTCACCAAACAGAGGACCCCCTG...CTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp GTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGTTGCATGGCCACCTGTaGGTTGGTGCCATGTGTACC +
Preference number: 5 (lower is better)
Translates to: VYNHSFSGHSNQTGVLLKLHGHL*VGAMCT
Trigger: GGTACACATGGCACCAACCAACAGGTGGCCATGCAA...CTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTGCGTACCGCGTGGCTTaGGTAGTATTTGGGCTTACT +
Preference number: 5 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIAYRVA*VVFGLT
Trigger: AGTAAGCCCAAATACTACCAAAGCCACGCGGTACGC...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTTGGTTTTGGGGGTCTTaGAGCAGCTCGATGTCACCA +
Preference number: 5 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIWFWGS*SSSMSP
Trigger: TGGTGACATCGAGCTGCTCAAAGACCCCCAAAACCA...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATCCAGCTTGACCTTCTaGGCTAAGTTTGGGACAATT +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILSSLTF*AKFGTI
Trigger: AATTGTCCCAAACTTAGCCAAGAAGGTCAAGCTGGA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTATGACCAAGTGTCGCTaGAGGATACTCCCCGACACA +
Preference number: 5 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIMTKCR*RILPDT
Trigger: TGTGTCGGGGAGTATCCTCAAGCGACACTTGGTCAT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATTTTCTTCCTCACTCTaGTTTCCCAAGGTGGCATGT +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILFSSSL*FPKVAC
Trigger: ACATGCCACCTTGGGAAACAAGAGTGAGGAAGAAAA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GACAGAAGGTTCCCAGTAGGCAGAAAATACTGGGGAACCGCCAGGCTTTCCAGGCACTGTTTGCATTCATaGATGCTTAAAGGTAACGTC +
Preference number: 5 (lower is better)
Translates to: DRRFPVGRKYWGTARLSRHCLHS*MLKGNV
Trigger: GACGTTACCTTTAAGCATCAATGAATGCAAACAGTG...CCTGGAAAGCCTGGCGGTTCCCCAGTATTTTCTGCCTACTGGGAACCTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCTCCAGGAGGCAGTTTaGTCTCATGGACTGAGCACT +
Preference number: 5 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEILQEAV*SHGLST
Trigger: AGTGCTCAGTCCATGAGACAAAACTGCCTCCTGGAG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTACCTCACAATTCTCTATaGTTTCCTGGCATTTGGTGC +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILPHNSL*FPGIWC
Trigger: GCACCAAATGCCAGGAAACAATAGAGAATTGTGAGG...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp CTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTAGGAACTCACGGAAATaGCGGAGCGCGGTCTGCGTG +
Preference number: 5 (lower is better)
Translates to: LYFVLPENHVWFCKVCNSRNSRK*RSAVCV
Trigger: CACGCAGACCGCGCTCCGCAATTTCCGTGAGTTCCT...ACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp GAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTGCTTCAGGGCCTCTaGGGAACGCTTGAATTCCTT +
Preference number: 5 (lower is better)
Translates to: EAVYNHSFSGHSNQTGVLLLQGL*GTLEFL
Trigger: AAGGAATTCAAGCGTTCCCAAGAGGCCCTGAAGCAG...CAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp TCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACCATCTTGGCCAGCTaGTTCTTGCCAAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SLSTLCCLRTTYGFVKSVTILAS*FLPRAW
Trigger: CCAGGCCCTTGGCAAGAACAAGCTGGCCAAGATGGT...TACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp GAATTAACACTGAGGGCACAGGAAGGGGAACGAGAAGCGGTGTATAATCACAGTAACCAAACTGGAGTCTaGCTCAAGCCACCTGGTCAA +
Preference number: 5 (lower is better)
Translates to: ELTLRAQEGEREAVYNHSNQTGV*LKPPGQ
Trigger: TTGACCAGGTGGCTTGAGCAAGACTCCAGTTTGGTT...ACTGTGATTATACACCGCTTCTCGTTCCCCTTCCTGTGCCCTCAGTGTTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS GCA 90 bp TTGATTTTCTTGATGATGACATCATTGCTGCATTCGTCAACCATCTaGGTCTGGGAGCTTGAATGGAGGGAAGATGGGACTACCCCAGGT +
Preference number: 5 (lower is better)
Translates to: LIFLMMTSLLHSSTI*VWELEWREDGTTPG
Trigger: ACCTGGGGTAGTCCCATCTTCCCTCCATTCAAGCTCCCAGACGCAGATGGTTGACGAATGCAGCAATGATGTCATCATCAAGAAAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 90 bp GAAAGCAAGTGTTTCAGGTTTGGAATGAGGCTGCAAATAGTCCCATaGCTATGGGCCCAGCTGACCAATTTGGACAGATTCTCAGATGAG +
Preference number: 5 (lower is better)
Translates to: ESKCFRFGMRLQIVP*LWAQLTNLDRFSDE
Trigger: CTCATCTGAGAATCTGTCCAAATTGGTCAGCTGGGCCCATAGCCATGGGACTATTTGCAGCCTCATTCCAAACCTGAAACACTTGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 90 bp CCGCAGGATGAGCTCGTCAGCAAAGGTGAGCTTCATGGACTTGTGTaGCTTATTTCCTTTTCCTTTACAGCGGAGTTCAATTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: PQDELVSKGELHGLV*LISFSFTAEFNLLL
Trigger: CAGAAGCAAATTGAACTCCGCTGTAAAGGAAAAGGAAATAAGCCACACAAGTCCATGAAGCTCACCTTTGCTGACGAGCTCATCCTGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp TCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAGAAACAGACCCTCTCTaGGGACCCAGCTCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: SLSTLCCLRTTYGFVKSVETDPL*GPSSAS
Trigger: ACTTGCAGAGCTGGGTCCCAAGAGAGGGTCTGTTTC...TACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTGGTTACAGTCTAGCTTaGCTTTCACTGGTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIGYSLA*LSLVSQ
Trigger: CTGGGAGACCAGTGAAAGCAAAGCTAGACTGTAACC...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGAATGCTTTGAGGCCTTaGGGTTTGGGGTTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: RFAILAGLPGLTTYCACVNALRP*GLGFKV
Trigger: GACTTTGAACCCCAAACCCAAAGGCCTCAAAGCATT...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGTGTGCTCACAGGCATTaGCATGGCCACCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: VYNHSFSGHSNQTGVLLKCAHRH*HGHLLV
Trigger: AACCAACAGGTGGCCATGCAAATGCCTGTGAGCACA...CTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp TTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTCTCTTCAGAGGCAACTaGCTCATCCTGTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: FPLYFVLPENHVWFCKVCLFRGN*LILSRQ
Trigger: CTGCCTGGACAGGATGAGCAAGTTGCCTCTGAAGAG...ACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTTTCAGGTACTGGCTGTaGTACTTGACCACAGTGGAC +
Preference number: 5 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIFRYWL*YLTTVD
Trigger: GTCCACTGTGGTCAAGTACAACAGCCAGTACCTGAA...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAAATCTTAAGGCAGCATaGGTTGAGTCTTCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILNLKAA*VESSLV
Trigger: TACCAGAGAAGACTCAACCAATGCTGCCTTAAGATT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTACCTTCTGTCACAGCTTaGGTTAGGTACTTCCATAAA +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILPSVTA*VRYFHK
Trigger: TTTATGGAAGTACCTAACCAAAGCTGTGACAGAAGG...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAATTGTTTGGCTGATCTaGGATGGGCCCTTTAATATC +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILIVWLI*DGPFNI
Trigger: GATATTAAAGGGCCCATCCAAGATCAGCCAAACAAT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATCTATTACTTATTGTTaGGCTGATCTTGGATGGGCC +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILSITYC*ADLGWA
Trigger: GGCCCATCCAAGATCAGCCAAACAATAAGTAATAGA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGGAGCCGGATGTCATTTaGCCAGATGCAGCTCTATTA +
Preference number: 5 (lower is better)
Translates to: RFAILAGLPGLTTYCACVEPDVI*PDAALL
Trigger: TAATAGAGCTGCATCTGGCAAAATGACATCCGGCTC...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTATCCTTTTCCTTCCTATaGCCTGATTTTATGGGTCTC +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILSFSFL*PDFMGL
Trigger: GAGACCCATAAAATCAGGCAATAGGAAGGAAAAGGA...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp TTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTGCGGAGACGATGAAATaGCCATTGTTGGAGTGGCCG +
Preference number: 5 (lower is better)
Translates to: FPLYFVLPENHVWFCKVCAETMK*PLLEWP
Trigger: CGGCCACTCCAACAATGGCAATTTCATCGTCTCCGC...ACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp GAACGAGAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGACCTCTCTACTTTGTGTaGCCTGAGAACCACGTATGG +
Preference number: 5 (lower is better)
Translates to: EREAVYNHSFSGHSNQTGPLYFV*PENHVW
Trigger: CCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGG...TCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTTCTCGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTTTGAGGCCTTTGGGTTaGGGGTTCAAAGTCACTATC +
Preference number: 5 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEILRPLG*GFKVTI
Trigger: GATAGTGACTTTGAACCCCAAACCCAAAGGCCTCAA...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTATGGCCACCTGTTGGTaGGTGCCATGTGTACCAGGG +
Preference number: 5 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCMATCW*VPCVPG
Trigger: CCCTGGTACACATGGCACCAACCAACAGGTGGCCAT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGAACCCACAGCTTCTCCTaGAGTTTCTTGGTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRTHSFS*SFLVEE
Trigger: CTCCTCCACCAAGAAACTCAAGGAGAAGCTGTGGGT...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAGGAGGTTTTCACATTTaGATCACAGATTGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILGGFHI*ITDWLF
Trigger: GAAAAGCCAATCTGTGATCAAAATGTGAAAACCTCC...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATACAGTACCACCAGCCTaGACACAGAGCCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDTVPPA*TQSPGA
Trigger: TGCCCCTGGGCTCTGTGTCAAGGCTGGTGGTACTGT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAGAAGTAAGCCAGGAATaGAGCTACTTGGAAACTTTT +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILEVSQE*SYLETF
Trigger: AAAAGTTTCCAAGTAGCTCAATTCCTGGCTTACTTC...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp TTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTGCCTCTTGGGAACGCTaGAATTCCTTATCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: FPLYFVLPENHVWFCKVCASWER*NSLSLV
Trigger: CACCAGGGATAAGGAATTCAAGCGTTCCCAAGAGGC...ACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp CAGAATTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGCCCCCTCTCTTGGTTTaGGCATTCAAGTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: QNSLSTLCCLRTTYGFVKPPLLV*AFKSPV
Trigger: CACTGGAGACTTGAATGCCAAAACCAAGAGAGGGGG...CTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp AAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCAATTCCCTCTCTACTTaGTGTTGCCTGAGAACCACG +
Preference number: 5 (lower is better)
Translates to: KRCIITVSPDTVTKLESCNSLST*CCLRTT
Trigger: CGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAATT...GCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS GCA 90 bp CTGTGTCAAGGACAGGGCTGGTCCATCTACTCCTCCTGTCAGTTCTaGATTTGCCACAATGTAATAATCTTCGGGGATTTCTTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: LCQGQGWSIYSSCQF*ICHNVIIFGDFLFD
Trigger: ATCAAACAAGAAATCCCCGAAGATTATTACATTGTGGCAAATGCAGAACTGACAGGAGGAGTAGATGGACCAGCCCTGTCCTTGACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS-3UTR CAA 90 bp TCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAGGTTACAGTCTAGCTTaGCTTTCACTGGTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: SLSTLCCLRTTYGFVKSVGYSLA*LSLVSQ
Trigger: CTGGGAGACCAGTGAAAGCAAAGCTAGACTGTAACC...TACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp CTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTTTTGCGAGCAATGCTTaGAGGCCTTTGGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: LYFVLPENHVWFCKVCNSFASNA*RPLGLG
Trigger: CCCCAAACCCAAAGGCCTCAAAGCATTGCTCGCAAA...ACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGTTGATGATGACATCATaGCTGCATTCGTCAACCATC +
Preference number: 5 (lower is better)
Translates to: RFAILAGLPGLTTYCACVLMMTS*LHSSTI
Trigger: GATGGTTGACGAATGCAGCAATGATGTCATCATCAA...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATCAGGGGGTCCTCTGTTaGGTGAAGCCAGAGATACCC +
Preference number: 5 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDQGVLC*VKPEIP
Trigger: GGGTATCTCTGGCTTCACCAAACAGAGGACCCCCTG...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTAATTATGGCCACCTGTTGGTaGGTGCCATGTGTACCAGGG +
Preference number: 5 (lower is better)
Translates to: TLCCLRTTYGFVKSVTVIMATCW*VPCVPG
Trigger: CCCTGGTACACATGGCACCAACCAACAGGTGGCCAT...AATTACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATATGGCCACCTGTTGGTaGGTGCCATGTGTACCAGGG +
Preference number: 5 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDMATCW*VPCVPG
Trigger: CCCTGGTACACATGGCACCAACCAACAGGTGGCCAT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGGGGATACTGATCTGTTaGTTAGGATGGGATGTGCTC +
Preference number: 5 (lower is better)
Translates to: VYNHSFSGHSNQTGVLLKGILIC*LGWDVL
Trigger: GAGCACATCCCATCCTAACAAACAGATCAGTATCCC...CTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGACCTTCTTGGCTAAGTTaGGGACAATTCCCCGAAGAG +
Preference number: 5 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRPSWLS*GQFPEE
Trigger: CTCTTCGGGGAATTGTCCCAAACTTAGCCAAGAAGG...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCCCTCGGAGGACGGCTTaGGCCAAACACATGGACAGG +
Preference number: 5 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCPRRTA*AKHMDR
Trigger: CCTGTCCATGTGTTTGGCCAAAGCCGTCCTCCGAGG...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCAGGAATTAGGAATTTaGTGTCCTAGCTCTGCCACT +
Preference number: 5 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIQELGI*CPSSAT
Trigger: AGTGGCAGAGCTAGGACACAAAATTCCTAATTCCTG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCTTACCTGGTGGGGTGCCTAAATCATCGTGTCCCAAGTATTGGTGCCATCCTAATCAAATCAGTTCTATaGACCACCAAGTATCTAGGA +
Preference number: 5 (lower is better)
Translates to: AYLVGCLNHRVPSIGAILIKSVL*TTKYLG
Trigger: TCCTAGATACTTGGTGGTCAATAGAACTGATTTGAT...TAGGATGGCACCAATACTTGGGACACGATGATTTAGGCACCCCACCAGGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp CTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTACAGCGGAGTTCAATTaGCTTCTGCTTCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: LYFVLPENHVWFCKVCNSTAEFN*LLLQGL
Trigger: GAGGCCCTGAAGCAGAAGCAAATTGAACTCCGCTGT...ACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp ACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTAATTTTGGCCAGCTTGTTCTaGCCAAGGGCCTGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: TLCCLRTTYGFVKSVTVILASLF*PRAWQL
Trigger: CAACTGCCAGGCCCTTGGCAAGAACAAGCTGGCCAA...AATTACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp CTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTATGAAATTGCCATTGTaGGAGTGGCCGGCCACTGAC +
Preference number: 5 (lower is better)
Translates to: LYFVLPENHVWFCKVCNSMKLPL*EWPATD
Trigger: GTCAGTGGCCGGCCACTCCAACAATGGCAATTTCAT...ACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CCA 90 bp ATAACGCCACACATTCAAGGCGTACCGCGTGGCTTTGGTAGTATTTaGGCTTACTGCACTGGTACACAGATCATTCAAGTCATCATTAAT +
Preference number: 5 (lower is better)
Translates to: ITPHIQGVPRGFGSI*AYCTGTQIIQVIIN
Trigger: ATTAATGATGACTTGAATGATCTGTGTACCAGTGCAGTAAGCCCAAATACTACCAAAGCCACGCGGTACGCCTTGAATGTGTGGCGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGAAATGCTTTGAGGCCTTaGGGTTTGGGGTTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRNALRP*GLGFKV
Trigger: GACTTTGAACCCCAAACCCAAAGGCCTCAAAGCATT...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp TCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAAATGCTTTGAGGCCTTaGGGTTTGGGGTTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: SLSTLCCLRTTYGFVKSVNALRP*GLGFKV
Trigger: GACTTTGAACCCCAAACCCAAAGGCCTCAAAGCATT...TACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp GAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGTTGATGATGACATCATaGCTGCATTCGTCAACCATC +
Preference number: 5 (lower is better)
Translates to: EAVYNHSFSGHSNQTGVLLMMTS*LHSSTI
Trigger: GATGGTTGACGAATGCAGCAATGATGTCATCATCAA...CAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp CTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTTCTGAGGCTTGGGTTTaGCCATCTGTGTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: LYFVLPENHVWFCKVCNSSEAWV*PSVSRT
Trigger: TGTCCTTGACACAGATGGCAAAACCCAAGCCTCAGA...ACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp CTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTCAGTCTTCTGGACAATaGGTCTGGAGATCACAGAGG +
Preference number: 5 (lower is better)
Translates to: LYFVLPENHVWFCKVCNSQSSGQ*VWRSQR
Trigger: CCTCTGTGATCTCCAGACCAATTGTCCAGAAGACTG...ACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTGTGCTCACAGGCATTaGCATGGCCACCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCCAHRH*HGHLLV
Trigger: AACCAACAGGTGGCCATGCAAATGCCTGTGAGCACA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATGAGCAGCCCAAGTCCTaGTCAGATGACCAAGTGTCG +
Preference number: 5 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDEQPKS*SDDQVS
Trigger: CGACACTTGGTCATCTGACAAGGACTTGGGCTGCTC...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTAACGCAGGGGACTCCTaGGCTTTTCTCACTTGGAAG +
Preference number: 5 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCNAGDS*AFLTWK
Trigger: CTTCCAAGTGAGAAAAGCCAAGGAGTCCCCTGCGTT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTTTTTTAGTTCTGCGTTaGAGCATGGAGAAGCACATG +
Preference number: 5 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIFLVLR*SMEKHM
Trigger: CATGTGCTTCTCCATGCTCAAACGCAGAACTAAAAA...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp TTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTGTTTCAGAAGGATACTaGGAGATGAGGAACTCACGG +
Preference number: 5 (lower is better)
Translates to: FPLYFVLPENHVWFCKVCVSEGY*EMRNSR
Trigger: CCGTGAGTTCCTCATCTCCAAGTATCCTTCTGAAAC...ACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp CTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTATGGTCTTCACCATCTaGGCCAGCTTGTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: LYFVLPENHVWFCKVCNSMVFTI*ASLFLP
Trigger: TGGCAAGAACAAGCTGGCCAAGATGGTGAAGACCAT...ACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp ACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTAATTTTCCTGCCAGGGATGTaGCCCTTCTCACACATGGTC +
Preference number: 5 (lower is better)
Translates to: TLCCLRTTYGFVKSVTVIFLPGM*PFSHMV
Trigger: GACCATGTGTGAGAAGGGCAACATCCCTGGCAGGAA...AATTACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp ACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTAATTGCCTGCTGGCTCAGATaGTTACAGATCAGCACGAGC +
Preference number: 5 (lower is better)
Translates to: TLCCLRTTYGFVKSVTVIACWLR*LQISTS
Trigger: GCTCGTGCTGATCTGTAACAATCTGAGCCAGCAGGC...AATTACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCGAAACAGACCCTCTCTaGGGACCCAGCTCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCETDPL*GPSSAS
Trigger: ACTTGCAGAGCTGGGTCCCAAGAGAGGGTCTGTTTC...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTCTGAGGCTTGGGTTTaGCCATCTGTGTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCSEAWV*PSVSRT
Trigger: TGTCCTTGACACAGATGGCAAAACCCAAGCCTCAGA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTCAGTCTTCTGGACAATaGGTCTGGAGATCACAGAGG +
Preference number: 5 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCQSSGQ*VWRSQR
Trigger: CCTCTGTGATCTCCAGACCAATTGTCCAGAAGACTG...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCCTCTTCAGAGGCAACTaGCTCATCCTGTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCLFRGN*LILSRQ
Trigger: CTGCCTGGACAGGATGAGCAAGTTGCCTCTGAAGAG...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATATGTCTGTGTGGTCTTaGAGCCCGTTGGTCATGCAC +
Preference number: 5 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDMSVWS*SPLVMH
Trigger: GTGCATGACCAACGGGCTCAAAGACCACACAGACAT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTTCAGGTACTGGCTGTaGTACTTGACCACAGTGGAC +
Preference number: 5 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCFRYWL*YLTTVD
Trigger: GTCCACTGTGGTCAAGTACAACAGCCAGTACCTGAA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATTGGTTTTGGGGGTCTTaGAGCAGCTCGATGTCACCA +
Preference number: 5 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDWFWGS*SSSMSP
Trigger: TGGTGACATCGAGCTGCTCAAAGACCCCCAAAACCA...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATATGACCAAGTGTCGCTaGAGGATACTCCCCGACACA +
Preference number: 5 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDMTKCR*RILPDT
Trigger: TGTGTCGGGGAGTATCCTCAAGCGACACTTGGTCAT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCGTATATTTTTCCACTTaGGGAGGCCGAGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ALDLESENLHSPTYKLKFVYFST*GGRGRW
Trigger: CCACCTGCCTCGGCCTCCCAAAGTGGAAAAATATAC...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTAAGATTTATGTGGGATaGAATGAAGAGGAAGTGGGT +
Preference number: 5 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEIKIYVG*NEEEVG
Trigger: ACCCACTTCCTCTTCATTCAATCCCACATAAATCTT...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGATGGGACAGGTTATACTaGGAATCTACCCAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRWDRLY*ESTQKR
Trigger: TCTCTTCTGGGTAGATTCCAAGTATAACCTGTCCCA...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp CGCTTTGCCATTTTAGCAGGCTTACCAGGCTTAACCACATATTGTGCGTGTGTGAAATTGAACAGACTTTaGTTAGTCACAGCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: RFAILAGLPGLTTYCACVKLNRL*LVTAEQ
Trigger: TTGCTCAGCTGTGACTAACAAAAGTCTGTTCAATTT...CACACACGCACAATATGTGGTTAAGCCTGGTAAGCCTGCTAAAATGGCAAAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp GTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGAGTCTTGCTCAAGGTGAGCTTCATGGACTaGTGTGGCTTATTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: VYNHSFSGHSNQTGVLLKVSFMD*CGLFPF
Trigger: AAAAGGAAATAAGCCACACAAGTCCATGAAGCTCAC...CTTGAGCAAGACTCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp ACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTAACAGTAATTTTGAGCCAGACTAGGTaGAGCAAACCCTCGGGGTTA +
Preference number: 5 (lower is better)
Translates to: TLCCLRTTYGFVKSVTVILSQTR*SKPSGL
Trigger: TAACCCCGAGGGTTTGCTCAACCTAGTCTGGCTCAA...AATTACTGTTACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp CAGAATTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGAAAGCTTTTGTGTTGTaGAGCCAGACTAGGTTGAGC +
Preference number: 5 (lower is better)
Translates to: QNSLSTLCCLRTTYGFVKKAFVL*SQTRLS
Trigger: GCTCAACCTAGTCTGGCTCAACAACACAAAAGCTTT...CTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp CAGAATTCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGCCAAAAGCTTTTGTGTaGTTGAGCCAGACTAGGTTG +
Preference number: 5 (lower is better)
Translates to: QNSLSTLCCLRTTYGFVKPKAFV*LSQTRL
Trigger: CAACCTAGTCTGGCTCAACAACACAAAAGCTTTTGG...CTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGAATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCTTTGCGAGCAATGCTTaGAGGCCTTTGGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCFASNA*RPLGLG
Trigger: CCCCAAACCCAAAGGCCTCAAAGCATTGCTCGCAAA...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GAACGAGAAGCGGTGTATAATCACAGTTTCTCCGGACACAGTAACCAAACTGGATCGGGGATTTCTTGTTaGATTTTCTTGATGATGACA +
Preference number: 5 (lower is better)
Translates to: EREAVYNHSFSGHSNQTGSGISC*IFLMMT
Trigger: TGTCATCATCAAGAAAATCAAACAAGAAATCCCCGA...TCCAGTTTGGTTACTGTGTCCGGAGAAACTGTGATTATACACCGCTTCTCGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATTTCTCCTTGAGTTTCTaGGTGGAGGAGCTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDFSLSF*VEELKV
Trigger: CACCTTCAGCTCCTCCACCAAGAAACTCAAGGAGAA...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCAAAGTAGGGCTGGTTTaGGGGGTCTTTGAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCKVGLV*GVFEQL
Trigger: GAGCTGCTCAAAGACCCCCAAAACCAGCCCTACTTT...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATCCTTCTTGGCTAAGTTaGGGACAATTCCCCGAAGAG +
Preference number: 5 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDPSWLS*GQFPEE
Trigger: CTCTTCGGGGAATTGTCCCAAACTTAGCCAAGAAGG...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGATCACAGTTTTCCAGCTaGACCTTCTTGGCTAAGTTT +
Preference number: 5 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRSQFSS*TFLAKF
Trigger: AAACTTAGCCAAGAAGGTCAAGCTGGAAAACTGTGA...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTAGTTCACTAGAAGCCTaGTTCTCACAGACACCCTTC +
Preference number: 5 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCSSLEA*FSQTPF
Trigger: GAAGGGTGTCTGTGAGAACAAGGCTTCTAGTGAACT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCCAGAGCTTGGCTGTGTaGGAGGTAGAATTCATGGGC +
Preference number: 5 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCQSLAV*EVEFMG
Trigger: GCCCATGAATTCTACCTCCAACACAGCCAAGCTCTG...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GGTAAACTTTGCCTGAAGCGTGGACAGCCTTCCTCAAAGAAGTCTTGGGAAATTCTGTTCTTCCTTCACTaGTTTTTGCTTATATCTGAG +
Preference number: 5 (lower is better)
Translates to: GKLCLKRGQPSSKKSWEILFFLH*FLLISE
Trigger: CTCAGATATAAGCAAAAACAAGTGAAGGAAGAACAG...AATTTCCCAAGACTTCTTTGAGGAAGGCTGTCCACGCTTCAGGCAAAGTTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCGCCCAGCTGACCAATTaGGACAGATTCTCAGATGAG +
Preference number: 5 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCAQLTN*DRFSDE
Trigger: CTCATCTGAGAATCTGTCCAAATTGGTCAGCTGGGC...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCGGGATACTGATCTGTTaGTTAGGATGGGATGTGCTC +
Preference number: 5 (lower is better)
Translates to: ALDLESENLHSPTYKLKFGILIC*LGWDVL
Trigger: GAGCACATCCCATCCTAACAAACAGATCAGTATCCC...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATGGGATACTGATCTGTTaGTTAGGATGGGATGTGCTC +
Preference number: 5 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDGILIC*LGWDVL
Trigger: GAGCACATCCCATCCTAACAAACAGATCAGTATCCC...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCTTCTCCTTGAGTTTCTaGGTGGAGGAGCTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCFSLSF*VEELKV
Trigger: CACCTTCAGCTCCTCCACCAAGAAACTCAAGGAGAA...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCTACTGGCTGTTGTACTaGACCACAGTGGACAGGAGA +
Preference number: 5 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCYWLLY*TTVDRR
Trigger: TCTCCTGTCCACTGTGGTCAAGTACAACAGCCAGTA...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTCCAGCTTGACCTTCTaGGCTAAGTTTGGGACAATT +
Preference number: 5 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCSSLTF*AKFGTI
Trigger: AATTGTCCCAAACTTAGCCAAGAAGGTCAAGCTGGA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTGGGGATCTGTGTTTTTaGCAGCTTGTTTGGTTAGCT +
Preference number: 5 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCGDLCF*QLVWLA
Trigger: AGCTAACCAAACAAGCTGCAAAAAACACAGATCCCC...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATATTAGGCTGCAGGCTTaGCCCAATAGTTCACATAGG +
Preference number: 5 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDIRLQA*PNSSHR
Trigger: CCTATGTGAACTATTGGGCAAAGCCTGCAGCCTAAT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp TCCCTCTCTACTTTGTGTTGCCTGAGAACCACGTATGGTTTTGTAAAGTCTGTACTGTCAGTTCTGCATTaGCCACAATGTAATAATCTT +
Preference number: 5 (lower is better)
Translates to: SLSTLCCLRTTYGFVKSVLSVLH*PQCNNL
Trigger: AAGATTATTACATTGTGGCAAATGCAGAACTGACAG...TACAGACTTTACAAAACCATACGTGGTTCTCAGGCAACACAAAGTAGAGAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTCACAGTTTTCCAGCTaGACCTTCTTGGCTAAGTTT +
Preference number: 5 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCSQFSS*TFLAKF
Trigger: AAACTTAGCCAAGAAGGTCAAGCTGGAAAACTGTGA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCAGTTCACTAGAAGCCTaGTTCTCACAGACACCCTTC +
Preference number: 5 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCSSLEA*FSQTPF
Trigger: GAAGGGTGTCTGTGAGAACAAGGCTTCTAGTGAACT...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTAGGCTTAACCACATATaGTGCGTGTGTGTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCRLNHI*CVCVCK
Trigger: TTTACACACACACACGCACAATATGTGGTTAAGCCT...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp CCAGGCTTTCCAGGATCGATTAAGTTCCCAAGTGAGCAATCATTTAGTAAGAGACTTTGGGAAGATGTTTaGCTCTGTTTCAGAATGAAA +
Preference number: 5 (lower is better)
Translates to: PGFPGSIKFPSEQSFSKRLWEDV*LCFRMK
Trigger: TTTCATTCTGAAACAGAGCAAAACATCTTCCCAAAG...TCTCTTACTAAATGATTGCTCACTTGGGAACTTAATCGATCCTGGAAAGCCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCATAAAATTCTCTCCATaGACAGCCGAGATGGGGTTC +
Preference number: 5 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCIKFSP*TAEMGF
Trigger: GAACCCCATCTCGGCTGTCAATGGAGAGAATTTTAT...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTGGAGGTTTTCACATTTaGATCACAGATTGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCGGFHI*ITDWLF
Trigger: GAAAAGCCAATCTGTGATCAAAATGTGAAAACCTCC...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATAGGCTTAACCACATATaGTGCGTGTGTGTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDRLNHI*CVCVCK
Trigger: TTTACACACACACACGCACAATATGTGGTTAAGCCT...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTTATGAACTTGAGGAATaGCAGAAGTGTAACACGGTT +
Preference number: 5 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCYELEE*QKCNTV
Trigger: AACCGTGTTACACTTCTGCAATTCCTCAAGTTCATA...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCCAGGAATTAGGAATTTaGTGTCCTAGCTCTGCCACT +
Preference number: 5 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCQELGI*CPSSAT
Trigger: AGTGGCAGAGCTAGGACACAAAATTCCTAATTCCTG...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GTTGGAGGTAGAATTCATGGGCGAAAATGTGTTAACTTGACCAGATTATCATGTCACTGTTTGCATTCATaGATGCTTAAAGGTAACGTC +
Preference number: 5 (lower is better)
Translates to: VGGRIHGRKCVNLTRLSCHCLHS*MLKGNV
Trigger: GACGTTACCTTTAAGCATCAATGAATGCAAACAGTG...ACATGATAATCTGGTCAAGTTAACACATTTTCGCCCATGAATTCTACCTCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATGTGACACAGTATGGCTaGAGAGATGAAATATTTGCC +
Preference number: 5 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDVTQYG*RDEIFA
Trigger: GGCAAATATTTCATCTCTCAAGCCATACTGTGTCAC...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCTCTACCCAGAAGAGATaGTCTCCATCTCTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCSTQKR*SPSLWE
Trigger: TTCCCAAAGAGATGGAGACAATCTCTTCTGGGTAGA...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCCCAGGTCCTTACAAATaGTTAACAGACTACTGGACT +
Preference number: 5 (lower is better)
Translates to: ALDLESENLHSPTYKLKFPGPYK*LTDYWT
Trigger: AGTCCAGTAGTCTGTTAACAATTTGTAAGGACCTGG...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCCCTTCTGTCACAGCTTaGGTTAGGTACTTCCATAAA +
Preference number: 5 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCPSVTA*VRYFHK
Trigger: TTTATGGAAGTACCTAACCAAAGCTGTGACAGAAGG...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATTATGAACTTGAGGAATaGCAGAAGTGTAACACGGTT +
Preference number: 5 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDYELEE*QKCNTV
Trigger: AACCGTGTTACACTTCTGCAATTCCTCAAGTTCATA...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCATCAAGCCTCGTAGGTaGCTGTACAACTTATTATCT +
Preference number: 5 (lower is better)
Translates to: ALDLESENLHSPTYKLKFIKPRR*LYNLLS
Trigger: AGATAATAAGTTGTACAGCAACCTACGAGGCTTGAT...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCTCGGGGATTTCTTGTTaGATTTTCTTGATGATGACA +
Preference number: 5 (lower is better)
Translates to: ALDLESENLHSPTYKLKFSGISC*IFLMMT
Trigger: TGTCATCATCAAGAAAATCAAACAAGAAATCCCCGA...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp TTTCAAGTACAGCAAGATGCTTCCGTTTCTACAAGAGTATTACTTTGTCCAGATTCGGGGATTTCTTGTTaGATTTTCTTGATGATGACA +
Preference number: 5 (lower is better)
Translates to: FQVQQDASVSTRVLLCPDSGISC*IFLMMT
Trigger: TGTCATCATCAAGAAAATCAAACAAGAAATCCCCGA...ATCTGGACAAAGTAATACTCTTGTAGAAACGGAAGCATCTTGCTGTACTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCCTTAATGAGCACTCTTaGAGCTCCTTTTTCACTTGT +
Preference number: 5 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCLNEHS*SSFFTC
Trigger: ACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAG...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS-3UTR CAA 90 bp GCACTAGATTTGGAGTCAGAAAACCTGCATTCTCCAACTTACAAACTTAAATTCATCAAATCAGTTCTATaGACCACCAAGTATCTAGGA +
Preference number: 5 (lower is better)
Translates to: ALDLESENLHSPTYKLKFIKSVL*TTKYLG
Trigger: TCCTAGATACTTGGTGGTCAATAGAACTGATTTGAT...GAATTTAAGTTTGTAAGTTGGAGAATGCAGGTTTTCTGACTCCAAATCTAGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp ATTCATATGAGGACTTCGGGTGCTTTTAGATATGTAGCTTCTAGCCATATTATCACTGCATTCATTCCCTaGATGTCTGAATTTAAATGG +
Preference number: 5 (lower is better)
Translates to: IHMRTSGAFRYVASSHIITAFIP*MSEFKW
Trigger: CCATTTAAATTCAGACATCAAGGGAATGAATGCAGT...GATAATATGGCTAGAAGCTACATATCTAAAAGCACCCGAAGTCCTCATATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS-3UTR CAA 90 bp ATTATTGTTACTCTTAATGAGCACTCTTTGAGCTCCTTTTTCACTTGTTGTTGCCTGTCAGTTCTGCATTaGCCACAATGTAATAATCTT +
Preference number: 5 (lower is better)
Translates to: IIVTLNEHSLSSFFTCCCLSVLH*PQCNNL
Trigger: AAGATTATTACATTGTGGCAAATGCAGAACTGACAG...GCAACAACAAGTGAAAAAGGAGCTCAAAGAGTGCTCATTAAGAGTAACAATAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CCA 72 bp AGGAGAGCGGCCAGAGGGCCGGGCACCAAAGGTAAGTaGAGCGGGGAAGGCGCCCGGCGGGCGGCGGACCGA +
Preference number: 6 (lower is better)
Translates to: RRAARGPGTKGK*SGEGARRAADR
Trigger: TCGGTCCGCCGCCCGCCGGGCGCCTTCCCCGCTCCACTTACCTTTGGTGCCCGGCCCTCTGGCCGCTCTCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337530.11
CDS CCA 72 bp TTCTTCAGGATGCGGTCCAGGCCTCGGCGAATAGCATaGAGCGAGGTGGCCAGGAAGTCCGAGCCGTCGCTC +
Preference number: 6 (lower is better)
Translates to: FFRMRSRPRRIA*SEVARKSEPSL
Trigger: GAGCGACGGCTCGGACTTCCTGGCCACCTCGCTCCATGCTATTCGCCGAGGCCTGGACCGCATCCTGAAGAA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS TCA 72 bp GACACACTCTGGTGGAGCCGCTCCGACTCTCCCGCTTaGCGCTGTCCGTCCGGGCAAAGTAGGGCTGGTTTT +
Preference number: 6 (lower is better)
Translates to: DTLWWSRSDSPA*RCPSGQSRAGF
Trigger: AAAACCAGCCCTACTTTGCCCGGACGGACAGCGTCAAGCGGGAGAGTCGGAGCGGCTCCACCAGAGTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS GCA 72 bp GGGACAATTCCCCGAAGAGAGCGCAGCCCCATCCTCTaGTCCTCATACCACACGCTGCCCATGTCTGTGGCC +
Preference number: 6 (lower is better)
Translates to: GTIPRRERSPIL*SSYHTLPMSVA
Trigger: GGCCACAGACATGGGCAGCGTGTGGTATGAGGAGCAGAGGATGGGGCTGCGCTCTCTTCGGGGAATTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CCA 72 bp CTGTGCTGTGGCCTCAGTGGTTATGGCTGGAGCGACTaGGGGCTGCTGCTGACTGGAGCTCACTTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: LCCGLSGYGWSD*GLLLTGAHFWL
Trigger: GAGCCAGAAGTGAGCTCCAGTCAGCAGCAGCCCCCAGTCGCTCCAGCCATAACCACTGAGGCCACAGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 72 bp TGGTATGCACTGTGCTGTGGCCTCAGTGGTTATGGCTaGAGCGACTGGGGGCTGCTGCTGACTGGAGCTCAC +
Preference number: 6 (lower is better)
Translates to: WYALCCGLSGYG*SDWGLLLTGAH
Trigger: GTGAGCTCCAGTCAGCAGCAGCCCCCAGTCGCTCCAGCCATAACCACTGAGGCCACAGCACAGTGCATACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 72 bp CATCCTGGTCTGGTATGCACTGTGCTGTGGCCTCAGTaGTTATGGCTGGAGCGACTGGGGGCTGCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: HPGLVCTVLWPQ*LWLERLGAAAD
Trigger: GTCAGCAGCAGCCCCCAGTCGCTCCAGCCATAACCACTGAGGCCACAGCACAGTGCATACCAGACCAGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374244.3
ENST00000536272.5
CDS GCA 72 bp AGCGCGGTCTGCGTGCTCCGGATGGTTTTCTCGTTCTaGTCCCTGCTGAGCTCAGCTGCTCTTTCATCCTGG +
Preference number: 6 (lower is better)
Translates to: SAVCVLRMVFSF*SLLSSAALSSW
Trigger: CCAGGATGAAAGAGCAGCTGAGCTCAGCAGGGAGCAGAACGAGAAAACCATCCGGAGCACGCAGACCGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374244.3
ENST00000536272.5
CDS GCA 72 bp CCATTGTTGGAGTGGCCGGCCACTGACTGGGCAGCCTaGTGGCTCAGATTGTTACAGATCAGCACGAGCTGG +
Preference number: 6 (lower is better)
Translates to: PLLEWPATDWAA*WLRLLQISTSW
Trigger: CCAGCTCGTGCTGATCTGTAACAATCTGAGCCAGCAGGCTGCCCAGTCAGTGGCCGGCCACTCCAACAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CCA 72 bp GGCATACTCCTTATAGTCCTGGACAGGGCAGGTCTGTaGGGCGTGCTGGGTGGCATACACACGGGAGTCTGT +
Preference number: 6 (lower is better)
Translates to: GILLIVLDRAGL*GVLGGIHTGVC
Trigger: ACAGACTCCCGTGTGTATGCCACCCAGCACGCCCCACAGACCTGCCCTGTCCAGGACTATAAGGAGTATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CAA 90 bp CGCGCGCCCGACATGCCTGCCTTACTCAGCACCCACAGCTTCTCCTaGAGTTTCTTGGTGGAGGAGCTGAAGGTGCTGCTGGTGATGGAA +
Preference number: 6 (lower is better)
Translates to: RAPDMPALLSTHSFS*SFLVEELKVLLVME
Trigger: TTCCATCACCAGCAGCACCTTCAGCTCCTCCACCAAGAAACTCAAGGAGAAGCTGTGGGTGCTGAGTAAGGCAGGCATGTCGGGCGCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CAA 90 bp TTGTTGGAGTGGCCGGCCACTGACTGGGCAGCCTGCTGGCTCAGATaGTTACAGATCAGCACGAGCTGGTTGCTCTGGGCCTCAGACAAG +
Preference number: 6 (lower is better)
Translates to: LLEWPATDWAACWLR*LQISTSWLLWASDK
Trigger: CTTGTCTGAGGCCCAGAGCAACCAGCTCGTGCTGATCTGTAACAATCTGAGCCAGCAGGCTGCCCAGTCAGTGGCCGGCCACTCCAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CAA 90 bp CAGACCCTACACAGGAGGGACCAGCGTGAGTCTGAGGCTTGGGTTTaGCCATCTGTGTCAAGGACAGGGCTGGTCCATCTACTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: QTLHRRDQRESEAWV*PSVSRTGLVHLLLL
Trigger: CAGGAGGAGTAGATGGACCAGCCCTGTCCTTGACACAGATGGCAAAACCCAAGCCTCAGACTCACGCTGGTCCCTCCTGTGTAGGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CAA 90 bp ACTCTCCCGCTTGACGCTGTCCGTCCGGGCAAAGTAGGGCTGGTTTaGGGGGTCTTTGAGCAGCTCGATGTCACCATACATCAGATCCGC +
Preference number: 6 (lower is better)
Translates to: TLPLDAVRPGKVGLV*GVFEQLDVTIHQIR
Trigger: GCGGATCTGATGTATGGTGACATCGAGCTGCTCAAAGACCCCCAAAACCAGCCCTACTTTGCCCGGACGGACAGCGTCAAGCGGGAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS GCA 72 bp CTGGGCAGATGGGACAGGAACTCTTCAGAGGCAACTTaGTCATCCTGTCCAGGCAGCTGCAGGGCAGACAAG +
Preference number: 6 (lower is better)
Translates to: LGRWDRNSSEAT*SSCPGSCRADK
Trigger: CTTGTCTGCCCTGCAGCTGCCTGGACAGGATGAGCAAGTTGCCTCTGAAGAGTTCCTGTCCCATCTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS GCA 72 bp GAGATGAGGAACTCACGGAAATTGCGGAGCGCGGTCTaGGTGCTCCGGATGGTTTTCTCGTTCTGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: EMRNSRKLRSAV*VLRMVFSFCSL
Trigger: CAGGGAGCAGAACGAGAAAACCATCCGGAGCACGCAGACCGCGCTCCGCAATTTCCGTGAGTTCCTCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CCA 72 bp ACCCTACACAGGAGGGACCAGCGTGAGTCTGAGGCTTaGGTTTTGCCATCTGTGTCAAGGACAGGGCTGGTC +
Preference number: 6 (lower is better)
Translates to: TLHRRDQRESEA*VLPSVSRTGLV
Trigger: GACCAGCCCTGTCCTTGACACAGATGGCAAAACCCAAGCCTCAGACTCACGCTGGTCCCTCCTGTGTAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 72 bp TTGTTGGAGTGGCCGGCCACTGACTGGGCAGCCTGCTaGCTCAGATTGTTACAGATCAGCACGAGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: LLEWPATDWAAC*LRLLQISTSWL
Trigger: CAACCAGCTCGTGCTGATCTGTAACAATCTGAGCCAGCAGGCTGCCCAGTCAGTGGCCGGCCACTCCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CAA 72 bp ATCTTGGCCAGCTTGTTCTTGCCAAGGGCCTGGCAGTaGTACCAATGCAGAGCCGCCAGGTTCACGACTGGC +
Preference number: 6 (lower is better)
Translates to: ILASLFLPRAWQ*YQCRAARFTTG
Trigger: GCCAGTCGTGAACCTGGCGGCTCTGCATTGGTACAACTGCCAGGCCCTTGGCAAGAACAAGCTGGCCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CAA 90 bp GCATGCTCCTGCAGCGTCCGCATGTTCAGGTACTGGCTGTTGTACTaGACCACAGTGGACAGGAGAGTGATAGGGCTGTCATCCCCCAGA +
Preference number: 6 (lower is better)
Translates to: ACSCSVRMFRYWLLY*TTVDRRVIGLSSPR
Trigger: TCTGGGGGATGACAGCCCTATCACTCTCCTGTCCACTGTGGTCAAGTACAACAGCCAGTACCTGAACATGCGGACGCTGCAGGAGCATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CAA 90 bp GGGATGTTGCCCTTCTCACACATGGTCTTCACCATCTTGGCCAGCTaGTTCTTGCCAAGGGCCTGGCAGTTGTACCAATGCAGAGCCGCC +
Preference number: 6 (lower is better)
Translates to: GMLPFSHMVFTILAS*FLPRAWQLYQCRAA
Trigger: GGCGGCTCTGCATTGGTACAACTGCCAGGCCCTTGGCAAGAACAAGCTGGCCAAGATGGTGAAGACCATGTGTGAGAAGGGCAACATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS GCA 72 bp ACAGGAGGGACCAGCGTGAGTCTGAGGCTTGGGTTTTaGCATCTGTGTCAAGGACAGGGCTGGTCCATCTAC +
Preference number: 6 (lower is better)
Translates to: TGGTSVSLRLGF*HLCQGQGWSIY
Trigger: GTAGATGGACCAGCCCTGTCCTTGACACAGATGGCAAAACCCAAGCCTCAGACTCACGCTGGTCCCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS GCA 72 bp GTAGACGATGTTGCGAGAACGCGCGCCCGACATGCCTaGCTTACTCAGCACCCACAGCTTCTCCTTGAGTTT +
Preference number: 6 (lower is better)
Translates to: VDDVARTRARHA*LTQHPQLLLEF
Trigger: AAACTCAAGGAGAAGCTGTGGGTGCTGAGTAAGGCAGGCATGTCGGGCGCGCGTTCTCGCAACATCGTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS GCA 72 bp TCTCCTCCTCGTCAGAAAGGGAGAAGTAGACGATGTTaGGAGAACGCGCGCCCGACATGCCTGCCTTACTCA +
Preference number: 6 (lower is better)
Translates to: SPPRQKGRSRRC*ENARPTCLPYS
Trigger: TGAGTAAGGCAGGCATGTCGGGCGCGCGTTCTCGCAACATCGTCTACTTCTCCCTTTCTGACGAGGAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CCA 72 bp TCCGCATGCTCCTGCAGCGTCCGCATGTTCAGGTACTaGCTGTTGTACTTGACCACAGTGGACAGGAGAGTG +
Preference number: 6 (lower is better)
Translates to: SACSCSVRMFRY*LLYLTTVDRRV
Trigger: CACTCTCCTGTCCACTGTGGTCAAGTACAACAGCCAGTACCTGAACATGCGGACGCTGCAGGAGCATGCGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CCA 72 bp TTCACCATCTTGGCCAGCTTGTTCTTGCCAAGGGCCTaGCAGTTGTACCAATGCAGAGCCGCCAGGTTCACG +
Preference number: 6 (lower is better)
Translates to: FTILASLFLPRA*QLYQCRAARFT
Trigger: CGTGAACCTGGCGGCTCTGCATTGGTACAACTGCCAGGCCCTTGGCAAGAACAAGCTGGCCAAGATGGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CAA 72 bp CACAGGAGGGACCAGCGTGAGTCTGAGGCTTGGGTTTaGCCATCTGTGTCAAGGACAGGGCTGGTCCATCTA +
Preference number: 6 (lower is better)
Translates to: HRRDQRESEAWV*PSVSRTGLVHL
Trigger: TAGATGGACCAGCCCTGTCCTTGACACAGATGGCAAAACCCAAGCCTCAGACTCACGCTGGTCCCTCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CAA 90 bp AGATCCGCATGCTCCTGCAGCGTCCGCATGTTCAGGTACTGGCTGTaGTACTTGACCACAGTGGACAGGAGAGTGATAGGGCTGTCATCC +
Preference number: 6 (lower is better)
Translates to: RSACSCSVRMFRYWL*YLTTVDRRVIGLSS
Trigger: GGATGACAGCCCTATCACTCTCCTGTCCACTGTGGTCAAGTACAACAGCCAGTACCTGAACATGCGGACGCTGCAGGAGCATGCGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CAA 90 bp GTCTTCACCATCTTGGCCAGCTTGTTCTTGCCAAGGGCCTGGCAGTaGTACCAATGCAGAGCCGCCAGGTTCACGACTGGCTTGATGGAT +
Preference number: 6 (lower is better)
Translates to: VFTILASLFLPRAWQ*YQCRAARFTTGLMD
Trigger: ATCCATCAAGCCAGTCGTGAACCTGGCGGCTCTGCATTGGTACAACTGCCAGGCCCTTGGCAAGAACAAGCTGGCCAAGATGGTGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CAA 90 bp TTGCCCTTCTCACACATGGTCTTCACCATCTTGGCCAGCTTGTTCTaGCCAAGGGCCTGGCAGTTGTACCAATGCAGAGCCGCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: LPFSHMVFTILASLF*PRAWQLYQCRAARF
Trigger: GAACCTGGCGGCTCTGCATTGGTACAACTGCCAGGCCCTTGGCAAGAACAAGCTGGCCAAGATGGTGAAGACCATGTGTGAGAAGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS TCA 72 bp CTGCTGACTGGAGCTCACTTCTGGCTCTGTGTTAACTaGGGGAGAAAGGGCTACCTCACAGGAGGAGACCTG +
Preference number: 6 (lower is better)
Translates to: LLTGAHFWLCVN*GRKGYLTGGDL
Trigger: CAGGTCTCCTCCTGTGAGGTAGCCCTTTCTCCCTCAGTTAACACAGAGCCAGAAGTGAGCTCCAGTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS TCA 72 bp TGGCAGCAGCTGTGGGAGCCAAGCCTCCGGGAGACCTaGGTGAACGAGACAAAGGTGAAGTTCTCACAGTTT +
Preference number: 6 (lower is better)
Translates to: WQQLWEPSLRET*VNETKVKFSQF
Trigger: AAACTGTGAGAACTTCACCTTTGTCTCGTTCACTCAGGTCTCCCGGAGGCTTGGCTCCCACAGCTGCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS TCA 72 bp CGGTGTCTGAGGAAGAGTCATAGGAGGCGGAGACGATaGAATTGCCATTGTTGGAGTGGCCGGCCACTGACT +
Preference number: 6 (lower is better)
Translates to: RCLRKSHRRRRR*NCHCWSGRPLT
Trigger: AGTCAGTGGCCGGCCACTCCAACAATGGCAATTTCATCGTCTCCGCCTCCTATGACTCTTCCTCAGACACCG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS GCA 72 bp TTGAGCAGCTCGATGTCACCATACATCAGATCCGCATaGTCCTGCAGCGTCCGCATGTTCAGGTACTGGCTG +
Preference number: 6 (lower is better)
Translates to: LSSSMSPYIRSA*SCSVRMFRYWL
Trigger: CAGCCAGTACCTGAACATGCGGACGCTGCAGGAGCATGCGGATCTGATGTATGGTGACATCGAGCTGCTCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CAA 72 bp TGCTCCTGCAGCGTCCGCATGTTCAGGTACTGGCTGTaGTACTTGACCACAGTGGACAGGAGAGTGATAGGG +
Preference number: 6 (lower is better)
Translates to: CSCSVRMFRYWL*YLTTVDRRVIG
Trigger: CCCTATCACTCTCCTGTCCACTGTGGTCAAGTACAACAGCCAGTACCTGAACATGCGGACGCTGCAGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CAA 72 bp CTTGACGCTGTCCGTCCGGGCAAAGTAGGGCTGGTTTaGGGGGTCTTTGAGCAGCTCGATGTCACCATACAT +
Preference number: 6 (lower is better)
Translates to: LDAVRPGKVGLV*GVFEQLDVTIH
Trigger: ATGTATGGTGACATCGAGCTGCTCAAAGACCCCCAAAACCAGCCCTACTTTGCCCGGACGGACAGCGTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CAA 90 bp TTAGGATGGGATGTGCTCACAGGCATTTGCATGGCCACCTGTTGGTaGGTGCCATGTGTACCAGGGGGTCCTCTGTTTGGTGAAGCCAGA +
Preference number: 6 (lower is better)
Translates to: LGWDVLTGICMATCW*VPCVPGGPLFGEAR
Trigger: TCTGGCTTCACCAAACAGAGGACCCCCTGGTACACATGGCACCAACCAACAGGTGGCCATGCAAATGCCTGTGAGCACATCCCATCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CAA 90 bp GGGGATACTGATCTGTTTGTTAGGATGGGATGTGCTCACAGGCATTaGCATGGCCACCTGTTGGTTGGTGCCATGTGTACCAGGGGGTCC +
Preference number: 6 (lower is better)
Translates to: GDTDLFVRMGCAHRH*HGHLLVGAMCTRGS
Trigger: GGACCCCCTGGTACACATGGCACCAACCAACAGGTGGCCATGCAAATGCCTGTGAGCACATCCCATCCTAACAAACAGATCAGTATCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CAA 90 bp TCCTGTCCAGGCAGCTGCAGGGCAGACAAGGGGATACTGATCTGTTaGTTAGGATGGGATGTGCTCACAGGCATTTGCATGGCCACCTGT +
Preference number: 6 (lower is better)
Translates to: SCPGSCRADKGILIC*LGWDVLTGICMATC
Trigger: ACAGGTGGCCATGCAAATGCCTGTGAGCACATCCCATCCTAACAAACAGATCAGTATCCCCTTGTCTGCCCTGCAGCTGCCTGGACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS TCA 72 bp TGTACCAATGCAGAGCCGCCAGGTTCACGACTGGCTTaGTGGATAAGTAGAAAGGGGCATCCTCGTAGCGCA +
Preference number: 6 (lower is better)
Translates to: CTNAEPPGSRLA*WISRKGHPRSA
Trigger: TGCGCTACGAGGATGCCCCTTTCTACTTATCCATCAAGCCAGTCGTGAACCTGGCGGCTCTGCATTGGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS GCA 72 bp AGCTCGATGTCACCATACATCAGATCCGCATGCTCCTaGAGCGTCCGCATGTTCAGGTACTGGCTGTTGTAC +
Preference number: 6 (lower is better)
Translates to: SSMSPYIRSACS*SVRMFRYWLLY
Trigger: GTACAACAGCCAGTACCTGAACATGCGGACGCTGCAGGAGCATGCGGATCTGATGTATGGTGACATCGAGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CCA 72 bp CTGCATTCGTCAACCATCTGCGTCTGGGAGCTTGAATaGAGGGAAGATGGGACTACCCCAGGTCTTTTGCGA +
Preference number: 6 (lower is better)
Translates to: LHSSTICVWELE*REDGTTPGLLR
Trigger: TCGCAAAAGACCTGGGGTAGTCCCATCTTCCCTCCATTCAAGCTCCCAGACGCAGATGGTTGACGAATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 72 bp TGTGGGTCTAGCTCCGTGCTGATGGCAGATGTGACATaGGGAATCAGTTTAGCAGACCCTACACAGGAGGGA +
Preference number: 6 (lower is better)
Translates to: CGSSSVLMADVT*GISLADPTQEG
Trigger: TCCCTCCTGTGTAGGGTCTGCTAAACTGATTCCCCATGTCACATCTGCCATCAGCACGGAGCTAGACCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 72 bp ACCTTTCGAGCCCACACTGGTAATTGGCCAAGCTGTTaGGTTCGTATTCGGACCCATCCTTCTGCCTGGCAT +
Preference number: 6 (lower is better)
Translates to: TFRAHTGNWPSC*VRIRTHPSAWH
Trigger: ATGCCAGGCAGAAGGATGGGTCCGAATACGAACCCAACAGCTTGGCCAATTACCAGTGTGGGCTCGAAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CAA 72 bp TGCAGCGTCCGCATGTTCAGGTACTGGCTGTTGTACTaGACCACAGTGGACAGGAGAGTGATAGGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: CSVRMFRYWLLY*TTVDRRVIGLS
Trigger: TGACAGCCCTATCACTCTCCTGTCCACTGTGGTCAAGTACAACAGCCAGTACCTGAACATGCGGACGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CAA 72 bp TCAGAAGGATACTTGGAGATGAGGAACTCACGGAAATaGCGGAGCGCGGTCTGCGTGCTCCGGATGGTTTTC +
Preference number: 6 (lower is better)
Translates to: SEGYLEMRNSRK*RSAVCVLRMVF
Trigger: GAAAACCATCCGGAGCACGCAGACCGCGCTCCGCAATTTCCGTGAGTTCCTCATCTCCAAGTATCCTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS TCA 72 bp GTTGGTGCCATGTGTACCAGGGGGTCCTCTGTTTGGTaGAGCCAGAGATACCCTAGCAGTCTTCTGGACAAT +
Preference number: 6 (lower is better)
Translates to: VGAMCTRGSSVW*SQRYPSSLLDN
Trigger: ATTGTCCAGAAGACTGCTAGGGTATCTCTGGCTTCACCAAACAGAGGACCCCCTGGTACACATGGCACCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS TCA 72 bp TGGAGTCTTGCTCAAGCCACCTGGTCAAGCGGTGTCTaGGGAAGAGTCATAGGAGGCGGAGACGATGAAATT +
Preference number: 6 (lower is better)
Translates to: WSLAQATWSSGV*GRVIGGGDDEI
Trigger: AATTTCATCGTCTCCGCCTCCTATGACTCTTCCTCAGACACCGCTTGACCAGGTGGCTTGAGCAAGACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CCA 72 bp AGGCTTGGGTTTTGCCATCTGTGTCAAGGACAGGGCTaGTCCATCTACTCCTCCTGTCAGTTCTGCATTTGC +
Preference number: 6 (lower is better)
Translates to: RLGFCHLCQGQG*SIYSSCQFCIC
Trigger: GCAAATGCAGAACTGACAGGAGGAGTAGATGGACCAGCCCTGTCCTTGACACAGATGGCAAAACCCAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CAA 72 bp CATTGCTGCATTCGTCAACCATCTGCGTCTGGGAGCTaGAATGGAGGGAAGATGGGACTACCCCAGGTCTTT +
Preference number: 6 (lower is better)
Translates to: HCCIRQPSASGS*NGGKMGLPQVF
Trigger: AAAGACCTGGGGTAGTCCCATCTTCCCTCCATTCAAGCTCCCAGACGCAGATGGTTGACGAATGCAGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CAA 72 bp GGCAGCTGCAGGGCAGACAAGGGGATACTGATCTGTTaGTTAGGATGGGATGTGCTCACAGGCATTTGCATG +
Preference number: 6 (lower is better)
Translates to: GSCRADKGILIC*LGWDVLTGICM
Trigger: CATGCAAATGCCTGTGAGCACATCCCATCCTAACAAACAGATCAGTATCCCCTTGTCTGCCCTGCAGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CAA 72 bp CCATGGAAGCCTGTGCAATGCCCAAAAGCTTTTGTGTaGTTGAGCCAGACTAGGTTGAGCAAACCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: PWKPVQCPKAFV*LSQTRLSKPSG
Trigger: CCCCGAGGGTTTGCTCAACCTAGTCTGGCTCAACAACACAAAAGCTTTTGGGCATTGCACAGGCTTCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CAA 90 bp TCTCTTGTTTCAGAAGGATACTTGGAGATGAGGAACTCACGGAAATaGCGGAGCGCGGTCTGCGTGCTCCGGATGGTTTTCTCGTTCTGC +
Preference number: 6 (lower is better)
Translates to: SLVSEGYLEMRNSRK*RSAVCVLRMVFSFC
Trigger: GCAGAACGAGAAAACCATCCGGAGCACGCAGACCGCGCTCCGCAATTTCCGTGAGTTCCTCATCTCCAAGTATCCTTCTGAAACAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CCA 72 bp ATGACATCATTGCTGCATTCGTCAACCATCTGCGTCTaGGAGCTTGAATGGAGGGAAGATGGGACTACCCCA +
Preference number: 6 (lower is better)
Translates to: MTSLLHSSTICV*ELEWREDGTTP
Trigger: TGGGGTAGTCCCATCTTCCCTCCATTCAAGCTCCCAGACGCAGATGGTTGACGAATGCAGCAATGATGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 72 bp AGCTGTTGGGTTCGTATTCGGACCCATCCTTCTGCCTaGCATCAACAAAGAAAGAGGCAAGGTAGGCATCCA +
Preference number: 6 (lower is better)
Translates to: SCWVRIRTHPSA*HQQRKRQGRHP
Trigger: TGGATGCCTACCTTGCCTCTTTCTTTGTTGATGCCAGGCAGAAGGATGGGTCCGAATACGAACCCAACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CCA 72 bp GTTCTTTCAGGTACCTTTCGAGCCCACACTGGTAATTaGCCAAGCTGTTGGGTTCGTATTCGGACCCATCCT +
Preference number: 6 (lower is better)
Translates to: VLSGTFRAHTGN*PSCWVRIRTHP
Trigger: AGGATGGGTCCGAATACGAACCCAACAGCTTGGCCAATTACCAGTGTGGGCTCGAAAGGTACCTGAAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CCA 72 bp TGGTTTTCCTGCCAGGGATGTTGCCCTTCTCACACATaGTCTTCACCATCTTGGCCAGCTTGTTCTTGCCAA +
Preference number: 6 (lower is better)
Translates to: WFSCQGCCPSHT*SSPSWPACSCQ
Trigger: TTGGCAAGAACAAGCTGGCCAAGATGGTGAAGACCATGTGTGAGAAGGGCAACATCCCTGGCAGGAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CAA 72 bp GATCTGTTTGTTAGGATGGGATGTGCTCACAGGCATTaGCATGGCCACCTGTTGGTTGGTGCCATGTGTACC +
Preference number: 6 (lower is better)
Translates to: DLFVRMGCAHRH*HGHLLVGAMCT
Trigger: GGTACACATGGCACCAACCAACAGGTGGCCATGCAAATGCCTGTGAGCACATCCCATCCTAACAAACAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 72 bp CCCATGGGAACCTTCAGAAAGCAAGTGTTTCAGGTTTaGAATGAGGCTGCAAATAGTCCCATGGCTATGGGC +
Preference number: 6 (lower is better)
Translates to: PMGTFRKQVFQV*NEAANSPMAMG
Trigger: GCCCATAGCCATGGGACTATTTGCAGCCTCATTCCAAACCTGAAACACTTGCTTTCTGAAGGTTCCCATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 72 bp AGGGCTCACTACAGTAGGAGAAGTCACAAGAGTCTCTaGTCCGGTTACAGTCTAGCTTTGCTTTCACTGGTC +
Preference number: 6 (lower is better)
Translates to: RAHYSRRSHKSL*SGYSLALLSLV
Trigger: GACCAGTGAAAGCAAAGCTAGACTGTAACCGGACCAGAGACTCTTGTGACTTCTCCTACTGTAGTGAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CAA 72 bp AGTCACAAGAGTCTCTGGTCCGGTTACAGTCTAGCTTaGCTTTCACTGGTCTCCCAGGGTACCTTTCAACAG +
Preference number: 6 (lower is better)
Translates to: SHKSLWSGYSLA*LSLVSQGTFQQ
Trigger: CTGTTGAAAGGTACCCTGGGAGACCAGTGAAAGCAAAGCTAGACTGTAACCGGACCAGAGACTCTTGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS GCA 72 bp TTGATGATGACATCATTGCTGCATTCGTCAACCATCTaGGTCTGGGAGCTTGAATGGAGGGAAGATGGGACT +
Preference number: 6 (lower is better)
Translates to: LMMTSLLHSSTI*VWELEWREDGT
Trigger: AGTCCCATCTTCCCTCCATTCAAGCTCCCAGACGCAGATGGTTGACGAATGCAGCAATGATGTCATCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 72 bp AGGTTTGGAATGAGGCTGCAAATAGTCCCATGGCTATaGGCCCAGCTGACCAATTTGGACAGATTCTCAGAT +
Preference number: 6 (lower is better)
Translates to: RFGMRLQIVPWL*AQLTNLDRFSD
Trigger: ATCTGAGAATCTGTCCAAATTGGTCAGCTGGGCCCATAGCCATGGGACTATTTGCAGCCTCATTCCAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 72 bp TGTTTCAGGTTTGGAATGAGGCTGCAAATAGTCCCATaGCTATGGGCCCAGCTGACCAATTTGGACAGATTC +
Preference number: 6 (lower is better)
Translates to: CFRFGMRLQIVP*LWAQLTNLDRF
Trigger: GAATCTGTCCAAATTGGTCAGCTGGGCCCATAGCCATGGGACTATTTGCAGCCTCATTCCAAACCTGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 72 bp TTAAAACTTCTGTTATCCTGGAAACAGACCCTCTCTTaGGACCCAGCTCTGCAAGTAGCTGTTAGTGGCCAG +
Preference number: 6 (lower is better)
Translates to: LKLLLSWKQTLS*DPALQVAVSGQ
Trigger: CTGGCCACTAACAGCTACTTGCAGAGCTGGGTCCCAAGAGAGGGTCTGTTTCCAGGATAACAGAAGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CCA 72 bp CACATTCAAGGCGTACCGCGTGGCTTTGGTAGTATTTaGGCTTACTGCACTGGTACACAGATCATTCAAGTC +
Preference number: 6 (lower is better)
Translates to: HIQGVPRGFGSI*AYCTGTQIIQV
Trigger: GACTTGAATGATCTGTGTACCAGTGCAGTAAGCCCAAATACTACCAAAGCCACGCGGTACGCCTTGAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS CAA 90 bp CTTTTCCGCAGGATGAGCTCGTCAGCAAAGGTGAGCTTCATGGACTaGTGTGGCTTATTTCCTTTTCCTTTACAGCGGAGTTCAATTTGC +
Preference number: 6 (lower is better)
Translates to: LFRRMSSSAKVSFMD*CGLFPFPLQRSSIC
Trigger: GCAAATTGAACTCCGCTGTAAAGGAAAAGGAAATAAGCCACACAAGTCCATGAAGCTCACCTTTGCTGACGAGCTCATCCTGCGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CAA 72 bp AGGATGAGCTCGTCAGCAAAGGTGAGCTTCATGGACTaGTGTGGCTTATTTCCTTTTCCTTTACAGCGGAGT +
Preference number: 6 (lower is better)
Translates to: RMSSSAKVSFMD*CGLFPFPLQRS
Trigger: ACTCCGCTGTAAAGGAAAAGGAAATAAGCCACACAAGTCCATGAAGCTCACCTTTGCTGACGAGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS TCA 72 bp ATGGGCCCAGCTGACCAATTTGGACAGATTCTCAGATaGGGTATGAAGACAATCCTCCATGTTACAGGATCA +
Preference number: 6 (lower is better)
Translates to: MGPADQFGQILR*GMKTILHVTGS
Trigger: TGATCCTGTAACATGGAGGATTGTCTTCATACCTCATCTGAGAATCTGTCCAAATTGGTCAGCTGGGCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS GCA 72 bp GGCGTACCGCGTGGCTTTGGTAGTATTTGGGCTTACTaGACTGGTACACAGATCATTCAAGTCATCATTAAT +
Preference number: 6 (lower is better)
Translates to: GVPRGFGSIWAY*TGTQIIQVIIN
Trigger: ATTAATGATGACTTGAATGATCTGTGTACCAGTGCAGTAAGCCCAAATACTACCAAAGCCACGCGGTACGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337530.11
ENST00000536272.5
CDS GCA 72 bp GGCTTATTTCCTTTTCCTTTACAGCGGAGTTCAATTTaGTTCTGCTTCAGGGCCTCTTGGGAACGCTTGAAT +
Preference number: 6 (lower is better)
Translates to: GLFPFPLQRSSI*FCFRASWERLN
Trigger: ATTCAAGCGTTCCCAAGAGGCCCTGAAGCAGAAGCAAATTGAACTCCGCTGTAAAGGAAAAGGAAATAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CCA 72 bp GAGCTCGTCAGCAAAGGTGAGCTTCATGGACTTGTGTaGCTTATTTCCTTTTCCTTTACAGCGGAGTTCAAT +
Preference number: 6 (lower is better)
Translates to: ELVSKGELHGLV*LISFSFTAEFN
Trigger: ATTGAACTCCGCTGTAAAGGAAAAGGAAATAAGCCACACAAGTCCATGAAGCTCACCTTTGCTGACGAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS CAA 72 bp AGGTCTTTTGCGAGCAATGCTTTGAGGCCTTTGGGTTaGGGGTTCAAAGTCACTATCCTCATCTGTAACAGA +
Preference number: 6 (lower is better)
Translates to: RSFASNALRPLG*GFKVTILICNR
Trigger: TCTGTTACAGATGAGGATAGTGACTTTGAACCCCAAACCCAAAGGCCTCAAAGCATTGCTCGCAAAAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CAA 72 bp TGGCTTATTTCCTTTTCCTTTACAGCGGAGTTCAATTaGCTTCTGCTTCAGGGCCTCTTGGGAACGCTTGAA +
Preference number: 6 (lower is better)
Translates to: WLISFSFTAEFN*LLLQGLLGTLE
Trigger: TTCAAGCGTTCCCAAGAGGCCCTGAAGCAGAAGCAAATTGAACTCCGCTGTAAAGGAAAAGGAAATAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374244.3
CDS GCA 72 bp GGCTGGTCCATCTACTCCTCCTGTCAGTTCTGCATTTaGCACAATGTAATAATCTTCGGGGATTTCTTGTTT +
Preference number: 6 (lower is better)
Translates to: GWSIYSSCQFCI*HNVIIFGDFLF
Trigger: AAACAAGAAATCCCCGAAGATTATTACATTGTGGCAAATGCAGAACTGACAGGAGGAGTAGATGGACCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CAA 90 bp TGTCAGTTCTGCATTTGCCACAATGTAATAATCTTCGGGGATTTCTaGTTTGATTTTCTTGATGATGACATCATTGCTGCATTCGTCAAC +
Preference number: 6 (lower is better)
Translates to: CQFCICHNVIIFGDF*FDFLDDDIIAAFVN
Trigger: GTTGACGAATGCAGCAATGATGTCATCATCAAGAAAATCAAACAAGAAATCCCCGAAGATTATTACATTGTGGCAAATGCAGAACTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5
CDS CAA 72 bp TGCATTTGCCACAATGTAATAATCTTCGGGGATTTCTaGTTTGATTTTCTTGATGATGACATCATTGCTGCA +
Preference number: 6 (lower is better)
Translates to: CICHNVIIFGDF*FDFLDDDIIAA
Trigger: TGCAGCAATGATGTCATCATCAAGAAAATCAAACAAGAAATCCCCGAAGATTATTACATTGTGGCAAATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337530.11
ENST00000374244.3
ENST00000536272.5