RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIAA1841 (Homo sapiens)

Ensembl gene IDs: ENSG00000162929

Ensembl transcript IDs: ENST00000295031.9, ENST00000356719.6, ENST00000402291.6, ENST00000453186.5, ENST00000453873.5, ENST00000471625.1, ENST00000482513.5, ENST00000483509.1, ENST00000483700.1, ENST00000488322.2, ENST00000612149.1

Found 421 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AACATTCTAGCAGTGGGACAGGACGGCAAATCTCCGCCTTCACCTTaGTCACGAAGTGTAACCATGTGGTCCCTCACTTTACAGCCCTTT +
Preference number: 1 (lower is better)
Translates to: NILAVGQDGKSPPSP*SRSVTMWSLTLQPF
Trigger: AAAGGGCTGTAAAGTGAGGGACCACATGGTTACACTTCGTGATCAAGGTGAAGGCGGAGATTTGCCGTCCTGTCCCACTGCTAGAATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR TCA 90 bp TTTCAGTCATTCGCCGTTGATCGTCTTCTCTTTGTGCATCCTGGTTaGATCTCAAGGATCTTGTGGCATCCCACTTATTCTTCTGCATAC +
Preference number: 1 (lower is better)
Translates to: FQSFAVDRLLFVHPG*ISRILWHPTYSSAY
Trigger: GTATGCAGAAGAATAAGTGGGATGCCACAAGATCCTTGAGATTCAACCAGGATGCACAAAGAGAAGACGATCAACGGCGAATGACTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR GCA 90 bp ACTGTATCTTTTGAAAAAGGCACAACAATGACATCTCTGTACTTGTaGAAATCGTCCAACATTCTAGCAGTGGGACAGGACGGCAAATCT +
Preference number: 1 (lower is better)
Translates to: TVSFEKGTTMTSLYL*KSSNILAVGQDGKS
Trigger: AGATTTGCCGTCCTGTCCCACTGCTAGAATGTTGGACGATTTGCACAAGTACAGAGATGTCATTGTTGTGCCTTTTTCAAAAGATACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR TCA 90 bp CAATACAGAGAAAGGCCTGATAACATCTTGAACAAGTCAGCCAATTaGTTGTTCCCCACAATCGCCAGTATACATCTCTCCAAGATTTTA +
Preference number: 1 (lower is better)
Translates to: QYRERPDNILNKSAN*LFPTIASIHLSKIL
Trigger: TAAAATCTTGGAGAGATGTATACTGGCGATTGTGGGGAACAATCAATTGGCTGACTTGTTCAAGATGTTATCAGGCCTTTCTCTGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR GCA 90 bp TATCGATGTAAATCTGTCCAATGTTCTTCCATATCTTTGTGTCTCTaGCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCATGTATT +
Preference number: 1 (lower is better)
Translates to: YRCKSVQCSSISLCL*LTICQAVFQVLSCI
Trigger: AATACATGAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAGACACAAAGATATGGAAGAACATTGGACAGATTTACATCGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
3UTR CCA 90 bp ACACAAACAGCATCTATACAATGTTGCTGCATTACTCCGAGAATCTaGATTCAAGTACTCAGGATCAAACAGTCTTTCAATCTTCTTACA +
Preference number: 1 (lower is better)
Translates to: TQTASIQCCCITPRI*IQVLRIKQSFNLLT
Trigger: TGTAAGAAGATTGAAAGACTGTTTGATCCTGAGTACTTGAATCCAGATTCTCGGAGTAATGCAGCAACATTGTATAGATGCTGTTTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR CCA 90 bp AGCTATACGTGTGAGAAGATTTGCATTAATACAGTTCATGTTGCATaGGGTAGCTACTATGGCATTCATATTTTTGTGGCAATACTGAAT +
Preference number: 1 (lower is better)
Translates to: SYTCEKICINTVHVA*GSYYGIHIFVAILN
Trigger: ATTCAGTATTGCCACAAAAATATGAATGCCATAGTAGCTACCCCATGCAACATGAACTGTATTAATGCAAATCTTCTCACACGTATAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR TCA 90 bp ACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTaGGACCTGTCACTCCTTAATATTCATGCAGACTTAAAATTAGCA +
Preference number: 1 (lower is better)
Translates to: TVLKYLTLKLHLMQS*DLSLLNIHADLKLA
Trigger: TGCTAATTTTAAGTCTGCATGAATATTAAGGAGTGACAGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR GCA 90 bp TCTGAAGATCTTCAAGAAGTGAGCAATTTCAGATGTCCAGAAGAGTaGCTTCTCTCTTTTTACTTATATTTTAAGGTACTTTATGCAGGA +
Preference number: 1 (lower is better)
Translates to: SEDLQEVSNFRCPEE*LLSFYLYFKVLYAG
Trigger: TCCTGCATAAAGTACCTTAAAATATAAGTAAAAAGAGAGAAGGCACTCTTCTGGACATCTGAAATTGCTCACTTCTTGAAGATCTTCAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR CAA 90 bp CAACATTCTAGCAGTGGGACAGGACGGCAAATCTCCGCCTTCACCTaGATCACGAAGTGTAACCATGTGGTCCCTCACTTTACAGCCCTT +
Preference number: 2 (lower is better)
Translates to: QHSSSGTGRQISAFT*ITKCNHVVPHFTAL
Trigger: AAGGGCTGTAAAGTGAGGGACCACATGGTTACACTTCGTGATCAAGGTGAAGGCGGAGATTTGCCGTCCTGTCCCACTGCTAGAATGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR TCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGCTGGTCTCAAACTCCTaGCCTCAGGTGATCTGCCCG +
Preference number: 2 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVLVSNS*PQVICP
Trigger: CGGGCAGATCACCTGAGGTCAGGAGTTTGAGACCAG...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR GCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGCTCGGCCTCCCAAAGTaGTGGGATTACTGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVLGLPK*WDYWRE
Trigger: CTCACGCCAGTAATCCCAGCACTTTGGGAGGCCGAG...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR GCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGATGATCTCAGCTCACTaGAACCTCTGCCACCCGGGT +
Preference number: 2 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVMISAH*NLCHPG
Trigger: ACCCGGGTGGCAGAGGTTGCAGTGAGCTGAGATCAT...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR TCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGAGGAGCGCAGAAACATaGTCTCAGCTCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVRSAET*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCATGTTTCTGCGCTCCT...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR TCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGTCTCCGCCTTCACCTTaGTCACGAAGTGTAACCATG +
Preference number: 2 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVSPPSP*SRSVTM
Trigger: CATGGTTACACTTCGTGATCAAGGTGAAGGCGGAGA...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR TCA 90 bp AAGCTGAGTAGGATCAAACCGAAGAACCTTTTGGTTACAGCAGGGATAAATTCCAACGTCGCAATGAACTaGAATGTCCACCTCTTCCCA +
Preference number: 2 (lower is better)
Translates to: KLSRIKPKNLLVTAGINSNVAMN*NVHLFP
Trigger: TGGGAAGAGGTGGACATTTCAGTTCATTGCGACGTT...GGAATTTATCCCTGCTGTAACCAAAAGGTTCTTCGGTTTGATCCTACTCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR CCA 90 bp CACTTATTCTTCTGCATACTCATAACGAAAGGAGACACATCTCTAGAAGCTGACCGAAGTGTAACCATGTaGTCCCTCACTTTACAGCCC +
Preference number: 2 (lower is better)
Translates to: HLFFCILITKGDTSLEADRSVTM*SLTLQP
Trigger: GGGCTGTAAAGTGAGGGACCACATGGTTACACTTCG...GTCAGCTTCTAGAGATGTGTCTCCTTTCGTTATGAGTATGCAGAAGAATAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR TCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGGCCAACAGTATTCAATaGACTTGCTGCAGTAGGATA +
Preference number: 2 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVANSIQ*TCCSRI
Trigger: TATCCTACTGCAGCAAGTTCATTGAATACTGTTGGC...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR GCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGCTACAATCAGTGCCATaGATGGTAACACTACCAGTT +
Preference number: 2 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVLQSVP*MVTLPV
Trigger: AACTGGTAGTGTTACCATGCATGGCACTGATTGTAG...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR CAA 90 bp CTAACTGTATCTTTTGAAAAAGGCACAACAATGACATCTCTGTACTaGTGCAAATCGTCCAACATTCTAGCAGTGGGACAGGACGGCAAA +
Preference number: 2 (lower is better)
Translates to: LTVSFEKGTTMTSLY*CKSSNILAVGQDGK
Trigger: TTTGCCGTCCTGTCCCACTGCTAGAATGTTGGACGATTTGCACAAGTACAGAGATGTCATTGTTGTGCCTTTTTCAAAAGATACAGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR TCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGCATTTAATGCAGTCTTaGGACCTGTCACTCCTTAAT +
Preference number: 2 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVHLMQS*DLSLLN
Trigger: ATTAAGGAGTGACAGGTCTCAAGACTGCATTAAATG...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR CCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACACCTCTTCCCAGCGCTaGGCATCCATAGATAAATAT +
Preference number: 2 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYTSSQR*ASIDKY
Trigger: ATATTTATCTATGGATGCCCAGCGCTGGGAAGAGGT...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR CCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGTCTCTTTGTGCATCCTaGTTGAATCTCAAGGATCTT +
Preference number: 2 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVSLCAS*LNLKDL
Trigger: AAGATCCTTGAGATTCAACCAGGATGCACAAAGAGA...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR TCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACAAAGATCTTCAAGAAGTaGGCAATTTCAGATGTCCAG +
Preference number: 2 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTKIFKK*AISDVQ
Trigger: CTGGACATCTGAAATTGCTCACTTCTTGAAGATCTT...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR TCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACAAAAAACTTGGCTACCTaGCAGTTTAGGCCTTTCTTT +
Preference number: 2 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTKNLAT*QFRPFF
Trigger: AAAGAAAGGCCTAAACTGTCAGGTAGCCAAGTTTTT...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR GCA 90 bp AAGCTGAGTAGGATCAAACCGAAGAACCTTTTGGTTACAGCAGGGATAAATTCCTCTATACAATGTTGCTaGATTACTCCGAGAATCTGG +
Preference number: 2 (lower is better)
Translates to: KLSRIKPKNLLVTAGINSSIQCC*ITPRIW
Trigger: CCAGATTCTCGGAGTAATGCAGCAACATTGTATAGA...GGAATTTATCCCTGCTGTAACCAAAAGGTTCTTCGGTTTGATCCTACTCAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR TCA 90 bp CACTTATTCTTCTGCATACTCATAACGAAAGGAGACACATCTCTAGAAGCTGACAGTCCAGTTTTTCAATaGCAAGAAAGCATTGAGCTC +
Preference number: 2 (lower is better)
Translates to: HLFFCILITKGDTSLEADSPVFQ*QESIEL
Trigger: GAGCTCAATGCTTTCTTGTCATTGAAAAACTGGACT...GTCAGCTTCTAGAGATGTGTCTCCTTTCGTTATGAGTATGCAGAAGAATAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR GCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACAAGATGTCCAGAAGAGTaGCTTCTCTCTTTTTACTTA +
Preference number: 2 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTRCPEE*LLSFYL
Trigger: TAAGTAAAAAGAGAGAAGGCACTCTTCTGGACATCT...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR CCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTAACAGTTCATGTTGCATaGGGTAGCTACTATGGCATT +
Preference number: 2 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILTVHVA*GSYYGI
Trigger: AATGCCATAGTAGCTACCCCATGCAACATGAACTGT...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR CAA 90 bp GACCTGTCACTCCTTAATATTCATGCAGACTTAAAATTAGCATCATaGGGAATTTCGTCACACAACCTGCAGTTCTCAATGCTATCTCAA +
Preference number: 2 (lower is better)
Translates to: DLSLLNIHADLKLAS*GISSHNLQFSMLSQ
Trigger: TTGAGATAGCATTGAGAACTGCAGGTTGTGTGACGAAATTCCCAATGATGCTAATTTTAAGTCTGCATGAATATTAAGGAGTGACAGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR TCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTAAGATCTTCAAGAAGTaGGCAATTTCAGATGTCCAG +
Preference number: 2 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPKIFKK*AISDVQ
Trigger: CTGGACATCTGAAATTGCTCACTTCTTGAAGATCTT...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR TCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATAAGATCTTCAAGAAGTaGGCAATTTCAGATGTCCAG +
Preference number: 2 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHKIFKK*AISDVQ
Trigger: CTGGACATCTGAAATTGCTCACTTCTTGAAGATCTT...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR TCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTAAAGATCTTCAAGAAGTaGGCAATTTCAGATGTCCAG +
Preference number: 2 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILKIFKK*AISDVQ
Trigger: CTGGACATCTGAAATTGCTCACTTCTTGAAGATCTT...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR TCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATTGGAAGTCATTGTTCTaGAGATCTTCAAGAAGTGAG +
Preference number: 2 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHWKSLF*RSSRSE
Trigger: CTCACTTCTTGAAGATCTTCAGAACAATGACTTCCA...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR TCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGAAAAACTTGGCTACCTaGCAGTTTAGGCCTTTCTTT +
Preference number: 2 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMKNLAT*QFRPFF
Trigger: AAAGAAAGGCCTAAACTGTCAGGTAGCCAAGTTTTT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR TCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAAAGTACTTCATTTCTaGTATCAAAAGATCTCGCGG +
Preference number: 2 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYKVLHF*YQKISR
Trigger: CCGCGAGATCTTTTGATATCAGAAATGAAGTACTTT...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR GCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTACCTGCAGTTCTCAATaGTATCTCAAGATTTACAGC +
Preference number: 2 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPTCSSQ*YLKIYS
Trigger: GCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGT...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR CAA 90 bp AGATCAGCTATACGTGTGAGAAGATTTGCATTAATACAGTTCATGTaGCATGGGGTAGCTACTATGGCATTCATATTTTTGTGGCAATAC +
Preference number: 2 (lower is better)
Translates to: RSAIRVRRFALIQFM*HGVATMAFIFLWQY
Trigger: GTATTGCCACAAAAATATGAATGCCATAGTAGCTACCCCATGCAACATGAACTGTATTAATGCAAATCTTCTCACACGTATAGCTGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR GCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTAGATGTCCAGAAGAGTaGCTTCTCTCTTTTTACTTA +
Preference number: 2 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPRCPEE*LLSFYL
Trigger: TAAGTAAAAAGAGAGAAGGCACTCTTCTGGACATCT...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR GCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGAGATGTCCAGAAGAGTaGCTTCTCTCTTTTTACTTA +
Preference number: 2 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMRCPEE*LLSFYL
Trigger: TAAGTAAAAAGAGAGAAGGCACTCTTCTGGACATCT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR CCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATAAAGGAAAACACTaGGAGTCTCAACTATGCAAA +
Preference number: 2 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYNKGKH*ESQLCK
Trigger: TTTGCATAGTTGAGACTCCCAGTGTTTTCCTTTATT...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR CCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGAATAAAGGAAAACACTaGGAGTCTCAACTATGCAAA +
Preference number: 2 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMNKGKH*ESQLCK
Trigger: TTTGCATAGTTGAGACTCCCAGTGTTTTCCTTTATT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR TCA 72 bp GCAGTGGGACAGGACGGCAAATCTCCGCCTTCACCTTaGTCACGAAGTGTAACCATGTGGTCCCTCACTTTA +
Preference number: 3 (lower is better)
Translates to: AVGQDGKSPPSP*SRSVTMWSLTL
Trigger: TAAAGTGAGGGACCACATGGTTACACTTCGTGATCAAGGTGAAGGCGGAGATTTGCCGTCCTGTCCCACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR CAA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGGGGTTCAAACAATTCTaGTGCCTCAGCCTCCCGAGT +
Preference number: 3 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVGFKQF*CLSLPS
Trigger: ACTCGGGAGGCTGAGGCACAAGAATTGTTTGAACCC...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR TCA 72 bp TATCAACCAGTTGAAAATGTGAACGTCGCAATGAACTaGAATGTCCACCTCTTCCCAGCGCTGGGCATCCAT +
Preference number: 3 (lower is better)
Translates to: YQPVENVNVAMN*NVHLFPALGIH
Trigger: ATGGATGCCCAGCGCTGGGAAGAGGTGGACATTTCAGTTCATTGCGACGTTCACATTTTCAACTGGTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR CCA 72 bp CGACTTTTAGACCTTGTGTTTTTCTCTGAGCTGCTTTaGCGTGCACTAACTGGCACTGAGGCCTTGATTTGT +
Preference number: 3 (lower is better)
Translates to: RLLDLVFFSELL*RALTGTEALIC
Trigger: ACAAATCAAGGCCTCAGTGCCAGTTAGTGCACGCCAAAGCAGCTCAGAGAAAAACACAAGGTCTAAAAGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR CAA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGATCTCCGCCTTCACCTaGATCACGAAGTGTAACCAT +
Preference number: 3 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVISAFT*ITKCNH
Trigger: ATGGTTACACTTCGTGATCAAGGTGAAGGCGGAGAT...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR TCA 72 bp TTCGCCGTTGATCGTCTTCTCTTTGTGCATCCTGGTTaGATCTCAAGGATCTTGTGGCATCCCACTTATTCT +
Preference number: 3 (lower is better)
Translates to: FAVDRLLFVHPG*ISRILWHPTYS
Trigger: AGAATAAGTGGGATGCCACAAGATCCTTGAGATTCAACCAGGATGCACAAAGAGAAGACGATCAACGGCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR CAA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGCAGGGGAGAAGCAGTTaGCCTTTTTACCATCAGTTA +
Preference number: 3 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVQGRSS*PFYHQL
Trigger: TAACTGATGGTAAAAAGGCAAACTGCTTCTCCCCTG...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR CAA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGCCACGTCGATCCACATaGATTTTTCCAGGAATGCAA +
Preference number: 3 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVPRRST*IFPGMQ
Trigger: TTGCATTCCTGGAAAAATCAATGTGGATCGACGTGG...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR CAA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGTTATGCAGGACGCCCTaGACCAAAACGACTTTTAGA +
Preference number: 3 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVLCRTP*TKTTFR
Trigger: TCTAAAAGTCGTTTTGGTCAAGGGCGTCCTGCATAA...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR TCA 72 bp GAAAGGCCTGATAACATCTTGAACAAGTCAGCCAATTaGTTGTTCCCCACAATCGCCAGTATACATCTCTCC +
Preference number: 3 (lower is better)
Translates to: ERPDNILNKSAN*LFPTIASIHLS
Trigger: GGAGAGATGTATACTGGCGATTGTGGGGAACAATCAATTGGCTGACTTGTTCAAGATGTTATCAGGCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR GCA 72 bp AATTTCAGTCATTCGCCGTTGATCGTCTTCTCTTTGTaGATCCTGGTTGAATCTCAAGGATCTTGTGGCATC +
Preference number: 3 (lower is better)
Translates to: NFSHSPLIVFSL*ILVESQGSCGI
Trigger: GATGCCACAAGATCCTTGAGATTCAACCAGGATGCACAAAGAGAAGACGATCAACGGCGAATGACTGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR CAA 90 bp AAATGTTCACTTCTGGGAAAAGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTGTTCTTCCATATCTTaGTGTCTCTGCCTCACGATA +
Preference number: 3 (lower is better)
Translates to: KCSLLGKEEDAGSSVIGYCSSIS*CLCLTI
Trigger: TATCGTGAGGCAGAGACACAAAGATATGGAAGAACA...ATACCCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCCAGAAGTGAACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
3UTR-3UTR CAA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGATGACATCTCTGTACTaGTGCAAATCGTCCAACATT +
Preference number: 3 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVMTSLY*CKSSNI
Trigger: AATGTTGGACGATTTGCACAAGTACAGAGATGTCAT...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR-3UTR CAA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATTAATACAGTTCATGTaGCATGGGGTAGCTACTATG +
Preference number: 3 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTLIQFM*HGVATM
Trigger: CATAGTAGCTACCCCATGCAACATGAACTGTATTAA...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR CCA 72 bp ATATGGTTGGGTTTTAGAGCCCTGAGAACTGTACAGTaGGTGTCTCATATAACAGAAATGATTTACTATCCT +
Preference number: 3 (lower is better)
Translates to: IWLGFRALRTVQ*VSHITEMIYYP
Trigger: AGGATAGTAAATCATTTCTGTTATATGAGACACCCACTGTACAGTTCTCAGGGCTCTAAAACCCAACCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR-3UTR CAA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTCTTCTTTCAAGTTTTTaGCTTCATCACACACATGGA +
Preference number: 3 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPLLSSF*LHHTHG
Trigger: TCCATGTGTGTGATGAAGCAAAAAACTTGAAAGAAG...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR CCA 72 bp AAACATCAAATGCTACTATGTAAAAATGCTGGGTGGTaGGTACCTGGATATTTGTTGTATTATCCTCTGTAC +
Preference number: 3 (lower is better)
Translates to: KHQMLLCKNAGW*VPGYLLYYPLY
Trigger: GTACAGAGGATAATACAACAAATATCCAGGTACCCACCACCCAGCATTTTTACATAGTAGCATTTGATGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295031.9
3UTR CCA 72 bp TCAAAACATCAAATGCTACTATGTAAAAATGCTGGGTaGTGGGTACCTGGATATTTGTTGTATTATCCTCTG +
Preference number: 3 (lower is better)
Translates to: SKHQMLLCKNAG*WVPGYLLYYPL
Trigger: CAGAGGATAATACAACAAATATCCAGGTACCCACCACCCAGCATTTTTACATAGTAGCATTTGATGTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295031.9
3UTR CCA 72 bp TGTGAGAAGATTTGCATTAATACAGTTCATGTTGCATaGGGTAGCTACTATGGCATTCATATTTTTGTGGCA +
Preference number: 3 (lower is better)
Translates to: CEKICINTVHVA*GSYYGIHIFVA
Trigger: TGCCACAAAAATATGAATGCCATAGTAGCTACCCCATGCAACATGAACTGTATTAATGCAAATCTTCTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR TCA 72 bp AAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTaGGACCTGTCACTCCTTAATATTCATGCAGACTTA +
Preference number: 3 (lower is better)
Translates to: KYLTLKLHLMQS*DLSLLNIHADL
Trigger: TAAGTCTGCATGAATATTAAGGAGTGACAGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
3UTR TCA 72 bp TGTGAATATAGACAATATTTCCACGTCGATCCACATTaGTTTTTCCAGGAATGCAAGGAATTCTTCTTTCTG +
Preference number: 3 (lower is better)
Translates to: CEYRQYFHVDPH*FFQECKEFFFL
Trigger: CAGAAAGAAGAATTCCTTGCATTCCTGGAAAAATCAATGTGGATCGACGTGGAAATATTGTCTATATTCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR TCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACACCCGCGCTCGCGCCCTaGAGCTGCCGCTACCGAGCC +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTPALAP*SCRYRA
Trigger: GGCTCGGTAGCGGCAGCTTCAGGGCGCGAGCGCGGG...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453186.5
CDS-3UTR GCA 90 bp CATATCTTTGTGTCTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCGCGGGCGGGACGGTCTaGAGGGACATGGACCGGGCG +
Preference number: 4 (lower is better)
Translates to: HIFVSLPHDMSSSIPSPFAGGTV*RDMDRA
Trigger: CGCCCGGTCCATGTCCCTGCAGACCGTCCCGCCCGC...GAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAGACACAAAGATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR GCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGCCACAGGGCCGCGGCTaGCCTCGCAGCGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVPQGRG*PRSASV
Trigger: AACAGAGGCGCTGCGAGGGCAGCCGCGGCCCTGTGG...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453186.5
CDS-3UTR TCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGCCCGCGCTCGCGCCCTaGAGCTGCCGCTACCGAGCC +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMPALAP*SCRYRA
Trigger: GGCTCGGTAGCGGCAGCTTCAGGGCGCGAGCGCGGG...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453186.5
CDS-3UTR CCA 90 bp CTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCATGTATTAATTCGCGGGCGCGCAGAAGCTaGGGTTCCCGCCGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: LCLTICQAVFQVLSCINSRARRS*GSRRCA
Trigger: CGCACAGCGGCGGGAACCCCAGCTTCTGCGCGCCCG...CGAATTAATACATGAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR GCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGAGCGCCTCTGTTACCTaGAGTGGTCGGCACCGCCCG +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVSASVT*SGRHRP
Trigger: CGGGCGGTGCCGACCACTGCAGGTAACAGAGGCGCT...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453186.5
CDS-3UTR GCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACCCACAGGGCCGCGGCTaGCCTCGCAGCGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYPQGRG*PRSASV
Trigger: AACAGAGGCGCTGCGAGGGCAGCCGCGGCCCTGTGG...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453186.5
3UTR CAA 72 bp AGCAGTGGGACAGGACGGCAAATCTCCGCCTTCACCTaGATCACGAAGTGTAACCATGTGGTCCCTCACTTT +
Preference number: 4 (lower is better)
Translates to: SSGTGRQISAFT*ITKCNHVVPHF
Trigger: AAAGTGAGGGACCACATGGTTACACTTCGTGATCAAGGTGAAGGCGGAGATTTGCCGTCCTGTCCCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR CCA 90 bp CAAATGCTACTATGTAAAAATGCTGGGTGGTGGGTACCTGGATATTTGTTGTATCCCCGCTCCCGCCCGTaGAGGCACAGAAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: QMLLCKNAGWWVPGYLLYPRSRP*RHRNSR
Trigger: CCTGGAGTTTCTGTGCCTCCACGGGCGGGAGCGGGG...ATACAACAAATATCCAGGTACCCACCACCCAGCATTTTTACATAGTAGCATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACCTCTGTTACCTGCAGTaGTCGGCACCGCCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYLCYLQ*SAPPAL
Trigger: GAGCGCGGGCGGTGCCGACCACTGCAGGTAACAGAG...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453186.5
CDS-3UTR GCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGAGCGCCTCTGTTACCTaGAGTGGTCGGCACCGCCCG +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMSASVT*SGRHRP
Trigger: CGGGCGGTGCCGACCACTGCAGGTAACAGAGGCGCT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453186.5
CDS-3UTR CCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGCTCTGTTACCTGCAGTaGTCGGCACCGCCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMLCYLQ*SAPPAL
Trigger: GAGCGCGGGCGGTGCCGACCACTGCAGGTAACAGAG...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453186.5
CDS-3UTR TCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGTTGCTTCCTTTGACTTaGCTCGGTCCAGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVLLPLT*LGPDPP
Trigger: TGGGGGATCTGGACCGAGTCAAGTCAAAGGAAGCAA...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAACTCGGCCTCCCAAAGTaGTGGGATTACTGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKLGLPK*WDYWRE
Trigger: CTCACGCCAGTAATCCCAGCACTTTGGGAGGCCGAG...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACAAGGAGCGCAGAAACATaGTCTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTRSAET*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCATGTTTCTGCGCTCCT...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACTCGGCCTCCCAAAGTaGTGGGATTACTGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILLGLPK*WDYWRE
Trigger: CTCACGCCAGTAATCCCAGCACTTTGGGAGGCCGAG...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACATGATCTCAGCTCACTaGAACCTCTGCCACCCGGGT +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYMISAH*NLCHPG
Trigger: ACCCGGGTGGCAGAGGTTGCAGTGAGCTGAGATCAT...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp CATATCTTTGTGTCTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCTCAATTTCCTCATCTTaGGCCCGGAGGCTCACTACG +
Preference number: 4 (lower is better)
Translates to: HIFVSLPHDMSSSIPSPFSISSS*ARRLTT
Trigger: CGTAGTGAGCCTCCGGGCCCAAGATGAGGAAATTGA...GAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAGACACAAAGATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGCGAAGTGTAACCATGTaGTCCCTCACTTTACAGCCC +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVRSVTM*SLTLQP
Trigger: GGGCTGTAAAGTGAGGGACCACATGGTTACACTTCG...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp AAATGTTCACTTCTGGGAAAAGAAGAGGATGCAGGATCCTCGGTGATAGGGTATAACGTCGCAATGAACTaGAATGTCCACCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KCSLLGKEEDAGSSVIGYNVAMN*NVHLFP
Trigger: TGGGAAGAGGTGGACATTTCAGTTCATTGCGACGTT...ATACCCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCCAGAAGTGAACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGAACGTCGCAATGAACTaGAATGTCCACCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVNVAMN*NVHLFP
Trigger: TGGGAAGAGGTGGACATTTCAGTTCATTGCGACGTT...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGAACAAGTCAGCCAATTaGTTGTTCCCCACAATCGCC +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVNKSAN*LFPTIA
Trigger: GGCGATTGTGGGGAACAATCAATTGGCTGACTTGTT...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGTCAGTCATTCGCCGTTaGTCGTCTTCTCTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVSVIRR*SSSLCA
Trigger: TGCACAAAGAGAAGACGATCAACGGCGAATGACTGA...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp AGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTATTGCTTCCTTTGACTTaGCTCGGTCCAGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: RRGCRILGDRVFGMFYVLLLPLT*LGPDPP
Trigger: TGGGGGATCTGGACCGAGTCAAGTCAAAGGAAGCAA...TAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATCCTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAATTGCTTCCTTTGACTTaGCTCGGTCCAGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKLLPLT*LGPDPP
Trigger: TGGGGGATCTGGACCGAGTCAAGTCAAAGGAAGCAA...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp AAGCTGAGTAGGATCAAACCGAAGAACCTTTTGGTTACAGCAGGGATAAATTCCCCTTGTGTTTTTCTCTaGGCTGCTTTGGCGTGCACT +
Preference number: 4 (lower is better)
Translates to: KLSRIKPKNLLVTAGINSPCVFL*AALACT
Trigger: AGTGCACGCCAAAGCAGCTCAGAGAAAAACACAAGG...GGAATTTATCCCTGCTGTAACCAAAAGGTTCTTCGGTTTGATCCTACTCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR TCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACACCTTGTGTTTTTCTCTaGGCTGCTTTGGCGTGCACT +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTPCVFL*AALACT
Trigger: AGTGCACGCCAAAGCAGCTCAGAGAAAAACACAAGG...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGTATGCAGGACGCCCTTaGCCAAAACGACTTTTAGAC +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVYAGRP*PKRLLD
Trigger: GTCTAAAAGTCGTTTTGGTCAAGGGCGTCCTGCATA...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGTCCAGGCACGAGCCTTaGTATAGTTTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVSRHEP*YSFPVD
Trigger: ATCAACTGGGAAACTATAGCAAGGCTCGTGCCTGGA...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTATGATCTCAGCTCACTaGAACCTCTGCCACCCGGGT +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPMISAH*NLCHPG
Trigger: ACCCGGGTGGCAGAGGTTGCAGTGAGCTGAGATCAT...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGGCTTCATCACACACATaGATCACCATGTTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVASSHT*ITMFGP
Trigger: AGGGCCAAACATGGTGATCCATGTGTGTGATGAAGC...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453873.5
CDS-3UTR CCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACACGAAGTGTAACCATGTaGTCCCTCACTTTACAGCCC +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTRSVTM*SLTLQP
Trigger: GGGCTGTAAAGTGAGGGACCACATGGTTACACTTCG...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACAAACGTCGCAATGAACTaGAATGTCCACCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTNVAMN*NVHLFP
Trigger: TGGGAAGAGGTGGACATTTCAGTTCATTGCGACGTT...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGCACGTCGATCCACATTaGTTTTTCCAGGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVHVDPH*FFQECK
Trigger: CTTGCATTCCTGGAAAAATCAATGTGGATCGACGTG...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp AAGCTGAGTAGGATCAAACCGAAGAACCTTTTGGTTACAGCAGGGATAAATTCCAACAAGTCAGCCAATTaGTTGTTCCCCACAATCGCC +
Preference number: 4 (lower is better)
Translates to: KLSRIKPKNLLVTAGINSNKSAN*LFPTIA
Trigger: GGCGATTGTGGGGAACAATCAATTGGCTGACTTGTT...GGAATTTATCCCTGCTGTAACCAAAAGGTTCTTCGGTTTGATCCTACTCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR TCA 90 bp CATATCTTTGTGTCTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCCAGCCCTTTGTAAGCTaGGTAGGATCAAACCGAAGA +
Preference number: 4 (lower is better)
Translates to: HIFVSLPHDMSSSIPSPFQPFVS*VGSNRR
Trigger: TCTTCGGTTTGATCCTACTCAGCTTACAAAGGGCTG...GAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAGACACAAAGATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp AGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTATCTCCGCCTTCACCTTaGTCACGAAGTGTAACCATG +
Preference number: 4 (lower is better)
Translates to: RRGCRILGDRVFGMFYVLSPPSP*SRSVTM
Trigger: CATGGTTACACTTCGTGATCAAGGTGAAGGCGGAGA...TAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATCCTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACTCTCCGCCTTCACCTTaGTCACGAAGTGTAACCATG +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYSPPSP*SRSVTM
Trigger: CATGGTTACACTTCGTGATCAAGGTGAAGGCGGAGA...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACAATGACAAGAAAGCATTaGGCTCCCCAGTTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTMTRKH*APQFWD
Trigger: GTCCCAAAACTGGGGAGCTCAATGCTTTCTTGTCAT...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp AAATGTTCACTTCTGGGAAAAGAAGAGGATGCAGGATCCTCGGTGATAGGGTATCACATCTCTAGAAGCTaGCTTCTCCAATGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: KCSLLGKEEDAGSSVIGYHISRS*LLQCLF
Trigger: GAAAAGGCATTGGAGAAGTCAGCTTCTAGAGATGTG...ATACCCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCCAGAAGTGAACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp AAATGTTCACTTCTGGGAAAAGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTTGTGCATCCTGGTTaGATCTCAAGGATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: KCSLLGKEEDAGSSVIGYFVHPG*ISRILW
Trigger: CCACAAGATCCTTGAGATTCAACCAGGATGCACAAA...ATACCCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCCAGAAGTGAACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTTTGCTTCCTTTGACTTaGCTCGGTCCAGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPLLPLT*LGPDPP
Trigger: TGGGGGATCTGGACCGAGTCAAGTCAAAGGAAGCAA...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTATTGCTTCCTTTGACTTaGCTCGGTCCAGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILLLPLT*LGPDPP
Trigger: TGGGGGATCTGGACCGAGTCAAGTCAAAGGAAGCAA...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp ATGTTCACTTCTGGGAAAAGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTTTCTTTTGCTTCCTTTaGCTTGACTCGGTCCAGATC +
Preference number: 4 (lower is better)
Translates to: MFTSGKRRGCRILGDRVFFFCFL*LDSVQI
Trigger: GATCTGGACCGAGTCAAGTCAAAGGAAGCAAAAGAA...AAATACCCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCCAGAAGTGAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAACCTTGTGTTTTTCTCTaGGCTGCTTTGGCGTGCACT +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKPCVFL*AALACT
Trigger: AGTGCACGCCAAAGCAGCTCAGAGAAAAACACAAGG...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACCCTTGTGTTTTTCTCTaGGCTGCTTTGGCGTGCACT +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYPCVFL*AALACT
Trigger: AGTGCACGCCAAAGCAGCTCAGAGAAAAACACAAGG...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTAAGGAGCGCAGAAACATaGTCTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILRSAET*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCATGTTTCTGCGCTCCT...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTAGGAGCGCAGAAACATaGTCTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPRSAET*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCATGTTTCTGCGCTCCT...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGAGGAGCGCAGAAACATaGTCTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMRSAET*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCATGTTTCTGCGCTCCT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp AGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTAGGGAAAAGAAGAGGATaGAGGATCCTCGGTGATAGG +
Preference number: 4 (lower is better)
Translates to: RRGCRILGDRVFGMFYVLGKRRG*RILGDR
Trigger: CCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCC...TAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATCCTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR GCA 90 bp TCAGCAAAGTACTTCATTTCTGATATCAAAAGATCTCGCGGGCAAGTAAAATCTATGATCTCAGCTCACTaGAACCTCTGCCACCCGGGT +
Preference number: 4 (lower is better)
Translates to: SAKYFISDIKRSRGQVKSMISAH*NLCHPG
Trigger: ACCCGGGTGGCAGAGGTTGCAGTGAGCTGAGATCAT...AGATTTTACTTGCCCGCGAGATCTTTTGATATCAGAAATGAAGTACTTTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR CCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACAGCTTCATCACACACATaGATCACCATGTTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTASSHT*ITMFGP
Trigger: AGGGCCAAACATGGTGATCCATGTGTGTGATGAAGC...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453873.5
CDS-3UTR CCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAATTCTCTGAGCTGCTTTaGCGTGCACTAACTGGCACT +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKFSELL*RALTGT
Trigger: AGTGCCAGTTAGTGCACGCCAAAGCAGCTCAGAGAA...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAACGTCGCAATGAACTaGAATGTCCACCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYNVAMN*NVHLFP
Trigger: TGGGAAGAGGTGGACATTTCAGTTCATTGCGACGTT...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACACACGTCGATCCACATTaGTTTTTCCAGGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTHVDPH*FFQECK
Trigger: CTTGCATTCCTGGAAAAATCAATGTGGATCGACGTG...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp AAGCTGAGTAGGATCAAACCGAAGAACCTTTTGGTTACAGCAGGGATAAATTCCCACGTCGATCCACATTaGTTTTTCCAGGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: KLSRIKPKNLLVTAGINSHVDPH*FFQECK
Trigger: CTTGCATTCCTGGAAAAATCAATGTGGATCGACGTG...GGAATTTATCCCTGCTGTAACCAAAAGGTTCTTCGGTTTGATCCTACTCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR TCA 90 bp AGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTAAACAAGTCAGCCAATTaGTTGTTCCCCACAATCGCC +
Preference number: 4 (lower is better)
Translates to: RRGCRILGDRVFGMFYVLNKSAN*LFPTIA
Trigger: GGCGATTGTGGGGAACAATCAATTGGCTGACTTGTT...TAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATCCTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAACAAGTCAGCCAATTaGTTGTTCCCCACAATCGCC +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYNKSAN*LFPTIA
Trigger: GGCGATTGTGGGGAACAATCAATTGGCTGACTTGTT...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp ATGTTCACTTCTGGGAAAAGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTGCCAACAGTATTCAATaGACTTGCTGCAGTAGGATA +
Preference number: 4 (lower is better)
Translates to: MFTSGKRRGCRILGDRVFANSIQ*TCCSRI
Trigger: TATCCTACTGCAGCAAGTTCATTGAATACTGTTGGC...AAATACCCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCCAGAAGTGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACCAGCCCTTTGTAAGCTaGGTAGGATCAAACCGAAGA +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYQPFVS*VGSNRR
Trigger: TCTTCGGTTTGATCCTACTCAGCTTACAAAGGGCTG...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAACAGCCCTTTGTAAGCTaGGTAGGATCAAACCGAAGA +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKQPFVS*VGSNRR
Trigger: TCTTCGGTTTGATCCTACTCAGCTTACAAAGGGCTG...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGTCTCCGCCTTCACCTTaGTCACGAAGTGTAACCATG +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMSPPSP*SRSVTM
Trigger: CATGGTTACACTTCGTGATCAAGGTGAAGGCGGAGA...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATTCTCCGCCTTCACCTTaGTCACGAAGTGTAACCATG +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHSPPSP*SRSVTM
Trigger: CATGGTTACACTTCGTGATCAAGGTGAAGGCGGAGA...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CGATGTAAATCTGTCCAATGTTCTTCCATATCTTTGTGTCTCTGCCTCACGATAATGACAAGAAAGCATTaGGCTCCCCAGTTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: RCKSVQCSSISLCLCLTIMTRKH*APQFWD
Trigger: GTCCCAAAACTGGGGAGCTCAATGCTTTCTTGTCAT...TATCGTGAGGCAGAGACACAAAGATATGGAAGAACATTGGACAGATTTACATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp CACTTATTCTTCTGCATACTCATAACGAAAGGAGACACATCTCTAGAAGCTGACATGACAAGAAAGCATTaGGCTCCCCAGTTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: HLFFCILITKGDTSLEADMTRKH*APQFWD
Trigger: GTCCCAAAACTGGGGAGCTCAATGCTTTCTTGTCAT...GTCAGCTTCTAGAGATGTGTCTCCTTTCGTTATGAGTATGCAGAAGAATAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR TCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAAATGACAAGAAAGCATTaGGCTCCCCAGTTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKMTRKH*APQFWD
Trigger: GTCCCAAAACTGGGGAGCTCAATGCTTTCTTGTCAT...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATTTGTGCATCCTGGTTaGATCTCAAGGATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTFVHPG*ISRILW
Trigger: CCACAAGATCCTTGAGATTCAACCAGGATGCACAAA...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCATGTATTAATTCGTCAGTCATTCGCCGTTaGTCGTCTTCTCTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LCLTICQAVFQVLSCINSSVIRR*SSSLCA
Trigger: TGCACAAAGAGAAGACGATCAACGGCGAATGACTGA...CGAATTAATACATGAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATTCTTTTGCTTCCTTTaGCTTGACTCGGTCCAGATC +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTFFCFL*LDSVQI
Trigger: GATCTGGACCGAGTCAAGTCAAAGGAAGCAAAAGAA...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTTGCACTAACTGGCACTaGGGCCTTGATTTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPCTNWH*GLDLCF
Trigger: GAAGCACAAATCAAGGCCTCAGTGCCAGTTAGTGCA...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTATGCACTAACTGGCACTaGGGCCTTGATTTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILCTNWH*GLDLCF
Trigger: GAAGCACAAATCAAGGCCTCAGTGCCAGTTAGTGCA...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATTGCACTAACTGGCACTaGGGCCTTGATTTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHCTNWH*GLDLCF
Trigger: GAAGCACAAATCAAGGCCTCAGTGCCAGTTAGTGCA...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCATGTATTAATTCGTCCAGGCACGAGCCTTaGTATAGTTTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LCLTICQAVFQVLSCINSSRHEP*YSFPVD
Trigger: ATCAACTGGGAAACTATAGCAAGGCTCGTGCCTGGA...CGAATTAATACATGAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR GCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGTCCAGTTTTGGAAACTaGATCATGTCCAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVSSFGN*IMSNWS
Trigger: ACTCCAGTTGGACATGATGCAGTTTCCAAAACTGGA...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453873.5
CDS-3UTR GCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGTTTCGTCACACAACCTaGAGTTCTCAATGCTATCTC +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVFRHTT*SSQCYL
Trigger: GAGATAGCATTGAGAACTGCAGGTTGTGTGACGAAA...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATGCATCATGTCCAACTaGAGTCTCCTGAAATTCTCC +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTCIMSN*SLLKFS
Trigger: GGAGAATTTCAGGAGACTCCAGTTGGACATGATGCA...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp CTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCATGTATTAATTCGGCTTCATCACACACATaGATCACCATGTTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LCLTICQAVFQVLSCINSASSHT*ITMFGP
Trigger: AGGGCCAAACATGGTGATCCATGTGTGTGATGAAGC...CGAATTAATACATGAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGACAGTTCATGTTGCATaGGGTAGCTACTATGGCATT +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVTVHVA*GSYYGI
Trigger: AATGCCATAGTAGCTACCCCATGCAACATGAACTGT...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp CAAATGCTACTATGTAAAAATGCTGGGTGGTGGGTACCTGGATATTTGTTGTATCGAAGTGTAACCATGTaGTCCCTCACTTTACAGCCC +
Preference number: 4 (lower is better)
Translates to: QMLLCKNAGWWVPGYLLYRSVTM*SLTLQP
Trigger: GGGCTGTAAAGTGAGGGACCACATGGTTACACTTCG...ATACAACAAATATCCAGGTACCCACCACCCAGCATTTTTACATAGTAGCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp CGATGTAAATCTGTCCAATGTTCTTCCATATCTTTGTGTCTCTGCCTCACGATAACACAGTGCCGTCTCTaGGTCTCAGTTTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RCKSVQCSSISLCLCLTITQCRL*VSVCLF
Trigger: AAACAGACAAACTGAGACCCAGAGACGGCACTGTGT...TATCGTGAGGCAGAGACACAAAGATATGGAAGAACATTGGACAGATTTACATCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp AAATGTTCACTTCTGGGAAAAGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTGTAAAAATGCTGGGTaGTGGGTACCTGGATATTTG +
Preference number: 4 (lower is better)
Translates to: KCSLLGKEEDAGSSVIGYCKNAG*WVPGYL
Trigger: CAAATATCCAGGTACCCACCACCCAGCATTTTTACA...ATACCCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCCAGAAGTGAACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATTTCTCTGAGCTGCTTTaGCGTGCACTAACTGGCACT +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHFSELL*RALTGT
Trigger: AGTGCCAGTTAGTGCACGCCAAAGCAGCTCAGAGAA...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTTTCTCTGAGCTGCTTTaGCGTGCACTAACTGGCACT +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPFSELL*RALTGT
Trigger: AGTGCCAGTTAGTGCACGCCAAAGCAGCTCAGAGAA...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAAGCTTCATCACACACATaGATCACCATGTTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKASSHT*ITMFGQ
Trigger: CTGGCCAAACATGGTGATCCATGTGTGTGATGAAGC...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453186.5
ENST00000612149.1
CDS-3UTR TCA 90 bp AGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTACCAACTGGAGTCTCCTaGAATTCTCCATGTATGTCA +
Preference number: 4 (lower is better)
Translates to: RRGCRILGDRVFGMFYVLPTGVS*NSPCMS
Trigger: TGACATACATGGAGAATTTCAGGAGACTCCAGTTGG...TAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATCCTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACCCAACTGGAGTCTCCTaGAATTCTCCATGTATGTCA +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYPTGVS*NSPCMS
Trigger: TGACATACATGGAGAATTTCAGGAGACTCCAGTTGG...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTAAACGTCGCAATGAACTaGAATGTCCACCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILNVAMN*NVHLFP
Trigger: TGGGAAGAGGTGGACATTTCAGTTCATTGCGACGTT...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACCACGTCGATCCACATTaGTTTTTCCAGGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYHVDPH*FFQECK
Trigger: CTTGCATTCCTGGAAAAATCAATGTGGATCGACGTG...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGAACAAGTCAGCCAATTaGTTGTTCCCCACAATCGCC +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMNKSAN*LFPTIA
Trigger: GGCGATTGTGGGGAACAATCAATTGGCTGACTTGTT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTCAGCCCTTTGTAAGCTaGGTAGGATCAAACCGAAGA +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPQPFVS*VGSNRR
Trigger: TCTTCGGTTTGATCCTACTCAGCTTACAAAGGGCTG...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAGCCCTTTGTAAGCTaGGTAGGATCAAACCGAAGA +
Preference number: 4 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILQPFVS*VGSNRR
Trigger: TCTTCGGTTTGATCCTACTCAGCTTACAAAGGGCTG...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGATGACAAGAAAGCATTaGGCTCCCCAGTTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMMTRKH*APQFWD
Trigger: GTCCCAAAACTGGGGAGCTCAATGCTTTCTTGTCAT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACCACATCTCTAGAAGCTaGCTTCTCCAATGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYHISRS*LLQCLF
Trigger: GAAAAGGCATTGGAGAAGTCAGCTTCTAGAGATGTG...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAACACATCTCTAGAAGCTaGCTTCTCCAATGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKHISRS*LLQCLF
Trigger: GAAAAGGCATTGGAGAAGTCAGCTTCTAGAGATGTG...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATTCAGTCATTCGCCGTTaGTCGTCTTCTCTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHSVIRR*SSSLCA
Trigger: TGCACAAAGAGAAGACGATCAACGGCGAATGACTGA...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTATCAGTCATTCGCCGTTaGTCGTCTTCTCTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILSVIRR*SSSLCA
Trigger: TGCACAAAGAGAAGACGATCAACGGCGAATGACTGA...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAATTCTTTTGCTTCCTTTaGCTTGACTCGGTCCAGATC +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKFFCFL*LDSVQI
Trigger: GATCTGGACCGAGTCAAGTCAAAGGAAGCAAAAGAA...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTATATGCAGGACGCCCTTaGCCAAAACGACTTTTAGAC +
Preference number: 4 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILYAGRP*PKRLLD
Trigger: GTCTAAAAGTCGTTTTGGTCAAGGGCGTCCTGCATA...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTTATGCAGGACGCCCTTaGCCAAAACGACTTTTAGAC +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPYAGRP*PKRLLD
Trigger: GTCTAAAAGTCGTTTTGGTCAAGGGCGTCCTGCATA...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATTCCAGGCACGAGCCTTaGTATAGTTTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHSRHEP*YSFPVD
Trigger: ATCAACTGGGAAACTATAGCAAGGCTCGTGCCTGGA...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTTCCAGGCACGAGCCTTaGTATAGTTTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPSRHEP*YSFPVD
Trigger: ATCAACTGGGAAACTATAGCAAGGCTCGTGCCTGGA...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATCCAGTTTTGGAAACTaGATCATGTCCAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTSSFGN*IMSNWS
Trigger: ACTCCAGTTGGACATGATGCAGTTTCCAAAACTGGA...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453873.5
CDS-3UTR GCA 90 bp ATGTTCACTTCTGGGAAAAGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTTCTATACAATGTTGCTaGATTACTCCGAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: MFTSGKRRGCRILGDRVFSIQCC*ITPRIW
Trigger: CCAGATTCTCGGAGTAATGCAGCAACATTGTATAGA...AAATACCCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCCAGAAGTGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR GCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGTCTATACAATGTTGCTaGATTACTCCGAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVSIQCC*ITPRIW
Trigger: CCAGATTCTCGGAGTAATGCAGCAACATTGTATAGA...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGGCATCTATACAATGTTaGTGCATTACTCCGAGAATC +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVASIQC*CITPRI
Trigger: GATTCTCGGAGTAATGCAGCAACATTGTATAGATGC...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp ATGTTCACTTCTGGGAAAAGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTATCGTCTTCTCTTTGTaGATCCTGGTTGAATCTCAA +
Preference number: 4 (lower is better)
Translates to: MFTSGKRRGCRILGDRVFIVFSL*ILVESQ
Trigger: TTGAGATTCAACCAGGATGCACAAAGAGAAGACGAT...AAATACCCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCCAGAAGTGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR GCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACACTACAATCAGTGCCATaGATGGTAACACTACCAGTT +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTLQSVP*MVTLPV
Trigger: AACTGGTAGTGTTACCATGCATGGCACTGATTGTAG...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGCCAGAATAGTGGAGTaGTTAAGTGTGCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHARIVE*LSVQTL
Trigger: CAGAGTCTGCACACTTAACCACTCCACTATTCTGGC...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453186.5
CDS-3UTR CCA 90 bp ATGTTCACTTCTGGGAAAAGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTATTAGGGAATTATACTaGTTGTCAACAGGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: MFTSGKRRGCRILGDRVFIRELY*LSTGEL
Trigger: AAGCTCGCCTGTTGACAACCAGTATAATTCCCTAAT...AAATACCCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCCAGAAGTGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp AGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTATGCATCATGTCCAACTaGAGTCTCCTGAAATTCTCC +
Preference number: 4 (lower is better)
Translates to: RRGCRILGDRVFGMFYVLCIMSN*SLLKFS
Trigger: GGAGAATTTCAGGAGACTCCAGTTGGACATGATGCA...TAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATCCTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAATGCATCATGTCCAACTaGAGTCTCCTGAAATTCTCC +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKCIMSN*SLLKFS
Trigger: GGAGAATTTCAGGAGACTCCAGTTGGACATGATGCA...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACTGCATCATGTCCAACTaGAGTCTCCTGAAATTCTCC +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYCIMSN*SLLKFS
Trigger: GGAGAATTTCAGGAGACTCCAGTTGGACATGATGCA...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAAACCTCTTCCCAGCGCTaGGCATCCATAGATAAATAT +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKTSSQR*ASIDKY
Trigger: ATATTTATCTATGGATGCCCAGCGCTGGGAAGAGGT...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATTTGTGCTTCCAGCCTaGAATAAATACCTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTFVLPA*NKYLLQ
Trigger: TTGCAGGAGGTATTTATTCCAGGCTGGAAGCACAAA...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTGCTTCATCACACACATaGATCACCATGTTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPASSHT*ITMFGQ
Trigger: CTGGCCAAACATGGTGATCCATGTGTGTGATGAAGC...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453186.5
ENST00000612149.1
CDS-3UTR TCA 90 bp ATATCTTTGTGTCTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCATCCCAGTTGATAGTCTaGGGGATTCCAATTAATGGA +
Preference number: 4 (lower is better)
Translates to: ISLCLCLTICQAVFQVLSSQLIV*GIPING
Trigger: TCCATTAATTGGAATCCCTCAGACTATCAACTGGGA...TGAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAGACACAAAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp ATGTTCACTTCTGGGAAAAGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTATGTATGTCAAGAAGTaGGGATTTGATATATGTGGC +
Preference number: 4 (lower is better)
Translates to: MFTSGKRRGCRILGDRVFMYVKK*GFDICG
Trigger: GCCACATATATCAAATCCTCACTTCTTGACATACAT...AAATACCCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCCAGAAGTGAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTCCAACTGGAGTCTCCTaGAATTCTCCATGTATGTCA +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPPTGVS*NSPCMS
Trigger: TGACATACATGGAGAATTTCAGGAGACTCCAGTTGG...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp AAATGTTCACTTCTGGGAAAAGAAGAGGATGCAGGATCCTCGGTGATAGGGTATAAAGTACTTCATTTCTaGTATCAAAAGATCTCGCGG +
Preference number: 4 (lower is better)
Translates to: KCSLLGKEEDAGSSVIGYKVLHF*YQKISR
Trigger: CCGCGAGATCTTTTGATATCAGAAATGAAGTACTTT...ATACCCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCCAGAAGTGAACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGAAAGTACTTCATTTCTaGTATCAAAAGATCTCGCGG +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVKVLHF*YQKISR
Trigger: CCGCGAGATCTTTTGATATCAGAAATGAAGTACTTT...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACGCCAACAGTATTCAATaGACTTGCTGCAGTAGGATA +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYANSIQ*TCCSRI
Trigger: TATCCTACTGCAGCAAGTTCATTGAATACTGTTGGC...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGCACATCTCTAGAAGCTaGCTTCTCCAATGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMHISRS*LLQCLF
Trigger: GAAAAGGCATTGGAGAAGTCAGCTTCTAGAGATGTG...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTTTTGTGCATCCTGGTTaGATCTCAAGGATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPFVHPG*ISRILW
Trigger: CCACAAGATCCTTGAGATTCAACCAGGATGCACAAA...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTATTTGTGCATCCTGGTTaGATCTCAAGGATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILFVHPG*ISRILW
Trigger: CCACAAGATCCTTGAGATTCAACCAGGATGCACAAA...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATTTCTTTTGCTTCCTTTaGCTTGACTCGGTCCAGATC +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHFFCFL*LDSVQI
Trigger: GATCTGGACCGAGTCAAGTCAAAGGAAGCAAAAGAA...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTATTCTTTTGCTTCCTTTaGCTTGACTCGGTCCAGATC +
Preference number: 4 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILFFCFL*LDSVQI
Trigger: GATCTGGACCGAGTCAAGTCAAAGGAAGCAAAAGAA...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp AAGCTGAGTAGGATCAAACCGAAGAACCTTTTGGTTACAGCAGGGATAAATTCCAAGATCTTCAAGAAGTaGGCAATTTCAGATGTCCAG +
Preference number: 4 (lower is better)
Translates to: KLSRIKPKNLLVTAGINSKIFKK*AISDVQ
Trigger: CTGGACATCTGAAATTGCTCACTTCTTGAAGATCTT...GGAATTTATCCCTGCTGTAACCAAAAGGTTCTTCGGTTTGATCCTACTCAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR TCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACACATTTAATGCAGTCTTaGGACCTGTCACTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTHLMQS*DLSLLN
Trigger: ATTAAGGAGTGACAGGTCTCAAGACTGCATTAAATG...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CAAATGCTACTATGTAAAAATGCTGGGTGGTGGGTACCTGGATATTTGTTGTATCAGGCGAGCTTCCACTaGTCTTTAATTCATCAAACC +
Preference number: 4 (lower is better)
Translates to: QMLLCKNAGWWVPGYLLYQASFH*SLIHQT
Trigger: GGTTTGATGAATTAAAGAGCAGTGGAAGCTCGCCTG...ATACAACAAATATCCAGGTACCCACCACCCAGCATTTTTACATAGTAGCATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR GCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGCAGGCGAGCTTCCACTaGTCTTTAATTCATCAAACC +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMQASFH*SLIHQT
Trigger: GGTTTGATGAATTAAAGAGCAGTGGAAGCTCGCCTG...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTCAGGCGAGCTTCCACTaGTCTTTAATTCATCAAACC +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPQASFH*SLIHQT
Trigger: GGTTTGATGAATTAAAGAGCAGTGGAAGCTCGCCTG...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATCAGGCGAGCTTCCACTaGTCTTTAATTCATCAAACC +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHQASFH*SLIHQT
Trigger: GGTTTGATGAATTAAAGAGCAGTGGAAGCTCGCCTG...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp AGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTATCCAGTTTTGGAAACTaGATCATGTCCAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: RRGCRILGDRVFGMFYVLSSFGN*IMSNWS
Trigger: ACTCCAGTTGGACATGATGCAGTTTCCAAAACTGGA...TAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATCCTCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR GCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATCTATACAATGTTGCTaGATTACTCCGAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTSIQCC*ITPRIW
Trigger: CCAGATTCTCGGAGTAATGCAGCAACATTGTATAGA...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGAGGGATAAATTCCAGTaGCAACAGTATTCAATGAAC +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVRDKFQ*QQYSMN
Trigger: GTTCATTGAATACTGTTGGCACTGGAATTTATCCCT...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACAATCGTCTTCTCTTTGTaGATCCTGGTTGAATCTCAA +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTIVFSL*ILVESQ
Trigger: TTGAGATTCAACCAGGATGCACAAAGAGAAGACGAT...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGAGATGTCCAGAAGAGTaGCTTCTCTCTTTTTACTTA +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVRCPEE*LLSFYL
Trigger: TAAGTAAAAAGAGAGAAGGCACTCTTCTGGACATCT...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACAACCTGCAGTTCTCAATaGTATCTCAAGATTTACAGC +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTTCSSQ*YLKIYS
Trigger: GCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGT...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAATTTCGTCACACAACCTaGAGTTCTCAATGCTATCTC +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKFRHTT*SSQCYL
Trigger: GAGATAGCATTGAGAACTGCAGGTTGTGTGACGAAA...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTGCCAGTTTTGGAAACTaGATCATGTCCAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPASFGN*IMSNWS
Trigger: ACTCCAGTTGGACATGATGCAGTTTCCAAAACTGGC...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453186.5
ENST00000612149.1
CDS-3UTR GCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGGCCAGTTTTGGAAACTaGATCATGTCCAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMASFGN*IMSNWS
Trigger: ACTCCAGTTGGACATGATGCAGTTTCCAAAACTGGC...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453186.5
ENST00000612149.1
CDS-3UTR CCA 90 bp GATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTATTTCAAAGCCAGAATAGTGGAGTaGTTAAGTGTGCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: DAGSSVIGYLECFMSYFKARIVE*LSVQTL
Trigger: CAGAGTCTGCACACTTAACCACTCCACTATTCTGGC...TTTGAAATAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp CGATGTAAATCTGTCCAATGTTCTTCCATATCTTTGTGTCTCTGCCTCACGATAATGGATCACCATGTTTaGCCCTTCAGATTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RCKSVQCSSISLCLCLTIMDHHV*PFRFFS
Trigger: ACTGAAGAATCTGAAGGGCCAAACATGGTGATCCAT...TATCGTGAGGCAGAGACACAAAGATATGGAAGAACATTGGACAGATTTACATCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATACCTCTTCCCAGCGCTaGGCATCCATAGATAAATAT +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHTSSQR*ASIDKY
Trigger: ATATTTATCTATGGATGCCCAGCGCTGGGAAGAGGT...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTACCTCTTCCCAGCGCTaGGCATCCATAGATAAATAT +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPTSSQR*ASIDKY
Trigger: ATATTTATCTATGGATGCCCAGCGCTGGGAAGAGGT...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACACAGTTCATGTTGCATaGGGTAGCTACTATGGCATT +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYTVHVA*GSYYGI
Trigger: AATGCCATAGTAGCTACCCCATGCAACATGAACTGT...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp CATATCTTTGTGTCTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCATTACTCCGAGAATCTaGATTCAAGTACTCAGGATC +
Preference number: 4 (lower is better)
Translates to: HIFVSLPHDMSSSIPSPFITPRI*IQVLRI
Trigger: GATCCTGAGTACTTGAATCCAGATTCTCGGAGTAAT...GAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAGACACAAAGATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp AAGCTGAGTAGGATCAAACCGAAGAACCTTTTGGTTACAGCAGGGATAAATTCCATTACTCCGAGAATCTaGATTCAAGTACTCAGGATC +
Preference number: 4 (lower is better)
Translates to: KLSRIKPKNLLVTAGINSITPRI*IQVLRI
Trigger: GATCCTGAGTACTTGAATCCAGATTCTCGGAGTAAT...GGAATTTATCCCTGCTGTAACCAAAAGGTTCTTCGGTTTGATCCTACTCAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR CCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACAATCTCAAGGATCTTGTaGCATCCCACTTATTCTTCT +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTISRIL*HPTYSS
Trigger: AGAAGAATAAGTGGGATGCCACAAGATCCTTGAGAT...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp ATATCTTTGTGTCTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCAAAAAATGCTGGGTGGTaGGTACCTGGATATTTGTTG +
Preference number: 4 (lower is better)
Translates to: ISLCLCLTICQAVFQVLSKNAGW*VPGYLL
Trigger: CAACAAATATCCAGGTACCCACCACCCAGCATTTTT...TGAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAGACACAAAGATAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATTCCCAGTTGATAGTCTaGGGGATTCCAATTAATGGA +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHSQLIV*GIPING
Trigger: TCCATTAATTGGAATCCCTCAGACTATCAACTGGGA...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGTCCCAGTTGATAGTCTaGGGGATTCCAATTAATGGA +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMSQLIV*GIPING
Trigger: TCCATTAATTGGAATCCCTCAGACTATCAACTGGGA...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTTCCCAGTTGATAGTCTaGGGGATTCCAATTAATGGA +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPSQLIV*GIPING
Trigger: TCCATTAATTGGAATCCCTCAGACTATCAACTGGGA...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CACTTATTCTTCTGCATACTCATAACGAAAGGAGACACATCTCTAGAAGCTGACATCAACTTCATTGTGTaGGAACAGATCAGCTATACG +
Preference number: 4 (lower is better)
Translates to: HLFFCILITKGDTSLEADINFIV*EQISYT
Trigger: CGTATAGCTGATCTGTTCTCACACAATGAAGTTGAT...GTCAGCTTCTAGAGATGTGTCTCCTTTCGTTATGAGTATGCAGAAGAATAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR TCA 90 bp GATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTATTTCAAACACGTCGATCCACATTaGTTTTTCCAGGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: DAGSSVIGYLECFMSYFKHVDPH*FFQECK
Trigger: CTTGCATTCCTGGAAAAATCAATGTGGATCGACGTG...TTTGAAATAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGCCAACAGTATTCAATaGACTTGCTGCAGTAGGATA +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHANSIQ*TCCSRI
Trigger: TATCCTACTGCAGCAAGTTCATTGAATACTGTTGGC...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp AGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTAAGTCCAGTTTTTCAATaGCAAGAAAGCATTGAGCTC +
Preference number: 4 (lower is better)
Translates to: RRGCRILGDRVFGMFYVLSPVFQ*QESIEL
Trigger: GAGCTCAATGCTTTCTTGTCATTGAAAAACTGGACT...TAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATCCTCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAGTCCAGTTTTTCAATaGCAAGAAAGCATTGAGCTC +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYSPVFQ*QESIEL
Trigger: GAGCTCAATGCTTTCTTGTCATTGAAAAACTGGACT...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAAGATCTTCAAGAAGTaGGCAATTTCAGATGTCCAG +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYKIFKK*AISDVQ
Trigger: CTGGACATCTGAAATTGCTCACTTCTTGAAGATCTT...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAATGGAAGTCATTGTTCTaGAGATCTTCAAGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKWKSLF*RSSRSE
Trigger: CTCACTTCTTGAAGATCTTCAGAACAATGACTTCCA...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAAAAACTTGGCTACCTaGCAGTTTAGGCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYKNLAT*QFRPFF
Trigger: AAAGAAAGGCCTAAACTGTCAGGTAGCCAAGTTTTT...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACCATTTAATGCAGTCTTaGGACCTGTCACTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYHLMQS*DLSLLN
Trigger: ATTAAGGAGTGACAGGTCTCAAGACTGCATTAAATG...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CACTTATTCTTCTGCATACTCATAACGAAAGGAGACACATCTCTAGAAGCTGACCATTTAATGCAGTCTTaGGACCTGTCACTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: HLFFCILITKGDTSLEADHLMQS*DLSLLN
Trigger: ATTAAGGAGTGACAGGTCTCAAGACTGCATTAAATG...GTCAGCTTCTAGAGATGTGTCTCCTTTCGTTATGAGTATGCAGAAGAATAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR GCA 90 bp CTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCATGTATTAATTCGGCATCTATACAATGTTaGTGCATTACTCCGAGAATC +
Preference number: 4 (lower is better)
Translates to: LCLTICQAVFQVLSCINSASIQC*CITPRI
Trigger: GATTCTCGGAGTAATGCAGCAACATTGTATAGATGC...CGAATTAATACATGAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR GCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACAAGGGATAAATTCCAGTaGCAACAGTATTCAATGAAC +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTRDKFQ*QQYSMN
Trigger: GTTCATTGAATACTGTTGGCACTGGAATTTATCCCT...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACAACATCTCTGTACTTGTaGAAATCGTCCAACATTCTA +
Preference number: 4 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTTSLYL*KSSNIL
Trigger: TAGAATGTTGGACGATTTGCACAAGTACAGAGATGT...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTCTACAATCAGTGCCATaGATGGTAACACTACCAGTT +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPLQSVP*MVTLPV
Trigger: AACTGGTAGTGTTACCATGCATGGCACTGATTGTAG...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAAACCTGCAGTTCTCAATaGTATCTCAAGATTTACAGC +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKTCSSQ*YLKIYS
Trigger: GCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGT...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTTTTCGTCACACAACCTaGAGTTCTCAATGCTATCTC +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPFRHTT*SSQCYL
Trigger: GAGATAGCATTGAGAACTGCAGGTTGTGTGACGAAA...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAAATTAGGGAATTATACTaGTTGTCAACAGGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKIRELY*LSTGEL
Trigger: AAGCTCGCCTGTTGACAACCAGTATAATTCCCTAAT...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGATGGATCACCATGTTTaGCCCTTCAGATTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMMDHHV*PFRFFS
Trigger: ACTGAAGAATCTGAAGGGCCAAACATGGTGATCCAT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453873.5
CDS-3UTR CCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTAATGGATCACCATGTTTaGCCCTTCAGATTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILMDHHV*PFRFFS
Trigger: ACTGAAGAATCTGAAGGGCCAAACATGGTGATCCAT...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453873.5
CDS-3UTR CCA 90 bp GATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTATTTCAAAACCTCTTCCCAGCGCTaGGCATCCATAGATAAATAT +
Preference number: 4 (lower is better)
Translates to: DAGSSVIGYLECFMSYFKTSSQR*ASIDKY
Trigger: ATATTTATCTATGGATGCCCAGCGCTGGGAAGAGGT...TTTGAAATAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGACAGTTCATGTTGCATaGGGTAGCTACTATGGCATT +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMTVHVA*GSYYGI
Trigger: AATGCCATAGTAGCTACCCCATGCAACATGAACTGT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAAATTACTCCGAGAATCTaGATTCAAGTACTCAGGATC +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKITPRI*IQVLRI
Trigger: GATCCTGAGTACTTGAATCCAGATTCTCGGAGTAAT...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACATTACTCCGAGAATCTaGATTCAAGTACTCAGGATC +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYITPRI*IQVLRI
Trigger: GATCCTGAGTACTTGAATCCAGATTCTCGGAGTAAT...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp ATATCTTTGTGTCTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCAATCTCAAGGATCTTGTaGCATCCCACTTATTCTTCT +
Preference number: 4 (lower is better)
Translates to: ISLCLCLTICQAVFQVLSISRIL*HPTYSS
Trigger: AGAAGAATAAGTGGGATGCCACAAGATCCTTGAGAT...TGAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAGACACAAAGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp CGATGTAAATCTGTCCAATGTTCTTCCATATCTTTGTGTCTCTGCCTCACGATATCTCTTTGTGCATCCTaGTTGAATCTCAAGGATCTT +
Preference number: 4 (lower is better)
Translates to: RCKSVQCSSISLCLCLTISLCAS*LNLKDL
Trigger: AAGATCCTTGAGATTCAACCAGGATGCACAAAGAGA...TATCGTGAGGCAGAGACACAAAGATATGGAAGAACATTGGACAGATTTACATCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp CACTTATTCTTCTGCATACTCATAACGAAAGGAGACACATCTCTAGAAGCTGACTCTCTTTGTGCATCCTaGTTGAATCTCAAGGATCTT +
Preference number: 4 (lower is better)
Translates to: HLFFCILITKGDTSLEADSLCAS*LNLKDL
Trigger: AAGATCCTTGAGATTCAACCAGGATGCACAAAGAGA...GTCAGCTTCTAGAGATGTGTCTCCTTTCGTTATGAGTATGCAGAAGAATAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR CCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAATCTCTTTGTGCATCCTaGTTGAATCTCAAGGATCTT +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKSLCAS*LNLKDL
Trigger: AAGATCCTTGAGATTCAACCAGGATGCACAAAGAGA...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACTCTCTTTGTGCATCCTaGTTGAATCTCAAGGATCTT +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYSLCAS*LNLKDL
Trigger: AAGATCCTTGAGATTCAACCAGGATGCACAAAGAGA...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATTTTGTGCTTCCAGCCTaGAATAAATACCTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHFVLPA*NKYLLQ
Trigger: TTGCAGGAGGTATTTATTCCAGGCTGGAAGCACAAA...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTATTTGTGCTTCCAGCCTaGAATAAATACCTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILFVLPA*NKYLLQ
Trigger: TTGCAGGAGGTATTTATTCCAGGCTGGAAGCACAAA...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGAGCACTCTTTCTGCCTaGCTAGAAAAATTTAAACAT +
Preference number: 4 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVSTLSA*LEKFKH
Trigger: ATGTTTAAATTTTTCTAGCCAGGCAGAAAGAGTGCT...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAAAAAGTACTTCATTTCTaGTATCAAAAGATCTCGCGG +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKKVLHF*YQKISR
Trigger: CCGCGAGATCTTTTGATATCAGAAATGAAGTACTTT...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTATCAACTTCATTGTGTaGGAACAGATCAGCTATACG +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPINFIV*EQISYT
Trigger: CGTATAGCTGATCTGTTCTCACACAATGAAGTTGAT...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGATCAACTTCATTGTGTaGGAACAGATCAGCTATACG +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMINFIV*EQISYT
Trigger: CGTATAGCTGATCTGTTCTCACACAATGAAGTTGAT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATAGTCCAGTTTTTCAATaGCAAGAAAGCATTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHSPVFQ*QESIEL
Trigger: GAGCTCAATGCTTTCTTGTCATTGAAAAACTGGACT...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTAAGTCCAGTTTTTCAATaGCAAGAAAGCATTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILSPVFQ*QESIEL
Trigger: GAGCTCAATGCTTTCTTGTCATTGAAAAACTGGACT...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGAAGATCTTCAAGAAGTaGGCAATTTCAGATGTCCAG +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMKIFKK*AISDVQ
Trigger: CTGGACATCTGAAATTGCTCACTTCTTGAAGATCTT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTTGGAAGTCATTGTTCTaGAGATCTTCAAGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPWKSLF*RSSRSE
Trigger: CTCACTTCTTGAAGATCTTCAGAACAATGACTTCCA...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATAAAAACTTGGCTACCTaGCAGTTTAGGCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHKNLAT*QFRPFF
Trigger: AAAGAAAGGCCTAAACTGTCAGGTAGCCAAGTTTTT...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTAAAAACTTGGCTACCTaGCAGTTTAGGCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPKNLAT*QFRPFF
Trigger: AAAGAAAGGCCTAAACTGTCAGGTAGCCAAGTTTTT...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATTCTATACAATGTTGCTaGATTACTCCGAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHSIQCC*ITPRIW
Trigger: CCAGATTCTCGGAGTAATGCAGCAACATTGTATAGA...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTGCATCTATACAATGTTaGTGCATTACTCCGAGAATC +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPASIQC*CITPRI
Trigger: GATTCTCGGAGTAATGCAGCAACATTGTATAGATGC...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGGCATCTATACAATGTTaGTGCATTACTCCGAGAATC +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMASIQC*CITPRI
Trigger: GATTCTCGGAGTAATGCAGCAACATTGTATAGATGC...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp AGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTAAGGGATAAATTCCAGTaGCAACAGTATTCAATGAAC +
Preference number: 4 (lower is better)
Translates to: RRGCRILGDRVFGMFYVLRDKFQ*QQYSMN
Trigger: GTTCATTGAATACTGTTGGCACTGGAATTTATCCCT...TAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATCCTCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR GCA 90 bp CACTTATTCTTCTGCATACTCATAACGAAAGGAGACACATCTCTAGAAGCTGACAGGGATAAATTCCAGTaGCAACAGTATTCAATGAAC +
Preference number: 4 (lower is better)
Translates to: HLFFCILITKGDTSLEADRDKFQ*QQYSMN
Trigger: GTTCATTGAATACTGTTGGCACTGGAATTTATCCCT...GTCAGCTTCTAGAGATGTGTCTCCTTTCGTTATGAGTATGCAGAAGAATAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR GCA 90 bp CGATGTAAATCTGTCCAATGTTCTTCCATATCTTTGTGTCTCTGCCTCACGATAACATCTCTGTACTTGTaGAAATCGTCCAACATTCTA +
Preference number: 4 (lower is better)
Translates to: RCKSVQCSSISLCLCLTITSLYL*KSSNIL
Trigger: TAGAATGTTGGACGATTTGCACAAGTACAGAGATGT...TATCGTGAGGCAGAGACACAAAGATATGGAAGAACATTGGACAGATTTACATCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR GCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAAACATCTCTGTACTTGTaGAAATCGTCCAACATTCTA +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKTSLYL*KSSNIL
Trigger: TAGAATGTTGGACGATTTGCACAAGTACAGAGATGT...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACACATCTCTGTACTTGTaGAAATCGTCCAACATTCTA +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYTSLYL*KSSNIL
Trigger: TAGAATGTTGGACGATTTGCACAAGTACAGAGATGT...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAATCCCACTTATTCTTCTaGATACTCATAACGAAAGGA +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKSHLFF*ILITKG
Trigger: TCCTTTCGTTATGAGTATGCAGAAGAATAAGTGGGA...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTAATCGTCTTCTCTTTGTaGATCCTGGTTGAATCTCAA +
Preference number: 4 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILIVFSL*ILVESQ
Trigger: TTGAGATTCAACCAGGATGCACAAAGAGAAGACGAT...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGATCGTCTTCTCTTTGTaGATCCTGGTTGAATCTCAA +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMIVFSL*ILVESQ
Trigger: TTGAGATTCAACCAGGATGCACAAAGAGAAGACGAT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTATCGTCTTCTCTTTGTaGATCCTGGTTGAATCTCAA +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPIVFSL*ILVESQ
Trigger: TTGAGATTCAACCAGGATGCACAAAGAGAAGACGAT...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAGATGTCCAGAAGAGTaGCTTCTCTCTTTTTACTTA +
Preference number: 4 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYRCPEE*LLSFYL
Trigger: TAAGTAAAAAGAGAGAAGGCACTCTTCTGGACATCT...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATACCTGCAGTTCTCAATaGTATCTCAAGATTTACAGC +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHTCSSQ*YLKIYS
Trigger: GCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGT...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp TCAGCAAAGTACTTCATTTCTGATATCAAAAGATCTCGCGGGCAAGTAAAATCTTTTCGTCACACAACCTaGAGTTCTCAATGCTATCTC +
Preference number: 4 (lower is better)
Translates to: SAKYFISDIKRSRGQVKSFRHTT*SSQCYL
Trigger: GAGATAGCATTGAGAACTGCAGGTTGTGTGACGAAA...AGATTTTACTTGCCCGCGAGATCTTTTGATATCAGAAATGAAGTACTTTGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR CCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGATTAGGGAATTATACTaGTTGTCAACAGGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMIRELY*LSTGEL
Trigger: AAGCTCGCCTGTTGACAACCAGTATAATTCCCTAAT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATATTAGGGAATTATACTaGTTGTCAACAGGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHIRELY*LSTGEL
Trigger: AAGCTCGCCTGTTGACAACCAGTATAATTCCCTAAT...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp GATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTATTTCAAAACAGTTCATGTTGCATaGGGTAGCTACTATGGCATT +
Preference number: 4 (lower is better)
Translates to: DAGSSVIGYLECFMSYFKTVHVA*GSYYGI
Trigger: AATGCCATAGTAGCTACCCCATGCAACATGAACTGT...TTTGAAATAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATATCTCAAGGATCTTGTaGCATCCCACTTATTCTTCT +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHISRIL*HPTYSS
Trigger: AGAAGAATAAGTGGGATGCCACAAGATCCTTGAGAT...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTAATCTCAAGGATCTTGTaGCATCCCACTTATTCTTCT +
Preference number: 4 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILISRIL*HPTYSS
Trigger: AGAAGAATAAGTGGGATGCCACAAGATCCTTGAGAT...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGTCTCTTTGTGCATCCTaGTTGAATCTCAAGGATCTT +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMSLCAS*LNLKDL
Trigger: AAGATCCTTGAGATTCAACCAGGATGCACAAAGAGA...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTAAAGTACTTCATTTCTaGTATCAAAAGATCTCGCGG +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPKVLHF*YQKISR
Trigger: CCGCGAGATCTTTTGATATCAGAAATGAAGTACTTT...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR TCA 90 bp GATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTATTTCAAAATCAACTTCATTGTGTaGGAACAGATCAGCTATACG +
Preference number: 4 (lower is better)
Translates to: DAGSSVIGYLECFMSYFKINFIV*EQISYT
Trigger: CGTATAGCTGATCTGTTCTCACACAATGAAGTTGAT...TTTGAAATAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR TCA 90 bp TCAGCAAAGTACTTCATTTCTGATATCAAAAGATCTCGCGGGCAAGTAAAATCTAAAAACTTGGCTACCTaGCAGTTTAGGCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SAKYFISDIKRSRGQVKSKNLAT*QFRPFF
Trigger: AAAGAAAGGCCTAAACTGTCAGGTAGCCAAGTTTTT...AGATTTTACTTGCCCGCGAGATCTTTTGATATCAGAAATGAAGTACTTTGCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR GCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTAGGGATAAATTCCAGTaGCAACAGTATTCAATGAAC +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPRDKFQ*QQYSMN
Trigger: GTTCATTGAATACTGTTGGCACTGGAATTTATCCCT...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGACATCTCTGTACTTGTaGAAATCGTCCAACATTCTA +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMTSLYL*KSSNIL
Trigger: TAGAATGTTGGACGATTTGCACAAGTACAGAGATGT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTATCCCACTTATTCTTCTaGATACTCATAACGAAAGGA +
Preference number: 4 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILSHLFF*ILITKG
Trigger: TCCTTTCGTTATGAGTATGCAGAAGAATAAGTGGGA...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATTCCCACTTATTCTTCTaGATACTCATAACGAAAGGA +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHSHLFF*ILITKG
Trigger: TCCTTTCGTTATGAGTATGCAGAAGAATAAGTGGGA...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGTCCCACTTATTCTTCTaGATACTCATAACGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMSHLFF*ILITKG
Trigger: TCCTTTCGTTATGAGTATGCAGAAGAATAAGTGGGA...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp GATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTATTTCAAATCATCAAGAGCACACTaGTCAAACCACTTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: DAGSSVIGYLECFMSYFKSSRAH*SNHFFC
Trigger: ACAGAAAAAGTGGTTTGAGCAGTGTGCTCTTGATGA...TTTGAAATAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAAAATAAAGGAAAACACTaGGAGTCTCAACTATGCAAA +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKNKGKH*ESQLCK
Trigger: TTTGCATAGTTGAGACTCCCAGTGTTTTCCTTTATT...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAAAGCACTCTTTCTGCCTaGCTAGAAAAATTTAAACAT +
Preference number: 4 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKSTLSA*LEKFKH
Trigger: ATGTTTAAATTTTTCTAGCCAGGCAGAAAGAGTGCT...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGGCAGTTCAAAAACCTTaGCAAAGCCAGTTATCAAAT +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMAVQKP*QSQLSN
Trigger: ATTTGATAACTGGCTTTGCCAAGGTTTTTGAACTGC...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGCAGTTCAAAAACCTTaGCAAAGCCAGTTATCAAAT +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHAVQKP*QSQLSN
Trigger: ATTTGATAACTGGCTTTGCCAAGGTTTTTGAACTGC...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR GCA 90 bp GATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTATTTCAAATCCCACTTATTCTTCTaGATACTCATAACGAAAGGA +
Preference number: 4 (lower is better)
Translates to: DAGSSVIGYLECFMSYFKSHLFF*ILITKG
Trigger: TCCTTTCGTTATGAGTATGCAGAAGAATAAGTGGGA...TTTGAAATAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATAAGAACAATTCCTTGTaGAAGCTATACTATGTCTTC +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHKNNSL*KLYYVF
Trigger: GAAGACATAGTATAGCTTCCACAAGGAATTGTTCTT...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453873.5
CDS-3UTR CCA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGAAGAACAATTCCTTGTaGAAGCTATACTATGTCTTC +
Preference number: 4 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMKNNSL*KLYYVF
Trigger: GAAGACATAGTATAGCTTCCACAAGGAATTGTTCTT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453873.5
CDS-3UTR CCA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTAGCACTCTTTCTGCCTaGCTAGAAAAATTTAAACAT +
Preference number: 4 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPSTLSA*LEKFKH
Trigger: ATGTTTAAATTTTTCTAGCCAGGCAGAAAGAGTGCT...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATAGCACTCTTTCTGCCTaGCTAGAAAAATTTAAACAT +
Preference number: 4 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHSTLSA*LEKFKH
Trigger: ATGTTTAAATTTTTCTAGCCAGGCAGAAAGAGTGCT...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CCA 90 bp TCAGCAAAGTACTTCATTTCTGATATCAAAAGATCTCGCGGGCAAGTAAAATCTGCAGTTCAAAAACCTTaGCAAAGCCAGTTATCAAAT +
Preference number: 4 (lower is better)
Translates to: SAKYFISDIKRSRGQVKSAVQKP*QSQLSN
Trigger: ATTTGATAACTGGCTTTGCCAAGGTTTTTGAACTGC...AGATTTTACTTGCCCGCGAGATCTTTTGATATCAGAAATGAAGTACTTTGCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR CCA 90 bp GATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTATTTCAAAAAGAACAATTCCTTGTaGAAGCTATACTATGTCTTC +
Preference number: 4 (lower is better)
Translates to: DAGSSVIGYLECFMSYFKKNNSL*KLYYVF
Trigger: GAAGACATAGTATAGCTTCCACAAGGAATTGTTCTT...TTTGAAATAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CCA 90 bp TCAGCAAAGTACTTCATTTCTGATATCAAAAGATCTCGCGGGCAAGTAAAATCTAATAAAGGAAAACACTaGGAGTCTCAACTATGCAAA +
Preference number: 4 (lower is better)
Translates to: SAKYFISDIKRSRGQVKSNKGKH*ESQLCK
Trigger: TTTGCATAGTTGAGACTCCCAGTGTTTTCCTTTATT...AGATTTTACTTGCCCGCGAGATCTTTTGATATCAGAAATGAAGTACTTTGCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453186.5
3UTR CAA 72 bp ATACGTGTGAGAAGATTTGCATTAATACAGTTCATGTaGCATGGGGTAGCTACTATGGCATTCATATTTTTG +
Preference number: 4 (lower is better)
Translates to: IRVRRFALIQFM*HGVATMAFIFL
Trigger: CAAAAATATGAATGCCATAGTAGCTACCCCATGCAACATGAACTGTATTAATGCAAATCTTCTCACACGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS CCA 90 bp ATCTGGTTCAGATTAGTTAATCTCTGTGCCTCAATTTCCTCATCTTaGGCCCGGAGGCTCACTACGCGGCGCGTCCTCGGGGCACCCCCA +
Preference number: 5 (lower is better)
Translates to: IWFRLVNLCASISSS*ARRLTTRRVLGAPP
Trigger: TGGGGGTGCCCCGAGGACGCGCCGCGTAGTGAGCCTCCGGGCCCAAGATGAGGAAATTGAGGCACAGAGATTAACTAATCTGAACCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS TCA 90 bp GAACATCCCATGTCTTATCTACAATTGCCAGGTTGCCAGGCATGGTaGTGCACACCCATGGTCCTAGCTCAGGAGGCTGATGTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: EHPMSYLQLPGCQAW*CTPMVLAQEADVGG
Trigger: TCCTCCCACATCAGCCTCCTGAGCTAGGACCATGGGTGTGCATCACCATGCCTGGCAACCTGGCAATTGTAGATAAGACATGGGATGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483509.1
CDS-3UTR CAA 90 bp ATGTTCACTTCTGGGAAAAGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTTTTGCTTCCTTTGACTaGACTCGGTCCAGATCCCCC +
Preference number: 5 (lower is better)
Translates to: MFTSGKRRGCRILGDRVFFASFD*TRSRSP
Trigger: GGGGGATCTGGACCGAGTCAAGTCAAAGGAAGCAAA...AAATACCCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCCAGAAGTGAACAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp AGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTACTCAATTTCCTCATCTaGGGCCCGGAGGCTCACTAC +
Preference number: 5 (lower is better)
Translates to: RRGCRILGDRVFGMFYVLLNFLI*GPEAHY
Trigger: GTAGTGAGCCTCCGGGCCCAAGATGAGGAAATTGAG...TAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATCCTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGTTGAGCTCCCCAGTTTaGGGACCCCATGGTGTATTT +
Preference number: 5 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVLSSPV*GPHGVF
Trigger: AAATACACCATGGGGTCCCAAAACTGGGGAGCTCAA...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGAGGGAATTATACTGGTaGTCAACAGGCGAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVRELYW*STGELP
Trigger: TGGAAGCTCGCCTGTTGACAACCAGTATAATTCCCT...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGCATGGATCACCATGTTaGGCCCTTCAGATTCTTCAG +
Preference number: 5 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVHGSPC*ALQILQ
Trigger: CTGAAGAATCTGAAGGGCCAAACATGGTGATCCATG...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453873.5
CDS-3UTR CAA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGGAACAAGTCAGCCAATaGATTGTTCCCCACAATCGC +
Preference number: 5 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVEQVSQ*IVPHNR
Trigger: GCGATTGTGGGGAACAATCAATTGGCTGACTTGTTC...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACTTTGCTTCCTTTGACTaGACTCGGTCCAGATCCCCC +
Preference number: 5 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYFASFD*TRSRSP
Trigger: GGGGGATCTGGACCGAGTCAAGTCAAAGGAAGCAAA...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAATTTGCTTCCTTTGACTaGACTCGGTCCAGATCCCCC +
Preference number: 5 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKFASFD*TRSRSP
Trigger: GGGGGATCTGGACCGAGTCAAGTCAAAGGAAGCAAA...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGTCCACGACTCATCTTTaGGAACTAGGGATAGGGAAG +
Preference number: 5 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVSTTHL*ELGIGK
Trigger: CTTCCCTATCCCTAGTTCCAAAAGATGAGTCGTGGA...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CATATCTTTGTGTCTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCCATGGATCACCATGTTaGGCCCTTCAGATTCTTCAG +
Preference number: 5 (lower is better)
Translates to: HIFVSLPHDMSSSIPSPFHGSPC*ALQILQ
Trigger: CTGAAGAATCTGAAGGGCCAAACATGGTGATCCATG...GAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAGACACAAAGATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp AGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTATTGAGCTCCCCAGTTTaGGGACCCCATGGTGTATTT +
Preference number: 5 (lower is better)
Translates to: RRGCRILGDRVFGMFYVLLSSPV*GPHGVF
Trigger: AAATACACCATGGGGTCCCAAAACTGGGGAGCTCAA...TAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATCCTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTATTTGCTTCCTTTGACTaGACTCGGTCCAGATCCCCC +
Preference number: 5 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILFASFD*TRSRSP
Trigger: GGGGGATCTGGACCGAGTCAAGTCAAAGGAAGCAAA...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGGGGTTCAAACAATTCTaGTGCCTCAGCCTCCCGAGT +
Preference number: 5 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMGFKQF*CLSLPS
Trigger: ACTCGGGAGGCTGAGGCACAAGAATTGTTTGAACCC...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGGGTTCAAACAATTCTaGTGCCTCAGCCTCCCGAGT +
Preference number: 5 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHGFKQF*CLSLPS
Trigger: ACTCGGGAGGCTGAGGCACAAGAATTGTTTGAACCC...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTGGGTTCAAACAATTCTaGTGCCTCAGCCTCCCGAGT +
Preference number: 5 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPGFKQF*CLSLPS
Trigger: ACTCGGGAGGCTGAGGCACAAGAATTGTTTGAACCC...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS TCA 90 bp CTGGAGTCTCCTGAAATTCTCCATGTATGTCAAGAAGTGAGGATTTaGTATATGTGGCTAAAGTTTCAACAGGACTCTCTCCAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: LESPEILHVCQEVRI*YMWLKFQQDSLQQP
Trigger: TGGCTGCTGGAGAGAGTCCTGTTGAAACTTTAGCCACATATATCAAATCCTCACTTCTTGACATACATGGAGAATTTCAGGAGACTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295031.9
ENST00000356719.6
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000482513.5
ENST00000483700.1
ENST00000612149.1
CDS CCA 90 bp AAAGTTTCAACAGGACTCTCTCCAGCAGCCATTAGGGAATTATACTaGTTGTCAACAGGCGAGCTTCCACTGCTCTTTAATTCATCAAAC +
Preference number: 5 (lower is better)
Translates to: KVSTGLSPAAIRELY*LSTGELPLLFNSSN
Trigger: GTTTGATGAATTAAAGAGCAGTGGAAGCTCGCCTGTTGACAACCAGTATAATTCCCTAATGGCTGCTGGAGAGAGTCCTGTTGAAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295031.9
ENST00000356719.6
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000482513.5
ENST00000612149.1
CDS-3UTR CAA 90 bp ATGTTCACTTCTGGGAAAAGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTTTTTTGCACACTCTTTaGGTGTTAATCCAGGCACGA +
Preference number: 5 (lower is better)
Translates to: MFTSGKRRGCRILGDRVFFLHTL*VLIQAR
Trigger: TCGTGCCTGGATTAACACCAAAAGAGTGTGCAAAAA...AAATACCCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCCAGAAGTGAACAT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp CACTTATTCTTCTGCATACTCATAACGAAAGGAGACACATCTCTAGAAGCTGACAGGGAATTATACTGGTaGTCAACAGGCGAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: HLFFCILITKGDTSLEADRELYW*STGELP
Trigger: TGGAAGCTCGCCTGTTGACAACCAGTATAATTCCCT...GTCAGCTTCTAGAGATGTGTCTCCTTTCGTTATGAGTATGCAGAAGAATAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR CAA 90 bp AAATGTTCACTTCTGGGAAAAGAAGAGGATGCAGGATCCTCGGTGATAGGGTATCTATGTCTTCCAGTTTaGGAAACTGCATCATGTCCA +
Preference number: 5 (lower is better)
Translates to: KCSLLGKEEDAGSSVIGYLCLPV*ETASCP
Trigger: TGGACATGATGCAGTTTCCAAAACTGGAAGACATAG...ATACCCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCCAGAAGTGAACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp AAGCTGAGTAGGATCAAACCGAAGAACCTTTTGGTTACAGCAGGGATAAATTCCCCACGTCGATCCACATaGATTTTTCCAGGAATGCAA +
Preference number: 5 (lower is better)
Translates to: KLSRIKPKNLLVTAGINSPRRST*IFPGMQ
Trigger: TTGCATTCCTGGAAAAATCAATGTGGATCGACGTGG...GGAATTTATCCCTGCTGTAACCAAAAGGTTCTTCGGTTTGATCCTACTCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR CAA 90 bp CTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCATGTATTAATTCGGAACAAGTCAGCCAATaGATTGTTCCCCACAATCGC +
Preference number: 5 (lower is better)
Translates to: LCLTICQAVFQVLSCINSEQVSQ*IVPHNR
Trigger: GCGATTGTGGGGAACAATCAATTGGCTGACTTGTTC...CGAATTAATACATGAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAAGAACAAGTCAGCCAATaGATTGTTCCCCACAATCGC +
Preference number: 5 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKEQVSQ*IVPHNR
Trigger: GCGATTGTGGGGAACAATCAATTGGCTGACTTGTTC...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CACTTATTCTTCTGCATACTCATAACGAAAGGAGACACATCTCTAGAAGCTGACGAACAAGTCAGCCAATaGATTGTTCCCCACAATCGC +
Preference number: 5 (lower is better)
Translates to: HLFFCILITKGDTSLEADEQVSQ*IVPHNR
Trigger: GCGATTGTGGGGAACAATCAATTGGCTGACTTGTTC...GTCAGCTTCTAGAGATGTGTCTCCTTTCGTTATGAGTATGCAGAAGAATAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR CAA 90 bp ATATCTTTGTGTCTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCAATCTCCGCCTTCACCTaGATCACGAAGTGTAACCAT +
Preference number: 5 (lower is better)
Translates to: ISLCLCLTICQAVFQVLSISAFT*ITKCNH
Trigger: ATGGTTACACTTCGTGATCAAGGTGAAGGCGGAGAT...TGAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAGACACAAAGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAAATCTCCGCCTTCACCTaGATCACGAAGTGTAACCAT +
Preference number: 5 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKISAFT*ITKCNH
Trigger: ATGGTTACACTTCGTGATCAAGGTGAAGGCGGAGAT...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCATGTATTAATTCGGACCCCATGGTGTATTaGGCTCCAGTAAAACATCAC +
Preference number: 5 (lower is better)
Translates to: LCLTICQAVFQVLSCINSDPMVY*APVKHH
Trigger: GTGATGTTTTACTGGAGCCAAATACACCATGGGGTC...CGAATTAATACATGAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTTTGAGCTCCCCAGTTTaGGGACCCCATGGTGTATTT +
Preference number: 5 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPLSSPV*GPHGVF
Trigger: AAATACACCATGGGGTCCCAAAACTGGGGAGCTCAA...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTATTGAGCTCCCCAGTTTaGGGACCCCATGGTGTATTT +
Preference number: 5 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILLSSPV*GPHGVF
Trigger: AAATACACCATGGGGTCCCAAAACTGGGGAGCTCAA...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CATATCTTTGTGTCTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCAATGACAAGAAAGCATaGAGCTCCCCAGTTTTGGGA +
Preference number: 5 (lower is better)
Translates to: HIFVSLPHDMSSSIPSPFNDKKA*SSPVLG
Trigger: TCCCAAAACTGGGGAGCTCAATGCTTTCTTGTCATT...GAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAGACACAAAGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACAAATGACAAGAAAGCATaGAGCTCCCCAGTTTTGGGA +
Preference number: 5 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTNDKKA*SSPVLG
Trigger: TCCCAAAACTGGGGAGCTCAATGCTTTCTTGTCATT...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACACTTTGTGCATCCTGGTaGAATCTCAAGGATCTTGTG +
Preference number: 5 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTLCASW*NLKDLV
Trigger: CACAAGATCCTTGAGATTCAACCAGGATGCACAAAG...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CATATCTTTGTGTCTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCTCTCTGGGTCTCAGTTaGTCTGTTTCTTTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: HIFVSLPHDMSSSIPSPFSLGLS*SVSFAS
Trigger: GGAAGCAAAAGAAACAGACAAACTGAGACCCAGAGA...GAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAGACACAAAGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp ATGTTCACTTCTGGGAAAAGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTTGTTCTTCCATATCTTaGTGTCTCTGCCTCACGATA +
Preference number: 5 (lower is better)
Translates to: MFTSGKRRGCRILGDRVFCSSIS*CLCLTI
Trigger: TATCGTGAGGCAGAGACACAAAGATATGGAAGAACA...AAATACCCTATCACCGAGGATCCTGCATCCTCTTCTTTTCCCAGAAGTGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACACAGGGGAGAAGCAGTTaGCCTTTTTACCATCAGTTA +
Preference number: 5 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTQGRSS*PFYHQL
Trigger: TAACTGATGGTAAAAAGGCAAACTGCTTCTCCCCTG...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACCATGGATCACCATGTTaGGCCAGTTTTGGAAACTGC +
Preference number: 5 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYHGSPC*ASFGNC
Trigger: GCAGTTTCCAAAACTGGCCAAACATGGTGATCCATG...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453186.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATTCCACGACTCATCTTTaGGAACTTGTAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHSTTHL*ELVEGQ
Trigger: CTGGCCTTCTACAAGTTCCAAAAGATGAGTCGTGGA...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453186.5
CDS-3UTR CAA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATAGGGAATTATACTGGTaGTCAACAGGCGAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHRELYW*STGELP
Trigger: TGGAAGCTCGCCTGTTGACAACCAGTATAATTCCCT...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTAGGGAATTATACTGGTaGTCAACAGGCGAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPRELYW*STGELP
Trigger: TGGAAGCTCGCCTGTTGACAACCAGTATAATTCCCT...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACATGGATCACCATGTTaGGCCCTTCAGATTCTTCAG +
Preference number: 5 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILHGSPC*ALQILQ
Trigger: CTGAAGAATCTGAAGGGCCAAACATGGTGATCCATG...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453873.5
CDS-3UTR CAA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGAGCATCTATACAATGTaGCTGCATTACTCCGAGAAT +
Preference number: 5 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVSIYTM*LHYSEN
Trigger: ATTCTCGGAGTAATGCAGCAACATTGTATAGATGCT...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAACCACGTCGATCCACATaGATTTTTCCAGGAATGCAA +
Preference number: 5 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKPRRST*IFPGMQ
Trigger: TTGCATTCCTGGAAAAATCAATGTGGATCGACGTGG...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGATCTCCGCCTTCACCTaGATCACGAAGTGTAACCAT +
Preference number: 5 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMISAFT*ITKCNH
Trigger: ATGGTTACACTTCGTGATCAAGGTGAAGGCGGAGAT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGGACCCCATGGTGTATTaGGCTCCAGTAAAACATCAC +
Preference number: 5 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMDPMVY*APVKHH
Trigger: GTGATGTTTTACTGGAGCCAAATACACCATGGGGTC...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTGACCCCATGGTGTATTaGGCTCCAGTAAAACATCAC +
Preference number: 5 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPDPMVY*APVKHH
Trigger: GTGATGTTTTACTGGAGCCAAATACACCATGGGGTC...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATGACAAGAAAGCATaGAGCTCCCCAGTTTTGGGA +
Preference number: 5 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYNDKKA*SSPVLG
Trigger: TCCCAAAACTGGGGAGCTCAATGCTTTCTTGTCATT...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CACTTATTCTTCTGCATACTCATAACGAAAGGAGACACATCTCTAGAAGCTGACAATGACAAGAAAGCATaGAGCTCCCCAGTTTTGGGA +
Preference number: 5 (lower is better)
Translates to: HLFFCILITKGDTSLEADNDKKA*SSPVLG
Trigger: TCCCAAAACTGGGGAGCTCAATGCTTTCTTGTCATT...GTCAGCTTCTAGAGATGTGTCTCCTTTCGTTATGAGTATGCAGAAGAATAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR CAA 90 bp CTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCATGTATTAATTCGCTTTGTGCATCCTGGTaGAATCTCAAGGATCTTGTG +
Preference number: 5 (lower is better)
Translates to: LCLTICQAVFQVLSCINSLCASW*NLKDLV
Trigger: CACAAGATCCTTGAGATTCAACCAGGATGCACAAAG...CGAATTAATACATGAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGTCCACGACTCATCTTTaGGAACTAGGGATAGGGAAG +
Preference number: 5 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMSTTHL*ELGIGK
Trigger: CTTCCCTATCCCTAGTTCCAAAAGATGAGTCGTGGA...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CACTTATTCTTCTGCATACTCATAACGAAAGGAGACACATCTCTAGAAGCTGACTTATGCAGGACGCCCTaGACCAAAACGACTTTTAGA +
Preference number: 5 (lower is better)
Translates to: HLFFCILITKGDTSLEADLCRTP*TKTTFR
Trigger: TCTAAAAGTCGTTTTGGTCAAGGGCGTCCTGCATAA...GTCAGCTTCTAGAGATGTGTCTCCTTTCGTTATGAGTATGCAGAAGAATAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR CAA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGAGCAGTTCAAAAACCTaGGCAAAGCCAGTTATCAAA +
Preference number: 5 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVSSSKT*AKPVIK
Trigger: TTTGATAACTGGCTTTGCCAAGGTTTTTGAACTGCT...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAACAGGGGAGAAGCAGTTaGCCTTTTTACCATCAGTTA +
Preference number: 5 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKQGRSS*PFYHQL
Trigger: TAACTGATGGTAAAAAGGCAAACTGCTTCTCCCCTG...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS TCA 90 bp GTTTGGCCAGTTTTGGAAACTGCATCATGTCCAACTGGAGTCTCCTaGAATTCTCCATGTATGTCAAGAAGTGAGGATTTGATATATGTG +
Preference number: 5 (lower is better)
Translates to: VWPVLETASCPTGVS*NSPCMSRSEDLIYV
Trigger: CACATATATCAAATCCTCACTTCTTGACATACATGGAGAATTTCAGGAGACTCCAGTTGGACATGATGCAGTTTCCAAAACTGGCCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453186.5
ENST00000612149.1
CDS GCA 90 bp CAGCCATTAGGGAATTATACTGGTTGTCAACAGGCGAGCTTCCACTaGTCTTTAATTCATCAAACCTTTTTGCACACTCTTTTGGTGTTA +
Preference number: 5 (lower is better)
Translates to: QPLGNYTGCQQASFH*SLIHQTFLHTLLVL
Trigger: TAACACCAAAAGAGTGTGCAAAAAGGTTTGATGAATTAAAGAGCAGTGGAAGCTCGCCTGTTGACAACCAGTATAATTCCCTAATGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295031.9
ENST00000356719.6
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000482513.5
ENST00000612149.1
CDS CCA 90 bp GACTGTCCAAGTTTGCATCGCAGTTCTACTACTTATGGCATTATCTaGTTCAGATTAGTTAATCTCTGTGCCTCAATTTCCTCATCTTGG +
Preference number: 5 (lower is better)
Translates to: DCPSLHRSSTTYGII*FRLVNLCASISSSW
Trigger: CCAAGATGAGGAAATTGAGGCACAGAGATTAACTAATCTGAACCAGATAATGCCATAAGTAGTAGAACTGCGATGCAAACTTGGACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS CCA 90 bp GACTGTCCAAGTTTGCATCGCAGTTCTACTACTTATGGCATTATCTaGTTCAGATTAGTTAATCTCTGTGCCTCAATTTCCTCATCTCCA +
Preference number: 5 (lower is better)
Translates to: DCPSLHRSSTTYGII*FRLVNLCASISSSP
Trigger: TGGAGATGAGGAAATTGAGGCACAGAGATTAACTAATCTGAACCAGATAATGCCATAAGTAGTAGAACTGCGATGCAAACTTGGACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000482513.5
CDS-3UTR CAA 90 bp GATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTATTTCAAATCCACGACTCATCTTTaGGAACTTGTAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: DAGSSVIGYLECFMSYFKSTTHL*ELVEGQ
Trigger: CTGGCCTTCTACAAGTTCCAAAAGATGAGTCGTGGA...TTTGAAATAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp TCAGCAAAGTACTTCATTTCTGATATCAAAAGATCTCGCGGGCAAGTAAAATCTTCCACGACTCATCTTTaGGAACTTGTAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: SAKYFISDIKRSRGQVKSSTTHL*ELVEGQ
Trigger: CTGGCCTTCTACAAGTTCCAAAAGATGAGTCGTGGA...AGATTTTACTTGCCCGCGAGATCTTTTGATATCAGAAATGAAGTACTTTGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR CAA 90 bp GATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTATTTCAAAAGGGAATTATACTGGTaGTCAACAGGCGAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: DAGSSVIGYLECFMSYFKRELYW*STGELP
Trigger: TGGAAGCTCGCCTGTTGACAACCAGTATAATTCCCT...TTTGAAATAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACCTATGTCTTCCAGTTTaGGAAACTGCATCATGTCCA +
Preference number: 5 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYLCLPV*ETASCP
Trigger: TGGACATGATGCAGTTTCCAAAACTGGAAGACATAG...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453873.5
CDS-3UTR CAA 90 bp AGCTCCAAAGACATACTACAATCAGTGCCATGCATGGTAACACTACCAGTTGTGAAATCATCAACTTCATaGTGTGAGAACAGATCAGCT +
Preference number: 5 (lower is better)
Translates to: SSKDILQSVPCMVTLPVVKSSTS*CENRSA
Trigger: AGCTGATCTGTTCTCACACAATGAAGTTGATGATTT...CACAACTGGTAGTGTTACCATGCATGGCACTGATTGTAGTATGTCTTTGGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CAAATGCTACTATGTAAAAATGCTGGGTGGTGGGTACCTGGATATTTGTTGTATCCACGTCGATCCACATaGATTTTTCCAGGAATGCAA +
Preference number: 5 (lower is better)
Translates to: QMLLCKNAGWWVPGYLLYPRRST*IFPGMQ
Trigger: TTGCATTCCTGGAAAAATCAATGTGGATCGACGTGG...ATACAACAAATATCCAGGTACCCACCACCCAGCATTTTTACATAGTAGCATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGCCACGTCGATCCACATaGATTTTTCCAGGAATGCAA +
Preference number: 5 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMPRRST*IFPGMQ
Trigger: TTGCATTCCTGGAAAAATCAATGTGGATCGACGTGG...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATCCACGTCGATCCACATaGATTTTTCCAGGAATGCAA +
Preference number: 5 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHPRRST*IFPGMQ
Trigger: TTGCATTCCTGGAAAAATCAATGTGGATCGACGTGG...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTCTTTGTGCATCCTGGTaGAATCTCAAGGATCTTGTG +
Preference number: 5 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPLCASW*NLKDLV
Trigger: CACAAGATCCTTGAGATTCAACCAGGATGCACAAAG...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGCTTTGTGCATCCTGGTaGAATCTCAAGGATCTTGTG +
Preference number: 5 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMLCASW*NLKDLV
Trigger: CACAAGATCCTTGAGATTCAACCAGGATGCACAAAG...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTTTATGCAGGACGCCCTaGACCAAAACGACTTTTAGA +
Preference number: 5 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPLCRTP*TKTTFR
Trigger: TCTAAAAGTCGTTTTGGTCAAGGGCGTCCTGCATAA...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATTTATGCAGGACGCCCTaGACCAAAACGACTTTTAGA +
Preference number: 5 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHLCRTP*TKTTFR
Trigger: TCTAAAAGTCGTTTTGGTCAAGGGCGTCCTGCATAA...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTCAGGGGAGAAGCAGTTaGCCTTTTTACCATCAGTTA +
Preference number: 5 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPQGRSS*PFYHQL
Trigger: TAACTGATGGTAAAAAGGCAAACTGCTTCTCCCCTG...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAGGGGAGAAGCAGTTaGCCTTTTTACCATCAGTTA +
Preference number: 5 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILQGRSS*PFYHQL
Trigger: TAACTGATGGTAAAAAGGCAAACTGCTTCTCCCCTG...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACATGTTTGGCCAGTTTaGGAAACTGCATCATGTCCA +
Preference number: 5 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILHVWPV*ETASCP
Trigger: TGGACATGATGCAGTTTCCAAAACTGGCCAAACATG...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453186.5
ENST00000612149.1
CDS TCA 90 bp TGTCTTCCAGTTTTGGAAACTGCATCATGTCCAACTGGAGTCTCCTaGAATTCTCCATGTATGTCAAGAAGTGAGGATTTGATATATGTG +
Preference number: 5 (lower is better)
Translates to: CLPVLETASCPTGVS*NSPCMSRSEDLIYV
Trigger: CACATATATCAAATCCTCACTTCTTGACATACATGGAGAATTTCAGGAGACTCCAGTTGGACATGATGCAGTTTCCAAAACTGGAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295031.9
ENST00000356719.6
ENST00000402291.6
ENST00000453873.5
ENST00000482513.5
ENST00000483700.1
CDS-3UTR CAA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACTATGTCTTCCAGTTTaGGAAACTGCATCATGTCCA +
Preference number: 5 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILLCLPV*ETASCP
Trigger: TGGACATGATGCAGTTTCCAAAACTGGAAGACATAG...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453873.5
CDS-3UTR CAA 90 bp CGATGTAAATCTGTCCAATGTTCTTCCATATCTTTGTGTCTCTGCCTCACGATACTGAAGAACAATTCCTaGTGGAAGCTATACTATGTC +
Preference number: 5 (lower is better)
Translates to: RCKSVQCSSISLCLCLTILKNNS*WKLYYV
Trigger: GACATAGTATAGCTTCCACAAGGAATTGTTCTTCAG...TATCGTGAGGCAGAGACACAAAGATATGGAAGAACATTGGACAGATTTACATCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACCTGAAGAACAATTCCTaGTGGAAGCTATACTATGTC +
Preference number: 5 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYLKNNS*WKLYYV
Trigger: GACATAGTATAGCTTCCACAAGGAATTGTTCTTCAG...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453873.5
CDS-3UTR CAA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACACTTCTTTCAAGTTTTTaGCTTCATCACACACATGGA +
Preference number: 5 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTLLSSF*LHHTHG
Trigger: TCCATGTGTGTGATGAAGCAAAAAACTTGAAAGAAG...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCATGTATTAATTCGTTAATACAGTTCATGTaGCATGGGGTAGCTACTATG +
Preference number: 5 (lower is better)
Translates to: LCLTICQAVFQVLSCINSLIQFM*HGVATM
Trigger: CATAGTAGCTACCCCATGCAACATGAACTGTATTAA...CGAATTAATACATGAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAATTAATACAGTTCATGTaGCATGGGGTAGCTACTATG +
Preference number: 5 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKLIQFM*HGVATM
Trigger: CATAGTAGCTACCCCATGCAACATGAACTGTATTAA...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACTTAATACAGTTCATGTaGCATGGGGTAGCTACTATG +
Preference number: 5 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYLIQFM*HGVATM
Trigger: CATAGTAGCTACCCCATGCAACATGAACTGTATTAA...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp GTCACACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACAAAATCATCAACTTCATaGTGTGAGAACAGATCAGCT +
Preference number: 5 (lower is better)
Translates to: VTQPAVLNAISRFTAPKTKSSTS*CENRSA
Trigger: AGCTGATCTGTTCTCACACAATGAAGTTGATGATTT...TGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGTGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp ATATCTTTGTGTCTCTGCCTCACGATATGTCAAGCAGTATTCCAAGTCCTTTCAAGCATCTATACAATGTaGCTGCATTACTCCGAGAAT +
Preference number: 5 (lower is better)
Translates to: ISLCLCLTICQAVFQVLSSIYTM*LHYSEN
Trigger: ATTCTCGGAGTAATGCAGCAACATTGTATAGATGCT...TGAAAGGACTTGGAATACTGCTTGACATATCGTGAGGCAGAGACACAAAGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp CAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAGCATCTATACAATGTaGCTGCATTACTCCGAGAAT +
Preference number: 5 (lower is better)
Translates to: QPAVLNAISRFTAPKTYYSIYTM*LHYSEN
Trigger: ATTCTCGGAGTAATGCAGCAACATTGTATAGATGCT...GTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp AGAAGAGGATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTAAAACCGAAGAACCTTTaGGTTACAGCAGGGATAAAT +
Preference number: 5 (lower is better)
Translates to: RRGCRILGDRVFGMFYVLKPKNL*VTAGIN
Trigger: ATTTATCCCTGCTGTAACCAAAAGGTTCTTCGGTTT...TAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATCCTCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAAAAACCGAAGAACCTTTaGGTTACAGCAGGGATAAAT +
Preference number: 5 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKKPKNL*VTAGIN
Trigger: ATTTATCCCTGCTGTAACCAAAAGGTTCTTCGGTTT...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAAATGACATCTCTGTACTaGTGCAAATCGTCCAACATT +
Preference number: 5 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKMTSLY*CKSSNI
Trigger: AATGTTGGACGATTTGCACAAGTACAGAGATGTCAT...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS TCA 90 bp GAGACCACGTCTCCTTCAGATTCTTCAGTCATTTCTCCACCATTATaGGTAGTACAATTTTCACTTTCTGAAGAACAATTCCTTGTGGAA +
Preference number: 5 (lower is better)
Translates to: ETTSPSDSSVISPPL*VVQFSLSEEQFLVE
Trigger: TTCCACAAGGAATTGTTCTTCAGAAAGTGAAAATTGTACTACTCATAATGGTGGAGAAATGACTGAAGAATCTGAAGGAGACGTGGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483700.1
CDS-3UTR CAA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATCTGAAGAACAATTCCTaGTGGAAGCTATACTATGTC +
Preference number: 5 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHLKNNS*WKLYYV
Trigger: GACATAGTATAGCTTCCACAAGGAATTGTTCTTCAG...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402291.6
ENST00000453873.5
CDS-3UTR CAA 90 bp CGATGTAAATCTGTCCAATGTTCTTCCATATCTTTGTGTCTCTGCCTCACGATACTTCTTTCAAGTTTTTaGCTTCATCACACACATGGA +
Preference number: 5 (lower is better)
Translates to: RCKSVQCSSISLCLCLTILLSSF*LHHTHG
Trigger: TCCATGTGTGTGATGAAGCAAAAAACTTGAAAGAAG...TATCGTGAGGCAGAGACACAAAGATATGGAAGAACATTGGACAGATTTACATCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp GCCATGCATGGTAACACTACCAGTTGTGTTCCCCTAACTTTTAAGGTCTTAAAACTTCTTTCAAGTTTTTaGCTTCATCACACACATGGA +
Preference number: 5 (lower is better)
Translates to: AMHGNTTSCVPLTFKVLKLLSSF*LHHTHG
Trigger: TCCATGTGTGTGATGAAGCAAAAAACTTGAAAGAAG...TTTTAAGACCTTAAAAGTTAGGGGAACACAACTGGTAGTGTTACCATGCATGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CACTTATTCTTCTGCATACTCATAACGAAAGGAGACACATCTCTAGAAGCTGACCTTCTTTCAAGTTTTTaGCTTCATCACACACATGGA +
Preference number: 5 (lower is better)
Translates to: HLFFCILITKGDTSLEADLLSSF*LHHTHG
Trigger: TCCATGTGTGTGATGAAGCAAAAAACTTGAAAGAAG...GTCAGCTTCTAGAGATGTGTCTCCTTTCGTTATGAGTATGCAGAAGAATAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR CAA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATTTAATACAGTTCATGTaGCATGGGGTAGCTACTATG +
Preference number: 5 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHLIQFM*HGVATM
Trigger: CATAGTAGCTACCCCATGCAACATGAACTGTATTAA...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGTTAATACAGTTCATGTaGCATGGGGTAGCTACTATG +
Preference number: 5 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMLIQFM*HGVATM
Trigger: CATAGTAGCTACCCCATGCAACATGAACTGTATTAA...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CACTTATTCTTCTGCATACTCATAACGAAAGGAGACACATCTCTAGAAGCTGACAAATCATCAACTTCATaGTGTGAGAACAGATCAGCT +
Preference number: 5 (lower is better)
Translates to: HLFFCILITKGDTSLEADKSSTS*CENRSA
Trigger: AGCTGATCTGTTCTCACACAATGAAGTTGATGATTT...GTCAGCTTCTAGAGATGTGTCTCCTTTCGTTATGAGTATGCAGAAGAATAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR CAA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATAGCATCTATACAATGTaGCTGCATTACTCCGAGAAT +
Preference number: 5 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHSIYTM*LHYSEN
Trigger: ATTCTCGGAGTAATGCAGCAACATTGTATAGATGCT...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTAAACCGAAGAACCTTTaGGTTACAGCAGGGATAAAT +
Preference number: 5 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPKPKNL*VTAGIN
Trigger: ATTTATCCCTGCTGTAACCAAAAGGTTCTTCGGTTT...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTAAAACCGAAGAACCTTTaGGTTACAGCAGGGATAAAT +
Preference number: 5 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILKPKNL*VTAGIN
Trigger: ATTTATCCCTGCTGTAACCAAAAGGTTCTTCGGTTT...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTAATGACATCTCTGTACTaGTGCAAATCGTCCAACATT +
Preference number: 5 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILMTSLY*CKSSNI
Trigger: AATGTTGGACGATTTGCACAAGTACAGAGATGTCAT...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp CTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATATGACATCTCTGTACTaGTGCAAATCGTCCAACATT +
Preference number: 5 (lower is better)
Translates to: LNAISRFTAPKTYYNQCHMTSLY*CKSSNI
Trigger: AATGTTGGACGATTTGCACAAGTACAGAGATGTCAT...ATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp ACAACCTGCAGTTCTCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTAAGCAGTTCAAAAACCTaGGCAAAGCCAGTTATCAAA +
Preference number: 5 (lower is better)
Translates to: TTCSSQCYLKIYSSKDILSSSKT*AKPVIK
Trigger: TTTGATAACTGGCTTTGCCAAGGTTTTTGAACTGCT...TAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGAGAACTGCAGGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp TCAATGCTATCTCAAGATTTACAGCTCCAAAGACATACTACAATCAGTGCCATGAGCAGTTCAAAAACCTaGGCAAAGCCAGTTATCAAA +
Preference number: 5 (lower is better)
Translates to: SMLSQDLQLQRHTTISAMSSSKT*AKPVIK
Trigger: TTTGATAACTGGCTTTGCCAAGGTTTTTGAACTGCT...CATGGCACTGATTGTAGTATGTCTTTGGAGCTGTAAATCTTGAGATAGCATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS TCA 90 bp ACCATGTTTGGCCCTTCAGATTCTTCAGTCATTTCTCCACCATTATaGGTAGTACAATTTTCACTTTCTGAAGAACAATTCCTTGTGGAA +
Preference number: 5 (lower is better)
Translates to: TMFGPSDSSVISPPL*VVQFSLSEEQFLVE
Trigger: TTCCACAAGGAATTGTTCTTCAGAAAGTGAAAATTGTACTACTCATAATGGTGGAGAAATGACTGAAGAATCTGAAGGGCCAAACATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295031.9
ENST00000356719.6
ENST00000402291.6
ENST00000453873.5
ENST00000482513.5
CDS-3UTR CAA 90 bp CAAATGCTACTATGTAAAAATGCTGGGTGGTGGGTACCTGGATATTTGTTGTATAAATCATCAACTTCATaGTGTGAGAACAGATCAGCT +
Preference number: 5 (lower is better)
Translates to: QMLLCKNAGWWVPGYLLYKSSTS*CENRSA
Trigger: AGCTGATCTGTTCTCACACAATGAAGTTGATGATTT...ATACAACAAATATCCAGGTACCCACCACCCAGCATTTTTACATAGTAGCATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS-3UTR CAA 90 bp CACAGTACTGAAATACCTTACCCTGAAACTTCATTTAATGCAGTCTTGAGACCTAAATCATCAACTTCATaGTGTGAGAACAGATCAGCT +
Preference number: 5 (lower is better)
Translates to: HSTEIPYPETSFNAVLRPKSSTS*CENRSA
Trigger: AGCTGATCTGTTCTCACACAATGAAGTTGATGATTT...AGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGTAAGGTATTTCAGTACTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000612149.1
CDS-3UTR CAA 90 bp TCAGCAAAGTACTTCATTTCTGATATCAAAAGATCTCGCGGGCAAGTAAAATCTAGCATCTATACAATGTaGCTGCATTACTCCGAGAAT +
Preference number: 5 (lower is better)
Translates to: SAKYFISDIKRSRGQVKSSIYTM*LHYSEN
Trigger: ATTCTCGGAGTAATGCAGCAACATTGTATAGATGCT...AGATTTTACTTGCCCGCGAGATCTTTTGATATCAGAAATGAAGTACTTTGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453186.5
CDS-3UTR CAA 90 bp GATGCAGGATCCTCGGTGATAGGGTATTTGGAATGTTTTATGTCTTATTTCAAAATGACATCTCTGTACTaGTGCAAATCGTCCAACATT +
Preference number: 5 (lower is better)
Translates to: DAGSSVIGYLECFMSYFKMTSLY*CKSSNI
Trigger: AATGTTGGACGATTTGCACAAGTACAGAGATGTCAT...TTTGAAATAAGACATAAAACATTCCAAATACCCTATCACCGAGGATCCTGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295031.9
CDS TCA 72 bp TACCTGCAGTGGTCGGCACCGCCCGCGCTCGCGCCCTaGAGCTGCCGCTACCGAGCCCGCAACCCCGTCCGC +
Preference number: 6 (lower is better)
Translates to: YLQWSAPPALAP*SCRYRARNPVR
Trigger: GCGGACGGGGTTGCGGGCTCGGTAGCGGCAGCTTCAGGGCGCGAGCGCGGGCGGTGCCGACCACTGCAGGTA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402291.6
ENST00000453186.5
ENST00000482513.5
CDS CAA 90 bp AGCAACACTGTCATCAAGAGCACACTGCTCAAACCACTTTTTCTGTaGCTCTTAGACACAGTGCCGTCTCTGGGTCTCAGTTTGTCTGTT +
Preference number: 6 (lower is better)
Translates to: SNTVIKSTLLKPLFL*LLDTVPSLGLSLSV
Trigger: AACAGACAAACTGAGACCCAGAGACGGCACTGTGTCTAAGAGCAACAGAAAAAGTGGTTTGAGCAGTGTGCTCTTGATGACAGTGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295031.9
ENST00000356719.6
CDS CAA 72 bp GGACTCTCTCCAGCAGCCATTAGGGAATTATACTGGTaGTCAACAGGCGAGCTTCCACTGCTCTTTAATTCA +
Preference number: 6 (lower is better)
Translates to: GLSPAAIRELYW*STGELPLLFNS
Trigger: TGAATTAAAGAGCAGTGGAAGCTCGCCTGTTGACAACCAGTATAATTCCCTAATGGCTGCTGGAGAGAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295031.9
ENST00000356719.6
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000482513.5
ENST00000612149.1
CDS CCA 72 bp ATGCTGATTTACCTTGTGTTTTTCTCTGAGCTGCTTTaGCGTGCACTAACTGGCACTGAGGCCTTGATTTGT +
Preference number: 6 (lower is better)
Translates to: MLIYLVFFSELL*RALTGTEALIC
Trigger: ACAAATCAAGGCCTCAGTGCCAGTTAGTGCACGCCAAAGCAGCTCAGAGAAAAACACAAGGTAAATCAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488322.2
CDS CAA 90 bp GTTTCAACAGGACTCTCTCCAGCAGCCATTAGGGAATTATACTGGTaGTCAACAGGCGAGCTTCCACTGCTCTTTAATTCATCAAACCTT +
Preference number: 6 (lower is better)
Translates to: VSTGLSPAAIRELYW*STGELPLLFNSSNL
Trigger: AAGGTTTGATGAATTAAAGAGCAGTGGAAGCTCGCCTGTTGACAACCAGTATAATTCCCTAATGGCTGCTGGAGAGAGTCCTGTTGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295031.9
ENST00000356719.6
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000482513.5
ENST00000612149.1
CDS CCA 72 bp TGTTTGGCCAGTTTTGGAAACTGCATCATGTCCAACTaGAGTCTCCTGAAATTCTCCATGTATGTCAAGAAG +
Preference number: 6 (lower is better)
Translates to: CLASFGNCIMSN*SLLKFSMYVKK
Trigger: CTTCTTGACATACATGGAGAATTTCAGGAGACTCCAGTTGGACATGATGCAGTTTCCAAAACTGGCCAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453186.5
ENST00000612149.1
CDS TCA 72 bp GTTTTGGAAACTGCATCATGTCCAACTGGAGTCTCCTaGAATTCTCCATGTATGTCAAGAAGTGAGGATTTG +
Preference number: 6 (lower is better)
Translates to: VLETASCPTGVS*NSPCMSRSEDL
Trigger: CAAATCCTCACTTCTTGACATACATGGAGAATTTCAGGAGACTCCAGTTGGACATGATGCAGTTTCCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295031.9
ENST00000356719.6
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000482513.5
ENST00000483700.1
ENST00000612149.1
CDS TCA 72 bp CACGACTCATCTTTTGGAATTTATTCAAACATTTACTaGGCCATCACTGTGTGCCAGGCACTGCATCTTGTA +
Preference number: 6 (lower is better)
Translates to: HDSSFGIYSNIY*AITVCQALHLV
Trigger: TACAAGATGCAGTGCCTGGCACACAGTGATGGCTCAGTAAATGTTTGAATAAATTCCAAAAGATGAGTCGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482513.5
CDS TCA 72 bp AACAAGTCTGATAACATCTTGAACAAGTCAGCCAATTaGTTGTTCCCCACAATCGCCAGTATACATCTCTCC +
Preference number: 6 (lower is better)
Translates to: NKSDNILNKSAN*LFPTIASIHLS
Trigger: GGAGAGATGTATACTGGCGATTGTGGGGAACAATCAATTGGCTGACTTGTTCAAGATGTTATCAGACTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483509.1
CDS CCA 72 bp ATGTCTTCCAGTTTTGGAAACTGCATCATGTCCAACTaGAGTCTCCTGAAATTCTCCATGTATGTCAAGAAG +
Preference number: 6 (lower is better)
Translates to: MSSSFGNCIMSN*SLLKFSMYVKK
Trigger: CTTCTTGACATACATGGAGAATTTCAGGAGACTCCAGTTGGACATGATGCAGTTTCCAAAACTGGAAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295031.9
ENST00000356719.6
ENST00000402291.6
ENST00000453873.5
ENST00000482513.5
ENST00000483700.1
CDS TCA 72 bp CCTGAAATTCTCCATGTATGTCAAGAAGTGAGGATTTaGTATATGTGGCTAAAGTTTCAACAGGACTCTCTC +
Preference number: 6 (lower is better)
Translates to: PEILHVCQEVRI*YMWLKFQQDSL
Trigger: GAGAGAGTCCTGTTGAAACTTTAGCCACATATATCAAATCCTCACTTCTTGACATACATGGAGAATTTCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295031.9
ENST00000356719.6
ENST00000402291.6
ENST00000453186.5
ENST00000453873.5
ENST00000482513.5
ENST00000483700.1
ENST00000612149.1
CDS CCA 72 bp AGTTTGCATCGCAGTTCTACTACTTATGGCATTATCTaGTTCAGATTAGTTAATCTCTGTGCCTCAATTTCC +
Preference number: 6 (lower is better)
Translates to: SLHRSSTTYGII*FRLVNLCASIS
Trigger: GGAAATTGAGGCACAGAGATTAACTAATCTGAACCAGATAATGCCATAAGTAGTAGAACTGCGATGCAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295031.9
ENST00000402291.6
ENST00000453186.5
ENST00000482513.5
CDS TCA 72 bp GGCCCTTCAGATTCTTCAGTCATTTCTCCACCATTATaGGTAGTACAATTTTCACTTTCTGAAGAACAATTC +
Preference number: 6 (lower is better)
Translates to: GPSDSSVISPPL*VVQFSLSEEQF
Trigger: GAATTGTTCTTCAGAAAGTGAAAATTGTACTACTCATAATGGTGGAGAAATGACTGAAGAATCTGAAGGGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295031.9
ENST00000356719.6
ENST00000402291.6
ENST00000453873.5
ENST00000482513.5
CDS GCA 72 bp ACCAAGAGCATTACAAGTGCTATTTCATTTAAACCTTaGACCAACCAAATGAGACAGGCACTATTAATATCT +
Preference number: 6 (lower is better)
Translates to: TKSITSAISFKP*TNQMRQALLIS
Trigger: AGATATTAATAGTGCCTGTCTCATTTGGTTGGTGCAAGGTTTAAATGAAATAGCACTTGTAATGCTCTTGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471625.1
CDS TCA 72 bp TCTCCTTCAGATTCTTCAGTCATTTCTCCACCATTATaGGTAGTACAATTTTCACTTTCTGAAGAACAATTC +
Preference number: 6 (lower is better)
Translates to: SPSDSSVISPPL*VVQFSLSEEQF
Trigger: GAATTGTTCTTCAGAAAGTGAAAATTGTACTACTCATAATGGTGGAGAAATGACTGAAGAATCTGAAGGAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483700.1