RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIAA1549L (Homo sapiens)

Ensembl gene IDs: ENSG00000110427

Ensembl transcript IDs: ENST00000265654.6, ENST00000321505.9, ENST00000526400.6, ENST00000658780.2

Found 1634 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGTTTTGCTTGCATTGATGGGTAGGCAGCGGCTGGTGCCTCAGTaGCGTGAGGCGATGTCCTCTACCCACAGCTCTGGAAGCCAACTC +
Preference number: 1 (lower is better)
Translates to: AVLLALMGRQRLVPQ*REAMSSTHSSGSQL
Trigger: GAGTTGGCTTCCAGAGCTGTGGGTAGAGGACATCGCCTCACGGCACTGAGGCACCAGCCGCTGCCTACCCATCAATGCAAGCAAAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR GCA 90 bp CATGGACTCTGCTGCCTCACAGTGACACAAAGTCAAGGGCCTCCCTaGCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCC +
Preference number: 1 (lower is better)
Translates to: HGLCCLTVTQSQGPP*LPVGILGAETGMHP
Trigger: GGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGGAGGCCCTTGACTTTGTGTCACTGTGAGGCAGCAGAGTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 90 bp GACCCAGCGGCTGTATCAATAACTGGTGGTGGGGTGAGAAGTGGCTaGGGCAGCTCTGGCCAGTCTAGCAGAGTTTCAAGTGTGTGCACC +
Preference number: 1 (lower is better)
Translates to: DPAAVSITGGGVRSG*GSSGQSSRVSSVCT
Trigger: GGTGCACACACTTGAAACTCTGCTAGACTGGCCAGAGCTGCCCCAGCCACTTCTCACCCCACCACCAGTTATTGATACAGCCGCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 90 bp ACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTaGACCAGGAGGTTGGGACTGAATCACTGGGCCAGTCACTCCACT +
Preference number: 1 (lower is better)
Translates to: TSLQATWRDGKQAGS*TRRLGLNHWASHST
Trigger: AGTGGAGTGACTGGCCCAGTGATTCAGTCCCAACCTCCTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 90 bp ACAAAGTCAAGGGCCTCCCTGCCTGCCTGTTGGGATCCTTGGTGCTaGGACAGGAATGCACCCCCACAGTCTAGAACAGCAGTTGAGGTC +
Preference number: 1 (lower is better)
Translates to: TKSRASLPACWDPWC*DRNAPPQSRTAVEV
Trigger: GACCTCAACTGCTGTTCTAGACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGGAGGCCCTTGACTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR GCA 90 bp ATGGACCTTTACTGCACCTCCCCTGATGCAGAGCATGGACTCTGCTaGCTCACAGTGACACAAAGTCAAGGGCCTCCCTGCCTGCCTGTT +
Preference number: 1 (lower is better)
Translates to: MDLYCTSPDAEHGLC*LTVTQSQGPPCLPV
Trigger: AACAGGCAGGCAGGGAGGCCCTTGACTTTGTGTCACTGTGAGGCAGCAGAGTCCATGCTCTGCATCAGGGGAGGTGCAGTAAAGGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 90 bp GGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGAGGTTGGGACTaGATCACTGGGCCAGTCACTCCACTTCGTGGTACTTCTGCTTCC +
Preference number: 1 (lower is better)
Translates to: GEMESKQVREPGGWD*ITGPVTPLRGTSAS
Trigger: GGAAGCAGAAGTACCACGAAGTGGAGTGACTGGCCCAGTGATTCAGTCCCAACCTCCTGGTTCACGAACCTGCTTGCTTTCCATCTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR GCA 90 bp TCATTCTCCAACAGATACCAAGTAAGCCCCCAACACTGCACAGGCTaGCACACTTGGCGAGGGAACCAGAGTCCCCAATCTCCCTGCTAC +
Preference number: 1 (lower is better)
Translates to: SFSNRYQVSPQHCTG*HTWRGNQSPQSPCY
Trigger: GTAGCAGGGAGATTGGGGACTCTGGTTCCCTCGCCAAGTGTGGCAGCCTGTGCAGTGTTGGGGGCTTACTTGGTATCTGTTGGAGAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR GCA 90 bp GACAGGACCTCATTCTCCAACAGATACCAAGTAAGCCCCCAACACTaGACAGGCTGCCACACTTGGCGAGGGAACCAGAGTCCCCAATCT +
Preference number: 1 (lower is better)
Translates to: DRTSFSNRYQVSPQH*TGCHTWRGNQSPQS
Trigger: AGATTGGGGACTCTGGTTCCCTCGCCAAGTGTGGCAGCCTGTGCAGTGTTGGGGGCTTACTTGGTATCTGTTGGAGAATGAGGTCCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 90 bp GGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCTTGTaGGGCAGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCT +
Preference number: 1 (lower is better)
Translates to: GKVRTQGVHTDSWPL*GRIERTTEGQSPVA
Trigger: AGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
3UTR CCA 90 bp AACAGATACCAAGTAAGCCCCCAACACTGCACAGGCTGCCACACTTaGCGAGGGAACCAGAGTCCCCAATCTCCCTGCTACACAAAGTCA +
Preference number: 1 (lower is better)
Translates to: NRYQVSPQHCTGCHT*RGNQSPQSPCYTKS
Trigger: TGACTTTGTGTAGCAGGGAGATTGGGGACTCTGGTTCCCTCGCCAAGTGTGGCAGCCTGTGCAGTGTTGGGGGCTTACTTGGTATCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR GCA 90 bp ACCCACAGCTCTGGAAGCCAACTCACCATGCCAGGGAGGGCAACTTaGAACATCATGGTCACAAAGTGGCCACCCTACCATTTCAGCAAA +
Preference number: 1 (lower is better)
Translates to: THSSGSQLTMPGRAT*NIMVTKWPPYHFSK
Trigger: TTTGCTGAAATGGTAGGGTGGCCACTTTGTGACCATGATGTTGCAAGTTGCCCTCCCTGGCATGGTGAGTTGGCTTCCAGAGCTGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 90 bp ACCAGGAGGTTGGGACTGAATCACTGGGCCAGTCACTCCACTTCGTaGTACTTCTGCTTCCTCCTCCAAGGTCAACCAAGGTCCTTTTGT +
Preference number: 1 (lower is better)
Translates to: TRRLGLNHWASHSTS*YFCFLLQGQPRSFC
Trigger: ACAAAAGGACCTTGGTTGACCTTGGAGGAGGAAGCAGAAGTACCACGAAGTGGAGTGACTGGCCCAGTGATTCAGTCCCAACCTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR GCA 90 bp TTGGGACTGAATCACTGGGCCAGTCACTCCACTTCGTGGTACTTCTaGTTCCTCCTCCAAGGTCAACCAAGGTCCTTTTGTGGCTTCTGT +
Preference number: 1 (lower is better)
Translates to: LGLNHWASHSTSWYF*FLLQGQPRSFCGFC
Trigger: ACAGAAGCCACAAAAGGACCTTGGTTGACCTTGGAGGAGGAAGCAGAAGTACCACGAAGTGGAGTGACTGGCCCAGTGATTCAGTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 90 bp ATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTaGTGCAGAGCATGGACTCTGCTGCCTCACAGTGACACAAAGTCA +
Preference number: 1 (lower is better)
Translates to: IIGLKPHNGPLLHLP*CRAWTLLPHSDTKS
Trigger: TGACTTTGTGTCACTGTGAGGCAGCAGAGTCCATGCTCTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 90 bp CATCCCAGGAGTACTAGTCAGTTCCAGTGTGTAGTAGGTTCTTTTTaGAGGTCTTGCCCACTCATGCTCCTTCTTCTGGGTACCAGCCCC +
Preference number: 1 (lower is better)
Translates to: HPRSTSQFQCVVGSF*RSCPLMLLLLGTSP
Trigger: GGGGCTGGTACCCAGAAGAAGGAGCATGAGTGGGCAAGACCTTCAAAAAGAACCTACTACACACTGGAACTGACTAGTACTCCTGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 90 bp AGCTCTGGCCAGTCTAGCAGAGTTTCAAGTGTGTGCACCCTCACCTaGTGTGCAAGTGAAGATGCCCCTTTTCTCTGTGTGGTAGTATCC +
Preference number: 1 (lower is better)
Translates to: SSGQSSRVSSVCTLT*CASEDAPFLCVVVS
Trigger: GGATACTACCACACAGAGAAAAGGGGCATCTTCACTTGCACATCAGGTGAGGGTGCACACACTTGAAACTCTGCTAGACTGGCCAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 90 bp CTGGAAGCCAACTCACCATGCCAGGGAGGGCAACTTGCAACATCATaGTCACAAAGTGGCCACCCTACCATTTCAGCAAATGTCTTCCTA +
Preference number: 1 (lower is better)
Translates to: LEANSPCQGGQLATS*SQSGHPTISANVFL
Trigger: TAGGAAGACATTTGCTGAAATGGTAGGGTGGCCACTTTGTGACCATGATGTTGCAAGTTGCCCTCCCTGGCATGGTGAGTTGGCTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 90 bp CTAAAGAAATGTGTTACTGACAAGCCTGCAGGCCACATGGCGAGATaGAAAGCAAGCAGGTTCGTGAACCAGGAGGTTGGGACTGAATCA +
Preference number: 1 (lower is better)
Translates to: LKKCVTDKPAGHMAR*KASRFVNQEVGTES
Trigger: TGATTCAGTCCCAACCTCCTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTCAGTAACACATTTCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 90 bp CTCACCATGCCAGGGAGGGCAACTTGCAACATCATGGTCACAAAGTaGCCACCCTACCATTTCAGCAAATGTCTTCCTATGTCCATTAAC +
Preference number: 1 (lower is better)
Translates to: LTMPGRATCNIMVTK*PPYHFSKCLPMSIN
Trigger: GTTAATGGACATAGGAAGACATTTGCTGAAATGGTAGGGTGGCCACTTTGTGACCATGATGTTGCAAGTTGCCCTCCCTGGCATGGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 90 bp TCTTATTATGCACAAGCCTCAGATCATAGGTCTCAAGCCACACAATaGACCTTTACTGCACCTCCCCTGATGCAGAGCATGGACTCTGCT +
Preference number: 1 (lower is better)
Translates to: SYYAQASDHRSQATQ*TFTAPPLMQSMDSA
Trigger: AGCAGAGTCCATGCTCTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATCTGAGGCTTGTGCATAATAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR GCA 90 bp GTTGTGTGGAGTGGGTTCTTGAGGGGTGGATTTTTCAGCTACATATaGACTAATGAGAAAGCTGGTTGGCCAGGAGAAGCAAGAGAACCA +
Preference number: 1 (lower is better)
Translates to: VVWSGFLRGGFFSYI*TNEKAGWPGEAREP
Trigger: TGGTTCTCTTGCTTCTCCTGGCCAACCAGCTTTCTCATTAGTGCATATGTAGCTGAAAAATCCACCCCTCAAGAACCCACTCCACACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 90 bp GATGGGCTCAGAAGAAAATGGATACAGCTGAAGCTAGATGGGTCATaGGTGAAAGCAGGACAGGACCTCATTCTCCAACAGATACCAAGT +
Preference number: 1 (lower is better)
Translates to: DGLRRKWIQLKLDGS*VKAGQDLILQQIPS
Trigger: ACTTGGTATCTGTTGGAGAATGAGGTCCTGTCCTGCTTTCACCCATGACCCATCTAGCTTCAGCTGTATCCATTTTCTTCTGAGCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 90 bp AATGGAAGATGGGCTCAGAAGAAAATGGATACAGCTGAAGCTAGATaGGTCATGGGTGAAAGCAGGACAGGACCTCATTCTCCAACAGAT +
Preference number: 1 (lower is better)
Translates to: NGRWAQKKMDTAEAR*VMGESRTGPHSPTD
Trigger: ATCTGTTGGAGAATGAGGTCCTGTCCTGCTTTCACCCATGACCCATCTAGCTTCAGCTGTATCCATTTTCTTCTGAGCCCATCTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 90 bp TCTGTAAAGACCACAGTGATTTGTGACTCCACCCTCTTAGCACTCTaGAGCCATAGCTCTGCAAACTGTAGACTCAGTCTCTGTAAGTCA +
Preference number: 1 (lower is better)
Translates to: SVKTTVICDSTLLAL*SHSSANCRLSLCKS
Trigger: TGACTTACAGAGACTGAGTCTACAGTTTGCAGAGCTATGGCTCCAGAGTGCTAAGAGGGTGGAGTCACAAATCACTGTGGTCTTTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 90 bp CATGCTATCTTTTTAGTCGTCTCAGTTGACTCACTCAGTATTTCCTaGGGCTCTGTAAAGACCACAGTGATTTGTGACTCCACCCTCTTA +
Preference number: 1 (lower is better)
Translates to: HAIFLVVSVDSLSIS*GSVKTTVICDSTLL
Trigger: TAAGAGGGTGGAGTCACAAATCACTGTGGTCTTTACAGAGCCCCAGGAAATACTGAGTGAGTCAACTGAGACGACTAAAAAGATAGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 90 bp TGTCTCCCTTACAAACTGATTTTAATGCGCACGGTCATGGTTGAATaGGAATACAGTCTGGTGCTTAATCCACACTCCTGCATTGCCTTT +
Preference number: 1 (lower is better)
Translates to: CLPYKLILMRTVMVE*EYSLVLNPHSCIAF
Trigger: AAAGGCAATGCAGGAGTGTGGATTAAGCACCAGACTGTATTCTCATTCAACCATGACCGTGCGCATTAAAATCAGTTTGTAAGGGAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 90 bp ATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTaGTTTATTAAAATGTGGCATTGGATAGGAATCTGTAGATTAGCT +
Preference number: 1 (lower is better)
Translates to: MQRSPKIRATFSRFR*FIKMWHWIGICRLA
Trigger: AGCTAATCTACAGATTCCTATCCAATGCCACATTTTAATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 90 bp CACTACCTATTATCATCCGAACAAGAGACTTGTTTGAAGGTTCCATaGCACATCATCTCTGAACATTCCAGAAAGGGCAGTTTGCCATTG +
Preference number: 1 (lower is better)
Translates to: HYLLSSEQETCLKVP*HIISEHSRKGSLPL
Trigger: CAATGGCAAACTGCCCTTTCTGGAATGTTCAGAGATGATGTGTCATGGAACCTTCAAACAAGTCTCTTGTTCGGATGATAATAGGTAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 90 bp ATGAACAGGCTGAGTTTCTTTGGCTCTTTGTTCATTCAAGTGCATTaGATGCCTATGTGGATAGACGTAGGCATTGTGTTAACCTGTCAA +
Preference number: 1 (lower is better)
Translates to: MNRLSFFGSLFIQVH*MPMWIDVGIVLTCQ
Trigger: TTGACAGGTTAACACAATGCCTACGTCTATCCACATAGGCATTCAATGCACTTGAATGAACAAAGAGCCAAAGAAACTCAGCCTGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 90 bp AAGACAGTATCTGATTTAGCATGCTATCTTTTTAGTCGTCTCAGTTaGCTCACTCAGTATTTCCTGGGGCTCTGTAAAGACCACAGTGAT +
Preference number: 1 (lower is better)
Translates to: KTVSDLACYLFSRLS*LTQYFLGLCKDHSD
Trigger: ATCACTGTGGTCTTTACAGAGCCCCAGGAAATACTGAGTGAGTCAACTGAGACGACTAAAAAGATAGCATGCTAAATCAGATACTGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTTGGGTAGGCAGCGGCTaGTGCCTCAGTGCCGTGAGG +
Preference number: 2 (lower is better)
Translates to: PCLPVGILGAETGMHPHSWVGSG*CLSAVR
Trigger: CCTCACGGCACTGAGGCACCAGCCGCTGCCTACCCA...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGGTGCCTCAGTGCCGTaGGGCGATGTCCTCTACCCA +
Preference number: 2 (lower is better)
Translates to: DKPAGHMARWKASRFVNQGASVP*GDVLYP
Trigger: TGGGTAGAGGACATCGCCTCACGGCACTGAGGCACC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGGTGCCTCAGTGCCGTaGGGCGATGTCCTCTACCCA +
Preference number: 2 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCGASVP*GDVLYP
Trigger: TGGGTAGAGGACATCGCCTCACGGCACTGAGGCACC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGACAGGCTGCCACACTTaGCGAGGGAACCAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: DKPAGHMARWKASRFVNQTGCHT*RGNQSP
Trigger: GGGACTCTGGTTCCCTCGCCAAGTGTGGCAGCCTGT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTAGCCTGCAGGCCACATaGCGAGATGGAAAGCAAGCA +
Preference number: 2 (lower is better)
Translates to: PCLPVGILGAETGMHPHSSLQAT*RDGKQA
Trigger: TGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCT...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGTAGGCAGCGGCTGGTaGCTCAGTGCCGTGAGGCGA +
Preference number: 2 (lower is better)
Translates to: RDHISLTENLTRVALSPHVGSGW*LSAVRR
Trigger: TCGCCTCACGGCACTGAGGCACCAGCCGCTGCCTAC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGACCACAGTGATTTGTaGCTCCACCCTCTTAGCACT +
Preference number: 2 (lower is better)
Translates to: PCLPVGILGAETGMHPHSDHSDL*LHPLST
Trigger: AGTGCTAAGAGGGTGGAGTCACAAATCACTGTGGTC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CAA 90 bp CAACAGATACCAAGTAAGCCCCCAACACTGCACAGGCTGCCACACTaGGCGAGGGAACCAGAGTCCCCAATCTCCCTGCTACACAAAGTC +
Preference number: 2 (lower is better)
Translates to: QQIPSKPPTLHRLPH*AREPESPISLLHKV
Trigger: GACTTTGTGTAGCAGGGAGATTGGGGACTCTGGTTCCCTCGCCAAGTGTGGCAGCCTGTGCAGTGTTGGGGGCTTACTTGGTATCTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGTGTTTGTTCATTGCTaGCTCCTCAGGGCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: DKPAGHMARWKASRFVNQVFVHC*LLRALW
Trigger: CCAGAGAGCCCTGAGGAGGCAGCAATGAACAAACAC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp CATACAGACTCCTGGCCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGGCTGGGGGTGGTTCTTaGAGGGAAGGCTTCTCACCA +
Preference number: 2 (lower is better)
Translates to: HTDSWPLWGRIERTTEGQAGGGS*REGFSP
Trigger: TGGTGAGAAGCCTTCCCTCCAAGAACCACCCCCAGC...CTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
3UTR-3UTR CCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTCTCCTCAGGGCTCTCTaGGAACCTTATTTCAATTCC +
Preference number: 2 (lower is better)
Translates to: PCLPVGILGAETGMHPHSLLRAL*EPYFNS
Trigger: GGAATTGAAATAAGGTTCCCAGAGAGCCCTGAGGAG...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CAA 90 bp AACCAGAGTCCCCAATCTCCCTGCTACACAAAGTCAGTAGCTGTTTaGCTTGCATTGATGGGTAGGCAGCGGCTGGTGCCTCAGTGCCGT +
Preference number: 2 (lower is better)
Translates to: NQSPQSPCYTKSVAV*LALMGRQRLVPQCR
Trigger: ACGGCACTGAGGCACCAGCCGCTGCCTACCCATCAATGCAAGCAAAACAGCTACTGACTTTGTGTAGCAGGGAGATTGGGGACTCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCCAGGGAGGGCAACTTaGAACATCATGGTCACAAAG +
Preference number: 2 (lower is better)
Translates to: DKPAGHMARWKASRFVNQPGRAT*NIMVTK
Trigger: CTTTGTGACCATGATGTTGCAAGTTGCCCTCCCTGG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCAACACTGCACAGGCTaGCACACTTGGCGAGGGAAC +
Preference number: 2 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQQHCTG*HTWRGN
Trigger: GTTCCCTCGCCAAGTGTGGCAGCCTGTGCAGTGTTG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGGGGAGCAGCTGGGGGTaGTTCTTGGAGGGAAGGCTT +
Preference number: 2 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVGSSWG*FLEGRL
Trigger: AAGCCTTCCCTCCAAGAACCACCCCCAGCTGCTCCC...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
3UTR-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGAGTCACTCCACTTCGTaGTACTTCTGCTTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: DKPAGHMARWKASRFVNQSHSTS*YFCFLL
Trigger: GAGGAGGAAGCAGAAGTACCACGAAGTGGAGTGACT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CAA 90 bp TACCCACAGCTCTGGAAGCCAACTCACCATGCCAGGGAGGGCAACTaGCAACATCATGGTCACAAAGTGGCCACCCTACCATTTCAGCAA +
Preference number: 2 (lower is better)
Translates to: YPQLWKPTHHAREGN*QHHGHKVATLPFQQ
Trigger: TTGCTGAAATGGTAGGGTGGCCACTTTGTGACCATGATGTTGCAAGTTGCCCTCCCTGGCATGGTGAGTTGGCTTCCAGAGCTGTGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTTTCTCCCGCTTCCGGTaGTTTATTAAAATGTGGCAT +
Preference number: 2 (lower is better)
Translates to: PCLPVGILGAETGMHPHSFSRFR*FIKMWH
Trigger: ATGCCACATTTTAATAAATCACCGGAAGCGGGAGAA...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCTGTTTTGCTTGCATTaGTGGGTAGGCAGCGGCTGG +
Preference number: 2 (lower is better)
Translates to: RDHISLTENLTRVALSPHLFCLH*WVGSGW
Trigger: CCAGCCGCTGCCTACCCATCAATGCAAGCAAAACAG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCACTCACAGAAAATCTaGCCAGAGTGGCTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCHSQKI*PEWLCL
Trigger: GAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTACAATGGACCTTTACTaGACCTCCCCTGATGCAGAG +
Preference number: 2 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCTMDLY*TSPDAE
Trigger: CTCTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGT...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGACAGAGGCTGCGGCCTaGGAAGACTGTGGTTCTACC +
Preference number: 2 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVTEAAA*EDCGST
Trigger: GGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTACCCTCTTAGCACTCTaGAGCCATAGCTCTGCAAAC +
Preference number: 2 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCTLLAL*SHSSAN
Trigger: GTTTGCAGAGCTATGGCTCCAGAGTGCTAAGAGGGT...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGGCCACATGGCGAGATaGAAAGCAAGCAGGTTCGTG +
Preference number: 2 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQGHMAR*KASRFV
Trigger: CACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGACGGTCATGGTTGAATaGGAATACAGTCTGGTGCTT +
Preference number: 2 (lower is better)
Translates to: DKPAGHMARWKASRFVNQTVMVE*EYSLVL
Trigger: AAGCACCAGACTGTATTCTCATTCAACCATGACCGT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTTGTTTGAAGGTTCCATaGCACATCATCTCTGAACAT +
Preference number: 2 (lower is better)
Translates to: PCLPVGILGAETGMHPHSCLKVP*HIISEH
Trigger: ATGTTCAGAGATGATGTGTCATGGAACCTTCAAACA...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTTTCATTCAAGTGCATTaGATGCCTATGTGGATAGAC +
Preference number: 2 (lower is better)
Translates to: PCLPVGILGAETGMHPHSFIQVH*MPMWID
Trigger: GTCTATCCACATAGGCATTCAATGCACTTGAATGAA...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCTCAGCAGCACACACTaGACATCATTGTTGAAGAGA +
Preference number: 2 (lower is better)
Translates to: DKPAGHMARWKASRFVNQLSSTH*TSLLKR
Trigger: TCTCTTCAACAATGATGTCCAGTGTGTGCTGCTGAG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGGCCTGGGAAGACTGTaGTTCTACCACTCCTGTTTC +
Preference number: 2 (lower is better)
Translates to: RDHISLTENLTRVALSPHGLGRL*FYHSCF
Trigger: GAAACAGGAGTGGTAGAACCACAGTCTTCCCAGGCC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGAGCCTGCAGGCCACATaGCGAGATGGAAAGCAAGCA +
Preference number: 2 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVSLQAT*RDGKQA
Trigger: TGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTACTGGACATCATTGTTaGAGAGACAGAGATTTTCTT +
Preference number: 2 (lower is better)
Translates to: PCLPVGILGAETGMHPHSTGHHC*RDRDFL
Trigger: AAGAAAATCTCTGTCTCTTCAACAATGATGTCCAGT...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp CCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTCCTTTGTCACTTTCTaGTGTGCCATTACATTCTGG +
Preference number: 2 (lower is better)
Translates to: PLWGRIERTTEGQSPVAVSFVTF*CAITFW
Trigger: CCAGAATGTAATGGCACAGCAGAAAGTGACAAAGGA...CACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
3UTR-3UTR GCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACGGCTGGTGCCTCAGTaGCGTGAGGCGATGTCCTCT +
Preference number: 2 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTRLVPQ*REAMSS
Trigger: AGAGGACATCGCCTCACGGCACTGAGGCACCAGCCG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGAGGGTGTTTGTTCATTaGTGCCTCCTCAGGGCTCTC +
Preference number: 2 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVRVFVH*CLLRAL
Trigger: GAGAGCCCTGAGGAGGCAGCAATGAACAAACACCCT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGGACTGCTCTCCGAGTaGTGGCTGCTGCGTGGCATG +
Preference number: 2 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTGLLSE*WLLRGM
Trigger: CATGCCACGCAGCAGCCAGCACTCGGAGAGCAGTCC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACTGCTCTCCGAGTGCTaGCTGCTGCGTGGCATGGCA +
Preference number: 2 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTLLSEC*LLRGMA
Trigger: TGCCATGCCACGCAGCAGCCAGCACTCGGAGAGCAG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGCAGGGGCGGAGGAAGTaGGACAGGACAATTCAGACA +
Preference number: 2 (lower is better)
Translates to: EQLFQRSAALVELVQEIAQGRRK*DRTIQT
Trigger: TGTCTGAATTGTCCTGTCTCACTTCCTCCGCCCCTG...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
3UTR-3UTR TCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGCCACAATCAGTTGGATaGGCCAAGAATCTAGTCGTT +
Preference number: 2 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLPQSVG*AKNLVV
Trigger: AACGACTAGATTCTTGGCTCATCCAACTGATTGTGG...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTTTAGTCGTCTCAGTTaGCTCACTCAGTATTTCCTG +
Preference number: 2 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCFSRLS*LTQYFL
Trigger: CAGGAAATACTGAGTGAGTCAACTGAGACGACTAAA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAGTCCCCAATCTCCCTaGTACACAAAGTCAGTAGCT +
Preference number: 2 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQSPQSP*YTKSVA
Trigger: AGCTACTGACTTTGTGTAGCAGGGAGATTGGGGACT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGTATCTGATTTAGCATaGTATCTTTTTAGTCGTCTC +
Preference number: 2 (lower is better)
Translates to: PCLPVGILGAETGMHPHSVSDLA*YLFSRL
Trigger: GAGACGACTAAAAAGATAGCATGCTAAATCAGATAC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGACTTCGTGGTACTTCTaGTTCCTCCTCCAAGGTCAA +
Preference number: 2 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQTSWYF*FLLQGQ
Trigger: TTGACCTTGGAGGAGGAAGCAGAAGTACCACGAAGT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAAGCGTCTCCCTGAGCTaGGCTTCCCTGATTCGTTGC +
Preference number: 2 (lower is better)
Translates to: QLFQRSAALVELVQEIASSVSLS*ASLIRC
Trigger: GCAACGAATCAGGGAAGCCCAGCTCAGGGAGACGCT...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
3UTR-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATATCATGGTCACAAAGTaGCCACCCTACCATTTCAGC +
Preference number: 2 (lower is better)
Translates to: RDHISLTENLTRVALSPHIMVTK*PPYHFS
Trigger: GCTGAAATGGTAGGGTGGCCACTTTGTGACCATGAT...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCAACTTGCAACATCATaGTCACAAAGTGGCCACCCT +
Preference number: 2 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQQLATS*SQSGHP
Trigger: AGGGTGGCCACTTTGTGACCATGATGTTGCAAGTTG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATACAGGCTGCCACACTTaGCGAGGGAACCAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDTGCHT*RGNQSP
Trigger: GGGACTCTGGTTCCCTCGCCAAGTGTGGCAGCCTGT...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGAAAAGTCTGTGCATTaGCAGTTTGAACCTCCCCTT +
Preference number: 2 (lower is better)
Translates to: RDHISLTENLTRVALSPHEKSVH*QFEPPL
Trigger: AAGGGGAGGTTCAAACTGTCAATGCACAGACTTTTC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATATGACACATCATCTCTaGACATTCCAGAAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: RDHISLTENLTRVALSPHMTHHL*TFQKGQ
Trigger: CTGCCCTTTCTGGAATGTTCAGAGATGATGTGTCAT...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTGTTTGAAGGTTCCATaGCACATCATCTCTGAACAT +
Preference number: 2 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCCLKVP*HIISEH
Trigger: ATGTTCAGAGATGATGTGTCATGGAACCTTCAAACA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCAGTGTTTTGCAAACTaGTTTAGGTTTTGGACTACA +
Preference number: 2 (lower is better)
Translates to: DKPAGHMARWKASRFVNQQCFAN*FRFWTT
Trigger: TGTAGTCCAAAACCTAAATCAGTTTGCAAAACACTG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCCAGGAGGTTGGGACTaGATCACTGGGCCAGTCACT +
Preference number: 2 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDPGGWD*ITGPVT
Trigger: AGTGACTGGCCCAGTGATTCAGTCCCAACCTCCTGG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAAAGAAATGTGTTACTaGCAAGCCTGCAGGCCACAT +
Preference number: 2 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQKEMCY*QACRPH
Trigger: ATGTGGCCTGCAGGCTTGTCAGTAACACATTTCTTT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGTAAGCCCCCAACACTaGACAGGCTGCCACACTTGG +
Preference number: 2 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDVSPQH*TGCHTW
Trigger: CCAAGTGTGGCAGCCTGTGCAGTGTTGGGGGCTTAC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGGGGCTCAGGTTTCTTaGCTGGAGTCAGTGTCTCCC +
Preference number: 2 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDGAQVS*LESVSP
Trigger: GGGAGACACTGACTCCAGCCAAGAAACCTGAGCCCC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCTCAGCAGCACACACTaGACATCATTGTTGAAGAGA +
Preference number: 2 (lower is better)
Translates to: RDHISLTENLTRVALSPHLSSTH*TSLLKR
Trigger: TCTCTTCAACAATGATGTCCAGTGTGTGCTGCTGAG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTCACTCAGTATTTCCTaGGGCTCTGTAAAGACCACA +
Preference number: 2 (lower is better)
Translates to: RDHISLTENLTRVALSPHSLSIS*GSVKTT
Trigger: TGTGGTCTTTACAGAGCCCCAGGAAATACTGAGTGA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGCTGTCTCCCCATGAGTaGGATAACATGAACAGACTG +
Preference number: 2 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVLSPHE*DNMNRL
Trigger: CAGTCTGTTCATGTTATCCCACTCATGGGGAGACAG...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAAATAGAAAGAACGACTaGGGGTCAGAGCCCAGTGGC +
Preference number: 2 (lower is better)
Translates to: QLFQRSAALVELVQEIASNRKND*GSEPSG
Trigger: GCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATT...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
3UTR-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTTCAGAAATGGAGGGTaGGAAAGACTCACCCATTGC +
Preference number: 2 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYFRNGG*ERLTHC
Trigger: GCAATGGGTGAGTCTTTCTCACCCTCCATTTCTGAA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCACAGCCATTGGTACTaGCTTTCATCCAGTTCATTT +
Preference number: 2 (lower is better)
Translates to: RDHISLTENLTRVALSPHHSHWY*LSSSSF
Trigger: AAATGAACTGGATGAAAGTCAGTACCAATGGCTGTG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACTGTTTTGCTTGCATTaGTGGGTAGGCAGCGGCTGG +
Preference number: 2 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTLFCLH*WVGSGW
Trigger: CCAGCCGCTGCCTACCCATCAATGCAAGCAAAACAG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAAGCAAGCAGGTTCGTaGACCAGGAGGTTGGGACTG +
Preference number: 2 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFKQAGS*TRRLGL
Trigger: CAGTCCCAACCTCCTGGTTCACGAACCTGCTTGCTT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGATTGGACAGGCACCTaGCCCCAGGGTGGCTCACCC +
Preference number: 2 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQDWTGT*PQGGSP
Trigger: GGGTGAGCCACCCTGGGGTCAGGTGCCTGTCCAATC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGTGTGCACCCTCACCTaGTGTGCAAGTGAAGATGCC +
Preference number: 2 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDVCTLT*CASEDA
Trigger: GGCATCTTCACTTGCACATCAGGTGAGGGTGCACAC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGCTTAATCCACACTCCTaGATTGCCTTTAACACAGAA +
Preference number: 2 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLLNPHS*IAFNTE
Trigger: TTCTGTGTTAAAGGCAATGCAGGAGTGTGGATTAAG...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGTAGGCAGCGGCTGGTaGCTCAGTGCCGTGAGGCGA +
Preference number: 2 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQVGSGW*LSAVRR
Trigger: TCGCCTCACGGCACTGAGGCACCAGCCGCTGCCTAC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTCTTTGAAAAGTCTGTaGATTGACAGTTTGAACCTC +
Preference number: 2 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCSLKSL*IDSLNL
Trigger: GAGGTTCAAACTGTCAATGCACAGACTTTTCAAAGA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGAAAGAGGAAACTCCTTaGTCTGTAGGTAACAGCTGC +
Preference number: 2 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVKEETP*SVGNSC
Trigger: GCAGCTGTTACCTACAGAGCAAGGAGTTTCCTCTTT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGAGGACAATGGAAGATaGGCTCAGAAGAAAATGGAT +
Preference number: 2 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQEDNGR*AQKKMD
Trigger: ATCCATTTTCTTCTGAGCCCATCTTCCATTGTCCTC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGCACAGCCATTGGTACTaGCTTTCATCCAGTTCATTT +
Preference number: 2 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVHSHWY*LSSSSF
Trigger: AAATGAACTGGATGAAAGTCAGTACCAATGGCTGTG...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGACTGGACATCATTGTTaGAGAGACAGAGATTTTCTT +
Preference number: 2 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLTGHHC*RDRDFL
Trigger: AAGAAAATCTCTGTCTCTTCAACAATGATGTCCAGT...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAACAAGAGACTTGTTTaGAGGTTCCATGACACATCA +
Preference number: 2 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQNKRLV*RFHDTS
Trigger: TGATGTGTCATGGAACCTTCAAACAAGTCTCTTGTT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGAAAGACTCACCCATTaGTATGTCTCAAGTCCTAAC +
Preference number: 2 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVERLTH*YVSSPN
Trigger: GTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCTTAATCCACACTCCTaGATTGCCTTTAACACAGAA +
Preference number: 2 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQLNPHS*IAFNTE
Trigger: TTCTGTGTTAAAGGCAATGCAGGAGTGTGGATTAAG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGCAGAGCATGGACTCTaGTGCCTCACAGTGACACAA +
Preference number: 2 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDAEHGL*CLTVTQ
Trigger: TTGTGTCACTGTGAGGCAGCAGAGTCCATGCTCTGC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTCTCCGAGTGCTGGCTaGTGCGTGGCATGGCATCCC +
Preference number: 2 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQSPSAG*CVAWHP
Trigger: GGGATGCCATGCCACGCAGCAGCCAGCACTCGGAGA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAATGAGAATACAGTCTaGTGCTTAATCCACACTCCT +
Preference number: 2 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQNENTV*CLIHTP
Trigger: AGGAGTGTGGATTAAGCACCAGACTGTATTCTCATT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTTGGGACTGAATCACTaGGCCAGTCACTCCACTTCG +
Preference number: 2 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFLGLNH*ASHSTS
Trigger: CGAAGTGGAGTGACTGGCCCAGTGATTCAGTCCCAA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATTGGGACTGAATCACTaGGCCAGTCACTCCACTTCG +
Preference number: 2 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTLGLNH*ASHSTS
Trigger: CGAAGTGGAGTGACTGGCCCAGTGATTCAGTCCCAA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CAA 90 bp TTCTGTGACTATCTAGAGGGTTCTGATGAACAGGGTGTTTGTTCATaGCTGCCTCCTCAGGGCTCTCTGGGAACCTTATTTCAATTCCTT +
Preference number: 2 (lower is better)
Translates to: FCDYLEGSDEQGVCS*LPPQGSLGTLFQFL
Trigger: AAGGAATTGAAATAAGGTTCCCAGAGAGCCCTGAGGAGGCAGCAATGAACAAACACCCTGTTCATCAGAACCCTCTAGATAGTCACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGCGCACGGTCATGGTTaGATGAGAATACAGTCTGGT +
Preference number: 2 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFAHGHG*MRIQSG
Trigger: ACCAGACTGTATTCTCATTCAACCATGACCGTGCGC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGACCACAGTGATTTGTaGCTCCACCCTCTTAGCACT +
Preference number: 2 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFDHSDL*LHPLST
Trigger: AGTGCTAAGAGGGTGGAGTCACAAATCACTGTGGTC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCCAGGGAGGGCAACTTaGAACATCATGGTCACAAAG +
Preference number: 2 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDPGRAT*NIMVTK
Trigger: CTTTGTGACCATGATGTTGCAAGTTGCCCTCCCTGG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCTTTGTTCATTCAAGTaGATTGAATGCCTATGTGGA +
Preference number: 2 (lower is better)
Translates to: RDHISLTENLTRVALSPHLCSFK*IECLCG
Trigger: TCCACATAGGCATTCAATGCACTTGAATGAACAAAG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACTCAGGTTTCTTGGCTaGAGTCAGTGTCTCCCTTAC +
Preference number: 2 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTLRFLG*SQCLPY
Trigger: GTAAGGGAGACACTGACTCCAGCCAAGAAACCTGAG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAACAGCTGAAGCTAGATaGGTCATGGGTGAAAGCAGG +
Preference number: 2 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTTAEAR*VMGESR
Trigger: CCTGCTTTCACCCATGACCCATCTAGCTTCAGCTGT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATTCAGAAATGGAGGGTaGGAAAGACTCACCCATTGC +
Preference number: 2 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTFRNGG*ERLTHC
Trigger: GCAATGGGTGAGTCTTTCTCACCCTCCATTTCTGAA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCACCAAAGAAACTCGTTaGGGACAATGGAAGATGGGC +
Preference number: 2 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFTKETR*GQWKMG
Trigger: GCCCATCTTCCATTGTCCTCAACGAGTTTCTTTGGT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAGTCCCCAATCTCCCTaGTACACAAAGTCAGTAGCT +
Preference number: 2 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFSPQSP*YTKSVA
Trigger: AGCTACTGACTTTGTGTAGCAGGGAGATTGGGGACT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATTGTGCCATTACATTCTaGGGTGAGCGTCTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHCAITF*GERLPE
Trigger: CTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
3UTR-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGGGGCTCAGGTTTCTTaGCTGGAGTCAGTGTCTCCC +
Preference number: 2 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQGAQVS*LESVSP
Trigger: GGGAGACACTGACTCCAGCCAAGAAACCTGAGCCCC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATATCATGGTCACAAAGTaGCCACCCTACCATTTCAGC +
Preference number: 2 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDIMVTK*PPYHFS
Trigger: GCTGAAATGGTAGGGTGGCCACTTTGTGACCATGAT...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGCAAAACTCCTTGCCTaGAACACCTTTGAGGTTGGA +
Preference number: 2 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTAKLLA*NTFEVG
Trigger: TCCAACCTCAAAGGTGTTCCAGGCAAGGAGTTTTGC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATGTATCAATAACTGGTaGTGGGGTGAGAAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTCINNW*WGEKWL
Trigger: CAGCCACTTCTCACCCCACCACCAGTTATTGATACA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTCACTCAGTATTTCCTaGGGCTCTGTAAAGACCACA +
Preference number: 2 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFSLSIS*GSVKTT
Trigger: TGTGGTCTTTACAGAGCCCCAGGAAATACTGAGTGA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATAGACATTGTGCTAACTaGGCCTTGTTCAGAAATCGC +
Preference number: 2 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDRHCAN*ALFRNR
Trigger: GCGATTTCTGAACAAGGCCCAGTTAGCACAATGTCT...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGCAGGACAATGTAGCTaGTTTTATCAGACTCATACC +
Preference number: 2 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTAGQCS*FYQTHT
Trigger: GGTATGAGTCTGATAAAATCAGCTACATTGTCCTGC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACACATTAGTAGCACCTaGGCTAAGATCATGCAATTC +
Preference number: 2 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTHISST*AKIMQF
Trigger: GAATTGCATGATCTTAGCTCAGGTGCTACTAATGTG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACAGACTCATACCATTTaGATGAACAGGCTGAGTTTC +
Preference number: 2 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTQTHTI*MNRLSF
Trigger: GAAACTCAGCCTGTTCATGCAAATGGTATGAGTCTG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCAGACTCATACCATTTaGATGAACAGGCTGAGTTTC +
Preference number: 2 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFQTHTI*MNRLSF
Trigger: GAAACTCAGCCTGTTCATGCAAATGGTATGAGTCTG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCAGGGTGTTTGTTCATTaGTGCCTCCTCAGGGCTCTC +
Preference number: 2 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLRVFVH*CLLRAL
Trigger: GAGAGCCCTGAGGAGGCAGCAATGAACAAACACCCT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTTAACTAGGGGGAACTaGCTAACTCCATACGCTTTT +
Preference number: 2 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFLTRGN*LTPYAF
Trigger: AAAAGCGTATGGAGTTAGCCAGTTCCCCCTAGTTAA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTGGCCTTTGTTTAATTaGCGAGGGAAACAAAGAATC +
Preference number: 2 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFWPLFN*RGKQRI
Trigger: GATTCTTTGTTTCCCTCGTCAATTAAACAAAGGCCA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTTCATTCAAGTGCATTaGATGCCTATGTGGATAGAC +
Preference number: 2 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFFIQVH*MPMWID
Trigger: GTCTATCCACATAGGCATTCAATGCACTTGAATGAA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCTTATTTCAATTCCTTaGGGCACTTTTGACCATCTC +
Preference number: 2 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFLISIP*GTFDHL
Trigger: GAGATGGTCAAAAGTGCCTCAAGGAATTGAAATAAG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGTATTTATTGTCTGCTaGGCAAGACATTGTGCTAAC +
Preference number: 2 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDVFIVC*ARHCAN
Trigger: GTTAGCACAATGTCTTGCTCAGCAGACAATAAATAC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACCTCTCTCCATAATTTaGAAAAGTCTGACCAAAGTC +
Preference number: 2 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTPLSII*KSLTKV
Trigger: GACTTTGGTCAGACTTTTGCAAATTATGGAGAGAGG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCTCAGGTTTCTTGGCTaGAGTCAGTGTCTCCCTTAC +
Preference number: 2 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQLRFLG*SQCLPY
Trigger: GTAAGGGAGACACTGACTCCAGCCAAGAAACCTGAG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGAAGCTAGATGGGTCATaGGTGAAAGCAGGACAGGAC +
Preference number: 2 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQKLDGS*VKAGQD
Trigger: GTCCTGTCCTGCTTTCACCCATGACCCATCTAGCTT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCACCCTCTTAGCACTCTaGAGCCATAGCTCTGCAAAC +
Preference number: 2 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLTLLAL*SHSSAN
Trigger: GTTTGCAGAGCTATGGCTCCAGAGTGCTAAGAGGGT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCAGTCACTCCACTTCGTaGTACTTCTGCTTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLSHSTS*YFCFLL
Trigger: GAGGAGGAAGCAGAAGTACCACGAAGTGGAGTGACT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CAA 90 bp GTAGCACCTGAGCTAAGATCATGCAATTCAATTTACAAGTATTTATaGTCTGCTGAGCAAGACATTGTGCTAACTGGGCCTTGTTCAGAA +
Preference number: 2 (lower is better)
Translates to: VAPELRSCNSIYKYL*SAEQDIVLTGPCSE
Trigger: TTCTGAACAAGGCCCAGTTAGCACAATGTCTTGCTCAGCAGACAATAAATACTTGTAAATTGAATTGCATGATCTTAGCTCAGGTGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTCAGACACTGTCTTCTaGAACATTTACGTATACTTC +
Preference number: 2 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFSDTVF*NIYVYF
Trigger: GAAGTATACGTAAATGTTTCAGAAGACAGTGTCTGA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTCCTTGAGGCACTTTTaGCCATCTCTTAGAGTCAGC +
Preference number: 2 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLSLRHF*PSLRVS
Trigger: GCTGACTCTAAGAGATGGTCAAAAGTGCCTCAAGGA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATGTCCTTCTGCTGAGTaGGTTCTTAAATTAACAAAC +
Preference number: 2 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTCPSAE*VLKLTN
Trigger: GTTTGTTAATTTAAGAACTCACTCAGCAGAAGGACA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGAAAGGTTGTGTGGAGTaGGTTCTTGAGGGGTGGATT +
Preference number: 2 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQKGCVE*VLEGWI
Trigger: AATCCACCCCTCAAGAACCCACTCCACACAACCTTT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CAA 90 bp CATTGTGTTAACCTGTCAATAAAATCTCGCACTGTCCACAGTGTTTaGCAAACTGATTTAGGTTTTGGACTACAACAACTGGCCATTGAT +
Preference number: 2 (lower is better)
Translates to: HCVNLSIKSRTVHSV*QTDLGFGLQQLAID
Trigger: ATCAATGGCCAGTTGTTGTAGTCCAAAACCTAAATCAGTTTGCAAAACACTGTGGACAGTGCGAGATTTTATTGACAGGTTAACACAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGAAAAGTCTGTGCATTaGCAGTTTGAACCTCCCCTT +
Preference number: 2 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLEKSVH*QFEPPL
Trigger: AAGGGGAGGTTCAAACTGTCAATGCACAGACTTTTC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCCTGGGACCAGGGAATTaGTTCTTACATAATCTACCC +
Preference number: 2 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLLGPGN*FLHNLP
Trigger: GGGTAGATTATGTAAGAATCAATTCCCTGGTCCCAG...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGAGAATACAGTCTGGTaGTTAATCCACACTCCTGCA +
Preference number: 2 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQENTVW*LIHTPA
Trigger: TGCAGGAGTGTGGATTAAGCACCAGACTGTATTCTC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGTATCTGATTTAGCATaGTATCTTTTTAGTCGTCTC +
Preference number: 2 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFVSDLA*YLFSRL
Trigger: GAGACGACTAAAAAGATAGCATGCTAAATCAGATAC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGAAAGACTCACCCATTaGTATGTCTCAAGTCCTAAC +
Preference number: 2 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQERLTH*YVSSPN
Trigger: GTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTCACCTTTTCAGAAATaGAGGGTGAGAAAGACTCAC +
Preference number: 2 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLSPFQK*RVRKTH
Trigger: GTGAGTCTTTCTCACCCTCCATTTCTGAAAAGGTGA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTTAACTAGGGGGAACTaGCTAACTCCATACGCTTTT +
Preference number: 2 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQLTRGN*LTPYAF
Trigger: AAAAGCGTATGGAGTTAGCCAGTTCCCCCTAGTTAA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTGGCCTTTGTTTAATTaGCGAGGGAAACAAAGAATC +
Preference number: 2 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQWPLFN*RGKQRI
Trigger: GATTCTTTGTTTCCCTCGTCAATTAAACAAAGGCCA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTTACATAATCTACCCTaGAAGAGGAAACTCCTTGCT +
Preference number: 2 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLLHNLP*KRKLLA
Trigger: AGCAAGGAGTTTCCTCTTTCAGGGTAGATTATGTAA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCCTTTGAGGTTGGACTaGATGGCAGAATTTAATTTC +
Preference number: 2 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQPLRLD*MAEFNF
Trigger: GAAATTAAATTCTGCCATTCAGTCCAACCTCAAAGG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCAGTGTTTTGCAAACTaGTTTAGGTTTTGGACTACA +
Preference number: 2 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQQCFAN*FRFWTT
Trigger: TGTAGTCCAAAACCTAAATCAGTTTGCAAAACACTG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTCACAGGCTGCCACACTaGGCGAGGGAACCAGAGTCC +
Preference number: 3 (lower is better)
Translates to: PCLPVGILGAETGMHPHSHRLPH*AREPES
Trigger: GGACTCTGGTTCCCTCGCCAAGTGTGGCAGCCTGTG...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 72 bp CAAGTAAGCCCCCAACACTGCACAGGCTGCCACACTTaGCGAGGGAACCAGAGTCCCCAATCTCCCTGCTAC +
Preference number: 3 (lower is better)
Translates to: QVSPQHCTGCHT*RGNQSPQSPCY
Trigger: GTAGCAGGGAGATTGGGGACTCTGGTTCCCTCGCCAAGTGTGGCAGCCTGTGCAGTGTTGGGGGCTTACTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR GCA 72 bp TGCTGCCTCACAGTGACACAAAGTCAAGGGCCTCCCTaGCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGA +
Preference number: 3 (lower is better)
Translates to: CCLTVTQSQGPP*LPVGILGAETG
Trigger: TCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGGAGGCCCTTGACTTTGTGTCACTGTGAGGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR GCA 72 bp TACTGCACCTCCCCTGATGCAGAGCATGGACTCTGCTaGCTCACAGTGACACAAAGTCAAGGGCCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: YCTSPDAEHGLC*LTVTQSQGPPC
Trigger: GCAGGGAGGCCCTTGACTTTGTGTCACTGTGAGGCAGCAGAGTCCATGCTCTGCATCAGGGGAGGTGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp CAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTaGACCAGGAGGTTGGGACTGAATCACTGGGCCAGT +
Preference number: 3 (lower is better)
Translates to: QATWRDGKQAGS*TRRLGLNHWAS
Trigger: ACTGGCCCAGTGATTCAGTCCCAACCTCCTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp CTGCTGAAAGGGTCAGTCCATGGGGCCATGCTTAAATaGCACGGCCCTGCCTCCTTGGTAACAGGTGATTGG +
Preference number: 3 (lower is better)
Translates to: LLKGSVHGAMLK*HGPASLVTGDW
Trigger: CCAATCACCTGTTACCAAGGAGGCAGGGCCGTGTCATTTAAGCATGGCCCCATGGACTGACCCTTTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR GCA 72 bp AACAGATACCAAGTAAGCCCCCAACACTGCACAGGCTaGCACACTTGGCGAGGGAACCAGAGTCCCCAATCT +
Preference number: 3 (lower is better)
Translates to: NRYQVSPQHCTG*HTWRGNQSPQS
Trigger: AGATTGGGGACTCTGGTTCCCTCGCCAAGTGTGGCAGCCTGTGCAGTGTTGGGGGCTTACTTGGTATCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 72 bp TGTGTTACTGACAAGCCTGCAGGCCACATGGCGAGATaGAAAGCAAGCAGGTTCGTGAACCAGGAGGTTGGG +
Preference number: 3 (lower is better)
Translates to: CVTDKPAGHMAR*KASRFVNQEVG
Trigger: CCCAACCTCCTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTCAGTAACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTAAGTCAGTAGCTGTTTaGCTTGCATTGATGGGTAGG +
Preference number: 3 (lower is better)
Translates to: PCLPVGILGAETGMHPHSKSVAV*LALMGR
Trigger: CCTACCCATCAATGCAAGCAAAACAGCTACTGACTT...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp CAAGTCCTAACACGTAGGCATGGGAAACCCAAAGGCTaGGTCCTCAGAGTTTGGAAGTCCAGAGTCCCACGG +
Preference number: 3 (lower is better)
Translates to: QVLTRRHGKPKG*VLRVWKSRVPR
Trigger: CCGTGGGACTCTGGACTTCCAAACTCTGAGGACTCAGCCTTTGGGTTTCCCATGCCTACGTGTTAGGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp GAAAGCAAGCAGGTTCGTGAACCAGGAGGTTGGGACTaGATCACTGGGCCAGTCACTCCACTTCGTGGTACT +
Preference number: 3 (lower is better)
Translates to: ESKQVREPGGWD*ITGPVTPLRGT
Trigger: AGTACCACGAAGTGGAGTGACTGGCCCAGTGATTCAGTCCCAACCTCCTGGTTCACGAACCTGCTTGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR GCA 72 bp TCTGGAAGCCAACTCACCATGCCAGGGAGGGCAACTTaGAACATCATGGTCACAAAGTGGCCACCCTACCAT +
Preference number: 3 (lower is better)
Translates to: SGSQLTMPGRAT*NIMVTKWPPYH
Trigger: ATGGTAGGGTGGCCACTTTGTGACCATGATGTTGCAAGTTGCCCTCCCTGGCATGGTGAGTTGGCTTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR GCA 72 bp TCATTCTCCAACAGATACCAAGTAAGCCCCCAACACTaGACAGGCTGCCACACTTGGCGAGGGAACCAGAGT +
Preference number: 3 (lower is better)
Translates to: SFSNRYQVSPQH*TGCHTWRGNQS
Trigger: ACTCTGGTTCCCTCGCCAAGTGTGGCAGCCTGTGCAGTGTTGGGGGCTTACTTGGTATCTGTTGGAGAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 72 bp AGAACCCAAGGGGTACATACAGACTCCTGGCCCTTGTaGGGCAGAATAGAAAGAACGACTGAGGGTCAGAGC +
Preference number: 3 (lower is better)
Translates to: RTQGVHTDSWPL*GRIERTTEGQS
Trigger: GCTCTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGTATGTACCCCTTGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
3UTR CCA 72 bp TTGGGACTGAATCACTGGGCCAGTCACTCCACTTCGTaGTACTTCTGCTTCCTCCTCCAAGGTCAACCAAGG +
Preference number: 3 (lower is better)
Translates to: LGLNHWASHSTS*YFCFLLQGQPR
Trigger: CCTTGGTTGACCTTGGAGGAGGAAGCAGAAGTACCACGAAGTGGAGTGACTGGCCCAGTGATTCAGTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCTGAGTCCTCAGAGTTaGGAAGTCCAGAGTCCCACG +
Preference number: 3 (lower is better)
Translates to: RDHISLTENLTRVALSPHLSPQS*EVQSPT
Trigger: CGTGGGACTCTGGACTTCCAAACTCTGAGGACTCAG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp GGAAGTGAGACAGGACAATTCAGACAAGGGGTAAGGTaGGAACCCAAGGGGTACATACAGACTCCTGGCCCT +
Preference number: 3 (lower is better)
Translates to: GSETGQFRQGVR*EPKGYIQTPGP
Trigger: AGGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAATTGTCCTGTCTCACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
3UTR CCA 72 bp GGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTaGCCCTTGTGGGGCAGAATAGAAAGAACGACTGAG +
Preference number: 3 (lower is better)
Translates to: GKVRTQGVHTDS*PLWGRIERTTE
Trigger: CTCAGTCGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
3UTR-3UTR CAA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGAGGTCTCCGTTTCCTaGATGGTACTCTTTCTGGAA +
Preference number: 3 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCEVSVS*MVLFLE
Trigger: TTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAAGCTGGGGGTGGTTCTaGGAGGGAAGGCTTCTCACC +
Preference number: 3 (lower is better)
Translates to: QLFQRSAALVELVQEIASSWGWF*EGRLLT
Trigger: GGTGAGAAGCCTTCCCTCCAAGAACCACCCCCAGCT...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265654.6
3UTR-3UTR CAA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCTGAGTCCTCAGAGTTaGGAAGTCCAGAGTCCCACG +
Preference number: 3 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRLSPQS*EVQSPT
Trigger: CGTGGGACTCTGGACTTCCAAACTCTGAGGACTCAG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGAAGTACTATTTCCTTTaGTACCACTCAGCAGCACAC +
Preference number: 3 (lower is better)
Translates to: DKPAGHMARWKASRFVNQKYYFL*YHSAAH
Trigger: GTGTGCTGCTGAGTGGTACAAAAGGAAATAGTACTT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCACAGGCTGCCACACTaGGCGAGGGAACCAGAGTCC +
Preference number: 3 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFHRLPH*AREPES
Trigger: GGACTCTGGTTCCCTCGCCAAGTGTGGCAGCCTGTG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp AGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTaGACCCATGAAACTTATCAGGGGAGTCAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: SGVAISGLSGTD*THETYQGSQGR
Trigger: CCTGCCCTGACTCCCCTGATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
3UTR GCA 72 bp AATCACTGGGCCAGTCACTCCACTTCGTGGTACTTCTaGTTCCTCCTCCAAGGTCAACCAAGGTCCTTTTGT +
Preference number: 3 (lower is better)
Translates to: NHWASHSTSWYF*FLLQGQPRSFC
Trigger: ACAAAAGGACCTTGGTTGACCTTGGAGGAGGAAGCAGAAGTACCACGAAGTGGAGTGACTGGCCCAGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 72 bp GCCTTAGGCATCACAGAGATGCTAGTCAGAGCGTGGTaGGTACTGAAAAGGAAAGGTTGTGTGGAGTGGGTT +
Preference number: 3 (lower is better)
Translates to: ALGITEMLVRAW*VLKRKGCVEWV
Trigger: AACCCACTCCACACAACCTTTCCTTTTCAGTACCCACCACGCTCTGACTAGCATCTCTGTGATGCCTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGTGCGCACGGTCATGGTaGAATGAGAATACAGTCTGG +
Preference number: 3 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVCARSW*NENTVW
Trigger: CCAGACTGTATTCTCATTCAACCATGACCGTGCGCA...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp CAGTCTAGCAGAGTTTCAAGTGTGTGCACCCTCACCTaGTGTGCAAGTGAAGATGCCCCTTTTCTCTGTGTG +
Preference number: 3 (lower is better)
Translates to: QSSRVSSVCTLT*CASEDAPFLCV
Trigger: CACACAGAGAAAAGGGGCATCTTCACTTGCACATCAGGTGAGGGTGCACACACTTGAAACTCTGCTAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 72 bp CCAGGGAGGGCAACTTGCAACATCATGGTCACAAAGTaGCCACCCTACCATTTCAGCAAATGTCTTCCTATG +
Preference number: 3 (lower is better)
Translates to: PGRATCNIMVTK*PPYHFSKCLPM
Trigger: CATAGGAAGACATTTGCTGAAATGGTAGGGTGGCCACTTTGTGACCATGATGTTGCAAGTTGCCCTCCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 72 bp AACTCACCATGCCAGGGAGGGCAACTTGCAACATCATaGTCACAAAGTGGCCACCCTACCATTTCAGCAAAT +
Preference number: 3 (lower is better)
Translates to: NSPCQGGQLATS*SQSGHPTISAN
Trigger: ATTTGCTGAAATGGTAGGGTGGCCACTTTGTGACCATGATGTTGCAAGTTGCCCTCCCTGGCATGGTGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 72 bp ACCACAGTGATTTGTGACTCCACCCTCTTAGCACTCTaGAGCCATAGCTCTGCAAACTGTAGACTCAGTCTC +
Preference number: 3 (lower is better)
Translates to: TTVICDSTLLAL*SHSSANCRLSL
Trigger: GAGACTGAGTCTACAGTTTGCAGAGCTATGGCTCCAGAGTGCTAAGAGGGTGGAGTCACAAATCACTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp GCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCTCCTTGCCTCCTCCTTaGTCACTTTCTGCTGTGCCA +
Preference number: 3 (lower is better)
Translates to: AVISEICCLSGTGARNCVSLPPP*SLSAVP
Trigger: TGGCACAGCAGAAAGTGACAAAGGAGGAGGCAAGGA...GACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
3UTR-3UTR CAA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATAAGTCAGTAGCTGTTTaGCTTGCATTGATGGGTAGG +
Preference number: 3 (lower is better)
Translates to: RDHISLTENLTRVALSPHKSVAV*LALMGR
Trigger: CCTACCCATCAATGCAAGCAAAACAGCTACTGACTT...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp AGTTTCAAGTGTGTGCACCCTCACCTGATGTGCAAGTaGAGATGCCCCTTTTCTCTGTGTGGTAGTATCCAG +
Preference number: 3 (lower is better)
Translates to: SFKCVHPHLMCK*RCPFSLCGSIQ
Trigger: CTGGATACTACCACACAGAGAAAAGGGGCATCTTCACTTGCACATCAGGTGAGGGTGCACACACTTGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCACTGGACATCATTGTaGAAGAGACAGAGATTTTCT +
Preference number: 3 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQHWTSL*KRQRFS
Trigger: AGAAAATCTCTGTCTCTTCAACAATGATGTCCAGTG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGCCAGGGAGGGCAACTaGCAACATCATGGTCACAAA +
Preference number: 3 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTAREGN*QHHGHK
Trigger: TTTGTGACCATGATGTTGCAAGTTGCCCTCCCTGGC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGCCAGGGAGGGCAACTaGCAACATCATGGTCACAAA +
Preference number: 3 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDAREGN*QHHGHK
Trigger: TTTGTGACCATGATGTTGCAAGTTGCCCTCCCTGGC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGATCCGAACAAGAGACTaGTTTGAAGGTTCCATGACA +
Preference number: 3 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVIRTRD*FEGSMT
Trigger: TGTCATGGAACCTTCAAACAAGTCTCTTGTTCGGAT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGTTCATTCAAGTGCATaGAATGCCTATGTGGATAGA +
Preference number: 3 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQVHSSA*NAYVDR
Trigger: TCTATCCACATAGGCATTCAATGCACTTGAATGAAC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp TTTAAACCTCTAGGCACAGCTAAAGAAATGTGTTACTaGCAAGCCTGCAGGCCACATGGCGAGATGGAAAGC +
Preference number: 3 (lower is better)
Translates to: FKPLGTAKEMCY*QACRPHGEMES
Trigger: GCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTCAGTAACACATTTCTTTAGCTGTGCCTAGAGGTTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp CTCATTGGTTTTCTTATCCATGCAAGTGTGTGGCCGTaGGCCACATTAGTAGCACCTGAGCTAAGATCATGC +
Preference number: 3 (lower is better)
Translates to: LIGFLIHASVWP*ATLVAPELRSC
Trigger: GCATGATCTTAGCTCAGGTGCTACTAATGTGGCTCACGGCCACACACTTGCATGGATAAGAAAACCAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR GCA 72 bp TGCGCACGGTCATGGTTGAATGAGAATACAGTCTGGTaGTTAATCCACACTCCTGCATTGCCTTTAACACAG +
Preference number: 3 (lower is better)
Translates to: CARSWLNENTVW*LIHTPALPLTQ
Trigger: CTGTGTTAAAGGCAATGCAGGAGTGTGGATTAAGCACCAGACTGTATTCTCATTCAACCATGACCGTGCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR GCA 72 bp AGTGGGTTCTTGAGGGGTGGATTTTTCAGCTACATATaGACTAATGAGAAAGCTGGTTGGCCAGGAGAAGCA +
Preference number: 3 (lower is better)
Translates to: SGFLRGGFFSYI*TNEKAGWPGEA
Trigger: TGCTTCTCCTGGCCAACCAGCTTTCTCATTAGTGCATATGTAGCTGAAAAATCCACCCCTCAAGAACCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 72 bp AGAAGAAAATGGATACAGCTGAAGCTAGATGGGTCATaGGTGAAAGCAGGACAGGACCTCATTCTCCAACAG +
Preference number: 3 (lower is better)
Translates to: RRKWIQLKLDGS*VKAGQDLILQQ
Trigger: CTGTTGGAGAATGAGGTCCTGTCCTGCTTTCACCCATGACCCATCTAGCTTCAGCTGTATCCATTTTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTGCGCACGGTCATGGTaGAATGAGAATACAGTCTGG +
Preference number: 3 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFCARSW*NENTVW
Trigger: CCAGACTGTATTCTCATTCAACCATGACCGTGCGCA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAAGGGCAGTTTGCCATaGGAAAATATAAACAACTTC +
Preference number: 3 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQKGSLP*ENINNF
Trigger: GAAGTTGTTTATATTTTCCAATGGCAAACTGCCCTT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATACTGTCCACAGTGTTTaGCAAACTGATTTAGGTTTT +
Preference number: 3 (lower is better)
Translates to: RDHISLTENLTRVALSPHTVHSV*QTDLGF
Trigger: AAAACCTAAATCAGTTTGCAAAACACTGTGGACAGT...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp AGAAGCCCCATAGTTCACCTTTTCAGAAATGGAGGGTaGGAAAGACTCACCCATTGCTATGTCTCAAGTCCT +
Preference number: 3 (lower is better)
Translates to: RSPIVHLFRNGG*ERLTHCYVSSP
Trigger: AGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCATTTCTGAAAAGGTGAACTATGGGGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp AGTACTAGTCAGTTCCAGTGTGTAGTAGGTTCTTTTTaGAGGTCTTGCCCACTCATGCTCCTTCTTCTGGGT +
Preference number: 3 (lower is better)
Translates to: STSQFQCVVGSF*RSCPLMLLLLG
Trigger: ACCCAGAAGAAGGAGCATGAGTGGGCAAGACCTTCAAAAAGAACCTACTACACACTGGAACTGACTAGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 72 bp GTGAAAGGGTTTCTAGTCCTTGCAAAACTCCTTGCCTaGAACACCTTTGAGGTTGGACTGAATGGCAGAATT +
Preference number: 3 (lower is better)
Translates to: VKGFLVLAKLLA*NTFEVGLNGRI
Trigger: AATTCTGCCATTCAGTCCAACCTCAAAGGTGTTCCAGGCAAGGAGTTTTGCAAGGACTAGAAACCCTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATGGCTTCCCTGATTCGTaGCTGATGACAGAGCCATTC +
Preference number: 3 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHGFPDS*LMTEPF
Trigger: GAATGGCTCTGTCATCAGCAACGAATCAGGGAAGCC...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
3UTR-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATGTGCTAACTGGGCCTaGTTCAGAAATCGCTTCCTA +
Preference number: 3 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTCANWA*FRNRFL
Trigger: TAGGAAGCGATTTCTGAACAAGGCCCAGTTAGCACA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp CTCTGGGAACCTTATTTCAATTCCTTGAGGCACTTTTaGCCATCTCTTAGAGTCAGCTGTCCAGTCATCTCT +
Preference number: 3 (lower is better)
Translates to: LWEPYFNSLRHF*PSLRVSCPVIS
Trigger: AGAGATGACTGGACAGCTGACTCTAAGAGATGGTCAAAAGTGCCTCAAGGAATTGAAATAAGGTTCCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR GCA 72 bp CTGAAAGAGGAAACTCCTTGCTCTGTAGGTAACAGCTaGCATCTTATTATGCACAAGCCTCAGATCATAGGT +
Preference number: 3 (lower is better)
Translates to: LKEETPCSVGNS*HLIMHKPQIIG
Trigger: ACCTATGATCTGAGGCTTGTGCATAATAAGATGGCAGCTGTTACCTACAGAGCAAGGAGTTTCCTCTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 72 bp TTTTTAGTCGTCTCAGTTGACTCACTCAGTATTTCCTaGGGCTCTGTAAAGACCACAGTGATTTGTGACTCC +
Preference number: 3 (lower is better)
Translates to: FLVVSVDSLSIS*GSVKTTVICDS
Trigger: GGAGTCACAAATCACTGTGGTCTTTACAGAGCCCCAGGAAATACTGAGTGAGTCAACTGAGACGACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATATCCACACTCCTGCATaGCCTTTAACACAGAAACAG +
Preference number: 3 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDIHTPA*PLTQKQ
Trigger: CTGTTTCTGTGTTAAAGGCAATGCAGGAGTGTGGAT...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAATCCACACTCCTGCATaGCCTTTAACACAGAAACAG +
Preference number: 3 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTIHTPA*PLTQKQ
Trigger: CTGTTTCTGTGTTAAAGGCAATGCAGGAGTGTGGAT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGCTGTTTTGCTTGCATaGATGGGTAGGCAGCGGCTG +
Preference number: 3 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLAVLLA*MGRQRL
Trigger: CAGCCGCTGCCTACCCATCAATGCAAGCAAAACAGC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTGCCTGTTGGGATCCTaGGTGCTGAGACAGGAATGC +
Preference number: 3 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQCLLGS*VLRQEC
Trigger: GCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp TACAAACTGATTTTAATGCGCACGGTCATGGTTGAATaGGAATACAGTCTGGTGCTTAATCCACACTCCTGC +
Preference number: 3 (lower is better)
Translates to: YKLILMRTVMVE*EYSLVLNPHSC
Trigger: GCAGGAGTGTGGATTAAGCACCAGACTGTATTCTCATTCAACCATGACCGTGCGCATTAAAATCAGTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp CACAGTCTAGAACAGCAGTTGAGGTCTCCGTTTCCTTaGTGGTACTCTTTCTGGAAAAAGCCAAAATGCATT +
Preference number: 3 (lower is better)
Translates to: HSLEQQLRSPFP*WYSFWKKPKCI
Trigger: AATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTCAACTGCTGTTCTAGACTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp TCTAGTCCTTGCAAAACTCCTTGCCTGGAACACCTTTaGGGTTGGACTGAATGGCAGAATTTAATTTCCAAC +
Preference number: 3 (lower is better)
Translates to: SSPCKTPCLEHL*GWTEWQNLISN
Trigger: GTTGGAAATTAAATTCTGCCATTCAGTCCAACCTCAAAGGTGTTCCAGGCAAGGAGTTTTGCAAGGACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAATCCGAACAAGAGACTaGTTTGAAGGTTCCATGACA +
Preference number: 3 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTIRTRD*FEGSMT
Trigger: TGTCATGGAACCTTCAAACAAGTCTCTTGTTCGGAT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGCCTCTCTCCATAATTaGCAAAAGTCTGACCAAAGT +
Preference number: 3 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDASLHN*QKSDQS
Trigger: ACTTTGGTCAGACTTTTGCAAATTATGGAGAGAGGC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp TCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTaGTTTATTAAAATGTGGCATTGGATAGGAATCTGT +
Preference number: 3 (lower is better)
Translates to: SPKIRATFSRFR*FIKMWHWIGIC
Trigger: ACAGATTCCTATCCAATGCCACATTTTAATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp TTATCATCCGAACAAGAGACTTGTTTGAAGGTTCCATaGCACATCATCTCTGAACATTCCAGAAAGGGCAGT +
Preference number: 3 (lower is better)
Translates to: LSSEQETCLKVP*HIISEHSRKGS
Trigger: ACTGCCCTTTCTGGAATGTTCAGAGATGATGTGTCATGGAACCTTCAAACAAGTCTCTTGTTCGGATGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp TCTGATTTAGCATGCTATCTTTTTAGTCGTCTCAGTTaGCTCACTCAGTATTTCCTGGGGCTCTGTAAAGAC +
Preference number: 3 (lower is better)
Translates to: SDLACYLFSRLS*LTQYFLGLCKD
Trigger: GTCTTTACAGAGCCCCAGGAAATACTGAGTGAGTCAACTGAGACGACTAAAAAGATAGCATGCTAAATCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR GCA 72 bp CTTCAAGTGCTTGTCAAGCCATTTTCAGATACATTATaGATGTGCTCCTCAAAATCACCATGGGAAGTACAG +
Preference number: 3 (lower is better)
Translates to: LQVLVKPFSDTL*MCSSKSPWEVQ
Trigger: CTGTACTTCCCATGGTGATTTTGAGGAGCACATGCATAATGTATCTGAAAATGGCTTGACAAGCACTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAAGGGCAGTTTGCCATaGGAAAATATAAACAACTTC +
Preference number: 3 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFKGSLP*ENINNF
Trigger: GAAGTTGTTTATATTTTCCAATGGCAAACTGCCCTT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp GACACTACCTATTATCATCCGAACAAGAGACTTGTTTaGAGGTTCCATGACACATCATCTCTGAACATTCCA +
Preference number: 3 (lower is better)
Translates to: DTTYYHPNKRLV*RFHDTSSLNIP
Trigger: TGGAATGTTCAGAGATGATGTGTCATGGAACCTTCAAACAAGTCTCTTGTTCGGATGATAATAGGTAGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp CTGAGTTTCTTTGGCTCTTTGTTCATTCAAGTGCATTaGATGCCTATGTGGATAGACGTAGGCATTGTGTTA +
Preference number: 3 (lower is better)
Translates to: LSFFGSLFIQVH*MPMWIDVGIVL
Trigger: TAACACAATGCCTACGTCTATCCACATAGGCATTCAATGCACTTGAATGAACAAAGAGCCAAAGAAACTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CCA 72 bp TCAGATACATTATGCATGTGCTCCTCAAAATCACCATaGGAAGTACAGAGGGTCTTATACTCATTTGACAGA +
Preference number: 3 (lower is better)
Translates to: SDTLCMCSSKSP*EVQRVLYSFDR
Trigger: TCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACATGCATAATGTATCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR TCA 72 bp TTGTACCACTCAGCAGCACACACTGGACATCATTGTTaGAGAGACAGAGATTTTCTTGTAAAAGTTGATGTA +
Preference number: 3 (lower is better)
Translates to: LYHSAAHTGHHC*RDRDFLVKVDV
Trigger: TACATCAACTTTTACAAGAAAATCTCTGTCTCTTCAACAATGATGTCCAGTGTGTGCTGCTGAGTGGTACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR-3UTR CAA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGTTCATTCAAGTGCATaGAATGCCTATGTGGATAGA +
Preference number: 3 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLVHSSA*NAYVDR
Trigger: TCTATCCACATAGGCATTCAATGCACTTGAATGAAC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGCGCTGTCGTGCAGCTaGGCCGGCTCGGGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSALSCS*AGSGPV
Trigger: TACAGGGCCCGAGCCGGCCCAGCTGCACGACAGCGC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTCCGCGGATGCCAGGCTaGAGGCCTCCTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSPRMPG*RPPPAA
Trigger: TGCTGCTGGAGGAGGCCTTCAGCCTGGCATCCGCGG...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGTTCCCGGGTCGGCCTaGCCGTGCTCCAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQVPGSA*PCSRRA
Trigger: GGCCCTCCTGGAGCACGGCCAGGCCGACCCGGGAAC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCCCTGGGCCGCGTCATaGTCCCCGGAGCGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQPWAAS*SPERWS
Trigger: TGACCAGCGCTCCGGGGACCATGACGCGGCCCAGGG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTTCCCGGGCCGCGAGTaGTACCGCAGCTCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQFPGRE*YRSSER
Trigger: CCGCTCTGAGCTGCGGTAGCACTCGCGGCCCGGGAA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGGGCCTGCTCCAGGCTaGGGTGCAGGTTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQGPAPG*GAGWLA
Trigger: AGCCAGCCAACCTGCACCCCAGCCTGGAGCAGGCCC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGCCAGGCGCTGCTCCATaGCCCGGGCAAAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSPGAAP*PGQSSG
Trigger: ACCAGAGCTTTGCCCGGGTCATGGAGCAGCGCCTGG...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGCTCTGGGGGTACCGTaGTCGGGGGTAGGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQALGVP*SGVGLD
Trigger: ATCGAGGCCTACCCCCGATCACGGTACCCCCAGAGC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGGGGCCATGCTTAAATaGCACGGCCCTGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSGAMLK*HGPASL
Trigger: CAAGGAGGCAGGGCCGTGTCATTTAAGCATGGCCCC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGAGGGGACCCATCACTaGCCTCTGCTGGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSEGTHH*PLLEEW
Trigger: CCACTCTTCCAGCAGAGGGCAGTGATGGGTCCCCTC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTACACATCCAGGCCGCTaGCTCGCTCTGCACCGCGCC +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCTHPGR*LALHRA
Trigger: GGCGCGGTGCAGAGCGAGGCAGCGGCCTGGATGTGT...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR GCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCCCCGGGCCGGCTCCTaGAGAACTAGGGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHPRAGS*RTRGRG
Trigger: GCCTCGCCCCCTAGTTCTGCAGGAGCCGGCCCGGGG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGCATCTCCAGGTTGGTaGGGTTTGGGAGGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSASPGW*GLGGRC
Trigger: ACACCGGCCTCCCAAACCCCACCAACCTGGAGATGC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGTGGCGTGGATGCTCTaGGCATCTCCAGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSVAWML*ASPGWW
Trigger: CCACCAACCTGGAGATGCCCAGAGCATCCACGCCAC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGACTGCACCCCGGCCCTaGGCCGCGTCATGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQTAPRP*AASWSP
Trigger: CGGGGACCATGACGCGGCCCAGGGCCGGGGTGCAGT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCCACCTCCTCCCGGATaGCCTTCACAAGGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQPPPPG*PSQGPQ
Trigger: CTGCGGCCCTTGTGAAGGCCATCCGGGAGGAGGTGG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGGCTCTTAGCTGGTCCTaGGGCCACGGCCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSALSWS*GHGQRA
Trigger: AGCCCTTTGGCCGTGGCCTCAGGACCAGCTAAGAGC...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCCAGGCGCTGCTCCATaGCCCGGGCAAAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCPGAAP*PGQSSG
Trigger: ACCAGAGCTTTGCCCGGGTCATGGAGCAGCGCCTGG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTCTTGCTGCCGATGTCTaGGGTGGATCGCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSLAADV*GGSPER
Trigger: TCTCTCAGGCGATCCACCTCAGACATCGGCAGCAAG...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTCCAGGAGGTTGGGACTaGATCACTGGGCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSPGGWD*ITGPVT
Trigger: AGTGACTGGCCCAGTGATTCAGTCCCAACCTCCTGG...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTTCCTCCAGCAGCATGTaGATCTGCTGCCTGACCTCG +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSSSSSM*ICCLTS
Trigger: CGAGGTCAGGCAGCAGATGCACATGCTGCTGGAGGA...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGTAGGCAGCGGCTGGTaGCTCAGTGCCGTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCVGSGW*LSAVRR
Trigger: TCGCCTCACGGCACTGAGGCACCAGCCGCTGCCTAC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGTAAGCCCCCAACACTaGACAGGCTGCCACACTTGG +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSVSPQH*TGCHTW
Trigger: CCAAGTGTGGCAGCCTGTGCAGTGTTGGGGGCTTAC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCCGAGTGCTGGCTGCTaGGTGGCATGGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCPSAGC*VAWHPR
Trigger: CCTGGGATGCCATGCCACGCAGCAGCCAGCACTCGG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTGGAGGGGGAGACGGATaGGACAGTTCTGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRGGGDG*DSSAMG
Trigger: CCCCATGGCAGAACTGTCCCATCCGTCTCCCCCTCC...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTGTAAGTCAGCTCCGCTaGGTCCTTCGGGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRVSQLR*VLRAWD
Trigger: GTCCCAGGCCCGAAGGACCCAGCGGAGCTGACTTAC...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGTAAGTCAGCTCCGCTaGGTCCTTCGGGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQVSQLR*VLRAWD
Trigger: GTCCCAGGCCCGAAGGACCCAGCGGAGCTGACTTAC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGCGGCTCTGGCCTGCGTaGCCCGCGGATGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVRLWPA*PADARL
Trigger: CAGCCTGGCATCCGCGGGCCACGCAGGCCAGAGCCG...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGACTGCACCCCGGCCCTaGGCCGCGTCATGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVTAPRP*AASWSP
Trigger: CGGGGACCATGACGCGGCCCAGGGCCGGGGTGCAGT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGCGCTGTCGTGCAGCTaGGCCGGCTCGGGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQALSCS*AGSGPV
Trigger: TACAGGGCCCGAGCCGGCCCAGCTGCACGACAGCGC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTGGTGGGGTGAGAAGTaGCTGGGGCAGCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQWWGEK*LGQLWP
Trigger: TGGCCAGAGCTGCCCCAGCCACTTCTCACCCCACCA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTTCCCTGATGGGACTGTaGACAACGAGGGGAGCATGC +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSSLMGL*TTRGAC
Trigger: GCATGCTCCCCTCGTTGTCCACAGTCCCATCAGGGA...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000658780.2
3UTR CAA 72 bp CCAAGTAAGCCCCCAACACTGCACAGGCTGCCACACTaGGCGAGGGAACCAGAGTCCCCAATCTCCCTGCTA +
Preference number: 4 (lower is better)
Translates to: PSKPPTLHRLPH*AREPESPISLL
Trigger: TAGCAGGGAGATTGGGGACTCTGGTTCCCTCGCCAAGTGTGGCAGCCTGTGCAGTGTTGGGGGCTTACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTCAGGCACCCCAGCTTTaGTCTGCTGGGTGGATGCAG +
Preference number: 4 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRQAPQL*SAGWMQ
Trigger: CTGCATCCACCCAGCAGATCAAAGCTGGGGTGCCTG...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGATGTCAGCGCGGCCGTaGCTGTCAGTGGGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQMSARP*LSVGVA
Trigger: CGCCACGCCCACTGACAGTCACGGCCGCGCTGACAT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTAGAACCACTGTCTCCTaGGTCACAGGGATGACCTCC +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSRTTVS*VTGMTS
Trigger: GGAGGTCATCCCTGTGACTCAGGAGACAGTGGTTCT...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCCGCGGATGCCAGGCTaGAGGCCTCCTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHPRMPG*RPPPAA
Trigger: TGCTGCTGGAGGAGGCCTTCAGCCTGGCATCCGCGG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGTGTGCACCCTCACCTaGTGTGCAAGTGAAGATGCC +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSVCTLT*CASEDA
Trigger: GGCATCTTCACTTGCACATCAGGTGAGGGTGCACAC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTGGGCGTGGCGTGGATaGTCTGGGCATCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSWAWRG*SGHLQV
Trigger: AACCTGGAGATGCCCAGAGCATCCACGCCACGCCCA...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCGTGCACGCATGTGTGTaGGGGCACGCGTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPVHACV*GHAWEQ
Trigger: CTGCTCCCACGCGTGCCCGCACACACATGCGTGCAC...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGATGACCTCCTCATCTaGCCCTTGCTGGCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQDDLLI*PLLAQV
Trigger: CACCTGGGCCAGCAAGGGGCAGATGAGGAGGTCATC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTTTTCGGTCAGACCCTTaGTCGTCTCCACTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSFRSDP*SSPLQG
Trigger: TCCCTGCAGTGGAGACGAGCAAGGGTCTGACCGAAA...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATGTGCCGGCTCTGGCCTaGGTGGCCCGCGGATGCCAG +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYVPALA*VARGCQ
Trigger: CTGGCATCCGCGGGCCACGCAGGCCAGAGCCGGCAC...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGGGACAGTTCTGCCATaGGGCTCAAAAACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSGTVLP*GSKTQV
Trigger: CACCTGGGTTTTTGAGCCCCATGGCAGAACTGTCCC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTCAGTGGGCGTGGCGTaGATGCTCTGGGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQSVGVA*MLWASP
Trigger: TGGAGATGCCCAGAGCATCCACGCCACGCCCACTGA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGGACTGTCAGTGGGCGTaGCGTGGATGCTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSDCQWA*RGCSGH
Trigger: ATGCCCAGAGCATCCACGCCACGCCCACTGACAGTC...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTGGGTCCTTCGGGCCTaGGACACGCTGCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQWVLRA*DTLHLH
Trigger: GTGAAGATGCAGCGTGTCCCAGGCCCGAAGGACCCA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTCATCTCGGTTTCCCCTaGACTCGGGCTGTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSHLGFP*TRAVQR
Trigger: TCTCTGAACAGCCCGAGTCCAGGGGAAACCGAGATG...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATCGGCTCTGGCCTGCGTaGCCCGCGGATGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYRLWPA*PADARL
Trigger: CAGCCTGGCATCCGCGGGCCACGCAGGCCAGAGCCG...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGGAGATGGGGAGGCATaGTTCTCTGTGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCGDGEA*FSVGWR
Trigger: CCTCCAGCCCACAGAGAATCATGCCTCCCCATCTCC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGCTCTTAGCTGGTCCTaGGGCCACGGCCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLALSWS*GHGQRA
Trigger: AGCCCTTTGGCCGTGGCCTCAGGACCAGCTAAGAGC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTTTGAGGAATGTGCTCTaGTTGCCCACGACGTACACC +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSLRNVL*LPTTYT
Trigger: GGTGTACGTCGTGGGCAATCAGAGCACATTCCTCAA...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGGGCAGGTGCTGGGCTaGGCCGTAGGCCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVGQVLG*AVGLLV
Trigger: CACCAAGAGGCCTACGGCTCAGCCCAGCACCTGCCC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTCTGGTTCCTATAGGATaGGGGAGGCGTTGGGATGAA +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSLVPIG*GRRWDE
Trigger: TTCATCCCAACGCCTCCCTCATCCTATAGGAACCAG...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGATTGGACAGGCACCTaGCCCCAGGGTGGCTCACCC +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQDWTGT*PQGGSP
Trigger: GGGTGAGCCACCCTGGGGTCAGGTGCCTGTCCAATC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGCTTCCCTTGAGCCCTaGGGCTTGGCCTCCTGCGGA +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQASLEP*GLASCG
Trigger: TCCGCAGGAGGCCAAGCCTCAGGGCTCAAGGGAAGC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR GCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTAGCACTTTGGGGGATTaGTCTGCTGGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSSTLGD*SAGSEM
Trigger: CATCTCTGAGCCAGCAGAGCAATCCCCCAAAGTGCT...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGGAGCTGCTGACAAATaGAGCGGGTTAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSGAADK*SGLAES
Trigger: TGACTCTGCTAACCCGCTGCATTTGTCAGCAGCTCC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGAGCAAGTCTCTAGTTaGAGGAGGGGACCCATCACT +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSEQVSS*RRGPIT
Trigger: AGTGATGGGTCCCCTCCTGCAACTAGAGACTTGCTC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGCCAGTCGTGACCACTaGAGCCGATGCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCASRDH*SRCSRK
Trigger: CTTCCTGCTGCATCGGCTGCAGTGGTCACGACTGGC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTCCTCCAGCAGCATGTaGATCTGCTGCCTGACCTCG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQSSSSM*ICCLTS
Trigger: CGAGGTCAGGCAGCAGATGCACATGCTGCTGGAGGA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGAAGGAGGCGCTGTCGTaGAGCTGGGCCGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRKEALS*SWAGSG
Trigger: GCCCGAGCCGGCCCAGCTGCACGACAGCGCCTCCTT...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGAGGGGCACCGAATCTaGCCACTGGCTCGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHEGHRI*PLAREL
Trigger: GAGCTCCCGAGCCAGTGGGCAGATTCGGTGCCCCTC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCAACACTGCACAGGCTaGCACACTTGGCGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQQHCTG*HTWRGN
Trigger: GTTCCCTCGCCAAGTGTGGCAGCCTGTGCAGTGTTG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGTGTTTGTTCATTGCTaGCTCCTCAGGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSVFVHC*LLRALW
Trigger: CCAGAGAGCCCTGAGGAGGCAGCAATGAACAAACAC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGGACTGCTCTCCGAGTaGTGGCTGCTGCGTGGCATG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLGLLSE*WLLRGM
Trigger: CATGCCACGCAGCAGCCAGCACTCGGAGAGCAGTCC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGAAAGGGCGGGCCCTCTaGAATTCTCTGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQKGRAL*NSLELL
Trigger: CAGCAGCTCCAGAGAATTCCAGAGGGCCCGCCCTTT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGTGGGCATCTCCAGGTTaGTGGGGTTTGGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLWASPG*WGLGGR
Trigger: CCGGCCTCCCAAACCCCACCAACCTGGAGATGCCCA...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTCAGTGGGCGTGGCGTaGATGCTCTGGGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCSVGVA*MLWASP
Trigger: TGGAGATGCCCAGAGCATCCACGCCACGCCCACTGA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTTCTGCTCGCAATGGTaGCAACCGGGTGGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: PLWGRIERTTEGQSPVAVFCSQW*QPGGLH
Trigger: GTGAAGGCCACCCGGTTGCCACCATTGCGAGCAGAA...CACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGAGGCTGGGGATTCCATaGGGAGGCAAGTACTGCCAC +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSRLGIP*GGKYCH
Trigger: GTGGCAGTACTTGCCTCCCCATGGAATCCCCAGCCT...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGACCAAGGTGACTGCCTaGGAGGCATTGGACGTGCTC +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSTKVTA*EALDVL
Trigger: GAGCACGTCCAATGCCTCCCAGGCAGTCACCTTGGT...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGAGCGTCTCCCTGAGCTaGGCTTCCCTGATTCGTTGC +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSSVSLS*ASLIRC
Trigger: GCAACGAATCAGGGAAGCCCAGCTCAGGGAGACGCT...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCCGCTGTCCATTTCTTaGGGTGCTGAGAAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQPLSIS*GAEKPA
Trigger: TGCGGGCTTCTCAGCACCCCAAGAAATGGACAGCGG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGTCTTGGTGCCGGCTCTaGCCTGCGTGGCCCGCGGAT +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVSWCRL*PAWPAD
Trigger: ATCCGCGGGCCACGCAGGCCAGAGCCGGCACCAAGA...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTGTTGGCAGCTGGGATaGCGAACACTGCTGGCACCG +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCCWQLG*RTLLAP
Trigger: CGGTGCCAGCAGTGTTCGCCATCCCAGCTGCCAACA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGGCCTCGATGTACCCTaGGAGGGGCACCGAATCTGC +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLGLDVP*EGHRIC
Trigger: GCAGATTCGGTGCCCCTCCCAGGGTACATCGAGGCC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCTGGAGGGAGAGCTCTaGGGGTACCGTGATCGGGGG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQLEGEL*GYRDRG
Trigger: CCCCCGATCACGGTACCCCCAGAGCTCTCCCTCCAG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGGGGCTCAGGTTTCTTaGCTGGAGTCAGTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQGAQVS*LESVSP
Trigger: GGGAGACACTGACTCCAGCCAAGAAACCTGAGCCCC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGTGGTGGGGTGAGAAGTaGCTGGGGCAGCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLWWGEK*LGQLWP
Trigger: TGGCCAGAGCTGCCCCAGCCACTTCTCACCCCACCA...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCATTTCTTGGGGTGCTaGGAAGCCCGCAGCACTCTG +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCHFLGC*EARSTL
Trigger: CAGAGTGCTGCGGGCTTCTCAGCACCCCAAGAAATG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCCGGGTGGCCTTCACTaGGGCTGTAATGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCPGGLH*GCNGCQ
Trigger: CTGACATCCATTACAGCCTCAGTGAAGGCCACCCGG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTGGCGACGGTGCCGTTaGGGAATGTGCTCTGATTGC +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCWRRCR*GMCSDC
Trigger: GCAATCAGAGCACATTCCTCAACGGCACCGTCGCCA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGTTGCTGGGACATCATaGATAGCTGGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCVAGTS*IAGPGA
Trigger: AGCGCCTGGCCCAGCTATTCATGATGTCCCAGCAAC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCCTTCCTCTTGGCTTTaGGGCGCAGCTTGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQPSSWL*GAACSD
Trigger: ATCGGAACAAGCTGCGCCTCAAAGCCAAGAGGAAGG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGAGGCGGTGAGCCCATaGCCATCTCAGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHEAVSP*PSQEAG
Trigger: CCCAGCTTCCTGAGATGGTCATGGGCTCACCGCCTC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTACGGGTGGAGGCGGTaGGCCCATGACCATCTCAGG +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHYGWRR*AHDHLR
Trigger: CCTGAGATGGTCATGGGCTCACCGCCTCCACCCGTA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCTTGCTGCCGATGTCTaGGGTGGATCGCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCLAADV*GGSPER
Trigger: TCTCTCAGGCGATCCACCTCAGACATCGGCAGCAAG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGCTCTGGGGGTACCGTaGTCGGGGGTAGGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVALGVP*SGVGLD
Trigger: ATCGAGGCCTACCCCCGATCACGGTACCCCCAGAGC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGATTGGACAGGCACCTaGCCCCAGGGTGGCTCACCC +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVDWTGT*PQGGSP
Trigger: GGGTGAGCCACCCTGGGGTCAGGTGCCTGTCCAATC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCCTTGGGGGATGCTTTaGAATGGAGGAAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQPWGML*NGGSPC
Trigger: GCAGGGACTTCCTCCATTTCAAAGCATCCCCCAAGG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTCGGATGGGACAGTTCTaGCATGGGGCTCAAAAACCC +
Preference number: 4 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRRMGQF*HGAQKP
Trigger: GGGTTTTTGAGCCCCATGGCAGAACTGTCCCATCCG...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTAAGAAGACTTCCAAGTaGTGGGGGAGGGGGAGACGG +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCKKTSK*WGRGRR
Trigger: CCGTCTCCCCCTCCCCCAGCACTTGGAAGTCTTCTT...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGCTCGGCATCCTGGAATaGCTTCTGCAGCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSLGILE*LLQPLF
Trigger: GAACAGAGGCTGCAGAAGGCATTCCAGGATGCCGAG...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTGCAAAGCTCTGGTTGTaGAGGCCCACCAGCGAATTG +
Preference number: 4 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRAKLWL*RPTSEL
Trigger: CAATTCGCTGGTGGGCCTGCACAACCAGAGCTTTGC...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGAATGGGCGCCAGCACTaGAGCGATGATCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQNGRQH*SDDPQV
Trigger: AACCTGTGGATCATCGCTGCAGTGCTGGCGCCCATT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTACAGGCTTTGCTCTCTaGGGCAGGTTTATCATGGTG +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSTGFAL*GRFIMV
Trigger: CACCATGATAAACCTGCCGCAGAGAGCAAAGCCTGT...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTTTCGGTCAGACCCTTaGTCGTCTCCACTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQFRSDP*SSPLQG
Trigger: TCCCTGCAGTGGAGACGAGCAAGGGTCTGACCGAAA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTGCGTGGCCCGCGGATaGCAGGCTGAAGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYCVARG*QAEGLL
Trigger: GAGGAGGCCTTCAGCCTGGCATCCGCGGGCCACGCA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTCCAGGGAGGGCAACTTaGAACATCATGGTCACAAAG +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSPGRAT*NIMVTK
Trigger: CTTTGTGACCATGATGTTGCAAGTTGCCCTCCCTGG...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCGGCTGGTGCCTCAGTaGCGTGAGGCGATGTCCTCT +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQRLVPQ*REAMSS
Trigger: AGAGGACATCGCCTCACGGCACTGAGGCACCAGCCG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGAGCATGGACTCTGCTaGCTCACAGTGACACAAAGT +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSEHGLC*LTVTQS
Trigger: ACTTTGTGTCACTGTGAGGCAGCAGAGTCCATGCTC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTCTCCGAGTGCTGGCTaGTGCGTGGCATGGCATCCC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHSPSAG*CVAWHP
Trigger: GGGATGCCATGCCACGCAGCAGCCAGCACTCGGAGA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGGACTGCTCTCCGAGTaGTGGCTGCTGCGTGGCATG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQGLLSE*WLLRGM
Trigger: CATGCCACGCAGCAGCCAGCACTCGGAGAGCAGTCC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGAATGGAGGAAGTCCCTaGCCATACTGGCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQNGGSP*PYWLGW
Trigger: CCATCCCAGCCAGTATGGGCAGGGACTTCCTCCATT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTAAGACTTCCAAGTGCTaGGGGAGGGGGAGACGGATG +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCKTSKC*GRGRRM
Trigger: CATCCGTCTCCCCCTCCCCCAGCACTTGGAAGTCTT...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTCAGAGTCATTTGCAGTaGCAGAGGCTAGCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSQSHLQ*QRLAFC
Trigger: GCAGAAAGCTAGCCTCTGCCACTGCAAATGACTCTG...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGAATGGGAAGGCTGTATaGACTGCCCCTGGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSNGKAV*TAPGVL
Trigger: GAGGACACCAGGGGCAGTCCATACAGCCTTCCCATT...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp CATACAGACTCCTGGCCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGGCATCTCCAGGTTGGTaGGGTTTGGGAGGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: HTDSWPLWGRIERTTEGQASPGW*GLGGRC
Trigger: ACACCGGCCTCCCAAACCCCACCAACCTGGAGATGC...CTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCTCAGTGGGCGTGGCGTaGATGCTCTGGGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPSVGVA*MLWASP
Trigger: TGGAGATGCCCAGAGCATCCACGCCACGCCCACTGA...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTAGGCTGGGGATTCCATaGGGAGGCAAGTACTGCCAC +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCRLGIP*GGKYCH
Trigger: GTGGCAGTACTTGCCTCCCCATGGAATCCCCAGCCT...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTAGCGTCTCCCTGAGCTaGGCTTCCCTGATTCGTTGC +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCSVSLS*ASLIRC
Trigger: GCAACGAATCAGGGAAGCCCAGCTCAGGGAGACGCT...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTCGTCGATGGATGGCTaGGAGCTCAGTGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCSSMDG*ELSVEV
Trigger: GACCTCCACACTGAGCTCCCAGCCATCCATCGACGA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGGCCTCGATGTACCCTaGGAGGGGCACCGAATCTGC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHGLDVP*EGHRIC
Trigger: GCAGATTCGGTGCCCCTCCCAGGGTACATCGAGGCC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGGGGTGCAGGTTGGCTaGCTGGCTGTACTGACGAGG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQGVQVG*LAVLTR
Trigger: CCTCGTCAGTACAGCCAGCCAGCCAACCTGCACCCC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGGCTGGGGTGCAGGTTaGCTGGCTGGCTGTACTGAC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHGWGAG*LAGCTD
Trigger: GTCAGTACAGCCAGCCAGCCAACCTGCACCCCAGCC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGGCTGGGGTGCAGGTTaGCTGGCTGGCTGTACTGAC +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQGWGAG*LAGCTD
Trigger: GTCAGTACAGCCAGCCAGCCAACCTGCACCCCAGCC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTACAGAGGCTGCGGCCTaGGAAGACTGTGGTTCTACC +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCTEAAA*EDCGST
Trigger: GGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGT...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGACAGGCTGCCACACTTaGCGAGGGAACCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLTGCHT*RGNQSP
Trigger: GGGACTCTGGTTCCCTCGCCAAGTGTGGCAGCCTGT...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGGGGTGAGAAGTGGCTaGGGCAGCTCTGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHGVRSG*GSSGQS
Trigger: AGACTGGCCAGAGCTGCCCCAGCCACTTCTCACCCC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGGATGAGGGATGCCTATaGGATCCTGGGCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSDEGCL*DPGHFG
Trigger: CCCAAAATGCCCAGGATCTCATAGGCATCCCTCATC...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGGAGATGGGGAGGCATaGTTCTCTGTGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQGDGEA*FSVGWR
Trigger: CCTCCAGCCCACAGAGAATCATGCCTCCCCATCTCC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTTGTAATGATGGGAGATaGGACACTACCGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSCNDGR*DTTGAE
Trigger: TTCAGCACCGGTAGTGTCTCATCTCCCATCATTACA...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTAACCATGGTCATGTCTaGCTGTTGCACAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRNHGHV*LLHRLL
Trigger: GAGCAGCCTGTGCAACAGTCAGACATGACCATGGTT...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGAACCATGGTCATGTCTaGCTGTTGCACAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQNHGHV*LLHRLL
Trigger: GAGCAGCCTGTGCAACAGTCAGACATGACCATGGTT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTACATGTAGGTTGGTGTaGATGGGAAGGCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSTCRLV*MGRLYG
Trigger: TCCATACAGCCTTCCCATTCACACCAACCTACATGT...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCCCGGGTGGCCTTCACTaGGGCTGTAATGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPPGGLH*GCNGCQ
Trigger: CTGACATCCATTACAGCCTCAGTGAAGGCCACCCGG...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTCCAGAATGTCCACGTaGGCTGAGACATCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQSRMST*AETSFW
Trigger: CCAGAACGATGTCTCAGCTCACGTGGACATTCTGGA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTTTGAGGAATGTGCTCTaGTTGCCCACGACGTACACC +
Preference number: 4 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRLRNVL*LPTTYT
Trigger: GGTGTACGTCGTGGGCAATCAGAGCACATTCCTCAA...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTGGATTTGGCGGTCTTaGTGGTGCTTCCATCCTGAG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQWIWRS*WCFHPE
Trigger: CTCAGGATGGAAGCACCATCAAGACCGCCAAATCCA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGTGTGCATCTGCTGCCTaGCCTCGTCGATGGATGGCT +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLCASAA*PRRWMA
Trigger: AGCCATCCATCGACGAGGTCAGGCAGCAGATGCACA...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCTGAGGTGGATCGCCTaGGAGAAGCGACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHLRWIA*EKRQPQ
Trigger: CTGTGGCTGTCGCTTCTCTCAGGCGATCCACCTCAG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGAAAGACACCCCATTGTaGACTCTTCCAGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQKDTPL*TLPGTP
Trigger: TGGGGTGCCTGGAAGAGTGCACAATGGGGTGTCTTT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGCAATGTGACGGCAGCTaGTGCTGTTGGCTGTACCTT +
Preference number: 4 (lower is better)
Translates to: PLWGRIERTTEGQSPVAVQCDGS*CCWLYL
Trigger: AAGGTACAGCCAACAGCAGCAGCTGCCGTCACATTG...CACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGAAGTGTGGGGTGTGTTaGTTCAGGTCTGCAGTGACG +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSKCGVC*FRSAVT
Trigger: CGTCACTGCAGACCTGAAGCAACACACCCCACACTT...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGAACCGCCGGCCTTGTTaGTGGGACATCATGAATAGC +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQNRRPC*WDIMNS
Trigger: GCTATTCATGATGTCCCAGCAACAAGGCCGGCGGTT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGTCCTCATCTGCCCCTTaGTGGCCCAGGTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLSSSAP*WPRCCL
Trigger: CAAGCAACACCTGGGCCAGCAAGGGGCAGATGAGGA...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTTCTGGATCCAAAACATaGTCCATTTCCTTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSSGSKT*SISFGA
Trigger: AGCCCCGAAGGAAATGGAGCATGTTTTGGATCCAGA...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGTGCCGGCTCTGGCCTaGGTGGCCCGCGGATGCCAG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFVPALA*VARGCQ
Trigger: CTGGCATCCGCGGGCCACGCAGGCCAGAGCCGGCAC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGCGGCCATTCTGGTCTTaGTGCCGATGTCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLRPFWS*CRCLRW
Trigger: CCACCTCAGACATCGGCAGCAAGACCAGAATGGCCG...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGAGCTCATTCTCTCCTaGATAGGACATCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQELILS*IGHPGL
Trigger: CAGGCCTGGATGTCCTATGCAGGAGAGAATGAGCTC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATAGACGGGTCGTTTTCTaGCAGGCTCTGCTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHRRVVF*QALLRG
Trigger: GCCTCGCAGCAGAGCCTGGCAGAAAACGACCCGTCT...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTAGTCCCCAATCTCCCTaGTACACAAAGTCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSSPQSP*YTKSVA
Trigger: AGCTACTGACTTTGTGTAGCAGGGAGATTGGGGACT...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAACTAGGGGGCGAGGCTaGCGGGAACGGGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTTRGRG*RERGWR
Trigger: CCGCCACCCCCGTTCCCGGCAGCCTCGCCCCCTAGT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGATGGGGACCCTCTGTTaGGGACAGCTCGGAATGCCA +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLMGTLC*GQLGMP
Trigger: TGGCATTCCGAGCTGTCCCCAACAGAGGGTCCCCAT...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTCCAGCTTTGATCTGCTaGGTGGATGCAGGACCTGAA +
Preference number: 4 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRPALIC*VDAGPE
Trigger: TTCAGGTCCTGCATCCACCCAGCAGATCAAAGCTGG...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTTGCAGTCTGGAAAAGTaGAGGCTCAGCCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRCSLEK*RLSLMG
Trigger: ACCCATGAGGCTGAGCCTCCACTTTTCCAGACTGCA...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGCCGCCCCAGAAAGGATaGCTTGCTCTTGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLPPQKG*LALDPV
Trigger: CACTGGGTCAAGAGCAAGCCATCCTTTCTGGGGCGG...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGCCTCTGGCTTGGTGCTaGAAAAGCCAAGAGATGGGA +
Preference number: 4 (lower is better)
Translates to: PLWGRIERTTEGQSPVAVPLAWC*KSQEMG
Trigger: TCCCATCTCTTGGCTTTTCCAGCACCAAGCCAGAGG...CACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCAAGCCCGCAGCACTCTaGAGGAGGTCCTGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPKPAAL*RRSWER
Trigger: TCTTTCCCAGGACCTCCTCCAGAGTGCTGCGGGCTT...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGCAGGTTGGTGGGGTTTaGGAGGCCGGTGTGCATGGC +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVQVGGV*EAGVHG
Trigger: GCCATGCACACCGGCCTCCCAAACCCCACCAACCTG...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGTGGGCATCTCCAGGTTaGTGGGGTTTGGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVWASPG*WGLGGR
Trigger: CCGGCCTCCCAAACCCCACCAACCTGGAGATGCCCA...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGACTGTCAGTGGGCGTaGCGTGGATGCTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQDCQWA*RGCSGH
Trigger: ATGCCCAGAGCATCCACGCCACGCCCACTGACAGTC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGCTGCCTGGGAGGCATTaGACGTGCTCACAATCTGAA +
Preference number: 4 (lower is better)
Translates to: PLWGRIERTTEGQSPVAVLPGRH*TCSQSE
Trigger: TTCAGATTGTGAGCACGTCCAATGCCTCCCAGGCAG...CACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCTGCCTGGGAGGCATTaGACGTGCTCACAATCTGAA +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQLPGRH*TCSQSE
Trigger: TTCAGATTGTGAGCACGTCCAATGCCTCCCAGGCAG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCGCCGGCCTTGTTGCTaGGACATCATGAATAGCTGG +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCRRPCC*DIMNSW
Trigger: CCAGCTATTCATGATGTCCCAGCAACAAGGCCGGCG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGAGCGTCTCCCTGAGCTaGGCTTCCCTGATTCGTTGC +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLSVSLS*ASLIRC
Trigger: GCAACGAATCAGGGAAGCCCAGCTCAGGGAGACGCT...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTGTGCCATTACATTCTaGGGTGAGCGTCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSCAITF*GERLPE
Trigger: CTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTGTGCCATTACATTCTaGGGTGAGCGTCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQCAITF*GERLPE
Trigger: CTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTGACTCCTGGCCCTTGTaGGGCAGAATAGAAAGAACG +
Preference number: 4 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRDSWPL*GRIERT
Trigger: CGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTC...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGCAGAGCCATTCTCACTaGGCGACCTGCTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLQSHSH*ATCSSW
Trigger: CCAGGAAGAGCAGGTCGCCCAGTGAGAATGGCTCTG...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCAGCGGCCACCTTGCTaGAGTTGTCAAATAGAACCG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQQRPPC*SCQIEP
Trigger: CGGTTCTATTTGACAACTCCAGCAAGGTGGCCGCTG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGTCACCTGTCGAGACCTaGAATAGCCCCGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQSPVET*NSPGAQ
Trigger: CTGAGCCCCGGGGCTATTCCAGGTCTCGACAGGTGA...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGTCGTCGATGGATGGCTaGGAGCTCAGTGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLSSMDG*ELSVEV
Trigger: GACCTCCACACTGAGCTCCCAGCCATCCATCGACGA...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGTACTGATACATTTCTaGGCGGTAGGTCGGCACCCA +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQVLIHF*AVGRHP
Trigger: TGGGTGCCGACCTACCGCCCAGAAATGTATCAGTAC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGACTGACGAGGAAGCCTaGAGGGAGAGCTCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQTDEEA*RESSGG
Trigger: ACCCCCAGAGCTCTCCCTCCAGGCTTCCTCGTCAGT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGGGGCTCAGGTTTCTTaGCTGGAGTCAGTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLGAQVS*LESVSP
Trigger: GGGAGACACTGACTCCAGCCAAGAAACCTGAGCCCC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTGGGTAGGCAGCGGCTaGTGCCTCAGTGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRWVGSG*CLSAVR
Trigger: CCTCACGGCACTGAGGCACCAGCCGCTGCCTACCCA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTCTGTCTCCCCATGAGTaGGATAACATGAACAGACTG +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSLSPHE*DNMNRL
Trigger: CAGTCTGTTCATGTTATCCCACTCATGGGGAGACAG...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTAGCCTGCAGGCCACATaGCGAGATGGAAAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCSLQAT*RDGKQA
Trigger: TGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCT...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGCCATACTGGCTGGGATaGGGGGACAGCACTGAAGGA +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLPYWLG*GDSTEG
Trigger: TCCTTCAGTGCTGTCCCCCCATCCCAGCCAGTATGG...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTAACCATGGTCATGTCTaGCTGTTGCACAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCNHGHV*LLHRLL
Trigger: GAGCAGCCTGTGCAACAGTCAGACATGACCATGGTT...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATGTCAGCGCGGCCGTaGCTGTCAGTGGGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: QLFQRSAALVELVQEIASMSARP*LSVGVA
Trigger: CGCCACGCCCACTGACAGTCACGGCCGCGCTGACAT...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCCATTTTGCCAGTCGTaGCCACTGCAGCCGATGCAG +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHPFCQS*PLQPMQ
Trigger: CTGCATCGGCTGCAGTGGTCACGACTGGCAAAATGG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGAATGTCCACGTGAGCTaGGACATCGTTCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: PLWGRIERTTEGQSPVAVNVHVS*DIVLVE
Trigger: TTCCACCAGAACGATGTCTCAGCTCACGTGGACATT...CACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCCAGCACTGCAGCGATaGTCCACAGGTTATTGGGCG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQPALQR*STGYWA
Trigger: CGCCCAATAACCTGTGGATCATCGCTGCAGTGCTGG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTTGGAGCACAGAGTTCTaGATCTGGATCCAAAACATG +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSWSTEF*IWIQNM
Trigger: CATGTTTTGGATCCAGATTCAGAACTCTGTGCTCCA...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATGCTGGCTGGCTGTACTaGCGAGGAAGCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYAGWLY*RGSLEG
Trigger: TCCCTCCAGGCTTCCTCGTCAGTACAGCCAGCCAGC...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGGTGCCTCAGTGCCGTaGGGCGATGTCCTCTACCCA +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRGASVP*GDVLYP
Trigger: TGGGTAGAGGACATCGCCTCACGGCACTGAGGCACC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGCTGTTTTGCTTGCATTaGTGGGTAGGCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLLFCLH*WVGSGW
Trigger: CCAGCCGCTGCCTACCCATCAATGCAAGCAAAACAG...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCCAGGAGGTTGGGACTaGATCACTGGGCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHPGGWD*ITGPVT
Trigger: AGTGACTGGCCCAGTGATTCAGTCCCAACCTCCTGG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCACCTGATGTGCAAGTaGAGATGCCCCTTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQHLMCK*RCPFSL
Trigger: CAGAGAAAAGGGGCATCTTCACTTGCACATCAGGTG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTTTCCCGGGAGGAAATaGCTCTGGAGTCCGGGTGAC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHFPGRK*LWSPGD
Trigger: GTCACCCGGACTCCAGAGTCATTTCCTCCCGGGAAA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGTCCCAGCACGGTCTTaGTTCTGTCTGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHVPARS*FCLLLR
Trigger: CCTCAGCAGCAGACAGAATCAAGACCGTGCTGGGAC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR GCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAGAAGAGGTGTGTTCTaGCGAAAGGGCGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQRRGVF*RKGGPS
Trigger: AGAGGGCCCGCCCTTTCGGCAGAACACACCTCTTCT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGCCAGTCGTGACCACTaGAGCCGATGCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVASRDH*SRCSRK
Trigger: CTTCCTGCTGCATCGGCTGCAGTGGTCACGACTGGC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTAAGTGTGGGGTGTGTTaGTTCAGGTCTGCAGTGACG +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCKCGVC*FRSAVT
Trigger: CGTCACTGCAGACCTGAAGCAACACACCCCACACTT...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CATACAGACTCCTGGCCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGGTACACCAAGGTGACTaGCTGGGAGGCATTGGACGT +
Preference number: 4 (lower is better)
Translates to: HTDSWPLWGRIERTTEGQVHQGD*LGGIGR
Trigger: ACGTCCAATGCCTCCCAGGCAGTCACCTTGGTGTAC...CTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGCCTTGCACAGGCTTTaGTCTCTGCGGCAGGTTTAT +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCALHRL*SLRQVY
Trigger: ATAAACCTGCCGCAGAGAGCAAAGCCTGTGCAAGGC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGTGTTTGTTCATTGCTaGCTCCTCAGGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCVFVHC*LLRALW
Trigger: CCAGAGAGCCCTGAGGAGGCAGCAATGAACAAACAC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGACAATGGACCTTTACTaGACCTCCCCTGATGCAGAG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQTMDLY*TSPDAE
Trigger: CTCTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTCTCCGAGTGCTGGCTaGTGCGTGGCATGGCATCCC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRSPSAG*CVAWHP
Trigger: GGGATGCCATGCCACGCAGCAGCCAGCACTCGGAGA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGGGGGATTGCTCTGCTaGCTCAGAGATGATGGAATG +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCGGLLC*LRDDGM
Trigger: CATTCCATCATCTCTGAGCCAGCAGAGCAATCCCCC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTCGGCTGGAGCTGTTTaGGGAACTAACAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQSAGAV*GTNSTL
Trigger: CAAAGTGCTGTTAGTTCCCCAAACAGCTCCAGCCGA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATGGAGGGGGAGACGGATaGGACAGTTCTGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYGGGDG*DSSAMG
Trigger: CCCCATGGCAGAACTGTCCCATCCGTCTCCCCCTCC...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAAGACTTCCAAGTGCTaGGGGAGGGGGAGACGGATG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQKTSKC*GRGRRM
Trigger: CATCCGTCTCCCCCTCCCCCAGCACTTGGAAGTCTT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGCCTCTGCTGGAAGAGTaGGCATTTCTGGCACAGGAG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLPLLEE*AFLAQE
Trigger: CTCCTGTGCCAGAAATGCCCACTCTTCCAGCAGAGG...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGATGCTCTCACCTGTTTaGAAGCTGAAGCTGGCAACC +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSMLSPV*KLKLAT
Trigger: GGTTGCCAGCTTCAGCTTCCAAACAGGTGAGAGCAT...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAAGCCCGCAGCACTCTaGAGGAGGTCCTGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQKPAAL*RRSWER
Trigger: TCTTTCCCAGGACCTCCTCCAGAGTGCTGCGGGCTT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCTGTATGGACTGCCCCTaGTGTCCTCTTTGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPCMDCP*CPLWAR
Trigger: TCTGGCCCAAAGAGGACACCAGGGGCAGTCCATACA...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGGTGTGCATGGCTTGTaGTTTCCTGGGGAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCGVHGL*FPGEVS
Trigger: ACTTACCTCCCCAGGAAACCACAAGCCATGCACACC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGGGAGGCCGGTGTGCATaGCTTGTGGTTTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVGGRCA*LVVSWG
Trigger: TCCCCAGGAAACCACAAGCCATGCACACCGGCCTCC...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGCATCTCCAGGTTGGTaGGGTTTGGGAGGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVASPGW*GLGGRC
Trigger: ACACCGGCCTCCCAAACCCCACCAACCTGGAGATGC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGGTGGCGTGGATGCTCTaGGCATCTCCAGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVVAWML*ASPGWW
Trigger: CCACCAACCTGGAGATGCCCAGAGCATCCACGCCAC...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTTCTGCTCGCAATGGTaGCAACCGGGTGGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHFCSQW*QPGGLH
Trigger: GTGAAGGCCACCCGGTTGCCACCATTGCGAGCAGAA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTATCTGCACTCTCCTTTaGGTGAGAAAGAGAACTGTC +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSICTLL*VRKRTV
Trigger: GACAGTTCTCTTTCTCACCCAAAGGAGAGTGCAGAT...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCTGCCTGGGAGGCATTaGACGTGCTCACAATCTGAA +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCLPGRH*TCSQSE
Trigger: TTCAGATTGTGAGCACGTCCAATGCCTCCCAGGCAG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATACAGACTCCTGGCCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGGACATCATGAATAGCTaGGCCAGGCGCTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: HTDSWPLWGRIERTTEGQDIMNS*ARRCSM
Trigger: CATGGAGCAGCGCCTGGCCCAGCTATTCATGATGTC...CTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGCGCCGGCCTTGTTGCTaGGACATCATGAATAGCTGG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLRRPCC*DIMNSW
Trigger: CCAGCTATTCATGATGTCCCAGCAACAAGGCCGGCG...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGGTACATACAGACTCCTaGCCCTTGTGGGGCAGAATA +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSVHTDS*PLWGRI
Trigger: TATTCTGCCCCACAAGGGCCAGGAGTCTGTATGTAC...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGCATCTCGGTTTCCCCTaGACTCGGGCTGTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLHLGFP*TRAVQR
Trigger: TCTCTGAACAGCCCGAGTCCAGGGGAAACCGAGATG...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGTGGAGGTCTCCGAGTaGCCTTTCACCTGTCGAGAC +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQVEVSE*PFTCRD
Trigger: GTCTCGACAGGTGAAAGGCCACTCGGAGACCTCCAC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGACCTCGTCGATGGATaGCTGGGAGCTCAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHDLVDG*LGAQCG
Trigger: TCCACACTGAGCTCCCAGCCATCCATCGACGAGGTC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTGGTCCCCGGAGCGCTaGTCACCACCTCCGAATAGG +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRWSPER*SPPPNR
Trigger: CCTATTCGGAGGTGGTGACCAGCGCTCCGGGGACCA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACCCTGGGCCGCGTCATaGTCCCCGGAGCGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTPWAAS*SPERWS
Trigger: TGACCAGCGCTCCGGGGACCATGACGCGGCCCAGGG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAGGTCTGTTGGCAGCTaGGATGGCGAACACTGCTGG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQRSVGS*DGEHCW
Trigger: CCAGCAGTGTTCGCCATCCCAGCTGCCAACAGACCT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGGGGTGCAGGTTGGCTaGCTGGCTGTACTGACGAGG +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRGVQVG*LAVLTR
Trigger: CCTCGTCAGTACAGCCAGCCAGCCAACCTGCACCCC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGGCCACATGGCGAGATaGAAAGCAAGCAGGTTCGTG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLGHMAR*KASRFV
Trigger: CACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTCTCAAGCCACACAATaGACCTTTACTGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQSQATQ*TFTAPP
Trigger: GGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCCTTTAGGCCCCGGTTaGACCAGGGACTCGGTAGAA +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHPLGPG*TRDSVE
Trigger: TTCTACCGAGTCCCTGGTCCAACCGGGGCCTAAAGG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000658780.2
3UTR CAA 72 bp GTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCTaGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: VRTQGVHTDSWP*WGRIERTTEGQ
Trigger: CTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
3UTR CAA 72 bp CCCCAATCTCCCTGCTACACAAAGTCAGTAGCTGTTTaGCTTGCATTGATGGGTAGGCAGCGGCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PQSPCYTKSVAV*LALMGRQRLVP
Trigger: AGGCACCAGCCGCTGCCTACCCATCAATGCAAGCAAAACAGCTACTGACTTTGTGTAGCAGGGAGATTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCAGGCACCCCAGCTTTaGTCTGCTGGGTGGATGCAG +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRQAPQL*SAGWMQ
Trigger: CTGCATCCACCCAGCAGATCAAAGCTGGGGTGCCTG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGCATTTCTATGGCCCCTaGTTCTGCAGTCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PLWGRIERTTEGQSPVAVHFYGP*FCSLEK
Trigger: CTTTTCCAGACTGCAGAATCAGGGGCCATAGAAATG...CACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTGTAATGATGGGAGATaGGACACTACCGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSCNDGR*DTTGAE
Trigger: TTCAGCACCGGTAGTGTCTCATCTCCCATCATTACA...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGCTGTTGGAGCTAAATaGGTTTCCCAACTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQAVGAK*VSQLVV
Trigger: CACCACAAGTTGGGAAACTCATTTAGCTCCAACAGC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGCCGAGGACTAGATCCTaGATACTAAACCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSPRTRS*ILNPSA
Trigger: TGCAGAAGGGTTTAGTATTCAGGATCTAGTCCTCGG...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTGATTCAGCAGCAGAGTaGTATCCCAAGATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRDSAAE*YPKMFW
Trigger: CCAGAACATCTTGGGATATCACTCTGCTGCTGAATC...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCTCCTCAGAAACAATGTaGCGGCAGCTGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPSSETM*RQLLLL
Trigger: CAACAGCAGCAGCTGCCGTCACATTGTTTCTGAGGA...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCATGTCAGCGCGGCCGTaGCTGTCAGTGGGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFMSARP*LSVGVA
Trigger: CGCCACGCCCACTGACAGTCACGGCCGCGCTGACAT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTAATGTCCACGTGAGCTaGGACATCGTTCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCNVHVS*DIVLVE
Trigger: TTCCACCAGAACGATGTCTCAGCTCACGTGGACATT...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CATACAGACTCCTGGCCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGTCCAGAATGTCCACGTaGGCTGAGACATCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: HTDSWPLWGRIERTTEGQSRMST*AETSFW
Trigger: CCAGAACGATGTCTCAGCTCACGTGGACATTCTGGA...CTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCTCTGTTCCATTGTCTaGGCAAACTTGCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQLCSIV*ANLQDC
Trigger: ACAGTCCTGCAAGTTTGCTCAGACAATGGAACAGAG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGTGGCGACGGTGCCGTTaGGGAATGTGCTCTGATTGC +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVWRRCR*GMCSDC
Trigger: GCAATCAGAGCACATTCCTCAACGGCACCGTCGCCA...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTTAGCGGCGGATAGGTaGGGTAGAATCCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHLAADR*GRIPPA
Trigger: AGCTGGTGGGATTCTACCTCACCTATCCGCCGCTAA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGTCTCTGGTTGTTTCTaGTATGTCAAGGTTGGGATA +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSVSGCF*YVKVGI
Trigger: TATCCCAACCTTGACATATCAGAAACAACCAGAGAC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGCTCAGTGGCACAGACTaGACCCATGAAACTTATCAG +
Preference number: 4 (lower is better)
Translates to: PLWGRIERTTEGQSPVAVLSGTD*THETYQ
Trigger: CTGATAAGTTTCATGGGTTCAGTCTGTGCCACTGAG...CACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGATAGTGCTCGATGTCTaGCTTCTGCTTCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQIVLDV*LLLQGF
Trigger: AAAGCCCTGAAGCAGAAGTCAGACATCGAGCACTAT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGGGGCCATGCTTAAATaGCACGGCCCTGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRGAMLK*HGPASL
Trigger: CAAGGAGGCAGGGCCGTGTCATTTAAGCATGGCCCC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGTGTGCACCCTCACCTaGTGTGCAAGTGAAGATGCC +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQVCTLT*CASEDA
Trigger: GGCATCTTCACTTGCACATCAGGTGAGGGTGCACAC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGACTCTGGAGTCCGGGTaGCATTCATCTGTAGATTGT +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQTLESG*HSSVDC
Trigger: ACAATCTACAGATGAATGTCACCCGGACTCCAGAGT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGGGGACAGCTCGGAATaGCATTTTGTTGAGGATCCA +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCGDSSE*HFVEDP
Trigger: TGGATCCTCAACAAAATGGCATTCCGAGCTGTCCCC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATACCCCAGCTTTGATCTaGTGGGTGGATGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHTPALI*WVDAGP
Trigger: AGGTCCTGCATCCACCCAGCAGATCAAAGCTGGGGT...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCAAAGACACCCCATTGTaGACTCTTCCAGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPKDTPL*TLPGTP
Trigger: TGGGGTGCCTGGAAGAGTGCACAATGGGGTGTCTTT...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGAGAAGAGGTGTGTTCTaGCGAAAGGGCGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVRRGVF*RKGGPS
Trigger: AGAGGGCCCGCCCTTTCGGCAGAACACACCTCTTCT...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGAGAAGAGGTGTGTTCTaGCGAAAGGGCGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVRRGVF*RKGGPS
Trigger: AGAGGGCCCGCCCTTTCGGCAGAACACACCTCTTCT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTTTGGGAGGCCGGTGTaGATGGCTTGTGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHFGRPV*MACGFL
Trigger: CAGGAAACCACAAGCCATGCACACCGGCCTCCCAAA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTGGGCGTGGCGTGGATaGTCTGGGCATCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYWAWRG*SGHLQV
Trigger: AACCTGGAGATGCCCAGAGCATCCACGCCACGCCCA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTGGGCGTGGCGTGGATaGTCTGGGCATCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRWAWRG*SGHLQV
Trigger: AACCTGGAGATGCCCAGAGCATCCACGCCACGCCCA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTAGCATCTGTGTTTTCTaGTCGCAATGGTGGCAACCG +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCSICVF*SQWWQP
Trigger: CGGTTGCCACCATTGCGAGCAGAAAACACAGATGCT...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTGGGAGGCATTGGACGTaGTCACAATCTGAATTGTCA +
Preference number: 4 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRGRHWT*SQSELS
Trigger: TGACAATTCAGATTGTGAGCACGTCCAATGCCTCCC...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGCAAAGCTCTGGTTGTaGAGGCCCACCAGCGAATTG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQAKLWL*RPTSEL
Trigger: CAATTCGCTGGTGGGCCTGCACAACCAGAGCTTTGC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATAGCAGCATGTGCATCTaGTGCCTGACCTCGTCGATG +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHSSMCI*CLTSSM
Trigger: CATCGACGAGGTCAGGCAGCAGATGCACATGCTGCT...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAGCAGCATGTGCATCTaGTGCCTGACCTCGTCGATG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQSSMCI*CLTSSM
Trigger: CATCGACGAGGTCAGGCAGCAGATGCACATGCTGCT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGCCATTCTGGTCTTGCTaGCGATGTCTGAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLPFWSC*RCLRWI
Trigger: GATCCACCTCAGACATCGGCAGCAAGACCAGAATGG...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGAGCTCATTCTCTCCTaGATAGGACATCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLELILS*IGHPGL
Trigger: CAGGCCTGGATGTCCTATGCAGGAGAGAATGAGCTC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTCTGCCAGGCTCTGCTaGGAGGCCGCTGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFSARLC*EAAVEG
Trigger: GCCCTCCACAGCGGCCTCGCAGCAGAGCCTGGCAGA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTCTGCCAGGCTCTGCTaGGAGGCCGCTGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDSARLC*EAAVEG
Trigger: GCCCTCCACAGCGGCCTCGCAGCAGAGCCTGGCAGA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTTTTCTGCCAGGCTCTaGTGCGAGGCCGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYFSARL*CEAAVE
Trigger: CTCCACAGCGGCCTCGCAGCAGAGCCTGGCAGAAAA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATAGACGGGTCGTTTTCTaGCAGGCTCTGCTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYRRVVF*QALLRG
Trigger: GCCTCGCAGCAGAGCCTGGCAGAAAACGACCCGTCT...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGGTCTTGCCCACTCATaGTCCTTCTTCTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLGLAHS*SFFWVP
Trigger: TGGTACCCAGAAGAAGGAGCATGAGTGGGCAAGACC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTGGTTTTCTTATCCATaGAAGTGTGTGGCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQWFSYP*KCVAVS
Trigger: GCTCACGGCCACACACTTGCATGGATAAGAAAACCA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGGGGGATTGCTCTGCTaGCTCAGAGATGATGGAATG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLGGLLC*LRDDGM
Trigger: CATTCCATCATCTCTGAGCCAGCAGAGCAATCCCCC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGAACTAACAGCACTTTaGGGGATTGCTCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCELTAL*GIALLA
Trigger: AGCCAGCAGAGCAATCCCCCAAAGTGCTGTTAGTTC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGATGCCTATGAGATCCTaGGCATTTTGGGATGCAGTG +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSMPMRS*AFWDAV
Trigger: CACTGCATCCCAAAATGCCCAGGATCTCATAGGCAT...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGATGCCTATGAGATCCTaGGCATTTTGGGATGCAGTG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQMPMRS*AFWDAV
Trigger: CACTGCATCCCAAAATGCCCAGGATCTCATAGGCAT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTCAAAAACCCAGGTGTaGATGAACCTGCTGAATGGG +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSSKTQV*MNLLNG
Trigger: CCCATTCAGCAGGTTCATCCACACCTGGGTTTTTGA...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGTGCAGTCTGGAAAAGTaGAGGCTCAGCCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLCSLEK*RLSLMG
Trigger: ACCCATGAGGCTGAGCCTCCACTTTTCCAGACTGCA...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTGCTGGTCATTTCTATaGCCCCTGATTCTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQCWSFL*PLILQS
Trigger: AGACTGCAGAATCAGGGGCCATAGAAATGACCAGCA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGAAAGGGCGGGCCCTCTaGAATTCTCTGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVKGRAL*NSLELL
Trigger: CAGCAGCTCCAGAGAATTCCAGAGGGCCCGCCCTTT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAAGAGTGGGCATTTCTaGCACAGGAGATGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQKSGHF*HRRWGG
Trigger: GCCTCCCCATCTCCTGTGCCAGAAATGCCCACTCTT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCATCACTGCCCTCTGCTaGAAGAGTGGGCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPITALC*KSGHFW
Trigger: CCAGAAATGCCCACTCTTCCAGCAGAGGGCAGTGAT...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGATCACTGCCCTCTGCTaGAAGAGTGGGCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLITALC*KSGHFW
Trigger: CCAGAAATGCCCACTCTTCCAGCAGAGGGCAGTGAT...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCGGCCGTGACTGTCAGTaGGCGTGGCGTGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLIGRDCQ*AWRGCS
Trigger: AGAGCATCCACGCCACGCCCACTGACAGTCACGGCC...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGTTTTCTGCTCGCAATaGTGGCAACCGGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQVFCSQ*WQPGGL
Trigger: AAGGCCACCCGGTTGCCACCATTGCGAGCAGAAAAC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTCACCAGGAGCTTACTaGACATCTGACACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCSPGAY*TSDTPG
Trigger: ACCTGGAGTGTCAGATGTCCAGTAAGCTCCTGGTGA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTTCCTCTCGGCATCCTaGAATGCCTTCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHFLSAS*NAFCSL
Trigger: GAGGCTGCAGAAGGCATTCCAGGATGCCGAGAGGAA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGACCAAGGTGACTGCCTaGGAGGCATTGGACGTGCTC +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVTKVTA*EALDVL
Trigger: GAGCACGTCCAATGCCTCCCAGGCAGTCACCTTGGT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTCTGATATGTCAAGGTTaGGATATTCCAGTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSLICQG*DIPVVQ
Trigger: CTGAACCACTGGAATATCCCAACCTTGACATATCAG...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCACCCGGGCAAAGCTCTaGTTGTGCAGGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: AVISEICCLSGTGARNCVTRAKL*LCRPTS
Trigger: GCTGGTGGGCCTGCACAACCAGAGCTTTGCCCGGGT...GACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGACATCATGAATAGCTaGGCCAGGCGCTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQDIMNS*ARRCSM
Trigger: CATGGAGCAGCGCCTGGCCCAGCTATTCATGATGTC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAATGGGTCCTTCGGGCCTaGGACACGCTGCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKWVLRA*DTLHLH
Trigger: GTGAAGATGCAGCGTGTCCCAGGCCCGAAGGACCCA...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGTGGTGCTCAGGATCTTaGCAGCTGCGGTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVWCSGS*QLRSPT
Trigger: TGTTGGGGACCGCAGCTGCCAAGATCCTGAGCACCA...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGCGACCTGCTCTTCCTaGTTTCAGTGGATTTGGCGG +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHATCSS*FQWIWR
Trigger: CCGCCAAATCCACTGAAACCAGGAAGAGCAGGTCGC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATACCGAATCTGCCCACTaGCTCGGGAGCTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHTESAH*LGSSFS
Trigger: AGAGAATGAGCTCCCGAGCCAGTGGGCAGATTCGGT...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATACTGACGAGGAAGCCTaGAGGGAGAGCTCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYTDEEA*RESSGG
Trigger: ACCCCCAGAGCTCTCCCTCCAGGCTTCCTCGTCAGT...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGTCACAAGGGCCGCAGTaGAGATGTTGGTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVSQGPQ*RCWSGE
Trigger: CTCCCCTGACCAACATCTCCACTGCGGCCCTTGTGA...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTGTATCAATAACTGGTaGTGGGGTGAGAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQCINNW*WGEKWL
Trigger: CAGCCACTTCTCACCCCACCACCAGTTATTGATACA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGGGGATGCTTTGAAATaGAGGAAGTCCCTGCCCATA +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCGDALK*RKSLPI
Trigger: TATGGGCAGGGACTTCCTCCATTTCAAAGCATCCCC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGGGAGATGGGGAGGCATaGTTCTCTGTGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIAGDGEA*FSVGWR
Trigger: CCTCCAGCCCACAGAGAATCATGCCTCCCCATCTCC...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCACCTGTTTGGAAGCTaGAGCTGGCAACCCAGAATG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQHLFGS*SWQPRM
Trigger: CATTCTGGGTTGCCAGCTTCAGCTTCCAAACAGGTG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGCCCTTCTGCAGTCACTaGATGCCCAGCAGTATCTTT +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLPFCSH*MPSSIF
Trigger: AAAGATACTGCTGGGCATTCAGTGACTGCAGAAGGG...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGTCCTCAGAAACAATGTaGCGGCAGCTGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQSSETM*RQLLLL
Trigger: CAACAGCAGCAGCTGCCGTCACATTGTTTCTGAGGA...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGCGACGTACACCAAGGTaGCTGCCTGGGAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIARRTPR*LPGRHW
Trigger: CCAATGCCTCCCAGGCAGTCACCTTGGTGTACGTCG...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCCAGGCGCTGCTCCATaGCCCGGGCAAAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDPGAAP*PGQSSG
Trigger: ACCAGAGCTTTGCCCGGGTCATGGAGCAGCGCCTGG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATCCAGCACTGCAGCGATaGTCCACAGGTTATTGGGCG +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYPALQR*STGYWA
Trigger: CGCCCAATAACCTGTGGATCATCGCTGCAGTGCTGG...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGCGACGTCTCTTTCCTaGGGAGCATCTCTAATGGGC +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVATSLS*GASLMG
Trigger: GCCCATTAGAGATGCTCCTCAGGAAAGAGACGTCGC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTGGATTTGGCGGTCTTaGTGGTGCTTCCATCCTGAG +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHWIWRS*WCFHPE
Trigger: CTCAGGATGGAAGCACCATCAAGACCGCCAAATCCA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCTGGTTCCTATAGGATaGGGGAGGCGTTGGGATGAA +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQLVPIG*GRRWDE
Trigger: TTCATCCCAACGCCTCCCTCATCCTATAGGAACCAG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGCGCACGGTCATGGTTaGATGAGAATACAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLAHGHG*MRIQSG
Trigger: ACCAGACTGTATTCTCATTCAACCATGACCGTGCGC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGCTGTTTTGCTTGCATTaGTGGGTAGGCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVLFCLH*WVGSGW
Trigger: CCAGCCGCTGCCTACCCATCAATGCAAGCAAAACAG...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTGGGATCCTTGGTGCTaGGACAGGAATGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYWDPWC*DRNAPP
Trigger: TGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCGAGGGGACCCATCACTaGCCTCTGCTGGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLIEGTHH*PLLEEW
Trigger: CCACTCTTCCAGCAGAGGGCAGTGATGGGTCCCCTC...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATATGGTCCACAGCAGCTaGATAAGCCTCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHMVHSS*ISLWLG
Trigger: ACCAAGCCAGAGGCTTATGCAGCTGCTGTGGACCAT...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGACTGTTGCACAGGCTaGTCAATGCTTGTACCGAGG +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHDCCTG*SMLVPR
Trigger: CCTCGGTACAAGCATTGAGCAGCCTGTGCAACAGTC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTGGAATGGTTGTTATTaGTTGTGGGCCAGAGGTCTA +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQWNGCY*LWARGL
Trigger: TAGACCTCTGGCCCACAAGCAATAACAACCATTCCA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGGAAGGCTGTATGGACTaGCCCTGGTGTCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVEGCMD*PWCPLW
Trigger: CCAAAGAGGACACCAGGGGCAGTCCATACAGCCTTC...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGAAGGCTGTATGGACTaGCCCTGGTGTCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVEGCMD*PWCPLW
Trigger: CCAAAGAGGACACCAGGGGCAGTCCATACAGCCTTC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCGCATGGCTGTATGTGTaGTCGTGGTATGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPAWLYV*SWYVLF
Trigger: GAACAGGACATACCACGAGCACACATACAGCCATGC...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGTGTCCATGTTTCCTTaGATGGCTGTATGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCVSMFP*MAVCVL
Trigger: GAGCACACATACAGCCATGCAAGGAAACATGGACAC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGTTTGGGAGGCCGGTGTaGATGGCTTGTGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVFGRPV*MACGFL
Trigger: CAGGAAACCACAAGCCATGCACACCGGCCTCCCAAA...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGTTTGGGAGGCCGGTGTaGATGGCTTGTGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVFGRPV*MACGFL
Trigger: CAGGAAACCACAAGCCATGCACACCGGCCTCCCAAA...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTTGTCTGAGCAAACTTaGAGGACTGTATGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQLSEQT*RTVCCP
Trigger: CGGACAACATACAGTCCTGCAAGTTTGCTCAGACAA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGCAAAGCTCTGGTTGTaGAGGCCCACCAGCGAATTG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVAKLWL*RPTSEL
Trigger: CAATTCGCTGGTGGGCCTGCACAACCAGAGCTTTGC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAACCGCCGGCCTTGTTaGTGGGACATCATGAATAGC +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQNRRPC*WDIMNS
Trigger: GCTATTCATGATGTCCCAGCAACAAGGCCGGCGGTT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGGGCCTGGGACACGCTaGATCTTCACCATCTGCACA +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRGPGTR*IFTICT
Trigger: TGTGCAGATGGTGAAGATGCAGCGTGTCCCAGGCCC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATGGGCCTGGGACACGCTaGATCTTCACCATCTGCACA +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYGPGTR*IFTICT
Trigger: TGTGCAGATGGTGAAGATGCAGCGTGTCCCAGGCCC...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGAGGGGCACCGAATCTaGCCACTGGCTCGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFEGHRI*PLAREL
Trigger: GAGCTCCCGAGCCAGTGGGCAGATTCGGTGCCCCTC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGCCAGGGAGGGCAACTTaGAACATCATGGTCACAAAG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLPGRAT*NIMVTK
Trigger: CTTTGTGACCATGATGTTGCAAGTTGCCCTCCCTGG...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCAACACTGCACAGGCTaGCACACTTGGCGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRQHCTG*HTWRGN
Trigger: GTTCCCTCGCCAAGTGTGGCAGCCTGTGCAGTGTTG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGTAAGCCCCCAACACTaGACAGGCTGCCACACTTGG +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRVSPQH*TGCHTW
Trigger: CCAAGTGTGGCAGCCTGTGCAGTGTTGGGGGCTTAC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGAGCATGGACTCTGCTaGCTCACAGTGACACAAAGT +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLEHGLC*LTVTQS
Trigger: ACTTTGTGTCACTGTGAGGCAGCAGAGTCCATGCTC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTTCTGTAGGTAACAGCTaGCATCTTATTATGCACAAG +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSSVGNS*HLIMHK
Trigger: CTTGTGCATAATAAGATGGCAGCTGTTACCTACAGA...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGAAAGAGGAAACTCCTTaGTCTGTAGGTAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQKEETP*SVGNSC
Trigger: GCAGCTGTTACCTACAGAGCAAGGAGTTTCCTCTTT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGAGGGTTTCTAGTCCTTaGAAAACTCCTTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQRVSSP*KTPCLE
Trigger: TTCCAGGCAAGGAGTTTTGCAAGGACTAGAAACCCT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCCGAGTGCTGGCTGCTaGGTGGCATGGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFPSAGC*VAWHPR
Trigger: CCTGGGATGCCATGCCACGCAGCAGCCAGCACTCGG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTATGCCTATGAGATCCTaGGCATTTTGGGATGCAGTG +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCMPMRS*AFWDAV
Trigger: CACTGCATCCCAAAATGCCCAGGATCTCATAGGCAT...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGGGACAGTTCTGCCATaGGGCTCAAAAACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVGTVLP*GSKTQV
Trigger: CACCTGGGTTTTTGAGCCCCATGGCAGAACTGTCCC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCCAGCTTTGATCTGCTaGGTGGATGCAGGACCTGAA +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHPALIC*VDAGPE
Trigger: TTCAGGTCCTGCATCCACCCAGCAGATCAAAGCTGG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCCTGATTCTGCAGTCTaGAAAAGTGGAGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQPDSAV*KSGGSA
Trigger: GGCTGAGCCTCCACTTTTCCAGACTGCAGAATCAGG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAAAAAGGGCGGGCCCTCTaGAATTCTCTGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKKGRAL*NSLELL
Trigger: CAGCAGCTCCAGAGAATTCCAGAGGGCCCGCCCTTT...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTTCCTTGGAAAGGCCTaGAGAGGAATCGTCACATTT +
Preference number: 4 (lower is better)
Translates to: CAITFWGERLPELGFPDSFLGKA*RGIVTF
Trigger: AAATGTGACGATTCCTCTCCAGGCCTTTCCAAGGAA...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGAATCATATACATCCATaGAGGAGGGCGATGCTCTCA +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQNHIHP*RRAMLS
Trigger: TGAGAGCATCGCCCTCCTCCATGGATGTATATGATT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTAACATCTGTGGTTGCTaGCTTTTTCATGTCTCCTAT +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSNICGC*LFHVSY
Trigger: ATAGGAGACATGAAAAAGCCAGCAACCACAGATGTT...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTAATCCTGAGATTTTATaGCATCGGCAGCTGAAGTTA +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSNPEIL*HRQLKL
Trigger: TAACTTCAGCTGCCGATGCCATAAAATCTCAGGATT...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGTAGGTTGGTGTGAATaGGAAGGCTGTATGGACTGC +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLVGWCE*EGCMDC
Trigger: GCAGTCCATACAGCCTTCCCATTCACACCAACCTAC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGCATACATGTAGGTTaGTGTGAATGGGAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PLWGRIERTTEGQSPVAVCIHVG*CEWEGC
Trigger: ACAGCCTTCCCATTCACACCAACCTACATGTATGCA...CACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGGTGTGCATGGCTTGTaGTTTCCTGGGGAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHGVHGL*FPGEVS
Trigger: ACTTACCTCCCCAGGAAACCACAAGCCATGCACACC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGAGACATCGTTCTGGTaGAAAGCCTTCCGCAATGCC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHETSFW*KAFRNA
Trigger: GGCATTGCGGAAGGCTTTCCACCAGAACGATGTCTC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTGGTGCTCAGGATCTTaGCAGCTGCGGTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYWCSGS*QLRSPT
Trigger: TGTTGGGGACCGCAGCTGCCAAGATCCTGAGCACCA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTGGTGCTCAGGATCTTaGCAGCTGCGGTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRWCSGS*QLRSPT
Trigger: TGTTGGGGACCGCAGCTGCCAAGATCCTGAGCACCA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCCGCTGTCCATTTCTTaGGGTGCTGAGAAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRPLSIS*GAEKPA
Trigger: TGCGGGCTTCTCAGCACCCCAAGAAATGGACAGCGG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGTGGAGGTCTCCGAGTaGCCTTTCACCTGTCGAGAC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRVEVSE*PFTCRD
Trigger: GTCTCGACAGGTGAAAGGCCACTCGGAGACCTCCAC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGTACTGATACATTTCTaGGCGGTAGGTCGGCACCCA +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHVLIHF*AVGRHP
Trigger: TGGGTGCCGACCTACCGCCCAGAAATGTATCAGTAC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATAGGTCTGTTGGCAGCTaGGATGGCGAACACTGCTGG +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYRSVGS*DGEHCW
Trigger: CCAGCAGTGTTCGCCATCCCAGCTGCCAACAGACCT...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGACCGAATCTGCCCACTaGCTCGGGAGCTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVTESAH*LGSSFS
Trigger: AGAGAATGAGCTCCCGAGCCAGTGGGCAGATTCGGT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCCACCTCCTCCCGGATaGCCTTCACAAGGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFPPPPG*PSQGPQ
Trigger: CTGCGGCCCTTGTGAAGGCCATCCGGGAGGAGGTGG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGGCCTGGGAAGACTGTaGTTCTACCACTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQGLGRL*FYHSCF
Trigger: GAAACAGGAGTGGTAGAACCACAGTCTTCCCAGGCC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGCAAAACTCCTTGCCTaGAACACCTTTGAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCAKLLA*NTFEVG
Trigger: TCCAACCTCAAAGGTGTTCCAGGCAAGGAGTTTTGC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCTAGTCAGAGCGTGGTaGGTACTGAAAAGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCLVRAW*VLKRKG
Trigger: ACCTTTCCTTTTCAGTACCCACCACGCTCTGACTAG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGGATTAGCTATGTTCTaGCCTAAAGAGGGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQGLAMF*PKEGSA
Trigger: AGCCGACCCCTCTTTAGGTCAGAACATAGCTAATCC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCCAGAAACACCTAGATaGGGGATGCCTATGAGATCC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHPETPR*GMPMRS
Trigger: GGATCTCATAGGCATCCCTCATCTAGGTGTTTCTGG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGATTCAGCAGCAGAGTaGTATCCCAAGATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLDSAAE*YPKMFW
Trigger: CCAGAACATCTTGGGATATCACTCTGCTGCTGAATC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGCTCTTAGCTGGTCCTaGGGCCACGGCCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDALSWS*GHGQRA
Trigger: AGCCCTTTGGCCGTGGCCTCAGGACCAGCTAAGAGC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCACTTCAAGGATTCACTaGTCTGCACTCTCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPTSRIH*SALSFG
Trigger: CCCAAAGGAGAGTGCAGATCAGTGAATCCTTGAAGT...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGACTTCAAGGATTCACTaGTCTGCACTCTCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLTSRIH*SALSFG
Trigger: CCCAAAGGAGAGTGCAGATCAGTGAATCCTTGAAGT...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGCTCTGTTCCATTGTCTaGGCAAACTTGCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLLCSIV*ANLQDC
Trigger: ACAGTCCTGCAAGTTTGCTCAGACAATGGAACAGAG...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCCCAGCACTGCAGCGATaGTCCACAGGTTATTGGGCG +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLIPALQR*STGYWA
Trigger: CGCCCAATAACCTGTGGATCATCGCTGCAGTGCTGG...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGTCATGGTGTCAGGCTTaGAGTCGTTCTTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLSWCQA*SRSCSS
Trigger: GGAAGAACAAGAACGACTTCAAGCCTGACACCATGA...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGAGGCGGTGAGCCCATaGCCATCTCAGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTEAVSP*PSQEAG
Trigger: CCCAGCTTCCTGAGATGGTCATGGGCTCACCGCCTC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGCTGGCTGGCTGTACTaGCGAGGAAGCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFAGWLY*RGSLEG
Trigger: TCCCTCCAGGCTTCCTCGTCAGTACAGCCAGCCAGC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGGTGCCTCAGTGCCGTaGGGCGATGTCCTCTACCCA +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDGASVP*GDVLYP
Trigger: TGGGTAGAGGACATCGCCTCACGGCACTGAGGCACC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGAAAAGTCTGTGCATTaGCAGTTTGAACCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCEKSVH*QFEPPL
Trigger: AAGGGGAGGTTCAAACTGTCAATGCACAGACTTTTC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGCAGGACAATGTAGCTaGTTTTATCAGACTCATACC +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQAGQCS*FYQTHT
Trigger: GGTATGAGTCTGATAAAATCAGCTACATTGTCCTGC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTTCAGACACTGTCTTCTaGAACATTTACGTATACTTC +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSSDTVF*NIYVYF
Trigger: GAAGTATACGTAAATGTTTCAGAAGACAGTGTCTGA...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCTGGGACCAGGGAATTaGTTCTTACATAATCTACCC +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCLGPGN*FLHNLP
Trigger: GGGTAGATTATGTAAGAATCAATTCCCTGGTCCCAG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATGCAAGTGTGTGGCCGTaGGCCACATTAGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYASVWP*ATLVAP
Trigger: AGGTGCTACTAATGTGGCTCACGGCCACACACTTGC...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTTCTCAGTTTGTGTGTaGGATGGGGGCGTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCFSVCV*DGGVFK
Trigger: TTTAAACACGCCCCCATCTCACACACAAACTGAGAA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGATTCTGTCTGCTGCTaGGGAAGACCTGACTTCTGT +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHDSVCC*GRPDFC
Trigger: ACAGAAGTCAGGTCTTCCTCAGCAGCAGACAGAATC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCATGGAGGAGGGCGATaGTCTCACCTGTTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRHGGGR*SHLFGS
Trigger: GCTTCCAAACAGGTGAGAGCATCGCCCTCCTCCATG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCCTCTTTGGGCCAGATaGGGCCTTGTTTGTGACATT +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHPLWAR*GLVCDI
Trigger: AATGTCACAAACAAGGCCGCATCTGGCCCAAAGAGG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAGCCAGTCGTGACCACTaGAGCCGATGCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QLFQRSAALVELVQEIASASRDH*SRCSRK
Trigger: CTTCCTGCTGCATCGGCTGCAGTGGTCACGACTGGC...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp CATACAGACTCCTGGCCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGGCTTGGCTCACAAACTaGAGCACTGTTTTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: HTDSWPLWGRIERTTEGQAWLTN*STVFSW
Trigger: CCAGCTAAAAACAGTGCTGCAGTTTGTGAGCCAAGC...CTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCTCGGCATCCTGGAATaGCTTCTGCAGCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRLGILE*LLQPLF
Trigger: GAACAGAGGCTGCAGAAGGCATTCCAGGATGCCGAG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGGAATGTGCTCTGATTaGCCACGACGTACACCAAGG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVGMCSD*PRRTPR
Trigger: CCTTGGTGTACGTCGTGGGCAATCAGAGCACATTCC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGGGGCCTGGGACACGCTaGATCTTCACCATCTGCACA +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIAGPGTR*IFTICT
Trigger: TGTGCAGATGGTGAAGATGCAGCGTGTCCCAGGCCC...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCAGGATCTTGGCAGCTaGGGTCCCCAACAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRQDLGS*GPQQRL
Trigger: AAGCCTTTGTTGGGGACCGCAGCTGCCAAGATCCTG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTGGGCGACCTGCTTTaGTCTCTGCGGCAGGTTTAT +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKLGDLL*SLRQVY
Trigger: ATAAACCTGCCGCAGAGAGCAAAGCAGGTCGCCCAG...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCACATTTCTCTTCCTTaGCTCCTCCTTTGTCACTTT +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQHISLP*LLLCHF
Trigger: AAAGTGACAAAGGAGGAGGCAAGGAAGAGAAATGTG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCTTGCTCGTCTCCACTaGAGGGAAGTCGTAATATCC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHLARLH*REVVIS
Trigger: GGATATTACGACTTCCCTGCAGTGGAGACGAGCAAG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGGGCCTCTGGACATCTaGGTGAAGGAGGCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDGPLDI*VKEALS
Trigger: CGACAGCGCCTCCTTCACGCAGATGTCCAGAGGCCC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTTCTTTGAAAAGTCTGTaGATTGACAGTTTGAACCTC +
Preference number: 4 (lower is better)
Translates to: PCLPVGILGAETGMHPHSSLKSL*IDSLNL
Trigger: GAGGTTCAAACTGTCAATGCACAGACTTTTCAAAGA...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGGAGGGGGAGACGGATaGGACAGTTCTGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDGGGDG*DSSAMG
Trigger: CCCCATGGCAGAACTGTCCCATCCGTCTCCCCCTCC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGAAGACTTCCAAGTGCTaGGGGAGGGGGAGACGGATG +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIAKTSKC*GRGRRM
Trigger: CATCCGTCTCCCCCTCCCCCAGCACTTGGAAGTCTT...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCCCGCCCCAGAAAGGATaGCTTGCTCTTGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLIPPQKG*LALDPV
Trigger: CACTGGGTCAAGAGCAAGCCATCCTTTCTGGGGCGG...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATAAGAGTGGGCATTTCTaGCACAGGAGATGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYKSGHF*HRRWGG
Trigger: GCCTCCCCATCTCCTGTGCCAGAAATGCCCACTCTT...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTTCCTTGGAAAGGCCTaGAGAGGAATCGTCACATTT +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCFLGKA*RGIVTF
Trigger: AAATGTGACGATTCCTCTCCAGGCCTTTCCAAGGAA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATACAGACTCCTGGCCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGGGAAAACAGTCTGGGTaGCTTGTATGGAGAGTATGG +
Preference number: 4 (lower is better)
Translates to: HTDSWPLWGRIERTTEGQGKQSG*LVWRVW
Trigger: CCATACTCTCCATACAAGCCACCCAGACTGTTTTCC...CTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCATAAGCCTCTGGCTTaGTGCTGGAAAAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQHKPLA*CWKSQE
Trigger: CTCTTGGCTTTTCCAGCACCAAGCCAGAGGCTTATG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATATGCTCTCACCTGTTTaGAAGCTGAAGCTGGCAACC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHMLSPV*KLKLAT
Trigger: GGTTGCCAGCTTCAGCTTCCAAACAGGTGAGAGCAT...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGGTTGTTATTGCTTGTaGGCCAGAGGTCTATATGGC +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLGCYCL*ARGLYG
Trigger: GCCATATAGACCTCTGGCCCACAAGCAATAACAACC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTGGAAGTCTCTGGAATaGTTGTTATTGCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCWKSLE*LLLLVG
Trigger: GCCCACAAGCAATAACAACCATTCCAGAGACTTCCA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGATGTGCTGGCTGGTTaGGCAACTGTAGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVDVLAG*ATVAED
Trigger: ATCCTCAGCTACAGTTGCCCAACCAGCCAGCACATC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGCAAGATGTTCTGGAATaGTGTGGAAGCATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PLWGRIERTTEGQSPVAVQDVLE*CGSISL
Trigger: GAGAGAAATGCTTCCACACCATTCCAGAACATCTTG...CACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCAAGATGTTCTGGAATaGTGTGGAAGCATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQQDVLE*CGSISL
Trigger: GAGAGAAATGCTTCCACACCATTCCAGAACATCTTG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCCCCTGGTGTCCTCTTTaGGCCAGATGCGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: AVISEICCLSGTGARNCVPWCPL*ARCGLV
Trigger: AACAAGGCCGCATCTGGCCCAAAGAGGACACCAGGG...GACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATAATGGGAAGGCTGTATaGACTGCCCCTGGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYNGKAV*TAPGVL
Trigger: GAGGACACCAGGGGCAGTCCATACAGCCTTCCCATT...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTGCATACATGTAGGTTaGTGTGAATGGGAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCCIHVG*CEWEGC
Trigger: ACAGCCTTCCCATTCACACCAACCTACATGTATGCA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCAGGTTGGTGGGGTTTaGGAGGCCGGTGTGCATGGC +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDQVGGV*EAGVHG
Trigger: GCCATGCACACCGGCCTCCCAAACCCCACCAACCTG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAAGTTTTCTGCTCGCAATaGTGGCAACCGGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKVFCSQ*WQPGGL
Trigger: AAGGCCACCCGGTTGCCACCATTGCGAGCAGAAAAC...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGGAGACATCGTTCTGGTaGAAAGCCTTCCGCAATGCC +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVETSFW*KAFRNA
Trigger: GGCATTGCGGAAGGCTTTCCACCAGAACGATGTCTC...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTTCCTCTCGGCATCCTaGAATGCCTTCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRFLSAS*NAFCSL
Trigger: GAGGCTGCAGAAGGCATTCCAGGATGCCGAGAGGAA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCACCCGGGCAAAGCTCTaGTTGTGCAGGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFTRAKL*LCRPTS
Trigger: GCTGGTGGGCCTGCACAACCAGAGCTTTGCCCGGGT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATACAGACTCCTGGCCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGTCCTTTGGGAATCAATaGTGCTCAGGATCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: HTDSWPLWGRIERTTEGQSFGNQ*CSGSWQ
Trigger: CTGCCAAGATCCTGAGCACCATTGATTCCCAAAGGA...CTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGTCAAGGCCATCCTTTaGGAATCAATGGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQVKAIL*ESMVLR
Trigger: CCTGAGCACCATTGATTCCCAAAGGATGGCCTTGAC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGGCTGGGGGTGGTTCTTaGAGGGAAGGCTTCTCACCA +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIAAGGGS*REGFSP
Trigger: TGGTGAGAAGCCTTCCCTCCAAGAACCACCCCCAGC...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTGGTCCCCGGAGCGCTaGTCACCACCTCCGAATAGG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFWSPER*SPPPNR
Trigger: CCTATTCGGAGGTGGTGACCAGCGCTCCGGGGACCA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCTCAGCAGCACACACTaGACATCATTGTTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCLSSTH*TSLLKR
Trigger: TCTCTTCAACAATGATGTCCAGTGTGTGCTGCTGAG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTTAACTAGGGGGAACTaGCTAACTCCATACGCTTTT +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQLTRGN*LTPYAF
Trigger: AAAAGCGTATGGAGTTAGCCAGTTCCCCCTAGTTAA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATACAGCTGAAGCTAGATaGGTCATGGGTGAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHTAEAR*VMGESR
Trigger: CCTGCTTTCACCCATGACCCATCTAGCTTCAGCTGT...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGGCCACATGGCGAGATaGAAAGCAAGCAGGTTCGTG +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRGHMAR*KASRFV
Trigger: CACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGAAAGGTTGTGTGGAGTaGGTTCTTGAGGGGTGGATT +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLKGCVE*VLEGWI
Trigger: AATCCACCCCTCAAGAACCCACTCCACACAACCTTT...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGAAAGGAAAGGTTGTGTaGAGTGGGTTCTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLKGKVV*SGFLRG
Trigger: ACCCCTCAAGAACCCACTCCACACAACCTTTCCTTT...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGCTAGTCAGAGCGTGGTaGGTACTGAAAAGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLLVRAW*VLKRKG
Trigger: ACCTTTCCTTTTCAGTACCCACCACGCTCTGACTAG...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCTGCTCTCCGAGTGCTaGCTGCTGCGTGGCATGGCA +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDLLSEC*LLRGMA
Trigger: TGCCATGCCACGCAGCAGCCAGCACTCGGAGAGCAG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGGGGTGAGAAGTGGCTaGGGCAGCTCTGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFGVRSG*GSSGQS
Trigger: AGACTGGCCAGAGCTGCCCCAGCCACTTCTCACCCC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGGGATTAGCTATGTTCTaGCCTAAAGAGGGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVGLAMF*PKEGSA
Trigger: AGCCGACCCCTCTTTAGGTCAGAACATAGCTAATCC...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCAGGCACCCCAGCTTTaGTCTGCTGGGTGGATGCAG +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDQAPQL*SAGWMQ
Trigger: CTGCATCCACCCAGCAGATCAAAGCTGGGGTGCCTG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCATTTCTATGGCCCCTaGTTCTGCAGTCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHHFYGP*FCSLEK
Trigger: CTTTTCCAGACTGCAGAATCAGGGGCCATAGAAATG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAAAGGATGGCTTGCTCTTaGCCCAGTGTGGTGATATGC +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKRMACS*PSVVIC
Trigger: GCATATCACCACACTGGGTCAAGAGCAAGCCATCCT...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATAGGATGGCTTGCTCTTaGCCCAGTGTGGTGATATGC +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYRMACS*PSVVIC
Trigger: GCATATCACCACACTGGGTCAAGAGCAAGCCATCCT...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTATTAGGAACTTTGCTTaGGAGGAGCAAGTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCIRNFA*EEQVSS
Trigger: ACTAGAGACTTGCTCCTCTCAAGCAAAGTTCCTAAT...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCACCTGTTTGGAAGCTaGAGCTGGCAACCCAGAATG +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRHLFGS*SWQPRM
Trigger: CATTCTGGGTTGCCAGCTTCAGCTTCCAAACAGGTG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGCTGTTGGAGCTAAATaGGTTTCCCAACTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQAVGAK*VSQLVV
Trigger: CACCACAAGTTGGGAAACTCATTTAGCTCCAACAGC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCCGAGGACTAGATCCTaGATACTAAACCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQPRTRS*ILNPSA
Trigger: TGCAGAAGGGTTTAGTATTCAGGATCTAGTCCTCGG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCACCATTTTGCCAGTCGTaGCCACTGCAGCCGATGCAG +
Preference number: 4 (lower is better)
Translates to: QLFQRSAALVELVQEIASPFCQS*PLQPMQ
Trigger: CTGCATCGGCTGCAGTGGTCACGACTGGCAAAATGG...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCGACGTACACCAAGGTaGCTGCCTGGGAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFRRTPR*LPGRHW
Trigger: CCAATGCCTCCCAGGCAGTCACCTTGGTGTACGTCG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTTGAGGAATGTGCTCTaGTTGCCCACGACGTACACC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRLRNVL*LPTTYT
Trigger: GGTGTACGTCGTGGGCAATCAGAGCACATTCCTCAA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCTTAGCGGCGGATAGGTaGGGTAGAATCCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLILAADR*GRIPPA
Trigger: AGCTGGTGGGATTCTACCTCACCTATCCGCCGCTAA...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACTCTGGACATCTGCGTaGAGGAGGCGCTGTCGTGCA +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTLWTSA*RRRCRA
Trigger: TGCACGACAGCGCCTCCTTCACGCAGATGTCCAGAG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTTCAGAAATGGAGGGTaGGAAAGACTCACCCATTGC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHFRNGG*ERLTHC
Trigger: GCAATGGGTGAGTCTTTCTCACCCTCCATTTCTGAA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATACCAAAGAAACTCGTTaGGGACAATGGAAGATGGGC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHTKETR*GQWKMG
Trigger: GCCCATCTTCCATTGTCCTCAACGAGTTTCTTTGGT...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGAAAAGTCTGTGCATTaGCAGTTTGAACCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLEKSVH*QFEPPL
Trigger: AAGGGGAGGTTCAAACTGTCAATGCACAGACTTTTC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCTTATTTCAATTCCTTaGGGCACTTTTGACCATCTC +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQLISIP*GTFDHL
Trigger: GAGATGGTCAAAAGTGCCTCAAGGAATTGAAATAAG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGAAAGAAATGTGTTACTaGCAAGCCTGCAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLKEMCY*QACRPH
Trigger: ATGTGGCCTGCAGGCTTGTCAGTAACACATTTCTTT...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTGCCTGGAACACCTTTaGGGTTGGACTGAATGGCAG +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRCLEHL*GWTEWQ
Trigger: CTGCCATTCAGTCCAACCTCAAAGGTGTTCCAGGCA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGAATTCTAACAGCATATaGACACTCTGTTCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLNSNSI*TLCSRQ
Trigger: CTGCCGGGAACAGAGTGTTCATATGCTGTTAGAATT...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAAAGCACTTTGGGGGATTaGTCTGCTGGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKSTLGD*SAGSEM
Trigger: CATCTCTGAGCCAGCAGAGCAATCCCCCAAAGTGCT...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGCAGAGGCTAGCTTTCTaGTGGTCATTTCTATGGCCC +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVQRLAF*WSFLWP
Trigger: GGGCCATAGAAATGACCAGCAGAAAGCTAGCCTCTG...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAAGGAGCTGCTGACAAATaGAGCGGGTTAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKGAADK*SGLAES
Trigger: TGACTCTGCTAACCCGCTGCATTTGTCAGCAGCTCC...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGAGGGGACCCATCACTaGCCTCTGCTGGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTEGTHH*PLLEEW
Trigger: CCACTCTTCCAGCAGAGGGCAGTGATGGGTCCCCTC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGAAGCCTCTGGCTTGGTaGTGGAAAAGCCAAGAGATG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVKPLAW*WKSQEM
Trigger: CATCTCTTGGCTTTTCCAGCACCAAGCCAGAGGCTT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGGTATGTCCTGTTCTTaGATACATGTAGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCGMSCS*IHVGWC
Trigger: ACACCAACCTACATGTATGCAAGAACAGGACATACC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATGTGTTGCTTCAGGTCTaGAGTGACGTTGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYVLLQV*SDVADS
Trigger: GGAGTCAGCAACGTCACTGCAGACCTGAAGCAACAC...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGCAGGATCTTGGCAGCTaGGGTCCCCAACAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIAQDLGS*GPQQRL
Trigger: AAGCCTTTGTTGGGGACCGCAGCTGCCAAGATCCTG...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGACAGGCTTTGCTCTCTaGGGCAGGTTTATCATGGTG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVTGFAL*GRFIMV
Trigger: CACCATGATAAACCTGCCGCAGAGAGCAAAGCCTGT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGCCTTGCACAGGCTTTaGTCTCTGCGGCAGGTTTAT +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRALHRL*SLRQVY
Trigger: ATAAACCTGCCGCAGAGAGCAAAGCCTGTGCAAGGC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGATGACCTCCTCATCTaGCCCTTGCTGGCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFDDLLI*PLLAQV
Trigger: CACCTGGGCCAGCAAGGGGCAGATGAGGAGGTCATC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGTTCAGCGGCCACCTTaGTGGAGTTGTCAAATAGAA +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHVQRPP*WSCQIE
Trigger: TTCTATTTGACAACTCCAGCAAGGTGGCCGCTGAAC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCCATTCTGGTCTTGCTaGCGATGTCTGAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRPFWSC*RCLRWI
Trigger: GATCCACCTCAGACATCGGCAGCAAGACCAGAATGG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCAAGGAGGCGCTGTCGTaGAGCTGGGCCGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLKEALS*SWAGSG
Trigger: GCCCGAGCCGGCCCAGCTGCACGACAGCGCCTCCTT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATAAGGGCCTCCCTGCCTaGCTGTTGGGATCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDKGLPA*LLGSLV
Trigger: CACCAAGGATCCCAACAGGCAGGCAGGGAGGCCCTT...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGTCTGTAGGTAACAGCTaGCATCTTATTATGCACAAG +
Preference number: 4 (lower is better)
Translates to: DKPAGHMARWKASRFVNQSVGNS*HLIMHK
Trigger: CTTGTGCATAATAAGATGGCAGCTGTTACCTACAGA...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTCAAAAACCCAGGTGTaGATGAACCTGCTGAATGGG +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHSKTQV*MNLLNG
Trigger: CCCATTCAGCAGGTTCATCCACACCTGGGTTTTTGA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTGCAGTCTGGAAAAGTaGAGGCTCAGCCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYCSLEK*RLSLMG
Trigger: ACCCATGAGGCTGAGCCTCCACTTTTCCAGACTGCA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCAAGAGTGGGCATTTCTaGCACAGGAGATGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLIKSGHF*HRRWGG
Trigger: GCCTCCCCATCTCCTGTGCCAGAAATGCCCACTCTT...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCCCTCTGCTGGAAGAGTaGGCATTTCTGGCACAGGAG +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLIPLLEE*AFLAQE
Trigger: CTCCTGTGCCAGAAATGCCCACTCTTCCAGCAGAGG...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAAGGGGATTCGTCCTTaGTGCTGTAATGATGGGAGA +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQKGIRP*CCNDGR
Trigger: TCTCCCATCATTACAGCACCAAGGACGAATCCCCTT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATACAGACTCCTGGCCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGAATCATATACATCCATaGAGGAGGGCGATGCTCTCA +
Preference number: 4 (lower is better)
Translates to: HTDSWPLWGRIERTTEGQNHIHP*RRAMLS
Trigger: TGAGAGCATCGCCCTCCTCCATGGATGTATATGATT...CTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp CCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGCTGTTTGGAAGTCTCTaGAATGGTTGTTATTGCTTG +
Preference number: 4 (lower is better)
Translates to: PLWGRIERTTEGQSPVAVLFGSL*NGCYCL
Trigger: CAAGCAATAACAACCATTCCAGAGACTTCCAAACAG...CACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp CCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTATCCCAAGATGTTCTaGAATGGTGTGGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: PLWGRIERTTEGQSPVAVYPKMF*NGVEAF
Trigger: AAATGCTTCCACACCATTCCAGAACATCTTGGGATA...CACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGGAGGCCGGTGTGCATaGCTTGTGGTTTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTGGRCA*LVVSWG
Trigger: TCCCCAGGAAACCACAAGCCATGCACACCGGCCTCC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGACTGTCAGTGGGCGTaGCGTGGATGCTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFDCQWA*RGCSGH
Trigger: ATGCCCAGAGCATCCACGCCACGCCCACTGACAGTC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGAGACATCGTTCTGGTaGAAAGCCTTCCGCAATGCC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRETSFW*KAFRNA
Trigger: GGCATTGCGGAAGGCTTTCCACCAGAACGATGTCTC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCCGCCGGCCTTGTTGCTaGGACATCATGAATAGCTGG +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLIRRPCC*DIMNSW
Trigger: CCAGCTATTCATGATGTCCCAGCAACAAGGCCGGCG...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTGGGTCCTTCGGGCCTaGGACACGCTGCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDWVLRA*DTLHLH
Trigger: GTGAAGATGCAGCGTGTCCCAGGCCCGAAGGACCCA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGTCCTTTGGGAATCAATaGTGCTCAGGATCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQSFGNQ*CSGSWQ
Trigger: CTGCCAAGATCCTGAGCACCATTGATTCCCAAAGGA...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGCAGAGCCATTCTCACTaGGCGACCTGCTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIAQSHSH*ATCFAL
Trigger: GAGAGCAAAGCAGGTCGCCCAGTGAGAATGGCTCTG...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTGTGCCATTACATTCTaGGGTGAGCGTCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYCAITF*GERLPE
Trigger: CTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGGCCCAGGTGTTGCTTaGCATAATCAAAGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVGPGVA*HNQSLA
Trigger: TGCAAGGCTTTGATTATGCCAAGCAACACCTGGGCC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATCAGCGGCCACCTTGCTaGAGTTGTCAAATAGAACCG +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYQRPPC*SCQIEP
Trigger: CGGTTCTATTTGACAACTCCAGCAAGGTGGCCGCTG...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTGTTGGCAGCTGGGATaGCGAACACTGCTGGCACCG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFCWQLG*RTLLAP
Trigger: CGGTGCCAGCAGTGTTCGCCATCCCAGCTGCCAACA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACCGCAGTGGAGATGTTaGTCAGGGGAGCGTCAGACG +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTPQWRC*SGERQT
Trigger: CGTCTGACGCTCCCCTGACCAACATCTCCACTGCGG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGCTCAGGTTTCTTGGCTaGAGTCAGTGTCTCCCTTAC +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVLRFLG*SQCLPY
Trigger: GTAAGGGAGACACTGACTCCAGCCAAGAAACCTGAG...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGCAAAACTCCTTGCCTaGAACACCTTTGAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHAKLLA*NTFEVG
Trigger: TCCAACCTCAAAGGTGTTCCAGGCAAGGAGTTTTGC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCCTCCTGCGGAGCCATaGGGACGCTTCACACATCCA +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFPPAEP*GRFTHP
Trigger: TGGATGTGTGAAGCGTCCCCATGGCTCCGCAGGAGG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000658780.2
3UTR CAA 72 bp TCAGTTCCAGTGTGTAGTAGGTTCTTTTTGAAGGTCTaGCCCACTCATGCTCCTTCTTCTGGGTACCAGCCC +
Preference number: 4 (lower is better)
Translates to: SVPVCSRFFLKV*PTHAPSSGYQP
Trigger: GGGCTGGTACCCAGAAGAAGGAGCATGAGTGGGCAAGACCTTCAAAAAGAACCTACTACACACTGGAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTAATCCATTTACAGTGTaGAGACTCAAAACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRNPFTV*RLKTSF
Trigger: GAAAGAGGTTTTGAGTCTTCACACTGTAAATGGATT...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATATGTCGAGTTGTGGGTaGGTAATATGCAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHMSSCG*VICNFS
Trigger: GCTGAAGTTGCATATTACTCACCCACAACTCGACAT...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGATTCAGCAGCAGAGTaGTATCCCAAGATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVDSAAE*YPKMFW
Trigger: CCAGAACATCTTGGGATATCACTCTGCTGCTGAATC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGTGGCTGTACCTTAGATaGTACTGTGTCCGCTGCATT +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVWLYLR*YCVRCI
Trigger: AATGCAGCGGACACAGTATCATCTAAGGTACAGCCA...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGACATGTAGGTTGGTGTaGATGGGAAGGCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVTCRLV*MGRLYG
Trigger: TCCATACAGCCTTCCCATTCACACCAACCTACATGT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCCATTTTGCCAGTCGTaGCCACTGCAGCCGATGCAG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFPFCQS*PLQPMQ
Trigger: CTGCATCGGCTGCAGTGGTCACGACTGGCAAAATGG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGAGCTTACTGGACATCTaGCACTCCAGGTTGGATGCC +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIASLLDI*HSRLDA
Trigger: GGCATCCAACCTGGAGTGTCAGATGTCCAGTAAGCT...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGTTGCTGGGACATCATaGATAGCTGGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFVAGTS*IAGPGA
Trigger: AGCGCCTGGCCCAGCTATTCATGATGTCCCAGCAAC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCAATAGAAAGAACGACTaGGGGTCAGAGCCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLINRKND*GSEPSG
Trigger: GCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATT...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp AGGAATCTCCAAGATGAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGCAGGGGCGGAGGAAGTaGGACAGGACAATTCAGACA +
Preference number: 4 (lower is better)
Translates to: RNLQDEQLFQRSAALVELQGRRK*DRTIQT
Trigger: TGTCTGAATTGTCCTGTCTCACTTCCTCCGCCCCTG...CAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTCATCTTGGAGATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGGGCAGGTGCTGGGCTaGGCCGTAGGCCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQGQVLG*AVGLLV
Trigger: CACCAAGAGGCCTACGGCTCAGCCCAGCACCTGCCC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTGGCCTTTGTTTAATTaGCGAGGGAAACAAAGAATC +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCWPLFN*RGKQRI
Trigger: GATTCTTTGTTTCCCTCGTCAATTAAACAAAGGCCA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATGACCACAGTGATTTGTaGCTCCACCCTCTTAGCACT +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYDHSDL*LHPLST
Trigger: AGTGCTAAGAGGGTGGAGTCACAAATCACTGTGGTC...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTGGGATCCTTGGTGCTaGGACAGGAATGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFWDPWC*DRNAPP
Trigger: TGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATAAGAAGACTTCCAAGTaGTGGGGGAGGGGGAGACGG +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDKKTSK*WGRGRR
Trigger: CCGTCTCCCCCTCCCCCAGCACTTGGAAGTCTTCTT...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGGAGCAAGTCTCTAGTTaGAGGAGGGGACCCATCACT +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIAEQVSS*RRGPIT
Trigger: AGTGATGGGTCCCCTCCTGCAACTAGAGACTTGCTC...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAAAAGCCTCTGGCTTGGTaGTGGAAAAGCCAAGAGATG +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKKPLAW*WKSQEM
Trigger: CATCTCTTGGCTTTTCCAGCACCAAGCCAGAGGCTT...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGTCTGCAGTCACTGAATaGCCAGCAGTATCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLSAVTE*PAVSLK
Trigger: TTTCAAAGATACTGCTGGGCATTCAGTGACTGCAGA...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGTCATGTCTGACTGTTaGACAGGCTGCTCAATGCTT +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVVMSDC*TGCSML
Trigger: AAGCATTGAGCAGCCTGTGCAACAGTCAGACATGAC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCTGTGACGGCAGCTGCTaGTGTTGGCTGTACCTTAGA +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLICDGSC*CWLYLR
Trigger: TCTAAGGTACAGCCAACAGCAGCAGCTGCCGTCACA...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGTGTCCATGTTTCCTTaGATGGCTGTATGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVVSMFP*MAVCVL
Trigger: GAGCACACATACAGCCATGCAAGGAAACATGGACAC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCGGAATGTGCTCTGATTaGCCACGACGTACACCAAGG +
Preference number: 4 (lower is better)
Translates to: AVISEICCLSGTGARNCVGMCSD*PRRTPR
Trigger: CCTTGGTGTACGTCGTGGGCAATCAGAGCACATTCC...GACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp AGGAATCTCCAAGATGAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGAATGGGCGCCAGCACTaGAGCGATGATCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: RNLQDEQLFQRSAALVELNGRQH*SDDPQV
Trigger: AACCTGTGGATCATCGCTGCAGTGCTGGCGCCCATT...CAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTCATCTTGGAGATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp CATACAGACTCCTGGCCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGTCCTTTGTCACTTTCTaGTGTGCCATTACATTCTGG +
Preference number: 4 (lower is better)
Translates to: HTDSWPLWGRIERTTEGQSFVTF*CAITFW
Trigger: CCAGAATGTAATGGCACAGCAGAAAGTGACAAAGGA...CTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGTTTATGGCAATGAGCTaGACAGACCCAGAAGATGTG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQFMAMS*TDPEDV
Trigger: CACATCTTCTGGGTCTGTGCAGCTCATTGCCATAAA...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTGCGTGGCCCGCGGATaGCAGGCTGAAGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLCVARG*QAEGLL
Trigger: GAGGAGGCCTTCAGCCTGGCATCCGCGGGCCACGCA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGAGAATACAGTCTGGTaGTTAATCCACACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQENTVW*LIHTPA
Trigger: TGCAGGAGTGTGGATTAAGCACCAGACTGTATTCTC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGAGTCCCCAATCTCCCTaGTACACAAAGTCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVSPQSP*YTKSVA
Trigger: AGCTACTGACTTTGTGTAGCAGGGAGATTGGGGACT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAGTCAAGGGCCTCCCTaGCTGCCTGTTGGGATCCTT +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTSQGPP*LPVGIL
Trigger: AAGGATCCCAACAGGCAGGCAGGGAGGCCCTTGACT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAGTCAAGGGCCTCCCTaGCTGCCTGTTGGGATCCTT +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFSQGPP*LPVGIL
Trigger: AAGGATCCCAACAGGCAGGCAGGGAGGCCCTTGACT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATACAATGGACCTTTACTaGACCTCCCCTGATGCAGAG +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYTMDLY*TSPDAE
Trigger: CTCTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGT...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCCTCTCTCCATAATTTaGAAAAGTCTGACCAAAGTC +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCPLSII*KSLTKV
Trigger: GACTTTGGTCAGACTTTTGCAAATTATGGAGAGAGG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCGGGGGATTGCTCTGCTaGCTCAGAGATGATGGAATG +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLIGGLLC*LRDDGM
Trigger: CATTCCATCATCTCTGAGCCAGCAGAGCAATCCCCC...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTCGGCTGGAGCTGTTTaGGGAACTAACAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYSAGAV*GTNSTL
Trigger: CAAAGTGCTGTTAGTTCCCCAAACAGCTCCAGCCGA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAGGGACAGTTCTGCCATaGGGCTCAAAAACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: QLFQRSAALVELVQEIASGTVLP*GSKTQV
Trigger: CACCTGGGTTTTTGAGCCCCATGGCAGAACTGTCCC...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCAGAGTCATTTGCAGTaGCAGAGGCTAGCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRQSHLQ*QRLAFC
Trigger: GCAGAAAGCTAGCCTCTGCCACTGCAAATGACTCTG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCCGCCCCAGAAAGGATaGCTTGCTCTTGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFPPQKG*LALDPV
Trigger: CACTGGGTCAAGAGCAAGCCATCCTTTCTGGGGCGG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGATGGGAAAACAGTCTaGGTGGCTTGTATGGAGAGT +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVDGKTV*VACMES
Trigger: ACTCTCCATACAAGCCACCCAGACTGTTTTCCCATC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACATAAGCCTCTGGCTTaGTGCTGGAAAAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKHKPLA*CWKSQE
Trigger: CTCTTGGCTTTTCCAGCACCAAGCCAGAGGCTTATG...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCCTCTGGAGGAGGTCCTaGGAAAGACACTGGTCGATA +
Preference number: 4 (lower is better)
Translates to: AVISEICCLSGTGARNCVLWRRS*ERHWSI
Trigger: TATCGACCAGTGTCTTTCCCAGGACCTCCTCCAGAG...GACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCCCTGGTGTCCTCTTTaGGCCAGATGCGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFPWCPL*ARCGLV
Trigger: AACAAGGCCGCATCTGGCCCAAAGAGGACACCAGGG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATTGGGCATCTCCAGGTTaGTGGGGTTTGGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHWASPG*WGLGGR
Trigger: CCGGCCTCCCAAACCCCACCAACCTGGAGATGCCCA...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATGCTGAGACATCGTTCTaGTGGAAAGCCTTCCGCAAT +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYAETSF*WKAFRN
Trigger: ATTGCGGAAGGCTTTCCACCAGAACGATGTCTCAGC...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAGGCTGGGGATTCCATaGGGAGGCAAGTACTGCCAC +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFRLGIP*GGKYCH
Trigger: GTGGCAGTACTTGCCTCCCCATGGAATCCCCAGCCT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGTGTATGTTGTCCGCTTaGCTCACAAACTGCAGCACT +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVCMLSA*LTNCST
Trigger: AGTGCTGCAGTTTGTGAGCCAAGCGGACAACATACA...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGTGTATGTTGTCCGCTTaGCTCACAAACTGCAGCACT +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVCMLSA*LTNCST
Trigger: AGTGCTGCAGTTTGTGAGCCAAGCGGACAACATACA...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAAGTCAAGGCCATCCTTTaGGAATCAATGGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKVKAIL*ESMVLR
Trigger: CCTGAGCACCATTGATTCCCAAAGGATGGCCTTGAC...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGTCAAGGCCATCCTTTaGGAATCAATGGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRVKAIL*ESMVLR
Trigger: CCTGAGCACCATTGATTCCCAAAGGATGGCCTTGAC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCAGAGCCATTCTCACTaGGCGACCTGCTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDQSHSH*ATCSSW
Trigger: CCAGGAAGAGCAGGTCGCCCAGTGAGAATGGCTCTG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGACCTCGTCGATGGATaGCTGGGAGCTCAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFDLVDG*LGAQCG
Trigger: TCCACACTGAGCTCCCAGCCATCCATCGACGAGGTC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGGGCCTGCTCCAGGCTaGGGTGCAGGTTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLGPAPG*GAGWLA
Trigger: AGCCAGCCAACCTGCACCCCAGCCTGGAGCAGGCCC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATCACAAGGGCCGCAGTaGAGATGTTGGTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTSQGPQ*RCWSGE
Trigger: CTCCCCTGACCAACATCTCCACTGCGGCCCTTGTGA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTCTCAAGCCACACAATaGACCTTTACTGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRSQATQ*TFTAPP
Trigger: GGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAATGAGAAAGCTGGTTaGCCAGGAGAAGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQNEKAG*PGEARE
Trigger: TTCTCTTGCTTCTCCTGGCCAACCAGCTTTCTCATT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAGACATTGTGCTAACTaGGCCTTGTTCAGAAATCGC +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQRHCAN*ALFRNR
Trigger: GCGATTTCTGAACAAGGCCCAGTTAGCACAATGTCT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGCTCTCACTGAAGTATaGTTTGACCAATGGAGACAG +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQALTEV*FDQWRQ
Trigger: CTGTCTCCATTGGTCAAACCATACTTCAGTGAGAGC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTTCTGTGGTGTGTCTTaGACGCAGGGGTTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDFCGVS*TQGFGL
Trigger: CAGCCCGAACCCCTGCGTCCAAGACACACCACAGAA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCCTCCTCGCTCCTCGCTaGGCTTCGGGTTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLLLAPR*ASGSSP
Trigger: GGGGCTGGAACCCGAAGCCCAGCGAGGAGCGAGGAG...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTGTAATGATGGGAGATaGGACACTACCGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYCNDGR*DTTGAE
Trigger: TTCAGCACCGGTAGTGTCTCATCTCCCATCATTACA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAAGCTGTTGGAGCTAAATaGGTTTCCCAACTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKAVGAK*VSQLVV
Trigger: CACCACAAGTTGGGAAACTCATTTAGCTCCAACAGC...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCGTATCTTTGAAATCCTaGGATTTTATGGCATCGGCA +
Preference number: 4 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPVSLKS*DFMASA
Trigger: TGCCGATGCCATAAAATCTCAGGATTTCAAAGATAC...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCCCCTTCTGCAGTCACTaGATGCCCAGCAGTATCTTT +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLIPFCSH*MPSSIF
Trigger: AAAGATACTGCTGGGCATTCAGTGACTGCAGAAGGG...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTCTGTTCCATTGTCTaGGCAAACTTGCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKLCSIV*ANLQDC
Trigger: ACAGTCCTGCAAGTTTGCTCAGACAATGGAACAGAG...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTTAGCGGCGGATAGGTaGGGTAGAATCCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDLAADR*GRIPPA
Trigger: AGCTGGTGGGATTCTACCTCACCTATCCGCCGCTAA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTCATGGTGTCAGGCTTaGAGTCGTTCTTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYSWCQA*SRSCSS
Trigger: GGAAGAACAAGAACGACTTCAAGCCTGACACCATGA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCAGACAAGGGGTAAGGTaGGAACCCAAGGGGTACATA +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLIRQGVR*EPKGYI
Trigger: TATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCT...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACACAGACTGAACCCATaGAACTTATCAGGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKHRLNP*NLSGES
Trigger: TGACTCCCCTGATAAGTTTCATGGGTTCAGTCTGTG...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAGAACCACTGTCTCCTaGGTCACAGGGATGACCTCC +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFRTTVS*VTGMTS
Trigger: GGAGGTCATCCCTGTGACTCAGGAGACAGTGGTTCT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATATAGTGCTCGATGTCTaGCTTCTGCTTCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYIVLDV*LLLQGF
Trigger: AAAGCCCTGAAGCAGAAGTCAGACATCGAGCACTAT...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTGTTGGTTTCCTCTATaGTTTCAGGCTCAGTATCGT +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHCWFPL*FQAQYR
Trigger: ACGATACTGAGCCTGAAATCATAGAGGAAACCAACA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGCCACAATCAGTTGGATaGGCCAAGAATCTAGTCGTT +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVPQSVG*AKNLVV
Trigger: AACGACTAGATTCTTGGCTCATCCAACTGATTGTGG...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGTGTGCATTGACAGTTTaGACCTCCCCTTCTAATCAG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVCALTV*TSPSNQ
Trigger: CTGATTAGAAGGGGAGGTTCAAACTGTCAATGCACA...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGATGACACATCATCTCTaGACATTCCAGAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVMTHHL*TFQKGQ
Trigger: CTGCCCTTTCTGGAATGTTCAGAGATGATGTGTCAT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGTGTTTGAAGGTTCCATaGCACATCATCTCTGAACAT +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLCLKVP*HIISEH
Trigger: ATGTTCAGAGATGATGTGTCATGGAACCTTCAAACA...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCAGTGTTTTGCAAACTaGTTTAGGTTTTGGACTACA +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCQCFAN*FRFWTT
Trigger: TGTAGTCCAAAACCTAAATCAGTTTGCAAAACACTG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAAGCAAGCAGGTTCGTaGACCAGGAGGTTGGGACTG +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTKQAGS*TRRLGL
Trigger: CAGTCCCAACCTCCTGGTTCACGAACCTGCTTGCTT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGAGGTCTCCGTTTCCTTaGTGGTACTCTTTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVRSPFP*WYSFWK
Trigger: TTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGTAGTAGGTTCTTTTTaGAGGTCTTGCCCACTCATG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVVVGSF*RSCPLM
Trigger: CATGAGTGGGCAAGACCTTCAAAAAGAACCTACTAC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCCATTCATATGCCTCTaGTTCTGTTTGATACAAATC +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCPFICL*FCLIQI
Trigger: GATTTGTATCAAACAGAATCAGAGGCATATGAATGG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGAATTCTAACAGCATATaGACACTCTGTTCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVNSNSI*TLCSRQ
Trigger: CTGCCGGGAACAGAGTGTTCATATGCTGTTAGAATT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGAAGAGAAGTCCGCGTaGGCCCTAGTTCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTEEKSA*ALVLWC
Trigger: ACACCACAGAACTAGGGCTCACGCGGACTTCTCTTC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAGGGGAGCATGCTGGTaGGAGGCAAACCTGACACAT +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFRGACW*EANLTH
Trigger: ATGTGTCAGGTTTGCCTCTCACCAGCATGCTCCCCT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR GCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTGGGCATTTTGGGATaGAGTGTGGTCCATTTCATC +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKLGILG*SVVHFI
Trigger: GATGAAATGGACCACACTGCATCCCAAAATGCCCAG...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCACCCCAGCTTTGATCTaGTGGGTGGATGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFTPALI*WVDAGP
Trigger: AGGTCCTGCATCCACCCAGCAGATCAAAGCTGGGGT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGGAATCTCCAAGATGAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGATGGTCCACAGCAGCTaGATAAGCCTCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: RNLQDEQLFQRSAALVELMVHSS*ISLWLG
Trigger: ACCAAGCCAGAGGCTTATGCAGCTGCTGTGGACCAT...CAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTCATCTTGGAGATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGAAAACATCTGTGGTTaGTGGCTTTTTCATGTCTCC +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQENICG*WLFHVS
Trigger: GGAGACATGAAAAAGCCAGCAACCACAGATGTTTTC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTCTGCAGTCACTGAATaGCCAGCAGTATCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHSAVTE*PAVSLK
Trigger: TTTCAAAGATACTGCTGGGCATTCAGTGACTGCAGA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGGCACAGGCTGCTCAATaGTTGTACCGAGGACTAGAT +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIAAQAAQ*LYRGLD
Trigger: ATCTAGTCCTCGGTACAAGCATTGAGCAGCCTGTGC...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAAGTCATGTCTGACTGTTaGACAGGCTGCTCAATGCTT +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKVMSDC*TGCSML
Trigger: AAGCATTGAGCAGCCTGTGCAACAGTCAGACATGAC...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGTCTGAAAGCATTTCCTaGAAGCTACCTGTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLSESIS*KLPVEV
Trigger: AACTTCTACAGGTAGCTTGCAGGAAATGCTTTCAGA...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCTTAGCAACCAGGGCTaGAGACAGTGCAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFLSNQG*RQCRWT
Trigger: AGTCCACCTGCACTGTCTGCAGCCCTGGTTGCTAAG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACTTAGCAACCAGGGCTaGAGACAGTGCAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTLSNQG*RQCRWT
Trigger: AGTCCACCTGCACTGTCTGCAGCCCTGGTTGCTAAG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCAGCATCTGTGTTTTCTaGTCGCAATGGTGGCAACCG +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLISICVF*SQWWQP
Trigger: CGGTTGCCACCATTGCGAGCAGAAAACACAGATGCT...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATGCTTGGCTCACAAACTaGAGCACTGTTTTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYAWLTN*STVFSW
Trigger: CCAGCTAAAAACAGTGCTGCAGTTTGTGAGCCAAGC...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACTCGGCATCCTGGAATaGCTTCTGCAGCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTLGILE*LLQPLF
Trigger: GAACAGAGGCTGCAGAAGGCATTCCAGGATGCCGAG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATGGGAGGCATTGGACGTaGTCACAATCTGAATTGTCA +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYGRHWT*SQSELS
Trigger: TGACAATTCAGATTGTGAGCACGTCCAATGCCTCCC...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGTACACCAAGGTGACTaGCTGGGAGGCATTGGACGT +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDVHQGD*LGGIGR
Trigger: ACGTCCAATGCCTCCCAGGCAGTCACCTTGGTGTAC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAAACCGCCGGCCTTGTTaGTGGGACATCATGAATAGC +
Preference number: 4 (lower is better)
Translates to: QLFQRSAALVELVQEIASNRRPC*WDIMNS
Trigger: GCTATTCATGATGTCCCAGCAACAAGGCCGGCGGTT...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAATGGGCGCCAGCACTaGAGCGATGATCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFNGRQH*SDDPQV
Trigger: AACCTGTGGATCATCGCTGCAGTGCTGGCGCCCATT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGTTCAGCGGCCACCTTaGTGGAGTTGTCAAATAGAA +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRVQRPP*WSCQIE
Trigger: TTCTATTTGACAACTCCAGCAAGGTGGCCGCTGAAC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGAAAGACTCACCCATTaGTATGTCTCAAGTCCTAAC +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQERLTH*YVSSPN
Trigger: GTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGTAGGCAGCGGCTGGTaGCTCAGTGCCGTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLVGSGW*LSAVRR
Trigger: TCGCCTCACGGCACTGAGGCACCAGCCGCTGCCTAC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATACTTCGTGGTACTTCTaGTTCCTCCTCCAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYTSWYF*FLLQGQ
Trigger: TTGACCTTGGAGGAGGAAGCAGAAGTACCACGAAGT...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGACTTCGTGGTACTTCTaGTTCCTCCTCCAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRTSWYF*FLLQGQ
Trigger: TTGACCTTGGAGGAGGAAGCAGAAGTACCACGAAGT...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTGCTGGTCATTTCTATaGCCCCTGATTCTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRCWSFL*PLILQS
Trigger: AGACTGCAGAATCAGGGGCCATAGAAATGACCAGCA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCCTCTGCTGGAAGAGTaGGCATTTCTGGCACAGGAG +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDPLLEE*AFLAQE
Trigger: CTCCTGTGCCAGAAATGCCCACTCTTCCAGCAGAGG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCCATTCTTCCCTAAAATaGCTGTCACACTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPHSSLK*LSHCPF
Trigger: AAAAGGACAGTGTGACAGCCATTTTAGGGAAGAATG...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATGATGGGAAAACAGTCTaGGTGGCTTGTATGGAGAGT +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYDGKTV*VACMES
Trigger: ACTCTCCATACAAGCCACCCAGACTGTTTTCCCATC...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGCTGAAGTTAAACCATTaGGAGGAGCTGTTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVLKLNH*EELLEL
Trigger: TAGCTCCAACAGCTCCTCCCAATGGTTTAACTTCAG...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGTATGGCTTCCAACCATaGTCATGTCTGACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVYGFQP*SCLTVA
Trigger: TGCAACAGTCAGACATGACCATGGTTGGAAGCCATA...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGTATGGCTTCCAACCATaGTCATGTCTGACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVYGFQP*SCLTVA
Trigger: TGCAACAGTCAGACATGACCATGGTTGGAAGCCATA...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAAGGTTGTTATTGCTTGTaGGCCAGAGGTCTATATGGC +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKGCYCL*ARGLYG
Trigger: GCCATATAGACCTCTGGCCCACAAGCAATAACAACC...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATGGTTGTTATTGCTTGTaGGCCAGAGGTCTATATGGC +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYGCYCL*ARGLYG
Trigger: GCCATATAGACCTCTGGCCCACAAGCAATAACAACC...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAGATGTGCTGGCTGGTTaGGCAACTGTAGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: QLFQRSAALVELVQEIASDVLAG*ATVAED
Trigger: ATCCTCAGCTACAGTTGCCCAACCAGCCAGCACATC...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCAAGATGTTCTGGAATaGTGTGGAAGCATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQQDVLE*CGSISL
Trigger: GAGAGAAATGCTTCCACACCATTCCAGAACATCTTG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTGTATGGACTGCCCCTaGTGTCCTCTTTGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDCMDCP*CPLWAR
Trigger: TCTGGCCCAAAGAGGACACCAGGGGCAGTCCATACA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAATGGGAAGGCTGTATaGACTGCCCCTGGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTNGKAV*TAPGVL
Trigger: GAGGACACCAGGGGCAGTCCATACAGCCTTCCCATT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGGTAGGTTGGTGTGAATaGGAAGGCTGTATGGACTGC +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIAVGWCE*EGCMDC
Trigger: GCAGTCCATACAGCCTTCCCATTCACACCAACCTAC...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp AGGAATCTCCAAGATGAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGGTGTGCATGGCTTGTaGTTTCCTGGGGAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: RNLQDEQLFQRSAALVELGVHGL*FPGEVS
Trigger: ACTTACCTCCCCAGGAAACCACAAGCCATGCACACC...CAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTCATCTTGGAGATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGTTTTCTGCTCGCAATaGTGGCAACCGGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDVFCSQ*WQPGGL
Trigger: AAGGCCACCCGGTTGCCACCATTGCGAGCAGAAAAC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGATCTGCACTCTCCTTTaGGTGAGAAAGAGAACTGTC +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVICTLL*VRKRTV
Trigger: GACAGTTCTCTTTCTCACCCAAAGGAGAGTGCAGAT...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGATCTGCACTCTCCTTTaGGTGAGAAAGAGAACTGTC +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVICTLL*VRKRTV
Trigger: GACAGTTCTCTTTCTCACCCAAAGGAGAGTGCAGAT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTTGTCAAGTTGCTTTTaGTATTCAGGACTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCLSSCF*YSGLSS
Trigger: AGAGGAAAGTCCTGAATACCAAAAGCAACTTGACAA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGACATCATGAATAGCTaGGCCAGGCGCTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDDIMNS*ARRCSM
Trigger: CATGGAGCAGCGCCTGGCCCAGCTATTCATGATGTC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCTGGAGGGAGAGCTCTaGGGGTACCGTGATCGGGGG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQLEGEL*GYRDRG
Trigger: CCCCCGATCACGGTACCCCCAGAGCTCTCCCTCCAG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGAATGAGAATACAGTCTaGTGCTTAATCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLNENTV*CLIHTP
Trigger: AGGAGTGTGGATTAAGCACCAGACTGTATTCTCATT...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGATCATGGTCACAAAGTaGCCACCCTACCATTTCAGC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRIMVTK*PPYHFS
Trigger: GCTGAAATGGTAGGGTGGCCACTTTGTGACCATGAT...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCAACTTGCAACATCATaGTCACAAAGTGGCCACCCT +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRQLATS*SQSGHP
Trigger: AGGGTGGCCACTTTGTGACCATGATGTTGCAAGTTG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTGGGTAGGCAGCGGCTaGTGCCTCAGTGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLWVGSG*CLSAVR
Trigger: CCTCACGGCACTGAGGCACCAGCCGCTGCCTACCCA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCTCCTCAGGGCTCTCTaGGAACCTTATTTCAATTCC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRLLRAL*EPYFNS
Trigger: GGAATTGAAATAAGGTTCCCAGAGAGCCCTGAGGAG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATCTCCTCAGGGCTCTCTaGGAACCTTATTTCAATTCC +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYLLRAL*EPYFNS
Trigger: GGAATTGAAATAAGGTTCCCAGAGAGCCCTGAGGAG...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCACCAGAAACACCTAGATaGGGGATGCCTATGAGATCC +
Preference number: 4 (lower is better)
Translates to: QLFQRSAALVELVQEIASPETPR*GMPMRS
Trigger: GGATCTCATAGGCATCCCTCATCTAGGTGTTTCTGG...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAGGATGGCTTGCTCTTaGCCCAGTGTGGTGATATGC +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTRMACS*PSVVIC
Trigger: GCATATCACCACACTGGGTCAAGAGCAAGCCATCCT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGATTAGGAACTTTGCTTaGGAGGAGCAAGTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVIRNFA*EEQVSS
Trigger: ACTAGAGACTTGCTCCTCTCAAGCAAAGTTCCTAAT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATAGACACTACCGGTGCTaGAATCAGAGACAAATCCAT +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYRHYRC*NQRQIH
Trigger: ATGGATTTGTCTCTGATTTCAGCACCGGTAGTGTCT...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATCATTTCTTGGGGTGCTaGGAAGCCCGCAGCACTCTG +
Preference number: 4 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHHFLGC*EARSTL
Trigger: CAGAGTGCTGCGGGCTTCTCAGCACCCCAAGAAATG...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTCCTCAGAAACAATGTaGCGGCAGCTGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFSSETM*RQLLLL
Trigger: CAACAGCAGCAGCTGCCGTCACATTGTTTCTGAGGA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAGCTTACTGGACATCTaGCACTCCAGGTTGGATGCC +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTSLLDI*HSRLDA
Trigger: GGCATCCAACCTGGAGTGTCAGATGTCCAGTAAGCT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATCCAGAATGTCCACGTaGGCTGAGACATCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTSRMST*AETSFW
Trigger: CCAGAACGATGTCTCAGCTCACGTGGACATTCTGGA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCCAACTGTGACATTATaGGAATATTCCAGAATGTCC +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQPTVTL*EYSRMS
Trigger: GGACATTCTGGAATATTCTCATAATGTCACAGTTGG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGGTCTCTGGTTGTTTCTaGTATGTCAAGGTTGGGATA +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVVSGCF*YVKVGI
Trigger: TATCCCAACCTTGACATATCAGAAACAACCAGAGAC...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATGTTGCTGGGACATCATaGATAGCTGGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHVAGTS*IAGPGA
Trigger: AGCGCCTGGCCCAGCTATTCATGATGTCCCAGCAAC...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTACGGGTGGAGGCGGTaGGCCCATGACCATCTCAGG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLYGWRR*AHDHLR
Trigger: CCTGAGATGGTCATGGGCTCACCGCCTCCACCCGTA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGTTCATTCAAGTGCATTaGATGCCTATGTGGATAGAC +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQFIQVH*MPMWID
Trigger: GTCTATCCACATAGGCATTCAATGCACTTGAATGAA...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCTTATTTCAATTCCTTaGGGCACTTTTGACCATCTC +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQLISIP*GTFDHL
Trigger: GAGATGGTCAAAAGTGCCTCAAGGAATTGAAATAAG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATAGGTCTCCGTTTCCTTaGTGGTACTCTTTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYRSPFP*WYSFWK
Trigger: TTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCT...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCTGGGACCAGGGAATTaGTTCTTACATAATCTACCC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRLGPGN*FLHNLP
Trigger: GGGTAGATTATGTAAGAATCAATTCCCTGGTCCCAG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGTATTTATTGTCTGCTaGGCAAGACATTGTGCTAAC +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHVFIVC*ARHCAN
Trigger: GTTAGCACAATGTCTTGCTCAGCAGACAATAAATAC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATAGCACTTTGGGGGATTaGTCTGCTGGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDSTLGD*SAGSEM
Trigger: CATCTCTGAGCCAGCAGAGCAATCCCCCAAAGTGCT...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGGAATCTCCAAGATGAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGGGGACAGCTCGGAATaGCATTTTGTTGAGGATCCA +
Preference number: 4 (lower is better)
Translates to: RNLQDEQLFQRSAALVELGDSSE*HFVEDP
Trigger: TGGATCCTCAACAAAATGGCATTCCGAGCTGTCCCC...CAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTCATCTTGGAGATTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATAAGAAGACTTCCAAGTaGTGGGGGAGGGGGAGACGG +
Preference number: 4 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHKKTSK*WGRGRR
Trigger: CCGTCTCCCCCTCCCCCAGCACTTGGAAGTCTTCTT...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAAAGACACCCCATTGTaGACTCTTCCAGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFKDTPL*TLPGTP
Trigger: TGGGGTGCCTGGAAGAGTGCACAATGGGGTGTCTTT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGAGCAAGTCTCTAGTTaGAGGAGGGGACCCATCACT +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFEQVSS*RRGPIT
Trigger: AGTGATGGGTCCCCTCCTGCAACTAGAGACTTGCTC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTCATGGAGGAGGGCGATaGTCTCACCTGTTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LFQRSAALVELVQEIASIHGGGR*SHLFGS
Trigger: GCTTCCAAACAGGTGAGAGCATCGCCCTCCTCCATG...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGACTGTTGCACAGGCTaGTCAATGCTTGTACCGAGG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFDCCTG*SMLVPR
Trigger: CCTCGGTACAAGCATTGAGCAGCCTGTGCAACAGTC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTGGAATGGTTGTTATTaGTTGTGGGCCAGAGGTCTA +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRWNGCY*LWARGL
Trigger: TAGACCTCTGGCCCACAAGCAATAACAACCATTCCA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTGTGACGGCAGCTGCTaGTGTTGGCTGTACCTTAGA +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFCDGSC*CWLYLR
Trigger: TCTAAGGTACAGCCAACAGCAGCAGCTGCCGTCACA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATGTGACGGCAGCTGCTaGTGTTGGCTGTACCTTAGA +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTCDGSC*CWLYLR
Trigger: TCTAAGGTACAGCCAACAGCAGCAGCTGCCGTCACA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCAATGTGACGGCAGCTaGTGCTGTTGGCTGTACCTT +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFQCDGS*CCWLYL
Trigger: AAGGTACAGCCAACAGCAGCAGCTGCCGTCACATTG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACAATGTGACGGCAGCTaGTGCTGTTGGCTGTACCTT +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTQCDGS*CCWLYL
Trigger: AAGGTACAGCCAACAGCAGCAGCTGCCGTCACATTG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTCTTAGCAACCAGGGCTaGAGACAGTGCAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: LFQRSAALVELVQEIASILSNQG*RQCRWT
Trigger: AGTCCACCTGCACTGTCTGCAGCCCTGGTTGCTAAG...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp AGGAATCTCCAAGATGAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGCCTCTTTGGGCCAGATaGGGCCTTGTTTGTGACATT +
Preference number: 4 (lower is better)
Translates to: RNLQDEQLFQRSAALVELPLWAR*GLVCDI
Trigger: AATGTCACAAACAAGGCCGCATCTGGCCCAAAGAGG...CAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTCATCTTGGAGATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAAGTGTGGGGTGTGTTaGTTCAGGTCTGCAGTGACG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFKCGVC*FRSAVT
Trigger: CGTCACTGCAGACCTGAAGCAACACACCCCACACTT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAACCTGCTTTGCTCTCTaGGGCAGGTTTATCATGGTG +
Preference number: 4 (lower is better)
Translates to: QLFQRSAALVELVQEIASTCFAL*GRFIMV
Trigger: CACCATGATAAACCTGCCGCAGAGAGCAAAGCAGGT...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGAGTTCTTCATCTGTTaGCTGTTTTTAGACTCGGTG +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVEFFIC*LFLDSV
Trigger: CACCGAGTCTAAAAACAGGCAACAGATGAAGAACTC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAGGGTGTTTGTTCATTaGTGCCTCCTCAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTRVFVH*CLLRAL
Trigger: GAGAGCCCTGAGGAGGCAGCAATGAACAAACACCCT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGCAGAGCATGGACTCTaGTGCCTCACAGTGACACAA +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFAEHGL*CLTVTQ
Trigger: TTGTGTCACTGTGAGGCAGCAGAGTCCATGCTCTGC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGGTCTTGCCCACTCATaGTCCTTCTTCTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFGLAHS*SFFWVP
Trigger: TGGTACCCAGAAGAAGGAGCATGAGTGGGCAAGACC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAGAACTAACAGCACTTTaGGGGATTGCTCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QLFQRSAALVELVQEIASELTAL*GIALLA
Trigger: AGCCAGCAGAGCAATCCCCCAAAGTGCTGTTAGTTC...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATATGGGGACCCTCTGTTaGGGACAGCTCGGAATGCCA +
Preference number: 4 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHMGTLC*GQLGMP
Trigger: TGGCATTCCGAGCTGTCCCCAACAGAGGGTCCCCAT...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACCAGCTTTGATCTGCTaGGTGGATGCAGGACCTGAA +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTPALIC*VDAGPE
Trigger: TTCAGGTCCTGCATCCACCCAGCAGATCAAAGCTGG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGTGTATTCTTAAAAGTTaGCAAAGACACCCCATTGTG +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLCILKS*QRHPIV
Trigger: CACAATGGGGTGTCTTTGCCAACTTTTAAGAATACA...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGGAGGCTCAGCCTCATaGGTCGCTGTTTCTGTATTC +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDGGSAS*VAVSVF
Trigger: GAATACAGAAACAGCGACCCATGAGGCTGAGCCTCC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCACAGAGTCATTTGCAGTaGCAGAGGCTAGCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: QLFQRSAALVELVQEIASQSHLQ*QRLAFC
Trigger: GCAGAAAGCTAGCCTCTGCCACTGCAAATGACTCTG...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAATCACTGCCCTCTGCTaGAAGAGTGGGCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTITALC*KSGHFW
Trigger: CCAGAAATGCCCACTCTTCCAGCAGAGGGCAGTGAT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTTCCTTGGAAAGGCCTaGAGAGGAATCGTCACATTT +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYFLGKA*RGIVTF
Trigger: AAATGTGACGATTCCTCTCCAGGCCTTTCCAAGGAA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAAGGGGATTCGTCCTTaGTGCTGTAATGATGGGAGA +
Preference number: 4 (lower is better)
Translates to: AVISEICCLSGTGARNCVKGIRP*CCNDGR
Trigger: TCTCCCATCATTACAGCACCAAGGACGAATCCCCTT...GACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCGATGGGAAAACAGTCTaGGTGGCTTGTATGGAGAGT +
Preference number: 4 (lower is better)
Translates to: AVISEICCLSGTGARNCVDGKTV*VACMES
Trigger: ACTCTCCATACAAGCCACCCAGACTGTTTTCCCATC...GACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCCTCTGGCTTGGTGCTaGAAAAGCCAAGAGATGGGA +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDPLAWC*KSQEMG
Trigger: TCCCATCTCTTGGCTTTTCCAGCACCAAGCCAGAGG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCCTCTGGCTTGGTGCTaGAAAAGCCAAGAGATGGGA +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFPLAWC*KSQEMG
Trigger: TCCCATCTCTTGGCTTTTCCAGCACCAAGCCAGAGG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAGCTGCATAAGCCTCTaGCTTGGTGCTGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTSCISL*LGAGKA
Trigger: GGCTTTTCCAGCACCAAGCCAGAGGCTTATGCAGCT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAGCTGCATAAGCCTCTaGCTTGGTGCTGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFSCISL*LGAGKA
Trigger: GGCTTTTCCAGCACCAAGCCAGAGGCTTATGCAGCT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAAGCAACTTCAGCTGTTTaGAAGTCTCTGGAATGGTTG +
Preference number: 4 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKATSAV*KSLEWL
Trigger: CAACCATTCCAGAGACTTCCAAACAGCTGAAGTTGC...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTATCCCAAGATGTTCTaGAATGGTGTGGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: RDHISLTENLTRVALSPHYPKMF*NGVEAF
Trigger: AAATGCTTCCACACCATTCCAGAACATCTTGGGATA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGTATCCCAAGATGTTCTaGAATGGTGTGGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQYPKMF*NGVEAF
Trigger: AAATGCTTCCACACCATTCCAGAACATCTTGGGATA...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACTCTGGAGGAGGTCCTaGGAAAGACACTGGTCGATA +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTLWRRS*ERHWSI
Trigger: TATCGACCAGTGTCTTTCCCAGGACCTCCTCCAGAG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCAGGTTGGTGGGGTTTaGGAGGCCGGTGTGCATGGC +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQQVGGV*EAGVHG
Trigger: GCCATGCACACCGGCCTCCCAAACCCCACCAACCTG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGGCCGTGACTGTCAGTaGGCGTGGCGTGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLGRDCQ*AWRGCS
Trigger: AGAGCATCCACGCCACGCCCACTGACAGTCACGGCC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCATCACCAGGAGCTTACTaGACATCTGACACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QLFQRSAALVELVQEIASSPGAY*TSDTPG
Trigger: ACCTGGAGTGTCAGATGTCCAGTAAGCTCCTGGTGA...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGTAAGTCAGCTCCGCTaGGTCCTTCGGGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLVSQLR*VLRAWD
Trigger: GTCCCAGGCCCGAAGGACCCAGCGGAGCTGACTTAC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGAATGAGAAAGCTGGTTaGCCAGGAGAAGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRNEKAG*PGEARE
Trigger: TTCTCTTGCTTCTCCTGGCCAACCAGCTTTCTCATT...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATGCTCTCACTGAAGTATaGTTTGACCAATGGAGACAG +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYALTEV*FDQWRQ
Trigger: CTGTCTCCATTGGTCAAACCATACTTCAGTGAGAGC...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGGATTAGCTATGTTCTaGCCTAAAGAGGGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFGLAMF*PKEGSA
Trigger: AGCCGACCCCTCTTTAGGTCAGAACATAGCTAATCC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGAGACACTACCGGTGCTaGAATCAGAGACAAATCCAT +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIARHYRC*NQRQIH
Trigger: ATGGATTTGTCTCTGATTTCAGCACCGGTAGTGTCT...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTCACCTGTTTGGAAGCTaGAGCTGGCAACCCAGAATG +
Preference number: 4 (lower is better)
Translates to: LFQRSAALVELVQEIASIHLFGS*SWQPRM
Trigger: CATTCTGGGTTGCCAGCTTCAGCTTCCAAACAGGTG...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCATGTCGAGTTGTGGGTaGGTAATATGCAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLIMSSCG*VICNFS
Trigger: GCTGAAGTTGCATATTACTCACCCACAACTCGACAT...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCGACGTACACCAAGGTaGCTGCCTGGGAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQRRTPR*LPGRHW
Trigger: CCAATGCCTCCCAGGCAGTCACCTTGGTGTACGTCG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp AGGAATCTCCAAGATGAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGTCATGGTGTCAGGCTTaGAGTCGTTCTTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RNLQDEQLFQRSAALVELSWCQA*SRSCSS
Trigger: GGAAGAACAAGAACGACTTCAAGCCTGACACCATGA...CAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTCATCTTGGAGATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCTGAGGTGGATCGCCTaGGAGAAGCGACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQLRWIA*EKRQPQ
Trigger: CTGTGGCTGTCGCTTCTCTCAGGCGATCCACCTCAG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCTCTGGACATCTGCGTaGAGGAGGCGCTGTCGTGCA +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQLWTSA*RRRCRA
Trigger: TGCACGACAGCGCCTCCTTCACGCAGATGTCCAGAG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGACTGGACATCATTGTTaGAGAGACAGAGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQTGHHC*RDRDFL
Trigger: AAGAAAATCTCTGTCTCTTCAACAATGATGTCCAGT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGTGTTTGAAGGTTCCATaGCACATCATCTCTGAACAT +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVCLKVP*HIISEH
Trigger: ATGTTCAGAGATGATGTGTCATGGAACCTTCAAACA...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGCAGGACAATGTAGCTaGTTTTATCAGACTCATACC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRAGQCS*FYQTHT
Trigger: GGTATGAGTCTGATAAAATCAGCTACATTGTCCTGC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGACCACAGTGATTTGTaGCTCCACCCTCTTAGCACT +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTDHSDL*LHPLST
Trigger: AGTGCTAAGAGGGTGGAGTCACAAATCACTGTGGTC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCACTCACAGAAAATCTaGCCAGAGTGGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDHSQKI*PEWLCL
Trigger: GAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCACCTGATGTGCAAGTaGAGATGCCCCTTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFHLMCK*RCPFSL
Trigger: CAGAGAAAAGGGGCATCTTCACTTGCACATCAGGTG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATCACATTAGTAGCACCTaGGCTAAGATCATGCAATTC +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYHISST*AKIMQF
Trigger: GAATTGCATGATCTTAGCTCAGGTGCTACTAATGTG...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATACCCCAGCTTTGATCTaGTGGGTGGATGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHTPALI*WVDAGP
Trigger: AGGTCCTGCATCCACCCAGCAGATCAAAGCTGGGGT...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCAGAGGCTAGCTTTCTaGTGGTCATTTCTATGGCCC +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFQRLAF*WSFLWP
Trigger: GGGCCATAGAAATGACCAGCAGAAAGCTAGCCTCTG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCAGAGGCTAGCTTTCTaGTGGTCATTTCTATGGCCC +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDQRLAF*WSFLWP
Trigger: GGGCCATAGAAATGACCAGCAGAAAGCTAGCCTCTG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAAGCCTCTGGCTTGGTaGTGGAAAAGCCAAGAGATG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFKPLAW*WKSQEM
Trigger: CATCTCTTGGCTTTTCCAGCACCAAGCCAGAGGCTT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGCACAGGCTGCTCAATaGTTGTACCGAGGACTAGAT +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDAQAAQ*LYRGLD
Trigger: ATCTAGTCCTCGGTACAAGCATTGAGCAGCCTGTGC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGCATGGCTGTATGTGTaGTCGTGGTATGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTAWLYV*SWYVLF
Trigger: GAACAGGACATACCACGAGCACACATACAGCCATGC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCTTGTCTGAGCAAACTTaGAGGACTGTATGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLILSEQT*RTVCCP
Trigger: CGGACAACATACAGTCCTGCAAGTTTGCTCAGACAA...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTCCTTTGTCACTTTCTaGTGTGCCATTACATTCTGG +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRSFVTF*CAITFW
Trigger: CCAGAATGTAATGGCACAGCAGAAAGTGACAAAGGA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTCCTTTGTCACTTTCTaGTGTGCCATTACATTCTGG +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYSFVTF*CAITFW
Trigger: CCAGAATGTAATGGCACAGCAGAAAGTGACAAAGGA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCAGACTCATACCATTTaGATGAACAGGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRQTHTI*MNRLSF
Trigger: GAAACTCAGCCTGTTCATGCAAATGGTATGAGTCTG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGTATCTGATTTAGCATaGTATCTTTTTAGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLVSDLA*YLFSRL
Trigger: GAGACGACTAAAAAGATAGCATGCTAAATCAGATAC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGAAGGGCCTCCCTGCCTaGCTGTTGGGATCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQKGLPA*LLGSLV
Trigger: CACCAAGGATCCCAACAGGCAGGCAGGGAGGCCCTT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAGATCCTCAAAAATTTaGCTTAGGCATCACAGAGAT +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQRSSKI*LRHHRD
Trigger: ATCTCTGTGATGCCTAAGGCAAATTTTTGAGGATCT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGGAATCTCCAAGATGAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGAGATCCTGGGCATTTTaGGATGCAGTGTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: RNLQDEQLFQRSAALVELRSWAF*DAVWSI
Trigger: AATGGACCACACTGCATCCCAAAATGCCCAGGATCT...CAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTCATCTTGGAGATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTGGAGGCTCAGCCTCATaGGTCGCTGTTTCTGTATTC +
Preference number: 4 (lower is better)
Translates to: LFQRSAALVELVQEIASIGGSAS*VAVSVF
Trigger: GAATACAGAAACAGCGACCCATGAGGCTGAGCCTCC...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCATGCTGGTCATTTCTATaGCCCCTGATTCTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: QLFQRSAALVELVQEIASCWSFL*PLILQS
Trigger: AGACTGCAGAATCAGGGGCCATAGAAATGACCAGCA...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGCATTCTTCCCTAAAATaGCTGTCACACTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVHSSLK*LSHCPF
Trigger: AAAAGGACAGTGTGACAGCCATTTTAGGGAAGAATG...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTGTTCTGGAATGGTGTaGAAGCATTTCTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIACSGMV*KHFSQV
Trigger: CACCTGAGAGAAATGCTTCCACACCATTCCAGAACA...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGTAGGTTGGTGTGAATaGGAAGGCTGTATGGACTGC +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDVGWCE*EGCMDC
Trigger: GCAGTCCATACAGCCTTCCCATTCACACCAACCTAC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGGAGGCCGGTGTGCATaGCTTGTGGTTTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQGGRCA*LVVSWG
Trigger: TCCCCAGGAAACCACAAGCCATGCACACCGGCCTCC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGCTGAGACATCGTTCTaGTGGAAAGCCTTCCGCAAT +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDAETSF*WKAFRN
Trigger: ATTGCGGAAGGCTTTCCACCAGAACGATGTCTCAGC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATTTCCTCTCGGCATCCTaGAATGCCTTCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHFLSAS*NAFCSL
Trigger: GAGGCTGCAGAAGGCATTCCAGGATGCCGAGAGGAA...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp AGGAATCTCCAAGATGAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGTGGAGTTGCAATATCTaGACTCAGTGGCACAGACTG +
Preference number: 4 (lower is better)
Translates to: RNLQDEQLFQRSAALVELWSCNI*TQWHRL
Trigger: CAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCA...CAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTCATCTTGGAGATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTCACCTGTCGAGACCTaGAATAGCCCCGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLSPVET*NSPGAQ
Trigger: CTGAGCCCCGGGGCTATTCCAGGTCTCGACAGGTGA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCCGCAGTGGAGATGTTaGTCAGGGGAGCGTCAGACG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQPQWRC*SGERQT
Trigger: CGTCTGACGCTCCCCTGACCAACATCTCCACTGCGG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTCACCTTTTCAGAAATaGAGGGTGAGAAAGACTCAC +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYSPFQK*RVRKTH
Trigger: GTGAGTCTTTCTCACCCTCCATTTCTGAAAAGGTGA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTCACCTTTTCAGAAATaGAGGGTGAGAAAGACTCAC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRSPFQK*RVRKTH
Trigger: GTGAGTCTTTCTCACCCTCCATTTCTGAAAAGGTGA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCTCAGGTTTCTTGGCTaGAGTCAGTGTCTCCCTTAC +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFLRFLG*SQCLPY
Trigger: GTAAGGGAGACACTGACTCCAGCCAAGAAACCTGAG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTTAACTAGGGGGAACTaGCTAACTCCATACGCTTTT +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRLTRGN*LTPYAF
Trigger: AAAAGCGTATGGAGTTAGCCAGTTCCCCCTAGTTAA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATAAGCTAGATGGGTCATaGGTGAAAGCAGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDKLDGS*VKAGQD
Trigger: GTCCTGTCCTGCTTTCACCCATGACCCATCTAGCTT...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAAGCTAGATGGGTCATaGGTGAAAGCAGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFKLDGS*VKAGQD
Trigger: GTCCTGTCCTGCTTTCACCCATGACCCATCTAGCTT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAGTCACTCCACTTCGTaGTACTTCTGCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFSHSTS*YFCFLL
Trigger: GAGGAGGAAGCAGAAGTACCACGAAGTGGAGTGACT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGGCTGTATCAATAACTaGTGGTGGGGTGAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDGCINN*WWGEKW
Trigger: CCACTTCTCACCCCACCACCAGTTATTGATACAGCC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACATTTCTATGGCCCCTaGTTCTGCAGTCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTHFYGP*FCSLEK
Trigger: CTTTTCCAGACTGCAGAATCAGGGGCCATAGAAATG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGATTAGGAACTTTGCTTaGGAGGAGCAAGTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIAIRNFA*EEQVSS
Trigger: ACTAGAGACTTGCTCCTCTCAAGCAAAGTTCCTAAT...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGTATCTTTGAAATCCTaGGATTTTATGGCATCGGCA +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRVSLKS*DFMASA
Trigger: TGCCGATGCCATAAAATCTCAGGATTTCAAAGATAC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCCGAGGACTAGATCCTaGATACTAAACCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDPRTRS*ILNPSA
Trigger: TGCAGAAGGGTTTAGTATTCAGGATCTAGTCCTCGG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCATTTCTTGGGGTGCTaGGAAGCCCGCAGCACTCTG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQHFLGC*EARSTL
Trigger: CAGAGTGCTGCGGGCTTCTCAGCACCCCAAGAAATG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCACTTCAAGGATTCACTaGTCTGCACTCTCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFTSRIH*SALSFG
Trigger: CCCAAAGGAGAGTGCAGATCAGTGAATCCTTGAAGT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATCCAACTGTGACATTATaGGAATATTCCAGAATGTCC +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYPTVTL*EYSRMS
Trigger: GGACATTCTGGAATATTCTCATAATGTCACAGTTGG...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTGGCGACGGTGCCGTTaGGGAATGTGCTCTGATTGC +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLWRRCR*GMCSDC
Trigger: GCAATCAGAGCACATTCCTCAACGGCACCGTCGCCA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTGTTCACCTCGCCGTTaGGGACTGCCGATGACTCCT +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLCSPRR*GLPMTP
Trigger: AGGAGTCATCGGCAGTCCTCAACGGCGAGGTGAACA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTGTTCACCTCGCCGTTaGGGACTGCCGATGACTCCT +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQCSPRR*GLPMTP
Trigger: AGGAGTCATCGGCAGTCCTCAACGGCGAGGTGAACA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTGTGCATCTGCTGCCTaGCCTCGTCGATGGATGGCT +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQCASAA*PRRWMA
Trigger: AGCCATCCATCGACGAGGTCAGGCAGCAGATGCACA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGAACAAGAGACTTGTTTaGAGGTTCCATGACACATCA +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRNKRLV*RFHDTS
Trigger: TGATGTGTCATGGAACCTTCAAACAAGTCTCTTGTT...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATCCTTGAGGCACTTTTaGCCATCTCTTAGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTSLRHF*PSLRVS
Trigger: GCTGACTCTAAGAGATGGTCAAAAGTGCCTCAAGGA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTCCTTGAGGCACTTTTaGCCATCTCTTAGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDSLRHF*PSLRVS
Trigger: GCTGACTCTAAGAGATGGTCAAAAGTGCCTCAAGGA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTTACATAATCTACCCTaGAAGAGGAAACTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRLHNLP*KRKLLA
Trigger: AGCAAGGAGTTTCCTCTTTCAGGGTAGATTATGTAA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCTACTCCAAGCTAAATaGCACTCTTTCCTTAAGAGT +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRLLQAK*HSFLKS
Trigger: ACTCTTAAGGAAAGAGTGTCATTTAGCTTGGAGTAG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCCTTTGAGGTTGGACTaGATGGCAGAATTTAATTTC +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRPLRLD*MAEFNF
Trigger: GAAATTAAATTCTGCCATTCAGTCCAACCTCAAAGG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATCCTTTGAGGTTGGACTaGATGGCAGAATTTAATTTC +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYPLRLD*MAEFNF
Trigger: GAAATTAAATTCTGCCATTCAGTCCAACCTCAAAGG...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTCAGAGATGATGGAATaGGGTGAGTCAGGAGCCAAT +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDSEMME*GESGAN
Trigger: ATTGGCTCCTGACTCACCTCATTCCATCATCTCTGA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCTGGGCATTTTGGGATaGAGTGTGGTCCATTTCATC +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFLGILG*SVVHFI
Trigger: GATGAAATGGACCACACTGCATCCCAAAATGCCCAG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATGACTGTTGCACAGGCTaGTCAATGCTTGTACCGAGG +
Preference number: 4 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHDCCTG*SMLVPR
Trigger: CCTCGGTACAAGCATTGAGCAGCCTGTGCAACAGTC...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGTCATGTCTGACTGTTaGACAGGCTGCTCAATGCTT +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDVMSDC*TGCSML
Trigger: AAGCATTGAGCAGCCTGTGCAACAGTCAGACATGAC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCATGGAATGGTTGTTATTaGTTGTGGGCCAGAGGTCTA +
Preference number: 4 (lower is better)
Translates to: QLFQRSAALVELVQEIASWNGCY*LWARGL
Trigger: TAGACCTCTGGCCCACAAGCAATAACAACCATTCCA...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATGTGTTGCTTCAGGTCTaGAGTGACGTTGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHVLLQV*SDVADS
Trigger: GGAGTCAGCAACGTCACTGCAGACCTGAAGCAACAC...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp AGGAATCTCCAAGATGAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGATTTCAGAGATCTGCTaGCTTAGTGGAACTGGTGCA +
Preference number: 4 (lower is better)
Translates to: RNLQDEQLFQRSAALVELISEIC*LSGTGA
Trigger: TGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAAT...CAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTCATCTTGGAGATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTCCTCATCTGCCCCTTaGTGGCCCAGGTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQSSSAP*WPRCCL
Trigger: CAAGCAACACCTGGGCCAGCAAGGGGCAGATGAGGA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTCTGGATCCAAAACATaGTCCATTTCCTTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFSGSKT*SISFGA
Trigger: AGCCCCGAAGGAAATGGAGCATGTTTTGGATCCAGA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCGGCCATTCTGGTCTTaGTGCCGATGTCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQRPFWS*CRCLRW
Trigger: CCACCTCAGACATCGGCAGCAAGACCAGAATGGCCG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCTTAATCCACACTCCTaGATTGCCTTTAACACAGAA +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRLNPHS*IAFNTE
Trigger: TTCTGTGTTAAAGGCAATGCAGGAGTGTGGATTAAG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGCTTTGTTCATTCAAGTaGATTGAATGCCTATGTGGA +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVLCSFK*IECLCG
Trigger: TCCACATAGGCATTCAATGCACTTGAATGAACAAAG...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGTATCTGATTTAGCATaGTATCTTTTTAGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQVSDLA*YLFSRL
Trigger: GAGACGACTAAAAAGATAGCATGCTAAATCAGATAC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGAGATCCTCAAAAATTTaGCTTAGGCATCACAGAGAT +
Preference number: 4 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVRSSKI*LRHHRD
Trigger: ATCTCTGTGATGCCTAAGGCAAATTTTTGAGGATCT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTGGTTTTCTTATCCATaGAAGTGTGTGGCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFWFSYP*KCVAVS
Trigger: GCTCACGGCCACACACTTGCATGGATAAGAAAACCA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGAAGAATGGCTTCAAGTaGTTGTCAAGCCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRKNGFK*LSSHFQ
Trigger: CTGAAAATGGCTTGACAAGCACTTGAAGCCATTCTT...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTTCGGCTGGAGCTGTTTaGGGAACTAACAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: LFQRSAALVELVQEIASISAGAV*GTNSTL
Trigger: CAAAGTGCTGTTAGTTCCCCAAACAGCTCCAGCCGA...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAGATCCTGGGCATTTTaGGATGCAGTGTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTRSWAF*DAVWSI
Trigger: AATGGACCACACTGCATCCCAAAATGCCCAGGATCT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCATGGGGACCCTCTGTTaGGGACAGCTCGGAATGCCA +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLMGTLC*GQLGMP
Trigger: TGGCATTCCGAGCTGTCCCCAACAGAGGGTCCCCAT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGTGTATTCTTAAAAGTTaGCAAAGACACCCCATTGTG +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVCILKS*QRHPIV
Trigger: CACAATGGGGTGTCTTTGCCAACTTTTAAGAATACA...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATCCTGATTCTGCAGTCTaGAAAAGTGGAGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHPDSAV*KSGGSA
Trigger: GGCTGAGCCTCCACTTTTCCAGACTGCAGAATCAGG...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCTTGTATGGAGAGTATaGAAGGTAGAGGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDLVWRV*KVEVVL
Trigger: CAGGACCACCTCTACCTTCCATACTCTCCATACAAG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCTTGTATGGAGAGTATaGAAGGTAGAGGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFLVWRV*KVEVVL
Trigger: CAGGACCACCTCTACCTTCCATACTCTCCATACAAG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGGAAAACAGTCTGGGTaGCTTGTATGGAGAGTATGG +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDGKQSG*LVWRVW
Trigger: CCATACTCTCCATACAAGCCACCCAGACTGTTTTCC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATAGCTGCATAAGCCTCTaGCTTGGTGCTGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHSCISL*LGAGKA
Trigger: GGCTTTTCCAGCACCAAGCCAGAGGCTTATGCAGCT...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCTGTTTGGAAGTCTCTaGAATGGTTGTTATTGCTTG +
Preference number: 4 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRLFGSL*NGCYCL
Trigger: CAAGCAATAACAACCATTCCAGAGACTTCCAAACAG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGCGGAATGTCGAGTTGTaGGTGAGTAATATGCAACTT +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIARNVEL*VSNMQL
Trigger: AAGTTGCATATTACTCACCCACAACTCGACATTCCG...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTGCTGAGACATCGTTCTaGTGGAAAGCCTTCCGCAAT +
Preference number: 4 (lower is better)
Translates to: LFQRSAALVELVQEIASIAETSF*WKAFRN
Trigger: ATTGCGGAAGGCTTTCCACCAGAACGATGTCTCAGC...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTGTATGTTGTCCGCTTaGCTCACAAACTGCAGCACT +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDCMLSA*LTNCST
Trigger: AGTGCTGCAGTTTGTGAGCCAAGCGGACAACATACA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGTTGTCAAGTTGCTTTTaGTATTCAGGACTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVLSSCF*YSGLSS
Trigger: AGAGGAAAGTCCTGAATACCAAAAGCAACTTGACAA...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGACCAAGGTGACTGCCTaGGAGGCATTGGACGTGCTC +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQTKVTA*EALDVL
Trigger: GAGCACGTCCAATGCCTCCCAGGCAGTCACCTTGGT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCCTGATATGTCAAGGTTaGGATATTCCAGTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLILICQG*DIPVVQ
Trigger: CTGAACCACTGGAATATCCCAACCTTGACATATCAG...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTTTTCCTGGGAGAAGTaGAGTTGCAATATCTGGACT +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIAFSWEK*SCNIWT
Trigger: AGTCCAGATATTGCAACTCCACTTCTCCCAGGAAAA...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGACAGAGGCTGCGGCCTaGGAAGACTGTGGTTCTACC +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQTEAAA*EDCGST
Trigger: GGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAATCATGGTCACAAAGTaGCCACCCTACCATTTCAGC +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTIMVTK*PPYHFS
Trigger: GCTGAAATGGTAGGGTGGCCACTTTGTGACCATGAT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACAACTTGCAACATCATaGTCACAAAGTGGCCACCCT +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTQLATS*SQSGHP
Trigger: AGGGTGGCCACTTTGTGACCATGATGTTGCAAGTTG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAAAGGAAAGGTTGTGTaGAGTGGGTTCTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTKGKVV*SGFLRG
Trigger: ACCCCTCAAGAACCCACTCCACACAACCTTTCCTTT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CAA 72 bp CCACAGTCTAGAACAGCAGTTGAGGTCTCCGTTTCCTaGATGGTACTCTTTCTGGAAAAAGCCAAAATGCAT +
Preference number: 4 (lower is better)
Translates to: PQSRTAVEVSVS*MVLFLEKAKMH
Trigger: ATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTCAACTGCTGTTCTAGACTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTACATGTAGGTTGGTGTaGATGGGAAGGCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: LFQRSAALVELVQEIASITCRLV*MGRLYG
Trigger: TCCATACAGCCTTCCCATTCACACCAACCTACATGT...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGCGACGTCTCTTTCCTaGGGAGCATCTCTAATGGGC +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQATSLS*GASLMG
Trigger: GCCCATTAGAGATGCTCCTCAGGAAAGAGACGTCGC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCCTTCCTCTTGGCTTTaGGGCGCAGCTTGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQPSSWL*GAACSD
Trigger: ATCGGAACAAGCTGCGCCTCAAAGCCAAGAGGAAGG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATGGAGCACAGAGTTCTaGATCTGGATCCAAAACATG +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTWSTEF*IWIQNM
Trigger: CATGTTTTGGATCCAGATTCAGAACTCTGTGCTCCA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACCACAATCAGTTGGATaGGCCAAGAATCTAGTCGTT +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTPQSVG*AKNLVV
Trigger: AACGACTAGATTCTTGGCTCATCCAACTGATTGTGG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCACGGTCATGGTTGAATaGGAATACAGTCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFTVMVE*EYSLVL
Trigger: AAGCACCAGACTGTATTCTCATTCAACCATGACCGT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAATGACACATCATCTCTaGACATTCCAGAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTMTHHL*TFQKGQ
Trigger: CTGCCCTTTCTGGAATGTTCAGAGATGATGTGTCAT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTCAGACACTGTCTTCTaGAACATTTACGTATACTTC +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYSDTVF*NIYVYF
Trigger: GAAGTATACGTAAATGTTTCAGAAGACAGTGTCTGA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCAAGCAAGCAGGTTCGTaGACCAGGAGGTTGGGACTG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLKQAGS*TRRLGL
Trigger: CAGTCCCAACCTCCTGGTTCACGAACCTGCTTGCTT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTGTCCTTCTGCTGAGTaGGTTCTTAAATTAACAAAC +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYCPSAE*VLKLTN
Trigger: GTTTGTTAATTTAAGAACTCACTCAGCAGAAGGACA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATTCTCAGTTTGTGTGTaGGATGGGGGCGTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTFSVCV*DGGVFK
Trigger: TTTAAACACGCCCCCATCTCACACACAAACTGAGAA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGGTGAGAGGCAAACCTaGCACATCGGCTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQGERQT*HIGCFL
Trigger: CAAGAAGCAGCCGATGTGTCAGGTTTGCCTCTCACC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCGGATGGGACAGTTCTaGCATGGGGCTCAAAAACCC +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQRMGQF*HGAQKP
Trigger: GGGTTTTTGAGCCCCATGGCAGAACTGTCCCATCCG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCCGGATGGGACAGTTCTaGCATGGGGCTCAAAAACCC +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLRMGQF*HGAQKP
Trigger: GGGTTTTTGAGCCCCATGGCAGAACTGTCCCATCCG...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGGAATCTCCAAGATGAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGTCTGCAGTCACTGAATaGCCAGCAGTATCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: RNLQDEQLFQRSAALVELSAVTE*PAVSLK
Trigger: TTTCAAAGATACTGCTGGGCATTCAGTGACTGCAGA...CAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTCATCTTGGAGATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTGTGTCCATGTTTCCTTaGATGGCTGTATGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LFQRSAALVELVQEIASIVSMFP*MAVCVL
Trigger: GAGCACACATACAGCCATGCAAGGAAACATGGACAC...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGTACACCAAGGTGACTaGCTGGGAGGCATTGGACGT +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLVHQGD*LGGIGR
Trigger: ACGTCCAATGCCTCCCAGGCAGTCACCTTGGTGTAC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGAATTGTCCACACCCTaGAGCACTGTAATTACCCAA +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFELSTP*STVITQ
Trigger: TTGGGTAATTACAGTGCTGCAGGGTGTGGACAATTC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCAGGATCTTGGCAGCTaGGGTCCCCAACAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQQDLGS*GPQQRL
Trigger: AAGCCTTTGTTGGGGACCGCAGCTGCCAAGATCCTG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp AGGAATCTCCAAGATGAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTTATTTCAGAGATCTaGTGCCTTAGTGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: RNLQDEQLFQRSAALVELVISEI*CLSGTG
Trigger: ACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAAC...CAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTCATCTTGGAGATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGAGAATACAGTCTGGTaGTTAATCCACACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTENTVW*LIHTPA
Trigger: TGCAGGAGTGTGGATTAAGCACCAGACTGTATTCTC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAGGGTTTCTAGTCCTTaGAAAACTCCTTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFRVSSP*KTPCLE
Trigger: TTCCAGGCAAGGAGTTTTGCAAGGACTAGAAACCCT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAATCATATACATCCATaGAGGAGGGCGATGCTCTCA +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTNHIHP*RRAMLS
Trigger: TGAGAGCATCGCCCTCCTCCATGGATGTATATGATT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCAACATCTGTGGTTGCTaGCTTTTTCATGTCTCCTAT +
Preference number: 4 (lower is better)
Translates to: VELQYLDSVAQTEPMKLINICGC*LFHVSY
Trigger: ATAGGAGACATGAAAAAGCCAGCAACCACAGATGTT...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCTGAAGTTAAACCATTaGGAGGAGCTGTTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFLKLNH*EELLEL
Trigger: TAGCTCCAACAGCTCCTCCCAATGGTTTAACTTCAG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTATGGCTTCCAACCATaGTCATGTCTGACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDYGFQP*SCLTVA
Trigger: TGCAACAGTCAGACATGACCATGGTTGGAAGCCATA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTGGAAGTCTCTGGAATaGTTGTTATTGCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFWKSLE*LLLLVG
Trigger: GCCCACAAGCAATAACAACCATTCCAGAGACTTCCA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGCAACTTCAGCTGTTTaGAAGTCTCTGGAATGGTTG +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTATSAV*KSLEWL
Trigger: CAACCATTCCAGAGACTTCCAAACAGCTGAAGTTGC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTGTTCTGGAATGGTGTaGAAGCATTTCTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDCSGMV*KHFSQV
Trigger: CACCTGAGAGAAATGCTTCCACACCATTCCAGAACA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTGTATGGACTGCCCCTaGTGTCCTCTTTGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQCMDCP*CPLWAR
Trigger: TCTGGCCCAAAGAGGACACCAGGGGCAGTCCATACA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTTGTCAAGTTGCTTTTaGTATTCAGGACTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYLSSCF*YSGLSS
Trigger: AGAGGAAAGTCCTGAATACCAAAAGCAACTTGACAA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCTCAGCAGCACACACTaGACATCATTGTTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFLSSTH*TSLLKR
Trigger: TCTCTTCAACAATGATGTCCAGTGTGTGCTGCTGAG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTCACTCAGTATTTCCTaGGGCTCTGTAAAGACCACA +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDSLSIS*GSVKTT
Trigger: TGTGGTCTTTACAGAGCCCCAGGAAATACTGAGTGA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATCACTCAGTATTTCCTaGGGCTCTGTAAAGACCACA +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTSLSIS*GSVKTT
Trigger: TGTGGTCTTTACAGAGCCCCAGGAAATACTGAGTGA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAATGCTAGTCAGAGCGTaGTGGGTACTGAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTMLVRA*WVLKRK
Trigger: TTTCCTTTTCAGTACCCACCACGCTCTGACTAGCAT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATATGCTAGTCAGAGCGTaGTGGGTACTGAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDMLVRA*WVLKRK
Trigger: TTTCCTTTTCAGTACCCACCACGCTCTGACTAGCAT...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGATGAGGGATGCCTATaGGATCCTGGGCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLDEGCL*DPGHFG
Trigger: CCCAAAATGCCCAGGATCTCATAGGCATCCCTCATC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGAGCTTACTGGACATCTaGCACTCCAGGTTGGATGCC +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQSLLDI*HSRLDA
Trigger: GGCATCCAACCTGGAGTGTCAGATGTCCAGTAAGCT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACACAGCCATTGGTACTaGCTTTCATCCAGTTCATTT +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTHSHWY*LSSSSF
Trigger: AAATGAACTGGATGAAAGTCAGTACCAATGGCTGTG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTGCCTGGAACACCTTTaGGGTTGGACTGAATGGCAG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQCLEHL*GWTEWQ
Trigger: CTGCCATTCAGTCCAACCTCAAAGGTGTTCCAGGCA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCACATTAGTAGCACCTaGGCTAAGATCATGCAATTC +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDHISST*AKIMQF
Trigger: GAATTGCATGATCTTAGCTCAGGTGCTACTAATGTG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGGAGCTGCTGACAAATaGAGCGGGTTAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQGAADK*SGLAES
Trigger: TGACTCTGCTAACCCGCTGCATTTGTCAGCAGCTCC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGATGGTCCACAGCAGCTaGATAAGCCTCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQMVHSS*ISLWLG
Trigger: ACCAAGCCAGAGGCTTATGCAGCTGCTGTGGACCAT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGAAAACATCTGTGGTTaGTGGCTTTTTCATGTCTCC +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFENICG*WLFHVS
Trigger: GGAGACATGAAAAAGCCAGCAACCACAGATGTTTTC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCATCTGAAAGCATTTCCTaGAAGCTACCTGTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: QLFQRSAALVELVQEIASSESIS*KLPVEV
Trigger: AACTTCTACAGGTAGCTTGCAGGAAATGCTTTCAGA...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGGTATGTCCTGTTCTTaGATACATGTAGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFGMSCS*IHVGWC
Trigger: ACACCAACCTACATGTATGCAAGAACAGGACATACC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGGAATGTGCTCTGATTaGCCACGACGTACACCAAGG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQGMCSD*PRRTPR
Trigger: CCTTGGTGTACGTCGTGGGCAATCAGAGCACATTCC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTGAATTGTCCACACCCTaGAGCACTGTAATTACCCAA +
Preference number: 4 (lower is better)
Translates to: LFQRSAALVELVQEIASIELSTP*STVITQ
Trigger: TTGGGTAATTACAGTGCTGCAGGGTGTGGACAATTC...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATTGGGAGAAGTGGAGTTaGAATATCTGGACTCAGTGG +
Preference number: 4 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHWEKWS*NIWTQW
Trigger: CCACTGAGTCCAGATATTGCAACTCCACTTCTCCCA...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCACATTTCTCTTCCTTaGCTCCTCCTTTGTCACTTT +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDHISLP*LLLCHF
Trigger: AAAGTGACAAAGGAGGAGGCAAGGAAGAGAAATGTG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGAGCATGTGCATCTGCTaGCTGACCTCGTCGATGGAT +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQSMCIC*LTSSMD
Trigger: ATCCATCGACGAGGTCAGGCAGCAGATGCACATGCT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCAGCATGTGCATCTGCTaGCTGACCTCGTCGATGGAT +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLSMCIC*LTSSMD
Trigger: ATCCATCGACGAGGTCAGGCAGCAGATGCACATGCT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGAAAGACTCACCCATTaGTATGTCTCAAGTCCTAAC +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDERLTH*YVSSPN
Trigger: GTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGAGGGTGTTTGTTCATTaGTGCCTCCTCAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQRVFVH*CLLRAL
Trigger: GAGAGCCCTGAGGAGGCAGCAATGAACAAACACCCT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGGAGGCTCAGCCTCATaGGTCGCTGTTTCTGTATTC +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQGGSAS*VAVSVF
Trigger: GAATACAGAAACAGCGACCCATGAGGCTGAGCCTCC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCCCTGATTCTGCAGTCTaGAAAAGTGGAGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLPDSAV*KSGGSA
Trigger: GGCTGAGCCTCCACTTTTCCAGACTGCAGAATCAGG...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATCTTGTATGGAGAGTATaGAAGGTAGAGGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHLVWRV*KVEVVL
Trigger: CAGGACCACCTCTACCTTCCATACTCTCCATACAAG...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTTGGAAGTCTCTGGAATaGTTGTTATTGCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LFQRSAALVELVQEIASIWKSLE*LLLLVG
Trigger: GCCCACAAGCAATAACAACCATTCCAGAGACTTCCA...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACGGAATGTCGAGTTGTaGGTGAGTAATATGCAACTT +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTRNVEL*VSNMQL
Trigger: AAGTTGCATATTACTCACCCACAACTCGACATTCCG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCGGAATGTCGAGTTGTaGGTGAGTAATATGCAACTT +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDRNVEL*VSNMQL
Trigger: AAGTTGCATATTACTCACCCACAACTCGACATTCCG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCCTCTGGAGGAGGTCCTaGGAAAGACACTGGTCGATA +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLLWRRS*ERHWSI
Trigger: TATCGACCAGTGTCTTTCCCAGGACCTCCTCCAGAG...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCTGATATGTCAAGGTTaGGATATTCCAGTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDLICQG*DIPVVQ
Trigger: CTGAACCACTGGAATATCCCAACCTTGACATATCAG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTTACCCAATAGTCTCTaGTTGTTTCTGATATGTCAA +
Preference number: 4 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYLPNSL*LFLICQ
Trigger: TTGACATATCAGAAACAACCAGAGACTATTGGGTAA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTTGGGACTGAATCACTaGGCCAGTCACTCCACTTCG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLLGLNH*ASHSTS
Trigger: CGAAGTGGAGTGACTGGCCCAGTGATTCAGTCCCAA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCCAGAAACACCTAGATaGGGGATGCCTATGAGATCC +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQPETPR*GMPMRS
Trigger: GGATCTCATAGGCATCCCTCATCTAGGTGTTTCTGG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGTATCTTTGAAATCCTaGGATTTTATGGCATCGGCA +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTVSLKS*DFMASA
Trigger: TGCCGATGCCATAAAATCTCAGGATTTCAAAGATAC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGAATGTCCACGTGAGCTaGGACATCGTTCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQNVHVS*DIVLVE
Trigger: TTCCACCAGAACGATGTCTCAGCTCACGTGGACATT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGCGCACGGTCATGGTTaGATGAGAATACAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLAHGHG*MRIQSG
Trigger: ACCAGACTGTATTCTCATTCAACCATGACCGTGCGC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATAACAAGAGACTTGTTTaGAGGTTCCATGACACATCA +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDNKRLV*RFHDTS
Trigger: TGATGTGTCATGGAACCTTCAAACAAGTCTCTTGTT...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTTCATTCAAGTGCATTaGATGCCTATGTGGATAGAC +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDFIQVH*MPMWID
Trigger: GTCTATCCACATAGGCATTCAATGCACTTGAATGAA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCACTCACAGAAAATCTaGCCAGAGTGGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQHSQKI*PEWLCL
Trigger: GAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCTACTCCAAGCTAAATaGCACTCTTTCCTTAAGAGT +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDLLQAK*HSFLKS
Trigger: ACTCTTAAGGAAAGAGTGTCATTTAGCTTGGAGTAG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTGTGGAGTGGGTTCTTaGGGGGTGGATTTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLCGVGS*GVDFSA
Trigger: AGCTGAAAAATCCACCCCTCAAGAACCCACTCCACA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTGTGGAGTGGGTTCTTaGGGGGTGGATTTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQCGVGS*GVDFSA
Trigger: AGCTGAAAAATCCACCCCTCAAGAACCCACTCCACA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGTATTTATTGTCTGCTaGGCAAGACATTGTGCTAAC +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFVFIVC*ARHCAN
Trigger: GTTAGCACAATGTCTTGCTCAGCAGACAATAAATAC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGGTCTTATACTCATTTaGCAGATGAGGAATCAGAGA +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTGLILI*QMRNQR
Trigger: TCTCTGATTCCTCATCTGTCAAATGAGTATAAGACC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGGTCTTATACTCATTTaGCAGATGAGGAATCAGAGA +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFGLILI*QMRNQR
Trigger: TCTCTGATTCCTCATCTGTCAAATGAGTATAAGACC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGGGGACAGCTCGGAATaGCATTTTGTTGAGGATCCA +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLGDSSE*HFVEDP
Trigger: TGGATCCTCAACAAAATGGCATTCCGAGCTGTCCCC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTGAAAACATCTGTGGTTaGTGGCTTTTTCATGTCTCC +
Preference number: 4 (lower is better)
Translates to: LFQRSAALVELVQEIASIENICG*WLFHVS
Trigger: GGAGACATGAAAAAGCCAGCAACCACAGATGTTTTC...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGCACAGGCTGCTCAATaGTTGTACCGAGGACTAGAT +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLAQAAQ*LYRGLD
Trigger: ATCTAGTCCTCGGTACAAGCATTGAGCAGCCTGTGC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTCTGAAAGCATTTCCTaGAAGCTACCTGTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDSESIS*KLPVEV
Trigger: AACTTCTACAGGTAGCTTGCAGGAAATGCTTTCAGA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCCTCTTTGGGCCAGATaGGGCCTTGTTTGTGACATT +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQPLWAR*GLVCDI
Trigger: AATGTCACAAACAAGGCCGCATCTGGCCCAAAGAGG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTGGTATGTCCTGTTCTTaGATACATGTAGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LFQRSAALVELVQEIASIGMSCS*IHVGWC
Trigger: ACACCAACCTACATGTATGCAAGAACAGGACATACC...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGCATGGCTGTATGTGTaGTCGTGGTATGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLAWLYV*SWYVLF
Trigger: GAACAGGACATACCACGAGCACACATACAGCCATGC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCAGCATCTGTGTTTTCTaGTCGCAATGGTGGCAACCG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLSICVF*SQWWQP
Trigger: CGGTTGCCACCATTGCGAGCAGAAAACACAGATGCT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCCTTGCTCGTCTCCACTaGAGGGAAGTCGTAATATCC +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLLARLH*REVVIS
Trigger: GGATATTACGACTTCCCTGCAGTGGAGACGAGCAAG...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAATGGAGACAGATTCTaGCATATCACAAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFNGDRF*HITNFP
Trigger: TGGGAAGTTTGTGATATGGCAGAATCTGTCTCCATT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCCTCTCTCCATAATTTaGAAAAGTCTGACCAAAGTC +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDPLSII*KSLTKV
Trigger: GACTTTGGTCAGACTTTTGCAAATTATGGAGAGAGG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATAAGAATGGCTTCAAGTaGTTGTCAAGCCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDKNGFK*LSSHFQ
Trigger: CTGAAAATGGCTTGACAAGCACTTGAAGCCATTCTT...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATTCTGCTCAGTACTTTaGCCAATGTGTCTAATATGG +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTFCSVL*PMCLIW
Trigger: CCATATTAGACACATTGGGCAAAGTACTGAGCAGAA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAATCCTGAGATTTTATaGCATCGGCAGCTGAAGTTA +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTNPEIL*HRQLKL
Trigger: TAACTTCAGCTGCCGATGCCATAAAATCTCAGGATT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACTGTTTGGAAGTCTCTaGAATGGTTGTTATTGCTTG +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTLFGSL*NGCYCL
Trigger: CAAGCAATAACAACCATTCCAGAGACTTCCAAACAG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATCTGTATGTGTGCTCGTaGTATGTCCTGTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHLYVCS*YVLFLH
Trigger: ATGCAAGAACAGGACATACCACGAGCACACATACAG...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTCACCAGGAGCTTACTaGACATCTGACACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQSPGAY*TSDTPG
Trigger: ACCTGGAGTGTCAGATGTCCAGTAAGCTCCTGGTGA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTTACCCAATAGTCTCTaGTTGTTTCTGATATGTCAA +
Preference number: 4 (lower is better)
Translates to: EQLFQRSAALVELVQEIALPNSL*LFLICQ
Trigger: TTGACATATCAGAAACAACCAGAGACTATTGGGTAA...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAATGAGAATACAGTCTaGTGCTTAATCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFNENTV*CLIHTP
Trigger: AGGAGTGTGGATTAAGCACCAGACTGTATTCTCATT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGACCCTCTTAGCACTCTaGAGCCATAGCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQTLLAL*SHSSAN
Trigger: GTTTGCAGAGCTATGGCTCCAGAGTGCTAAGAGGGT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATAATCCATTTACAGTGTaGAGACTCAAAACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDNPFTV*RLKTSF
Trigger: GAAAGAGGTTTTGAGTCTTCACACTGTAAATGGATT...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAATCCATTTACAGTGTaGAGACTCAAAACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTNPFTV*RLKTSF
Trigger: GAAAGAGGTTTTGAGTCTTCACACTGTAAATGGATT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTCCAACTGTGACATTATaGGAATATTCCAGAATGTCC +
Preference number: 4 (lower is better)
Translates to: LFQRSAALVELVQEIASIPTVTL*EYSRMS
Trigger: GGACATTCTGGAATATTCTCATAATGTCACAGTTGG...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCAGTGTTTTGCAAACTaGTTTAGGTTTTGGACTACA +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDQCFAN*FRFWTT
Trigger: TGTAGTCCAAAACCTAAATCAGTTTGCAAAACACTG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTGTCCTTCTGCTGAGTaGGTTCTTAAATTAACAAAC +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDCPSAE*VLKLTN
Trigger: GTTTGTTAATTTAAGAACTCACTCAGCAGAAGGACA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGCTTGGCTCACAAACTaGAGCACTGTTTTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQAWLTN*STVFSW
Trigger: CCAGCTAAAAACAGTGCTGCAGTTTGTGAGCCAAGC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGGGAGGCATTGGACGTaGTCACAATCTGAATTGTCA +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLGRHWT*SQSELS
Trigger: TGACAATTCAGATTGTGAGCACGTCCAATGCCTCCC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTCTTTGAAAAGTCTGTaGATTGACAGTTTGAACCTC +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFSLKSL*IDSLNL
Trigger: GAGGTTCAAACTGTCAATGCACAGACTTTTCAAAGA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCTTTGTTCATTCAAGTaGATTGAATGCCTATGTGGA +
Preference number: 4 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDLCSFK*IECLCG
Trigger: TCCACATAGGCATTCAATGCACTTGAATGAACAAAG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGAGATCCTGGGCATTTTaGGATGCAGTGTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQRSWAF*DAVWSI
Trigger: AATGGACCACACTGCATCCCAAAATGCCCAGGATCT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTCAAAAACCCAGGTGTaGATGAACCTGCTGAATGGG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQSKTQV*MNLLNG
Trigger: CCCATTCAGCAGGTTCATCCACACCTGGGTTTTTGA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTGTATTCTTAAAAGTTaGCAAAGACACCCCATTGTG +
Preference number: 4 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFCILKS*QRHPIV
Trigger: CACAATGGGGTGTCTTTGCCAACTTTTAAGAATACA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGAAGGGGATTCGTCCTTaGTGCTGTAATGATGGGAGA +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQKGIRP*CCNDGR
Trigger: TCTCCCATCATTACAGCACCAAGGACGAATCCCCTT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGGAAAACAGTCTGGGTaGCTTGTATGGAGAGTATGG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQGKQSG*LVWRVW
Trigger: CCATACTCTCCATACAAGCCACCCAGACTGTTTTCC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTCCTTTGGGAATCAATaGTGCTCAGGATCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLSFGNQ*CSGSWQ
Trigger: CTGCCAAGATCCTGAGCACCATTGATTCCCAAAGGA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCCTGTCTCCCCATGAGTaGGATAACATGAACAGACTG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLLSPHE*DNMNRL
Trigger: CAGTCTGTTCATGTTATCCCACTCATGGGGAGACAG...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTGTATCAATAACTGGTaGTGGGGTGAGAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLCINNW*WGEKWL
Trigger: CAGCCACTTCTCACCCCACCACCAGTTATTGATACA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCATGTCGAGTTGTGGGTaGGTAATATGCAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLMSSCG*VICNFS
Trigger: GCTGAAGTTGCATATTACTCACCCACAACTCGACAT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCACGGTCATGGTTGAATaGGAATACAGTCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLTVMVE*EYSLVL
Trigger: AAGCACCAGACTGTATTCTCATTCAACCATGACCGT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTGTGCATTGACAGTTTaGACCTCCCCTTCTAATCAG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLCALTV*TSPSNQ
Trigger: CTGATTAGAAGGGGAGGTTCAAACTGTCAATGCACA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTTGTCTGAGCAAACTTaGAGGACTGTATGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQLSEQT*RTVCCP
Trigger: CGGACAACATACAGTCCTGCAAGTTTGCTCAGACAA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGAATTGTCCACACCCTaGAGCACTGTAATTACCCAA +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQELSTP*STVITQ
Trigger: TTGGGTAATTACAGTGCTGCAGGGTGTGGACAATTC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTTTATGGCAATGAGCTaGACAGACCCAGAAGATGTG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLFMAMS*TDPEDV
Trigger: CACATCTTCTGGGTCTGTGCAGCTCATTGCCATAAA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGAAAGAGGAAACTCCTTaGTCTGTAGGTAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQKEETP*SVGNSC
Trigger: GCAGCTGTTACCTACAGAGCAAGGAGTTTCCTCTTT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCTGAAGTTAAACCATTaGGAGGAGCTGTTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQLKLNH*EELLEL
Trigger: TAGCTCCAACAGCTCCTCCCAATGGTTTAACTTCAG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATAATCCTGAGATTTTATaGCATCGGCAGCTGAAGTTA +
Preference number: 4 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHNPEIL*HRQLKL
Trigger: TAACTTCAGCTGCCGATGCCATAAAATCTCAGGATT...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGCAACTTCAGCTGTTTaGAAGTCTCTGGAATGGTTG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLATSAV*KSLEWL
Trigger: CAACCATTCCAGAGACTTCCAAACAGCTGAAGTTGC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTGTTCTGGAATGGTGTaGAAGCATTTCTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLCSGMV*KHFSQV
Trigger: CACCTGAGAGAAATGCTTCCACACCATTCCAGAACA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTGCATACATGTAGGTTaGTGTGAATGGGAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLCIHVG*CEWEGC
Trigger: ACAGCCTTCCCATTCACACCAACCTACATGTATGCA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCTGTATGTGTGCTCGTaGTATGTCCTGTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQLYVCS*YVLFLH
Trigger: ATGCAAGAACAGGACATACCACGAGCACACATACAG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
3UTR CAA 72 bp AACCTGTCAATAAAATCTCGCACTGTCCACAGTGTTTaGCAAACTGATTTAGGTTTTGGACTACAACAACTG +
Preference number: 4 (lower is better)
Translates to: NLSIKSRTVHSV*QTDLGFGLQQL
Trigger: CAGTTGTTGTAGTCCAAAACCTAAATCAGTTTGCAAAACACTGTGGACAGTGCGAGATTTTATTGACAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTTCTCCCGCTTCCGGTaGTTTATTAAAATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQFSRFR*FIKMWH
Trigger: ATGCCACATTTTAATAAATCACCGGAAGCGGGAGAA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTTTAGTCGTCTCAGTTaGCTCACTCAGTATTTCCTG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQFSRLS*LTQYFL
Trigger: CAGGAAATACTGAGTGAGTCAACTGAGACGACTAAA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTTTAGTCGTCTCAGTTaGCTCACTCAGTATTTCCTG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLFSRLS*LTQYFL
Trigger: CAGGAAATACTGAGTGAGTCAACTGAGACGACTAAA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGAGTTCTTCATCTGTTaGCTGTTTTTAGACTCGGTG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLEFFIC*LFLDSV
Trigger: CACCGAGTCTAAAAACAGGCAACAGATGAAGAACTC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCAGACTCATACCATTTaGATGAACAGGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQQTHTI*MNRLSF
Trigger: GAAACTCAGCCTGTTCATGCAAATGGTATGAGTCTG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGAGGACAATGGAAGATaGGCTCAGAAGAAAATGGAT +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLEDNGR*AQKKMD
Trigger: ATCCATTTTCTTCTGAGCCCATCTTCCATTGTCCTC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTGGCCTTTGTTTAATTaGCGAGGGAAACAAAGAATC +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLWPLFN*RGKQRI
Trigger: GATTCTTTGTTTCCCTCGTCAATTAAACAAAGGCCA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCAATGGAGACAGATTCTaGCATATCACAAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLNGDRF*HITNFP
Trigger: TGGGAAGTTTGTGATATGGCAGAATCTGTCTCCATT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTTCTGCTCAGTACTTTaGCCAATGTGTCTAATATGG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLFCSVL*PMCLIW
Trigger: CCATATTAGACACATTGGGCAAAGTACTGAGCAGAA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCCATTCTTCCCTAAAATaGCTGTCACACTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLHSSLK*LSHCPF
Trigger: AAAAGGACAGTGTGACAGCCATTTTAGGGAAGAATG...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCAACATCTGTGGTTGCTaGCTTTTTCATGTCTCCTAT +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLNICGC*LFHVSY
Trigger: ATAGGAGACATGAAAAAGCCAGCAACCACAGATGTT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCCCATTCATATGCCTCTaGTTCTGTTTGATACAAATC +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLPFICL*FCLIQI
Trigger: GATTTGTATCAAACAGAATCAGAGGCATATGAATGG...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTTATTATGCCACAAATaGATCATCCTCTATACACTG +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQLLCHK*IILYTL
Trigger: CAGTGTATAGAGGATGATGCATTTGTGGCATAATAA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTTATTATGCCACAAATaGATCATCCTCTATACACTG +
Preference number: 4 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLLLCHK*IILYTL
Trigger: CAGTGTATAGAGGATGATGCATTTGTGGCATAATAA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CCA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTTACCCAATAGTCTCTaGTTGTTTCTGATATGTCAA +
Preference number: 4 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQLPNSL*LFLICQ
Trigger: TTGACATATCAGAAACAACCAGAGACTATTGGGTAA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS TCA 90 bp CCCCGGAGCGCTGGTCACCACCTCCGAATAGGGCAGGTGCTGGGCTaGGCCGTAGGCCTCTTGGTGCCGGCTCTGGCCTGCGTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: PRSAGHHLRIGQVLG*AVGLLVPALACVAR
Trigger: GCGGGCCACGCAGGCCAGAGCCGGCACCAAGAGGCCTACGGCTCAGCCCAGCACCTGCCCTATTCGGAGGTGGTGACCAGCGCTCCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp CCCACTGCACCCCGGCCCTGGGCCGCGTCATGGTCCCCGGAGCGCTaGTCACCACCTCCGAATAGGGCAGGTGCTGGGCTGAGCCGTAGG +
Preference number: 5 (lower is better)
Translates to: PTAPRPWAASWSPER*SPPPNRAGAGLSRR
Trigger: CCTACGGCTCAGCCCAGCACCTGCCCTATTCGGAGGTGGTGACCAGCGCTCCGGGGACCATGACGCGGCCCAGGGCCGGGGTGCAGTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp GGCGGTAGGTCGGCACCCACTGCACCCCGGCCCTGGGCCGCGTCATaGTCCCCGGAGCGCTGGTCACCACCTCCGAATAGGGCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: GGRSAPTAPRPWAAS*SPERWSPPPNRAGA
Trigger: AGCACCTGCCCTATTCGGAGGTGGTGACCAGCGCTCCGGGGACCATGACGCGGCCCAGGGCCGGGGTGCAGTGGGTGCCGACCTACCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp TGTGGAGGGCGCCGGGGCCTGCTCCAGGCTGGGGTGCAGGTTGGCTaGCTGGCTGTACTGACGAGGAAGCCTGGAGGGAGAGCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: CGGRRGLLQAGVQVG*LAVLTRKPGGRALG
Trigger: CCCCAGAGCTCTCCCTCCAGGCTTCCTCGTCAGTACAGCCAGCCAGCCAACCTGCACCCCAGCCTGGAGCAGGCCCCGGCGCCCTCCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp GATACATTTCTGGGCGGTAGGTCGGCACCCACTGCACCCCGGCCCTaGGCCGCGTCATGGTCCCCGGAGCGCTGGTCACCACCTCCGAAT +
Preference number: 5 (lower is better)
Translates to: DTFLGGRSAPTAPRP*AASWSPERWSPPPN
Trigger: ATTCGGAGGTGGTGACCAGCGCTCCGGGGACCATGACGCGGCCCAGGGCCGGGGTGCAGTGGGTGCCGACCTACCGCCCAGAAATGTATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS GCA 90 bp ACGGACACAGGGCCTCTGGACATCTGCGTGAAGGAGGCGCTGTCGTaGAGCTGGGCCGGCTCGGGCCCTGTAGACTCGGCCATTCTGGTC +
Preference number: 5 (lower is better)
Translates to: TDTGPLDICVKEALS*SWAGSGPVDSAILV
Trigger: GACCAGAATGGCCGAGTCTACAGGGCCCGAGCCGGCCCAGCTGCACGACAGCGCCTCCTTCACGCAGATGTCCAGAGGCCCTGTGTCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp ACAGGGCCTCTGGACATCTGCGTGAAGGAGGCGCTGTCGTGCAGCTaGGCCGGCTCGGGCCCTGTAGACTCGGCCATTCTGGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TGPLDICVKEALSCS*AGSGPVDSAILVLL
Trigger: CAGCAAGACCAGAATGGCCGAGTCTACAGGGCCCGAGCCGGCCCAGCTGCACGACAGCGCCTCCTTCACGCAGATGTCCAGAGGCCCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS GCA 90 bp AATGGATGTCAGCGCGGCCGTGACTGTCAGTGGGCGTGGCGTGGATaGTCTGGGCATCTCCAGGTTGGTGGGGTTTGGGAGGCCGGTGTG +
Preference number: 5 (lower is better)
Translates to: NGCQRGRDCQWAWRG*SGHLQVGGVWEAGV
Trigger: CACACCGGCCTCCCAAACCCCACCAACCTGGAGATGCCCAGAGCATCCACGCCACGCCCACTGACAGTCACGGCCGCGCTGACATCCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 90 bp CCCGCGGATGCCAGGCTGAAGGCCTCCTCCAGCAGCATGTGCATCTaGTGCCTGACCTCGTCGATGGATGGCTGGGAGCTCAGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: PADARLKASSSSMCI*CLTSSMDGWELSVE
Trigger: CTCCACACTGAGCTCCCAGCCATCCATCGACGAGGTCAGGCAGCAGATGCACATGCTGCTGGAGGAGGCCTTCAGCCTGGCATCCGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp CTGTCAGTGGGCGTGGCGTGGATGCTCTGGGCATCTCCAGGTTGGTaGGGTTTGGGAGGCCGGTGTGCATGGCTTGTGGTTTCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: LSVGVAWMLWASPGW*GLGGRCAWLVVSWG
Trigger: TCCCCAGGAAACCACAAGCCATGCACACCGGCCTCCCAAACCCCACCAACCTGGAGATGCCCAGAGCATCCACGCCACGCCCACTGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 90 bp CCACCTCCTCCCGGATGGCCTTCACAAGGGCCGCAGTGGAGATGTTaGTCAGGGGAGCGTCAGACGGGTCGTTTTCTGCCAGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: PPPPGWPSQGPQWRC*SGERQTGRFLPGSA
Trigger: AGCAGAGCCTGGCAGAAAACGACCCGTCTGACGCTCCCCTGACCAACATCTCCACTGCGGCCCTTGTGAAGGCCATCCGGGAGGAGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp CCAGCTTGGCCACCTCCTCCCGGATGGCCTTCACAAGGGCCGCAGTaGAGATGTTGGTCAGGGGAGCGTCAGACGGGTCGTTTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: PAWPPPPGWPSQGPQ*RCWSGERQTGRFLP
Trigger: TGGCAGAAAACGACCCGTCTGACGCTCCCCTGACCAACATCTCCACTGCGGCCCTTGTGAAGGCCATCCGGGAGGAGGTGGCCAAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS TCA 90 bp TGGCTGAGGAGGCTGCTGGCGACGGTGCCGTTGAGGAATGTGCTCTaGTTGCCCACGACGTACACCAAGGTGACTGCCTGGGAGGCATTG +
Preference number: 5 (lower is better)
Translates to: WLRRLLATVPLRNVL*LPTTYTKVTAWEAL
Trigger: CAATGCCTCCCAGGCAGTCACCTTGGTGTACGTCGTGGGCAATCAGAGCACATTCCTCAACGGCACCGTCGCCAGCAGCCTCCTCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 90 bp AGCTGGGCCAGGCGCTGCTCCATGACCCGGGCAAAGCTCTGGTTGTaGAGGCCCACCAGCGAATTGTCCACACCCTGCAGCACTGTAATT +
Preference number: 5 (lower is better)
Translates to: SWARRCSMTRAKLWL*RPTSELSTPCSTVI
Trigger: AATTACAGTGCTGCAGGGTGTGGACAATTCGCTGGTGGGCCTGCACAACCAGAGCTTTGCCCGGGTCATGGAGCAGCGCCTGGCCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 90 bp ATGAATAGCTGGGCCAGGCGCTGCTCCATGACCCGGGCAAAGCTCTaGTTGTGCAGGCCCACCAGCGAATTGTCCACACCCTGCAGCACT +
Preference number: 5 (lower is better)
Translates to: MNSWARRCSMTRAKL*LCRPTSELSTPCST
Trigger: AGTGCTGCAGGGTGTGGACAATTCGCTGGTGGGCCTGCACAACCAGAGCTTTGCCCGGGTCATGGAGCAGCGCCTGGCCCAGCTATTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 90 bp GCCCGTTTAAACCGCCGGCCTTGTTGCTGGGACATCATGAATAGCTaGGCCAGGCGCTGCTCCATGACCCGGGCAAAGCTCTGGTTGTGC +
Preference number: 5 (lower is better)
Translates to: ARLNRRPCCWDIMNS*ARRCSMTRAKLWLC
Trigger: GCACAACCAGAGCTTTGCCCGGGTCATGGAGCAGCGCCTGGCCCAGCTATTCATGATGTCCCAGCAACAAGGCCGGCGGTTTAAACGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 90 bp CCGGGGTCGCTCCCGAGTCACCAGAAGGTCCATCTCGGTTTCCCCTaGACTCGGGCTGTTCAGAGACTGCCGGCTTCTGTAGACAGAGTT +
Preference number: 5 (lower is better)
Translates to: PGSLPSHQKVHLGFP*TRAVQRLPASVDRV
Trigger: AACTCTGTCTACAGAAGCCGGCAGTCTCTGAACAGCCCGAGTCCAGGGGAAACCGAGATGGACCTTCTGGTGACTCGGGAGCGACCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp CTCCTCCAGCAGCATGTGCATCTGCTGCCTGACCTCGTCGATGGATaGCTGGGAGCTCAGTGTGGAGGTCTCCGAGTGGCCTTTCACCTG +
Preference number: 5 (lower is better)
Translates to: LLQQHVHLLPDLVDG*LGAQCGGLRVAFHL
Trigger: CAGGTGAAAGGCCACTCGGAGACCTCCACACTGAGCTCCCAGCCATCCATCGACGAGGTCAGGCAGCAGATGCACATGCTGCTGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp TCCGCTGACACATCGGCTGCTTCTTGTCCCCCTTTAGGCCCCGGTTaGACCAGGGACTCGGTAGAATCCTTGGAAGGTTCGAGGGAGGCG +
Preference number: 5 (lower is better)
Translates to: SADTSAASCPPLGPG*TRDSVESLEGSREA
Trigger: CGCCTCCCTCGAACCTTCCAAGGATTCTACCGAGTCCCTGGTCCAACCGGGGCCTAAAGGGGGACAAGAAGCAGCCGATGTGTCAGCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526400.6
CDS-3UTR CAA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCTGGGCATCTCCAGGTaGGTGGGGTTTGGGAGGCCG +
Preference number: 5 (lower is better)
Translates to: DKPAGHMARWKASRFVNQLGISR*VGFGRP
Trigger: CGGCCTCCCAAACCCCACCAACCTGGAGATGCCCAG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp TCCAGCAGCATGTGCATCTGCTGCCTGACCTCGTCGATGGATGGCTaGGAGCTCAGTGTGGAGGTCTCCGAGTGGCCTTTCACCTGTCGA +
Preference number: 5 (lower is better)
Translates to: SSSMCICCLTSSMDG*ELSVEVSEWPFTCR
Trigger: TCGACAGGTGAAAGGCCACTCGGAGACCTCCACACTGAGCTCCCAGCCATCCATCGACGAGGTCAGGCAGCAGATGCACATGCTGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCGGGCAAAGCTCTGGTaGTGCAGGCCCACCAGCGAA +
Preference number: 5 (lower is better)
Translates to: DKPAGHMARWKASRFVNQRAKLW*CRPTSE
Trigger: TTCGCTGGTGGGCCTGCACAACCAGAGCTTTGCCCG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTCACCACGGGGTCAGCTaGCAGAAGGACAACGTGATG +
Preference number: 5 (lower is better)
Translates to: PCLPVGILGAETGMHPHSHHGVS*QKDNVM
Trigger: CATCACGTTGTCCTTCTGCAAGCTGACCCCGTGGTG...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS TCA 90 bp GTGTCCGCTGCATTAGTGGCTGCACCTGTCCATTTCTTGGGGTGCTaGGAAGCCCGCAGCACTCTGGAGGAGGTCCTGGGAAAGACACTG +
Preference number: 5 (lower is better)
Translates to: VSAALVAAPVHFLGC*EARSTLEEVLGKTL
Trigger: CAGTGTCTTTCCCAGGACCTCCTCCAGAGTGCTGCGGGCTTCTCAGCACCCCAAGAAATGGACAGGTGCAGCCACTAATGCAGCGGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS TCA 90 bp ATCTGTGTTTTCTGCTCGCAATGGTGGCAACCGGGTGGCCTTCACTaGGGCTGTAATGGATGTCAGCGCGGCCGTGACTGTCAGTGGGCG +
Preference number: 5 (lower is better)
Translates to: ICVFCSQWWQPGGLH*GCNGCQRGRDCQWA
Trigger: CGCCCACTGACAGTCACGGCCGCGCTGACATCCATTACAGCCTCAGTGAAGGCCACCCGGTTGCCACCATTGCGAGCAGAAAACACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 90 bp GAGGAGCAAGTCTCTAGTTGCAGGAGGGGACCCATCACTGCCCTCTaGTGGAAGAGTGGGCATTTCTGGCACAGGAGATGGGGAGGCATG +
Preference number: 5 (lower is better)
Translates to: EEQVSSCRRGPITAL*WKSGHFWHRRWGGM
Trigger: CATGCCTCCCCATCTCCTGTGCCAGAAATGCCCACTCTTCCAGCAGAGGGCAGTGATGGGTCCCCTCCTGCAACTAGAGACTTGCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp AAACCTGACACATCGGCTGCTTCTTGTCCCCCTTTAGGCCCCGGTTaGACCAGGGACTCGGTAGAATCCTTGGAAGGTTCGAGGGAGGCG +
Preference number: 5 (lower is better)
Translates to: KPDTSAASCPPLGPG*TRDSVESLEGSREA
Trigger: CGCCTCCCTCGAACCTTCCAAGGATTCTACCGAGTCCCTGGTCCAACCGGGGCCTAAAGGGGGACAAGAAGCAGCCGATGTGTCAGGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR CAA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTCCCAGAAAGGATGGCTaGCTCTTGACCCAGTGTGGT +
Preference number: 5 (lower is better)
Translates to: PCLPVGILGAETGMHPHSPRKDG*LLTQCG
Trigger: ACCACACTGGGTCAAGAGCAAGCCATCCTTTCTGGG...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCCCAGGTTGGTGGGGTTaGGGAGGCCGGTGTGCATGG +
Preference number: 5 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPPGWWG*GGRCAW
Trigger: CCATGCACACCGGCCTCCCAAACCCCACCAACCTGG...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGCCAGGTTGGTGGGGTTaGGGAGGCCGGTGTGCATGG +
Preference number: 5 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLPGWWG*GGRCAW
Trigger: CCATGCACACCGGCCTCCCAAACCCCACCAACCTGG...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGCTGTTTTGCTTGCATaGATGGGTAGGCAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: PCLPVGILGAETGMHPHSAVLLA*MGRQRL
Trigger: CAGCCGCTGCCTACCCATCAATGCAAGCAAAACAGC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS TCA 90 bp GTGTTCTGCCGAAAGGGCGGGCCCTCTGGAATTCTCTGGAGCTGCTaGCAAATGCAGCGGGTTAGCAGAGTCATTTGCAGTGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: VFCRKGGPSGILWSC*QMQRVSRVICSGRG
Trigger: GCCTCTGCCACTGCAAATGACTCTGCTAACCCGCTGCATTTGTCAGCAGCTCCAGAGAATTCCAGAGGGCCCGCCCTTTCGGCAGAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS GCA 90 bp GATGATGATGATGATGACCGTGACCACGGCAATGGGCGCCAGCACTaGAGCGATGATCCACAGGTTATTGGGCGGGTTCTTCACCACGGG +
Preference number: 5 (lower is better)
Translates to: DDDDDDRDHGNGRQH*SDDPQVIGRVLHHG
Trigger: CCCGTGGTGAAGAACCCGCCCAATAACCTGTGGATCATCGCTGCAGTGCTGGCGCCCATTGCCGTGGTCACGGTCATCATCATCATCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 90 bp GATGGAGGTAGAGGGAGGAGTGGGGGAATGTCTGACCTTGGGGGATaGTTTGAAATGGAGGAAGTCCCTGCCCATACTGGCTGGGATGGG +
Preference number: 5 (lower is better)
Translates to: DGGRGRSGGMSDLGG*FEMEEVPAHTGWDG
Trigger: CCCATCCCAGCCAGTATGGGCAGGGACTTCCTCCATTTCAAAGCATCCCCCAAGGTCAGACATTCCCCCACTCCTCCCTCTACCTCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS CCA 90 bp CATCTCCAGGTTGGTGGGGTTTGGGAGGCCGGTGTGCATGGCTTGTaGTTTCCTGGGGAGGTAAGTTGTAGACAACAGGCCAGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: HLQVGGVWEAGVHGL*FPGEVSCRQQARGS
Trigger: ACTGCCTCTGGCCTGTTGTCTACAACTTACCTCCCCAGGAAACCACAAGCCATGCACACCGGCCTCCCAAACCCCACCAACCTGGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS-3UTR CAA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGGCAAAGACACCCCATaGTGCACTCTTCCAGGCACC +
Preference number: 5 (lower is better)
Translates to: DKPAGHMARWKASRFVNQGKDTP*CTLPGT
Trigger: GGTGCCTGGAAGAGTGCACAATGGGGTGTCTTTGCC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGCAGCCTCTGTTCCATaGTCTGAGCAAACTTGCAGG +
Preference number: 5 (lower is better)
Translates to: PCLPVGILGAETGMHPHSAASVP*SEQTCR
Trigger: CCTGCAAGTTTGCTCAGACAATGGAACAGAGGCTGC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGGCTTGAAGTCGTTCTaGTTCTTCCTGCAGAGCACG +
Preference number: 5 (lower is better)
Translates to: PCLPVGILGAETGMHPHSGLKSF*FFLQST
Trigger: CGTGCTCTGCAGGAAGAACAAGAACGACTTCAAGCC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGGCTTCCCTGATTCGTaGCTGATGACAGAGCCATTC +
Preference number: 5 (lower is better)
Translates to: PCLPVGILGAETGMHPHSGFPDS*LMTEPF
Trigger: GAATGGCTCTGTCATCAGCAACGAATCAGGGAAGCC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTTCCTTGCCTCCTCCTTaGTCACTTTCTGCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: PCLPVGILGAETGMHPHSSLPPP*SLSAVP
Trigger: TGGCACAGCAGAAAGTGACAAAGGAGGAGGCAAGGA...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCTTTCGGTCAGACCCTaGCTCGTCTCCACTGCAGGG +
Preference number: 5 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCLSVRP*LVSTAG
Trigger: CCCTGCAGTGGAGACGAGCAAGGGTCTGACCGAAAG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGCCGCAGTGGAGATGTaGGTCAGGGGAGCGTCAGAC +
Preference number: 5 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLAAVEM*VRGASD
Trigger: GTCTGACGCTCCCCTGACCAACATCTCCACTGCGGC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGCCAGGGAGGGCAACTaGCAACATCATGGTCACAAA +
Preference number: 5 (lower is better)
Translates to: PCLPVGILGAETGMHPHSAREGN*QHHGHK
Trigger: TTTGTGACCATGATGTTGCAAGTTGCCCTCCCTGGC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS TCA 90 bp GCTGGTGCCCTTAGCAACCAGGGCTGCAGACAGTGCAGGTGGACTTaGTTTCCTCAGAAACAATGTGACGGCAGCTGCTGCTGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: AGALSNQGCRQCRWT*FPQKQCDGSCCCWL
Trigger: CAGCCAACAGCAGCAGCTGCCGTCACATTGTTTCTGAGGAAATCAAGTCCACCTGCACTGTCTGCAGCCCTGGTTGCTAAGGGCACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 90 bp GCCGAAAGGGCGGGCCCTCTGGAATTCTCTGGAGCTGCTGACAAATaGAGCGGGTTAGCAGAGTCATTTGCAGTGGCAGAGGCTAGCTTT +
Preference number: 5 (lower is better)
Translates to: AERAGPLEFSGAADK*SGLAESFAVAEASF
Trigger: AAAGCTAGCCTCTGCCACTGCAAATGACTCTGCTAACCCGCTGCATTTGTCAGCAGCTCCAGAGAATTCCAGAGGGCCCGCCCTTTCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp GAGCAAGTCTCTAGTTGCAGGAGGGGACCCATCACTGCCCTCTGCTaGAAGAGTGGGCATTTCTGGCACAGGAGATGGGGAGGCATGATT +
Preference number: 5 (lower is better)
Translates to: EQVSSCRRGPITALC*KSGHFWHRRWGGMI
Trigger: AATCATGCCTCCCCATCTCCTGTGCCAGAAATGCCCACTCTTCCAGCAGAGGGCAGTGATGGGTCCCCTCCTGCAACTAGAGACTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp GTTGTACAGGGTATAGTAAGTCAGCTCCGCTGGGTCCTTCGGGCCTaGGACACGCTGCATCTTCACCATCTGCACAGTGTAGCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: VVQGIVSQLRWVLRA*DTLHLHHLHSVASQ
Trigger: CTGGGAAGCTACACTGTGCAGATGGTGAAGATGCAGCGTGTCCCAGGCCCGAAGGACCCAGCGGAGCTGACTTACTATACCCTGTACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 90 bp CAACAAAGGCTTCCCGTTGTACAGGGTATAGTAAGTCAGCTCCGCTaGGTCCTTCGGGCCTGGGACACGCTGCATCTTCACCATCTGCAC +
Preference number: 5 (lower is better)
Translates to: QQRLPVVQGIVSQLR*VLRAWDTLHLHHLH
Trigger: GTGCAGATGGTGAAGATGCAGCGTGTCCCAGGCCCGAAGGACCCAGCGGAGCTGACTTACTATACCCTGTACAACGGGAAGCCTTTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 90 bp AGCTCAGTGTGGAGGTCTCCGAGTGGCCTTTCACCTGTCGAGACCTaGAATAGCCCCGGGGCTCAGGAACTCTGTCAATGTTGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: SSVWRSPSGLSPVET*NSPGAQELCQCWFP
Trigger: AGGAAACCAACATTGACAGAGTTCCTGAGCCCCGGGGCTATTCCAGGTCTCGACAGGTGAAAGGCCACTCGGAGACCTCCACACTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTGGAACTAACAGCACTTaGGGGGATTGCTCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRGTNST*GDCSAG
Trigger: GCCAGCAGAGCAATCCCCCAAAGTGCTGTTAGTTCC...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTAAGCCACTTCCAACATaGACCATGAGGGGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: PCLPVGILGAETGMHPHSKPLPT*TMRGFH
Trigger: ATGGAAGCCCCTCATGGTCAATGTTGGAAGTGGCTT...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CATACAGACTCCTGGCCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGAGTCGGCTGTCCCAGTaGATGGTGATGCGGGAACCG +
Preference number: 5 (lower is better)
Translates to: HTDSWPLWGRIERTTEGQSRLSQ*MVMREP
Trigger: CGGTTCCCGCATCACCATCAACTGGGACAGCCGACT...CTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGAGTCGGCTGTCCCAGTaGATGGTGATGCGGGAACCG +
Preference number: 5 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLSRLSQ*MVMREP
Trigger: CGGTTCCCGCATCACCATCAACTGGGACAGCCGACT...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTAACAGTCTGGGTGGCTaGTATGGAGAGTATGGAAGG +
Preference number: 5 (lower is better)
Translates to: PCLPVGILGAETGMHPHSNSLGG*YGEYGR
Trigger: CCTTCCATACTCTCCATACAAGCCACCCAGACTGTT...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGAGGTCTGCAGTGACGTaGCTGACTCCATACACACCC +
Preference number: 5 (lower is better)
Translates to: CAITFWGERLPELGFPDSRSAVT*LTPYTP
Trigger: GGGTGTGTATGGAGTCAGCAACGTCACTGCAGACCT...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGAGCCTTGCACAGGCTTaGCTCTCTGCGGCAGGTTTA +
Preference number: 5 (lower is better)
Translates to: DKPAGHMARWKASRFVNQSLAQA*LSAAGL
Trigger: TAAACCTGCCGCAGAGAGCAAAGCCTGTGCAAGGCT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGTATCGTATCCGCTGTaGCGGATTCCACGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLVSYPL*RIPRRG
Trigger: ACCCCGGCGTGGAATCCGCAACAGCGGATACGATAC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCTGAGTCCTCAGAGTTaGGAAGTCCAGAGTCCCACG +
Preference number: 5 (lower is better)
Translates to: DKPAGHMARWKASRFVNQLSPQS*EVQSPT
Trigger: CGTGGGACTCTGGACTTCCAAACTCTGAGGACTCAG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCCCTTTAGGCCCCGGTaGGACCAGGGACTCGGTAGA +
Preference number: 5 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQPFRPR*DQGLGR
Trigger: TCTACCGAGTCCCTGGTCCAACCGGGGCCTAAAGGG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS TCA 90 bp CACTGGGCGACCTGCTCTTCCTGGTTTCAGTGGATTTGGCGGTCTTaGTGGTGCTTCCATCCTGAGCGACGTCTCTTTCCTGAGGAGCAT +
Preference number: 5 (lower is better)
Translates to: HWATCSSWFQWIWRS*WCFHPERRLFPEEH
Trigger: ATGCTCCTCAGGAAAGAGACGTCGCTCAGGATGGAAGCACCATCAAGACCGCCAAATCCACTGAAACCAGGAAGAGCAGGTCGCCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 90 bp CTCCAGGTTGGATGCCATTTTGCCAGTCGTGACCACTGCAGCCGATaGAGCAGGAAGGACAGCATCTGTGTTTTCTGCTCGCAATGGTGG +
Preference number: 5 (lower is better)
Translates to: LQVGCHFASRDHCSR*SRKDSICVFCSQWW
Trigger: CCACCATTGCGAGCAGAAAACACAGATGCTGTCCTTCCTGCTGCATCGGCTGCAGTGGTCACGACTGGCAAAATGGCATCCAACCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 90 bp CATGGGGAGGCAAGTACTGCCACAGACTGTAAGTGTGGGGTGTGTTaGTTCAGGTCTGCAGTGACGTTGCTGACTCCATACACACCCAGC +
Preference number: 5 (lower is better)
Translates to: HGEASTATDCKCGVC*FRSAVTLLTPYTPS
Trigger: GCTGGGTGTGTATGGAGTCAGCAACGTCACTGCAGACCTGAAGCAACACACCCCACACTTACAGTCTGTGGCAGTACTTGCCTCCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 90 bp GGACAACGTGATGAAGGGTCAAGGCCATCCTTTGGGAATCAATGGTaGTCAGGATCTTGGCAGCTGCGGTCCCCAACAAAGGCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: GQRDEGSRPSFGNQW*SGSWQLRSPTKASR
Trigger: ACGGGAAGCCTTTGTTGGGGACCGCAGCTGCCAAGATCCTGAGCACCATTGATTCCCAAAGGATGGCCTTGACCCTTCATCACGTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 90 bp TGGGAGAACCACTGTCTCCTGAGTCACAGGGATGACCTCCTCATCTaGCCCTTGCTGGCCCAGGTGTTGCTTGGCATAATCAAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: WENHCLLSHRDDLLI*PLLAQVLLGIIKAL
Trigger: CAAGGCTTTGATTATGCCAAGCAACACCTGGGCCAGCAAGGGGCAGATGAGGAGGTCATCCCTGTGACTCAGGAGACAGTGGTTCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 90 bp GCTGCACAGACCCAGAAGATGTGTCAAAGGGTTCAGCGGCCACCTTaGTGGAGTTGTCAAATAGAACCGCTCCCTCCTCTTCGTCACTCG +
Preference number: 5 (lower is better)
Translates to: AAQTQKMCQRVQRPP*WSCQIEPLPPLRHS
Trigger: CGAGTGACGAAGAGGAGGGAGCGGTTCTATTTGACAACTCCAGCAAGGTGGCCGCTGAACCCTTTGACACATCTTCTGGGTCTGTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 90 bp GCACAGACCCAGAAGATGTGTCAAAGGGTTCAGCGGCCACCTTGCTaGAGTTGTCAAATAGAACCGCTCCCTCCTCTTCGTCACTCGCTG +
Preference number: 5 (lower is better)
Translates to: AQTQKMCQRVQRPPC*SCQIEPLPPLRHSL
Trigger: CAGCGAGTGACGAAGAGGAGGGAGCGGTTCTATTTGACAACTCCAGCAAGGTGGCCGCTGAACCCTTTGACACATCTTCTGGGTCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS-3UTR CAA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCCAGGCACCCCAGCTTaGATCTGCTGGGTGGATGCA +
Preference number: 5 (lower is better)
Translates to: RDHISLTENLTRVALSPHPGTPA*ICWVDA
Trigger: TGCATCCACCCAGCAGATCAAAGCTGGGGTGCCTGG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTCAGGCTGCTCAATGCTaGTACCGAGGACTAGATCCT +
Preference number: 5 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRQAAQC*YRGLDP
Trigger: AGGATCTAGTCCTCGGTACAAGCATTGAGCAGCCTG...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCCAGGTTGGTGGGGTTaGGGAGGCCGGTGTGCATGG +
Preference number: 5 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRPGWWG*GGRCAW
Trigger: CCATGCACACCGGCCTCCCAAACCCCACCAACCTGG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGCTGGGCATCTCCAGGTaGGTGGGGTTTGGGAGGCCG +
Preference number: 5 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRLGISR*VGFGRP
Trigger: CGGCCTCCCAAACCCCACCAACCTGGAGATGCCCAG...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTAGGTTGGATGCCATTTaGCCAGTCGTGACCACTGCA +
Preference number: 5 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRRLDAI*PVVTTA
Trigger: TGCAGTGGTCACGACTGGCAAAATGGCATCCAACCT...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATAGGCCCACCAGCGAATaGTCCACACCCTGCAGCACT +
Preference number: 5 (lower is better)
Translates to: RDHISLTENLTRVALSPHRPTSE*STPCST
Trigger: AGTGCTGCAGGGTGTGGACAATTCGCTGGTGGGCCT...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGCGGGCAAAGCTCTGGTaGTGCAGGCCCACCAGCGAA +
Preference number: 5 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVRAKLW*CRPTSE
Trigger: TTCGCTGGTGGGCCTGCACAACCAGAGCTTTGCCCG...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGGGCTTCCCTGATTCGTaGCTGATGACAGAGCCATTC +
Preference number: 5 (lower is better)
Translates to: CAITFWGERLPELGFPDSGFPDS*LMTEPF
Trigger: GAATGGCTCTGTCATCAGCAACGAATCAGGGAAGCC...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTGCCATGTTGGTGAAATaGGTAACAATTTCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: PCLPVGILGAETGMHPHSAMLVK*VTISRE
Trigger: CTCCCGGGAAATTGTTACCAATTTCACCAACATGGC...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTGTCCCAGCACGGTCTaGATTCTGTCTGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCCPSTV*ILSAAE
Trigger: CTCAGCAGCAGACAGAATCAAGACCGTGCTGGGACA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS TCA 90 bp CGGGAACCGCCCCAGAAAGGATGGCTTGCTCTTGACCCAGTGTGGTaGTATGCAGAGAAGGCACCAAAGAAGAGGTGTGTTCTGCCGAAA +
Preference number: 5 (lower is better)
Translates to: REPPQKGWLALDPVW*YAEKAPKKRCVLPK
Trigger: TTTCGGCAGAACACACCTCTTCTTTGGTGCCTTCTCTGCATATCACCACACTGGGTCAAGAGCAAGCCATCCTTTCTGGGGCGGTTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 90 bp GTTGATGGTGATGCGGGAACCGCCCCAGAAAGGATGGCTTGCTCTTaGCCCAGTGTGGTGATATGCAGAGAAGGCACCAAAGAAGAGGTG +
Preference number: 5 (lower is better)
Translates to: VDGDAGTAPERMACS*PSVVICREGTKEEV
Trigger: CACCTCTTCTTTGGTGCCTTCTCTGCATATCACCACACTGGGTCAAGAGCAAGCCATCCTTTCTGGGGCGGTTCCCGCATCACCATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS GCA 90 bp TGTCTTCACCAGGAGCTTACTGGACATCTGACACTCCAGGTTGGATaGCATTTTGCCAGTCGTGACCACTGCAGCCGATGCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: CLHQELTGHLTLQVG*HFASRDHCSRCSRK
Trigger: CTTCCTGCTGCATCGGCTGCAGTGGTCACGACTGGCAAAATGGCATCCAACCTGGAGTGTCAGATGTCCAGTAAGCTCCTGGTGAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 90 bp CTGGCAACCCAGAATGGTCCACAGCAGCTGCATAAGCCTCTGGCTTaGTGCTGGAAAAGCCAAGAGATGGGAAAACAGTCTGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: LATQNGPQQLHKPLA*CWKSQEMGKQSGWL
Trigger: AAGCCACCCAGACTGTTTTCCCATCTCTTGGCTTTTCCAGCACCAAGCCAGAGGCTTATGCAGCTGCTGTGGACCATTCTGGGTTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp GAAGGGTCAAGGCCATCCTTTGGGAATCAATGGTGCTCAGGATCTTaGCAGCTGCGGTCCCCAACAAAGGCTTCCCGTTGTACAGGGTAT +
Preference number: 5 (lower is better)
Translates to: EGSRPSFGNQWCSGS*QLRSPTKASRCTGY
Trigger: ATACCCTGTACAACGGGAAGCCTTTGTTGGGGACCGCAGCTGCCAAGATCCTGAGCACCATTGATTCCCAAAGGATGGCCTTGACCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 90 bp GAAGGACAACGTGATGAAGGGTCAAGGCCATCCTTTGGGAATCAATaGTGCTCAGGATCTTGGCAGCTGCGGTCCCCAACAAAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: EGQRDEGSRPSFGNQ*CSGSWQLRSPTKAS
Trigger: GGAAGCCTTTGTTGGGGACCGCAGCTGCCAAGATCCTGAGCACCATTGATTCCCAAAGGATGGCCTTGACCCTTCATCACGTTGTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGAGATCCTGGGCATTTaGGGATGCAGTGTGGTCCAT +
Preference number: 5 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCEILGI*GCSVVH
Trigger: ATGGACCACACTGCATCCCAAAATGCCCAGGATCTC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGAACAGTCTGGGTGGCTaGTATGGAGAGTATGGAAGG +
Preference number: 5 (lower is better)
Translates to: PLWGRIERTTEGQSPVAVNSLGG*YGEYGR
Trigger: CCTTCCATACTCTCCATACAAGCCACCCAGACTGTT...CACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCATTGGGAGGAGCTGTaGGAGCTAAATGAGTTTCCC +
Preference number: 5 (lower is better)
Translates to: DKPAGHMARWKASRFVNQHWEEL*ELNEFP
Trigger: GGGAAACTCATTTAGCTCCAACAGCTCCTCCCAATG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGCTGGAATGGTTGTTATaGCTTGTGGGCCAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: DKPAGHMARWKASRFVNQLEWLL*LVGQRS
Trigger: AGACCTCTGGCCCACAAGCAATAACAACCATTCCAG...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATCCCCTGGTGTCCTCTTaGGGCCAGATGCGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYPLVSS*GQMRPC
Trigger: ACAAGGCCGCATCTGGCCCAAAGAGGACACCAGGGG...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGCCTGTGTGAGCCCTTaGGCGATACTGAACTTCAAG +
Preference number: 5 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCACVSP*AILNFK
Trigger: CTTGAAGTTCAGTATCGCCAAAGGGCTCACACAGGC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTTTGCAGGACTGTATGTaGTCCGCTTGGCTCACAAAC +
Preference number: 5 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRLQDCM*SAWLTN
Trigger: GTTTGTGAGCCAAGCGGACAACATACAGTCCTGCAA...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGGTCAAGGCCATCCTTaGGGAATCAATGGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCGQGHP*GINGAQ
Trigger: CTGAGCACCATTGATTCCCAAAGGATGGCCTTGACC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTGGCTTCCCTGATTCGTaGCTGATGACAGAGCCATTC +
Preference number: 5 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCGFPDS*LMTEPF
Trigger: GAATGGCTCTGTCATCAGCAACGAATCAGGGAAGCC...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTCTGGGAGAAGTGGAGTaGCAATATCTGGACTCAGTG +
Preference number: 5 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRLGEVE*QYLDSV
Trigger: CACTGAGTCCAGATATTGCAACTCCACTTCTCCCAG...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGGCATAATCAAAGCCTaGCACAGGCTTTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: DKPAGHMARWKASRFVNQGIIKA*HRLCSL
Trigger: CAGAGAGCAAAGCCTGTGCAAGGCTTTGATTATGCC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGTTCTGCTTCAGGGCTTaGTTCACCTCGCCGTTGAGG +
Preference number: 5 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLFCFRA*FTSPLR
Trigger: CCTCAACGGCGAGGTGAACAAAGCCCTGAAGCAGAA...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS TCA 90 bp TCTGCTGGAAGAGTGGGCATTTCTGGCACAGGAGATGGGGAGGCATaGTTCTCTGTGGGCTGGAGGAAAGTAAGTATGGAGGGAAAGTCG +
Preference number: 5 (lower is better)
Translates to: SAGRVGISGTGDGEA*FSVGWRKVSMEGKS
Trigger: CGACTTTCCCTCCATACTTACTTTCCTCCAGCCCACAGAGAATCATGCCTCCCCATCTCCTGTGCCAGAAATGCCCACTCTTCCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 90 bp ATATACATCCATGGAGGAGGGCGATGCTCTCACCTGTTTGGAAGCTaGAGCTGGCAACCCAGAATGGTCCACAGCAGCTGCATAAGCCTC +
Preference number: 5 (lower is better)
Translates to: IYIHGGGRCSHLFGS*SWQPRMVHSSCISL
Trigger: GAGGCTTATGCAGCTGCTGTGGACCATTCTGGGTTGCCAGCTTCAGCTTCCAAACAGGTGAGAGCATCGCCCTCCTCCATGGATGTATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 90 bp GTGTGCTCGTGGTATGTCCTGTTCTTGCATACATGTAGGTTGGTGTaGATGGGAAGGCTGTATGGACTGCCCCTGGTGTCCTCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: VCSWYVLFLHTCRLV*MGRLYGLPLVSSLG
Trigger: GCCCAAAGAGGACACCAGGGGCAGTCCATACAGCCTTCCCATTCACACCAACCTACATGTATGCAAGAACAGGACATACCACGAGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 90 bp AACAGCACTTTGGGGGATTGCTCTGCTGGCTCAGAGATGATGGAATaGGGTGAGTCAGGAGCCAATGAAGAGGATGGAGGTAGAGGGAGG +
Preference number: 5 (lower is better)
Translates to: NSTLGDCSAGSEMME*GESGANEEDGGRGR
Trigger: CCTCCCTCTACCTCCATCCTCTTCATTGGCTCCTGACTCACCTCATTCCATCATCTCTGAGCCAGCAGAGCAATCCCCCAAAGTGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS GCA 90 bp GCAACCCAGAATGGTCCACAGCAGCTGCATAAGCCTCTGGCTTGGTaGTGGAAAAGCCAAGAGATGGGAAAACAGTCTGGGTGGCTTGTA +
Preference number: 5 (lower is better)
Translates to: ATQNGPQQLHKPLAW*WKSQEMGKQSGWLV
Trigger: TACAAGCCACCCAGACTGTTTTCCCATCTCTTGGCTTTTCCAGCACCAAGCCAGAGGCTTATGCAGCTGCTGTGGACCATTCTGGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS GCA 90 bp TCTTGCATACATGTAGGTTGGTGTGAATGGGAAGGCTGTATGGACTaGCCCTGGTGTCCTCTTTGGGCCAGATGCGGCCTTGTTTGTGAC +
Preference number: 5 (lower is better)
Translates to: SCIHVGWCEWEGCMD*PWCPLWARCGLVCD
Trigger: GTCACAAACAAGGCCGCATCTGGCCCAAAGAGGACACCAGGGGCAGTCCATACAGCCTTCCCATTCACACCAACCTACATGTATGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 90 bp ATCACTGCCCTCTGCTGGAAGAGTGGGCATTTCTGGCACAGGAGATaGGGAGGCATGATTCTCTGTGGGCTGGAGGAAAGTAAGTATGGA +
Preference number: 5 (lower is better)
Translates to: ITALCWKSGHFWHRR*GGMILCGLEESKYG
Trigger: TCCATACTTACTTTCCTCCAGCCCACAGAGAATCATGCCTCCCCATCTCCTGTGCCAGAAATGCCCACTCTTCCAGCAGAGGGCAGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp ACCCAGAATGGTCCACAGCAGCTGCATAAGCCTCTGGCTTGGTGCTaGAAAAGCCAAGAGATGGGAAAACAGTCTGGGTGGCTTGTATGG +
Preference number: 5 (lower is better)
Translates to: TQNGPQQLHKPLAWC*KSQEMGKQSGWLVW
Trigger: CCATACAAGCCACCCAGACTGTTTTCCCATCTCTTGGCTTTTCCAGCACCAAGCCAGAGGCTTATGCAGCTGCTGTGGACCATTCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp GCTCGTGGTATGTCCTGTTCTTGCATACATGTAGGTTGGTGTGAATaGGAAGGCTGTATGGACTGCCCCTGGTGTCCTCTTTGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: ARGMSCSCIHVGWCE*EGCMDCPWCPLWAR
Trigger: TCTGGCCCAAAGAGGACACCAGGGGCAGTCCATACAGCCTTCCCATTCACACCAACCTACATGTATGCAAGAACAGGACATACCACGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS-3UTR CAA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGCTCGGAATGCCATTTaGTTGAGGATCCAGAAACAC +
Preference number: 5 (lower is better)
Translates to: DKPAGHMARWKASRFVNQARNAI*LRIQKH
Trigger: GTGTTTCTGGATCCTCAACAAAATGGCATTCCGAGC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACCAGGCACCCCAGCTTaGATCTGCTGGGTGGATGCA +
Preference number: 5 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKPGTPA*ICWVDA
Trigger: TGCATCCACCCAGCAGATCAAAGCTGGGGTGCCTGG...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATCCAGGCACCCCAGCTTaGATCTGCTGGGTGGATGCA +
Preference number: 5 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYPGTPA*ICWVDA
Trigger: TGCATCCACCCAGCAGATCAAAGCTGGGGTGCCTGG...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCCCAGAAAGGATGGCTaGCTCTTGACCCAGTGTGGT +
Preference number: 5 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQPRKDG*LLTQCG
Trigger: ACCACACTGGGTCAAGAGCAAGCCATCCTTTCTGGG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCATTGGGAGGAGCTGTaGGAGCTAAATGAGTTTCCC +
Preference number: 5 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCHWEEL*ELNEFP
Trigger: GGGAAACTCATTTAGCTCCAACAGCTCCTCCCAATG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCACTGGGCATCTCCAGGTaGGTGGGGTTTGGGAGGCCG +
Preference number: 5 (lower is better)
Translates to: QLFQRSAALVELVQEIASLGISR*VGFGRP
Trigger: CGGCCTCCCAAACCCCACCAACCTGGAGATGCCCAG...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp TGTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGGATCTGCACTCTCCTTaGGGTGAGAAAGAGAACTGT +
Preference number: 5 (lower is better)
Translates to: CAITFWGERLPELGFPDSDLHSP*GEKENC
Trigger: ACAGTTCTCTTTCTCACCCAAAGGAGAGTGCAGATC...CGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp CCCTGCCTGCCTGTTGGGATCCTTGGTGCTGAGACAGGAATGCACCCCCACAGTCCCAATAGTCTCTGGTaGTTTCTGATATGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: PCLPVGILGAETGMHPHSPNSLW*FLICQG
Trigger: ACCTTGACATATCAGAAACAACCAGAGACTATTGGG...ACTGTGGGGGTGCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCAGGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCCGGGCAAAGCTCTGGTaGTGCAGGCCCACCAGCGAA +
Preference number: 5 (lower is better)
Translates to: AVISEICCLSGTGARNCVRAKLW*CRPTSE
Trigger: TTCGCTGGTGGGCCTGCACAACCAGAGCTTTGCCCG...GACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTTTAAACCGCCGGCCTaGTTGCTGGGACATCATGAA +
Preference number: 5 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCFKPPA*LLGHHE
Trigger: TTCATGATGTCCCAGCAACAAGGCCGGCGGTTTAAA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCGGTCAAGGCCATCCTTaGGGAATCAATGGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPGQGHP*GINGAQ
Trigger: CTGAGCACCATTGATTCCCAAAGGATGGCCTTGACC...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCGGCTTGAAGTCGTTCTaGTTCTTCCTGCAGAGCACG +
Preference number: 5 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPGLKSF*FFLQST
Trigger: CGTGCTCTGCAGGAAGAACAAGAACGACTTCAAGCC...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGGTTCAGCGGCCACCTaGCTGGAGTTGTCAAATAGA +
Preference number: 5 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLGSAAT*LELSNR
Trigger: TCTATTTGACAACTCCAGCAAGGTGGCCGCTGAACC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCTGAGTCCTCAGAGTTaGGAAGTCCAGAGTCCCACG +
Preference number: 5 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQLSPQS*EVQSPT
Trigger: CGTGGGACTCTGGACTTCCAAACTCTGAGGACTCAG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATCTCCCTGCCTGCCTGTaGGGATCCTTGGTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYLPACL*GSLVLR
Trigger: TCTCAGCACCAAGGATCCCAACAGGCAGGCAGGGAG...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS TCA 90 bp TACTGGACATCTGACACTCCAGGTTGGATGCCATTTTGCCAGTCGTaGCCACTGCAGCCGATGCAGCAGGAAGGACAGCATCTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: YWTSDTPGWMPFCQS*PLQPMQQEGQHLCF
Trigger: AAAACACAGATGCTGTCCTTCCTGCTGCATCGGCTGCAGTGGTCACGACTGGCAAAATGGCATCCAACCTGGAGTGTCAGATGTCCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 90 bp CTCTCGGCATCCTGGAATGCCTTCTGCAGCCTCTGTTCCATTGTCTaGGCAAACTTGCAGGACTGTATGTTGTCCGCTTGGCTCACAAAC +
Preference number: 5 (lower is better)
Translates to: LSASWNAFCSLCSIV*ANLQDCMLSAWLTN
Trigger: GTTTGTGAGCCAAGCGGACAACATACAGTCCTGCAAGTTTGCTCAGACAATGGAACAGAGGCTGCAGAAGGCATTCCAGGATGCCGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 90 bp TCGTCTCCACTGCAGGGAAGTCGTAATATCCCTTCCTCTTGGCTTTaGGGCGCAGCTTGTTCCGATAGTGCTCGATGTCTGACTTCTGCT +
Preference number: 5 (lower is better)
Translates to: SSPLQGSRNIPSSWL*GAACSDSARCLTSA
Trigger: AGCAGAAGTCAGACATCGAGCACTATCGGAACAAGCTGCGCCTCAAAGCCAAGAGGAAGGGATATTACGACTTCCCTGCAGTGGAGACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 90 bp AAATTGGTAACAATTTCCCGGGAGGAAATGACTCTGGAGTCCGGGTaGCATTCATCTGTAGATTGTCTGTTCCCGGGTCGGCCTGGCCGT +
Preference number: 5 (lower is better)
Translates to: KLVTISREEMTLESG*HSSVDCLFPGRPGR
Trigger: ACGGCCAGGCCGACCCGGGAACAGACAATCTACAGATGAATGTCACCCGGACTCCAGAGTCATTTCCTCCCGGGAAATTGTTACCAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526400.6
ENST00000658780.2
CDS GCA 90 bp CAAGGCCATCCTTTGGGAATCAATGGTGCTCAGGATCTTGGCAGCTaGGGTCCCCAACAAAGGCTTCCCGTTGTACAGGGTATAGTAAGT +
Preference number: 5 (lower is better)
Translates to: QGHPLGINGAQDLGS*GPQQRLPVVQGIVS
Trigger: ACTTACTATACCCTGTACAACGGGAAGCCTTTGTTGGGGACCGCAGCTGCCAAGATCCTGAGCACCATTGATTCCCAAAGGATGGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 90 bp AGCCAAGAGATGGGAAAACAGTCTGGGTGGCTTGTATGGAGAGTATaGAAGGTAGAGGTGGTCCTGAAGGAAGGGGATTCGTCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SQEMGKQSGWLVWRV*KVEVVLKEGDSSLV
Trigger: CACCAAGGACGAATCCCCTTCCTTCAGGACCACCTCTACCTTCCATACTCTCCATACAAGCCACCCAGACTGTTTTCCCATCTCTTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp GCCTCTGGCTTGGTGCTGGAAAAGCCAAGAGATGGGAAAACAGTCTaGGTGGCTTGTATGGAGAGTATGGAAGGTAGAGGTGGTCCTGAA +
Preference number: 5 (lower is better)
Translates to: ASGLVLEKPRDGKTV*VACMESMEGRGGPE
Trigger: TTCAGGACCACCTCTACCTTCCATACTCTCCATACAAGCCACCCAGACTGTTTTCCCATCTCTTGGCTTTTCCAGCACCAAGCCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp AGGAATCATATACATCCATGGAGGAGGGCGATGCTCTCACCTGTTTaGAAGCTGAAGCTGGCAACCCAGAATGGTCCACAGCAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: RNHIHPWRRAMLSPV*KLKLATQNGPQQLH
Trigger: ATGCAGCTGCTGTGGACCATTCTGGGTTGCCAGCTTCAGCTTCCAAACAGGTGAGAGCATCGCCCTCCTCCATGGATGTATATGATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp AAGTTGGTCCTGGTGAGGTTAGCAAAAGAGGATGTGCTGGCTGGTTaGGCAACTGTAGCTGAGGATGAGACACGGAATGTCGAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: KLVLVRLAKEDVLAG*ATVAEDETRNVELW
Trigger: CCACAACTCGACATTCCGTGTCTCATCCTCAGCTACAGTTGCCCAACCAGCCAGCACATCCTCTTTTGCTAACCTCACCAGGACCAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGCAGCACTTTGGGGGATaGCTCTGCTGGCTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVQHFGG*LCWLRD
Trigger: ATCTCTGAGCCAGCAGAGCAATCCCCCAAAGTGCTG...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCAAGCCACTTCCAACATaGACCATGAGGGGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPKPLPT*TMRGFH
Trigger: ATGGAAGCCCCTCATGGTCAATGTTGGAAGTGGCTT...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGAAGCCACTTCCAACATaGACCATGAGGGGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLKPLPT*TMRGFH
Trigger: ATGGAAGCCCCTCATGGTCAATGTTGGAAGTGGCTT...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTTCAAAACCTCTTTCCTaGGAAAGGCCTGGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCSKPLS*ERPGEE
Trigger: TTCCTCTCCAGGCCTTTCCAAGGAAAGAGGTTTTGA...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGCAGGCTGCTCAATGCTaGTACCGAGGACTAGATCCT +
Preference number: 5 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQQAAQC*YRGLDP
Trigger: AGGATCTAGTCCTCGGTACAAGCATTGAGCAGCCTG...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAGGTTGGATGCCATTTaGCCAGTCGTGACCACTGCA +
Preference number: 5 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQRLDAI*PVVTTA
Trigger: TGCAGTGGTCACGACTGGCAAAATGGCATCCAACCT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCAGGCCCACCAGCGAATaGTCCACACCCTGCAGCACT +
Preference number: 5 (lower is better)
Translates to: VELQYLDSVAQTEPMKLIRPTSE*STPCST
Trigger: AGTGCTGCAGGGTGTGGACAATTCGCTGGTGGGCCT...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCAGCTGGGGGTGGTTCTaGGAGGGAAGGCTTCTCACC +
Preference number: 5 (lower is better)
Translates to: VELQYLDSVAQTEPMKLISWGWF*EGRLLT
Trigger: GGTGAGAAGCCTTCCCTCCAAGAACCACCCCCAGCT...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGCCACCTTGCTGGAGTaGTCAAATAGAACCGCTCCC +
Preference number: 5 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVATLLE*SNRTAP
Trigger: GGGAGCGGTTCTATTTGACAACTCCAGCAAGGTGGC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTTGTTCACCTCGCCGTaGAGGACTGCCGATGACTCC +
Preference number: 5 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRLFTSP*RTADDS
Trigger: GGAGTCATCGGCAGTCCTCAACGGCGAGGTGAACAA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTTGTTCACCTCGCCGTaGAGGACTGCCGATGACTCC +
Preference number: 5 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYLFTSP*RTADDS
Trigger: GGAGTCATCGGCAGTCCTCAACGGCGAGGTGAACAA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATCACGGCCCTGCCTCCTaGGTAACAGGTGATTGGACA +
Preference number: 5 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYHGPAS*VTGDWT
Trigger: TGTCCAATCACCTGTTACCAAGGAGGCAGGGCCGTG...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGACATTCATCTGTAGATaGTCTGTTCCCGGGTCGGCC +
Preference number: 5 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQTFICR*SVPGSA
Trigger: GGCCGACCCGGGAACAGACAATCTACAGATGAATGT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR CAA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGACTCGGTAGAATCCTaGGAAGGTTCGAGGGAGGCG +
Preference number: 5 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRDSVES*EGSREA
Trigger: CGCCTCCCTCGAACCTTCCAAGGATTCTACCGAGTC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS TCA 90 bp CCGGGGAAATGTCCAAGATGTGGAAAGAAGATTAGGAACTTTGCTTaGGAGGAGCAAGTCTCTAGTTGCAGGAGGGGACCCATCACTGCC +
Preference number: 5 (lower is better)
Translates to: PGKCPRCGKKIRNFA*EEQVSSCRRGPITA
Trigger: GGCAGTGATGGGTCCCCTCCTGCAACTAGAGACTTGCTCCTCTCAAGCAAAGTTCCTAATCTTCTTTCCACATCTTGGACATTTCCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS GCA 90 bp GTTGAGGAATGTGCTCTGATTGCCCACGACGTACACCAAGGTGACTaGCTGGGAGGCATTGGACGTGCTCACAATCTGAATTGTCAAGTT +
Preference number: 5 (lower is better)
Translates to: VEECALIAHDVHQGD*LGGIGRAHNLNCQV
Trigger: AACTTGACAATTCAGATTGTGAGCACGTCCAATGCCTCCCAGGCAGTCACCTTGGTGTACGTCGTGGGCAATCAGAGCACATTCCTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 90 bp AGTCATTTGCAGTGGCAGAGGCTAGCTTTCTGCTGGTCATTTCTATaGCCCCTGATTCTGCAGTCTGGAAAAGTGGAGGCTCAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: SHLQWQRLAFCWSFL*PLILQSGKVEAQPH
Trigger: ATGAGGCTGAGCCTCCACTTTTCCAGACTGCAGAATCAGGGGCCATAGAAATGACCAGCAGAAAGCTAGCCTCTGCCACTGCAAATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp CTGGCTTGGTGCTGGAAAAGCCAAGAGATGGGAAAACAGTCTGGGTaGCTTGTATGGAGAGTATGGAAGGTAGAGGTGGTCCTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: LAWCWKSQEMGKQSG*LVWRVWKVEVVLKE
Trigger: TTCCTTCAGGACCACCTCTACCTTCCATACTCTCCATACAAGCCACCCAGACTGTTTTCCCATCTCTTGGCTTTTCCAGCACCAAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp TGGTGTGAATGGGAAGGCTGTATGGACTGCCCCTGGTGTCCTCTTTaGGCCAGATGCGGCCTTGTTTGTGACATTTTTAGCAAGAGTAGT +
Preference number: 5 (lower is better)
Translates to: WCEWEGCMDCPWCPL*ARCGLVCDIFSKSS
Trigger: ACTACTCTTGCTAAAAATGTCACAAACAAGGCCGCATCTGGCCCAAAGAGGACACCAGGGGCAGTCCATACAGCCTTCCCATTCACACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS-3UTR CAA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGGAACTAACAGCACTTaGGGGGATTGCTCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRGTNST*GDCSAG
Trigger: GCCAGCAGAGCAATCCCCCAAAGTGCTGTTAGTTCC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCGGAATGCCATTTTGTaGAGGATCCAGAAACACCTA +
Preference number: 5 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCRNAIL*RIQKHL
Trigger: TAGGTGTTTCTGGATCCTCAACAAAATGGCATTCCG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGCTCGGAATGCCATTTaGTTGAGGATCCAGAAACAC +
Preference number: 5 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLARNAI*LRIQKH
Trigger: GTGTTTCTGGATCCTCAACAAAATGGCATTCCGAGC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGGGCAAAGACACCCCATaGTGCACTCTTCCAGGCACC +
Preference number: 5 (lower is better)
Translates to: EQLFQRSAALVELVQEIAGKDTP*CTLPGT
Trigger: GGTGCCTGGAAGAGTGCACAATGGGGTGTCTTTGCC...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGAGAAGATTAGGAACTTaGCTTGAGAGGAGCAAGTCT +
Preference number: 5 (lower is better)
Translates to: DKPAGHMARWKASRFVNQRRLGT*LERSKS
Trigger: AGACTTGCTCCTCTCAAGCAAAGTTCCTAATCTTCT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGCTGAAGTTAAACCATaGGGAGGAGCTGTTGGAGCT +
Preference number: 5 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQAEVKP*GGAVGA
Trigger: AGCTCCAACAGCTCCTCCCAATGGTTTAACTTCAGC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGCTGAAGTTAAACCATaGGGAGGAGCTGTTGGAGCT +
Preference number: 5 (lower is better)
Translates to: RDHISLTENLTRVALSPHAEVKP*GGAVGA
Trigger: AGCTCCAACAGCTCCTCCCAATGGTTTAACTTCAGC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CATACAGACTCCTGGCCCTTGTGGGGCAGAATAGAAAGAACGACTGAGGGTCAGAAGTCTCTGGAATGGTaGTTATTGCTTGTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: HTDSWPLWGRIERTTEGQKSLEW*LLLVGQ
Trigger: CTGGCCCACAAGCAATAACAACCATTCCAGAGACTT...CTGACCCTCAGTCGTTCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCCCCTGGTGTCCTCTTaGGGCCAGATGCGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFPLVSS*GQMRPC
Trigger: ACAAGGCCGCATCTGGCCCAAAGAGGACACCAGGGG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAGCCGGTGTGCATGGCTaGTGGTTTCCTGGGGAGGTA +
Preference number: 5 (lower is better)
Translates to: QLFQRSAALVELVQEIASAGVHG*WFPGEV
Trigger: TACCTCCCCAGGAAACCACAAGCCATGCACACCGGC...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GTGCCATTACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTTCTGATATGTCAAGGTaGGGATATTCCAGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: VPLHSGVSVSLSWASLIRSDMSR*GYSSGS
Trigger: TGAACCACTGGAATATCCCAACCTTGACATATCAGA...ACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGTAATGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGAGAGTTCTTCATCTGTaGCCTGTTTTTAGACTCGGT +
Preference number: 5 (lower is better)
Translates to: DKPAGHMARWKASRFVNQRVLHL*PVFRLG
Trigger: ACCGAGTCTAAAAACAGGCAACAGATGAAGAACTCT...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTATCCACACTCCTGCATaGCCTTTAACACAGAAACAG +
Preference number: 5 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCIHTPA*PLTQKQ
Trigger: CTGTTTCTGTGTTAAAGGCAATGCAGGAGTGTGGAT...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACACAGGCTGCCACACTaGGCGAGGGAACCAGAGTCC +
Preference number: 5 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTHRLPH*AREPES
Trigger: GGACTCTGGTTCCCTCGCCAAGTGTGGCAGCCTGTG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTGCCTGTTGGGATCCTaGGTGCTGAGACAGGAATGC +
Preference number: 5 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRCLLGS*VLRQEC
Trigger: GCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTCCTTGCAAAACTCCTaGCCTGGAACACCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: RDHISLTENLTRVALSPHSLQNS*PGTPLR
Trigger: CCTCAAAGGTGTTCCAGGCAAGGAGTTTTGCAAGGA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGGGTCTTATACTCATTaGACAGATGAGGAATCAGAG +
Preference number: 5 (lower is better)
Translates to: DKPAGHMARWKASRFVNQGSYTH*TDEESE
Trigger: CTCTGATTCCTCATCTGTCAAATGAGTATAAGACCC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACACACATCGGCTGCTTCTaGTCCCCCTTTAGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTHIGCF*SPFRPR
Trigger: CCGGGGCCTAAAGGGGGACAAGAAGCAGCCGATGTG...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR CAA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGGGGAATGTCTGACCTaGGGGGATGCTTTGAAATGG +
Preference number: 5 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVGECLT*GDALKW
Trigger: CCATTTCAAAGCATCCCCCAAGGTCAGACATTCCCC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS CCA 90 bp GGTTGTTATTGCTTGTGGGCCAGAGGTCTATATGGCTTCCAACCATaGTCATGTCTGACTGTTGCACAGGCTGCTCAATGCTTGTACCGA +
Preference number: 5 (lower is better)
Translates to: GCYCLWARGLYGFQP*SCLTVAQAAQCLYR
Trigger: TCGGTACAAGCATTGAGCAGCCTGTGCAACAGTCAGACATGACCATGGTTGGAAGCCATATAGACCTCTGGCCCACAAGCAATAACAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp ATACATGTAGGTTGGTGTGAATGGGAAGGCTGTATGGACTGCCCCTaGTGTCCTCTTTGGGCCAGATGCGGCCTTGTTTGTGACATTTTT +
Preference number: 5 (lower is better)
Translates to: IHVGWCEWEGCMDCP*CPLWARCGLVCDIF
Trigger: AAAAATGTCACAAACAAGGCCGCATCTGGCCCAAAGAGGACACCAGGGGCAGTCCATACAGCCTTCCCATTCACACCAACCTACATGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 90 bp TGTATGTGTGCTCGTGGTATGTCCTGTTCTTGCATACATGTAGGTTaGTGTGAATGGGAAGGCTGTATGGACTGCCCCTGGTGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: CMCARGMSCSCIHVG*CEWEGCMDCPWCPL
Trigger: AAGAGGACACCAGGGGCAGTCCATACAGCCTTCCCATTCACACCAACCTACATGTATGCAAGAACAGGACATACCACGAGCACACATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS-3UTR CAA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATGAGATCCTGGGCATTTaGGGATGCAGTGTGGTCCAT +
Preference number: 5 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYEILGI*GCSVVH
Trigger: ATGGACCACACTGCATCCCAAAATGCCCAGGATCTC...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCCCCAGAAAGGATGGCTaGCTCTTGACCCAGTGTGGT +
Preference number: 5 (lower is better)
Translates to: AVISEICCLSGTGARNCVPRKDG*LLTQCG
Trigger: ACCACACTGGGTCAAGAGCAAGCCATCCTTTCTGGG...GACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTCAAAACCTCTTTCCTaGGAAAGGCCTGGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: RDHISLTENLTRVALSPHSKPLS*ERPGEE
Trigger: TTCCTCTCCAGGCCTTTCCAAGGAAAGAGGTTTTGA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGCTGGAATGGTTGTTATaGCTTGTGGGCCAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVLEWLL*LVGQRS
Trigger: AGACCTCTGGCCCACAAGCAATAACAACCATTCCAG...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCTGCAACTTCAGCTGTTaGGAAGTCTCTGGAATGGTT +
Preference number: 5 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPCNFSC*EVSGMV
Trigger: AACCATTCCAGAGACTTCCAAACAGCTGAAGTTGCA...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGCCGGTGTGCATGGCTaGTGGTTTCCTGGGGAGGTA +
Preference number: 5 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTAGVHG*WFPGEV
Trigger: TACCTCCCCAGGAAACCACAAGCCATGCACACCGGC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGCCGGTGTGCATGGCTaGTGGTTTCCTGGGGAGGTA +
Preference number: 5 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFAGVHG*WFPGEV
Trigger: TACCTCCCCAGGAAACCACAAGCCATGCACACCGGC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGATCTGCACTCTCCTTaGGGTGAGAAAGAGAACTGT +
Preference number: 5 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQDLHSP*GEKENC
Trigger: ACAGTTCTCTTTCTCACCCAAAGGAGAGTGCAGATC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAATGGTGCTCAGGATCTaGGCAGCTGCGGTCCCCAAC +
Preference number: 5 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTMVLRI*AAAVPN
Trigger: GTTGGGGACCGCAGCTGCCAAGATCCTGAGCACCAT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATATGGTGCTCAGGATCTaGGCAGCTGCGGTCCCCAAC +
Preference number: 5 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDMVLRI*AAAVPN
Trigger: GTTGGGGACCGCAGCTGCCAAGATCCTGAGCACCAT...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAATCCTTGCCTCCTCCTTaGTCACTTTCTGCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKSLPPP*SLSAVP
Trigger: TGGCACAGCAGAAAGTGACAAAGGAGGAGGCAAGGA...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATGCACATTTCTCTTCCTaGCCTCCTCCTTTGTCACTT +
Preference number: 5 (lower is better)
Translates to: RDHISLTENLTRVALSPHAHFSS*PPPLSL
Trigger: AAGTGACAAAGGAGGAGGCAAGGAAGAGAAATGTGC...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGGTTCAGCGGCCACCTaGCTGGAGTTGTCAAATAGA +
Preference number: 5 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRGSAAT*LELSNR
Trigger: TCTATTTGACAACTCCAGCAAGGTGGCCGCTGAACC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCTTTCGGTCAGACCCTaGCTCGTCTCCACTGCAGGG +
Preference number: 5 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDLSVRP*LVSTAG
Trigger: CCCTGCAGTGGAGACGAGCAAGGGTCTGACCGAAAG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGTATCGTATCCGCTGTaGCGGATTCCACGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDVSYPL*RIPRRG
Trigger: ACCCCGGCGTGGAATCCGCAACAGCGGATACGATAC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGAAGTCAGTAGCTGTTTaGCTTGCATTGATGGGTAGG +
Preference number: 5 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLKSVAV*LALMGR
Trigger: CCTACCCATCAATGCAAGCAAAACAGCTACTGACTT...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GACAAGCCTGCAGGCCACATGGCGAGATGGAAAGCAAGCAGGTTCGTGAACCAGGTTCATTCAAGTGCATaGAATGCCTATGTGGATAGA +
Preference number: 5 (lower is better)
Translates to: DKPAGHMARWKASRFVNQVHSSA*NAYVDR
Trigger: TCTATCCACATAGGCATTCAATGCACTTGAATGAAC...CTGGTTCACGAACCTGCTTGCTTTCCATCTCGCCATGTGGCCTGCAGGCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCTCCCTGCCTGCCTGTaGGGATCCTTGGTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFLPACL*GSLVLR
Trigger: TCTCAGCACCAAGGATCCCAACAGGCAGGCAGGGAG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGTGTGGAGTGGGTTCTaGAGGGGTGGATTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRVWSGF*RGGFFS
Trigger: GCTGAAAAATCCACCCCTCAAGAACCCACTCCACAC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGTTAAAGACTCACCGGTaGGGGTTTTTCACCCAGAGT +
Preference number: 5 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQLKTHR*GFFTQS
Trigger: ACTCTGGGTGAAAAACCCCAACCGGTGAGTCTTTAA...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS TCA 90 bp GACTGTTGCACAGGCTGCTCAATGCTTGTACCGAGGACTAGATCCTaGATACTAAACCCTTCTGCAGTCACTGAATGCCCAGCAGTATCT +
Preference number: 5 (lower is better)
Translates to: DCCTGCSMLVPRTRS*ILNPSAVTECPAVS
Trigger: AGATACTGCTGGGCATTCAGTGACTGCAGAAGGGTTTAGTATTCAGGATCTAGTCCTCGGTACAAGCATTGAGCAGCCTGTGCAACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS GCA 90 bp GTTTCCTTGCATGGCTGTATGTGTGCTCGTGGTATGTCCTGTTCTTaGATACATGTAGGTTGGTGTGAATGGGAAGGCTGTATGGACTGC +
Preference number: 5 (lower is better)
Translates to: VSLHGCMCARGMSCS*IHVGWCEWEGCMDC
Trigger: GCAGTCCATACAGCCTTCCCATTCACACCAACCTACATGTATGCAAGAACAGGACATACCACGAGCACACATACAGCCATGCAAGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 90 bp TGTGTGAGCCCTTTGGCGATACTGAACTTCAAGGATTCACTGATCTaGACTCTCCTTTGGGTGAGAAAGAGAACTGTCTTCACCAGGAGC +
Preference number: 5 (lower is better)
Translates to: CVSPLAILNFKDSLI*TLLWVRKRTVFTRS
Trigger: GCTCCTGGTGAAGACAGTTCTCTTTCTCACCCAAAGGAGAGTGCAGATCAGTGAATCCTTGAAGTTCAGTATCGCCAAAGGGCTCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 90 bp AAGTCTCTGGAATGGTTGTTATTGCTTGTGGGCCAGAGGTCTATATaGCTTCCAACCATGGTCATGTCTGACTGTTGCACAGGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: KSLEWLLLLVGQRSI*LPTMVMSDCCTGCS
Trigger: TGAGCAGCCTGTGCAACAGTCAGACATGACCATGGTTGGAAGCCATATAGACCTCTGGCCCACAAGCAATAACAACCATTCCAGAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGGCAAAGACACCCCATaGTGCACTCTTCCAGGCACC +
Preference number: 5 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDGKDTP*CTLPGT
Trigger: GGTGCCTGGAAGAGTGCACAATGGGGTGTCTTTGCC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATAAGGATGGCTTGCTCTaGACCCAGTGTGGTGATATG +
Preference number: 5 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYKDGLL*TQCGDM
Trigger: CATATCACCACACTGGGTCAAGAGCAAGCCATCCTT...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTGCAACTTCAGCTGTTaGGAAGTCTCTGGAATGGTT +
Preference number: 5 (lower is better)
Translates to: RDHISLTENLTRVALSPHCNFSC*EVSGMV
Trigger: AACCATTCCAGAGACTTCCAAACAGCTGAAGTTGCA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATACACGGAATGTCGAGTaGTGGGTGAGTAATATGCAA +
Preference number: 5 (lower is better)
Translates to: RDHISLTENLTRVALSPHTRNVE*WVSNMQ
Trigger: TTGCATATTACTCACCCACAACTCGACATTCCGTGT...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCTCTCAGGTGATGAATaGATGTCACTGGAAATTTCA +
Preference number: 5 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCLSGDE*MSLEIS
Trigger: TGAAATTTCCAGTGACATCAATTCATCACCTGAGAG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATGGGCCAGATGCGGCCTaGTTTGTGACATTTTTAGCA +
Preference number: 5 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYGPDAA*FVTFLA
Trigger: TGCTAAAAATGTCACAAACAAGGCCGCATCTGGCCC...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATCCCCTGGTGTCCTCTTaGGGCCAGATGCGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHPLVSS*GQMRPC
Trigger: ACAAGGCCGCATCTGGCCCAAAGAGGACACCAGGGG...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGAGTGTCCATGTTTCCTaGCATGGCTGTATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVSVHVS*HGCMCA
Trigger: AGCACACATACAGCCATGCAAGGAAACATGGACACT...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGATCTGCACTCTCCTTaGGGTGAGAAAGAGAACTGT +
Preference number: 5 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVDLHSP*GEKENC
Trigger: ACAGTTCTCTTTCTCACCCAAAGGAGAGTGCAGATC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTTGCAGGACTGTATGTaGTCCGCTTGGCTCACAAAC +
Preference number: 5 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRLQDCM*SAWLTN
Trigger: GTTTGTGAGCCAAGCGGACAACATACAGTCCTGCAA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCGCAGCCTCTGTTCCATaGTCTGAGCAAACTTGCAGG +
Preference number: 5 (lower is better)
Translates to: VELQYLDSVAQTEPMKLIAASVP*SEQTCR
Trigger: CCTGCAAGTTTGCTCAGACAATGGAACAGAGGCTGC...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTATGGTGCTCAGGATCTaGGCAGCTGCGGTCCCCAAC +
Preference number: 5 (lower is better)
Translates to: LFQRSAALVELVQEIASIMVLRI*AAAVPN
Trigger: GTTGGGGACCGCAGCTGCCAAGATCCTGAGCACCAT...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCCCTTCCTCTTGGCTTaGAGGCGCAGCTTGTTCCGA +
Preference number: 5 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDPFLLA*RRSLFR
Trigger: TCGGAACAAGCTGCGCCTCAAAGCCAAGAGGAAGGG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCCCTTCCTCTTGGCTTaGAGGCGCAGCTTGTTCCGA +
Preference number: 5 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFPFLLA*RRSLFR
Trigger: TCGGAACAAGCTGCGCCTCAAAGCCAAGAGGAAGGG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATCGGCCATTCTGGTCTaGCTGCCGATGTCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTSAILV*LPMSEV
Trigger: CACCTCAGACATCGGCAGCAAGACCAGAATGGCCGA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTGCGCACGGTCATGGTaGAATGAGAATACAGTCTGG +
Preference number: 5 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYCARSW*NENTVW
Trigger: CCAGACTGTATTCTCATTCAACCATGACCGTGCGCA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGAGCAAGAGCAAAGGTAGCTGTCTCCATCCCTTTCCTGTAGGGGAGCCGTGTCACTGGACATCATTGTaGAAGAGACAGAGATTTTCT +
Preference number: 5 (lower is better)
Translates to: ESKSKGSCLHPFPVGEPCHWTSL*KRQRFS
Trigger: AGAAAATCTCTGTCTCTTCAACAATGATGTCCAGTG...ACACGGCTCCCCTACAGGAAAGGGATGGAGACAGCTACCTTTGCTCTTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCACGGCCCTGCCTCCTaGGTAACAGGTGATTGGACA +
Preference number: 5 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFHGPAS*VTGDWT
Trigger: TGTCCAATCACCTGTTACCAAGGAGGCAGGGCCGTG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS TCA 90 bp GCCATTTTGTTGAGGATCCAGAAACACCTAGATGAGGGATGCCTATaGGATCCTGGGCATTTTGGGATGCAGTGTGGTCCATTTCATCAG +
Preference number: 5 (lower is better)
Translates to: AILLRIQKHLDEGCL*DPGHFGMQCGPFHQ
Trigger: CTGATGAAATGGACCACACTGCATCCCAAAATGCCCAGGATCTCATAGGCATCCCTCATCTAGGTGTTTCTGGATCCTCAACAAAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp GGTTGGGCAACTGTAGCTGAGGATGAGACACGGAATGTCGAGTTGTaGGTGAGTAATATGCAACTTCAGCTGTTTGGAAGTCTCTGGAAT +
Preference number: 5 (lower is better)
Translates to: GWATVAEDETRNVEL*VSNMQLQLFGSLWN
Trigger: ATTCCAGAGACTTCCAAACAGCTGAAGTTGCATATTACTCACCCACAACTCGACATTCCGTGTCTCATCCTCAGCTACAGTTGCCCAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCAGCACTTTGGGGGATaGCTCTGCTGGCTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDQHFGG*LCWLRD
Trigger: ATCTCTGAGCCAGCAGAGCAATCCCCCAAAGTGCTG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGAGAAGATTAGGAACTTaGCTTGAGAGGAGCAAGTCT +
Preference number: 5 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQRRLGT*LERSKS
Trigger: AGACTTGCTCCTCTCAAGCAAAGTTCCTAATCTTCT...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAATCAAAACCTCTTTCCTaGGAAAGGCCTGGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKSKPLS*ERPGEE
Trigger: TTCCTCTCCAGGCCTTTCCAAGGAAAGAGGTTTTGA...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp AGCTTCTATAAACAGAGGCTGCGGCCTGGGAAGACTGTGGTTCTACCACTCCTGGCAAGCCAGATATTATaGATTCTGTGGAAAGAGATC +
Preference number: 5 (lower is better)
Translates to: SFYKQRLRPGKTVVLPLLASQIL*ILWKEI
Trigger: GATCTCTTTCCACAGAATCAATAATATCTGGCTTGC...CAGGAGTGGTAGAACCACAGTCTTCCCAGGCCGCAGCCTCTGTTTATAGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCCATTGGGAGGAGCTGTaGGAGCTAAATGAGTTTCCC +
Preference number: 5 (lower is better)
Translates to: AVISEICCLSGTGARNCVHWEEL*ELNEFP
Trigger: GGGAAACTCATTTAGCTCCAACAGCTCCTCCCAATG...GACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGCTGGAATGGTTGTTATaGCTTGTGGGCCAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: EQLFQRSAALVELVQEIALEWLL*LVGQRS
Trigger: AGACCTCTGGCCCACAAGCAATAACAACCATTCCAG...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGAAGTCTCTGGAATGGTaGTTATTGCTTGTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRKSLEW*LLLVGQ
Trigger: CTGGCCCACAAGCAATAACAACCATTCCAGAGACTT...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ATTCAGACAAGGGGTAAGGTGAGAACCCAAGGGGTACATACAGACTCCTGGCCCCTCTCAGGTGATGAATaGATGTCACTGGAAATTTCA +
Preference number: 5 (lower is better)
Translates to: IQTRGKVRTQGVHTDSWPLSGDE*MSLEIS
Trigger: TGAAATTTCCAGTGACATCAATTCATCACCTGAGAG...GGGCCAGGAGTCTGTATGTACCCCTTGGGTTCTCACCTTACCCCTTGTCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAGGTCTGCAGTGACGTaGCTGACTCCATACACACCC +
Preference number: 5 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTRSAVT*LTPYTP
Trigger: GGGTGTGTATGGAGTCAGCAACGTCACTGCAGACCT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATTCTGATATGTCAAGGTaGGGATATTCCAGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: RDHISLTENLTRVALSPHSDMSR*GYSSGS
Trigger: TGAACCACTGGAATATCCCAACCTTGACATATCAGA...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTTTAAACCGCCGGCCTaGTTGCTGGGACATCATGAA +
Preference number: 5 (lower is better)
Translates to: EQLFQRSAALVELVQEIAFKPPA*LLGHHE
Trigger: TTCATGATGTCCCAGCAACAAGGCCGGCGGTTTAAA...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTCACCACGGGGTCAGCTaGCAGAAGGACAACGTGATG +
Preference number: 5 (lower is better)
Translates to: LFQRSAALVELVQEIASIHHGVS*QKDNVM
Trigger: CATCACGTTGTCCTTCTGCAAGCTGACCCCGTGGTG...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGCCACCTTGCTGGAGTaGTCAAATAGAACCGCTCCC +
Preference number: 5 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDATLLE*SNRTAP
Trigger: GGGAGCGGTTCTATTTGACAACTCCAGCAAGGTGGC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTTCTGCTTCAGGGCTTaGTTCACCTCGCCGTTGAGG +
Preference number: 5 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDFCFRA*FTSPLR
Trigger: CCTCAACGGCGAGGTGAACAAAGCCCTGAAGCAGAA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGCTGTTTTGCTTGCATaGATGGGTAGGCAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTAVLLA*MGRQRL
Trigger: CAGCCGCTGCCTACCCATCAATGCAAGCAAAACAGC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGAAGTCAGTAGCTGTTTaGCTTGCATTGATGGGTAGG +
Preference number: 5 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVKSVAV*LALMGR
Trigger: CCTACCCATCAATGCAAGCAAAACAGCTACTGACTT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CATGCAGAGGTCACCGAAGATAAGAGCTACATTCTCCCGCTTCCGGTGATTTATTGTGCTAACTGGGCCTaGTTCAGAAATCGCTTCCTA +
Preference number: 5 (lower is better)
Translates to: HAEVTEDKSYILPLPVIYCANWA*FRNRFL
Trigger: TAGGAAGCGATTTCTGAACAAGGCCCAGTTAGCACA...ATAAATCACCGGAAGCGGGAGAATGTAGCTCTTATCTTCGGTGACCTCTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATGTGGCAAGCTTGTGTaGTCAGAGGACTGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTCGKLV*SEDCPS
Trigger: GCTGGGACAGTCCTCTGACAACACAAGCTTGCCACA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS CCA 90 bp CTGGCTTTTTCATGTCTCCTATTGTTAAGGAATCATATACATCCATaGAGGAGGGCGATGCTCTCACCTGTTTGGAAGCTGAAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: LAFSCLLLLRNHIHP*RRAMLSPVWKLKLA
Trigger: TGCCAGCTTCAGCTTCCAAACAGGTGAGAGCATCGCCCTCCTCCATGGATGTATATGATTCCTTAACAATAGGAGACATGAAAAAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp CAACTTCAGCTGTTTGGAAGTCTCTGGAATGGTTGTTATTGCTTGTaGGCCAGAGGTCTATATGGCTTCCAACCATGGTCATGTCTGACT +
Preference number: 5 (lower is better)
Translates to: QLQLFGSLWNGCYCL*ARGLYGFQPWSCLT
Trigger: AGTCAGACATGACCATGGTTGGAAGCCATATAGACCTCTGGCCCACAAGCAATAACAACCATTCCAGAGACTTCCAAACAGCTGAAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGGCTCGGAATGCCATTTaGTTGAGGATCCAGAAACAC +
Preference number: 5 (lower is better)
Translates to: EQLFQRSAALVELVQEIAARNAI*LRIQKH
Trigger: GTGTTTCTGGATCCTCAACAAAATGGCATTCCGAGC...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp AGAATAGAAAGAACGACTGAGGGTCAGAGCCCAGTGGCTGTGTGTGAGTTTGTGAGAAAACATCTGTGGTaGCTGGCTTTTTCATGTCTC +
Preference number: 5 (lower is better)
Translates to: RIERTTEGQSPVAVCEFVRKHLW*LAFSCL
Trigger: GAGACATGAAAAAGCCAGCAACCACAGATGTTTTCT...CACAAACTCACACACAGCCACTGGGCTCTGACCCTCAGTCGTTCTTTCTATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GATCATAGGTCTCAAGCCACACAATGGACCTTTACTGCACCTCCCCTGATGCAGGCAAGCCAGATATTATaGATTCTGTGGAAAGAGATC +
Preference number: 5 (lower is better)
Translates to: DHRSQATQWTFTAPPLMQASQIL*ILWKEI
Trigger: GATCTCTTTCCACAGAATCAATAATATCTGGCTTGC...CTGCATCAGGGGAGGTGCAGTAAAGGTCCATTGTGTGGCTTGAGACCTATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAGCTGAAGTTAAACCATaGGGAGGAGCTGTTGGAGCT +
Preference number: 5 (lower is better)
Translates to: QLFQRSAALVELVQEIASAEVKP*GGAVGA
Trigger: AGCTCCAACAGCTCCTCCCAATGGTTTAACTTCAGC...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGTGCAACTTCAGCTGTTaGGAAGTCTCTGGAATGGTT +
Preference number: 5 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRCNFSC*EVSGMV
Trigger: AACCATTCCAGAGACTTCCAAACAGCTGAAGTTGCA...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp AGGAATCTCCAAGATGAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGGGCCAGATGCGGCCTaGTTTGTGACATTTTTAGCA +
Preference number: 5 (lower is better)
Translates to: RNLQDEQLFQRSAALVELGPDAA*FVTFLA
Trigger: TGCTAAAAATGTCACAAACAAGGCCGCATCTGGCCC...CAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTCATCTTGGAGATTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGGTCAAGGCCATCCTTaGGGAATCAATGGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFGQGHP*GINGAQ
Trigger: CTGAGCACCATTGATTCCCAAAGGATGGCCTTGACC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGGCTTGAAGTCGTTCTaGTTCTTCCTGCAGAGCACG +
Preference number: 5 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTGLKSF*FFLQST
Trigger: CGTGCTCTGCAGGAAGAACAAGAACGACTTCAAGCC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATACTGGGCGACCTGCTTaGCTCTCTGCGGCAGGTTTA +
Preference number: 5 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHTGRPA*LSAAGL
Trigger: TAAACCTGCCGCAGAGAGCAAAGCAGGTCGCCCAGT...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGAGAGTTCTTCATCTGTaGCCTGTTTTTAGACTCGGT +
Preference number: 5 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVRVLHL*PVFRLG
Trigger: ACCGAGTCTAAAAACAGGCAACAGATGAAGAACTCT...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGCCGCAGTGGAGATGTaGGTCAGGGGAGCGTCAGAC +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQAAVEM*VRGASD
Trigger: GTCTGACGCTCCCCTGACCAACATCTCCACTGCGGC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp AGGGACCACATCTCACTCACAGAAAATCTGACCAGAGTGGCTCTGTCTCCCCATCACTGGACATCATTGTaGAAGAGACAGAGATTTTCT +
Preference number: 5 (lower is better)
Translates to: RDHISLTENLTRVALSPHHWTSL*KRQRFS
Trigger: AGAAAATCTCTGTCTCTTCAACAATGATGTCCAGTG...ATGGGGAGACAGAGCCACTCTGGTCAGATTTTCTGTGAGTGAGATGTGGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGTCACTGAAGTATGGTTaGACCAATGGAGACAGATTC +
Preference number: 5 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVSLKYG*TNGDRF
Trigger: GAATCTGTCTCCATTGGTCAAACCATACTTCAGTGA...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGAAATCTTTTCTCAGTTaGTGTGTGAGATGGGGGCGT +
Preference number: 5 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRKSFLS*CVRWGR
Trigger: ACGCCCCCATCTCACACACAAACTGAGAAAAGATTT...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS TCA 90 bp GAGACACTACCGGTGCTGAAATCAGAGACAAATCCATTTACAGTGTaGAGACTCAAAACCTCTTTCCTTGGAAAGGCCTGGAGAGGAATC +
Preference number: 5 (lower is better)
Translates to: ETLPVLKSETNPFTV*RLKTSFLGKAWRGI
Trigger: GATTCCTCTCCAGGCCTTTCCAAGGAAAGAGGTTTTGAGTCTTCACACTGTAAATGGATTTGTCTCTGATTTCAGCACCGGTAGTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 90 bp GAGTTGTGGGTGAGTAATATGCAACTTCAGCTGTTTGGAAGTCTCTaGAATGGTTGTTATTGCTTGTGGGCCAGAGGTCTATATGGCTTC +
Preference number: 5 (lower is better)
Translates to: ELWVSNMQLQLFGSL*NGCYCLWARGLYGF
Trigger: GAAGCCATATAGACCTCTGGCCCACAAGCAATAACAACCATTCCAGAGACTTCCAAACAGCTGAAGTTGCATATTACTCACCCACAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATCAGCACTTTGGGGGATaGCTCTGCTGGCTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHQHFGG*LCWLRD
Trigger: ATCTCTGAGCCAGCAGAGCAATCCCCCAAAGTGCTG...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAACTTATCCGGAATGCCATTTTGTaGAGGATCCAGAAACACCTA +
Preference number: 5 (lower is better)
Translates to: VELQYLDSVAQTEPMKLIRNAIL*RIQKHL
Trigger: TAGGTGTTTCTGGATCCTCAACAAAATGGCATTCCG...GATAAGTTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGAGTCGGCTGTCCCAGTaGATGGTGATGCGGGAACCG +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQSRLSQ*MVMREP
Trigger: CGGTTCCCGCATCACCATCAACTGGGACAGCCGACT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATAACAGTCTGGGTGGCTaGTATGGAGAGTATGGAAGG +
Preference number: 5 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDNSLGG*YGEYGR
Trigger: CCTTCCATACTCTCCATACAAGCCACCCAGACTGTT...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTGCCTGTGTGAGCCCTTaGGCGATACTGAACTTCAAG +
Preference number: 5 (lower is better)
Translates to: LFQRSAALVELVQEIASIACVSP*AILNFK
Trigger: CTTGAAGTTCAGTATCGCCAAAGGGCTCACACAGGC...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTTTAAACCGCCGGCCTaGTTGCTGGGACATCATGAA +
Preference number: 5 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFFKPPA*LLGHHE
Trigger: TTCATGATGTCCCAGCAACAAGGCCGGCGGTTTAAA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTACAGACTCCTGGCCCTaGTGGGGCAGAATAGAAAGA +
Preference number: 5 (lower is better)
Translates to: LFQRSAALVELVQEIASITDSWP*WGRIER
Trigger: TCTTTCTATTCTGCCCCACAAGGGCCAGGAGTCTGT...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGGCATAATCAAAGCCTaGCACAGGCTTTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDGIIKA*HRLCSL
Trigger: CAGAGAGCAAAGCCTGTGCAAGGCTTTGATTATGCC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCTCCTCATCTGCCCCTaGCTGGCCCAGGTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQLLICP*LAQVLL
Trigger: AAGCAACACCTGGGCCAGCAAGGGGCAGATGAGGAG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCCTGGTTTCAGTGGATTaGGCGGTCTTGATGGTGCTT +
Preference number: 5 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFLVSVD*AVLMVL
Trigger: AAGCACCATCAAGACCGCCAAATCCACTGAAACCAG...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTGCGCACGGTCATGGTaGAATGAGAATACAGTCTGG +
Preference number: 5 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDCARSW*NENTVW
Trigger: CCAGACTGTATTCTCATTCAACCATGACCGTGCGCA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ACCTCCTCCATTCTACATTCTCTCTCCGAAGTAGGGTGTGTGTGTGTGTGTGTGGTTCATTCAAGTGCATaGAATGCCTATGTGGATAGA +
Preference number: 5 (lower is better)
Translates to: TSSILHSLSEVGCVCVCVVHSSA*NAYVDR
Trigger: TCTATCCACATAGGCATTCAATGCACTTGAATGAAC...CACACACACACACACACACCCTACTTCGGAGAGAGAATGTAGAATGGAGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCTCCTTGCAAAACTCCTaGCCTGGAACACCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFSLQNS*PGTPLR
Trigger: CCTCAAAGGTGTTCCAGGCAAGGAGTTTTGCAAGGA...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGGGGTCTTATACTCATTaGACAGATGAGGAATCAGAG +
Preference number: 5 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRGSYTH*TDEESE
Trigger: CTCTGATTCCTCATCTGTCAAATGAGTATAAGACCC...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGTTCTGTGGTGTGTCTaGGACGCAGGGGTTCGGGCT +
Preference number: 5 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLVLWCV*DAGVRA
Trigger: AGCCCGAACCCCTGCGTCCAAGACACACCACAGAAC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS GCA 90 bp AATATGCAACTTCAGCTGTTTGGAAGTCTCTGGAATGGTTGTTATTaGTTGTGGGCCAGAGGTCTATATGGCTTCCAACCATGGTCATGT +
Preference number: 5 (lower is better)
Translates to: NMQLQLFGSLWNGCY*LWARGLYGFQPWSC
Trigger: ACATGACCATGGTTGGAAGCCATATAGACCTCTGGCCCACAAGCAATAACAACCATTCCAGAGACTTCCAAACAGCTGAAGTTGCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATGAGATCCTGGGCATTTaGGGATGCAGTGTGGTCCAT +
Preference number: 5 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHEILGI*GCSVVH
Trigger: ATGGACCACACTGCATCCCAAAATGCCCAGGATCTC...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GGAGAAGTGGAGTTGCAATATCTGGACTCAGTGGCACAGACTGAACCCATGAAAGCAAGCCAGATATTATaGATTCTGTGGAAAGAGATC +
Preference number: 5 (lower is better)
Translates to: GEVELQYLDSVAQTEPMKASQIL*ILWKEI
Trigger: GATCTCTTTCCACAGAATCAATAATATCTGGCTTGC...TTTCATGGGTTCAGTCTGTGCCACTGAGTCCAGATATTGCAACTCCACTTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp CAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAACACGGAATGTCGAGTaGTGGGTGAGTAATATGCAA +
Preference number: 5 (lower is better)
Translates to: QLFQRSAALVELVQEIASTRNVE*WVSNMQ
Trigger: TTGCATATTACTCACCCACAACTCGACATTCCGTGT...TGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp AGGAATCTCCAAGATGAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGTGGTATGTCCTGTTCTaGCATACATGTAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: RNLQDEQLFQRSAALVELWYVLF*HTCRLV
Trigger: CACCAACCTACATGTATGCAAGAACAGGACATACCA...CAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTCATCTTGGAGATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAGTGTCCATGTTTCCTaGCATGGCTGTATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTSVHVS*HGCMCA
Trigger: AGCACACATACAGCCATGCAAGGAAACATGGACACT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGATTGTCAAGTTGCTTTaGGTATTCAGGACTTTCCTC +
Preference number: 5 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRIVKLL*VFRTFL
Trigger: GAGGAAAGTCCTGAATACCAAAAGCAACTTGACAAT...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGCAGTTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGCCCAATAGTCTCTGGTaGTTTCTGATATGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: EQLFQRSAALVELVQEIAPNSLW*FLICQG
Trigger: ACCTTGACATATCAGAAACAACCAGAGACTATTGGG...CGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAACTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTCGGCCATTCTGGTCTaGCTGCCGATGTCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQSAILV*LPMSEV
Trigger: CACCTCAGACATCGGCAGCAAGACCAGAATGGCCGA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGAGGTCTCCGTTTCCTaGATGGTACTCTTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFEVSVS*MVLFLE
Trigger: TTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS TCA 90 bp TCGGCAGCTGAAGTTAAACCATTGGGAGGAGCTGTTGGAGCTAAATaGGTTTCCCAACTTGTGGTGCTAATTGTGTGTCCATTTAAATCA +
Preference number: 5 (lower is better)
Translates to: SAAEVKPLGGAVGAK*VSQLVVLIVCPFKS
Trigger: TGATTTAAATGGACACACAATTAGCACCACAAGTTGGGAAACTCATTTAGCTCCAACAGCTCCTCCCAATGGTTTAACTTCAGCTGCCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS GCA 90 bp CTGGAAATTTCAGAACCTGTATCTGTTCCATCTGAAAGCATTTCCTaGAAGCTACCTGTAGAAGTTGGTCCTGGTGAGGTTAGCAAAAGA +
Preference number: 5 (lower is better)
Translates to: LEISEPVSVPSESIS*KLPVEVGPGEVSKR
Trigger: TCTTTTGCTAACCTCACCAGGACCAACTTCTACAGGTAGCTTGCAGGAAATGCTTTCAGATGGAACAGATACAGGTTCTGAAATTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATCGGAATGCCATTTTGTaGAGGATCCAGAAACACCTA +
Preference number: 5 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDRNAIL*RIQKHL
Trigger: TAGGTGTTTCTGGATCCTCAACAAAATGGCATTCCG...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATAAGGATGGCTTGCTCTaGACCCAGTGTGGTGATATG +
Preference number: 5 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHKDGLL*TQCGDM
Trigger: CATATCACCACACTGGGTCAAGAGCAAGCCATCCTT...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATACACGGAATGTCGAGTaGTGGGTGAGTAATATGCAA +
Preference number: 5 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDTRNVE*WVSNMQ
Trigger: TTGCATATTACTCACCCACAACTCGACATTCCGTGT...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATTGGTATGTCCTGTTCTaGCATACATGTAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDWYVLF*HTCRLV
Trigger: CACCAACCTACATGTATGCAAGAACAGGACATACCA...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGAGGTCTGCAGTGACGTaGCTGACTCCATACACACCC +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQRSAVT*LTPYTP
Trigger: GGGTGTGTATGGAGTCAGCAACGTCACTGCAGACCT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCAGCCTTGCACAGGCTTaGCTCTCTGCGGCAGGTTTA +
Preference number: 5 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLSLAQA*LSAAGL
Trigger: TAAACCTGCCGCAGAGAGCAAAGCCTGTGCAAGGCT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp ATGGAGGGTGAGAAAGACTCACCCATTGCTATGTCTCAAGTCCTAACACGTAGGACTGTCCACAGTGTTTaGCAAACTGATTTAGGTTTT +
Preference number: 5 (lower is better)
Translates to: MEGEKDSPIAMSQVLTRRTVHSV*QTDLGF
Trigger: AAAACCTAAATCAGTTTGCAAAACACTGTGGACAGT...CCTACGTGTTAGGACTTGAGACATAGCAATGGGTGAGTCTTTCTCACCCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTGCCTGTTGGGATCCTaGGTGCTGAGACAGGAATGC +
Preference number: 5 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLCLLGS*VLRQEC
Trigger: GCATTCCTGTCTCAGCACCAAGGATCCCAACAGGCA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAAATCTTTTCTCAGTTaGTGTGTGAGATGGGGGCGT +
Preference number: 5 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFKSFLS*CVRWGR
Trigger: ACGCCCCCATCTCACACACAAACTGAGAAAAGATTT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAGAAAACATCTGTGGTaGCTGGCTTTTTCATGTCTC +
Preference number: 5 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFRKHLW*LAFSCL
Trigger: GAGACATGAAAAAGCCAGCAACCACAGATGTTTTCT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAGAAAACATCTGTGGTaGCTGGCTTTTTCATGTCTC +
Preference number: 5 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTRKHLW*LAFSCL
Trigger: GAGACATGAAAAAGCCAGCAACCACAGATGTTTTCT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCCAGGCTGCTCAATGCTaGTACCGAGGACTAGATCCT +
Preference number: 5 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLQAAQC*YRGLDP
Trigger: AGGATCTAGTCCTCGGTACAAGCATTGAGCAGCCTG...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAATGGTTGTTATTGCTaGTGGGCCAGAGGTCTATAT +
Preference number: 5 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTNGCYC*WARGLY
Trigger: ATATAGACCTCTGGCCCACAAGCAATAACAACCATT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCAGGTTGGATGCCATTTaGCCAGTCGTGACCACTGCA +
Preference number: 5 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLRLDAI*PVVTTA
Trigger: TGCAGTGGTCACGACTGGCAAAATGGCATCCAACCT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGCAGCCTCTGTTCCATaGTCTGAGCAAACTTGCAGG +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQAASVP*SEQTCR
Trigger: CCTGCAAGTTTGCTCAGACAATGGAACAGAGGCTGC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTCCTTGCCTCCTCCTTaGTCACTTTCTGCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQSLPPP*SLSAVP
Trigger: TGGCACAGCAGAAAGTGACAAAGGAGGAGGCAAGGA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCAAGTACTATTTCCTTTaGTACCACTCAGCAGCACAC +
Preference number: 5 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFKYYFL*YHSAAH
Trigger: GTGTGCTGCTGAGTGGTACAAAAGGAAATAGTACTT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGCCAGGGAGGGCAACTaGCAACATCATGGTCACAAA +
Preference number: 5 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLAREGN*QHHGHK
Trigger: TTTGTGACCATGATGTTGCAAGTTGCCCTCCCTGGC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATATCCGAACAAGAGACTaGTTTGAAGGTTCCATGACA +
Preference number: 5 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDIRTRD*FEGSMT
Trigger: TGTCATGGAACCTTCAAACAAGTCTCTTGTTCGGAT...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGTGTGGAGTGGGTTCTaGAGGGGTGGATTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQVWSGF*RGGFFS
Trigger: GCTGAAAAATCCACCCCTCAAGAACCCACTCCACAC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATGTAGTAGGTTCTTTTaGAAGGTCTTGCCCACTCAT +
Preference number: 5 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTCSRFF*KVLPTH
Trigger: ATGAGTGGGCAAGACCTTCAAAAAGAACCTACTACA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACATCACTGAAGTATGGTTaGACCAATGGAGACAGATTC +
Preference number: 5 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTSLKYG*TNGDRF
Trigger: GAATCTGTCTCCATTGGTCAAACCATACTTCAGTGA...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCGCCTCTCTCCATAATTaGCAAAAGTCTGACCAAAGT +
Preference number: 5 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFASLHN*QKSDQS
Trigger: ACTTTGGTCAGACTTTTGCAAATTATGGAGAGAGGC...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGAAGGATGGCTTGCTCTaGACCCAGTGTGGTGATATG +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQKDGLL*TQCGDM
Trigger: CATATCACCACACTGGGTCAAGAGCAAGCCATCCTT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTAGAAGATTAGGAACTTaGCTTGAGAGGAGCAAGTCT +
Preference number: 5 (lower is better)
Translates to: LFQRSAALVELVQEIASIRRLGT*LERSKS
Trigger: AGACTTGCTCCTCTCAAGCAAAGTTCCTAATCTTCT...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp TTATTTCAGAGATCTGCTGCCTTAGTGGAACTGGTGCAAGAAATTGCGTCAATTAATGGTTGTTATTGCTaGTGGGCCAGAGGTCTATAT +
Preference number: 5 (lower is better)
Translates to: LFQRSAALVELVQEIASINGCYC*WARGLY
Trigger: ATATAGACCTCTGGCCCACAAGCAATAACAACCATT...AATTGACGCAATTTCTTGCACCAGTTCCACTAAGGCAGCAGATCTCTGAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGGGCCAGATGCGGCCTaGTTTGTGACATTTTTAGCA +
Preference number: 5 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLGPDAA*FVTFLA
Trigger: TGCTAAAAATGTCACAAACAAGGCCGCATCTGGCCC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GAGGTCTCCGTTTCCTTGATGGTACTCTTTCTGGAAAAAGCCAAAATGCATTTCATTGTCAAGTTGCTTTaGGTATTCAGGACTTTCCTC +
Preference number: 5 (lower is better)
Translates to: EVSVSLMVLFLEKAKMHFIVKLL*VFRTFL
Trigger: GAGGAAAGTCCTGAATACCAAAAGCAACTTGACAAT...GAAATGCATTTTGGCTTTTTCCAGAAAGAGTACCATCAAGGAAACGGAGACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCCTGGTTTCAGTGGATTaGGCGGTCTTGATGGTGCTT +
Preference number: 5 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLLVSVD*AVLMVL
Trigger: AAGCACCATCAAGACCGCCAAATCCACTGAAACCAG...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGGAACTCTGTCAATGTaGGTTTCCTCTATGATTTCA +
Preference number: 5 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTGTLSM*VSSMIS
Trigger: TGAAATCATAGAGGAAACCAACATTGACAGAGTTCC...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAGATGGAACTCTGTCAATGTaGGTTTCCTCTATGATTTCA +
Preference number: 5 (lower is better)
Translates to: APQNHHGKYRGSYTHLTDGTLSM*VSSMIS
Trigger: TGAAATCATAGAGGAAACCAACATTGACAGAGTTCC...ATCTGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCAAGTCTCTGGAATGGTaGTTATTGCTTGTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLKSLEW*LLLVGQ
Trigger: CTGGCCCACAAGCAATAACAACCATTCCAGAGACTT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGGCACATTTCTCTTCCTaGCCTCCTCCTTTGTCACTT +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQAHFSS*PPPLSL
Trigger: AAGTGACAAAGGAGGAGGCAAGGAAGAGAAATGTGC...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp TGTGCTCCTCAAAATCACCATGGGAAGTACAGAGGGTCTTATACTCATTTGACAAAGGGCAGTTTGCCATaGGAAAATATAAACAACTTC +
Preference number: 5 (lower is better)
Translates to: CAPQNHHGKYRGSYTHLTKGSLP*ENINNF
Trigger: GAAGTTGTTTATATTTTCCAATGGCAAACTGCCCTT...TGTCAAATGAGTATAAGACCCTCTGTACTTCCCATGGTGATTTTGAGGAGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTGTGCTAACTGGGCCTaGTTCAGAAATCGCTTCCTA +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQCANWA*FRNRFL
Trigger: TAGGAAGCGATTTCTGAACAAGGCCCAGTTAGCACA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTTAAAGACTCACCGGTaGGGGTTTTTCACCCAGAGT +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQLKTHR*GFFTQS
Trigger: ACTCTGGGTGAAAAACCCCAACCGGTGAGTCTTTAA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCGCTATGTCCGCTTCCTaGGTAAAGGGAAGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLAMSAS*VKGRRE
Trigger: TTCTCTTCTTCCCTTTACCAAGGAAGCGGACATAGC...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTGGTATGTCCTGTTCTaGCATACATGTAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQWYVLF*HTCRLV
Trigger: CACCAACCTACATGTATGCAAGAACAGGACATACCA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CTAAGCAAACATCAGTTCATTCCGCAAAAGGTTTTTCCTAAGGAACTACACCATATTGTCAAGTTGCTTTaGGTATTCAGGACTTTCCTC +
Preference number: 5 (lower is better)
Translates to: LSKHQFIPQKVFPKELHHIVKLL*VFRTFL
Trigger: GAGGAAAGTCCTGAATACCAAAAGCAACTTGACAAT...ATGGTGTAGTTCCTTAGGAAAAACCTTTTGCGGAATGAACTGATGTTTGCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGATCCACACTCCTGCATaGCCTTTAACACAGAAACAG +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQIHTPA*PLTQKQ
Trigger: CTGTTTCTGTGTTAAAGGCAATGCAGGAGTGTGGAT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGAATGGTTGTTATTGCTaGTGGGCCAGAGGTCTATAT +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQNGCYC*WARGLY
Trigger: ATATAGACCTCTGGCCCACAAGCAATAACAACCATT...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGTCTGATATGTCAAGGTaGGGATATTCCAGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQSDMSR*GYSSGS
Trigger: TGAACCACTGGAATATCCCAACCTTGACATATCAGA...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCCCCAATAGTCTCTGGTaGTTTCTGATATGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLPNSLW*FLICQG
Trigger: ACCTTGACATATCAGAAACAACCAGAGACTATTGGG...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCAAGTACTATTTCCTTTaGTACCACTCAGCAGCACAC +
Preference number: 5 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLKYYFL*YHSAAH
Trigger: GTGTGCTGCTGAGTGGTACAAAAGGAAATAGTACTT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCATCCGAACAAGAGACTaGTTTGAAGGTTCCATGACA +
Preference number: 5 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLIRTRD*FEGSMT
Trigger: TGTCATGGAACCTTCAAACAAGTCTCTTGTTCGGAT...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTTAATCACAGATCTATTTCCTTTCTTCCATCAAGATTACTCTGTAGTAGGTTCTTTTaGAAGGTCTTGCCCACTCAT +
Preference number: 5 (lower is better)
Translates to: VCVCFNHRSISFLPSRLLCSRFF*KVLPTH
Trigger: ATGAGTGGGCAAGACCTTCAAAAAGAACCTACTACA...GAGTAATCTTGATGGAAGAAAGGAAATAGATCTGTGATTAAAACACACACACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS-3UTR CAA 90 bp CCTAAGAAATCAAGAGGCCTTTCAATTCTCAGGACACTAAGTTATTATATTCAGCTCTCAGGTGATGAATaGATGTCACTGGAAATTTCA +
Preference number: 5 (lower is better)
Translates to: PKKSRGLSILRTLSYYIQLSGDE*MSLEIS
Trigger: TGAAATTTCCAGTGACATCAATTCATCACCTGAGAG...CTGAATATAATAACTTAGTGTCCTGAGAATTGAAAGGCCTCTTGATTTCTTAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp CTGGGCGGTAGGTCGGCACCCACTGCACCCCGGCCCTaGGCCGCGTCATGGTCCCCGGAGCGCTGGTCACCA +
Preference number: 6 (lower is better)
Translates to: LGGRSAPTAPRP*AASWSPERWSP
Trigger: TGGTGACCAGCGCTCCGGGGACCATGACGCGGCCCAGGGCCGGGGTGCAGTGGGTGCCGACCTACCGCCCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp CGCCCCCGCGTCGCGGGCCCAGCTTCCCTTGAGCCCTaGGGCTTGGCCTCCTGCGGAGCCATGGGGACGCTT +
Preference number: 6 (lower is better)
Translates to: RPRVAGPASLEP*GLASCGAMGTL
Trigger: AAGCGTCCCCATGGCTCCGCAGGAGGCCAAGCCTCAGGGCTCAAGGGAAGCTGGGCCCGCGACGCGGGGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526400.6
ENST00000658780.2
CDS GCA 72 bp GCGGAGCCATGGGGACGCTTCACACATCCAGGCCGCTaGCTCGCTCTGCACCGCGCCGGGGAGCCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: AEPWGRFTHPGR*LALHRAGEPSP
Trigger: AGGGCTGGGCTCCCCGGCGCGGTGCAGAGCGAGGCAGCGGCCTGGATGTGTGAAGCGTCCCCATGGCTCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp TCGGCACCCACTGCACCCCGGCCCTGGGCCGCGTCATaGTCCCCGGAGCGCTGGTCACCACCTCCGAATAGG +
Preference number: 6 (lower is better)
Translates to: SAPTAPRPWAAS*SPERWSPPPNR
Trigger: CCTATTCGGAGGTGGTGACCAGCGCTCCGGGGACCATGACGCGGCCCAGGGCCGGGGTGCAGTGGGTGCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS GCA 72 bp GGGCCTCTGGACATCTGCGTGAAGGAGGCGCTGTCGTaGAGCTGGGCCGGCTCGGGCCCTGTAGACTCGGCC +
Preference number: 6 (lower is better)
Translates to: GPLDICVKEALS*SWAGSGPVDSA
Trigger: GGCCGAGTCTACAGGGCCCGAGCCGGCCCAGCTGCACGACAGCGCCTCCTTCACGCAGATGTCCAGAGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp GCTGGTCACCACCTCCGAATAGGGCAGGTGCTGGGCTaGGCCGTAGGCCTCTTGGTGCCGGCTCTGGCCTGC +
Preference number: 6 (lower is better)
Translates to: AGHHLRIGQVLG*AVGLLVPALAC
Trigger: GCAGGCCAGAGCCGGCACCAAGAGGCCTACGGCTCAGCCCAGCACCTGCCCTATTCGGAGGTGGTGACCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS GCA 72 bp CTCTTGGTGCCGGCTCTGGCCTGCGTGGCCCGCGGATaGCAGGCTGAAGGCCTCCTCCAGCAGCATGTGCAT +
Preference number: 6 (lower is better)
Translates to: LLVPALACVARG*QAEGLLQQHVH
Trigger: ATGCACATGCTGCTGGAGGAGGCCTTCAGCCTGGCATCCGCGGGCCACGCAGGCCAGAGCCGGCACCAAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp ACGAGGAAGCCTGGAGGGAGAGCTCTGGGGGTACCGTaGTCGGGGGTAGGCCTCGATGTACCCTGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: TRKPGGRALGVP*SGVGLDVPWEG
Trigger: CCCCTCCCAGGGTACATCGAGGCCTACCCCCGATCACGGTACCCCCAGAGCTCTCCCTCCAGGCTTCCTCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS GCA 72 bp CAGCGCGGCCGTGACTGTCAGTGGGCGTGGCGTGGATaGTCTGGGCATCTCCAGGTTGGTGGGGTTTGGGAG +
Preference number: 6 (lower is better)
Translates to: QRGRDCQWAWRG*SGHLQVGGVWE
Trigger: CTCCCAAACCCCACCAACCTGGAGATGCCCAGAGCATCCACGCCACGCCCACTGACAGTCACGGCCGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 72 bp GATGTTGGTCAGGGGAGCGTCAGACGGGTCGTTTTCTaGCAGGCTCTGCTGCGAGGCCGCTGTGGAGGGCGC +
Preference number: 6 (lower is better)
Translates to: DVGQGSVRRVVF*QALLRGRCGGR
Trigger: GCGCCCTCCACAGCGGCCTCGCAGCAGAGCCTGGCAGAAAACGACCCGTCTGACGCTCCCCTGACCAACATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp CTGGACATCTGCGTGAAGGAGGCGCTGTCGTGCAGCTaGGCCGGCTCGGGCCCTGTAGACTCGGCCATTCTG +
Preference number: 6 (lower is better)
Translates to: LDICVKEALSCS*AGSGPVDSAIL
Trigger: CAGAATGGCCGAGTCTACAGGGCCCGAGCCGGCCCAGCTGCACGACAGCGCCTCCTTCACGCAGATGTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS GCA 72 bp ATCTGTAGATTGTCTGTTCCCGGGTCGGCCTGGCCGTaGTCCAGGAGGGCCGCCAGCAGCAGAAGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: ICRLSVPGSAWP*SRRAASSRSPS
Trigger: GCTGGGACTTCTGCTGCTGGCGGCCCTCCTGGAGCACGGCCAGGCCGACCCGGGAACAGACAATCTACAGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp TGGGCCAGGCGCTGCTCCATGACCCGGGCAAAGCTCTaGTTGTGCAGGCCCACCAGCGAATTGTCCACACCC +
Preference number: 6 (lower is better)
Translates to: WARRCSMTRAKL*LCRPTSELSTP
Trigger: GGGTGTGGACAATTCGCTGGTGGGCCTGCACAACCAGAGCTTTGCCCGGGTCATGGAGCAGCGCCTGGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp GTAAGCCGGCCGGGGCAGACTGTACTGATACATTTCTaGGCGGTAGGTCGGCACCCACTGCACCCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: VSRPGQTVLIHF*AVGRHPLHPGP
Trigger: AGGGCCGGGGTGCAGTGGGTGCCGACCTACCGCCCAGAAATGTATCAGTACAGTCTGCCCCGGCCGGCTTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp GCAGGTTGGCTGGCTGGCTGTACTGACGAGGAAGCCTaGAGGGAGAGCTCTGGGGGTACCGTGATCGGGGGT +
Preference number: 6 (lower is better)
Translates to: AGWLAGCTDEEA*RESSGGTVIGG
Trigger: ACCCCCGATCACGGTACCCCCAGAGCTCTCCCTCCAGGCTTCCTCGTCAGTACAGCCAGCCAGCCAACCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp CCACCTCCTCCCGGATGGCCTTCACAAGGGCCGCAGTaGAGATGTTGGTCAGGGGAGCGTCAGACGGGTCGT +
Preference number: 6 (lower is better)
Translates to: PPPPGWPSQGPQ*RCWSGERQTGR
Trigger: ACGACCCGTCTGACGCTCCCCTGACCAACATCTCCACTGCGGCCCTTGTGAAGGCCATCCGGGAGGAGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CAA 72 bp GCCAGGCGCTGCTCCATGACCCGGGCAAAGCTCTGGTaGTGCAGGCCCACCAGCGAATTGTCCACACCCTGC +
Preference number: 6 (lower is better)
Translates to: ARRCSMTRAKLW*CRPTSELSTPC
Trigger: GCAGGGTGTGGACAATTCGCTGGTGGGCCTGCACAACCAGAGCTTTGCCCGGGTCATGGAGCAGCGCCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 90 bp TGCAGCTGGGCCGGCTCGGGCCCTGTAGACTCGGCCATTCTGGTCTaGCTGCCGATGTCTGAGGTGGATCGCCTGAGAGAAGCGACAGCC +
Preference number: 6 (lower is better)
Translates to: CSWAGSGPVDSAILV*LPMSEVDRLREATA
Trigger: GGCTGTCGCTTCTCTCAGGCGATCCACCTCAGACATCGGCAGCAAGACCAGAATGGCCGAGTCTACAGGGCCCGAGCCGGCCCAGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CAA 90 bp GCCACCTCCTCCCGGATGGCCTTCACAAGGGCCGCAGTGGAGATGTaGGTCAGGGGAGCGTCAGACGGGTCGTTTTCTGCCAGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: ATSSRMAFTRAAVEM*VRGASDGSFSARLC
Trigger: GCAGAGCCTGGCAGAAAACGACCCGTCTGACGCTCCCCTGACCAACATCTCCACTGCGGCCCTTGTGAAGGCCATCCGGGAGGAGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS GCA 72 bp AGGCGCTGCTCCATGACCCGGGCAAAGCTCTGGTTGTaGAGGCCCACCAGCGAATTGTCCACACCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: RRCSMTRAKLWL*RPTSELSTPCS
Trigger: GCTGCAGGGTGTGGACAATTCGCTGGTGGGCCTGCACAACCAGAGCTTTGCCCGGGTCATGGAGCAGCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 72 bp CCCAGGGTGGTGGCCCGTTTAAACCGCCGGCCTTGTTaGTGGGACATCATGAATAGCTGGGCCAGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: PRVVARLNRRPC*WDIMNSWARRC
Trigger: GCAGCGCCTGGCCCAGCTATTCATGATGTCCCAGCAACAAGGCCGGCGGTTTAAACGGGCCACCACCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 72 bp GCCAGGCTGAAGGCCTCCTCCAGCAGCATGTGCATCTaGTGCCTGACCTCGTCGATGGATGGCTGGGAGCTC +
Preference number: 6 (lower is better)
Translates to: ARLKASSSSMCI*CLTSSMDGWEL
Trigger: GAGCTCCCAGCCATCCATCGACGAGGTCAGGCAGCAGATGCACATGCTGCTGGAGGAGGCCTTCAGCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp AATGGATGTCAGCGCGGCCGTGACTGTCAGTGGGCGTaGCGTGGATGCTCTGGGCATCTCCAGGTTGGTGGG +
Preference number: 6 (lower is better)
Translates to: NGCQRGRDCQWA*RGCSGHLQVGG
Trigger: CCCACCAACCTGGAGATGCCCAGAGCATCCACGCCACGCCCACTGACAGTCACGGCCGCGCTGACATCCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 72 bp AGTGGGCGTGGCGTGGATGCTCTGGGCATCTCCAGGTaGGTGGGGTTTGGGAGGCCGGTGTGCATGGCTTGT +
Preference number: 6 (lower is better)
Translates to: SGRGVDALGISR*VGFGRPVCMAC
Trigger: ACAAGCCATGCACACCGGCCTCCCAAACCCCACCAACCTGGAGATGCCCAGAGCATCCACGCCACGCCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 90 bp GTGGGCGTGGCGTGGATGCTCTGGGCATCTCCAGGTTGGTGGGGTTaGGGAGGCCGGTGTGCATGGCTTGTGGTTTCCTGGGGAGGTAAG +
Preference number: 6 (lower is better)
Translates to: VGVAWMLWASPGWWG*GGRCAWLVVSWGGK
Trigger: CTTACCTCCCCAGGAAACCACAAGCCATGCACACCGGCCTCCCAAACCCCACCAACCTGGAGATGCCCAGAGCATCCACGCCACGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 90 bp GTGACTGTCAGTGGGCGTGGCGTGGATGCTCTGGGCATCTCCAGGTaGGTGGGGTTTGGGAGGCCGGTGTGCATGGCTTGTGGTTTCCTG +
Preference number: 6 (lower is better)
Translates to: VTVSGRGVDALGISR*VGFGRPVCMACGFL
Trigger: CAGGAAACCACAAGCCATGCACACCGGCCTCCCAAACCCCACCAACCTGGAGATGCCCAGAGCATCCACGCCACGCCCACTGACAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp GGCTGTAATGGATGTCAGCGCGGCCGTGACTGTCAGTaGGCGTGGCGTGGATGCTCTGGGCATCTCCAGGTT +
Preference number: 6 (lower is better)
Translates to: GCNGCQRGRDCQ*AWRGCSGHLQV
Trigger: AACCTGGAGATGCCCAGAGCATCCACGCCACGCCCACTGACAGTCACGGCCGCGCTGACATCCATTACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp AACCGCCGGCCTTGTTGCTGGGACATCATGAATAGCTaGGCCAGGCGCTGCTCCATGACCCGGGCAAAGCTC +
Preference number: 6 (lower is better)
Translates to: NRRPCCWDIMNS*ARRCSMTRAKL
Trigger: GAGCTTTGCCCGGGTCATGGAGCAGCGCCTGGCCCAGCTATTCATGATGTCCCAGCAACAAGGCCGGCGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp AGGGTGGTGGCCCGTTTAAACCGCCGGCCTTGTTGCTaGGACATCATGAATAGCTGGGCCAGGCGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: RVVARLNRRPCC*DIMNSWARRCS
Trigger: GGAGCAGCGCCTGGCCCAGCTATTCATGATGTCCCAGCAACAAGGCCGGCGGTTTAAACGGGCCACCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp CAGCATGTGCATCTGCTGCCTGACCTCGTCGATGGATaGCTGGGAGCTCAGTGTGGAGGTCTCCGAGTGGCC +
Preference number: 6 (lower is better)
Translates to: QHVHLLPDLVDG*LGAQCGGLRVA
Trigger: GGCCACTCGGAGACCTCCACACTGAGCTCCCAGCCATCCATCGACGAGGTCAGGCAGCAGATGCACATGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp CCCGGATGGCCTTCACAAGGGCCGCAGTGGAGATGTTaGTCAGGGGAGCGTCAGACGGGTCGTTTTCTGCCA +
Preference number: 6 (lower is better)
Translates to: PGWPSQGPQWRC*SGERQTGRFLP
Trigger: TGGCAGAAAACGACCCGTCTGACGCTCCCCTGACCAACATCTCCACTGCGGCCCTTGTGAAGGCCATCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CAA 72 bp GCGTGGATGCTCTGGGCATCTCCAGGTTGGTGGGGTTaGGGAGGCCGGTGTGCATGGCTTGTGGTTTCCTGG +
Preference number: 6 (lower is better)
Translates to: AWMLWASPGWWG*GGRCAWLVVSW
Trigger: CCAGGAAACCACAAGCCATGCACACCGGCCTCCCAAACCCCACCAACCTGGAGATGCCCAGAGCATCCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 72 bp GCCGGCTCGGGCCCTGTAGACTCGGCCATTCTGGTCTaGCTGCCGATGTCTGAGGTGGATCGCCTGAGAGAA +
Preference number: 6 (lower is better)
Translates to: AGSGPVDSAILV*LPMSEVDRLRE
Trigger: TTCTCTCAGGCGATCCACCTCAGACATCGGCAGCAAGACCAGAATGGCCGAGTCTACAGGGCCCGAGCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CAA 72 bp TCCCGGATGGCCTTCACAAGGGCCGCAGTGGAGATGTaGGTCAGGGGAGCGTCAGACGGGTCGTTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: SRMAFTRAAVEM*VRGASDGSFSA
Trigger: GGCAGAAAACGACCCGTCTGACGCTCCCCTGACCAACATCTCCACTGCGGCCCTTGTGAAGGCCATCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CAA 90 bp AATAGCTGGGCCAGGCGCTGCTCCATGACCCGGGCAAAGCTCTGGTaGTGCAGGCCCACCAGCGAATTGTCCACACCCTGCAGCACTGTA +
Preference number: 6 (lower is better)
Translates to: NSWARRCSMTRAKLW*CRPTSELSTPCSTV
Trigger: TACAGTGCTGCAGGGTGTGGACAATTCGCTGGTGGGCCTGCACAACCAGAGCTTTGCCCGGGTCATGGAGCAGCGCCTGGCCCAGCTATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp AGGCTGCTGGCGACGGTGCCGTTGAGGAATGTGCTCTaGTTGCCCACGACGTACACCAAGGTGACTGCCTGG +
Preference number: 6 (lower is better)
Translates to: RLLATVPLRNVL*LPTTYTKVTAW
Trigger: CCAGGCAGTCACCTTGGTGTACGTCGTGGGCAATCAGAGCACATTCCTCAACGGCACCGTCGCCAGCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 90 bp GGGCATCTCCAGGTTGGTGGGGTTTGGGAGGCCGGTGTGCATGGCTaGTGGTTTCCTGGGGAGGTAAGTTGTAGACAACAGGCCAGAGGC +
Preference number: 6 (lower is better)
Translates to: GHLQVGGVWEAGVHG*WFPGEVSCRQQARG
Trigger: GCCTCTGGCCTGTTGTCTACAACTTACCTCCCCAGGAAACCACAAGCCATGCACACCGGCCTCCCAAACCCCACCAACCTGGAGATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp GCATTAGTGGCTGCACCTGTCCATTTCTTGGGGTGCTaGGAAGCCCGCAGCACTCTGGAGGAGGTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: ALVAAPVHFLGC*EARSTLEEVLG
Trigger: TCCCAGGACCTCCTCCAGAGTGCTGCGGGCTTCTCAGCACCCCAAGAAATGGACAGGTGCAGCCACTAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS TCA 72 bp TTCTGCTCGCAATGGTGGCAACCGGGTGGCCTTCACTaGGGCTGTAATGGATGTCAGCGCGGCCGTGACTGT +
Preference number: 6 (lower is better)
Translates to: FCSQWWQPGGLH*GCNGCQRGRDC
Trigger: ACAGTCACGGCCGCGCTGACATCCATTACAGCCTCAGTGAAGGCCACCCGGTTGCCACCATTGCGAGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp GGACAACGAGGGGAGCATGCTGGTGAGAGGCAAACCTaGCACATCGGCTGCTTCTTGTCCCCCTTTAGGCCC +
Preference number: 6 (lower is better)
Translates to: GQRGEHAGERQT*HIGCFLSPFRP
Trigger: GGGCCTAAAGGGGGACAAGAAGCAGCCGATGTGTCAGGTTTGCCTCTCACCAGCATGCTCCCCTCGTTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS CCA 72 bp CTCCCGAGTCACCAGAAGGTCCATCTCGGTTTCCCCTaGACTCGGGCTGTTCAGAGACTGCCGGCTTCTGTA +
Preference number: 6 (lower is better)
Translates to: LPSHQKVHLGFP*TRAVQRLPASV
Trigger: TACAGAAGCCGGCAGTCTCTGAACAGCCCGAGTCCAGGGGAAACCGAGATGGACCTTCTGGTGACTCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp ATGTGCATCTGCTGCCTGACCTCGTCGATGGATGGCTaGGAGCTCAGTGTGGAGGTCTCCGAGTGGCCTTTC +
Preference number: 6 (lower is better)
Translates to: MCICCLTSSMDG*ELSVEVSEWPF
Trigger: GAAAGGCCACTCGGAGACCTCCACACTGAGCTCCCAGCCATCCATCGACGAGGTCAGGCAGCAGATGCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CAA 72 bp TTAGGCCCCGGTTGGACCAGGGACTCGGTAGAATCCTaGGAAGGTTCGAGGGAGGCGCTATGTCCGCTTCCT +
Preference number: 6 (lower is better)
Translates to: LGPGWTRDSVES*EGSREALCPLP
Trigger: AGGAAGCGGACATAGCGCCTCCCTCGAACCTTCCAAGGATTCTACCGAGTCCCTGGTCCAACCGGGGCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526400.6
ENST00000658780.2
CDS CAA 90 bp ACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTaGCTGATGACAGAGCCATTCTCACTGGGCGACCTGCTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: TFWGERLPELGFPDS*LMTEPFSLGDLLFL
Trigger: CAGGAAGAGCAGGTCGCCCAGTGAGAATGGCTCTGTCATCAGCAACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp CATGGAGGAGGGCGATGCTCTCACCTGTTTGGAAGCTaGAGCTGGCAACCCAGAATGGTCCACAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: HGGGRCSHLFGS*SWQPRMVHSSC
Trigger: GCAGCTGCTGTGGACCATTCTGGGTTGCCAGCTTCAGCTTCCAAACAGGTGAGAGCATCGCCCTCCTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp GATGATACTGTGTCCGCTGTCCATTTCTTGGGGTGCTaGGAAGCCCGCAGCACTCTGGAGGAGGTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: DDTVSAVHFLGC*EARSTLEEVLG
Trigger: TCCCAGGACCTCCTCCAGAGTGCTGCGGGCTTCTCAGCACCCCAAGAAATGGACAGCGGACACAGTATCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS GCA 72 bp GATGATGACCGTGACCACGGCAATGGGCGCCAGCACTaGAGCGATGATCCACAGGTTATTGGGCGGGTTCTT +
Preference number: 6 (lower is better)
Translates to: DDDRDHGNGRQH*SDDPQVIGRVL
Trigger: AAGAACCCGCCCAATAACCTGTGGATCATCGCTGCAGTGCTGGCGCCCATTGCCGTGGTCACGGTCATCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp TCTAGTTGCAGGAGGGGACCCATCACTGCCCTCTGCTaGAAGAGTGGGCATTTCTGGCACAGGAGATGGGGA +
Preference number: 6 (lower is better)
Translates to: SSCRRGPITALC*KSGHFWHRRWG
Trigger: TCCCCATCTCCTGTGCCAGAAATGCCCACTCTTCCAGCAGAGGGCAGTGATGGGTCCCCTCCTGCAACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp GTTGGTGGGGTTTGGGAGGCCGGTGTGCATGGCTTGTaGTTTCCTGGGGAGGTAAGTTGTAGACAACAGGCC +
Preference number: 6 (lower is better)
Translates to: VGGVWEAGVHGL*FPGEVSCRQQA
Trigger: GGCCTGTTGTCTACAACTTACCTCCCCAGGAAACCACAAGCCATGCACACCGGCCTCCCAAACCCCACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp CTTCCCGTTGTACAGGGTATAGTAAGTCAGCTCCGCTaGGTCCTTCGGGCCTGGGACACGCTGCATCTTCAC +
Preference number: 6 (lower is better)
Translates to: LPVVQGIVSQLR*VLRAWDTLHLH
Trigger: GTGAAGATGCAGCGTGTCCCAGGCCCGAAGGACCCAGCGGAGCTGACTTACTATACCCTGTACAACGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp TGGAGGTCTCCGAGTGGCCTTTCACCTGTCGAGACCTaGAATAGCCCCGGGGCTCAGGAACTCTGTCAATGT +
Preference number: 6 (lower is better)
Translates to: WRSPSGLSPVET*NSPGAQELCQC
Trigger: ACATTGACAGAGTTCCTGAGCCCCGGGGCTATTCCAGGTCTCGACAGGTGAAAGGCCACTCGGAGACCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS CAA 72 bp CACATCGGCTGCTTCTTGTCCCCCTTTAGGCCCCGGTaGGACCAGGGACTCGGTAGAATCCTTGGAAGGTTC +
Preference number: 6 (lower is better)
Translates to: HIGCFLSPFRPR*DQGLGRILGRF
Trigger: GAACCTTCCAAGGATTCTACCGAGTCCCTGGTCCAACCGGGGCCTAAAGGGGGACAAGAAGCAGCCGATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526400.6
ENST00000658780.2
CDS CAA 72 bp GGAGGAGTGGGGGAATGTCTGACCTTGGGGGATGCTTaGAAATGGAGGAAGTCCCTGCCCATACTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: GGVGECLTLGDA*KWRKSLPILAG
Trigger: CCCAGCCAGTATGGGCAGGGACTTCCTCCATTTCAAAGCATCCCCCAAGGTCAGACATTCCCCCACTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS CAA 90 bp ACATTCTGGGGTGAGCGTCTCCCTGAGCTGGGCTTCCCTGATTCGTaGCTGATGACAGAGCCATTCTCACTGGGCGACCTGCTTTGCTCT +
Preference number: 6 (lower is better)
Translates to: TFWGERLPELGFPDS*LMTEPFSLGDLLCS
Trigger: AGAGCAAAGCAGGTCGCCCAGTGAGAATGGCTCTGTCATCAGCAACGAATCAGGGAAGCCCAGCTCAGGGAGACGCTCACCCCAGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS CAA 90 bp AGTCACAGGGATGACCTCCTCATCTGCCCCTTGCTGGCCCAGGTGTaGCTTGGCATAATCAAAGCCTTGCACAGGCTTTGCTCTCTGCGG +
Preference number: 6 (lower is better)
Translates to: SHRDDLLICPLLAQV*LGIIKALHRLCSLR
Trigger: CCGCAGAGAGCAAAGCCTGTGCAAGGCTTTGATTATGCCAAGCAACACCTGGGCCAGCAAGGGGCAGATGAGGAGGTCATCCCTGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp ATTCCAGTGGTTCAGCAATGGTTAGCGGCGGATAGGTaGGGTAGAATCCCACCAGCTCAGCCGAGAGCTGGC +
Preference number: 6 (lower is better)
Translates to: IPVVQQWLAADR*GRIPPAQPRAG
Trigger: GCCAGCTCTCGGCTGAGCTGGTGGGATTCTACCTCACCTATCCGCCGCTAACCATTGCTGAACCACTGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp TCCTGCATAGGACATCCAGGCCTGGTTCCTATAGGATaGGGGAGGCGTTGGGATGAAGTAGCCGGTGAAGCC +
Preference number: 6 (lower is better)
Translates to: SCIGHPGLVPIG*GRRWDEVAGEA
Trigger: GGCTTCACCGGCTACTTCATCCCAACGCCTCCCTCATCCTATAGGAACCAGGCCTGGATGTCCTATGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp CTGATGGGACTGTGGACAACGAGGGGAGCATGCTGGTaGGAGGCAAACCTGACACATCGGCTGCTTCTTGTC +
Preference number: 6 (lower is better)
Translates to: LMGLWTTRGACW*EANLTHRLLLV
Trigger: GACAAGAAGCAGCCGATGTGTCAGGTTTGCCTCTCACCAGCATGCTCCCCTCGTTGTCCACAGTCCCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS GCA 72 bp GCGGGCCCTCTGGAATTCTCTGGAGCTGCTGACAAATaGAGCGGGTTAGCAGAGTCATTTGCAGTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: AGPLEFSGAADK*SGLAESFAVAE
Trigger: CTCTGCCACTGCAAATGACTCTGCTAACCCGCTGCATTTGTCAGCAGCTCCAGAGAATTCCAGAGGGCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS GCA 72 bp CATGTAGGTTGGTGTGAATGGGAAGGCTGTATGGACTaGCCCTGGTGTCCTCTTTGGGCCAGATGCGGCCTT +
Preference number: 6 (lower is better)
Translates to: HVGWCEWEGCMD*PWCPLWARCGL
Trigger: AAGGCCGCATCTGGCCCAAAGAGGACACCAGGGGCAGTCCATACAGCCTTCCCATTCACACCAACCTACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 72 bp CACTGTCTCCTGAGTCACAGGGATGACCTCCTCATCTaGCCCTTGCTGGCCCAGGTGTTGCTTGGCATAATC +
Preference number: 6 (lower is better)
Translates to: HCLLSHRDDLLI*PLLAQVLLGII
Trigger: GATTATGCCAAGCAACACCTGGGCCAGCAAGGGGCAGATGAGGAGGTCATCCCTGTGACTCAGGAGACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 72 bp AGAGGGAGGAGTGGGGGAATGTCTGACCTTGGGGGATaGTTTGAAATGGAGGAAGTCCCTGCCCATACTGGC +
Preference number: 6 (lower is better)
Translates to: RGRSGGMSDLGG*FEMEEVPAHTG
Trigger: GCCAGTATGGGCAGGGACTTCCTCCATTTCAAAGCATCCCCCAAGGTCAGACATTCCCCCACTCCTCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS CCA 72 bp AAGAAGAGGTGTGTTCTGCCGAAAGGGCGGGCCCTCTaGAATTCTCTGGAGCTGCTGACAAATGCAGCGGGT +
Preference number: 6 (lower is better)
Translates to: KKRCVLPKGRAL*NSLELLTNAAG
Trigger: ACCCGCTGCATTTGTCAGCAGCTCCAGAGAATTCCAGAGGGCCCGCCCTTTCGGCAGAACACACCTCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CAA 72 bp CAGGTTGGTGGGGTTTGGGAGGCCGGTGTGCATGGCTaGTGGTTTCCTGGGGAGGTAAGTTGTAGACAACAG +
Preference number: 6 (lower is better)
Translates to: QVGGVWEAGVHG*WFPGEVSCRQQ
Trigger: CTGTTGTCTACAACTTACCTCCCCAGGAAACCACAAGCCATGCACACCGGCCTCCCAAACCCCACCAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 72 bp CTCCTGAGTCACAGGGATGACCTCCTCATCTGCCCCTaGCTGGCCCAGGTGTTGCTTGGCATAATCAAAGCC +
Preference number: 6 (lower is better)
Translates to: LLSHRDDLLICP*LAQVLLGIIKA
Trigger: GGCTTTGATTATGCCAAGCAACACCTGGGCCAGCAAGGGGCAGATGAGGAGGTCATCCCTGTGACTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 72 bp ATGGAGGTAGAGGGAGGAGTGGGGGAATGTCTGACCTaGGGGGATGCTTTGAAATGGAGGAAGTCCCTGCCC +
Preference number: 6 (lower is better)
Translates to: MEVEGGVGECLT*GDALKWRKSLP
Trigger: GGGCAGGGACTTCCTCCATTTCAAAGCATCCCCCAAGGTCAGACATTCCCCCACTCCTCCCTCTACCTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS CAA 90 bp AACCACTGTCTCCTGAGTCACAGGGATGACCTCCTCATCTGCCCCTaGCTGGCCCAGGTGTTGCTTGGCATAATCAAAGCCTTGCACAGG +
Preference number: 6 (lower is better)
Translates to: NHCLLSHRDDLLICP*LAQVLLGIIKALHR
Trigger: CCTGTGCAAGGCTTTGATTATGCCAAGCAACACCTGGGCCAGCAAGGGGCAGATGAGGAGGTCATCCCTGTGACTCAGGAGACAGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 90 bp GACCCAGAAGATGTGTCAAAGGGTTCAGCGGCCACCTTGCTGGAGTaGTCAAATAGAACCGCTCCCTCCTCTTCGTCACTCGCTGGCACA +
Preference number: 6 (lower is better)
Translates to: DPEDVSKGSAATLLE*SNRTAPSSSSLAGT
Trigger: TGTGCCAGCGAGTGACGAAGAGGAGGGAGCGGTTCTATTTGACAACTCCAGCAAGGTGGCCGCTGAACCCTTTGACACATCTTCTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp CGAAAGGGCGGGCCCTCTGGAATTCTCTGGAGCTGCTaGCAAATGCAGCGGGTTAGCAGAGTCATTTGCAGT +
Preference number: 6 (lower is better)
Translates to: RKGGPSGILWSC*QMQRVSRVICS
Trigger: ACTGCAAATGACTCTGCTAACCCGCTGCATTTGTCAGCAGCTCCAGAGAATTCCAGAGGGCCCGCCCTTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp GATGCGGGAACCGCCCCAGAAAGGATGGCTTGCTCTTaGCCCAGTGTGGTGATATGCAGAGAAGGCACCAAA +
Preference number: 6 (lower is better)
Translates to: DAGTAPERMACS*PSVVICREGTK
Trigger: TTTGGTGCCTTCTCTGCATATCACCACACTGGGTCAAGAGCAAGCCATCCTTTCTGGGGCGGTTCCCGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp TCTGACACTCCAGGTTGGATGCCATTTTGCCAGTCGTaGCCACTGCAGCCGATGCAGCAGGAAGGACAGCAT +
Preference number: 6 (lower is better)
Translates to: SDTPGWMPFCQS*PLQPMQQEGQH
Trigger: ATGCTGTCCTTCCTGCTGCATCGGCTGCAGTGGTCACGACTGGCAAAATGGCATCCAACCTGGAGTGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp GGAATGTGCTCTGATTGCCCACGACGTACACCAAGGTaGCTGCCTGGGAGGCATTGGACGTGCTCACAATCT +
Preference number: 6 (lower is better)
Translates to: GMCSDCPRRTPR*LPGRHWTCSQS
Trigger: AGATTGTGAGCACGTCCAATGCCTCCCAGGCAGTCACCTTGGTGTACGTCGTGGGCAATCAGAGCACATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 72 bp GATATGCAGAGAAGGCACCAAAGAAGAGGTGTGTTCTaGCGAAAGGGCGGGCCCTCTGGAATTCTCTGGAGC +
Preference number: 6 (lower is better)
Translates to: DMQRRHQRRGVF*RKGGPSGILWS
Trigger: GCTCCAGAGAATTCCAGAGGGCCCGCCCTTTCGGCAGAACACACCTCTTCTTTGGTGCCTTCTCTGCATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS GCA 72 bp CAGGAGCTTACTGGACATCTGACACTCCAGGTTGGATaGCATTTTGCCAGTCGTGACCACTGCAGCCGATGC +
Preference number: 6 (lower is better)
Translates to: QELTGHLTLQVG*HFASRDHCSRC
Trigger: GCATCGGCTGCAGTGGTCACGACTGGCAAAATGGCATCCAACCTGGAGTGTCAGATGTCCAGTAAGCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 72 bp CCTTTGGGAATCAATGGTGCTCAGGATCTTGGCAGCTaGGGTCCCCAACAAAGGCTTCCCGTTGTACAGGGT +
Preference number: 6 (lower is better)
Translates to: PLGINGAQDLGS*GPQQRLPVVQG
Trigger: ACCCTGTACAACGGGAAGCCTTTGTTGGGGACCGCAGCTGCCAAGATCCTGAGCACCATTGATTCCCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp CTCTGCTGGAAGAGTGGGCATTTCTGGCACAGGAGATaGGGAGGCATGATTCTCTGTGGGCTGGAGGAAAGT +
Preference number: 6 (lower is better)
Translates to: LCWKSGHFWHRR*GGMILCGLEES
Trigger: ACTTTCCTCCAGCCCACAGAGAATCATGCCTCCCCATCTCCTGTGCCAGAAATGCCCACTCTTCCAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp CGTGATGAAGGGTCAAGGCCATCCTTTGGGAATCAATaGTGCTCAGGATCTTGGCAGCTGCGGTCCCCAACA +
Preference number: 6 (lower is better)
Translates to: RDEGSRPSFGNQ*CSGSWQLRSPT
Trigger: TGTTGGGGACCGCAGCTGCCAAGATCCTGAGCACCATTGATTCCCAAAGGATGGCCTTGACCCTTCATCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp CCTCCTCATCTGCCCCTTGCTGGCCCAGGTGTTGCTTaGCATAATCAAAGCCTTGCACAGGCTTTGCTCTCT +
Preference number: 6 (lower is better)
Translates to: PPHLPLAGPGVA*HNQSLAQALLS
Trigger: AGAGAGCAAAGCCTGTGCAAGGCTTTGATTATGCCAAGCAACACCTGGGCCAGCAAGGGGCAGATGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 72 bp GGGTCGGCTGGAGCTGTTTGGGGAACTAACAGCACTTaGGGGGATTGCTCTGCTGGCTCAGAGATGATGGAA +
Preference number: 6 (lower is better)
Translates to: GSAGAVWGTNST*GDCSAGSEMME
Trigger: TTCCATCATCTCTGAGCCAGCAGAGCAATCCCCCAAAGTGCTGTTAGTTCCCCAAACAGCTCCAGCCGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CAA 90 bp GTCAGCTTGCAGAAGGACAACGTGATGAAGGGTCAAGGCCATCCTTaGGGAATCAATGGTGCTCAGGATCTTGGCAGCTGCGGTCCCCAA +
Preference number: 6 (lower is better)
Translates to: VSLQKDNVMKGQGHP*GINGAQDLGSCGPQ
Trigger: TTGGGGACCGCAGCTGCCAAGATCCTGAGCACCATTGATTCCCAAAGGATGGCCTTGACCCTTCATCACGTTGTCCTTCTGCAAGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 90 bp AGCTGCACAGACCCAGAAGATGTGTCAAAGGGTTCAGCGGCCACCTaGCTGGAGTTGTCAAATAGAACCGCTCCCTCCTCTTCGTCACTC +
Preference number: 6 (lower is better)
Translates to: SCTDPEDVSKGSAAT*LELSNRTAPSSSSL
Trigger: GAGTGACGAAGAGGAGGGAGCGGTTCTATTTGACAACTCCAGCAAGGTGGCCGCTGAACCCTTTGACACATCTTCTGGGTCTGTGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 90 bp GGTAGAATCCTTGGAAGGTTCGAGGGAGGCGCTATGTCCGCTTCCTaGGTAAAGGGAAGAAGAGAAGTCCGCGTGAGCCCTAGTTCTGTG +
Preference number: 6 (lower is better)
Translates to: GRILGRFEGGAMSAS*VKGRREVRVSPSSV
Trigger: CACAGAACTAGGGCTCACGCGGACTTCTCTTCTTCCCTTTACCAAGGAAGCGGACATAGCGCCTCCCTCGAACCTTCCAAGGATTCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp TGTGACGGCAGCTGCTGCTGTTGGCTGTACCTTAGATaGTACTGTGTCCGCTGCATTAGTGGCTGCACCTGT +
Preference number: 6 (lower is better)
Translates to: CDGSCCCWLYLR*YCVRCISGCTC
Trigger: ACAGGTGCAGCCACTAATGCAGCGGACACAGTATCATCTAAGGTACAGCCAACAGCAGCAGCTGCCGTCACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS TCA 72 bp TGTGACGGCAGCTGCTGCTGTTGGCTGTACCTTAGATaGTACTGTGTCCGCTGTCCATTTCTTGGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: CDGSCCCWLYLR*YCVRCPFLGVL
Trigger: CAGCACCCCAAGAAATGGACAGCGGACACAGTATCATCTAAGGTACAGCCAACAGCAGCAGCTGCCGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp GGACTGTCCCAGCACGGTCTTGATTCTGTCTGCTGCTaGGGAAGACCTGACTTCTGTGAAAGGCCATGTTGG +
Preference number: 6 (lower is better)
Translates to: GLSQHGLDSVCC*GRPDFCERPCW
Trigger: CCAACATGGCCTTTCACAGAAGTCAGGTCTTCCTCAGCAGCAGACAGAATCAAGACCGTGCTGGGACAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526400.6
ENST00000658780.2
CDS GCA 72 bp TGTGCTCTGATTGCCCACGACGTACACCAAGGTGACTaGCTGGGAGGCATTGGACGTGCTCACAATCTGAAT +
Preference number: 6 (lower is better)
Translates to: CALIAHDVHQGD*LGGIGRAHNLN
Trigger: ATTCAGATTGTGAGCACGTCCAATGCCTCCCAGGCAGTCACCTTGGTGTACGTCGTGGGCAATCAGAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp CTGCTGGTCATTTCTATGGCCCCTGATTCTGCAGTCTaGAAAAGTGGAGGCTCAGCCTCATGGGTCGCTGTT +
Preference number: 6 (lower is better)
Translates to: LLVISMAPDSAV*KSGGSASWVAV
Trigger: AACAGCGACCCATGAGGCTGAGCCTCCACTTTTCCAGACTGCAGAATCAGGGGCCATAGAAATGACCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp TGGGAAGGCTGTATGGACTGCCCCTGGTGTCCTCTTTaGGCCAGATGCGGCCTTGTTTGTGACATTTTTAGC +
Preference number: 6 (lower is better)
Translates to: WEGCMDCPWCPL*ARCGLVCDIFS
Trigger: GCTAAAAATGTCACAAACAAGGCCGCATCTGGCCCAAAGAGGACACCAGGGGCAGTCCATACAGCCTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 72 bp GGGGACCCTCTGTTGGGGACAGCTCGGAATGCCATTTaGTTGAGGATCCAGAAACACCTAGATGAGGGATGC +
Preference number: 6 (lower is better)
Translates to: GDPLLGTARNAI*LRIQKHLDEGC
Trigger: GCATCCCTCATCTAGGTGTTTCTGGATCCTCAACAAAATGGCATTCCGAGCTGTCCCCAACAGAGGGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CAA 72 bp GCTGGGTGGATGCAGGACCTGAAGCCACTTCCAACATaGACCATGAGGGGCTTCCATCTGGAAGCTGAAGAA +
Preference number: 6 (lower is better)
Translates to: AGWMQDLKPLPT*TMRGFHLEAEE
Trigger: TTCTTCAGCTTCCAGATGGAAGCCCCTCATGGTCAATGTTGGAAGTGGCTTCAGGTCCTGCATCCACCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CAA 72 bp GATGTGTCAAAGGGTTCAGCGGCCACCTTGCTGGAGTaGTCAAATAGAACCGCTCCCTCCTCTTCGTCACTC +
Preference number: 6 (lower is better)
Translates to: DVSKGSAATLLE*SNRTAPSSSSL
Trigger: GAGTGACGAAGAGGAGGGAGCGGTTCTATTTGACAACTCCAGCAAGGTGGCCGCTGAACCCTTTGACACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 72 bp GACCCAGAAGATGTGTCAAAGGGTTCAGCGGCCACCTaGCTGGAGTTGTCAAATAGAACCGCTCCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: DPEDVSKGSAAT*LELSNRTAPSS
Trigger: AGAGGAGGGAGCGGTTCTATTTGACAACTCCAGCAAGGTGGCCGCTGAACCCTTTGACACATCTTCTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 90 bp ACAGACTGTAAGTGTGGGGTGTGTTGCTTCAGGTCTGCAGTGACGTaGCTGACTCCATACACACCCAGCATTTCGATCACCACAGCAGGC +
Preference number: 6 (lower is better)
Translates to: TDCKCGVCCFRSAVT*LTPYTPSISITTAG
Trigger: GCCTGCTGTGGTGATCGAAATGCTGGGTGTGTATGGAGTCAGCAACGTCACTGCAGACCTGAAGCAACACACCCCACACTTACAGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 90 bp GCGACCTGCTTTGCTCTCTGCGGCAGGTTTATCATGGTGTCAGGCTaGAAGTCGTTCTTGTTCTTCCTGCAGAGCACGGCAGTGATGATG +
Preference number: 6 (lower is better)
Translates to: ATCFALCGRFIMVSG*KSFLFFLQSTAVMM
Trigger: CATCATCACTGCCGTGCTCTGCAGGAAGAACAAGAACGACTTCAAGCCTGACACCATGATAAACCTGCCGCAGAGAGCAAAGCAGGTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265654.6
CDS TCA 72 bp AGAGTGGGCATTTCTGGCACAGGAGATGGGGAGGCATaGTTCTCTGTGGGCTGGAGGAAAGTAAGTATGGAG +
Preference number: 6 (lower is better)
Translates to: RVGISGTGDGEA*FSVGWRKVSME
Trigger: CTCCATACTTACTTTCCTCCAGCCCACAGAGAATCATGCCTCCCCATCTCCTGTGCCAGAAATGCCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp TTGCTCTCTGCGGCAGGTTTATCATGGTGTCAGGCTTaGAGTCGTTCTTGTTCTTCCTGCAGAGCACGGCAG +
Preference number: 6 (lower is better)
Translates to: LLSAAGLSWCQA*SRSCSSCRARQ
Trigger: CTGCCGTGCTCTGCAGGAAGAACAAGAACGACTTCAAGCCTGACACCATGATAAACCTGCCGCAGAGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp ACCTGCTCTTCCTGGTTTCAGTGGATTTGGCGGTCTTaGTGGTGCTTCCATCCTGAGCGACGTCTCTTTCCT +
Preference number: 6 (lower is better)
Translates to: TCSSWFQWIWRS*WCFHPERRLFP
Trigger: AGGAAAGAGACGTCGCTCAGGATGGAAGCACCATCAAGACCGCCAAATCCACTGAAACCAGGAAGAGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp CTGCAGGGAAGTCGTAATATCCCTTCCTCTTGGCTTTaGGGCGCAGCTTGTTCCGATAGTGCTCGATGTCTG +
Preference number: 6 (lower is better)
Translates to: LQGSRNIPSSWL*GAACSDSARCL
Trigger: CAGACATCGAGCACTATCGGAACAAGCTGCGCCTCAAAGCCAAGAGGAAGGGATATTACGACTTCCCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp ACAATTTCCCGGGAGGAAATGACTCTGGAGTCCGGGTaGCATTCATCTGTAGATTGTCTGTTCCCGGGTCGG +
Preference number: 6 (lower is better)
Translates to: TISREEMTLESG*HSSVDCLFPGR
Trigger: CCGACCCGGGAACAGACAATCTACAGATGAATGTCACCCGGACTCCAGAGTCATTTCCTCCCGGGAAATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp TTGGGGGATTGCTCTGCTGGCTCAGAGATGATGGAATaGGGTGAGTCAGGAGCCAATGAAGAGGATGGAGGT +
Preference number: 6 (lower is better)
Translates to: LGDCSAGSEMME*GESGANEEDGG
Trigger: ACCTCCATCCTCTTCATTGGCTCCTGACTCACCTCATTCCATCATCTCTGAGCCAGCAGAGCAATCCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000658780.2
CDS GCA 72 bp GCAAGTACTGCCACAGACTGTAAGTGTGGGGTGTGTTaGTTCAGGTCTGCAGTGACGTTGCTGACTCCATAC +
Preference number: 6 (lower is better)
Translates to: ASTATDCKCGVC*FRSAVTLLTPY
Trigger: GTATGGAGTCAGCAACGTCACTGCAGACCTGAAGCAACACACCCCACACTTACAGTCTGTGGCAGTACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 72 bp ACCCAGAAGATGTGTCAAAGGGTTCAGCGGCCACCTTaGTGGAGTTGTCAAATAGAACCGCTCCCTCCTCTT +
Preference number: 6 (lower is better)
Translates to: TQKMCQRVQRPP*WSCQIEPLPPL
Trigger: AAGAGGAGGGAGCGGTTCTATTTGACAACTCCAGCAAGGTGGCCGCTGAACCCTTTGACACATCTTCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp CAACCCAGAATGGTCCACAGCAGCTGCATAAGCCTCTaGCTTGGTGCTGGAAAAGCCAAGAGATGGGAAAAC +
Preference number: 6 (lower is better)
Translates to: QPRMVHSSCISL*LGAGKAKRWEN
Trigger: GTTTTCCCATCTCTTGGCTTTTCCAGCACCAAGCCAGAGGCTTATGCAGCTGCTGTGGACCATTCTGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp TGCTTGTGGGCCAGAGGTCTATATGGCTTCCAACCATaGTCATGTCTGACTGTTGCACAGGCTGCTCAATGC +
Preference number: 6 (lower is better)
Translates to: CLWARGLYGFQP*SCLTVAQAAQC
Trigger: GCATTGAGCAGCCTGTGCAACAGTCAGACATGACCATGGTTGGAAGCCATATAGACCTCTGGCCCACAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp CTGGTGAGGTTAGCAAAAGAGGATGTGCTGGCTGGTTaGGCAACTGTAGCTGAGGATGAGACACGGAATGTC +
Preference number: 6 (lower is better)
Translates to: LVRLAKEDVLAG*ATVAEDETRNV
Trigger: GACATTCCGTGTCTCATCCTCAGCTACAGTTGCCCAACCAGCCAGCACATCCTCTTTTGCTAACCTCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp GCTCGTGGTATGTCCTGTTCTTGCATACATGTAGGTTaGTGTGAATGGGAAGGCTGTATGGACTGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: ARGMSCSCIHVG*CEWEGCMDCPW
Trigger: CCAGGGGCAGTCCATACAGCCTTCCCATTCACACCAACCTACATGTATGCAAGAACAGGACATACCACGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp CAGAAGATGTGTCAAAGGGTTCAGCGGCCACCTTGCTaGAGTTGTCAAATAGAACCGCTCCCTCCTCTTCGT +
Preference number: 6 (lower is better)
Translates to: QKMCQRVQRPPC*SCQIEPLPPLR
Trigger: ACGAAGAGGAGGGAGCGGTTCTATTTGACAACTCCAGCAAGGTGGCCGCTGAACCCTTTGACACATCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 72 bp TATACATCCATGGAGGAGGGCGATGCTCTCACCTGTTaGGAAGCTGAAGCTGGCAACCCAGAATGGTCCACA +
Preference number: 6 (lower is better)
Translates to: YTSMEEGDALTC*EAEAGNPEWST
Trigger: TGTGGACCATTCTGGGTTGCCAGCTTCAGCTTCCAAACAGGTGAGAGCATCGCCCTCCTCCATGGATGTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CAA 72 bp AAGTGTGGGGTGTGTTGCTTCAGGTCTGCAGTGACGTaGCTGACTCCATACACACCCAGCATTTCGATCACC +
Preference number: 6 (lower is better)
Translates to: KCGVCCFRSAVT*LTPYTPSISIT
Trigger: GGTGATCGAAATGCTGGGTGTGTATGGAGTCAGCAACGTCACTGCAGACCTGAAGCAACACACCCCACACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 72 bp CGGCATCCTGGAATGCCTTCTGCAGCCTCTGTTCCATaGTCTGAGCAAACTTGCAGGACTGTATGTTGTCCG +
Preference number: 6 (lower is better)
Translates to: RHPGMPSAASVP*SEQTCRTVCCP
Trigger: CGGACAACATACAGTCCTGCAAGTTTGCTCAGACAATGGAACAGAGGCTGCAGAAGGCATTCCAGGATGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 72 bp CAGAAGGACAACGTGATGAAGGGTCAAGGCCATCCTTaGGGAATCAATGGTGCTCAGGATCTTGGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: QKDNVMKGQGHP*GINGAQDLGSC
Trigger: GCAGCTGCCAAGATCCTGAGCACCATTGATTCCCAAAGGATGGCCTTGACCCTTCATCACGTTGTCCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 90 bp AAGGAATCATATACATCCATGGAGGAGGGCGATGCTCTCACCTGTTaGGAAGCTGAAGCTGGCAACCCAGAATGGTCCACAGCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: KESYTSMEEGDALTC*EAEAGNPEWSTAAA
Trigger: TGCAGCTGCTGTGGACCATTCTGGGTTGCCAGCTTCAGCTTCCAAACAGGTGAGAGCATCGCCCTCCTCCATGGATGTATATGATTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CAA 90 bp CTTTCCTCTCGGCATCCTGGAATGCCTTCTGCAGCCTCTGTTCCATaGTCTGAGCAAACTTGCAGGACTGTATGTTGTCCGCTTGGCTCA +
Preference number: 6 (lower is better)
Translates to: LSSRHPGMPSAASVP*SEQTCRTVCCPLGS
Trigger: TGAGCCAAGCGGACAACATACAGTCCTGCAAGTTTGCTCAGACAATGGAACAGAGGCTGCAGAAGGCATTCCAGGATGCCGAGAGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 90 bp TGCACAGGCTTTGCTCTCTGCGGCAGGTTTATCATGGTGTCAGGCTaGAAGTCGTTCTTGTTCTTCCTGCAGAGCACGGCAGTGATGATG +
Preference number: 6 (lower is better)
Translates to: CTGFALCGRFIMVSG*KSFLFFLQSTAVMM
Trigger: CATCATCACTGCCGTGCTCTGCAGGAAGAACAAGAACGACTTCAAGCCTGACACCATGATAAACCTGCCGCAGAGAGCAAAGCCTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 90 bp GCTCTCTGCGGCAGGTTTATCATGGTGTCAGGCTTGAAGTCGTTCTaGTTCTTCCTGCAGAGCACGGCAGTGATGATGATGATGATGACC +
Preference number: 6 (lower is better)
Translates to: ALCGRFIMVSGLKSF*FFLQSTAVMMMMMT
Trigger: GGTCATCATCATCATCATCACTGCCGTGCTCTGCAGGAAGAACAAGAACGACTTCAAGCCTGACACCATGATAAACCTGCCGCAGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp CCAGAGGTCTATATGGCTTCCAACCATGGTCATGTCTaGCTGTTGCACAGGCTGCTCAATGCTTGTACCGAG +
Preference number: 6 (lower is better)
Translates to: PEVYMASNHGHV*LLHRLLNACTE
Trigger: CTCGGTACAAGCATTGAGCAGCCTGTGCAACAGTCAGACATGACCATGGTTGGAAGCCATATAGACCTCTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp TGGTATGTCCTGTTCTTGCATACATGTAGGTTGGTGTaGATGGGAAGGCTGTATGGACTGCCCCTGGTGTCC +
Preference number: 6 (lower is better)
Translates to: WYVLFLHTCRLV*MGRLYGLPLVS
Trigger: GGACACCAGGGGCAGTCCATACAGCCTTCCCATTCACACCAACCTACATGTATGCAAGAACAGGACATACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS GCA 72 bp GTAGACAACAGGCCAGAGGCAGTGTCCATGTTTCCTTaGATGGCTGTATGTGTGCTCGTGGTATGTCCTGTT +
Preference number: 6 (lower is better)
Translates to: VDNRPEAVSMFP*MAVCVLVVCPV
Trigger: AACAGGACATACCACGAGCACACATACAGCCATGCAAGGAAACATGGACACTGCCTCTGGCCTGTTGTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp ACAACAGGCCAGAGGCAGTGTCCATGTTTCCTTGCATaGCTGTATGTGTGCTCGTGGTATGTCCTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: TTGQRQCPCFLA*LYVCSWYVLFL
Trigger: CAAGAACAGGACATACCACGAGCACACATACAGCCATGCAAGGAAACATGGACACTGCCTCTGGCCTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 72 bp GACCCTCTGTTGGGGACAGCTCGGAATGCCATTTTGTaGAGGATCCAGAAACACCTAGATGAGGGATGCCTA +
Preference number: 6 (lower is better)
Translates to: DPLLGTARNAIL*RIQKHLDEGCL
Trigger: TAGGCATCCCTCATCTAGGTGTTTCTGGATCCTCAACAAAATGGCATTCCGAGCTGTCCCCAACAGAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CAA 72 bp TGTAGACAACAGGCCAGAGGCAGTGTCCATGTTTCCTaGCATGGCTGTATGTGTGCTCGTGGTATGTCCTGT +
Preference number: 6 (lower is better)
Translates to: CRQQARGSVHVS*HGCMCARGMSC
Trigger: ACAGGACATACCACGAGCACACATACAGCCATGCAAGGAAACATGGACACTGCCTCTGGCCTGTTGTCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 90 bp GCTGGTTGGGCAACTGTAGCTGAGGATGAGACACGGAATGTCGAGTaGTGGGTGAGTAATATGCAACTTCAGCTGTTTGGAAGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: AGWATVAEDETRNVE*WVSNMQLQLFGSLW
Trigger: CCAGAGACTTCCAAACAGCTGAAGTTGCATATTACTCACCCACAACTCGACATTCCGTGTCTCATCCTCAGCTACAGTTGCCCAACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CAA 90 bp GCTGTATGGACTGCCCCTGGTGTCCTCTTTGGGCCAGATGCGGCCTaGTTTGTGACATTTTTAGCAAGAGTAGTCATCGAACTGCTCTTA +
Preference number: 6 (lower is better)
Translates to: AVWTAPGVLFGPDAA*FVTFLARVVIELLL
Trigger: TAAGAGCAGTTCGATGACTACTCTTGCTAAAAATGTCACAAACAAGGCCGCATCTGGCCCAAAGAGGACACCAGGGGCAGTCCATACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp TTGAGGATCCAGAAACACCTAGATGAGGGATGCCTATaGGATCCTGGGCATTTTGGGATGCAGTGTGGTCCA +
Preference number: 6 (lower is better)
Translates to: LRIQKHLDEGCL*DPGHFGMQCGP
Trigger: TGGACCACACTGCATCCCAAAATGCCCAGGATCTCATAGGCATCCCTCATCTAGGTGTTTCTGGATCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp AAGAGAACTGTCTTCACCAGGAGCTTACTGGACATCTaGCACTCCAGGTTGGATGCCATTTTGCCAGTCGTG +
Preference number: 6 (lower is better)
Translates to: KRTVFTRSLLDI*HSRLDAILPVV
Trigger: CACGACTGGCAAAATGGCATCCAACCTGGAGTGTCAGATGTCCAGTAAGCTCCTGGTGAAGACAGTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp GGGGCTCAGGAACTCTGTCAATGTTGGTTTCCTCTATaGTTTCAGGCTCAGTATCGTATCCGCTGTTGCGGA +
Preference number: 6 (lower is better)
Translates to: GAQELCQCWFPL*FQAQYRIRCCG
Trigger: TCCGCAACAGCGGATACGATACTGAGCCTGAAATCATAGAGGAAACCAACATTGACAGAGTTCCTGAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS GCA 72 bp CTTCTTTCTTTCGGTCAGACCCTTGCTCGTCTCCACTaGAGGGAAGTCGTAATATCCCTTCCTCTTGGCTTT +
Preference number: 6 (lower is better)
Translates to: LLSFGQTLARLH*REVVISLPLGF
Trigger: AAAGCCAAGAGGAAGGGATATTACGACTTCCCTGCAGTGGAGACGAGCAAGGGTCTGACCGAAAGAAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp TGCTGGAAAAGCCAAGAGATGGGAAAACAGTCTGGGTaGCTTGTATGGAGAGTATGGAAGGTAGAGGTGGTC +
Preference number: 6 (lower is better)
Translates to: CWKSQEMGKQSG*LVWRVWKVEVV
Trigger: GACCACCTCTACCTTCCATACTCTCCATACAAGCCACCCAGACTGTTTTCCCATCTCTTGGCTTTTCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp ATGTCCTGTTCTTGCATACATGTAGGTTGGTGTGAATaGGAAGGCTGTATGGACTGCCCCTGGTGTCCTCTT +
Preference number: 6 (lower is better)
Translates to: MSCSCIHVGWCE*EGCMDCPWCPL
Trigger: AAGAGGACACCAGGGGCAGTCCATACAGCCTTCCCATTCACACCAACCTACATGTATGCAAGAACAGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 90 bp GAGGTAAGTTGTAGACAACAGGCCAGAGGCAGTGTCCATGTTTCCTaGCATGGCTGTATGTGTGCTCGTGGTATGTCCTGTTCTTGCATA +
Preference number: 6 (lower is better)
Translates to: EVSCRQQARGSVHVS*HGCMCARGMSCSCI
Trigger: TATGCAAGAACAGGACATACCACGAGCACACATACAGCCATGCAAGGAAACATGGACACTGCCTCTGGCCTGTTGTCTACAACTTACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp TGTCCAAGATGTGGAAAGAAGATTAGGAACTTTGCTTaGGAGGAGCAAGTCTCTAGTTGCAGGAGGGGACCC +
Preference number: 6 (lower is better)
Translates to: CPRCGKKIRNFA*EEQVSSCRRGP
Trigger: GGGTCCCCTCCTGCAACTAGAGACTTGCTCCTCTCAAGCAAAGTTCCTAATCTTCTTTCCACATCTTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp AAGGGGATTCGTCCTTGGTGCTGTAATGATGGGAGATaGGACACTACCGGTGCTGAAATCAGAGACAAATCC +
Preference number: 6 (lower is better)
Translates to: KGIRPWCCNDGR*DTTGAEIRDKS
Trigger: GGATTTGTCTCTGATTTCAGCACCGGTAGTGTCTCATCTCCCATCATTACAGCACCAAGGACGAATCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp ACAGGCTGCTCAATGCTTGTACCGAGGACTAGATCCTaGATACTAAACCCTTCTGCAGTCACTGAATGCCCA +
Preference number: 6 (lower is better)
Translates to: TGCSMLVPRTRS*ILNPSAVTECP
Trigger: TGGGCATTCAGTGACTGCAGAAGGGTTTAGTATTCAGGATCTAGTCCTCGGTACAAGCATTGAGCAGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS GCA 72 bp TCTATATGGCTTCCAACCATGGTCATGTCTGACTGTTaGACAGGCTGCTCAATGCTTGTACCGAGGACTAGA +
Preference number: 6 (lower is better)
Translates to: SIWLPTMVMSDC*TGCSMLVPRTR
Trigger: TCTAGTCCTCGGTACAAGCATTGAGCAGCCTGTGCAACAGTCAGACATGACCATGGTTGGAAGCCATATAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS GCA 72 bp CATGGCTGTATGTGTGCTCGTGGTATGTCCTGTTCTTaGATACATGTAGGTTGGTGTGAATGGGAAGGCTGT +
Preference number: 6 (lower is better)
Translates to: HGCMCARGMSCS*IHVGWCEWEGC
Trigger: ACAGCCTTCCCATTCACACCAACCTACATGTATGCAAGAACAGGACATACCACGAGCACACATACAGCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 72 bp CAGCTGTTTGGAAGTCTCTGGAATGGTTGTTATTGCTaGTGGGCCAGAGGTCTATATGGCTTCCAACCATGG +
Preference number: 6 (lower is better)
Translates to: QLFGSLWNGCYC*WARGLYGFQPW
Trigger: CCATGGTTGGAAGCCATATAGACCTCTGGCCCACAAGCAATAACAACCATTCCAGAGACTTCCAAACAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CAA 90 bp ATGCAACTTCAGCTGTTTGGAAGTCTCTGGAATGGTTGTTATTGCTaGTGGGCCAGAGGTCTATATGGCTTCCAACCATGGTCATGTCTG +
Preference number: 6 (lower is better)
Translates to: MQLQLFGSLWNGCYC*WARGLYGFQPWSCL
Trigger: CAGACATGACCATGGTTGGAAGCCATATAGACCTCTGGCCCACAAGCAATAACAACCATTCCAGAGACTTCCAAACAGCTGAAGTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS GCA 72 bp CTTCAGCTGTTTGGAAGTCTCTGGAATGGTTGTTATTaGTTGTGGGCCAGAGGTCTATATGGCTTCCAACCA +
Preference number: 6 (lower is better)
Translates to: LQLFGSLWNGCY*LWARGLYGFQP
Trigger: TGGTTGGAAGCCATATAGACCTCTGGCCCACAAGCAATAACAACCATTCCAGAGACTTCCAAACAGCTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp GAATGGTTGTTATTGCTTGTGGGCCAGAGGTCTATATaGCTTCCAACCATGGTCATGTCTGACTGTTGCACA +
Preference number: 6 (lower is better)
Translates to: EWLLLLVGQRSI*LPTMVMSDCCT
Trigger: TGTGCAACAGTCAGACATGACCATGGTTGGAAGCCATATAGACCTCTGGCCCACAAGCAATAACAACCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp CTGTTTGGAAGTCTCTGGAATGGTTGTTATTGCTTGTaGGCCAGAGGTCTATATGGCTTCCAACCATGGTCA +
Preference number: 6 (lower is better)
Translates to: LFGSLWNGCYCL*ARGLYGFQPWS
Trigger: TGACCATGGTTGGAAGCCATATAGACCTCTGGCCCACAAGCAATAACAACCATTCCAGAGACTTCCAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp CCCAATAGTCTCTGGTTGTTTCTGATATGTCAAGGTTaGGATATTCCAGTGGTTCAGCAATGGTTAGCGGCG +
Preference number: 6 (lower is better)
Translates to: PNSLWLFLICQG*DIPVVQQWLAA
Trigger: CGCCGCTAACCATTGCTGAACCACTGGAATATCCCAACCTTGACATATCAGAAACAACCAGAGACTATTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CAA 72 bp ACTTCAGCTGTTTGGAAGTCTCTGGAATGGTTGTTATaGCTTGTGGGCCAGAGGTCTATATGGCTTCCAACC +
Preference number: 6 (lower is better)
Translates to: TSAVWKSLEWLL*LVGQRSIWLPT
Trigger: GGTTGGAAGCCATATAGACCTCTGGCCCACAAGCAATAACAACCATTCCAGAGACTTCCAAACAGCTGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CAA 72 bp GCAACTGTAGCTGAGGATGAGACACGGAATGTCGAGTaGTGGGTGAGTAATATGCAACTTCAGCTGTTTGGA +
Preference number: 6 (lower is better)
Translates to: ATVAEDETRNVE*WVSNMQLQLFG
Trigger: TCCAAACAGCTGAAGTTGCATATTACTCACCCACAACTCGACATTCCGTGTCTCATCCTCAGCTACAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp CCGGTGCTGAAATCAGAGACAAATCCATTTACAGTGTaGAGACTCAAAACCTCTTTCCTTGGAAAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: PVLKSETNPFTV*RLKTSFLGKAW
Trigger: CCAGGCCTTTCCAAGGAAAGAGGTTTTGAGTCTTCACACTGTAAATGGATTTGTCTCTGATTTCAGCACCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp CCTGTTTTTAGACTCGGTGAATGGAGCACAGAGTTCTaGATCTGGATCCAAAACATGCTCCATTTCCTTCGG +
Preference number: 6 (lower is better)
Translates to: PVFRLGEWSTEF*IWIQNMLHFLR
Trigger: CCGAAGGAAATGGAGCATGTTTTGGATCCAGATTCAGAACTCTGTGCTCCATTCACCGAGTCTAAAAACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321505.9
ENST00000658780.2
CDS GCA 72 bp CCTTTGGCGATACTGAACTTCAAGGATTCACTGATCTaGACTCTCCTTTGGGTGAGAAAGAGAACTGTCTTC +
Preference number: 6 (lower is better)
Translates to: PLAILNFKDSLI*TLLWVRKRTVF
Trigger: GAAGACAGTTCTCTTTCTCACCCAAAGGAGAGTGCAGATCAGTGAATCCTTGAAGTTCAGTATCGCCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp GATTCTGCAGTCTGGAAAAGTGGAGGCTCAGCCTCATaGGTCGCTGTTTCTGTATTCTTAAAAGTTGGCAAA +
Preference number: 6 (lower is better)
Translates to: DSAVWKSGGSAS*VAVSVFLKVGK
Trigger: TTTGCCAACTTTTAAGAATACAGAAACAGCGACCCATGAGGCTGAGCCTCCACTTTTCCAGACTGCAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp TCATGTCTCCTATTGTTAAGGAATCATATACATCCATaGAGGAGGGCGATGCTCTCACCTGTTTGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: SCLLLLRNHIHP*RRAMLSPVWKL
Trigger: CAGCTTCCAAACAGGTGAGAGCATCGCCCTCCTCCATGGATGTATATGATTCCTTAACAATAGGAGACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp GAGATTTTATGGCATCGGCAGCTGAAGTTAAACCATTaGGAGGAGCTGTTGGAGCTAAATGAGTTTCCCAAC +
Preference number: 6 (lower is better)
Translates to: EILWHRQLKLNH*EELLELNEFPN
Trigger: GTTGGGAAACTCATTTAGCTCCAACAGCTCCTCCCAATGGTTTAACTTCAGCTGCCGATGCCATAAAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp ACTGTAGCTGAGGATGAGACACGGAATGTCGAGTTGTaGGTGAGTAATATGCAACTTCAGCTGTTTGGAAGT +
Preference number: 6 (lower is better)
Translates to: TVAEDETRNVEL*VSNMQLQLFGS
Trigger: ACTTCCAAACAGCTGAAGTTGCATATTACTCACCCACAACTCGACATTCCGTGTCTCATCCTCAGCTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp CTGAACTTCAAGGATTCACTGATCTGCACTCTCCTTTaGGTGAGAAAGAGAACTGTCTTCACCAGGAGCTTA +
Preference number: 6 (lower is better)
Translates to: LNFKDSLICTLL*VRKRTVFTRSL
Trigger: TAAGCTCCTGGTGAAGACAGTTCTCTTTCTCACCCAAAGGAGAGTGCAGATCAGTGAATCCTTGAAGTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp TGGACGTGCTCACAATCTGAATTGTCAAGTTGCTTTTaGTATTCAGGACTTTCCTCTCGGCATCCTGGAATG +
Preference number: 6 (lower is better)
Translates to: WTCSQSELSSCF*YSGLSSRHPGM
Trigger: CATTCCAGGATGCCGAGAGGAAAGTCCTGAATACCAAAAGCAACTTGACAATTCAGATTGTGAGCACGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS TCA 72 bp GAAGTTAAACCATTGGGAGGAGCTGTTGGAGCTAAATaGGTTTCCCAACTTGTGGTGCTAATTGTGTGTCCA +
Preference number: 6 (lower is better)
Translates to: EVKPLGGAVGAK*VSQLVVLIVCP
Trigger: TGGACACACAATTAGCACCACAAGTTGGGAAACTCATTTAGCTCCAACAGCTCCTCCCAATGGTTTAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp GCAGTCACTGAATGCCCAGCAGTATCTTTGAAATCCTaGGATTTTATGGCATCGGCAGCTGAAGTTAAACCA +
Preference number: 6 (lower is better)
Translates to: AVTECPAVSLKS*DFMASAAEVKP
Trigger: TGGTTTAACTTCAGCTGCCGATGCCATAAAATCTCAGGATTTCAAAGATACTGCTGGGCATTCAGTGACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp AAGACACTGGTCGATATAGAAGATTCAGCAGCAGAGTaGTATCCCAAGATGTTCTGGAATGGTGTGGAAGCA +
Preference number: 6 (lower is better)
Translates to: KTLVDIEDSAAE*YPKMFWNGVEA
Trigger: TGCTTCCACACCATTCCAGAACATCTTGGGATATCACTCTGCTGCTGAATCTTCTATATCGACCAGTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CCA 72 bp GTGAGTAATATGCAACTTCAGCTGTTTGGAAGTCTCTaGAATGGTTGTTATTGCTTGTGGGCCAGAGGTCTA +
Preference number: 6 (lower is better)
Translates to: VSNMQLQLFGSL*NGCYCLWARGL
Trigger: TAGACCTCTGGCCCACAAGCAATAACAACCATTCCAGAGACTTCCAAACAGCTGAAGTTGCATATTACTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CAA 72 bp ATCCATTTACAGTGTGAAGACTCAAAACCTCTTTCCTaGGAAAGGCCTGGAGAGGAATCGTCACATTTGCCT +
Preference number: 6 (lower is better)
Translates to: IHLQCEDSKPLS*ERPGEESSHLP
Trigger: AGGCAAATGTGACGATTCCTCTCCAGGCCTTTCCAAGGAAAGAGGTTTTGAGTCTTCACACTGTAAATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CAA 72 bp TATGCAACTTCAGCTGTTTGGAAGTCTCTGGAATGGTaGTTATTGCTTGTGGGCCAGAGGTCTATATGGCTT +
Preference number: 6 (lower is better)
Translates to: YATSAVWKSLEW*LLLVGQRSIWL
Trigger: AAGCCATATAGACCTCTGGCCCACAAGCAATAACAACCATTCCAGAGACTTCCAAACAGCTGAAGTTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CAA 90 bp AACTCCAGAAAACATCTGTGGTTGCTGGCTTTTTCATGTCTCCTATaGTTAAGGAATCATATACATCCATGGAGGAGGGCGATGCTCTCA +
Preference number: 6 (lower is better)
Translates to: NSRKHLWLLAFSCLL*LRNHIHPWRRAMLS
Trigger: TGAGAGCATCGCCCTCCTCCATGGATGTATATGATTCCTTAACAATAGGAGACATGAAAAAGCCAGCAACCACAGATGTTTTCTGGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp GTCACTGGAAATTTCAGAACCTGTATCTGTTCCATCTaGAAGCATTTCCTGCAAGCTACCTGTAGAAGTTGG +
Preference number: 6 (lower is better)
Translates to: VTGNFRTCICSI*KHFLQATCRSW
Trigger: CCAACTTCTACAGGTAGCTTGCAGGAAATGCTTTCAGATGGAACAGATACAGGTTCTGAAATTTCCAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS TCA 72 bp CAGCACTGTAATTACCCAATAGTCTCTGGTTGTTTCTaGTATGTCAAGGTTGGGATATTCCAGTGGTTCAGC +
Preference number: 6 (lower is better)
Translates to: QHCNYPIVSGCF*YVKVGIFQWFS
Trigger: GCTGAACCACTGGAATATCCCAACCTTGACATATCAGAAACAACCAGAGACTATTGGGTAATTACAGTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000526400.6
ENST00000658780.2
CDS CCA 72 bp ATGCCTATGAGATCCTGGGCATTTTGGGATGCAGTGTaGTCCATTTCATCAGAAAATGGGATTAAGGGATTA +
Preference number: 6 (lower is better)
Translates to: MPMRSWAFWDAV*SISSENGIKGL
Trigger: TAATCCCTTAATCCCATTTTCTGATGAAATGGACCACACTGCATCCCAAAATGCCCAGGATCTCATAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2
CDS CAA 90 bp GAGATCCAGTTTCTGCTGAAAGAGAACTCCAGAAAACATCTGTGGTaGCTGGCTTTTTCATGTCTCCTATTGTTAAGGAATCATATACAT +
Preference number: 6 (lower is better)
Translates to: EIQFLLKENSRKHLW*LAFSCLLLLRNHIH
Trigger: ATGTATATGATTCCTTAACAATAGGAGACATGAAAAAGCCAGCAACCACAGATGTTTTCTGGAGTTCTCTTTCAGCAGAAACTGGATCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265654.6
ENST00000321505.9
ENST00000658780.2