RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIAA1522 (Homo sapiens)

Ensembl gene IDs: ENSG00000162522

Ensembl transcript IDs: ENST00000294521.7, ENST00000373480.1, ENST00000373481.7, ENST00000401073.7, ENST00000468130.1

Found 848 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGACTGGGCAGGAGGGCACAGACTGGTCCCAAGCTATGGGCTGACTaGCGGGGATGGATTCTGCTGCCATGTAAACAGGCCCTTGGAATG +
Preference number: 1 (lower is better)
Translates to: GLGRRAQTGPKLWAD*RGWILLPCKQALGM
Trigger: CATTCCAAGGGCCTGTTTACATGGCAGCAGAATCCATCCCCGGCAGTCAGCCCATAGCTTGGGACCAGTCTGTGCCCTCCTGCCCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR GCA 90 bp CAGTGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTaGCCCGAGATGACTCTACTGCTCACCCATTTCTTTGGGCCCTGG +
Preference number: 1 (lower is better)
Translates to: QCGQGGKGQVLDTAK*PEMTLLLTHFFGPW
Trigger: CCAGGGCCCAAAGAAATGGGTGAGCAGTAGAGTCATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR TCA 90 bp AGCCCCACACCTGCCCCCAGCCTAGAGAAGCCTGTGGGAACACAATaGCTTGGCCACCTTCAGGAACCAAGAGGAGTAAACTGGACTGGG +
Preference number: 1 (lower is better)
Translates to: SPTPAPSLEKPVGTQ*LGHLQEPRGVNWTG
Trigger: CCCAGTCCAGTTTACTCCTCTTGGTTCCTGAAGGTGGCCAAGTCATTGTGTTCCCACAGGCTTCTCTAGGCTGGGGGCAGGTGTGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR TCA 90 bp AAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATaGCTCTACTGCTCACCCATTTCTTTGGGCCCTGGCAGTCTCCTA +
Preference number: 1 (lower is better)
Translates to: KEARGRCLTLPSAPR*LYCSPISLGPGSLL
Trigger: TAGGAGACTGCCAGGGCCCAAAGAAATGGGTGAGCAGTAGAGTCATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR GCA 90 bp CCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTaGTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTG +
Preference number: 1 (lower is better)
Translates to: PWRLRLQAPSLLGCV*CILSSLELLGSLRL
Trigger: CAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR GCA 90 bp AGACTGGTCCCAAGCTATGGGCTGACTGCCGGGGATGGATTCTGCTaGCATGTAAACAGGCCCTTGGAATGCAACTTCCTGGGCCCTGGA +
Preference number: 1 (lower is better)
Translates to: RLVPSYGLTAGDGFC*HVNRPLECNFLGPG
Trigger: TCCAGGGCCCAGGAAGTTGCATTCCAAGGGCCTGTTTACATGGCAGCAGAATCCATCCCCGGCAGTCAGCCCATAGCTTGGGACCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR GCA 90 bp CACAGACTGGTCCCAAGCTATGGGCTGACTGCCGGGGATGGATTCTaGTGCCATGTAAACAGGCCCTTGGAATGCAACTTCCTGGGCCCT +
Preference number: 1 (lower is better)
Translates to: HRLVPSYGLTAGDGF*CHVNRPLECNFLGP
Trigger: AGGGCCCAGGAAGTTGCATTCCAAGGGCCTGTTTACATGGCAGCAGAATCCATCCCCGGCAGTCAGCCCATAGCTTGGGACCAGTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR TCA 90 bp ACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATaGGCGCAGGATGACTCTGAGGACAGGAGCAACACCAGGCTTGCA +
Preference number: 1 (lower is better)
Translates to: TEAATARGEPIREKA*AQDDSEDRSNTRLA
Trigger: TGCAAGCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR GCA 90 bp AAGAGAAGTCAGGTTCTCTCCCACCTCCAGCCATTCCCAGGTTGCTaGCAGGGCCTGGTTTCATGCAGCTTTGACCCAGTCCTGGATCCT +
Preference number: 1 (lower is better)
Translates to: KRSQVLSHLQPFPGC*QGLVSCSFDPVLDP
Trigger: AGGATCCAGGACTGGGTCAAAGCTGCATGAAACCAGGCCCTGGCAGCAACCTGGGAATGGCTGGAGGTGGGAGAGAACCTGACTTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR GCA 90 bp GGAAAGAGAAGTCAGGTTCTCTCCCACCTCCAGCCATTCCCAGGTTaGTGCCAGGGCCTGGTTTCATGCAGCTTTGACCCAGTCCTGGAT +
Preference number: 1 (lower is better)
Translates to: GKRSQVLSHLQPFPG*CQGLVSCSFDPVLD
Trigger: ATCCAGGACTGGGTCAAAGCTGCATGAAACCAGGCCCTGGCAGCAACCTGGGAATGGCTGGAGGTGGGAGAGAACCTGACTTCTCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CCA 90 bp AGGAGGGCACAGACTGGTCCCAAGCTATGGGCTGACTGCCGGGGATaGATTCTGCTGCCATGTAAACAGGCCCTTGGAATGCAACTTCCT +
Preference number: 1 (lower is better)
Translates to: RRAQTGPKLWADCRG*ILLPCKQALGMQLP
Trigger: AGGAAGTTGCATTCCAAGGGCCTGTTTACATGGCAGCAGAATCCATCCCCGGCAGTCAGCCCATAGCTTGGGACCAGTCTGTGCCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CCA 90 bp AAGTGCCCCGAGATGACTCTACTGCTCACCCATTTCTTTGGGCCCTaGCAGTCTCCTACTTGTCCCCAGCATGGAGCACCTGGCAGAACT +
Preference number: 1 (lower is better)
Translates to: KCPEMTLLLTHFFGP*QSPTCPQHGAPGRT
Trigger: AGTTCTGCCAGGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATGGGTGAGCAGTAGAGTCATCTCGGGGCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CCA 90 bp CTGAGCAGAACAGTGCTCACTGATTATCCTCTTTCCCCAACTCAGTaGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACA +
Preference number: 1 (lower is better)
Translates to: LSRTVLTDYPLSPTQ*AGAAYTQQHSPLPT
Trigger: TGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTTGGGGAAAGAGGATAATCAGTGAGCACTGTTCTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CCA 90 bp CTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGTaGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGC +
Preference number: 1 (lower is better)
Translates to: LRTGATPGLHKYRRP*RLRLQAPSLLGCVC
Trigger: GCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR TCA 90 bp GAAAATAGAAAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCTaGTACCTAGGGGACCACCACCCAGCCTGCCCTAGAAGCACTGGG +
Preference number: 1 (lower is better)
Translates to: ENRKVNIPGEYSKRG*YLGDHHPACPRSTG
Trigger: CCCAGTGCTTCTAGGGCAGGCTGGGTGGTGGTCCCCTAGGTATCAGCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CCA 90 bp CTGCTGCCATGTAAACAGGCCCTTGGAATGCAACTTCCTGGGCCCTaGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTTGATTCTG +
Preference number: 1 (lower is better)
Translates to: LLPCKQALGMQLPGP*RMAMQPLFKSALIL
Trigger: CAGAATCAAAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCATTCCAAGGGCCTGTTTACATGGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR TCA 90 bp ACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGGGAAGAATATTaGTTGATTAGCTACAAGGAGAAGACAGTAGTGACTAGTGGAAAA +
Preference number: 1 (lower is better)
Translates to: TPSSTLHCPQAREEY*LISYKEKTVVTSGK
Trigger: TTTTCCACTAGTCACTACTGTCTTCTCCTTGTAGCTAATCAATCAATATTCTTCCCTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR GCA 90 bp ATGTCAACCTCTCTCCTTGGTGGTGAAGCTAAAAGCAAGGTTCCTTaGCAGACTCAAGCCCAAGTCACTGTTAAGGAAAGAGGATCAAGA +
Preference number: 1 (lower is better)
Translates to: MSTSLLGGEAKSKVP*QTQAQVTVKERGSR
Trigger: TCTTGATCCTCTTTCCTTAACAGTGACTTGGGCTTGAGTCTGGCAAGGAACCTTGCTTTTAGCTTCACCACCAAGGAGAGAGGTTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR TCA 90 bp CAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGCAAGGGGCAGGTGCTTaGCACTGCCAAGTGCCCCGA +
Preference number: 2 (lower is better)
Translates to: QWAGAAYTQQHSPLPTGKQGAGA*HCQVPR
Trigger: TCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTG...CTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CCA 90 bp CAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGACTGGTCCCAAGCTATaGGCTGACTGCCGGGGATGG +
Preference number: 2 (lower is better)
Translates to: QWAGAAYTQQHSPLPTGKTGPKL*ADCRGW
Trigger: CCATCCCCGGCAGTCAGCCCATAGCTTGGGACCAGT...CTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR GCA 90 bp CCCAGCCTTGGTGAGGGGGCGGGGAGGTCATGTCAACCTCTCTCCTTGGTGGTGGCCGGGGATGGATTCTaGTGCCATGTAAACAGGCCC +
Preference number: 2 (lower is better)
Translates to: PSLGEGAGRSCQPLSLVVAGDGF*CHVNRP
Trigger: GGGCCTGTTTACATGGCAGCAGAATCCATCCCCGGC...CACCACCAAGGAGAGAGGTTGACATGACCTCCCCGCCCCCTCACCAAGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CCA 90 bp CCCCAGTGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCCTGGGCCCTGGAGGATaGCCATGCAGCCACTTTTCA +
Preference number: 2 (lower is better)
Translates to: PQCGQGGKGQVLDTAKCPLGPGG*PCSHFS
Trigger: TGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAG...GGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACACTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR GCA 90 bp CCCAGCCTTGGTGAGGGGGCGGGGAGGTCATGTCAACCTCTCTCCTTGGTGGTGAAGCTATGGGCTGACTaGCGGGGATGGATTCTGCTG +
Preference number: 2 (lower is better)
Translates to: PSLGEGAGRSCQPLSLVVKLWAD*RGWILL
Trigger: CAGCAGAATCCATCCCCGGCAGTCAGCCCATAGCTT...CACCACCAAGGAGAGAGGTTGACATGACCTCCCCGCCCCCTCACCAAGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR TCA 90 bp CAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGGGAAGAAGGGTGGTTGGTGAGTTaGGGCACAGGAAGGCCAATC +
Preference number: 2 (lower is better)
Translates to: QVQRTPSSTLHCPQAREEGWLVS*GTGRPI
Trigger: GATTGGCCTTCCTGTGCCTCAACTCACCAACCACCC...TTCTTCCCTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR TCA 90 bp TCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCTGAACAAGGGGCAGGTGCTTaGCACTGCCAAGTGCCCCGA +
Preference number: 2 (lower is better)
Translates to: SHPCHSALAAPSGTTCAEQGAGA*HCQVPR
Trigger: TCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTG...TTCAGCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CCA 90 bp CCCATTTCTTTGGGCCCTGGCAGTCTCCTACTTGTCCCCAGCATGGAGCACCTGCAACTTCCTGGGCCCTaGAGGATGGCCATGCAGCCA +
Preference number: 2 (lower is better)
Translates to: PISLGPGSLLLVPSMEHLQLPGP*RMAMQP
Trigger: TGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTG...CAGGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CCA 90 bp CCCCAGTGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGCTGACTGCCGGGGATaGATTCTGCTGCCATGTAAA +
Preference number: 2 (lower is better)
Translates to: PQCGQGGKGQVLDTAKCPADCRG*ILLPCK
Trigger: TTTACATGGCAGCAGAATCCATCCCCGGCAGTCAGC...GGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CAA 90 bp GTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATaGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTGCCTGGTG +
Preference number: 2 (lower is better)
Translates to: VCCILSSLELLGSLR*CFWDGSAVPVRCLV
Trigger: CACCAGGCACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CAA 90 bp TCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTaGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCT +
Preference number: 2 (lower is better)
Translates to: SKAVEVKAAGALSIR*CLLYPLVLGAARVP
Trigger: AGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CAA 90 bp AGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAACACCAGGCTaGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCC +
Preference number: 2 (lower is better)
Translates to: RHERRMTLRTGATPG*HKYRRPWRLRLQAP
Trigger: GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CAA 90 bp GACTCTACTGCTCACCCATTTCTTTGGGCCCTGGCAGTCTCCTACTaGTCCCCAGCATGGAGCACCTGGCAGAACTGGAAGGCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: DSTAHPFLWALAVSY*SPAWSTWQNWKAGG
Trigger: CCCTCCTGCCTTCCAGTTCTGCCAGGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATGGGTGAGCAGTAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR TCA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCAGCTGCTCGGGTCCCTaGGATTGTGTTTCTGGGATG +
Preference number: 2 (lower is better)
Translates to: APVASHPCHSALAAPSGTSCSGP*DCVSGM
Trigger: CATCCCAGAAACACAATCTCAGGGACCCGAGCAGCT...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR TCA 90 bp CAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGGGAAGAAAGCTGCTCGGGTCCCTaGGATTGTGTTTCTGGGATG +
Preference number: 2 (lower is better)
Translates to: QVQRTPSSTLHCPQAREESCSGP*DCVSGM
Trigger: CATCCCAGAAACACAATCTCAGGGACCCGAGCAGCT...TTCTTCCCTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR TCA 90 bp CCAACTCAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACACCTGTGGGAACACAATaGCTTGGCCACCTTCAGGAA +
Preference number: 2 (lower is better)
Translates to: PTQWAGAAYTQQHSPLPTPVGTQ*LGHLQE
Trigger: TTCCTGAAGGTGGCCAAGTCATTGTGTTCCCACAGG...TGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR GCA 90 bp CCCCAGTGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGCAACACCAGGCTTaGATAAGTATCGAAGGCCGT +
Preference number: 2 (lower is better)
Translates to: PQCGQGGKGQVLDTAKCPEQHQA*ISIEGR
Trigger: ACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTC...GGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CCA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCTGGAATGCAACTTCCTaGGCCCTGGAGGATGGCCAT +
Preference number: 2 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCWNATS*ALEDGH
Trigger: ATGGCCATCCTCCAGGGCCCAGGAAGTTGCATTCCA...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CCA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCGCTCACCCATTTCTTTaGGCCCTGGCAGTCTCCTAC +
Preference number: 2 (lower is better)
Translates to: APVASHPCHSALAAPSGTAHPFL*ALAVSY
Trigger: GTAGGAGACTGCCAGGGCCCAAAGAAATGGGTGAGC...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR TCA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCATTCGGGAAAAGGCATaGGCGCAGGATGACTCTGAG +
Preference number: 2 (lower is better)
Translates to: APVASHPCHSALAAPSGTIREKA*AQDDSE
Trigger: CTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAAT...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR GCA 90 bp CCCAGCCTTGGTGAGGGGGCGGGGAGGTCATGTCAACCTCTCTCCTTGGTGGTGAAGGCCAATCCCCTCTaGACCTTTTGTGCTTTGGAA +
Preference number: 2 (lower is better)
Translates to: PSLGEGAGRSCQPLSLVVKANPL*TFCALE
Trigger: TTCCAAAGCACAAAAGGTGCAGAGGGGATTGGCCTT...CACCACCAAGGAGAGAGGTTGACATGACCTCCCCGCCCCCTCACCAAGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR GCA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCCTTGACACTGCCAAGTaGCCCGAGATGACTCTACTG +
Preference number: 2 (lower is better)
Translates to: APVASHPCHSALAAPSGTLDTAK*PEMTLL
Trigger: CAGTAGAGTCATCTCGGGGCACTTGGCAGTGTCAAG...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CCA 90 bp CAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGACTCTATACTTGTCCCCAGCATaGAGCACCTGGCAGAACTGG +
Preference number: 2 (lower is better)
Translates to: QGGKGQVLDTAKCPEMTLYLSPA*STWQNW
Trigger: CCAGTTCTGCCAGGTGCTCCATGCTGGGGACAAGTA...TAGAGTCATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR TCA 90 bp CAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGACTCTACCTGTGGGAACACAATaGCTTGGCCACCTTCAGGAA +
Preference number: 2 (lower is better)
Translates to: QGGKGQVLDTAKCPEMTLPVGTQ*LGHLQE
Trigger: TTCCTGAAGGTGGCCAAGTCATTGTGTTCCCACAGG...TAGAGTCATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR TCA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCGGACATGCACCGAAATaGGGAGAGAGAAAGGTCAGA +
Preference number: 2 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCGHAPK*GERKVR
Trigger: TCTGACCTTTCTCTCTCCTCATTTCGGTGCATGTCC...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CCA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCATTGTGTTTCTGGGATaGGTCAGCAGTGCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: APVASHPCHSALAAPSGTIVFLG*VSSASE
Trigger: CTCACTGGCACTGCTGACCCATCCCAGAAACACAAT...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CCA 90 bp TCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCTGAAAAGTATCGAAGGCCGTaGAGGTTAAGGCTGCAGGCG +
Preference number: 2 (lower is better)
Translates to: SHPCHSALAAPSGTTCAEKYRRP*RLRLQA
Trigger: CGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT...TTCAGCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CAA 90 bp CAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTaGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCA +
Preference number: 2 (lower is better)
Translates to: QAPSLLGCVCCILSS*ELLGSLRLCFWDGS
Trigger: TGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR TCA 90 bp AAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCAAGCTGCTCGGGTCCCTaGGATTGTGTTTCTGGGATG +
Preference number: 2 (lower is better)
Translates to: KAKTEAATARGEPIREKASCSGP*DCVSGM
Trigger: CATCCCAGAAACACAATCTCAGGGACCCGAGCAGCT...TGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR TCA 90 bp ATGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTGGCAACTGCCAGAGGTaGACCCATTCGGGAAAAGGC +
Preference number: 2 (lower is better)
Translates to: MQLPGPWRMAMQPLFKSAGNCQR*THSGKG
Trigger: GCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCC...AGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR GCA 90 bp TGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTTCAGGTGAGGTGTCCTaGTCCCAACTCTGCAGCCTC +
Preference number: 2 (lower is better)
Translates to: CNFLGPGGWPCSHFSKVLSGEVS*SQLCSL
Trigger: GAGGCTGCAGAGTTGGGAGCAGGACACCTCACCTGA...AAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CCA 90 bp ACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCCTGAGATTGTGTTTCTaGGATGGGTCAGCAGTGCCA +
Preference number: 2 (lower is better)
Translates to: TPGLHKYRRPWRLRLQAPLRLCF*DGSAVP
Trigger: TGGCACTGCTGACCCATCCCAGAAACACAATCTCAG...GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR TCA 90 bp AGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAAGCTGCTCGGGTCCCTaGGATTGTGTTTCTGGGATG +
Preference number: 2 (lower is better)
Translates to: SYPLQDEAKAKTEAATARSCSGP*DCVSGM
Trigger: CATCCCAGAAACACAATCTCAGGGACCCGAGCAGCT...TCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CAA 90 bp GCCTGCCCTAGAAGCACTGGGTGCCCCTCATTGACTAGAGAAGACTaGAGTAAAATGCACCTGTGGCTTCCCATCCTTGTCACTCAGCGT +
Preference number: 2 (lower is better)
Translates to: ACPRSTGCPSLTRED*SKMHLWLPILVTQR
Trigger: ACGCTGAGTGACAAGGATGGGAAGCCACAGGTGCATTTTACTCAAGTCTTCTCTAGTCAATGAGGGGCACCCAGTGCTTCTAGGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR TCA 90 bp TGCTGCCATGTAAACAGGCCCTTGGAATGCAACTTCCTGGGCCCTGGAGGATGGAAAATGAAACTCAGGTaGGGTGTCCTGCTCCCAACT +
Preference number: 2 (lower is better)
Translates to: CCHVNRPLECNFLGPGGWKMKLR*GVLLPT
Trigger: AGTTGGGAGCAGGACACCTCACCTGAGTTTCATTTT...CCATCCTCCAGGGCCCAGGAAGTTGCATTCCAAGGGCCTGTTTACATGGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CCA 90 bp AAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCAATTGTGTTTCTGGGATaGGTCAGCAGTGCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: KAKTEAATARGEPIREKAIVFLG*VSSASE
Trigger: CTCACTGGCACTGCTGACCCATCCCAGAAACACAAT...TGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR GCA 90 bp TACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAGCAACACCAGGCTTaGATAAGTATCGAAGGCCGT +
Preference number: 2 (lower is better)
Translates to: YPLQDEAKAKTEAATARGEQHQA*ISIEGR
Trigger: ACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTC...ACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CCA 90 bp TCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCATTGTGTTTCTGGGATaGGTCAGCAGTGCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: SLLGCVCCILSSLELLGSIVFLG*VSSASE
Trigger: CTCACTGGCACTGCTGACCCATCCCAGAAACACAAT...GGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CCA 90 bp GTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTGAGATTGTGTTTCTaGGATGGGTCAGCAGTGCCA +
Preference number: 2 (lower is better)
Translates to: VKAAGALSIRLCLLYPLVLRLCF*DGSAVP
Trigger: TGGCACTGCTGACCCATCCCAGAAACACAATCTCAG...GACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR GCA 90 bp AGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATCTATTAGGTTGTGTCTaGTGTATCCTCTCGTCCTTG +
Preference number: 2 (lower is better)
Translates to: RPRLKRQLPEVNPFGKRHLLGCV*CILSSL
Trigger: CAAGGACGAGAGGATACAGCAGACACAACCTAATAG...ATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR GCA 90 bp TTGGAATGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAACTATTAGGTTGTGTCTaGTGTATCCTCTCGTCCTTG +
Preference number: 2 (lower is better)
Translates to: LECNFLGPGGWPCSHFSKLLGCV*CILSSL
Trigger: CAAGGACGAGAGGATACAGCAGACACAACCTAATAG...TTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCATTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR GCA 90 bp AAAAATCAGAGGCTTTTGGTCTCTCCATTTACTCTAGGTCAAGCTCATTTACCCCCTCTGCACCTTTTGTaGTTTGGAATTCCACAGCCC +
Preference number: 2 (lower is better)
Translates to: KNQRLLVSPFTLGQAHLPPLHLL*FGIPQP
Trigger: GGGCTGTGGAATTCCAAAGCACAAAAGGTGCAGAGG...GGGTAAATGAGCTTGACCTAGAGTAAATGGAGAGACCAAAAGCCTCTGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CAA 90 bp CCCAGCCTTGGTGAGGGGGCGGGGAGGTCATGTCAACCTCTCTCCTTGGTGGTGAGGGTGGTTGGTGAGTaGAGGCACAGGAAGGCCAAT +
Preference number: 3 (lower is better)
Translates to: PSLGEGAGRSCQPLSLVVRVVGE*RHRKAN
Trigger: ATTGGCCTTCCTGTGCCTCAACTCACCAACCACCCT...CACCACCAAGGAGAGAGGTTGACATGACCTCCCCGCCCCCTCACCAAGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR TCA 72 bp AGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATaGCTCTACTGCTCACCCATTTCTTTGGGCCCTGGC +
Preference number: 3 (lower is better)
Translates to: RGRCLTLPSAPR*LYCSPISLGPG
Trigger: GCCAGGGCCCAAAGAAATGGGTGAGCAGTAGAGTCATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR GCA 72 bp AGGAGGGCACAGACTGGTCCCAAGCTATGGGCTGACTaGCGGGGATGGATTCTGCTGCCATGTAAACAGGCC +
Preference number: 3 (lower is better)
Translates to: RRAQTGPKLWAD*RGWILLPCKQA
Trigger: GGCCTGTTTACATGGCAGCAGAATCCATCCCCGGCAGTCAGCCCATAGCTTGGGACCAGTCTGTGCCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CCA 72 bp TCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTaGGATGGGTCAGCAGTGCCAGTGAGGTGCCTGGTG +
Preference number: 3 (lower is better)
Translates to: SLELLGSLRLCF*DGSAVPVRCLV
Trigger: CACCAGGCACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CCA 72 bp CTAGTGGAAAACACCCTGGAGAGGGCCAGAGGAACCTaGCTCTCACCACATCCCCTCTGTTCCCAGCCTTGG +
Preference number: 3 (lower is better)
Translates to: LVENTLERARGT*LSPHPLCSQPW
Trigger: CCAAGGCTGGGAACAGAGGGGATGTGGTGAGAGCCAGGTTCCTCTGGCCCTCTCCAGGGTGTTTTCCACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CAA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCAGGGTGGTTGGTGAGTaGAGGCACAGGAAGGCCAAT +
Preference number: 3 (lower is better)
Translates to: APVASHPCHSALAAPSGTRVVGE*RHRKAN
Trigger: ATTGGCCTTCCTGTGCCTCAACTCACCAACCACCCT...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CAA 90 bp CCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACATGTATCCTCTCGTCCTaGGAGCTGCTCGGGTCCCTG +
Preference number: 3 (lower is better)
Translates to: PEVNPFGKRHERRMTLRTCILSS*ELLGSL
Trigger: CAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACA...TGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CAA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGTGTATCCTCTCGTCCTaGGAGCTGCTCGGGTCCCTG +
Preference number: 3 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHECILSS*ELLGSL
Trigger: CAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACA...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR TCA 72 bp GCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTaGGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAG +
Preference number: 3 (lower is better)
Translates to: AVSSRPWSCSGP*DCVSGMGQQCQ
Trigger: CTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CAA 90 bp TTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAACACCAGGCCTCGGGTCCCTGAGATaGTGTTTCTGGGATGGGTCA +
Preference number: 3 (lower is better)
Translates to: FGKRHERRMTLRTGATPGLGSLR*CFWDGS
Trigger: TGACCCATCCCAGAAACACAATCTCAGGGACCCGAG...GCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CAA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCTGCACCTTTTGTGCTTaGGAATTCCACAGCCCCACA +
Preference number: 3 (lower is better)
Translates to: APVASHPCHSALAAPSGTCTFCA*EFHSPT
Trigger: TGTGGGGCTGTGGAATTCCAAAGCACAAAAGGTGCA...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR TCA 72 bp GCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATaGGCGCAGGATGACTCTGAGGACAGGAGCAACACC +
Preference number: 3 (lower is better)
Translates to: ATARGEPIREKA*AQDDSEDRSNT
Trigger: GGTGTTGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR GCA 72 bp TTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTaGTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCC +
Preference number: 3 (lower is better)
Translates to: LRLQAPSLLGCV*CILSSLELLGS
Trigger: GGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CCA 72 bp CAGACTGGTCCCAAGCTATGGGCTGACTGCCGGGGATaGATTCTGCTGCCATGTAAACAGGCCCTTGGAATG +
Preference number: 3 (lower is better)
Translates to: QTGPKLWADCRG*ILLPCKQALGM
Trigger: CATTCCAAGGGCCTGTTTACATGGCAGCAGAATCCATCCCCGGCAGTCAGCCCATAGCTTGGGACCAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CAA 90 bp GCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGCTCGGGTCCCTGAGATaGTGTTTCTGGGATGGGTCA +
Preference number: 3 (lower is better)
Translates to: ATHFKMRLRPRLKRQLPELGSLR*CFWDGS
Trigger: TGACCCATCCCAGAAACACAATCTCAGGGACCCGAG...CTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CAA 90 bp TATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCCTCGGGTCCCTGAGATaGTGTTTCTGGGATGGGTCA +
Preference number: 3 (lower is better)
Translates to: YRRPWRLRLQAPSLLGCVLGSLR*CFWDGS
Trigger: TGACCCATCCCAGAAACACAATCTCAGGGACCCGAG...GACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR TCA 72 bp CCTGCCCCCAGCCTAGAGAAGCCTGTGGGAACACAATaGCTTGGCCACCTTCAGGAACCAAGAGGAGTAAAC +
Preference number: 3 (lower is better)
Translates to: PAPSLEKPVGTQ*LGHLQEPRGVN
Trigger: GTTTACTCCTCTTGGTTCCTGAAGGTGGCCAAGTCATTGTGTTCCCACAGGCTTCTCTAGGCTGGGGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR GCA 72 bp CAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTaGCCCGAGATGACTCTACTGCTCACCCATTTCTTT +
Preference number: 3 (lower is better)
Translates to: QGGKGQVLDTAK*PEMTLLLTHFF
Trigger: AAAGAAATGGGTGAGCAGTAGAGTCATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR GCA 72 bp GGGGACCACCACCCAGCCTGCCCTAGAAGCACTGGGTaGCCCTCATTGACTAGAGAAGACTTGAGTAAAATG +
Preference number: 3 (lower is better)
Translates to: GDHHPACPRSTG*PSLTREDLSKM
Trigger: CATTTTACTCAAGTCTTCTCTAGTCAATGAGGGGCACCCAGTGCTTCTAGGGCAGGCTGGGTGGTGGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CCA 72 bp GGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGTaGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGT +
Preference number: 3 (lower is better)
Translates to: GATPGLHKYRRP*RLRLQAPSLLG
Trigger: ACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CCA 72 bp ACAGTGCTCACTGATTATCCTCTTTCCCCAACTCAGTaGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCA +
Preference number: 3 (lower is better)
Translates to: TVLTDYPLSPTQ*AGAAYTQQHSP
Trigger: TGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTTGGGGAAAGAGGATAATCAGTGAGCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CAA 90 bp TTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAACACCAGGCGCCCTCTCTATTAGGTaGTGTCTGCTGTATCCTCTC +
Preference number: 3 (lower is better)
Translates to: FGKRHERRMTLRTGATPGALSIR*CLLYPL
Trigger: GAGAGGATACAGCAGACACAACCTAATAGAGAGGGC...GCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CAA 90 bp AGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGAGCAACACCAGGCTaGCATAAGTATCGAAGGCCG +
Preference number: 3 (lower is better)
Translates to: SYPLQDEAKAKTEAATARGATPG*HKYRRP
Trigger: CGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCC...TCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CAA 90 bp GGAGCTCTGAGCAGAACAGTGCTCACTGATTATCCTCTTTCCCCAACTCAGTGGAATGGGGAAGCCAGCTaGCCTAGACAGGTGGCACAG +
Preference number: 3 (lower is better)
Translates to: GALSRTVLTDYPLSPTQWNGEAS*PRQVAQ
Trigger: CTGTGCCACCTGTCTAGGCAAGCTGGCTTCCCCATT...CCACTGAGTTGGGGAAAGAGGATAATCAGTGAGCACTGTTCTGCTCAGAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR TCA 72 bp AAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCTaGTACCTAGGGGACCACCACCCAGCCTGCCCTAGA +
Preference number: 3 (lower is better)
Translates to: KVNIPGEYSKRG*YLGDHHPACPR
Trigger: TCTAGGGCAGGCTGGGTGGTGGTCCCCTAGGTATCAGCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CAA 90 bp CTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCGCCCTCTCTATTAGGTaGTGTCTGCTGTATCCTCTC +
Preference number: 3 (lower is better)
Translates to: LQDEAKAKTEAATARGEPALSIR*CLLYPL
Trigger: GAGAGGATACAGCAGACACAACCTAATAGAGAGGGC...GGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CCA 72 bp TGTAAACAGGCCCTTGGAATGCAACTTCCTGGGCCCTaGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCT +
Preference number: 3 (lower is better)
Translates to: CKQALGMQLPGP*RMAMQPLFKSA
Trigger: AGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCATTCCAAGGGCCTGTTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR-3UTR CAA 90 bp AAAAATCAGAGGCTTTTGGTCTCTCCATTTACTCTAGGTCAAGCTCATTTACCCTGCTCACCCATTTCTTaGGGCCCTGGCAGTCTCCTA +
Preference number: 3 (lower is better)
Translates to: KNQRLLVSPFTLGQAHLPCSPIS*GPGSLL
Trigger: TAGGAGACTGCCAGGGCCCAAAGAAATGGGTGAGCA...GGGTAAATGAGCTTGACCTAGAGTAAATGGAGAGACCAAAAGCCTCTGATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR GCA 72 bp TCTCTCCTTGGTGGTGAAGCTAAAAGCAAGGTTCCTTaGCAGACTCAAGCCCAAGTCACTGTTAAGGAAAGA +
Preference number: 3 (lower is better)
Translates to: SLLGGEAKSKVP*QTQAQVTVKER
Trigger: TCTTTCCTTAACAGTGACTTGGGCTTGAGTCTGGCAAGGAACCTTGCTTTTAGCTTCACCACCAAGGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR TCA 72 bp AGCACTCTCCACTGCCCACAGGCAAGGGAAGAATATTaGTTGATTAGCTACAAGGAGAAGACAGTAGTGACT +
Preference number: 3 (lower is better)
Translates to: STLHCPQAREEY*LISYKEKTVVT
Trigger: AGTCACTACTGTCTTCTCCTTGTAGCTAATCAATCAATATTCTTCCCTTGCCTGTGGGCAGTGGAGAGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGTGCCCCCGCCCCTTCTaGGCCACCAGTGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QWAGAAYTQQHSPLPTGKCPRPF*ATSGGW
Trigger: CCACCCACCACTGGTGGCTCAGAAGGGGCGGGGGCA...CTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCCAGCCTTGGTGAGGGGGCGGGGAGGTCATGTCAACCTCTCTCCTTGGTGGTGCGGGCTCAGGGGCTCTaGAGGCCCTGCCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PSLGEGAGRSCQPLSLVVRAQGL*RPCPSC
Trigger: ACAGGAGGGGCAGGGCCTGCAGAGCCCCTGAGCCCG...CACCACCAAGGAGAGAGGTTGACATGACCTCCCCGCCCCCTCACCAAGGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCTGGGCTGGCCCGCCCTaGCAGGGCCCTTCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCWAGPP*QGPSQW
Trigger: CCACTGCGAAGGGCCCTGTCAGGGCGGGCCAGCCCA...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCCAGCCTTGGTGAGGGGGCGGGGAGGTCATGTCAACCTCTCTCCTTGGTGGTGCGCAGCCGCACCATCTaGAGGAGCGAGGGCGTGACC +
Preference number: 4 (lower is better)
Translates to: PSLGEGAGRSCQPLSLVVRSRTI*RSEGVT
Trigger: GGTCACGCCCTCGCTCCTGCAGATGGTGCGGCTGCG...CACCACCAAGGAGAGAGGTTGACATGACCTCCCCGCCCCCTCACCAAGGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGGCAGGAGCGAGGGCGTaGCCAGGGGCGCACCTACGT +
Preference number: 4 (lower is better)
Translates to: CGQGGKGQVLDTAKCPEMAGARA*PGAHLR
Trigger: ACGTAGGTGCGCCCCTGGTCACGCCCTCGCTCCTGC...CATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTGTGGGCTGGCCCGCCCTaGCAGGGCCCTTCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ARVPEIVFLGWVSSASEVWAGPP*QGPSQW
Trigger: CCACTGCGAAGGGCCCTGTCAGGGCGGGCCAGCCCA...CACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCCAGCCTTGGTGAGGGGGCGGGGAGGTCATGTCAACCTCTCTCCTTGGTGGTGCCAGGCTGCAGGCCTTaGGTCGGACCGCAGCATGGA +
Preference number: 4 (lower is better)
Translates to: PSLGEGAGRSCQPLSLVVPGCRP*VGPQHG
Trigger: TCCATGCTGCGGTCCGACTCAAGGCCTGCAGCCTGG...CACCACCAAGGAGAGAGGTTGACATGACCTCCCCGCCCCCTCACCAAGGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCGGGAGGCCGTGGCTCTaGCTCAGGCGGTCCGTTGGG +
Preference number: 4 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCGRPWL*LRRSVG
Trigger: CCCAACGGACCGCCTGAGGCAGAGCCACGGCCTCCC...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGGGAAGAAGCCACCAGTGGTGGGTaGCCGAGGCAGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QVQRTPSSTLHCPQAREEATSGG*PRQLGL
Trigger: CAGCCCCAGCTGCCTCGGCCACCCACCACTGGTGGC...TTCTTCCCTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCGGGCTGGGCCTTGCCTaGGGAAGCAGGGGGACCTGC +
Preference number: 4 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCGLGLA*GSRGTC
Trigger: GCAGGTCCCCCTGCTTCCCCAGGCAAGGCCCAGCCC...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCAACTCAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGACCCGGGGACCGCTaGGGGCCTTCCTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: PTQWAGAAYTQQHSPLPTGPGDR*GPSSCG
Trigger: ACCACAAGAGGAAGGCCCCCAGCGGTCCCCGGGTCC...TGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373481.7
CDS-3UTR TCA 90 bp CCACCCTCTCCCGCCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAACCCCAGCGAGCGGACTaGGGCTGGGCTGGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: PPSPASYPLQDEAKAKTEPQRAD*GWAGRV
Trigger: CACTCGGCCAGCCCAGCCTCAGTCCGCTCGCTGGGG...TTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGGCGGGAGAGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTTGCCCCCGCCCCTTCTaGGCCACCAGTGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GAARVPEIVFLGWVSSASCPRPF*ATSGGW
Trigger: CCACCCACCACTGGTGGCTCAGAAGGGGCGGGGGCA...ACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCCAGCCTTGGTGAGGGGGCGGGGAGGTCATGTCAACCTCTCTCCTTGGTGGTGGGCGGTCCGTTGGGCTaGGCACTTGAGAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PSLGEGAGRSCQPLSLVVGGPLG*ALERPS
Trigger: TGAAGGCCTCTCAAGTGCTCAGCCCAACGGACCGCC...CACCACCAAGGAGAGAGGTTGACATGACCTCCCCGCCCCCTCACCAAGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGCAGGAGCCCGGGGCGTaGCTGGTGCCTCACGCTCAT +
Preference number: 4 (lower is better)
Translates to: CGQGGKGQVLDTAKCPEMQEPGA*LVPHAH
Trigger: ATGAGCGTGAGGCACCAGGCACGCCCCGGGCTCCTG...CATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGAGGCCTCAGCAGTGCTaGCCCCACTGGGAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: CGQGGKGQVLDTAKCPEMRPQQC*PHWESP
Trigger: GGGGCTCTCCCAGTGGGGGCAGCACTGCTGAGGCCT...CATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGACTCTACCGCCGCCTTCTTCTTaGGCCGCTTGCCCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: QGGKGQVLDTAKCPEMTLPPPSS*AACPAA
Trigger: GGCTGCGGGGCAAGCGGCGCAAGAAGAAGGCGGCGG...TAGAGTCATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS-3UTR CCA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCTGCGGGGCTGTGGGCTaGAGACGGAGGAGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: APVASHPCHSALAAPSGTCGAVG*RRRRSA
Trigger: GGCGCTTCTCCTCCGTCTCCAGCCCACAGCCCCGCA...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGGCCACCAGTGGTGGGTaGCCGAGGCAGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ELLGSLRLCFWDGSAVPVATSGG*PRQLGL
Trigger: CAGCCCCAGCTGCCTCGGCCACCCACCACTGGTGGC...CACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCGTTGGCTGGGTTGGGTaGACAGGGTGCTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: APVASHPCHSALAAPSGTVGWVG*TGCCPR
Trigger: GCGGGGGCAGCACCCTGTCCACCCAACCCAGCCAAC...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGGGGCTGGGCCTTGCCTaGGGAAGCAGGGGGACCTGC +
Preference number: 4 (lower is better)
Translates to: ELLGSLRLCFWDGSAVPVGLGLA*GSRGTC
Trigger: GCAGGTCCCCCTGCTTCCCCAGGCAAGGCCCAGCCC...CACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCCCAGTGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCTTGAGAGGCCTTCACTaGCGGCCAGGCTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PQCGQGGKGQVLDTAKCPLRGLH*RPGCRP
Trigger: AGGCCTGCAGCCTGGCCGCCAGTGAAGGCCTCTCAA...GGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACACTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCACCCCAGCGAGCGGACTaGGGCTGGGCTGGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPPQRAD*GWAGRV
Trigger: CACTCGGCCAGCCCAGCCTCAGTCCGCTCGCTGGGG...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGGGGCTACCCGGGGGCTaGATCTGCAAAGCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: QWAGAAYTQQHSPLPTGKGLPGG*ICKAVA
Trigger: AGCTACTGCTTTGCAGATTCAGCCCCCGGGTAGCCC...CTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCATGGGCTGGCCCGCCCTaGCAGGGCCCTTCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VNPFGKRHERRMTLRTGAWAGPP*QGPSQW
Trigger: CCACTGCGAAGGGCCCTGTCAGGGCGGGCCAGCCCA...TGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCAACTCAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACACAAGGGGCAGGTGCTTaGCACTGCCAAGTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: PTQWAGAAYTQQHSPLPTQGAGA*HCQVPR
Trigger: TCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTG...TGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCACCCTCTCCCGCCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGTACGGCATCCCGTaGACCAGGAGCCCGGGGCGT +
Preference number: 4 (lower is better)
Translates to: PPSPASYPLQDEAKAKTEAYGIP*TRSPGR
Trigger: ACGCCCCGGGCTCCTGGTGCACGGGATGCCGTACGC...TTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGGCGGGAGAGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGGCGTACGGCATCCCGTaGACCAGGAGCCCGGGGCGT +
Preference number: 4 (lower is better)
Translates to: GCVCCILSSLELLGSLRLAYGIP*TRSPGR
Trigger: ACGCCCCGGGCTCCTGGTGCACGGGATGCCGTACGC...CAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCCCCCATCCCTGAGGTaGCTCGGGGGCGGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: QAPSLLGCVCCILSSLELPPSLR*LGGGRP
Trigger: TGGACGGCCGCCCCCGAGGCACCTCAGGGATGGGGG...CAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCGGGCTCTGCAGGCCCTaGCCCTCCTGTCAATCCAGG +
Preference number: 4 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCGLCRP*PSCQSR
Trigger: CCTGGATTGACAGGAGGGGCAGGGCCTGCAGAGCCC...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCGGGCTCTGCAGGCCCTaGCCCTCCTGTCAATCCAGG +
Preference number: 4 (lower is better)
Translates to: APVASHPCHSALAAPSGTGLCRP*PSCQSR
Trigger: CCTGGATTGACAGGAGGGGCAGGGCCTGCAGAGCCC...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp ACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCAGGCCTCAGCAGTGCTaGCCCCACTGGGAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: TPGLHKYRRPWRLRLQAPRPQQC*PHWESP
Trigger: GGGGCTCTCCCAGTGGGGGCAGCACTGCTGAGGCCT...GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGGCCGCTGCTCTGAGATaGTCCGGAGTTCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: QWAGAAYTQQHSPLPTGKAAALR*SGVLPP
Trigger: TGGTGGCAGAACTCCGGAGCATCTCAGAGCAGCGGC...CTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCGGGCCCGGGTACCCGTaGACCGGCCAACAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: APVASHPCHSALAAPSGTGPGYP*TGQQRC
Trigger: ACACCTTTGTTGGCCGGTCCACGGGTACCCGGGCCC...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGGGGCCGGGTCAATGGTaGGGCCCGGGTACCCGTGGA +
Preference number: 4 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRGPGQW*GPGTRG
Trigger: TCCACGGGTACCCGGGCCCCACCATTGACCCGGCCC...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGCCGGCGGGGAGGGGGTaGAGGCCGCTTCAGCTTACG +
Preference number: 4 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRPAGRG*RPLQLT
Trigger: CGTAAGCTGAAGCGGCCTCCACCCCCTCCCCGCCGG...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCCAGCCTTGGTGAGGGGGCGGGGAGGTCATGTCAACCTCTCTCCTTGGTGGTGGGGTGGATGATAAGATaGGGGTGGGGAAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PSLGEGAGRSCQPLSLVVGWMIR*GWGRWG
Trigger: CCCCCACCTTCCCCACCCCCATCTTATCATCCACCC...CACCACCAAGGAGAGAGGTTGACATGACCTCCCCGCCCCCTCACCAAGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp ACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTGGGGCTGGCGGAGCTaGAGGAGGGTCTGGGCTACC +
Preference number: 4 (lower is better)
Translates to: TPGLHKYRRPWRLRLQAPWGWRS*RRVWAT
Trigger: GGTAGCCCAGACCCTCCTCCAGCTCCGCCAGCCCCA...GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCTGAAGGTGGGAGCCCCTCCTaGAGCACCCACGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SHPCHSALAAPSGTTCAEGGSPS*STHGAQ
Trigger: CTGCGCTCCGTGGGTGCTCCAGGAGGGGCTCCCACC...TTCAGCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGCGATGGCCCCAGTGCTaGGGTGGGAGCCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRRWPQC*GGSPSW
Trigger: CCAGGAGGGGCTCCCACCCCAGCACTGGGGCCATCG...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGGACTGGGGAGGCCGTaGCTCTGCCTCAGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: VLGAARVPEIVFLGWVSSGLGRP*LCLRRS
Trigger: GGACCGCCTGAGGCAGAGCCACGGCCTCCCCAGTCC...ACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTCGCTGGAGGTCAGCCTaGGTCTCAGGGGACACGGGC +
Preference number: 4 (lower is better)
Translates to: GAARVPEIVFLGWVSSASRWRSA*VSGDTG
Trigger: GCCCGTGTCCCCTGAGACCCAGGCTGACCTCCAGCG...ACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCACCCCAGCGAGCGGACTaGGGCTGGGCTGGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPPQRAD*GWAGRV
Trigger: CACTCGGCCAGCCCAGCCTCAGTCCGCTCGCTGGGG...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCCCAGTGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCCACTGCTCCGAATGCTaGGTGTGTCTGAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PQCGQGGKGQVLDTAKCPHCSEC*VCLRPQ
Trigger: CTGAGGCCTCAGACACACTCAGCATTCGGAGCAGTG...GGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACACTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTGCAGGAGCGAGGGCGTaGCCAGGGGCGCACCTACGT +
Preference number: 4 (lower is better)
Translates to: CVCCILSSLELLGSLRLCAGARA*PGAHLR
Trigger: ACGTAGGTGCGCCCCTGGTCACGCCCTCGCTCCTGC...ACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCTGGGGGAGCCTTAGGTaGCTTCTTTGGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: APVASHPCHSALAAPSGTWGSLR*LLWGLG
Trigger: CCCCAGGCCCCAAAGAAGTCACCTAAGGCTCCCCCA...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCCAAGGGGCAGGTGCTTaGCACTGCCAAGTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCQGAGA*HCQVPR
Trigger: TCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTG...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTCCGGGGCGTGCCTGGTaGCTCACGCTCATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GAARVPEIVFLGWVSSASPGRAW*LTLIPQ
Trigger: CTGAGGAATGAGCGTGAGGCACCAGGCACGCCCCGG...ACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGCGTACGGCATCCCGTaGACCAGGAGCCCGGGGCGT +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWAYGIP*TRSPGR
Trigger: ACGCCCCGGGCTCCTGGTGCACGGGATGCCGTACGC...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCCCCATCCCTGAGGTaGCTCGGGGGCGGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: LSIRLCLLYPLVLGAARVPPSLR*LGGGRP
Trigger: TGGACGGCCGCCCCCGAGGCACCTCAGGGATGGGGG...GACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCACCCCCATCCCTGAGGTaGCTCGGGGGCGGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPPPSLR*LGGGRP
Trigger: TGGACGGCCGCCCCCGAGGCACCTCAGGGATGGGGG...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCCGGGCTCAGGGGCTCTaGAGGCCCTGCCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LQDEAKAKTEAATARGEPRAQGL*RPCPSC
Trigger: ACAGGAGGGGCAGGGCCTGCAGAGCCCCTGAGCCCG...GGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGGGCTCAGGGGCTCTaGAGGCCCTGCCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHERAQGL*RPCPSC
Trigger: ACAGGAGGGGCAGGGCCTGCAGAGCCCCTGAGCCCG...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCGAGGCCCACCACCCTTaGTACAGCCCACCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCEAHHP*YSPPVP
Trigger: AGGAACCGGTGGGCTGTAGCAAGGGTGGTGGGCCTC...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGGGGAGGCCGTGGCTCTaGCTCAGGCGGTCCGTTGGG +
Preference number: 4 (lower is better)
Translates to: QAPSLLGCVCCILSSLELGRPWL*LRRSVG
Trigger: CCCAACGGACCGCCTGAGGCAGAGCCACGGCCTCCC...CAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCCAGCCTTGGTGAGGGGGCGGGGAGGTCATGTCAACCTCTCTCCTTGGTGGTGCCATTCCCAGGTTGCTaGCAGGGCCTGGTTTCATGC +
Preference number: 4 (lower is better)
Translates to: PSLGEGAGRSCQPLSLVVPFPGC*QGLVSC
Trigger: GCATGAAACCAGGCCCTGGCAGCAACCTGGGAATGG...CACCACCAAGGAGAGAGGTTGACATGACCTCCCCGCCCCCTCACCAAGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGCGAACCGCCAGAAGCTaGGGACCCGGGGACCGCTGG +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWRTARS*GPGDRW
Trigger: CCAGCGGTCCCCGGGTCCGCAGCTTCTGGCGGTTCG...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373481.7
CDS-3UTR CCA 90 bp GCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTGAGCCCGGGGCGTGCCTaGTGCCTCACGCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: ARVPEIVFLGWVSSASEVSPGRA*CLTLIP
Trigger: AGGAATGAGCGTGAGGCACCAGGCACGCCCCGGGCT...CACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGGGCGGCCGTCCACTGTaGGGATGCGTACGGCATCCC +
Preference number: 4 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRGGRPL*GCVRHP
Trigger: GGGATGCCGTACGCATCCCCACAGTGGACGGCCGCC...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGGGGCCGGGTCAATGGTaGGGCCCGGGTACCCGTGGA +
Preference number: 4 (lower is better)
Translates to: LQAPSLLGCVCCILSSLEGPGQW*GPGTRG
Trigger: TCCACGGGTACCCGGGCCCCACCATTGACCCGGCCC...CTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGACTCTAGGCTCCAGGTGTCACTaGAGGAGGATGGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: QGGKGQVLDTAKCPEMTLGSRCH*RRMGGG
Trigger: GCCGCCACCCATCCTCCTCCAGTGACACCTGGAGCC...TAGAGTCATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCACCGGCGGGGAGGGGGTaGAGGCCGCTTCAGCTTACG +
Preference number: 4 (lower is better)
Translates to: VNPFGKRHERRMTLRTGAPAGRG*RPLQLT
Trigger: CGTAAGCTGAAGCGGCCTCCACCCCCTCCCCGCCGG...TGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp ACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCGGTGGCCGAGGCAGCTaGGGCTGCTGCTTACGCTCA +
Preference number: 4 (lower is better)
Translates to: TPGLHKYRRPWRLRLQAPGGRGS*GCCLRS
Trigger: TGAGCGTAAGCAGCAGCCCCAGCTGCCTCGGCCACC...GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCAGCCACCAGTGGTGGGTaGCCGAGGCAGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KAKTEAATARGEPIREKAATSGG*PRQLGL
Trigger: CAGCCCCAGCTGCCTCGGCCACCCACCACTGGTGGC...TGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGGGAAGAACTTCTGAGCCACCAGTaGTGGGTGGCCGAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QVQRTPSSTLHCPQAREELLSHQ*WVAEAA
Trigger: AGCTGCCTCGGCCACCCACCACTGGTGGCTCAGAAG...TTCTTCCCTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGCTGGGCCTTGCCTaGGGAAGCAGGGGGACCTGC +
Preference number: 4 (lower is better)
Translates to: APSLLGCVCCILSSLELLGLGLA*GSRGTC
Trigger: GCAGGTCCCCCTGCTTCCCCAGGCAAGGCCCAGCCC...GAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCAGCTGGAGGAGGGTCTaGGCTACCCGGGGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: APVASHPCHSALAAPSGTSWRRV*ATRGLN
Trigger: ATTCAGCCCCCGGGTAGCCCAGACCCTCCTCCAGCT...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCCTTGGCCACATGCCCTaGGGCGGAACTAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCLGHMP*GGTSRS
Trigger: GCTCCTGCTAGTTCCGCCCCAGGGCATGTGGCCAAG...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAGGTGGGAGCCCCTCCTaGAGCACCCACGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: VNPFGKRHERRMTLRTGAGGSPS*STHGAQ
Trigger: CTGCGCTCCGTGGGTGCTCCAGGAGGGGCTCCCACC...TGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCGATGGCCCCAGTGCTaGGGTGGGAGCCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LQAPSLLGCVCCILSSLERWPQC*GGSPSW
Trigger: CCAGGAGGGGCTCCCACCCCAGCACTGGGGCCATCG...CTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTCGCTGGAGGTCAGCCTaGGTCTCAGGGGACACGGGC +
Preference number: 4 (lower is better)
Translates to: VLGAARVPEIVFLGWVSSRWRSA*VSGDTG
Trigger: GCCCGTGTCCCCTGAGACCCAGGCTGACCTCCAGCG...ACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTACTGGGGGAGGCGGGTaGGGGGACTCCCACAGACGG +
Preference number: 4 (lower is better)
Translates to: AGALSIRLCLLYPLVLGATGGGG*GDSHRR
Trigger: CCGTCTGTGGGAGTCCCCCCACCCGCCTCCCCCAGT...AGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGAACTGGGGGAGGCGGGTaGGGGGACTCCCACAGACGG +
Preference number: 4 (lower is better)
Translates to: LYPLVLGAARVPEIVFLGTGGGG*GDSHRR
Trigger: CCGTCTGTGGGAGTCCCCCCACCCGCCTCCCCCAGT...TCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCAACTGGGGGAGGCGGGTaGGGGGACTCCCACAGACGG +
Preference number: 4 (lower is better)
Translates to: KAKTEAATARGEPIREKATGGGG*GDSHRR
Trigger: CCGTCTGTGGGAGTCCCCCCACCCGCCTCCCCCAGT...TGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp ACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCGCAGCCACGCTGCTGTaGACCCACAGGGGCCAATGG +
Preference number: 4 (lower is better)
Translates to: TPGLHKYRRPWRLRLQAPAATLL*THRGQW
Trigger: CCATTGGCCCCTGTGGGTCCACAGCAGCGTGGCTGC...GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGACTCTAGCAGCCACGCTGCTGTaGACCCACAGGGGCCAATGG +
Preference number: 4 (lower is better)
Translates to: QGGKGQVLDTAKCPEMTLAATLL*THRGQW
Trigger: CCATTGGCCCCTGTGGGTCCACAGCAGCGTGGCTGC...TAGAGTCATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCTGAAGGTCAGCAGTGCCAGTaGGGTGCCTGGTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SHPCHSALAAPSGTTCAEGQQCQ*GAWWSG
Trigger: GCCTGACCACCAGGCACCTCACTGGCACTGCTGACC...TTCAGCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCCCGCCGACGCCGCCCTaGCTTTCCAGATTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: APVASHPCHSALAAPSGTPPTPP*LSRFGK
Trigger: TTTCCCAAATCTGGAAAGTCAGGGCGGCGTCGGCGG...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGACTGCTAAGCCCCGCTaGTGGAGGGAGTGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: GCVCCILSSLELLGSLRLTAKPR*WREWVR
Trigger: CCGGACCCACTCCCTCCATCAGCGGGGCTTAGCAGT...CAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCACCCTCTCCCGCCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAAAGCTCTGGGGAGCCTaGAGGGCCTGCAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PPSPASYPLQDEAKAKTEKLWGA*RACRLR
Trigger: CCTGAGCCTGCAGGCCCTTCAGGCTCCCCAGAGCTT...TTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGGCGGGAGAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGGGGCTACCCGGGGGCTaGATCTGCAAAGCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: CGQGGKGQVLDTAKCPEMGLPGG*ICKAVA
Trigger: AGCTACTGCTTTGCAGATTCAGCCCCCGGGTAGCCC...CATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCAGCAGGAGCGAGGGCGTaGCCAGGGGCGCACCTACGT +
Preference number: 4 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPAGARA*PGAHLR
Trigger: ACGTAGGTGCGCCCCTGGTCACGCCCTCGCTCCTGC...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAACACCAGGCGGGTGGCCGCTGCTCTaGGATGCTCCGGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FGKRHERRMTLRTGATPGGWPLL*DAPEFC
Trigger: GCAGAACTCCGGAGCATCTCAGAGCAGCGGCCACCC...GCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGCTGGTGCTCATCCACTaGAGACCCTGGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: DEAKAKTEAATARGEPIRLVLIH*RPWPLA
Trigger: GGCCAGGGGCCAGGGTCTGCAGTGGATGAGCACCAG...CCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCCATTTCTTTGGGCCCTGGCAGTCTCCTACTTGTCCCCAGCATGGAGCACCTGGGAGAGCGCGTCCTCTaGTGTGGAGCTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PISLGPGSLLLVPSMEHLGERVL*CGALSH
Trigger: GTGGCTGAGAGCTCCACAGCAGAGGACGCGCTCTCC...CAGGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGGCTGGGCTGGCCGAGTaGAGGCTGCAGCGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRAGLAE*RLQRLS
Trigger: ACTAAGCCGCTGCAGCCTGCACTCGGCCAGCCCAGC...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGGCTGGGCTGGCCGAGTaGAGGCTGCAGCGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: GCVCCILSSLELLGSLRLAGLAE*RLQRLS
Trigger: ACTAAGCCGCTGCAGCCTGCACTCGGCCAGCCCAGC...CAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAAGGCCTCAGCAGTGCTaGCCCCACTGGGAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: VNPFGKRHERRMTLRTGARPQQC*PHWESP
Trigger: GGGGCTCTCCCAGTGGGGGCAGCACTGCTGAGGCCT...TGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGCTGAGGCCTCAGCAGTaGTGCCCCCACTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GCVCCILSSLELLGSLRLLRPQQ*CPHWES
Trigger: GCTCTCCCAGTGGGGGCAGCACTGCTGAGGCCTCAG...CAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCCGCAGCCGCACCATCTaGAGGAGCGAGGGCGTGACC +
Preference number: 4 (lower is better)
Translates to: APSLLGCVCCILSSLELLRSRTI*RSEGVT
Trigger: GGTCACGCCCTCGCTCCTGCAGATGGTGCGGCTGCG...GAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGACTCTAACGGGCCGCTCCAGCTaGAGCTTCCTAGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: QGGKGQVLDTAKCPEMTLTGRSS*SFLEPL
Trigger: CAAGGGCTCTAGGAAGCTGCAGCTGGAGCGGCCCGT...TAGAGTCATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTCCCACAGACGGCTTaGGGGCCACAGGTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LQAPSLLGCVCCILSSLELPQTA*GPQVGE
Trigger: CTCCCCCACCTGTGGCCCGCAAGCCGTCTGTGGGAG...CTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCTCCTGCCTCTGAAGTaGTGGGGGCCCACCCACCCC +
Preference number: 4 (lower is better)
Translates to: AVEVKAAGALSIRLCLLYLLPLK*WGPTHP
Trigger: GGGGTGGGTGGGCCCCCAGCACTTCAGAGGCAGGAG...ATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCAACTCAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAATGGGGAAGCCAGCTTaGCTAGACAGGTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: PTQWAGAAYTQQHSPLPTMGKPA*LDRWHR
Trigger: CCTGTGCCACCTGTCTAGGCAAGCTGGCTTCCCCAT...TGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCAACTCAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACACCATTCCCAGGTTGCTaGCAGGGCCTGGTTTCATGC +
Preference number: 4 (lower is better)
Translates to: PTQWAGAAYTQQHSPLPTPFPGC*QGLVSC
Trigger: GCATGAAACCAGGCCCTGGCAGCAACCTGGGAATGG...TGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCCATTTCTTTGGGCCCTGGCAGTCTCCTACTTGTCCCCAGCATGGAGCACCTGGCGCGTCCTCTGCTGTaGAGCTCTCAGCCACGTAGG +
Preference number: 4 (lower is better)
Translates to: PISLGPGSLLLVPSMEHLARPLL*SSQPRR
Trigger: CCTACGTGGCTGAGAGCTCCACAGCAGAGGACGCGC...CAGGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAACACCAGGCAGCCCGGGGCGTGCCTaGTGCCTCACGCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: FGKRHERRMTLRTGATPGSPGRA*CLTLIP
Trigger: AGGAATGAGCGTGAGGCACCAGGCACGCCCCGGGCT...GCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGGCGGCCGTCCACTGTaGGGATGCGTACGGCATCCC +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWGGRPL*GCVRHP
Trigger: GGGATGCCGTACGCATCCCCACAGTGGACGGCCGCC...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGGGCCGGGTCAATGGTaGGGCCCGGGTACCCGTGGA +
Preference number: 4 (lower is better)
Translates to: YPLQDEAKAKTEAATARGGPGQW*GPGTRG
Trigger: TCCACGGGTACCCGGGCCCCACCATTGACCCGGCCC...ACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGCATGGGCCGGGTCAATaGTGGGGCCCGGGTACCCGT +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWHGPGQ*WGPGTR
Trigger: ACGGGTACCCGGGCCCCACCATTGACCCGGCCCATG...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTCATGGGCCGGGTCAATaGTGGGGCCCGGGTACCCGT +
Preference number: 4 (lower is better)
Translates to: AGALSIRLCLLYPLVLGAHGPGQ*WGPGTR
Trigger: ACGGGTACCCGGGCCCCACCATTGACCCGGCCCATG...AGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTGGCACTGCTAGGGACATaGGCCGGGTCAATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ARVPEIVFLGWVSSASEVALLGT*AGSMVG
Trigger: CCCCACCATTGACCCGGCCCATGTCCCTAGCAGTGC...CACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGTCACTGGAGGAGGATaGGTGGCGGCTGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPVTGGG*VAAAGL
Trigger: CAGCCCCGCAGCCGCCACCCATCCTCCTCCAGTGAC...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGCTCCCACTGCCTCCCTaGGGAGGGGGTACCACGCTA +
Preference number: 4 (lower is better)
Translates to: DEAKAKTEAATARGEPIRLPLPP*GGGTTL
Trigger: TAGCGTGGTACCCCCTCCCCAGGGAGGCAGTGGGAG...CCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGGTTGGCTGGGTTGGGTaGACAGGGTGCTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: LLGCVCCILSSLELLGSLVGWVG*TGCCPR
Trigger: GCGGGGGCAGCACCCTGTCCACCCAACCCAGCCAAC...CAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCTACCCAGCTGTTGGCTaGGTTGGGTGGACAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCYPAVG*VGWTGC
Trigger: GCACCCTGTCCACCCAACCCAGCCAACAGCTGGGTA...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCCAGGTACCCAGCTGTTaGCTGGGTTGGGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCQVPSC*LGWVDR
Trigger: CCTGTCCACCCAACCCAGCCAACAGCTGGGTACCTG...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCCATTTCTTTGGGCCCTGGCAGTCTCCTACTTGTCCCCAGCATGGAGCACCTGAGCTGGAGGAGGGTCTaGGCTACCCGGGGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: PISLGPGSLLLVPSMEHLSWRRV*ATRGLN
Trigger: ATTCAGCCCCCGGGTAGCCCAGACCCTCCTCCAGCT...CAGGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGGGGCTGGCGGAGCTaGAGGAGGGTCTGGGCTACC +
Preference number: 4 (lower is better)
Translates to: YRRPWRLRLQAPSLLGCVWGWRS*RRVWAT
Trigger: GGTAGCCCAGACCCTCCTCCAGCTCCGCCAGCCCCA...GACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGGGAGCCCCTCCTaGAGCACCCACGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SYPLQDEAKAKTEAATARGGSPS*STHGAQ
Trigger: CTGCGCTCCGTGGGTGCTCCAGGAGGGGCTCCCACC...TCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp ACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCCTTCGCAGTGGTTTCTaGGGGGCCGATGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: TPGLHKYRRPWRLRLQAPLRSGF*GADGPS
Trigger: ACTGGGGCCATCGGCCCCCCAGAAACCACTGCGAAG...GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTAGTCGGACCGCAGCATaGAGCCCTGAGGAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: VLGAARVPEIVFLGWVSSSRTAA*SPEEGA
Trigger: TGCCCCCTCCTCAGGGCTCCATGCTGCGGTCCGACT...ACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGGACTGGGGAGGCCGTaGCTCTGCCTCAGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: KYRRPWRLRLQAPSLLGCGLGRP*LCLRRS
Trigger: GGACCGCCTGAGGCAGAGCCACGGCCTCCCCAGTCC...ACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCCGCTGGAGGTCAGCCTaGGTCTCAGGGGACACGGGC +
Preference number: 4 (lower is better)
Translates to: APSLLGCVCCILSSLELLRWRSA*VSGDTG
Trigger: GCCCGTGTCCCCTGAGACCCAGGCTGACCTCCAGCG...GAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCAACTCAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACACTGGGCCCTGGAGGATaGCCATGCAGCCACTTTTCA +
Preference number: 4 (lower is better)
Translates to: PTQWAGAAYTQQHSPLPTLGPGG*PCSHFS
Trigger: TGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAG...TGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCACTGGTCCCAAGCTATaGGCTGACTGCCGGGGATGG +
Preference number: 4 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCTGPKL*ADCRGW
Trigger: CCATCCCCGGCAGTCAGCCCATAGCTTGGGACCAGT...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTCCACCCACCCCAGTGTaGTCAAGGAGGCAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GAARVPEIVFLGWVSSASPPTPV*SRRQGA
Trigger: TGCCCCTTGCCTCCTTGACCACACTGGGGTGGGTGG...ACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp ACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCCCACCCACCCCAGTGTaGTCAAGGAGGCAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TPGLHKYRRPWRLRLQAPPPTPV*SRRQGA
Trigger: TGCCCCTTGCCTCCTTGACCACACTGGGGTGGGTGG...GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCGCCCGGAGAAAAGTTTaGGCGGCGGAGGCCGAGCGG +
Preference number: 4 (lower is better)
Translates to: LQDEAKAKTEAATARGEPARRKV*AAEAER
Trigger: CCGCTCGGCCTCCGCCGCCCAAACTTTTCTCCGGGC...GGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS-3UTR TCA 90 bp ATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGGGTCAGCAGTGCCAGTaGGGTGCCTGGTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: IRLCLLYPLVLGAARVPEGQQCQ*GAWWSG
Trigger: GCCTGACCACCAGGCACCTCACTGGCACTGCTGACC...CTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCGGCAACTGCCAGAGGTaGACCCATTCGGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCGNCQR*THSGKG
Trigger: GCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCC...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCAATGCTGAGTGTGTCTaGGGCCTCAGCAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: APVASHPCHSALAAPSGTNAECV*GLSSAA
Trigger: GGCAGCACTGCTGAGGCCTCAGACACACTCAGCATT...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAACTGCTAAGCCCCGCTaGTGGAGGGAGTGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPTAKPR*WREWVR
Trigger: CCGGACCCACTCCCTCCATCAGCGGGGCTTAGCAGT...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGAAAGCTCTGGGGAGCCTaGAGGGCCTGCAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LYPLVLGAARVPEIVFLGKLWGA*RACRLR
Trigger: CCTGAGCCTGCAGGCCCTTCAGGCTCCCCAGAGCTT...TCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCAAGCTCTGGGGAGCCTaGAGGGCCTGCAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LQDEAKAKTEAATARGEPKLWGA*RACRLR
Trigger: CCTGAGCCTGCAGGCCCTTCAGGCTCCCCAGAGCTT...GGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCCAGGCTGCAGGCCTTaGGTCGGACCGCAGCATGGA +
Preference number: 4 (lower is better)
Translates to: QAPSLLGCVCCILSSLELPGCRP*VGPQHG
Trigger: TCCATGCTGCGGTCCGACTCAAGGCCTGCAGCCTGG...CAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGCCAGGCTGCAGGCCTTaGGTCGGACCGCAGCATGGA +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWPGCRP*VGPQHG
Trigger: TCCATGCTGCGGTCCGACTCAAGGCCTGCAGCCTGG...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp ATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGGGGTGGCCGCTGCTCTaGGATGCTCCGGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: IRLCLLYPLVLGAARVPEGWPLL*DAPEFC
Trigger: GCAGAACTCCGGAGCATCTCAGAGCAGCGGCCACCC...CTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCGGGTGGTTGGTGAGTTaGGGCACAGGAAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: APVASHPCHSALAAPSGTGWLVS*GTGRPI
Trigger: GATTGGCCTTCCTGTGCCTCAACTCACCAACCACCC...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCGGGTGGTTGGTGAGTTaGGGCACAGGAAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCGWLVS*GTGRPI
Trigger: GATTGGCCTTCCTGTGCCTCAACTCACCAACCACCC...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCCATTTCTTTGGGCCCTGGCAGTCTCCTACTTGTCCCCAGCATGGAGCACCTGGAACACCACCATGACTaGGGGCGCCACTCGAGACGT +
Preference number: 4 (lower is better)
Translates to: PISLGPGSLLLVPSMEHLEHHHD*GRHSRR
Trigger: ACGTCTCGAGTGGCGCCCGCAGTCATGGTGGTGTTC...CAGGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373480.1
CDS-3UTR GCA 90 bp GATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGCAGTGCCAGTGAGGTaGCTGGTGGTCAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: DEAKAKTEAATARGEPIRAVPVR*LVVRPA
Trigger: AGCTGGCCTGACCACCAGGCACCTCACTGGCACTGC...CCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTGCCTGGTGGCAGTGCCAGTGAGGTaGCTGGTGGTCAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLRLCFWDGSAVPVRCLVAVPVR*LVVRPA
Trigger: AGCTGGCCTGACCACCAGGCACCTCACTGGCACTGC...CACCAGGCACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCACCGGGGCGTGCCTGGTaGCTCACGCTCATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPPGRAW*LTLIPQ
Trigger: CTGAGGAATGAGCGTGAGGCACCAGGCACGCCCCGG...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGACAGGAGCCCGGGGCGTaGCTGGTGCCTCACGCTCAT +
Preference number: 4 (lower is better)
Translates to: SYPLQDEAKAKTEAATARQEPGA*LVPHAH
Trigger: ATGAGCGTGAGGCACCAGGCACGCCCCGGGCTCCTG...TCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTCAGGAGCCCGGGGCGTaGCTGGTGCCTCACGCTCAT +
Preference number: 4 (lower is better)
Translates to: CNFLGPGGWPCSHFSKVLQEPGA*LVPHAH
Trigger: ATGAGCGTGAGGCACCAGGCACGCCCCGGGCTCCTG...AAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCACCCTCTCCCGCCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAATGGCCGAGTGCAGGCTaGAGCGGCTTAGTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: PPSPASYPLQDEAKAKTEWPSAG*SGLVCA
Trigger: TGCGCACACTAAGCCGCTGCAGCCTGCACTCGGCCA...TTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGGCGGGAGAGGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp ATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGGCTGGGCTGGCCGAGTaGAGGCTGCAGCGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: IRLCLLYPLVLGAARVPEAGLAE*RLQRLS
Trigger: ACTAAGCCGCTGCAGCCTGCACTCGGCCAGCCCAGC...CTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATCTGAGGCCTCAGCAGTaGTGCCCCCACTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RPRLKRQLPEVNPFGKRHLRPQQ*CPHWES
Trigger: GCTCTCCCAGTGGGGGCAGCACTGCTGAGGCCTCAG...ATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCACTGAGGCCTCAGCAGTaGTGCCCCCACTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPLRPQQ*CPHWES
Trigger: GCTCTCCCAGTGGGGGCAGCACTGCTGAGGCCTCAG...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTCTCCGGCCAGACAACTaGCCACTGCTCCGAATGCTG +
Preference number: 4 (lower is better)
Translates to: GAARVPEIVFLGWVSSASLRPDN*PLLRML
Trigger: CAGCATTCGGAGCAGTGGGCAGTTGTCTGGCCGGAG...ACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGGGCAGCTGGGGCTGCTaGTTACGCTCAGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: GCVCCILSSLELLGSLRLGSWGC*LRSGLG
Trigger: CCCTAAGCCTGAGCGTAAGCAGCAGCCCCAGCTGCC...CAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TGCTGCCATGTAAACAGGCCCTTGGAATGCAACTTCCTGGGCCCTGGAGGATGGACGGGCCGCTCCAGCTaGAGCTTCCTAGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: CCHVNRPLECNFLGPGGWTGRSS*SFLEPL
Trigger: CAAGGGCTCTAGGAAGCTGCAGCTGGAGCGGCCCGT...CCATCCTCCAGGGCCCAGGAAGTTGCATTCCAAGGGCCTGTTTACATGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGGAGGCAAGGGGCAGGTaGTTGACACTGCCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: ELLGSLRLCFWDGSAVPVEARGR*LTLPSA
Trigger: GGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTC...CACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTCTCCTGCCTCTGAAGTaGTGGGGGCCCACCCACCCC +
Preference number: 4 (lower is better)
Translates to: SIRLCLLYPLVLGAARVPLLPLK*WGPTHP
Trigger: GGGGTGGGTGGGCCCCCAGCACTTCAGAGGCAGGAG...AGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGACTCCTGCCTCTGAAGTaGTGGGGGCCCACCCACCCC +
Preference number: 4 (lower is better)
Translates to: SYPLQDEAKAKTEAATARLLPLK*WGPTHP
Trigger: GGGGTGGGTGGGCCCCCAGCACTTCAGAGGCAGGAG...TCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGAACTCAGTGGGCAGGTaGAGCGTACACCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CGQGGKGQVLDTAKCPEMNSVGR*SVHPAA
Trigger: TGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTT...CATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCCAGCCATTCCCAGGTTaGTGCCAGGGCCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: APVASHPCHSALAAPSGTQPFPG*CQGLVS
Trigger: TGAAACCAGGCCCTGGCAGCAACCTGGGAATGGCTG...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TTGGAATGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTTCCCCATTGCGGGTaGGGGAGCCGGCGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: LECNFLGPGGWPCSHFSKVPHCG*GSRRGN
Trigger: GTTCCCGCGCCGGCTCCCGCACCCGCAATGGGGAAC...TTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCATTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373481.7
CDS-3UTR CCA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGGCGCGTCCTCTGCTGTaGAGCTCTCAGCCACGTAGG +
Preference number: 4 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRARPLL*SSQPRR
Trigger: CCTACGTGGCTGAGAGCTCCACAGCAGAGGACGCGC...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp ACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCATCTCCGAGCGGATaGAGAGCGCGTCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TPGLHKYRRPWRLRLQAPSSPSG*RARPLL
Trigger: CAGCAGAGGACGCGCTCTCCATCCGCTCGGAGATGA...GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCCCAGTGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCTTGGGAAATGAGTCATaGGGTCGGAAGGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PQCGQGGKGQVLDTAKCPLGNES*GRKVEP
Trigger: AGGCTCCACCTTCCGACCCCATGACTCATTTCCCAA...GGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGGGCCCGGGTACCCGTaGACCGGCCAACAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWGPGYP*TGQQRC
Trigger: ACACCTTTGTTGGCCGGTCCACGGGTACCCGGGCCC...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAACACCAGGCGCACTGCTAGGGACATaGGCCGGGTCAATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FGKRHERRMTLRTGATPGALLGT*AGSMVG
Trigger: CCCCACCATTGACCCGGCCCATGTCCCTAGCAGTGC...GCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTTGCGGGGCTGTGGGCTaGAGACGGAGGAGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: KYRRPWRLRLQAPSLLGCCGAVG*RRRRSA
Trigger: GGCGCTTCTCCTCCGTCTCCAGCCCACAGCCCCGCA...ACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCAGTCACTGGAGGAGGATaGGTGGCGGCTGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPVTGGG*VAAAGL
Trigger: CAGCCCCGCAGCCGCCACCCATCCTCCTCCAGTGAC...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGTCACTGGAGGAGGATaGGTGGCGGCTGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: YPLQDEAKAKTEAATARGVTGGG*VAAAGL
Trigger: CAGCCCCGCAGCCGCCACCCATCCTCCTCCAGTGAC...ACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGGGCTCCAGGTGTCACTaGAGGAGGATGGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LLGCVCCILSSLELLGSLGSRCH*RRMGGG
Trigger: GCCGCCACCCATCCTCCTCCAGTGACACCTGGAGCC...CAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCACTCCCACTGCCTCCCTaGGGAGGGGGTACCACGCTA +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPLPLPP*GGGTTL
Trigger: TAGCGTGGTACCCCCTCCCCAGGGAGGCAGTGGGAG...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGCTTCTGAGCCACCAGTaGTGGGTGGCCGAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: DEAKAKTEAATARGEPIRLLSHQ*WVAEAA
Trigger: AGCTGCCTCGGCCACCCACCACTGGTGGCTCAGAAG...CCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGGTGGGAGTACCACTTTaGCTCGAGTATCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: QWAGAAYTQQHSPLPTGKVGVPL*LEYPLE
Trigger: CTCCAGTGGATACTCGAGCCAAAGTGGTACTCCCAC...CTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCCCAGTGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGTGGGAGTACCACTTTaGCTCGAGTATCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: PQCGQGGKGQVLDTAKCPVGVPL*LEYPLE
Trigger: CTCCAGTGGATACTCGAGCCAAAGTGGTACTCCCAC...GGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCCATTTCTTTGGGCCCTGGCAGTCTCCTACTTGTCCCCAGCATGGAGCACCTGTCTGGTTTAGGGGGCTaGGCCTTGCCTGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PISLGPGSLLLVPSMEHLSGLGG*ALPGEA
Trigger: TGCTTCCCCAGGCAAGGCCCAGCCCCCTAAACCAGA...CAGGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGACTCTAGGCCAGTTGGGATCTTaGAGGGGCTCCTCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: QGGKGQVLDTAKCPEMTLGQLGS*RGSSAV
Trigger: GACTGCTGAGGAGCCCCTCCAAGATCCCAACTGGCC...TAGAGTCATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGGGGGAAGTCAGCCATaGACAGGTCCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GAARVPEIVFLGWVSSASGGSQP*TGPAPQ
Trigger: CTGAGGAGCAGGACCTGTCCATGGCTGACTTCCCCC...ACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCTGGGGCTGGCGGAGCTaGAGGAGGGTCTGGGCTACC +
Preference number: 4 (lower is better)
Translates to: VKAAGALSIRLCLLYPLVWGWRS*RRVWAT
Trigger: GGTAGCCCAGACCCTCCTCCAGCTCCGCCAGCCCCA...GACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGGGAACTAGCAGGAGCTaGGGCTGGCGGAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLGCVCCILSSLELLGSLGTSRS*GWRSWR
Trigger: CCTCCAGCTCCGCCAGCCCCAGCTCCTGCTAGTTCC...CAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGGAACTAGCAGGAGCTaGGGCTGGCGGAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWGTSRS*GWRSWR
Trigger: CCTCCAGCTCCGCCAGCCCCAGCTCCTGCTAGTTCC...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGCCTTCTGAGGGAGCTTaGCCACATGCCCTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWPSEGA*PHALGR
Trigger: CCGCCCCAGGGCATGTGGCCAAGCTCCCTCAGAAGG...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGACCTTCTGAGGGAGCTTaGCCACATGCCCTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LYPLVLGAARVPEIVFLGPSEGA*PHALGR
Trigger: CCGCCCCAGGGCATGTGGCCAAGCTCCCTCAGAAGG...TCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCCTTCTGAGGGAGCTTaGCCACATGCCCTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHEPSEGA*PHALGR
Trigger: CCGCCCCAGGGCATGTGGCCAAGCTCCCTCAGAAGG...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCCACCTACGTCCTCCCTaGGAGGCCCACCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: APSLLGCVCCILSSLELLHLRPP*EAHHPC
Trigger: GCAAGGGTGGTGGGCCTCCCAGGGAGGACGTAGGTG...GAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGCACCTACGTCCTCCCTaGGAGGCCCACCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWHLRPP*EAHHPC
Trigger: GCAAGGGTGGTGGGCCTCCCAGGGAGGACGTAGGTG...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGCTTCGCAGTGGTTTCTaGGGGGCCGATGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRLRSGF*GADGPS
Trigger: ACTGGGGCCATCGGCCCCCCAGAAACCACTGCGAAG...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGTCGGACCGCAGCATaGAGCCCTGAGGAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LLGCVCCILSSLELLGSLSRTAA*SPEEGA
Trigger: TGCCCCCTCCTCAGGGCTCCATGCTGCGGTCCGACT...CAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGCCTCAGGCGGTCCGTTaGGCTGAGCACTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GCVCCILSSLELLGSLRLPQAVR*AEHLRG
Trigger: GCCTCTCAAGTGCTCAGCCCAACGGACCGCCTGAGG...CAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGCCTCAGGCGGTCCGTTaGGCTGAGCACTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: DEAKAKTEAATARGEPIRPQAVR*AEHLRG
Trigger: GCCTCTCAAGTGCTCAGCCCAACGGACCGCCTGAGG...CCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCAGCAGCCACGCTGCTGTaGACCCACAGGGGCCAATGG +
Preference number: 4 (lower is better)
Translates to: KAKTEAATARGEPIREKAAATLL*THRGQW
Trigger: CCATTGGCCCCTGTGGGTCCACAGCAGCGTGGCTGC...TGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCCATTTCTTTGGGCCCTGGCAGTCTCCTACTTGTCCCCAGCATGGAGCACCTGTGTCATTCTCAGCCTTaGCAGAGCCTGCCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PISLGPGSLLLVPSMEHLCHSQP*QSLPAA
Trigger: AGCGGCCGGCAGGCTCTGCCAAGGCTGAGAATGACA...CAGGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373481.7
CDS-3UTR TCA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCAACTGCTAAGCCCCGCTaGTGGAGGGAGTGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPTAKPR*WREWVR
Trigger: CCGGACCCACTCCCTCCATCAGCGGGGCTTAGCAGT...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCAACTCAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAAGGAACATAAAGACGTaGGGGAAGAGGAGACGGAGG +
Preference number: 4 (lower is better)
Translates to: PTQWAGAAYTQQHSPLPTRNIKT*GKRRRR
Trigger: CCTCCGTCTCCTCTTCCCTCACGTCTTTATGTTCCT...TGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGGCAGGCACCTTGGGGTaGGGAGGTATGACAAACCTG +
Preference number: 4 (lower is better)
Translates to: ELLGSLRLCFWDGSAVPVAGTLG*GGMTNL
Trigger: CAGGTTTGTCATACCTCCTCACCCCAAGGTGCCTGC...CACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp ACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCGCAGGCACCTTGGGGTaGGGAGGTATGACAAACCTG +
Preference number: 4 (lower is better)
Translates to: TPGLHKYRRPWRLRLQAPAGTLG*GGMTNL
Trigger: CAGGTTTGTCATACCTCCTCACCCCAAGGTGCCTGC...GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGGTTGGGCTGAGCACTTaGGAGGCCTTCACTGGCGGC +
Preference number: 4 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHEVGLST*EAFTGG
Trigger: GCCGCCAGTGAAGGCCTCTCAAGTGCTCAGCCCAAC...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp AAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCAGTTGGGCTGAGCACTTaGGAGGCCTTCACTGGCGGC +
Preference number: 4 (lower is better)
Translates to: KAKTEAATARGEPIREKAVGLST*EAFTGG
Trigger: GCCGCCAGTGAAGGCCTCTCAAGTGCTCAGCCCAAC...TGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp ATGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTGGGTGGCCGCTGCTCTaGGATGCTCCGGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: MQLPGPWRMAMQPLFKSAGWPLL*DAPEFC
Trigger: GCAGAACTCCGGAGCATCTCAGAGCAGCGGCCACCC...AGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGGGGGAGCCTTAGGTaGCTTCTTTGGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: YRRPWRLRLQAPSLLGCVWGSLR*LLWGLG
Trigger: CCCCAGGCCCCAAAGAAGTCACCTAAGGCTCCCCCA...GACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTTCCCAAGCTATGGGCTaGCTGCCGGGGATGGATTCT +
Preference number: 4 (lower is better)
Translates to: GAARVPEIVFLGWVSSASSQAMG*LPGMDS
Trigger: AGAATCCATCCCCGGCAGTCAGCCCATAGCTTGGGA...ACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACACAAGGGGCAGGTGCTTaGCACTGCCAAGTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: PEVNPFGKRHERRMTLRTQGAGA*HCQVPR
Trigger: TCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTG...TGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAACACCAGGCGAACACCACCATGACTaGGGGCGCCACTCGAGACGT +
Preference number: 4 (lower is better)
Translates to: FGKRHERRMTLRTGATPGEHHHD*GRHSRR
Trigger: ACGTCTCGAGTGGCGCCCGCAGTCATGGTGGTGTTC...GCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294521.7
ENST00000373480.1
CDS-3UTR GCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGGAGAGCGCGTCCTCTaGTGTGGAGCTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPGERVL*CGALSH
Trigger: GTGGCTGAGAGCTCCACAGCAGAGGACGCGCTCTCC...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGCAGTGCCAGTGAGGTaGCTGGTGGTCAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: APSLLGCVCCILSSLELLAVPVR*LVVRPA
Trigger: AGCTGGCCTGACCACCAGGCACCTCACTGGCACTGC...GAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCAGCAGTGCCAGTGAGGTaGCTGGTGGTCAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: KAKTEAATARGEPIREKAAVPVR*LVVRPA
Trigger: AGCTGGCCTGACCACCAGGCACCTCACTGGCACTGC...TGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTAGGCCAAGCTCCTTCTaGACATGCTGCGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: VLGAARVPEIVFLGWVSSRPSSF*TCCGSP
Trigger: GGGACTCCCGCAGCATGTGCAGAAGGAGCTTGGCCT...ACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCGTCCACTGTGGGGATaGGTACGGCATCCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: QAPSLLGCVCCILSSLELRPLWG*VRHPVH
Trigger: GTGCACGGGATGCCGTACGCATCCCCACAGTGGACG...CAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGCGTCCACTGTGGGGATaGGTACGGCATCCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: ATHFKMRLRPRLKRQLPERPLWG*VRHPVH
Trigger: GTGCACGGGATGCCGTACGCATCCCCACAGTGGACG...CTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCACGTCCACTGTGGGGATaGGTACGGCATCCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: VNPFGKRHERRMTLRTGARPLWG*VRHPVH
Trigger: GTGCACGGGATGCCGTACGCATCCCCACAGTGGACG...TGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTGCGGTCAATGTGGCGCTaGAGCATGGCCTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: ARVPEIVFLGWVSSASEVRSMWR*SMASVS
Trigger: TGAGACAGAGGCCATGCTGCAGCGCCACATTGACCG...CACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp ATGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTGGGCTCTGCAGGCCCTaGCCCTCCTGTCAATCCAGG +
Preference number: 4 (lower is better)
Translates to: MQLPGPWRMAMQPLFKSAGLCRP*PSCQSR
Trigger: CCTGGATTGACAGGAGGGGCAGGGCCTGCAGAGCCC...AGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCATTAGTGTGCGCAGGCTaGAGCGGCCTAGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: VNPFGKRHERRMTLRTGALVCAG*SGLGPP
Trigger: TGGTGGCCCTAGGCCGCTGCAGCCTGCGCACACTAA...TGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGTGCAGCGGCTTAGTGTaGGCAGGCTGCAGCGGCCTA +
Preference number: 4 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHECSGLV*AGCSGL
Trigger: TAGGCCGCTGCAGCCTGCGCACACTAAGCCGCTGCA...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATTGGCCGAGTGCAGGCTaGAGCGGCTTAGTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: RPRLKRQLPEVNPFGKRHWPSAG*SGLVCA
Trigger: TGCGCACACTAAGCCGCTGCAGCCTGCACTCGGCCA...ATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGTGGCCGAGTGCAGGCTaGAGCGGCTTAGTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHEWPSAG*SGLVCA
Trigger: TGCGCACACTAAGCCGCTGCAGCCTGCACTCGGCCA...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGGGCAGCTGGGGCTGCTaGTTACGCTCAGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: QAPSLLGCVCCILSSLELGSWGC*LRSGLG
Trigger: CCCTAAGCCTGAGCGTAAGCAGCAGCCCCAGCTGCC...CAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGGGCAGCTGGGGCTGCTaGTTACGCTCAGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHEGSWGC*LRSGLG
Trigger: CCCTAAGCCTGAGCGTAAGCAGCAGCCCCAGCTGCC...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTGCCTGGTGCGAGGCAGCTGGGGCTaGTGCTTACGCTCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: SLRLCFWDGSAVPVRCLVRGSWG*CLRSGL
Trigger: TAAGCCTGAGCGTAAGCAGCAGCCCCAGCTGCCTCG...CACCAGGCACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGGATGCTCCGGAGTTCTaGCACCAGATTCCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ELLGSLRLCFWDGSAVPVDAPEF*HQIPLE
Trigger: CTCCAGCGGAATCTGGTGGCAGAACTCCGGAGCATC...CACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TTGGAATGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAACTCCCACAGACGGCTTaGGGGCCACAGGTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LECNFLGPGGWPCSHFSKLPQTA*GPQVGE
Trigger: CTCCCCCACCTGTGGCCCGCAAGCCGTCTGTGGGAG...TTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCATTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTTCAGGTGAGGTGTCCTaGTCCCAACTCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GAARVPEIVFLGWVSSASSGEVS*SQLCSL
Trigger: GAGGCTGCAGAGTTGGGAGCAGGACACCTCACCTGA...ACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTGTCAGGTGAGGTGTCCTaGTCCCAACTCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ARVPEIVFLGWVSSASEVSGEVS*SQLCSL
Trigger: GAGGCTGCAGAGTTGGGAGCAGGACACCTCACCTGA...CACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp ACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCGCCGGGGATGGATTCTaGTGCCATGTAAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: TPGLHKYRRPWRLRLQAPAGDGF*CHVNRP
Trigger: GGGCCTGTTTACATGGCAGCAGAATCCATCCCCGGC...GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGGCTGCAGAAAGGACATaGACCGAAATGAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QWAGAAYTQQHSPLPTGKAAERT*TEMRRE
Trigger: CTCTCTCCTCATTTCGGTGCATGTCCTTTCTGCAGC...CTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp ACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCACTCAGCGTTAGCTaGCCCCAGTGGAACCACCTG +
Preference number: 4 (lower is better)
Translates to: TPGLHKYRRPWRLRLQAPSLSVS*PQWNHL
Trigger: CAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGA...GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCGACCACCACCCAGCCTaGCCTAGAAGCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LQDEAKAKTEAATARGEPDHHPA*PRSTGC
Trigger: GCACCCAGTGCTTCTAGGGCAGGCTGGGTGGTGGTC...GGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGACCACCACCCAGCCTaGCCTAGAAGCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: ATHFKMRLRPRLKRQLPEDHHPA*PRSTGC
Trigger: GCACCCAGTGCTTCTAGGGCAGGCTGGGTGGTGGTC...CTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGACCACCACCCAGCCTaGCCTAGAAGCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWDHHPA*PRSTGC
Trigger: GCACCCAGTGCTTCTAGGGCAGGCTGGGTGGTGGTC...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGACTCTAAACTCAGTGGGCAGGTaGAGCGTACACCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QGGKGQVLDTAKCPEMTLNSVGR*SVHPAA
Trigger: TGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTT...TAGAGTCATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp ATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGCAGAGCCTCGGCCTTTaGCCTTGGCCCTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: IRLCLLYPLVLGAARVPEQSLGL*PWPSWP
Trigger: AGGCCAAGAGGGCCAAGGGCAAAGGCCGAGGCTCTG...CTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS-3UTR CCA 90 bp AGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGCAGACCCTGGCCCCTaGCCAGGCCCTACACTTAGA +
Preference number: 4 (lower is better)
Translates to: RPRLKRQLPEVNPFGKRHADPGP*PGPTLR
Trigger: TCTAAGTGTAGGGCCTGGCCAGGGGCCAGGGTCTGC...ATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATGCAGACCCTGGCCCCTaGCCAGGCCCTACACTTAGA +
Preference number: 4 (lower is better)
Translates to: AVEVKAAGALSIRLCLLYADPGP*PGPTLR
Trigger: TCTAAGTGTAGGGCCTGGCCAGGGGCCAGGGTCTGC...ATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGCAGACCCTGGCCCCTaGCCAGGCCCTACACTTAGA +
Preference number: 4 (lower is better)
Translates to: ATHFKMRLRPRLKRQLPEADPGP*PGPTLR
Trigger: TCTAAGTGTAGGGCCTGGCCAGGGGCCAGGGTCTGC...CTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGCGCGTCCTCTGCTGTaGAGCTCTCAGCCACGTAGG +
Preference number: 4 (lower is better)
Translates to: RPRLKRQLPEVNPFGKRHARPLL*SSQPRR
Trigger: CCTACGTGGCTGAGAGCTCCACAGCAGAGGACGCGC...ATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGGCGCGTCCTCTGCTGTaGAGCTCTCAGCCACGTAGG +
Preference number: 4 (lower is better)
Translates to: LQAPSLLGCVCCILSSLEARPLL*SSQPRR
Trigger: CCTACGTGGCTGAGAGCTCCACAGCAGAGGACGCGC...CTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGGGAAGAAAAGTATCGAAGGCCGTaGAGGTTAAGGCTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: QVQRTPSSTLHCPQAREEKYRRP*RLRLQA
Trigger: CGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT...TTCTTCCCTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTAGCCCGGGGCGTGCCTaGTGCCTCACGCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: YPLQDEAKAKTEAATARGSPGRA*CLTLIP
Trigger: AGGAATGAGCGTGAGGCACCAGGCACGCCCCGGGCT...ACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCGGCTCCAGGTGTCACTaGAGGAGGATGGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSIRLCLLYPLVLGAARVGSRCH*RRMGGG
Trigger: GCCGCCACCCATCCTCCTCCAGTGACACCTGGAGCC...GACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGACTCCCACTGCCTCCCTaGGGAGGGGGTACCACGCTA +
Preference number: 4 (lower is better)
Translates to: SYPLQDEAKAKTEAATARLPLPP*GGGTTL
Trigger: TAGCGTGGTACCCCCTCCCCAGGGAGGCAGTGGGAG...TCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTTGATTCTGGACTACCGGCGGGGAGGGGGTaGAGGCCGCTTCAGCTTACG +
Preference number: 4 (lower is better)
Translates to: ALEDGHAATFQKCFDSGLPAGRG*RPLQLT
Trigger: CGTAAGCTGAAGCGGCCTCCACCCCCTCCCCGCCGG...TAGTCCAGAATCAAAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCGGTGGCCGAGGCAGCTaGGGCTGCTGCTTACGCTCA +
Preference number: 4 (lower is better)
Translates to: LSIRLCLLYPLVLGAARVGGRGS*GCCLRS
Trigger: TGAGCGTAAGCAGCAGCCCCAGCTGCCTCGGCCACC...GACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCGGTGGCCGAGGCAGCTaGGGCTGCTGCTTACGCTCA +
Preference number: 4 (lower is better)
Translates to: VKAAGALSIRLCLLYPLVGGRGS*GCCLRS
Trigger: TGAGCGTAAGCAGCAGCCCCAGCTGCCTCGGCCACC...GACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp ACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCAGACGTGACACGCTCTaGTTTAGGGGGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: TPGLHKYRRPWRLRLQAPRRDTL*FRGLGL
Trigger: AAGGCCCAGCCCCCTAAACCAGAGCGTGTCACGTCT...GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp ATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGAGCTGGAGGAGGGTCTaGGCTACCCGGGGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: IRLCLLYPLVLGAARVPESWRRV*ATRGLN
Trigger: ATTCAGCCCCCGGGTAGCCCAGACCCTCCTCCAGCT...CTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGCTTGGCCACATGCCCTaGGGCGGAACTAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LLGCVCCILSSLELLGSLLGHMP*GGTSRS
Trigger: GCTCCTGCTAGTTCCGCCCCAGGGCATGTGGCCAAG...CAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTACACCTACGTCCTCCCTaGGAGGCCCACCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: LRTGATPGLHKYRRPWRLHLRPP*EAHHPC
Trigger: GCAAGGGTGGTGGGCCTCCCAGGGAGGACGTAGGTG...TAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGCTTCGCAGTGGTTTCTaGGGGGCCGATGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWLRSGF*GADGPS
Trigger: ACTGGGGCCATCGGCCCCCCAGAAACCACTGCGAAG...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp ATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGTTGAGAGGCCTTCACTaGCGGCCAGGCTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: IRLCLLYPLVLGAARVPELRGLH*RPGCRP
Trigger: AGGCCTGCAGCCTGGCCGCCAGTGAAGGCCTCTCAA...CTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATTGAGAGGCCTTCACTaGCGGCCAGGCTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KAKTEAATARGEPIREKALRGLH*RPGCRP
Trigger: AGGCCTGCAGCCTGGCCGCCAGTGAAGGCCTCTCAA...TGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTCCTCAGGCGGTCCGTTaGGCTGAGCACTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: AGALSIRLCLLYPLVLGAPQAVR*AEHLRG
Trigger: GCCTCTCAAGTGCTCAGCCCAACGGACCGCCTGAGG...AGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGGCCACCAGATTCCGCTaGAGGTCAGCCTGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GCVCCILSSLELLGSLRLATRFR*RSAWVS
Trigger: TGAGACCCAGGCTGACCTCCAGCGGAATCTGGTGGC...CAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGGGAAGAAGCTCACCCATTTCTTTaGGCCCTGGCAGTCTCCTAC +
Preference number: 4 (lower is better)
Translates to: QVQRTPSSTLHCPQAREEAHPFL*ALAVSY
Trigger: GTAGGAGACTGCCAGGGCCCAAAGAAATGGGTGAGC...TTCTTCCCTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTGCTGGATCCTAGGGGGTaGGGTAGATCAGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ARVPEIVFLGWVSSASEVLDPRG*GRSGAL
Trigger: CAGAGCTCCTGATCTACCCCACCCCCTAGGATCCAG...CACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp AGGATGACTCTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGCAACGAACACCACCATaGCTGCGGGCGCCACTCGAG +
Preference number: 4 (lower is better)
Translates to: RMTLRTGATPGLHKYRRPQRTPP*LRAPLE
Trigger: CTCGAGTGGCGCCCGCAGTCATGGTGGTGTTCGTTG...CGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294521.7
ENST00000373480.1
CDS-3UTR TCA 90 bp GGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGGGCAACTGCCAGAGGTaGACCCATTCGGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: GCVCCILSSLELLGSLRLGNCQR*THSGKG
Trigger: GCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCC...CAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCAACTCAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACATCCAGATTTGGGAAATaGGTCATGGGGTCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PTQWAGAAYTQQHSPLPTSRFGK*VMGSEG
Trigger: ACCTTCCGACCCCATGACTCATTTCCCAAATCTGGA...TGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCACCGCCGACGCCGCCCTaGCTTTCCAGATTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPPPTPP*LSRFGK
Trigger: TTTCCCAAATCTGGAAAGTCAGGGCGGCGTCGGCGG...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TGCTGCCATGTAAACAGGCCCTTGGAATGCAACTTCCTGGGCCCTGGAGGATGGCACTGCTCCGAATGCTaGGTGTGTCTGAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CCHVNRPLECNFLGPGGWHCSEC*VCLRPQ
Trigger: CTGAGGCCTCAGACACACTCAGCATTCGGAGCAGTG...CCATCCTCCAGGGCCCAGGAAGTTGCATTCCAAGGGCCTGTTTACATGGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp AGGATGACTCTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGGGAGTGGGAGGGGACTaGGGACTGGCGTCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: RMTLRTGATPGLHKYRRPGVGGD*GLASVV
Trigger: TACCACTGACGCCAGTCCTCAGTCCCCTCCCACTCC...CGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAGGAGTGGGAGGGGACTaGGGACTGGCGTCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: LRTGATPGLHKYRRPWRLGVGGD*GLASVV
Trigger: TACCACTGACGCCAGTCCTCAGTCCCCTCCCACTCC...TAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCCTGCAAAGCAGTAGCTaGGGAGGACGAAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LQDEAKAKTEAATARGEPLQSSS*GGRSSR
Trigger: CCGGCTGCTTCGTCCTCCTCAGCTACTGCTTTGCAG...GGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCTGCAAAGCAGTAGCTaGGGAGGACGAAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: AVEVKAAGALSIRLCLLYLQSSS*GGRSSR
Trigger: CCGGCTGCTTCGTCCTCCTCAGCTACTGCTTTGCAG...ATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp AGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGTTGGGCTGAGCACTTaGGAGGCCTTCACTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SYPLQDEAKAKTEAATARVGLST*EAFTGG
Trigger: GCCGCCAGTGAAGGCCTCTCAAGTGCTCAGCCCAAC...TCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTCCAAGTGCCCCGAGATaGCTCTACTGCTCACCCATT +
Preference number: 4 (lower is better)
Translates to: GAARVPEIVFLGWVSSASPSAPR*LYCSPI
Trigger: AATGGGTGAGCAGTAGAGTCATCTCGGGGCACTTGG...ACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGTACAGTAAGAGAGGCTaGTACCTAGGGGACCACCAC +
Preference number: 4 (lower is better)
Translates to: CGQGGKGQVLDTAKCPEMYSKRG*YLGDHH
Trigger: GTGGTGGTCCCCTAGGTATCAGCCTCTCTTACTGTA...CATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTTTCCCTATCCCACCCTaGCTCTCCAGAGCAGAGCGC +
Preference number: 4 (lower is better)
Translates to: AGALSIRLCLLYPLVLGAFPIPP*LSRAER
Trigger: GCGCTCTGCTCTGGAGAGGCAGGGTGGGATAGGGAA...AGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294521.7
ENST00000373480.1
CDS-3UTR GCA 90 bp AAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGGAGAGCGCGTCCTCTaGTGTGGAGCTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: KYRRPWRLRLQAPSLLGCGERVL*CGALSH
Trigger: GTGGCTGAGAGCTCCACAGCAGAGGACGCGCTCTCC...ACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGGGAAGGTGGAGCCTTTaGGCTGGATCATCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: GCVCCILSSLELLGSLRLGRWSL*AGSSPS
Trigger: GCTCGGAGATGATCCAGCGCAAAGGCTCCACCTTCC...CAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATAGGCCAAGCTCCTTCTaGACATGCTGCGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RPRLKRQLPEVNPFGKRHRPSSF*TCCGSP
Trigger: GGGACTCCCGCAGCATGTGCAGAAGGAGCTTGGCCT...ATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTATTAGTGTGCGCAGGCTaGAGCGGCCTAGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LRTGATPGLHKYRRPWRLLVCAG*SGLGPP
Trigger: TGGTGGCCCTAGGCCGCTGCAGCCTGCGCACACTAA...TAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCTGCAGCGGCTTAGTGTaGGCAGGCTGCAGCGGCCTA +
Preference number: 4 (lower is better)
Translates to: SLLGCVCCILSSLELLGSCSGLV*AGCSGL
Trigger: TAGGCCGCTGCAGCCTGCGCACACTAAGCCGCTGCA...GGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGATGCAGCGGCTTAGTGTaGGCAGGCTGCAGCGGCCTA +
Preference number: 4 (lower is better)
Translates to: SYPLQDEAKAKTEAATARCSGLV*AGCSGL
Trigger: TAGGCCGCTGCAGCCTGCGCACACTAAGCCGCTGCA...TCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGCTCCGGCCAGACAACTaGCCACTGCTCCGAATGCTG +
Preference number: 4 (lower is better)
Translates to: ATHFKMRLRPRLKRQLPELRPDN*PLLRML
Trigger: CAGCATTCGGAGCAGTGGGCAGTTGTCTGGCCGGAG...CTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp ATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGCTCCGGCCAGACAACTaGCCACTGCTCCGAATGCTG +
Preference number: 4 (lower is better)
Translates to: IRLCLLYPLVLGAARVPELRPDN*PLLRML
Trigger: CAGCATTCGGAGCAGTGGGCAGTTGTCTGGCCGGAG...CTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCCGAGGCAGCTGGGGCTaGTGCTTACGCTCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: LQDEAKAKTEAATARGEPRGSWG*CLRSGL
Trigger: TAAGCCTGAGCGTAAGCAGCAGCCCCAGCTGCCTCG...GGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp ATGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTGAGGCCCACCACCCTTaGTACAGCCCACCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: MQLPGPWRMAMQPLFKSAEAHHP*YSPPVP
Trigger: AGGAACCGGTGGGCTGTAGCAAGGGTGGTGGGCCTC...AGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGAGGCCCACCACCCTTaGTACAGCCCACCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: SYPLQDEAKAKTEAATAREAHHP*YSPPVP
Trigger: AGGAACCGGTGGGCTGTAGCAAGGGTGGTGGGCCTC...TCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAACGGGCCGCTCCAGCTaGAGCTTCCTAGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SYPLQDEAKAKTEAATARTGRSS*SFLEPL
Trigger: CAAGGGCTCTAGGAAGCTGCAGCTGGAGCGGCCCGT...TCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATGCCGCTGCTCTGAGATaGTCCGGAGTTCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: AVEVKAAGALSIRLCLLYAAALR*SGVLPP
Trigger: TGGTGGCAGAACTCCGGAGCATCTCAGAGCAGCGGC...ATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGAGCCGCTGCTCTGAGATaGTCCGGAGTTCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: LYPLVLGAARVPEIVFLGAAALR*SGVLPP
Trigger: TGGTGGCAGAACTCCGGAGCATCTCAGAGCAGCGGC...TCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCATCTGGGCCCACCAGCTaGAGGACACCTCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPSGPTS*RTPPFS
Trigger: GGAGAATGGAGGTGTCCTGCAGCTGGTGGGCCCAGA...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATCTGGGCCCACCAGCTaGAGGACACCTCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: LYPLVLGAARVPEIVFLGSGPTS*RTPPFS
Trigger: GGAGAATGGAGGTGTCCTGCAGCTGGTGGGCCCAGA...TCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTTCTGGGCCCACCAGCTaGAGGACACCTCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: AGALSIRLCLLYPLVLGASGPTS*RTPPFS
Trigger: GGAGAATGGAGGTGTCCTGCAGCTGGTGGGCCCAGA...AGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCTGAATCAGGTGAGGTGTCCTaGTCCCAACTCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SHPCHSALAAPSGTTCAESGEVS*SQLCSL
Trigger: GAGGCTGCAGAGTTGGGAGCAGGACACCTCACCTGA...TTCAGCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCGGGGATGGATTCTGCTaGCATGTAAACAGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCGDGFC*HVNRPL
Trigger: CAAGGGCCTGTTTACATGGCAGCAGAATCCATCCCC...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAAGCTATGGGCTGACTaGCGGGGATGGATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ELLGSLRLCFWDGSAVPVKLWAD*RGWILL
Trigger: CAGCAGAATCCATCCCCGGCAGTCAGCCCATAGCTT...CACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCCAGCCTTGGTGAGGGGGCGGGGAGGTCATGTCAACCTCTCTCCTTGGTGGTGAAAAGCAAGGTTCCTTaGCAGACTCAAGCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PSLGEGAGRSCQPLSLVVKSKVP*QTQAQV
Trigger: GACTTGGGCTTGAGTCTGGCAAGGAACCTTGCTTTT...CACCACCAAGGAGAGAGGTTGACATGACCTCCCCGCCCCCTCACCAAGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTCAGCCATTCCCAGGTTaGTGCCAGGGCCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: VLGAARVPEIVFLGWVSSQPFPG*CQGLVS
Trigger: TGAAACCAGGCCCTGGCAGCAACCTGGGAATGGCTG...ACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGTGTAACCCAGCACTATaGGGATGCGAGCCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWCNPAL*GCEPSR
Trigger: GCGGGAGGGCTCGCATCCCCATAGTGCTGGGTTACA...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294521.7
CDS-3UTR CCA 90 bp CTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCGCAGACCCTGGCCCCTaGCCAGGCCCTACACTTAGA +
Preference number: 4 (lower is better)
Translates to: LSIRLCLLYPLVLGAARVADPGP*PGPTLR
Trigger: TCTAAGTGTAGGGCCTGGCCAGGGGCCAGGGTCTGC...GACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGCAGCCACGTAGGATGTaGTCTGACTGCAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: CGQGGKGQVLDTAKCPEMQPRRM*SDCRRR
Trigger: TCTCCTTCTGCAGTCAGACCACATCCTACGTGGCTG...CATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGTCATCTCCGAGCGGATaGAGAGCGCGTCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: QAPSLLGCVCCILSSLELSSPSG*RARPLL
Trigger: CAGCAGAGGACGCGCTCTCCATCCGCTCGGAGATGA...CAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGTCATCTCCGAGCGGATaGAGAGCGCGTCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWSSPSG*RARPLL
Trigger: CAGCAGAGGACGCGCTCTCCATCCGCTCGGAGATGA...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCATCATCTCCGAGCGGATaGAGAGCGCGTCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VNPFGKRHERRMTLRTGASSPSG*RARPLL
Trigger: CAGCAGAGGACGCGCTCTCCATCCGCTCGGAGATGA...TGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAACACCAGGCCATGGGGTCGGAAGGTaGAGCCTTTGCGCTGGATCA +
Preference number: 4 (lower is better)
Translates to: FGKRHERRMTLRTGATPGHGVGR*SLCAGS
Trigger: TGATCCAGCGCAAAGGCTCCACCTTCCGACCCCATG...GCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGCACTGCTAGGGACATaGGCCGGGTCAATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SIRLCLLYPLVLGAARVPALLGT*AGSMVG
Trigger: CCCCACCATTGACCCGGCCCATGTCCCTAGCAGTGC...AGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTCTTCTGAGCCACCAGTaGTGGGTGGCCGAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KYRRPWRLRLQAPSLLGCLLSHQ*WVAEAA
Trigger: AGCTGCCTCGGCCACCCACCACTGGTGGCTCAGAAG...ACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGCAGGTACCCAGCTGTTaGCTGGGTTGGGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWQVPSC*LGWVDR
Trigger: CCTGTCCACCCAACCCAGCCAACAGCTGGGTACCTG...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTCCTTGGGAGGGAGGGTaGGAGTACCACTTTGGCTCG +
Preference number: 4 (lower is better)
Translates to: CVCCILSSLELLGSLRLCPWEGG*EYHFGS
Trigger: CGAGCCAAAGTGGTACTCCCACCCTCCCTCCCAAGG...ACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCCCTTGGGAGGGAGGGTaGGAGTACCACTTTGGCTCG +
Preference number: 4 (lower is better)
Translates to: LQDEAKAKTEAATARGEPPWEGG*EYHFGS
Trigger: CGAGCCAAAGTGGTACTCCCACCCTCCCTCCCAAGG...GGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp ATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGTCTGGTTTAGGGGGCTaGGCCTTGCCTGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: IRLCLLYPLVLGAARVPESGLGG*ALPGEA
Trigger: TGCTTCCCCAGGCAAGGCCCAGCCCCCTAAACCAGA...CTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGAGACGTGACACGCTCTaGTTTAGGGGGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRRRDTL*FRGLGL
Trigger: AAGGCCCAGCCCCCTAAACCAGAGCGTGTCACGTCT...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGGGAAGAAGAAGGTGGGGGTGACTaGTCTTTGGAGATGACAGGA +
Preference number: 4 (lower is better)
Translates to: QVQRTPSSTLHCPQAREEEGGGD*SLEMTG
Trigger: TCCTGTCATCTCCAAAGACCAGTCACCCCCACCTTC...TTCTTCCCTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGGGGTGGATGATAAGATaGGGGTGGGGAAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LQAPSLLGCVCCILSSLEGWMIR*GWGRWG
Trigger: CCCCCACCTTCCCCACCCCCATCTTATCATCCACCC...CTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGGCCAGTTGGGATCTTaGAGGGGCTCCTCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: ATHFKMRLRPRLKRQLPEGQLGS*RGSSAV
Trigger: GACTGCTGAGGAGCCCCTCCAAGATCCCAACTGGCC...CTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGGCCAGTTGGGATCTTaGAGGGGCTCCTCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: AGALSIRLCLLYPLVLGAGQLGS*RGSSAV
Trigger: GACTGCTGAGGAGCCCCTCCAAGATCCCAACTGGCC...AGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCACTTGGCCACATGCCCTaGGGCGGAACTAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPLGHMP*GGTSRS
Trigger: GCTCCTGCTAGTTCCGCCCCAGGGCATGTGGCCAAG...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGAGCTCTGAGCAGAACAGTGCTCACTGATTATCCTCTTTCCCCAACTCAGTGGAGTCGGACCGCAGCATaGAGCCCTGAGGAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GALSRTVLTDYPLSPTQWSRTAA*SPEEGA
Trigger: TGCCCCCTCCTCAGGGCTCCATGCTGCGGTCCGACT...CCACTGAGTTGGGGAAAGAGGATAATCAGTGAGCACTGTTCTGCTCAGAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGCCACCAGATTCCGCTaGAGGTCAGCCTGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: RPRLKRQLPEVNPFGKRHATRFR*RSAWVS
Trigger: TGAGACCCAGGCTGACCTCCAGCGGAATCTGGTGGC...ATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCACCCTCTCCCGCCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAACTGGGCCCTGGAGGATaGCCATGCAGCCACTTTTCA +
Preference number: 4 (lower is better)
Translates to: PPSPASYPLQDEAKAKTELGPGG*PCSHFS
Trigger: TGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAG...TTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGGCGGGAGAGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTCAACTTCCTGGGCCCTaGAGGATGGCCATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: AGALSIRLCLLYPLVLGAQLPGP*RMAMQP
Trigger: TGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTG...AGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGACAACTTCCTGGGCCCTaGAGGATGGCCATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LYPLVLGAARVPEIVFLGQLPGP*RMAMQP
Trigger: TGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTG...TCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTTGGAATGCAACTTCCTaGGCCCTGGAGGATGGCCAT +
Preference number: 4 (lower is better)
Translates to: GAARVPEIVFLGWVSSASWNATS*ALEDGH
Trigger: ATGGCCATCCTCCAGGGCCCAGGAAGTTGCATTCCA...ACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGACTGGTCCCAAGCTATaGGCTGACTGCCGGGGATGG +
Preference number: 4 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHETGPKL*ADCRGW
Trigger: CCATCCCCGGCAGTCAGCCCATAGCTTGGGACCAGT...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp ATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGACTGGTCCCAAGCTATaGGCTGACTGCCGGGGATGG +
Preference number: 4 (lower is better)
Translates to: IRLCLLYPLVLGAARVPETGPKL*ADCRGW
Trigger: CCATCCCCGGCAGTCAGCCCATAGCTTGGGACCAGT...CTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGACCACCCACCCCAGTGTaGTCAAGGAGGCAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SYPLQDEAKAKTEAATARPPTPV*SRRQGA
Trigger: TGCCCCTTGCCTCCTTGACCACACTGGGGTGGGTGG...TCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAACACCAGGCCTTTCCCCAACTCAGTaGGCAGGTGCAGCGTACACC +
Preference number: 4 (lower is better)
Translates to: FGKRHERRMTLRTGATPGLSPTQ*AGAAYT
Trigger: GGTGTACGCTGCACCTGCCCACTGAGTTGGGGAAAG...GCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGCTGCCATGTAAACAGGCCCTTGGAATGCAACTTCCTGGGCCCTGGAGGATGGCTTTCCCCAACTCAGTaGGCAGGTGCAGCGTACACC +
Preference number: 4 (lower is better)
Translates to: CCHVNRPLECNFLGPGGWLSPTQ*AGAAYT
Trigger: GGTGTACGCTGCACCTGCCCACTGAGTTGGGGAAAG...CCATCCTCCAGGGCCCAGGAAGTTGCATTCCAAGGGCCTGTTTACATGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGCTTTGACCCAGTCCTaGATCCTAGGGGGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: DEAKAKTEAATARGEPIRALTQS*ILGGGV
Trigger: TACCCCACCCCCTAGGATCCAGGACTGGGTCAAAGC...CCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTGCCTGGTGGCTTTGACCCAGTCCTaGATCCTAGGGGGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: SLRLCFWDGSAVPVRCLVALTQS*ILGGGV
Trigger: TACCCCACCCCCTAGGATCCAGGACTGGGTCAAAGC...CACCAGGCACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CAA 72 bp ATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATaGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: ILSSLELLGSLR*CFWDGSAVPVR
Trigger: CCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CAA 72 bp GCTCACCCATTTCTTTGGGCCCTGGCAGTCTCCTACTaGTCCCCAGCATGGAGCACCTGGCAGAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: AHPFLWALAVSY*SPAWSTWQNWK
Trigger: CTTCCAGTTCTGCCAGGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATGGGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTGGGCCAGCTCTTTCTGTaGGTCTTTGCGCTGGATCAT +
Preference number: 4 (lower is better)
Translates to: ARVPEIVFLGWVSSASEVGQLFL*VFALDH
Trigger: ATGATCCAGCGCAAAGACTCACAGAAAGAGCTGGCC...CACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294521.7
CDS-3UTR TCA 90 bp GGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGAGCTGCTCGGGTCCCTaGGATTGTGTTTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: GCVCCILSSLELLGSLRLSCSGP*DCVSGM
Trigger: CATCCCAGAAACACAATCTCAGGGACCCGAGCAGCT...CAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCACCCTCTCCCGCCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAAGCTGCTCGGGTCCCTaGGATTGTGTTTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: PPSPASYPLQDEAKAKTESCSGP*DCVSGM
Trigger: CATCCCAGAAACACAATCTCAGGGACCCGAGCAGCT...TTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGGCGGGAGAGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGGGCAACTGCCAGAGGTaGACCCATTCGGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHEGNCQR*THSGKG
Trigger: GCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCC...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAAATGCTGAGTGTGTCTaGGGCCTCAGCAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPNAECV*GLSSAA
Trigger: GGCAGCACTGCTGAGGCCTCAGACACACTCAGCATT...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGCACTGCTCCGAATGCTaGGTGTGTCTGAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ATHFKMRLRPRLKRQLPEHCSEC*VCLRPQ
Trigger: CTGAGGCCTCAGACACACTCAGCATTCGGAGCAGTG...CTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGCAGGCACCTTGGGGTaGGGAGGTATGACAAACCTG +
Preference number: 4 (lower is better)
Translates to: ATHFKMRLRPRLKRQLPEAGTLG*GGMTNL
Trigger: CAGGTTTGTCATACCTCCTCACCCCAAGGTGCCTGC...CTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp ATGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTCTGCAAAGCAGTAGCTaGGGAGGACGAAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: MQLPGPWRMAMQPLFKSALQSSS*GGRSSR
Trigger: CCGGCTGCTTCGTCCTCCTCAGCTACTGCTTTGCAG...AGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp ATGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTGGGCTACCCGGGGGCTaGATCTGCAAAGCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: MQLPGPWRMAMQPLFKSAGLPGG*ICKAVA
Trigger: AGCTACTGCTTTGCAGATTCAGCCCCCGGGTAGCCC...AGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GGAGCTCTGAGCAGAACAGTGCTCACTGATTATCCTCTTTCCCCAACTCAGTGGTGGGGGAGCCTTAGGTaGCTTCTTTGGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GALSRTVLTDYPLSPTQWWGSLR*LLWGLG
Trigger: CCCCAGGCCCCAAAGAAGTCACCTAAGGCTCCCCCA...CCACTGAGTTGGGGAAAGAGGATAATCAGTGAGCACTGTTCTGCTCAGAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTTCCCAAGCTATGGGCTaGCTGCCGGGGATGGATTCT +
Preference number: 4 (lower is better)
Translates to: AGALSIRLCLLYPLVLGASQAMG*LPGMDS
Trigger: AGAATCCATCCCCGGCAGTCAGCCCATAGCTTGGGA...AGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCTTCCCTATCCCACCCTaGCTCTCCAGAGCAGAGCGC +
Preference number: 4 (lower is better)
Translates to: SLLGCVCCILSSLELLGSFPIPP*LSRAER
Trigger: GCGCTCTGCTCTGGAGAGGCAGGGTGGGATAGGGAA...GGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294521.7
ENST00000373480.1
CDS-3UTR GCA 90 bp CCCCAGTGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCAGGATGTGGTCTGACTaGAGAAGGAGATGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: PQCGQGGKGQVLDTAKCPRMWSD*RRRCCL
Trigger: AAGACAACATCTCCTTCTGCAGTCAGACCACATCCT...GGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGGAAGGTGGAGCCTTTaGGCTGGATCATCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPGRWSL*AGSSPS
Trigger: GCTCGGAGATGATCCAGCGCAAAGGCTCCACCTTCC...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGAAGGTGGAGCCTTTaGGCTGGATCATCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: APSLLGCVCCILSSLELLGRWSL*AGSSPS
Trigger: GCTCGGAGATGATCCAGCGCAAAGGCTCCACCTTCC...GAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCATCCTTCTGCACATGCTaGGGGAGTCCCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: VNPFGKRHERRMTLRTGASFCTC*GSPSTV
Trigger: CACTGTGCTGGGACTCCCGCAGCATGTGCAGAAGGA...TGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTCCTTCTGCACATGCTaGGGGAGTCCCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: YRRPWRLRLQAPSLLGCVSFCTC*GSPSTV
Trigger: CACTGTGCTGGGACTCCCGCAGCATGTGCAGAAGGA...GACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTAGGCCAAGCTCCTTCTaGACATGCTGCGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: YPLQDEAKAKTEAATARGRPSSF*TCCGSP
Trigger: GGGACTCCCGCAGCATGTGCAGAAGGAGCTTGGCCT...ACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTTGATTCTGGACTACCGGGGCGTGCCTGGTaGCTCACGCTCATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ALEDGHAATFQKCFDSGLPGRAW*LTLIPQ
Trigger: CTGAGGAATGAGCGTGAGGCACCAGGCACGCCCCGG...TAGTCCAGAATCAAAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp ATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGCGGTCAATGTGGCGCTaGAGCATGGCCTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: IRLCLLYPLVLGAARVPERSMWR*SMASVS
Trigger: TGAGACAGAGGCCATGCTGCAGCGCCACATTGACCG...CTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTCGAGGCAGCTGGGGCTaGTGCTTACGCTCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: SIRLCLLYPLVLGAARVPRGSWG*CLRSGL
Trigger: TAAGCCTGAGCGTAAGCAGCAGCCCCAGCTGCCTCG...AGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGATGACAGGAGACTCCTaGAGTGGAGTCAAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: CGQGGKGQVLDTAKCPEMMTGDS*SGVKVV
Trigger: GACAACCTTGACTCCACTGCAGGAGTCTCCTGTCAT...CATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCACAGGCTGAAAATAGAAAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCGGGAGGCCGTGGCTCTaGCTCAGGCGGTCCGTTGGG +
Preference number: 4 (lower is better)
Translates to: AQAENRKVNIPGEYSKRGGRPWL*LRRSVG
Trigger: CCCAACGGACCGCCTGAGGCAGAGCCACGGCCTCCC...GCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTCAGCCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGAGATGCTCCGGAGTTCTaGCACCAGATTCCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LYPLVLGAARVPEIVFLGDAPEF*HQIPLE
Trigger: CTCCAGCGGAATCTGGTGGCAGAACTCCGGAGCATC...TCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGATGCTCCGGAGTTCTaGCACCAGATTCCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PEVNPFGKRHERRMTLRTDAPEF*HQIPLE
Trigger: CTCCAGCGGAATCTGGTGGCAGAACTCCGGAGCATC...TGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGCCTGGAGGATGGCCATaGAGCCACTTTTCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: CGQGGKGQVLDTAKCPEMPGGWP*SHFSKV
Trigger: CACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGG...CATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AGGATGACTCTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGGAGGCAAGGGGCAGGTaGTTGACACTGCCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: RMTLRTGATPGLHKYRRPEARGR*LTLPSA
Trigger: GGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTC...CGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCACCCTCTCCCGCCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAACATCCACCTCCTCAGTaGTTGCTCAGCCCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: PPSPASYPLQDEAKAKTEHPPPQ*LLSPKA
Trigger: AGCCTTTGGGCTGAGCAAGCACTGAGGAGGTGGATG...TTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGGCGGGAGAGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TGCTGCCATGTAAACAGGCCCTTGGAATGCAACTTCCTGGGCCCTGGAGGATGGCAGGGCCTGGTTTCATaGAGCTTTGACCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: CCHVNRPLECNFLGPGGWQGLVS*SFDPVL
Trigger: CAGGACTGGGTCAAAGCTGCATGAAACCAGGCCCTG...CCATCCTCCAGGGCCCAGGAAGTTGCATTCCAAGGGCCTGTTTACATGGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCCAGCCATTCCCAGGTTaGTGCCAGGGCCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: YRRPWRLRLQAPSLLGCVQPFPG*CQGLVS
Trigger: TGAAACCAGGCCCTGGCAGCAACCTGGGAATGGCTG...GACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCTCTGGGTGTCTCCATaGTCCCAGCCACCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: AVEVKAAGALSIRLCLLYLWVSP*SQPPLF
Trigger: GAACAAGGGTGGCTGGGACCATGGAGACACCCAGAG...ATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTCTGGGTGTCTCCATaGTCCCAGCCACCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LQAPSLLGCVCCILSSLELWVSP*SQPPLF
Trigger: GAACAAGGGTGGCTGGGACCATGGAGACACCCAGAG...CTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGGAGGACTGGATACTCTaGGTGTCTCCATGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GCVCCILSSLELLGSLRLEDWIL*VSPWSQ
Trigger: CTGGGACCATGGAGACACCCAGAGTATCCAGTCCTC...CAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGAGGACTGGATACTCTaGGTGTCTCCATGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VLGAARVPEIVFLGWVSSEDWIL*VSPWSQ
Trigger: CTGGGACCATGGAGACACCCAGAGTATCCAGTCCTC...ACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGGGAAGAACTGAGATTGTGTTTCTaGGATGGGTCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: QVQRTPSSTLHCPQAREELRLCF*DGSAVP
Trigger: TGGCACTGCTGACCCATCCCAGAAACACAATCTCAG...TTCTTCCCTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGAAGTATCGAAGGCCGTaGAGGTTAAGGCTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRKYRRP*RLRLQA
Trigger: CGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGTGGAGCCTTTGCGCTaGATCATCTCCGAGCGGATG +
Preference number: 4 (lower is better)
Translates to: RPRLKRQLPEVNPFGKRHVEPLR*IISERM
Trigger: CATCCGCTCGGAGATGATCCAGCGCAAAGGCTCCAC...ATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGGTGGAGCCTTTGCGCTaGATCATCTCCGAGCGGATG +
Preference number: 4 (lower is better)
Translates to: LLGCVCCILSSLELLGSLVEPLR*IISERM
Trigger: CATCCGCTCGGAGATGATCCAGCGCAAAGGCTCCAC...CAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCATGGGGTCGGAAGGTaGAGCCTTTGCGCTGGATCA +
Preference number: 4 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHEHGVGR*SLCAGS
Trigger: TGATCCAGCGCAAAGGCTCCACCTTCCGACCCCATG...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGGGAAGAACGGCAGCACAGCATGTaGAATCAACTTCGACAGGTA +
Preference number: 4 (lower is better)
Translates to: QVQRTPSSTLHCPQAREERQHSM*NQLRQV
Trigger: TACCTGTCGAAGTTGATTCCACATGCTGTGCTGCCG...TTCTTCCCTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTTACCCAGCTGTTGGCTaGGTTGGGTGGACAGGGTGC +
Preference number: 4 (lower is better)
Translates to: KYRRPWRLRLQAPSLLGCYPAVG*VGWTGC
Trigger: GCACCCTGTCCACCCAACCCAGCCAACAGCTGGGTA...ACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCACAGGTACCCAGCTGTTaGCTGGGTTGGGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPQVPSC*LGWVDR
Trigger: CCTGTCCACCCAACCCAGCCAACAGCTGGGTACCTG...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAACACCAGGCGGCTCGAGTATCCACTaGAGGGCGAAAGTGTCCGTT +
Preference number: 4 (lower is better)
Translates to: FGKRHERRMTLRTGATPGGSSIH*RAKVSV
Trigger: AACGGACACTTTCGCCCTCCAGTGGATACTCGAGCC...GCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAAGACGTGACACGCTCTaGTTTAGGGGGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: VNPFGKRHERRMTLRTGARRDTL*FRGLGL
Trigger: AAGGCCCAGCCCCCTAAACCAGAGCGTGTCACGTCT...TGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGGGTGGATGATAAGATaGGGGTGGGGAAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SIRLCLLYPLVLGAARVPGWMIR*GWGRWG
Trigger: CCCCCACCTTCCCCACCCCCATCTTATCATCCACCC...AGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCACCCTCTCCCGCCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAACTCCACAACCACCTCTaGCTTCTTAGTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PPSPASYPLQDEAKAKTELHNHL*LLSGWW
Trigger: CCACCACCCACTAAGAAGCCAGAGGTGGTTGTGGAG...TTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGGCGGGAGAGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGGGGGAAGTCAGCCATaGACAGGTCCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SIRLCLLYPLVLGAARVPGGSQP*TGPAPQ
Trigger: CTGAGGAGCAGGACCTGTCCATGGCTGACTTCCCCC...AGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp ATGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTGGGGGAAGTCAGCCATaGACAGGTCCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: MQLPGPWRMAMQPLFKSAGGSQP*TGPAPQ
Trigger: CTGAGGAGCAGGACCTGTCCATGGCTGACTTCCCCC...AGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCACAGGCTGAAAATAGAAAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCCGATGGCCCCAGTGCTaGGGTGGGAGCCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: AQAENRKVNIPGEYSKRGRWPQC*GGSPSW
Trigger: CCAGGAGGGGCTCCCACCCCAGCACTGGGGCCATCG...GCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTCAGCCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCACAGGCTGAAAATAGAAAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCGGACTGGGGAGGCCGTaGCTCTGCCTCAGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: AQAENRKVNIPGEYSKRGGLGRP*LCLRRS
Trigger: GGACCGCCTGAGGCAGAGCCACGGCCTCCCCAGTCC...GCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTCAGCCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCGCCACCAGATTCCGCTaGAGGTCAGCCTGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SLLGCVCCILSSLELLGSATRFR*RSAWVS
Trigger: TGAGACCCAGGCTGACCTCCAGCGGAATCTGGTGGC...GGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCACCAGCATGGAGCACCTaGCAGAACTGGAAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VNPFGKRHERRMTLRTGAPAWST*QNWKAG
Trigger: TCCTGCCTTCCAGTTCTGCCAGGTGCTCCATGCTGG...TGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCCAGCATGGAGCACCTaGCAGAACTGGAAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LQAPSLLGCVCCILSSLEPAWST*QNWKAG
Trigger: TCCTGCCTTCCAGTTCTGCCAGGTGCTCCATGCTGG...CTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCCCAGCATGGAGCACCTaGCAGAACTGGAAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LQDEAKAKTEAATARGEPPAWST*QNWKAG
Trigger: TCCTGCCTTCCAGTTCTGCCAGGTGCTCCATGCTGG...GGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAACACCAGGCGCTCACCCATTTCTTTaGGCCCTGGCAGTCTCCTAC +
Preference number: 4 (lower is better)
Translates to: FGKRHERRMTLRTGATPGAHPFL*ALAVSY
Trigger: GTAGGAGACTGCCAGGGCCCAAAGAAATGGGTGAGC...GCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCACTGGATCCTAGGGGGTaGGGTAGATCAGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: KAKTEAATARGEPIREKALDPRG*GRSGAL
Trigger: CAGAGCTCCTGATCTACCCCACCCCCTAGGATCCAG...TGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGCTGGATCCTAGGGGGTaGGGTAGATCAGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ATHFKMRLRPRLKRQLPELDPRG*GRSGAL
Trigger: CAGAGCTCCTGATCTACCCCACCCCCTAGGATCCAG...CTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGGCTTTGACCCAGTCCTaGATCCTAGGGGGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: QAPSLLGCVCCILSSLELALTQS*ILGGGV
Trigger: TACCCCACCCCCTAGGATCCAGGACTGGGTCAAAGC...CAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGGGGCCTTCCTCTTGTaGTGTGAGTTCCCCATTGCG +
Preference number: 4 (lower is better)
Translates to: ATHFKMRLRPRLKRQLPEGAFLL*CEFPIA
Trigger: CGCAATGGGGAACTCACACCACAAGAGGAAGGCCCC...CTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373481.7
CDS-3UTR TCA 90 bp GCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTTGATTCTGGACTACAACGAACACCACCATaGCTGCGGGCGCCACTCGAG +
Preference number: 4 (lower is better)
Translates to: ALEDGHAATFQKCFDSGLQRTPP*LRAPLE
Trigger: CTCGAGTGGCGCCCGCAGTCATGGTGGTGTTCGTTG...TAGTCCAGAATCAAAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373480.1
CDS-3UTR TCA 90 bp TCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCGGCAACTGCCAGAGGTaGACCCATTCGGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: SLLGCVCCILSSLELLGSGNCQR*THSGKG
Trigger: GCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCC...GGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGATGGTGTCGGAGGATTaGGAGTGGCTCCAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWMVSED*EWLQVS
Trigger: TGACACCTGGAGCCACTCTCAATCCTCCGACACCAT...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGATGGTGTCGGAGGATTaGGAGTGGCTCCAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LQAPSLLGCVCCILSSLEMVSED*EWLQVS
Trigger: TGACACCTGGAGCCACTCTCAATCCTCCGACACCAT...CTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp AGGATGACTCTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGAATGCTGAGTGTGTCTaGGGCCTCAGCAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RMTLRTGATPGLHKYRRPNAECV*GLSSAA
Trigger: GGCAGCACTGCTGAGGCCTCAGACACACTCAGCATT...CGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGAGGAACATAAAGACGTaGGGGAAGAGGAGACGGAGG +
Preference number: 4 (lower is better)
Translates to: GCVCCILSSLELLGSLRLRNIKT*GKRRRR
Trigger: CCTCCGTCTCCTCTTCCCTCACGTCTTTATGTTCCT...CAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTCCTGTGGGAACACAATaGCTTGGCCACCTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: VLGAARVPEIVFLGWVSSPVGTQ*LGHLQE
Trigger: TTCCTGAAGGTGGCCAAGTCATTGTGTTCCCACAGG...ACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp ATGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTGGGTGGTTGGTGAGTTaGGGCACAGGAAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: MQLPGPWRMAMQPLFKSAGWLVS*GTGRPI
Trigger: GATTGGCCTTCCTGTGCCTCAACTCACCAACCACCC...AGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGACCAAGTGCCCCGAGATaGCTCTACTGCTCACCCATT +
Preference number: 4 (lower is better)
Translates to: LYPLVLGAARVPEIVFLGPSAPR*LYCSPI
Trigger: AATGGGTGAGCAGTAGAGTCATCTCGGGGCACTTGG...TCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp ACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCGGACATGCACCGAAATaGGGAGAGAGAAAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: TPGLHKYRRPWRLRLQAPGHAPK*GERKVR
Trigger: TCTGACCTTTCTCTCTCCTCATTTCGGTGCATGTCC...GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp AGGATGACTCTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGCTTCCTCTTGTGGTGTaGGTTCCCCATTGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: RMTLRTGATPGLHKYRRPLPLVV*VPHCGC
Trigger: GCACCCGCAATGGGGAACTCACACCACAAGAGGAAG...CGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373481.7
CDS-3UTR GCA 90 bp TGCTGCCATGTAAACAGGCCCTTGGAATGCAACTTCCTGGGCCCTGGAGGATGGAAGACGTTGTCCTGGTaGTCATCCACTGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: CCHVNRPLECNFLGPGGWKTLSW*SSTADP
Trigger: AGGGTCTGCAGTGGATGAGCACCAGGACAACGTCTT...CCATCCTCCAGGGCCCAGGAAGTTGCATTCCAAGGGCCTGTTTACATGGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTTCCTTCTGCACATGCTaGGGGAGTCCCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: SIRLCLLYPLVLGAARVPSFCTC*GSPSTV
Trigger: CACTGTGCTGGGACTCCCGCAGCATGTGCAGAAGGA...AGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCACAGGCTGAAAATAGAAAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCCTCCCACAGACGGCTTaGGGGCCACAGGTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: AQAENRKVNIPGEYSKRGLPQTA*GPQVGE
Trigger: CTCCCCCACCTGTGGCCCGCAAGCCGTCTGTGGGAG...GCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTCAGCCTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGCCGGGGATGGATTCTaGTGCCATGTAAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: YPLQDEAKAKTEAATARGAGDGF*CHVNRP
Trigger: GGGCCTGTTTACATGGCAGCAGAATCCATCCCCGGC...ACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCAGCCGGGGATGGATTCTaGTGCCATGTAAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPAGDGF*CHVNRP
Trigger: GGGCCTGTTTACATGGCAGCAGAATCCATCCCCGGC...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCAAAGCTATGGGCTGACTaGCGGGGATGGATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: KAKTEAATARGEPIREKAKLWAD*RGWILL
Trigger: CAGCAGAATCCATCCCCGGCAGTCAGCCCATAGCTT...TGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCTCACTCAGCGTTAGCTaGCCCCAGTGGAACCACCTG +
Preference number: 4 (lower is better)
Translates to: VKAAGALSIRLCLLYPLVSLSVS*PQWNHL
Trigger: CAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGA...GACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCAATGGGGAAGCCAGCTTaGCTAGACAGGTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPMGKPA*LDRWHR
Trigger: CCTGTGCCACCTGTCTAGGCAAGCTGGCTTCCCCAT...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAATGGGGAAGCCAGCTTaGCTAGACAGGTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: LRTGATPGLHKYRRPWRLMGKPA*LDRWHR
Trigger: CCTGTGCCACCTGTCTAGGCAAGCTGGCTTCCCCAT...TAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAAGCAGCACTCTCCACTaGCCACAGGCAAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPSSTLH*PQAREE
Trigger: TTCTTCCCTTGCCTGTGGGCAGTGGAGAGTGCTGCT...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCAGCAGCACTCTCCACTaGCCACAGGCAAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: APSLLGCVCCILSSLELLSSTLH*PQAREE
Trigger: TTCTTCCCTTGCCTGTGGGCAGTGGAGAGTGCTGCT...GAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGCAGGGCCTGGTTTCATaGAGCTTTGACCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: ATHFKMRLRPRLKRQLPEQGLVS*SFDPVL
Trigger: CAGGACTGGGTCAAAGCTGCATGAAACCAGGCCCTG...CTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTAAGAAGACGTTGTCCTaGTGCTCATCCACTGCAGAC +
Preference number: 4 (lower is better)
Translates to: GAARVPEIVFLGWVSSASKKTLS*CSSTAD
Trigger: GTCTGCAGTGGATGAGCACCAGGACAACGTCTTCTT...ACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCAGTTTCTGTTTCTCTTaGTGTTGTAGGGAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: APVASHPCHSALAAPSGTSFCFS*CCRERS
Trigger: GCTCCGCTCCCTACAACACCAAGAGAAACAGAAACT...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTCTCTGGGTGTCTCCATaGTCCCAGCCACCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: YPLQDEAKAKTEAATARGLWVSP*SQPPLF
Trigger: GAACAAGGGTGGCTGGGACCATGGAGACACCCAGAG...ACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTCTCTGGGTGTCTCCATaGTCCCAGCCACCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: KYRRPWRLRLQAPSLLGCLWVSP*SQPPLF
Trigger: GAACAAGGGTGGCTGGGACCATGGAGACACCCAGAG...ACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAGAGGACTGGATACTCTaGGTGTCTCCATGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VNPFGKRHERRMTLRTGAEDWIL*VSPWSQ
Trigger: CTGGGACCATGGAGACACCCAGAGTATCCAGTCCTC...TGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGGAGGACTGGATACTCTaGGTGTCTCCATGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHEEDWIL*VSPWSQ
Trigger: CTGGGACCATGGAGACACCCAGAGTATCCAGTCCTC...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAACACCAGGCCAGCCACGTAGGATGTaGTCTGACTGCAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: FGKRHERRMTLRTGATPGQPRRM*SDCRRR
Trigger: TCTCCTTCTGCAGTCAGACCACATCCTACGTGGCTG...GCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp ACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCATTGTGTTTCTGGGATaGGTCAGCAGTGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: TPGLHKYRRPWRLRLQAPIVFLG*VSSASE
Trigger: CTCACTGGCACTGCTGACCCATCCCAGAAACACAAT...GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCATGGGGTCGGAAGGTaGAGCCTTTGCGCTGGATCA +
Preference number: 4 (lower is better)
Translates to: LSIRLCLLYPLVLGAARVHGVGR*SLCAGS
Trigger: TGATCCAGCGCAAAGGCTCCACCTTCCGACCCCATG...GACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTTGGGAAATGAGTCATaGGGTCGGAAGGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GCVCCILSSLELLGSLRLLGNES*GRKVEP
Trigger: AGGCTCCACCTTCCGACCCCATGACTCATTTCCCAA...CAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCACAGGCTGAAAATAGAAAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCGGCGGCCGTCCACTGTaGGGATGCGTACGGCATCCC +
Preference number: 4 (lower is better)
Translates to: AQAENRKVNIPGEYSKRGGGRPL*GCVRHP
Trigger: GGGATGCCGTACGCATCCCCACAGTGGACGGCCGCC...GCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTCAGCCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGGCAAGGGAAGAAAACCGTCAGACACAATaGTGTCGGAGGATTGAGAGT +
Preference number: 4 (lower is better)
Translates to: QVQRTPSSTLHCPQAREENRQTQ*CRRIES
Trigger: ACTCTCAATCCTCCGACACCATTGTGTCTGACGGTT...TTCTTCCCTTGCCTGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGAACCGTCAGACACAATaGTGTCGGAGGATTGAGAGT +
Preference number: 4 (lower is better)
Translates to: CGQGGKGQVLDTAKCPEMNRQTQ*CRRIES
Trigger: ACTCTCAATCCTCCGACACCATTGTGTCTGACGGTT...CATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGAGCTCTGAGCAGAACAGTGCTCACTGATTATCCTCTTTCCCCAACTCAGTGGTACCCAGCTGTTGGCTaGGTTGGGTGGACAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GALSRTVLTDYPLSPTQWYPAVG*VGWTGC
Trigger: GCACCCTGTCCACCCAACCCAGCCAACAGCTGGGTA...CCACTGAGTTGGGGAAAGAGGATAATCAGTGAGCACTGTTCTGCTCAGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCAGGCTCGAGTATCCACTaGAGGGCGAAAGTGTCCGTT +
Preference number: 4 (lower is better)
Translates to: KAKTEAATARGEPIREKAGSSIH*RAKVSV
Trigger: AACGGACACTTTCGCCCTCCAGTGGATACTCGAGCC...TGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGAGCTCTGAGCAGAACAGTGCTCACTGATTATCCTCTTTCCCCAACTCAGTGGTCTGGTTTAGGGGGCTaGGCCTTGCCTGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GALSRTVLTDYPLSPTQWSGLGG*ALPGEA
Trigger: TGCTTCCCCAGGCAAGGCCCAGCCCCCTAAACCAGA...CCACTGAGTTGGGGAAAGAGGATAATCAGTGAGCACTGTTCTGCTCAGAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGAGGAGACTCCTGCAGTaGAGTCAAGGTTGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QAPSLLGCVCCILSSLELRRLLQ*SQGCLG
Trigger: CCCCAGACAACCTTGACTCCACTGCAGGAGTCTCCT...CAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTGCTTCTTAGTGGGTGGTaGGGGTGGATGATAAGATGG +
Preference number: 4 (lower is better)
Translates to: ARVPEIVFLGWVSSASEVLLSGW*GWMIRW
Trigger: CCATCTTATCATCCACCCCCACCACCCACTAAGAAG...CACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp ACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCCTTCTTAGTGGGTGGTaGGGGTGGATGATAAGATGG +
Preference number: 4 (lower is better)
Translates to: TPGLHKYRRPWRLRLQAPLLSGW*GWMIRW
Trigger: CCATCTTATCATCCACCCCCACCACCCACTAAGAAG...GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTTGGCTTCTTAGTGGGTaGTGGGGGTGGATGATAAGA +
Preference number: 4 (lower is better)
Translates to: GAARVPEIVFLGWVSSASWLLSG*WGWMIR
Trigger: TCTTATCATCCACCCCCACCACCCACTAAGAAGCCA...ACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCCTCCACAACCACCTCTaGCTTCTTAGTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: YRRPWRLRLQAPSLLGCVLHNHL*LLSGWW
Trigger: CCACCACCCACTAAGAAGCCAGAGGTGGTTGTGGAG...GACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCTGGGCCCTGGAGGATaGCCATGCAGCCACTTTTCA +
Preference number: 4 (lower is better)
Translates to: LSIRLCLLYPLVLGAARVLGPGG*PCSHFS
Trigger: TGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAG...GACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGAATGCAACTTCCTaGGCCCTGGAGGATGGCCAT +
Preference number: 4 (lower is better)
Translates to: LYPLVLGAARVPEIVFLGWNATS*ALEDGH
Trigger: ATGGCCATCCTCCAGGGCCCAGGAAGTTGCATTCCA...TCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTTGGAATGCAACTTCCTaGGCCCTGGAGGATGGCCAT +
Preference number: 4 (lower is better)
Translates to: AGALSIRLCLLYPLVLGAWNATS*ALEDGH
Trigger: ATGGCCATCCTCCAGGGCCCAGGAAGTTGCATTCCA...AGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACACCAAGAGGAGTAAACTaGACTGGGCAGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: PEVNPFGKRHERRMTLRTPRGVN*TGQEGT
Trigger: TGTGCCCTCCTGCCCAGTCCAGTTTACTCCTCTTGG...TGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGCCAAGAGGAGTAAACTaGACTGGGCAGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWPRGVN*TGQEGT
Trigger: TGTGCCCTCCTGCCCAGTCCAGTTTACTCCTCTTGG...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGACTCTAGCACCTTTTGTGCTTTaGAATTCCACAGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: QGGKGQVLDTAKCPEMTLAPFVL*NSTAPH
Trigger: GTGTGGGGCTGTGGAATTCCAAAGCACAAAAGGTGC...TAGAGTCATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCATACTTGTCCCCAGCATaGAGCACCTGGCAGAACTGG +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPYLSPA*STWQNW
Trigger: CCAGTTCTGCCAGGTGCTCCATGCTGGGGACAAGTA...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATTACTTGTCCCCAGCATaGAGCACCTGGCAGAACTGG +
Preference number: 4 (lower is better)
Translates to: AVEVKAAGALSIRLCLLYYLSPA*STWQNW
Trigger: CCAGTTCTGCCAGGTGCTCCATGCTGGGGACAAGTA...ATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGCATTTCTTTGGGCCCTaGCAGTCTCCTACTTGTCCC +
Preference number: 4 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRHFFGP*QSPTCP
Trigger: GGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATG...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTGCTCACCCATTTCTTTaGGCCCTGGCAGTCTCCTAC +
Preference number: 4 (lower is better)
Translates to: CVCCILSSLELLGSLRLCAHPFL*ALAVSY
Trigger: GTAGGAGACTGCCAGGGCCCAAAGAAATGGGTGAGC...ACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCACTTTCCCCAACTCAGTaGGCAGGTGCAGCGTACACC +
Preference number: 4 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPLSPTQ*AGAAYT
Trigger: GGTGTACGCTGCACCTGCCCACTGAGTTGGGGAAAG...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TTGGAATGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAACTCGGCCTTTGCCCTTaGCCCTCTTGGCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LECNFLGPGGWPCSHFSKLGLCP*PSWPCP
Trigger: AGGACAAGGCCAAGAGGGCCAAGGGCAAAGGCCGAG...TTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCATTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401073.7
3UTR CAA 72 bp GTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTaGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VEVKAAGALSIR*CLLYPLVLGAA
Trigger: AGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CAA 72 bp CGCAGGATGACTCTGAGGACAGGAGCAACACCAGGCTaGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RRMTLRTGATPG*HKYRRPWRLRL
Trigger: CAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCTGCG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTAGCTGCTCGGGTCCCTaGGATTGTGTTTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: CNFLGPGGWPCSHFSKVLSCSGP*DCVSGM
Trigger: CATCCCAGAAACACAATCTCAGGGACCCGAGCAGCT...AAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp ATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTCGGGAAAAGGCATaGGCGCAGGATGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: IRLCLLYPLVLGAARVPEIREKA*AQDDSE
Trigger: CTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAAT...CTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAATGGTGTCGGAGGATTaGGAGTGGCTCCAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LRTGATPGLHKYRRPWRLMVSED*EWLQVS
Trigger: TGACACCTGGAGCCACTCTCAATCCTCCGACACCAT...TAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGAAGGAACATAAAGACGTaGGGGAAGAGGAGACGGAGG +
Preference number: 4 (lower is better)
Translates to: LYPLVLGAARVPEIVFLGRNIKT*GKRRRR
Trigger: CCTCCGTCTCCTCTTCCCTCACGTCTTTATGTTCCT...TCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTAAAATGAAACTCAGGTaGGGTGTCCTGCTCCCAACT +
Preference number: 4 (lower is better)
Translates to: GAARVPEIVFLGWVSSASKMKLR*GVLLPT
Trigger: AGTTGGGAGCAGGACACCTCACCTGAGTTTCATTTT...ACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCACCTGTGGGAACACAATaGCTTGGCCACCTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPPVGTQ*LGHLQE
Trigger: TTCCTGAAGGTGGCCAAGTCATTGTGTTCCCACAGG...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCCAAGTGCCCCGAGATaGCTCTACTGCTCACCCATT +
Preference number: 4 (lower is better)
Translates to: VKAAGALSIRLCLLYPLVPSAPR*LYCSPI
Trigger: AATGGGTGAGCAGTAGAGTCATCTCGGGGCACTTGG...GACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGTACAGTAAGAGAGGCTaGTACCTAGGGGACCACCAC +
Preference number: 4 (lower is better)
Translates to: ATHFKMRLRPRLKRQLPEYSKRG*YLGDHH
Trigger: GTGGTGGTCCCCTAGGTATCAGCCTCTCTTACTGTA...CTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTACAGTAAGAGAGGCTaGTACCTAGGGGACCACCAC +
Preference number: 4 (lower is better)
Translates to: YRRPWRLRLQAPSLLGCVYSKRG*YLGDHH
Trigger: GTGGTGGTCCCCTAGGTATCAGCCTCTCTTACTGTA...GACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGACTCTACAGAACAGTGCTCACTaGTTATCCTCTTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: QGGKGQVLDTAKCPEMTLQNSAH*LSSFPN
Trigger: GTTGGGGAAAGAGGATAATCAGTGAGCACTGTTCTG...TAGAGTCATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTAAGACGTTGTCCTGGTaGTCATCCACTGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: CVCCILSSLELLGSLRLCKTLSW*SSTADP
Trigger: AGGGTCTGCAGTGGATGAGCACCAGGACAACGTCTT...ACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCACCCTCTCCCGCCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGAGCAACACCAGGCTTaGATAAGTATCGAAGGCCGT +
Preference number: 4 (lower is better)
Translates to: PPSPASYPLQDEAKAKTEEQHQA*ISIEGR
Trigger: ACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTC...TTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGGCGGGAGAGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCTGAAGAGCAACACCAGGCTTaGATAAGTATCGAAGGCCGT +
Preference number: 4 (lower is better)
Translates to: SHPCHSALAAPSGTTCAEEQHQA*ISIEGR
Trigger: ACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTC...TTCAGCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCAAGCTATGGGCTGACTaGCGGGGATGGATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLLGCVCCILSSLELLGSKLWAD*RGWILL
Trigger: CAGCAGAATCCATCCCCGGCAGTCAGCCCATAGCTT...GGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCACCCTCTCCCGCCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAACCTCTGCACCTTTTGTaGTTTGGAATTCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: PPSPASYPLQDEAKAKTEPLHLL*FGIPQP
Trigger: GGGCTGTGGAATTCCAAAGCACAAAAGGTGCAGAGG...TTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGGCGGGAGAGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCCTTGACACTGCCAAGTaGCCCGAGATGACTCTACTG +
Preference number: 4 (lower is better)
Translates to: LQDEAKAKTEAATARGEPLDTAK*PEMTLL
Trigger: CAGTAGAGTCATCTCGGGGCACTTGGCAGTGTCAAG...GGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTCATCCACCTCCTCAGTaGTTGCTCAGCCCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: SIRLCLLYPLVLGAARVPHPPPQ*LLSPKA
Trigger: AGCCTTTGGGCTGAGCAAGCACTGAGGAGGTGGATG...AGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAACACCAGGCGCTGCAGAAAGGACATaGACCGAAATGAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: FGKRHERRMTLRTGATPGAAERT*TEMRRE
Trigger: CTCTCTCCTCATTTCGGTGCATGTCCTTTCTGCAGC...GCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGTGCTGAAAGGCAGCTaGAGAAAGGACATGCACCGA +
Preference number: 4 (lower is better)
Translates to: APSLLGCVCCILSSLELLVLKGS*RKDMHR
Trigger: TCGGTGCATGTCCTTTCTGCAGCTGCCTTTCAGCAC...GAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAGTGCTGAAAGGCAGCTaGAGAAAGGACATGCACCGA +
Preference number: 4 (lower is better)
Translates to: VNPFGKRHERRMTLRTGAVLKGS*RKDMHR
Trigger: TCGGTGCATGTCCTTTCTGCAGCTGCCTTTCAGCAC...TGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGTGCTGAAAGGCAGCTaGAGAAAGGACATGCACCGA +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPVLKGS*RKDMHR
Trigger: TCGGTGCATGTCCTTTCTGCAGCTGCCTTTCAGCAC...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCCATTTCTTTGGGCCCTGGCAGTCTCCTACTTGTCCCCAGCATGGAGCACCTGAAAAGCAAGGTTCCTTaGCAGACTCAAGCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PISLGPGSLLLVPSMEHLKSKVP*QTQAQV
Trigger: GACTTGGGCTTGAGTCTGGCAAGGAACCTTGCTTTT...CAGGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTAAAAGCAAGGTTCCTTaGCAGACTCAAGCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: GAARVPEIVFLGWVSSASKSKVP*QTQAQV
Trigger: GACTTGGGCTTGAGTCTGGCAAGGAACCTTGCTTTT...ACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCACAGGGCCTGGTTTCATaGAGCTTTGACCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPQGLVS*SFDPVL
Trigger: CAGGACTGGGTCAAAGCTGCATGAAACCAGGCCCTG...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCACCCTCTCCCGCCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAAAGAAGACGTTGTCCTaGTGCTCATCCACTGCAGAC +
Preference number: 4 (lower is better)
Translates to: PPSPASYPLQDEAKAKTEKKTLS*CSSTAD
Trigger: GTCTGCAGTGGATGAGCACCAGGACAACGTCTTCTT...TTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGGCGGGAGAGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGAAGAAGACGTTGTCCTaGTGCTCATCCACTGCAGAC +
Preference number: 4 (lower is better)
Translates to: GCVCCILSSLELLGSLRLKKTLS*CSSTAD
Trigger: GTCTGCAGTGGATGAGCACCAGGACAACGTCTTCTT...CAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGCAGCCACGTAGGATGTaGTCTGACTGCAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LLGCVCCILSSLELLGSLQPRRM*SDCRRR
Trigger: TCTCCTTCTGCAGTCAGACCACATCCTACGTGGCTG...CAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTAAGTATCGAAGGCCGTaGAGGTTAAGGCTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: YPLQDEAKAKTEAATARGKYRRP*RLRLQA
Trigger: CGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT...ACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCAAAGTATCGAAGGCCGTaGAGGTTAAGGCTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPKYRRP*RLRLQA
Trigger: CGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGTTGGGAAATGAGTCATaGGGTCGGAAGGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ATHFKMRLRPRLKRQLPELGNES*GRKVEP
Trigger: AGGCTCCACCTTCCGACCCCATGACTCATTTCCCAA...CTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCCTGACTTTCCAGATTTaGGAAATGAGTCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCLTFQI*EMSHGV
Trigger: GACCCCATGACTCATTTCCCAAATCTGGAAAGTCAG...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCGGCTCGAGTATCCACTaGAGGGCGAAAGTGTCCGTT +
Preference number: 4 (lower is better)
Translates to: LSIRLCLLYPLVLGAARVGSSIH*RAKVSV
Trigger: AACGGACACTTTCGCCCTCCAGTGGATACTCGAGCC...GACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGAGACTCCTGCAGTaGAGTCAAGGTTGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LRTGATPGLHKYRRPWRLRRLLQ*SQGCLG
Trigger: CCCCAGACAACCTTGACTCCACTGCAGGAGTCTCCT...TAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTAGGAGACTCCTGCAGTaGAGTCAAGGTTGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: KYRRPWRLRLQAPSLLGCRRLLQ*SQGCLG
Trigger: CCCCAGACAACCTTGACTCCACTGCAGGAGTCTCCT...ACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGGAAGGTGGGGGTGACTaGTCTTTGGAGATGACAGGA +
Preference number: 4 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHEEGGGD*SLEMTG
Trigger: TCCTGTCATCTCCAAAGACCAGTCACCCCCACCTTC...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCTGAACTTCTTAGTGGGTGGTaGGGGTGGATGATAAGATGG +
Preference number: 4 (lower is better)
Translates to: SHPCHSALAAPSGTTCAELLSGW*GWMIRW
Trigger: CCATCTTATCATCCACCCCCACCACCCACTAAGAAG...TTCAGCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCTGAATGGCTTCTTAGTGGGTaGTGGGGGTGGATGATAAGA +
Preference number: 4 (lower is better)
Translates to: SHPCHSALAAPSGTTCAEWLLSG*WGWMIR
Trigger: TCTTATCATCCACCCCCACCACCCACTAAGAAGCCA...TTCAGCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTCCACAACCACCTCTaGCTTCTTAGTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VKAAGALSIRLCLLYPLVLHNHL*LLSGWW
Trigger: CCACCACCCACTAAGAAGCCAGAGGTGGTTGTGGAG...GACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGGCTGACTGCCGGGGATaGATTCTGCTGCCATGTAAA +
Preference number: 4 (lower is better)
Translates to: QAPSLLGCVCCILSSLELADCRG*ILLPCK
Trigger: TTTACATGGCAGCAGAATCCATCCCCGGCAGTCAGC...CAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCAGCTGACTGCCGGGGATaGATTCTGCTGCCATGTAAA +
Preference number: 4 (lower is better)
Translates to: KAKTEAATARGEPIREKAADCRG*ILLPCK
Trigger: TTTACATGGCAGCAGAATCCATCCCCGGCAGTCAGC...TGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTCCAAGAGGAGTAAACTaGACTGGGCAGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: SIRLCLLYPLVLGAARVPPRGVN*TGQEGT
Trigger: TGTGCCCTCCTGCCCAGTCCAGTTTACTCCTCTTGG...AGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCTGAAGCACCTTTTGTGCTTTaGAATTCCACAGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: SHPCHSALAAPSGTTCAEAPFVL*NSTAPH
Trigger: GTGTGGGGCTGTGGAATTCCAAAGCACAAAAGGTGC...TTCAGCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp ATGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTACTTGTCCCCAGCATaGAGCACCTGGCAGAACTGG +
Preference number: 4 (lower is better)
Translates to: MQLPGPWRMAMQPLFKSAYLSPA*STWQNW
Trigger: CCAGTTCTGCCAGGTGCTCCATGCTGGGGACAAGTA...AGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCACATTTCTTTGGGCCCTaGCAGTCTCCTACTTGTCCC +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPHFFGP*QSPTCP
Trigger: GGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATG...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCATTCGGGAAAAGGCATaGGCGCAGGATGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: VKAAGALSIRLCLLYPLVIREKA*AQDDSE
Trigger: CTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAAT...GACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GCACAGGCTGAAAATAGAAAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCGGAGTGGGAGGGGACTaGGGACTGGCGTCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: AQAENRKVNIPGEYSKRGGVGGD*GLASVV
Trigger: TACCACTGACGCCAGTCCTCAGTCCCCTCCCACTCC...GCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTCAGCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCACCCTCTCCCGCCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAAAAATGAAACTCAGGTaGGGTGTCCTGCTCCCAACT +
Preference number: 4 (lower is better)
Translates to: PPSPASYPLQDEAKAKTEKMKLR*GVLLPT
Trigger: AGTTGGGAGCAGGACACCTCACCTGAGTTTCATTTT...TTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGGCGGGAGAGGGTGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp AGGATGACTCTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGCCTGTGGGAACACAATaGCTTGGCCACCTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: RMTLRTGATPGLHKYRRPPVGTQ*LGHLQE
Trigger: TTCCTGAAGGTGGCCAAGTCATTGTGTTCCCACAGG...CGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCGGACATGCACCGAAATaGGGAGAGAGAAAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: YRRPWRLRLQAPSLLGCVGHAPK*GERKVR
Trigger: TCTGACCTTTCTCTCTCCTCATTTCGGTGCATGTCC...GACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGGGACATGCACCGAAATaGGGAGAGAGAAAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LQAPSLLGCVCCILSSLEGHAPK*GERKVR
Trigger: TCTGACCTTTCTCTCTCCTCATTTCGGTGCATGTCC...CTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCAACTCAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAGCAAGGGAAGAATATTaGTTGATTAGCTACAAGGAG +
Preference number: 4 (lower is better)
Translates to: PTQWAGAAYTQQHSPLPTAREEY*LISYKE
Trigger: CTCCTTGTAGCTAATCAATCAATATTCTTCCCTTGC...TGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCAAGACGTTGTCCTGGTaGTCATCCACTGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: LSIRLCLLYPLVLGAARVKTLSW*SSTADP
Trigger: AGGGTCTGCAGTGGATGAGCACCAGGACAACGTCTT...GACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTAAGACGTTGTCCTGGTaGTCATCCACTGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: CNFLGPGGWPCSHFSKVLKTLSW*SSTADP
Trigger: AGGGTCTGCAGTGGATGAGCACCAGGACAACGTCTT...AAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGATGTGGTCTGACTaGAGAAGGAGATGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: ELLGSLRLCFWDGSAVPVRMWSD*RRRCCL
Trigger: AAGACAACATCTCCTTCTGCAGTCAGACCACATCCT...CACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTCTTTCTGTGAGTCTTTaGGCTGGATCATCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: AGALSIRLCLLYPLVLGALSVSL*AGSSPS
Trigger: GCTCGGAGATGATCCAGCGCAAAGACTCACAGAAAG...AGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294521.7
CDS-3UTR GCA 90 bp GCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTGCTATTAGGTTGTGTCTaGTGTATCCTCTCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: ARVPEIVFLGWVSSASEVLLGCV*CILSSL
Trigger: CAAGGACGAGAGGATACAGCAGACACAACCTAATAG...CACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGCTATTAGGTTGTGTCTaGTGTATCCTCTCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: ELLGSLRLCFWDGSAVPVLLGCV*CILSSL
Trigger: CAAGGACGAGAGGATACAGCAGACACAACCTAATAG...CACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCACAGGCTGAAAATAGAAAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCTTAGTGTGCGCAGGCTaGAGCGGCCTAGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: AQAENRKVNIPGEYSKRGLVCAG*SGLGPP
Trigger: TGGTGGCCCTAGGCCGCTGCAGCCTGCGCACACTAA...GCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTCAGCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATATGACAGGAGACTCCTaGAGTGGAGTCAAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: RPRLKRQLPEVNPFGKRHMTGDS*SGVKVV
Trigger: GACAACCTTGACTCCACTGCAGGAGTCTCCTGTCAT...ATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGATGACAGGAGACTCCTaGAGTGGAGTCAAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: QAPSLLGCVCCILSSLELMTGDS*SGVKVV
Trigger: GACAACCTTGACTCCACTGCAGGAGTCTCCTGTCAT...CAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTCCTGGAGGATGGCCATaGAGCCACTTTTCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: CVCCILSSLELLGSLRLCPGGWP*SHFSKV
Trigger: CACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGG...ACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCCTGGAGGATGGCCATaGAGCCACTTTTCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHEPGGWP*SHFSKV
Trigger: CACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGG...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCGGGGATGGATTCTGCTaGCATGTAAACAGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LSIRLCLLYPLVLGAARVGDGFC*HVNRPL
Trigger: CAAGGGCCTGTTTACATGGCAGCAGAATCCATCCCC...GACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTGGGGATGGATTCTGCTaGCATGTAAACAGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: CNFLGPGGWPCSHFSKVLGDGFC*HVNRPL
Trigger: CAAGGGCCTGTTTACATGGCAGCAGAATCCATCCCC...AAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCCTCTGCACCTTTTGTaGTTTGGAATTCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHEPLHLL*FGIPQP
Trigger: GGGCTGTGGAATTCCAAAGCACAAAAGGTGCAGAGG...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CCACCCTCTCCCGCCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAAAGGCCAATCCCCTCTaGACCTTTTGTGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: PPSPASYPLQDEAKAKTEKANPL*TFCALE
Trigger: TTCCAAAGCACAAAAGGTGCAGAGGGGATTGGCCTT...TTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGGCGGGAGAGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTTGACACTGCCAAGTaGCCCGAGATGACTCTACTG +
Preference number: 4 (lower is better)
Translates to: SLLGCVCCILSSLELLGSLDTAK*PEMTLL
Trigger: CAGTAGAGTCATCTCGGGGCACTTGGCAGTGTCAAG...GGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGACTTGACACTGCCAAGTaGCCCGAGATGACTCTACTG +
Preference number: 4 (lower is better)
Translates to: SYPLQDEAKAKTEAATARLDTAK*PEMTLL
Trigger: CAGTAGAGTCATCTCGGGGCACTTGGCAGTGTCAAG...TCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GGAGCTCTGAGCAGAACAGTGCTCACTGATTATCCTCTTTCCCCAACTCAGTGGAGCAGCACTCTCCACTaGCCACAGGCAAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: GALSRTVLTDYPLSPTQWSSTLH*PQAREE
Trigger: TTCTTCCCTTGCCTGTGGGCAGTGGAGAGTGCTGCT...CCACTGAGTTGGGGAAAGAGGATAATCAGTGAGCACTGTTCTGCTCAGAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCAAGAAGACGTTGTCCTaGTGCTCATCCACTGCAGAC +
Preference number: 4 (lower is better)
Translates to: APSLLGCVCCILSSLELLKKTLS*CSSTAD
Trigger: GTCTGCAGTGGATGAGCACCAGGACAACGTCTTCTT...GAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCAGCCACGTAGGATGTaGTCTGACTGCAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LSIRLCLLYPLVLGAARVQPRRM*SDCRRR
Trigger: TCTCCTTCTGCAGTCAGACCACATCCTACGTGGCTG...GACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTTGTGAGTCTTTGCGCTaGATCATCTCCGAGCGGATG +
Preference number: 4 (lower is better)
Translates to: YPLQDEAKAKTEAATARGCESLR*IISERM
Trigger: CATCCGCTCGGAGATGATCCAGCGCAAAGACTCACA...ACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294521.7
CDS-3UTR CCA 90 bp CTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGAATTGTGTTTCTGGGATaGGTCAGCAGTGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LYPLVLGAARVPEIVFLGIVFLG*VSSASE
Trigger: CTCACTGGCACTGCTGACCCATCCCAGAAACACAAT...TCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCACTGAGATTGTGTTTCTaGGATGGGTCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPLRLCF*DGSAVP
Trigger: TGGCACTGCTGACCCATCCCAGAAACACAATCTCAG...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGCTGAGATTGTGTTTCTaGGATGGGTCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWLRLCF*DGSAVP
Trigger: TGGCACTGCTGACCCATCCCAGAAACACAATCTCAG...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCCATTTCTTTGGGCCCTGGCAGTCTCCTACTTGTCCCCAGCATGGAGCACCTGCTGACTTTCCAGATTTaGGAAATGAGTCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: PISLGPGSLLLVPSMEHLLTFQI*EMSHGV
Trigger: GACCCCATGACTCATTTCCCAAATCTGGAAAGTCAG...CAGGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGCGGCAGCACAGCATGTaGAATCAACTTCGACAGGTA +
Preference number: 4 (lower is better)
Translates to: CCILSSLELLGSLRLCFWRQHSM*NQLRQV
Trigger: TACCTGTCGAAGTTGATTCCACATGCTGTGCTGCCG...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCGTGGGAGTACCACTTTaGCTCGAGTATCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: SLLGCVCCILSSLELLGSVGVPL*LEYPLE
Trigger: CTCCAGTGGATACTCGAGCCAAAGTGGTACTCCCAC...GGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCGCTGACTGCCGGGGATaGATTCTGCTGCCATGTAAA +
Preference number: 4 (lower is better)
Translates to: SLLGCVCCILSSLELLGSADCRG*ILLPCK
Trigger: TTTACATGGCAGCAGAATCCATCCCCGGCAGTCAGC...GGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTGCACCTTTTGTGCTTTaGAATTCCACAGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: CVCCILSSLELLGSLRLCAPFVL*NSTAPH
Trigger: GTGTGGGGCTGTGGAATTCCAAAGCACAAAAGGTGC...ACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGTAAAATGCACCTGTaGCTTCCCATCCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: ELLGSLRLCFWDGSAVPVSKMHL*LPILVT
Trigger: AGTGACAAGGATGGGAAGCCACAGGTGCATTTTACT...CACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTTGATTCTGGACTAAGCTGCTCGGGTCCCTaGGATTGTGTTTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: ALEDGHAATFQKCFDSGLSCSGP*DCVSGM
Trigger: CATCCCAGAAACACAATCTCAGGGACCCGAGCAGCT...TAGTCCAGAATCAAAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp AAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTTCCAGATTTGGGAAATaGGTCATGGGGTCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: KYRRPWRLRLQAPSLLGCSRFGK*VMGSEG
Trigger: ACCTTCCGACCCCATGACTCATTTCCCAAATCTGGA...ACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCAGAACAGTGCTCACTaGTTATCCTCTTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHEQNSAH*LSSFPN
Trigger: GTTGGGGAAAGAGGATAATCAGTGAGCACTGTTCTG...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCGAGCAACACCAGGCTTaGATAAGTATCGAAGGCCGT +
Preference number: 4 (lower is better)
Translates to: LSIRLCLLYPLVLGAARVEQHQA*ISIEGR
Trigger: ACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTC...GACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGAGCAACACCAGGCTTaGATAAGTATCGAAGGCCGT +
Preference number: 4 (lower is better)
Translates to: KYRRPWRLRLQAPSLLGCEQHQA*ISIEGR
Trigger: ACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTC...ACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AAAAATCAGAGGCTTTTGGTCTCTCCATTTACTCTAGGTCAAGCTCATTTACCCCGCAGCCGCACCATCTaGAGGAGCGAGGGCGTGACC +
Preference number: 4 (lower is better)
Translates to: KNQRLLVSPFTLGQAHLPRSRTI*RSEGVT
Trigger: GGTCACGCCCTCGCTCCTGCAGATGGTGCGGCTGCG...GGGTAAATGAGCTTGACCTAGAGTAAATGGAGAGACCAAAAGCCTCTGATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp CTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTACCTCTGCACCTTTTGTaGTTTGGAATTCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: LRTGATPGLHKYRRPWRLPLHLL*FGIPQP
Trigger: GGGCTGTGGAATTCCAAAGCACAAAAGGTGCAGAGG...TAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGCTGCAGAAAGGACATaGACCGAAATGAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SYPLQDEAKAKTEAATARAAERT*TEMRRE
Trigger: CTCTCTCCTCATTTCGGTGCATGTCCTTTCTGCAGC...TCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCAGTTTCTGTTTCTCTTaGTGTTGTAGGGAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: APSLLGCVCCILSSLELLSFCFS*CCRERS
Trigger: GCTCCGCTCCCTACAACACCAAGAGAAACAGAAACT...GAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAAGTTTCTGTTTCTCTTaGTGTTGTAGGGAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPSFCFS*CCRERS
Trigger: GCTCCGCTCCCTACAACACCAAGAGAAACAGAAACT...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTATTGTGTTTCTGGGATaGGTCAGCAGTGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: KYRRPWRLRLQAPSLLGCIVFLG*VSSASE
Trigger: CTCACTGGCACTGCTGACCCATCCCAGAAACACAAT...ACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AGGATGACTCTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGATTGTGTTTCTGGGATaGGTCAGCAGTGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: RMTLRTGATPGLHKYRRPIVFLG*VSSASE
Trigger: CTCACTGGCACTGCTGACCCATCCCAGAAACACAAT...CGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AGGATGACTCTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGCTGAGATTGTGTTTCTaGGATGGGTCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: RMTLRTGATPGLHKYRRPLRLCF*DGSAVP
Trigger: TGGCACTGCTGACCCATCCCAGAAACACAATCTCAG...CGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCTGAACTGACTTTCCAGATTTaGGAAATGAGTCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: SHPCHSALAAPSGTTCAELTFQI*EMSHGV
Trigger: GACCCCATGACTCATTTCCCAAATCTGGAAAGTCAG...TTCAGCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTACGGCAGCACAGCATGTaGAATCAACTTCGACAGGTA +
Preference number: 4 (lower is better)
Translates to: LRTGATPGLHKYRRPWRLRQHSM*NQLRQV
Trigger: TACCTGTCGAAGTTGATTCCACATGCTGTGCTGCCG...TAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCAACCGTCAGACACAATaGTGTCGGAGGATTGAGAGT +
Preference number: 4 (lower is better)
Translates to: LQDEAKAKTEAATARGEPNRQTQ*CRRIES
Trigger: ACTCTCAATCCTCCGACACCATTGTGTCTGACGGTT...GGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AAAAATCAGAGGCTTTTGGTCTCTCCATTTACTCTAGGTCAAGCTCATTTACCCGTTGGCTGGGTTGGGTaGACAGGGTGCTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: KNQRLLVSPFTLGQAHLPVGWVG*TGCCPR
Trigger: GCGGGGGCAGCACCCTGTCCACCCAACCCAGCCAAC...GGGTAAATGAGCTTGACCTAGAGTAAATGGAGAGACCAAAAGCCTCTGATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTGGGAACACAATGACTTaGCCACCTTCAGGAACCAAG +
Preference number: 4 (lower is better)
Translates to: CNFLGPGGWPCSHFSKVLGNTMT*PPSGTK
Trigger: CTTGGTTCCTGAAGGTGGCCAAGTCATTGTGTTCCC...AAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCGGGAACACAATGACTTaGCCACCTTCAGGAACCAAG +
Preference number: 4 (lower is better)
Translates to: VKAAGALSIRLCLLYPLVGNTMT*PPSGTK
Trigger: CTTGGTTCCTGAAGGTGGCCAAGTCATTGTGTTCCC...GACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp TTGGAATGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAACATTTCTTTGGGCCCTaGCAGTCTCCTACTTGTCCC +
Preference number: 4 (lower is better)
Translates to: LECNFLGPGGWPCSHFSKHFFGP*QSPTCP
Trigger: GGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATG...TTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCATTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTTGATTCTGGACTATGTCATTCTCAGCCTTaGCAGAGCCTCGGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: ALEDGHAATFQKCFDSGLCHSQP*QSLGLC
Trigger: GCAAAGGCCGAGGCTCTGCCAAGGCTGAGAATGACA...TAGTCCAGAATCAAAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS-3UTR TCA 90 bp GCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTTGATTCTGGACTAATTCGGGAAAAGGCATaGGCGCAGGATGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: ALEDGHAATFQKCFDSGLIREKA*AQDDSE
Trigger: CTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAAT...TAGTCCAGAATCAAAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GGAGCTCTGAGCAGAACAGTGCTCACTGATTATCCTCTTTCCCCAACTCAGTGGTCCAGATTTGGGAAATaGGTCATGGGGTCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: GALSRTVLTDYPLSPTQWSRFGK*VMGSEG
Trigger: ACCTTCCGACCCCATGACTCATTTCCCAAATCTGGA...CCACTGAGTTGGGGAAAGAGGATAATCAGTGAGCACTGTTCTGCTCAGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCAAAAATGAAACTCAGGTaGGGTGTCCTGCTCCCAACT +
Preference number: 4 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPKMKLR*GVLLPT
Trigger: AGTTGGGAGCAGGACACCTCACCTGAGTTTCATTTT...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTCAGAACAGTGCTCACTaGTTATCCTCTTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: CNFLGPGGWPCSHFSKVLQNSAH*LSSFPN
Trigger: GTTGGGGAAAGAGGATAATCAGTGAGCACTGTTCTG...AAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp ATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGCTATTAGGTTGTGTCTaGTGTATCCTCTCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: IRLCLLYPLVLGAARVPELLGCV*CILSSL
Trigger: CAAGGACGAGAGGATACAGCAGACACAACCTAATAG...CTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTCTATTAGGTTGTGTCTaGTGTATCCTCTCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: CVCCILSSLELLGSLRLCLLGCV*CILSSL
Trigger: CAAGGACGAGAGGATACAGCAGACACAACCTAATAG...ACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCACAGGCTGAAAATAGAAAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCAACTCAGTGGGCAGGTaGAGCGTACACCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AQAENRKVNIPGEYSKRGNSVGR*SVHPAA
Trigger: TGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTT...GCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTCAGCCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCACAGGCTGAAAATAGAAAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCCCATTCCCAGGTTGCTaGCAGGGCCTGGTTTCATGC +
Preference number: 4 (lower is better)
Translates to: AQAENRKVNIPGEYSKRGPFPGC*QGLVSC
Trigger: GCATGAAACCAGGCCCTGGCAGCAACCTGGGAATGG...GCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTCAGCCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTTGATTCTGGACTAGAAGGTGGGGGTGACTaGTCTTTGGAGATGACAGGA +
Preference number: 4 (lower is better)
Translates to: ALEDGHAATFQKCFDSGLEGGGD*SLEMTG
Trigger: TCCTGTCATCTCCAAAGACCAGTCACCCCCACCTTC...TAGTCCAGAATCAAAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp GGAGCTCTGAGCAGAACAGTGCTCACTGATTATCCTCTTTCCCCAACTCAGTGGTGGCTTCTTAGTGGGTaGTGGGGGTGGATGATAAGA +
Preference number: 4 (lower is better)
Translates to: GALSRTVLTDYPLSPTQWWLLSG*WGWMIR
Trigger: TCTTATCATCCACCCCCACCACCCACTAAGAAGCCA...CCACTGAGTTGGGGAAAGAGGATAATCAGTGAGCACTGTTCTGCTCAGAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp AAAAATCAGAGGCTTTTGGTCTCTCCATTTACTCTAGGTCAAGCTCATTTACCCGGAACTAGCAGGAGCTaGGGCTGGCGGAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KNQRLLVSPFTLGQAHLPGTSRS*GWRSWR
Trigger: CCTCCAGCTCCGCCAGCCCCAGCTCCTGCTAGTTCC...GGGTAAATGAGCTTGACCTAGAGTAAATGGAGAGACCAAAAGCCTCTGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGAGTAAAATGCACCTGTaGCTTCCCATCCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: QAPSLLGCVCCILSSLELSKMHL*LPILVT
Trigger: AGTGACAAGGATGGGAAGCCACAGGTGCATTTTACT...CAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CAA 72 bp TCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTaGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLLGCVCCILSS*ELLGSLRLCFW
Trigger: CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp AAAAATCAGAGGCTTTTGGTCTCTCCATTTACTCTAGGTCAAGCTCATTTACCCGGCGGTCCGTTGGGCTaGGCACTTGAGAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: KNQRLLVSPFTLGQAHLPGGPLG*ALERPS
Trigger: TGAAGGCCTCTCAAGTGCTCAGCCCAACGGACCGCC...GGGTAAATGAGCTTGACCTAGAGTAAATGGAGAGACCAAAAGCCTCTGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTAGGATGTGGTCTGACTaGAGAAGGAGATGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: KYRRPWRLRLQAPSLLGCRMWSD*RRRCCL
Trigger: AAGACAACATCTCCTTCTGCAGTCAGACCACATCCT...ACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCAGGATGTGGTCTGACTaGAGAAGGAGATGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: VKAAGALSIRLCLLYPLVRMWSD*RRRCCL
Trigger: AAGACAACATCTCCTTCTGCAGTCAGACCACATCCT...GACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AAAAATCAGAGGCTTTTGGTCTCTCCATTTACTCTAGGTCAAGCTCATTTACCCGGAGAGCGCGTCCTCTaGTGTGGAGCTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: KNQRLLVSPFTLGQAHLPGERVL*CGALSH
Trigger: GTGGCTGAGAGCTCCACAGCAGAGGACGCGCTCTCC...GGGTAAATGAGCTTGACCTAGAGTAAATGGAGAGACCAAAAGCCTCTGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp TTGGAATGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAAAGGCCAATCCCCTCTaGACCTTTTGTGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LECNFLGPGGWPCSHFSKKANPL*TFCALE
Trigger: TTCCAAAGCACAAAAGGTGCAGAGGGGATTGGCCTT...TTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCATTCCAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCACAGGCTGAAAATAGAAAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCCATCCACCTCCTCAGTaGTTGCTCAGCCCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: AQAENRKVNIPGEYSKRGHPPPQ*LLSPKA
Trigger: AGCCTTTGGGCTGAGCAAGCACTGAGGAGGTGGATG...GCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTCAGCCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CCA 90 bp CTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGTAAAATGCACCTGTaGCTTCCCATCCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: LRTGATPGLHKYRRPWRLSKMHL*LPILVT
Trigger: AGTGACAAGGATGGGAAGCCACAGGTGCATTTTACT...TAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
3UTR CAA 72 bp AGAAGCACTGGGTGCCCCTCATTGACTAGAGAAGACTaGAGTAAAATGCACCTGTGGCTTCCCATCCTTGTC +
Preference number: 4 (lower is better)
Translates to: RSTGCPSLTRED*SKMHLWLPILV
Trigger: GACAAGGATGGGAAGCCACAGGTGCATTTTACTCAAGTCTTCTCTAGTCAATGAGGGGCACCCAGTGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GCACAGGCTGAAAATAGAAAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCATTCGGGAAAAGGCATaGGCGCAGGATGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: AQAENRKVNIPGEYSKRGIREKA*AQDDSE
Trigger: CTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAAT...GCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTCAGCCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGGCAAGGGAAGAATATTaGTTGATTAGCTACAAGGAG +
Preference number: 4 (lower is better)
Translates to: QAPSLLGCVCCILSSLELAREEY*LISYKE
Trigger: CTCCTTGTAGCTAATCAATCAATATTCTTCCCTTGC...CAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp GCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTTGATTCTGGACTAAAGGCCAATCCCCTCTaGACCTTTTGTGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: ALEDGHAATFQKCFDSGLKANPL*TFCALE
Trigger: TTCCAAAGCACAAAAGGTGCAGAGGGGATTGGCCTT...TAGTCCAGAATCAAAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AAAAATCAGAGGCTTTTGGTCTCTCCATTTACTCTAGGTCAAGCTCATTTACCCGAGGCAAGGGGCAGGTaGTTGACACTGCCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: KNQRLLVSPFTLGQAHLPEARGR*LTLPSA
Trigger: GGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTC...GGGTAAATGAGCTTGACCTAGAGTAAATGGAGAGACCAAAAGCCTCTGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp CTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGGGGAAGAATATTGATTaGTTAGCTACAAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LQAPSLLGCVCCILSSLEGKNID*LATRRR
Trigger: TCTTCTCCTTGTAGCTAATCAATCAATATTCTTCCC...CTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR GCA 90 bp AAAAATCAGAGGCTTTTGGTCTCTCCATTTACTCTAGGTCAAGCTCATTTACCCCGGTCAATGTGGCGCTaGAGCATGGCCTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: KNQRLLVSPFTLGQAHLPRSMWR*SMASVS
Trigger: TGAGACAGAGGCCATGCTGCAGCGCCACATTGACCG...GGGTAAATGAGCTTGACCTAGAGTAAATGGAGAGACCAAAAGCCTCTGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCAGGGAAGAATATTGATTaGTTAGCTACAAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPGKNID*LATRRR
Trigger: TCTTCTCCTTGTAGCTAATCAATCAATATTCTTCCC...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTTGATTCTGGACTAGCAAGGGAAGAATATTaGTTGATTAGCTACAAGGAG +
Preference number: 4 (lower is better)
Translates to: ALEDGHAATFQKCFDSGLAREEY*LISYKE
Trigger: CTCCTTGTAGCTAATCAATCAATATTCTTCCCTTGC...TAGTCCAGAATCAAAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR TCA 90 bp GCACAGGCTGAAAATAGAAAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCGGGAAGAATATTGATTaGTTAGCTACAAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: AQAENRKVNIPGEYSKRGGKNID*LATRRR
Trigger: TCTTCTCCTTGTAGCTAATCAATCAATATTCTTCCC...GCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTCAGCCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS TCA 90 bp GAGCACCCACGGAGCGCAGCCGCACCATCTGCAGGAGCGAGGGCGTaGCCAGGGGCGCACCTACGTCCTCCCTGGGAGGCCCACCACCCT +
Preference number: 5 (lower is better)
Translates to: EHPRSAAAPSAGARA*PGAHLRPPWEAHHP
Trigger: AGGGTGGTGGGCCTCCCAGGGAGGACGTAGGTGCGCCCCTGGTCACGCCCTCGCTCCTGCAGATGGTGCGGCTGCGCTCCGTGGGTGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS GCA 90 bp GTGGGAGCCCCTCCTGGAGCACCCACGGAGCGCAGCCGCACCATCTaGAGGAGCGAGGGCGTGACCAGGGGCGCACCTACGTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: VGAPPGAPTERSRTI*RSEGVTRGAPTSSL
Trigger: CAGGGAGGACGTAGGTGCGCCCCTGGTCACGCCCTCGCTCCTGCAGATGGTGCGGCTGCGCTCCGTGGGTGCTCCAGGAGGGGCTCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS GCA 90 bp CAGAGCCTGCCGGCCGCTTCGCCGACCGCCCGAACCGCCAGAAGCTaGGGACCCGGGGACCGCTGGGGGCCTTCCTCTTGTGGTGTGAGT +
Preference number: 5 (lower is better)
Translates to: QSLPAASPTARTARS*GPGDRWGPSSCGVS
Trigger: ACTCACACCACAAGAGGAAGGCCCCCAGCGGTCCCCGGGTCCGCAGCTTCTGGCGGTTCGGGCGGTCGGCGAAGCGGCCGGCAGGCTCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373481.7
ENST00000468130.1
CDS GCA 90 bp GAGGAGAAGCGCCCCAGCGAGCGGACTGAGGCTGGGCTGGCCGAGTaGAGGCTGCAGCGGCTTAGTGTGCGCAGGCTGCAGCGGCCTAGG +
Preference number: 5 (lower is better)
Translates to: EEKRPSERTEAGLAE*RLQRLSVRRLQRPR
Trigger: CCTAGGCCGCTGCAGCCTGCGCACACTAAGCCGCTGCAGCCTGCACTCGGCCAGCCCAGCCTCAGTCCGCTCGCTGGGGCGCTTCTCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 90 bp CTGCAGGCCCTGCCCCTCCTGTCAATCCAGGCACTGCTAGGGACATaGGCCGGGTCAATGGTGGGGCCCGGGTACCCGTGGACCGGCCAA +
Preference number: 5 (lower is better)
Translates to: LQALPLLSIQALLGT*AGSMVGPGYPWTGQ
Trigger: TTGGCCGGTCCACGGGTACCCGGGCCCCACCATTGACCCGGCCCATGTCCCTAGCAGTGCCTGGATTGACAGGAGGGGCAGGGCCTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 90 bp GGGAACCACCCGGAGACAAGCCAGGTACCCAGCTGTTGGCTGGGTTaGGTGGACAGGGTGCTGCCCCCGCCCCTTCTGAGCCACCAGTGG +
Preference number: 5 (lower is better)
Translates to: GNHPETSQVPSCWLG*VDRVLPPPLLSHQW
Trigger: CCACTGGTGGCTCAGAAGGGGCGGGGGCAGCACCCTGTCCACCCAACCCAGCCAACAGCTGGGTACCTGGCTTGTCTCCGGGTGGTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 90 bp GGCCGCTGCTCTGAGATGCTCCGGAGTTCTGCCACCAGATTCCGCTaGAGGTCAGCCTGGGTCTCAGGGGACACGGGCCGCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GRCSEMLRSSATRFR*RSAWVSGDTGRSSC
Trigger: GCAGCTGGAGCGGCCCGTGTCCCCTGAGACCCAGGCTGACCTCCAGCGGAATCTGGTGGCAGAACTCCGGAGCATCTCAGAGCAGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS GCA 90 bp CTGTGGGGATGCGTACGGCATCCCGTGCACCAGGAGCCCGGGGCGTaGCTGGTGCCTCACGCTCATTCCTCAGGCCAAGCTCCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: LWGCVRHPVHQEPGA*LVPHAHSSGQAPSA
Trigger: TGCAGAAGGAGCTTGGCCTGAGGAATGAGCGTGAGGCACCAGGCACGCCCCGGGCTCCTGGTGCACGGGATGCCGTACGCATCCCCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 90 bp GGGGATGCGTACGGCATCCCGTGCACCAGGAGCCCGGGGCGTGCCTaGTGCCTCACGCTCATTCCTCAGGCCAAGCTCCTTCTGCACATG +
Preference number: 5 (lower is better)
Translates to: GDAYGIPCTRSPGRA*CLTLIPQAKLLLHM
Trigger: CATGTGCAGAAGGAGCTTGGCCTGAGGAATGAGCGTGAGGCACCAGGCACGCCCCGGGCTCCTGGTGCACGGGATGCCGTACGCATCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 90 bp GCTCGAGTATCCACTGGAGGGCGAAAGTGTCCGTTCTGGGGACCGTaGGGGGCGCCGGGAACCACCCGGAGACAAGCCAGGTACCCAGCT +
Preference number: 5 (lower is better)
Translates to: ARVSTGGRKCPFWGP*GAPGTTRRQARYPA
Trigger: AGCTGGGTACCTGGCTTGTCTCCGGGTGGTTCCCGGCGCCCCCCACGGTCCCCAGAACGGACACTTTCGCCCTCCAGTGGATACTCGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS TCA 90 bp TCCCTGGGAGGCCCACCACCCTTGCTACAGCCCACCGGTTCCTTCTaGGGGAGCTTGGCCACATGCCCTGGGGCGGAACTAGCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: SLGGPPPLLQPTGSF*GSLATCPGAELAGA
Trigger: AGCTCCTGCTAGTTCCGCCCCAGGGCATGTGGCCAAGCTCCCTCAGAAGGAACCGGTGGGCTGTAGCAAGGGTGGTGGGCCTCCCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS GCA 90 bp TCAGGCCAAGCTCCTTCTGCACATGCTGCGGGAGTCCCAGCACAGTaGTCCGCCGCTCCCGCCGACGCCGCCCTGACTTTCCAGATTTGG +
Preference number: 5 (lower is better)
Translates to: SGQAPSAHAAGVPAQ*SAAPADAALTFQIW
Trigger: CCAAATCTGGAAAGTCAGGGCGGCGTCGGCGGGAGCGGCGGAGCACTGTGCTGGGACTCCCGCAGCATGTGCAGAAGGAGCTTGGCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 90 bp CAAAGGTGTCATCCCGGTAGACACGGTCAATGTGGCGCTGCAGCATaGCCTCTGTCTCAGCGCCAGCCTCCGCCTCCGCCTCCAGCGCCT +
Preference number: 5 (lower is better)
Translates to: QRCHPGRHGQCGAAA*PLSQRQPPPPPPAP
Trigger: AGGCGCTGGAGGCGGAGGCGGAGGCTGGCGCTGAGACAGAGGCCATGCTGCAGCGCCACATTGACCGTGTCTACCGGGATGACACCTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCGGTGTGAGTTCCCCATaGCGGGTGCGGGAGCCGGCG +
Preference number: 5 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCGVSSP*RVREPA
Trigger: CGCCGGCTCCCGCACCCGCAATGGGGAACTCACACC...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373481.7
CDS TCA 90 bp GCAGGGACACACTCCGGCCAGACAACTGCCCACTGCTCCGAATGCTaGGTGTGTCTGAGGCCTCAGCAGTGCTGCCCCCACTGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: AGTHSGQTTAHCSEC*VCLRPQQCCPHWES
Trigger: GCTCTCCCAGTGGGGGCAGCACTGCTGAGGCCTCAGACACACTCAGCATTCGGAGCAGTGGGCAGTTGTCTGGCCGGAGTGTGTCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS GCA 90 bp GAGTCTGAGCCCGGGAGGCCCATCTTCTCCTCTGGGCCCACCAGCTaGAGGACACCTCCATTCTCCGCCAGCTCCCTCTTAGTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: ESEPGRPIFSSGPTS*RTPPFSASSLLVLS
Trigger: GGACAGGACTAAGAGGGAGCTGGCGGAGAATGGAGGTGTCCTGCAGCTGGTGGGCCCAGAGGAGAAGATGGGCCTCCCGGGCTCAGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 90 bp GAGATGCTCCGGAGTTCTGCCACCAGATTCCGCTGGAGGTCAGCCTaGGTCTCAGGGGACACGGGCCGCTCCAGCTGCAGCTTCCTAGAG +
Preference number: 5 (lower is better)
Translates to: EMLRSSATRFRWRSA*VSGDTGRSSCSFLE
Trigger: CTCTAGGAAGCTGCAGCTGGAGCGGCCCGTGTCCCCTGAGACCCAGGCTGACCTCCAGCGGAATCTGGTGGCAGAACTCCGGAGCATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 90 bp TTGCGGGCCACAGGTGGGGGAGCCTTAGGTGACTTCTTTGGGGCCTaGGGTGGCCGCTGCTCTGAGATGCTCCGGAGTTCTGCCACCAGA +
Preference number: 5 (lower is better)
Translates to: LRATGGGALGDFFGA*GGRCSEMLRSSATR
Trigger: TCTGGTGGCAGAACTCCGGAGCATCTCAGAGCAGCGGCCACCCCAGGCCCCAAAGAAGTCACCTAAGGCTCCCCCACCTGTGGCCCGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 90 bp GGGGTCGGAAGGTGGAGCCTTTGCGCTGGATCATCTCCGAGCGGATaGAGAGCGCGTCCTCTGCTGTGGAGCTCTCAGCCACGTAGGATG +
Preference number: 5 (lower is better)
Translates to: GVGRWSLCAGSSPSG*RARPLLWSSQPRRM
Trigger: CATCCTACGTGGCTGAGAGCTCCACAGCAGAGGACGCGCTCTCCATCCGCTCGGAGATGATCCAGCGCAAAGGCTCCACCTTCCGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 90 bp CAGTGCTCCGCCGCTCCCGCCGACGCCGCCCTGACTTTCCAGATTTaGGAAATGAGTCATGGGGTCGGAAGGTGGAGCCTTTGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: QCSAAPADAALTFQI*EMSHGVGRWSLCAG
Trigger: TCCAGCGCAAAGGCTCCACCTTCCGACCCCATGACTCATTTCCCAAATCTGGAAAGTCAGGGCGGCGTCGGCGGGAGCGGCGGAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 90 bp TGGGGAGGGGGTACCACGCTATTGCTAGCCGTAGAGCTCTCCGGCTaGCCCTCAGAGCCACCCTTAGAGGAGAGGGTGGAACCGTCAGAC +
Preference number: 5 (lower is better)
Translates to: WGGGTTLLLAVELSG*PSEPPLEERVEPSD
Trigger: GTCTGACGGTTCCACCCTCTCCTCTAAGGGTGGCTCTGAGGGCCAGCCGGAGAGCTCTACGGCTAGCAATAGCGTGGTACCCCCTCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 90 bp GGAGCCCACTGTCCCTCTCCCCTGCCCATGAATCCACCTTTGCGCTaGATCATCTCCGAGCGGATGGAGAGCGCGTCCTCTGCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: GAHCPSPLPMNPPLR*IISERMESASSAVE
Trigger: CTCCACAGCAGAGGACGCGCTCTCCATCCGCTCGGAGATGATCCAGCGCAAAGGTGGATTCATGGGCAGGGGAGAGGGACAGTGGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468130.1
CDS-3UTR CAA 90 bp CCCCAGTGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCTGTATCCTCTCGTCCTaGGAGCTGCTCGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: PQCGQGGKGQVLDTAKCPCILSS*ELLGSL
Trigger: CAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACA...GGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACACTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCGCAAGGGGCAGGTGCTaGACACTGCCAAGTGCCCCG +
Preference number: 5 (lower is better)
Translates to: APVASHPCHSALAAPSGTARGRC*TLPSAP
Trigger: CGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGC...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGGCAGAGCCTCGGCCTTaGCCCTTGGCCCTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: ELLGSLRLCFWDGSAVPVAEPRP*PLALLA
Trigger: GGCCAAGAGGGCCAAGGGCAAAGGCCGAGGCTCTGC...CACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS TCA 90 bp GGGAGGGGGCCAGTTGGGATCTTGGAGGGGCTCCTCAGCAGTCTCTaGGGCAGATGGTGCCTCCACAACCACCTCTGGCTTCTTAGTGGG +
Preference number: 5 (lower is better)
Translates to: GRGPVGILEGLLSSL*GRWCLHNHLWLLSG
Trigger: CCCACTAAGAAGCCAGAGGTGGTTGTGGAGGCACCATCTGCCTCAGAGACTGCTGAGGAGCCCCTCCAAGATCCCAACTGGCCCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp TGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGCCAGGTACCCAGCTGTaGGCTGGGTTGGGTGGACAG +
Preference number: 5 (lower is better)
Translates to: CGQGGKGQVLDTAKCPEMPGTQL*AGLGGQ
Trigger: CTGTCCACCCAACCCAGCCAACAGCTGGGTACCTGG...CATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCGCAGTGGAGTCAAGGTaGTCTGGGGAGTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: APVASHPCHSALAAPSGTAVESR*SGEWEG
Trigger: CCCCTCCCACTCCCCAGACAACCTTGACTCCACTGC...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTACTCCCACAGACGGCTaGCGGGCCACAGGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: VLGAARVPEIVFLGWVSSTPTDG*RATGGG
Trigger: TCCCCCACCTGTGGCCCGCAAGCCGTCTGTGGGAGT...ACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CCAACTCAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACACCACCTCCTCAGTGCTaGCTCAGCCCAAAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: PTQWAGAAYTQQHSPLPTPPPQC*LSPKAP
Trigger: AGGAGCCTTTGGGCTGAGCAAGCACTGAGGAGGTGG...TGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGCCTCTGTTCCCAGCCTaGGTGAGGGGGCGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: GCVCCILSSLELLGSLRLPLFPA*VRGRGG
Trigger: ACCTCCCCGCCCCCTCACCAAGGCTGGGAACAGAGG...CAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS TCA 90 bp AGATGCTGGGACCCAATGGAGCCCACTGTCCCTCTCCCCTGCCCATaGATCCACCTTTGCGCTGGATCATCTCCGAGCGGATGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: RCWDPMEPTVPLPCP*IHLCAGSSPSGWRA
Trigger: CGCTCTCCATCCGCTCGGAGATGATCCAGCGCAAAGGTGGATTCATGGGCAGGGGAGAGGGACAGTGGGCTCCATTGGGTCCCAGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468130.1
CDS-3UTR CAA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCTGTATCCTCTCGTCCTaGGAGCTGCTCGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCCILSS*ELLGSL
Trigger: CAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACA...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGACTCTAGGGCCAGTTGGGATCTaGGAGGGGCTCCTCAGCAGT +
Preference number: 5 (lower is better)
Translates to: QGGKGQVLDTAKCPEMTLGPVGI*EGLLSS
Trigger: ACTGCTGAGGAGCCCCTCCAAGATCCCAACTGGCCC...TAGAGTCATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGACTCCCACAGACGGCTaGCGGGCCACAGGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: LLGCVCCILSSLELLGSLTPTDG*RATGGG
Trigger: TCCCCCACCTGTGGCCCGCAAGCCGTCTGTGGGAGT...CAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGACTCCCACAGACGGCTaGCGGGCCACAGGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: LQAPSLLGCVCCILSSLETPTDG*RATGGG
Trigger: TCCCCCACCTGTGGCCCGCAAGCCGTCTGTGGGAGT...CTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACACCTCTGTTCCCAGCCTaGGTGAGGGGGCGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: PEVNPFGKRHERRMTLRTPLFPA*VRGRGG
Trigger: ACCTCCCCGCCCCCTCACCAAGGCTGGGAACAGAGG...TGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp AGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATCCTCTGTTCCCAGCCTaGGTGAGGGGGCGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: RPRLKRQLPEVNPFGKRHPLFPA*VRGRGG
Trigger: ACCTCCCCGCCCCCTCACCAAGGCTGGGAACAGAGG...ATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCACGCCCGGAGAAAAGTTaGGGCGGCGGAGGCCGAGCG +
Preference number: 5 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPRPEKS*GGGGRA
Trigger: CGCTCGGCCTCCGCCGCCCAAACTTTTCTCCGGGCG...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS TCA 90 bp GACTCCTGCAGTGGAGTCAAGGTTGTCTGGGGAGTGGGAGGGGACTaGGGACTGGCGTCAGTGGTAGAAACAGGCCCAGGAACCACAGCA +
Preference number: 5 (lower is better)
Translates to: DSCSGVKVVWGVGGD*GLASVVETGPGTTA
Trigger: TGCTGTGGTTCCTGGGCCTGTTTCTACCACTGACGCCAGTCCTCAGTCCCCTCCCACTCCCCAGACAACCTTGACTCCACTGCAGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS GCA 90 bp CGTCCTCTGCTGTGGAGCTCTCAGCCACGTAGGATGTGGTCTGACTaGAGAAGGAGATGTTGTCTTCATCCGGCCCCGTCCGGGAGGACT +
Preference number: 5 (lower is better)
Translates to: RPLLWSSQPRRMWSD*RRRCCLHPAPSGRT
Trigger: AGTCCTCCCGGACGGGGCCGGATGAAGACAACATCTCCTTCTGCAGTCAGACCACATCCTACGTGGCTGAGAGCTCCACAGCAGAGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
ENST00000468130.1
CDS GCA 90 bp GCCTTTGCGCTGGATCATCTCCGAGCGGATGGAGAGCGCGTCCTCTaGTGTGGAGCTCTCAGCCACGTAGGATGTGGTCTGACTGCAGAA +
Preference number: 5 (lower is better)
Translates to: AFALDHLRADGERVL*CGALSHVGCGLTAE
Trigger: TTCTGCAGTCAGACCACATCCTACGTGGCTGAGAGCTCCACAGCAGAGGACGCGCTCTCCATCCGCTCGGAGATGATCCAGCGCAAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 90 bp TGGAGAGCGCGTCCTCTGCTGTGGAGCTCTCAGCCACGTAGGATGTaGTCTGACTGCAGAAGGAGATGTTGTCTTCATCCGGCCCCGTCC +
Preference number: 5 (lower is better)
Translates to: WRARPLLWSSQPRRM*SDCRRRCCLHPAPS
Trigger: GGACGGGGCCGGATGAAGACAACATCTCCTTCTGCAGTCAGACCACATCCTACGTGGCTGAGAGCTCCACAGCAGAGGACGCGCTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
ENST00000468130.1
CDS CCA 90 bp ATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTaGGATGGGTCAGCAGTGCCAGTGAGGTGCCTGGTGGTCAGGCCA +
Preference number: 5 (lower is better)
Translates to: ILSSLELLGSLRLCF*DGSAVPVRCLVVRP
Trigger: TGGCCTGACCACCAGGCACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 90 bp GCCCCTGGCCAGGCCCTACACTTAGATGTTTGTCATTCTCAGCCTTaGCAGAGCCTCGGCCTTTGCCCTTGGCCCTCTTGGCCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: APGQALHLDVCHSQP*QSLGLCPWPSWPCP
Trigger: AGGACAAGGCCAAGAGGGCCAAGGGCAAAGGCCGAGGCTCTGCCAAGGCTGAGAATGACAAACATCTAAGTGTAGGGCCTGGCCAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS-3UTR CAA 90 bp CCCATTTCTTTGGGCCCTGGCAGTCTCCTACTTGTCCCCAGCATGGAGCACCTGCGGAAGGTGGAGCCTTaGCGCTGGATCATCTCCGAG +
Preference number: 5 (lower is better)
Translates to: PISLGPGSLLLVPSMEHLRKVEP*RWIISE
Trigger: CTCGGAGATGATCCAGCGCAAAGGCTCCACCTTCCG...CAGGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTGGGGGGTACCACGCTATaGCTAGCCGTAGAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: ARVPEIVFLGWVSSASEVGGTTL*LAVELS
Trigger: GGAGAGCTCTACGGCTAGCAATAGCGTGGTACCCCC...CACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCGGGGGTGACTGGTCTTaGGAGATGACAGGAGACTCC +
Preference number: 5 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCGGDWS*EMTGDS
Trigger: GGAGTCTCCTGTCATCTCCAAAGACCAGTCACCCCC...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp TGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGGGGGGTGACTGGTCTTaGGAGATGACAGGAGACTCC +
Preference number: 5 (lower is better)
Translates to: CGQGGKGQVLDTAKCPEMGGDWS*EMTGDS
Trigger: GGAGTCTCCTGTCATCTCCAAAGACCAGTCACCCCC...CATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTCGTTGGGCTGAGCACTaGAGAGGCCTTCACTGGCGG +
Preference number: 5 (lower is better)
Translates to: VLGAARVPEIVFLGWVSSRWAEH*RGLHWR
Trigger: CCGCCAGTGAAGGCCTCTCAAGTGCTCAGCCCAACG...ACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp AGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGCAAGGGGCAGGTGCTaGACACTGCCAAGTGCCCCG +
Preference number: 5 (lower is better)
Translates to: RPRLKRQLPEVNPFGKRHARGRC*TLPSAP
Trigger: CGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGC...ATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGACTCTACCACCTCCTCAGTGCTaGCTCAGCCCAAAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: QGGKGQVLDTAKCPEMTLPPPQC*LSPKAP
Trigger: AGGAGCCTTTGGGCTGAGCAAGCACTGAGGAGGTGG...TAGAGTCATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS TCA 90 bp TTAGAGGAGAGGGTGGAACCGTCAGACACAATGGTGTCGGAGGATTaGGAGTGGCTCCAGGTGTCACTGGAGGAGGATGGGTGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: LEERVEPSDTMVSED*EWLQVSLEEDGWRL
Trigger: CAGCCGCCACCCATCCTCCTCCAGTGACACCTGGAGCCACTCTCAATCCTCCGACACCATTGTGTCTGACGGTTCCACCCTCTCCTCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS GCA 90 bp GTCTTTGCGCTGGATCATCTCCGAGCGGATGGAGAGCGCGTCCTCTaGTGTGGAGCTCTCAGCCACGTAGGATGTGGTCTGACTGCAGAA +
Preference number: 5 (lower is better)
Translates to: VFALDHLRADGERVL*CGALSHVGCGLTAE
Trigger: TTCTGCAGTCAGACCACATCCTACGTGGCTGAGAGCTCCACAGCAGAGGACGCGCTCTCCATCCGCTCGGAGATGATCCAGCGCAAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294521.7
CDS GCA 90 bp TCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTaGCTGGTGGTCAGGCCAGCTCTTTCTGTGAGTCTGAGCCCGGGA +
Preference number: 5 (lower is better)
Translates to: SLRLCFWDGSAVPVR*LVVRPALSVSLSPG
Trigger: TCCCGGGCTCAGACTCACAGAAAGAGCTGGCCTGACCACCAGGCACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS GCA 90 bp ACCTTTGCGCTGGATCATCTCCGAGCGGATGGAGAGCGCGTCCTCTaGTGTGGAGCTCTCAGCCACGTAGGATGTGGTCTGACTGCAGAA +
Preference number: 5 (lower is better)
Translates to: TFALDHLRADGERVL*CGALSHVGCGLTAE
Trigger: TTCTGCAGTCAGACCACATCCTACGTGGCTGAGAGCTCCACAGCAGAGGACGCGCTCTCCATCCGCTCGGAGATGATCCAGCGCAAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468130.1
CDS CCA 90 bp CTGCAGAAGGAGATGTTGTCTTCATCCGGCCCCGTCCGGGAGGACTaGATACTCTGGGTGTCTCCATGGTCCCAGCCACCCTTGTTCAGT +
Preference number: 5 (lower is better)
Translates to: LQKEMLSSSGPVRED*ILWVSPWSQPPLFS
Trigger: ACTGAACAAGGGTGGCTGGGACCATGGAGACACCCAGAGTATCCAGTCCTCCCGGACGGGGCCGGATGAAGACAACATCTCCTTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
ENST00000468130.1
CDS CCA 90 bp CCAGCTCTTTCTGTGAGTCTTTGCGCTGGATCATCTCCGAGCGGATaGAGAGCGCGTCCTCTGCTGTGGAGCTCTCAGCCACGTAGGATG +
Preference number: 5 (lower is better)
Translates to: PALSVSLCAGSSPSG*RARPLLWSSQPRRM
Trigger: CATCCTACGTGGCTGAGAGCTCCACAGCAGAGGACGCGCTCTCCATCCGCTCGGAGATGATCCAGCGCAAAGACTCACAGAAAGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294521.7
CDS-3UTR CAA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCCTCGGGTCCCTGAGATaGTGTTTCTGGGATGGGTCA +
Preference number: 5 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCLGSLR*CFWDGS
Trigger: TGACCCATCCCAGAAACACAATCTCAGGGACCCGAG...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp TGTGGTCAAGGAGGCAAGGGGCAGGTGCTTGACACTGCCAAGTGCCCCGAGATGCTCGGGTCCCTGAGATaGTGTTTCTGGGATGGGTCA +
Preference number: 5 (lower is better)
Translates to: CGQGGKGQVLDTAKCPEMLGSLR*CFWDGS
Trigger: TGACCCATCCCAGAAACACAATCTCAGGGACCCGAG...CATCTCGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGCCTCCTTGACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGCGGAAGGTGGAGCCTTaGCGCTGGATCATCTCCGAG +
Preference number: 5 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRRKVEP*RWIISE
Trigger: CTCGGAGATGATCCAGCGCAAAGGCTCCACCTTCCG...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACACCAGGTACCCAGCTGTaGGCTGGGTTGGGTGGACAG +
Preference number: 5 (lower is better)
Translates to: PEVNPFGKRHERRMTLRTPGTQL*AGLGGQ
Trigger: CTGTCCACCCAACCCAGCCAACAGCTGGGTACCTGG...TGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGGCAGTGGAGTCAAGGTaGTCTGGGGAGTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: LQAPSLLGCVCCILSSLEAVESR*SGEWEG
Trigger: CCCCTCCCACTCCCCAGACAACCTTGACTCCACTGC...CTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGAGCAGTGGAGTCAAGGTaGTCTGGGGAGTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: LYPLVLGAARVPEIVFLGAVESR*SGEWEG
Trigger: CCCCTCCCACTCCCCAGACAACCTTGACTCCACTGC...TCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp ATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGGGGCCAGTTGGGATCTaGGAGGGGCTCCTCAGCAGT +
Preference number: 5 (lower is better)
Translates to: IRLCLLYPLVLGAARVPEGPVGI*EGLLSS
Trigger: ACTGCTGAGGAGCCCCTCCAAGATCCCAACTGGCCC...CTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACACGTTGGGCTGAGCACTaGAGAGGCCTTCACTGGCGG +
Preference number: 5 (lower is better)
Translates to: PEVNPFGKRHERRMTLRTRWAEH*RGLHWR
Trigger: CCGCCAGTGAAGGCCTCTCAAGTGCTCAGCCCAACG...TGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCACGTTGGGCTGAGCACTaGAGAGGCCTTCACTGGCGG +
Preference number: 5 (lower is better)
Translates to: VNPFGKRHERRMTLRTGARWAEH*RGLHWR
Trigger: CCGCCAGTGAAGGCCTCTCAAGTGCTCAGCCCAACG...TGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CCCAGCCTTGGTGAGGGGGCGGGGAGGTCATGTCAACCTCTCTCCTTGGTGGTGTGGGAACACAATGACTaGGCCACCTTCAGGAACCAA +
Preference number: 5 (lower is better)
Translates to: PSLGEGAGRSCQPLSLVVWEHND*ATFRNQ
Trigger: TTGGTTCCTGAAGGTGGCCAAGTCATTGTGTTCCCA...CACCACCAAGGAGAGAGGTTGACATGACCTCCCCGCCCCCTCACCAAGGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTCTGGCAGTCTCCTACTaGTCCCCAGCATGGAGCACC +
Preference number: 5 (lower is better)
Translates to: VLGAARVPEIVFLGWVSSLAVSY*SPAWST
Trigger: GGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAG...ACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp ATGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTGCAAGGGGCAGGTGCTaGACACTGCCAAGTGCCCCG +
Preference number: 5 (lower is better)
Translates to: MQLPGPWRMAMQPLFKSAARGRC*TLPSAP
Trigger: CGGGGCACTTGGCAGTGTCAAGCACCTGCCCCTTGC...AGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CCCATTTCTTTGGGCCCTGGCAGTCTCCTACTTGTCCCCAGCATGGAGCACCTGAATGGGGAAGCCAGCTaGCCTAGACAGGTGGCACAG +
Preference number: 5 (lower is better)
Translates to: PISLGPGSLLLVPSMEHLNGEAS*PRQVAQ
Trigger: CTGTGCCACCTGTCTAGGCAAGCTGGCTTCCCCATT...CAGGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAGGGCCCAAAGAAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp ATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGTTGTCATTCTCAGCCTaGGCAGAGCCTGCCGGCCGC +
Preference number: 5 (lower is better)
Translates to: IRLCLLYPLVLGAARVPELSFSA*AEPAGR
Trigger: GCGGCCGGCAGGCTCTGCCAAGGCTGAGAATGACAA...CTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373481.7
CDS-3UTR CAA 90 bp TTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCAACACCAGGCCTGCAGAAGGAGATGTaGTCTTCATCCGGCCCCGTC +
Preference number: 5 (lower is better)
Translates to: FGKRHERRMTLRTGATPGLQKEM*SSSGPV
Trigger: GACGGGGCCGGATGAAGACAACATCTCCTTCTGCAG...GCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp ACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCCTCGGGTCCCTGAGATaGTGTTTCTGGGATGGGTCA +
Preference number: 5 (lower is better)
Translates to: TPGLHKYRRPWRLRLQAPLGSLR*CFWDGS
Trigger: TGACCCATCCCAGAAACACAATCTCAGGGACCCGAG...GGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGACAGGAGCATGTATCCTCTCGTCCTaGGAGCTGCTCGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: VNPFGKRHERRMTLRTGACILSS*ELLGSL
Trigger: CAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACA...TGCTCCTGTCCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGCGGAAGGTGGAGCCTTaGCGCTGGATCATCTCCGAG +
Preference number: 5 (lower is better)
Translates to: CCILSSLELLGSLRLCFWRKVEP*RWIISE
Trigger: CTCGGAGATGATCCAGCGCAAAGGCTCCACCTTCCG...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATGGGGGTACCACGCTATaGCTAGCCGTAGAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: AVEVKAAGALSIRLCLLYGGTTL*LAVELS
Trigger: GGAGAGCTCTACGGCTAGCAATAGCGTGGTACCCCC...ATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGGGGGGTGACTGGTCTTaGGAGATGACAGGAGACTCC +
Preference number: 5 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRGGDWS*EMTGDS
Trigger: GGAGTCTCCTGTCATCTCCAAAGACCAGTCACCCCC...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CCAACTCAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACATGCACCTTTTGTGCTTaGGAATTCCACAGCCCCACA +
Preference number: 5 (lower is better)
Translates to: PTQWAGAAYTQQHSPLPTCTFCA*EFHSPT
Trigger: TGTGGGGCTGTGGAATTCCAAAGCACAAAAGGTGCA...TGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp ATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGCTGGCAGTCTCCTACTaGTCCCCAGCATGGAGCACC +
Preference number: 5 (lower is better)
Translates to: IRLCLLYPLVLGAARVPELAVSY*SPAWST
Trigger: GGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAG...CTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CCAACTCAGTGGGCAGGTGCAGCGTACACCCAGCAGCACTCTCCACTGCCCACAACTGGGTGCCCCTCATaGACTAGAGAAGACTTGAGT +
Preference number: 5 (lower is better)
Translates to: PTQWAGAAYTQQHSPLPTTGCPS*TREDLS
Trigger: ACTCAAGTCTTCTCTAGTCAATGAGGGGCACCCAGT...TGTGGGCAGTGGAGAGTGCTGCTGGGTGTACGCTGCACCTGCCCACTGAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp TCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTTTCTTCTTGCGCCGCTaGCCCCGCAGCCAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SIRLCLLYPLVLGAARVPFFLRR*PRSQLK
Trigger: CTTCAGCTGGCTGCGGGGCAAGCGGCGCAAGAAGAA...AGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS-3UTR CAA 90 bp TCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTTTGCCCTTGGCCCTCTaGGCCTTGTCCTCCGCCTTC +
Preference number: 5 (lower is better)
Translates to: SIRLCLLYPLVLGAARVPLPLAL*ALSSAF
Trigger: GAAGGCGGAGGACAAGGCCAAGAGGGCCAAGGGCAA...AGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS GCA 90 bp TCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTaGCTGGTGGTCAGGCCAGCTCTTTCTGTGAGTCTTTGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: SLRLCFWDGSAVPVR*LVVRPALSVSLCAG
Trigger: TCCAGCGCAAAGACTCACAGAAAGAGCTGGCCTGACCACCAGGCACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294521.7
CDS-3UTR CAA 90 bp CTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCAGAAGGAGATGTaGTCTTCATCCGGCCCCGTC +
Preference number: 5 (lower is better)
Translates to: LQAPSLLGCVCCILSSLELQKEM*SSSGPV
Trigger: GACGGGGCCGGATGAAGACAACATCTCCTTCTGCAG...CTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCCTGCAGAAGGAGATGTaGTCTTCATCCGGCCCCGTC +
Preference number: 5 (lower is better)
Translates to: APSLLGCVCCILSSLELLLQKEM*SSSGPV
Trigger: GACGGGGCCGGATGAAGACAACATCTCCTTCTGCAG...GAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CCACCCTCTCCCGCCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAACTCGGGTCCCTGAGATaGTGTTTCTGGGATGGGTCA +
Preference number: 5 (lower is better)
Translates to: PPSPASYPLQDEAKAKTELGSLR*CFWDGS
Trigger: TGACCCATCCCAGAAACACAATCTCAGGGACCCGAG...TTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGGCGGGAGAGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTATGTATCCTCTCGTCCTaGGAGCTGCTCGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: LRTGATPGLHKYRRPWRLCILSS*ELLGSL
Trigger: CAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACA...TAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGGGAGCAACACCAGGCTaGCATAAGTATCGAAGGCCG +
Preference number: 5 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRGATPG*HKYRRP
Trigger: CGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCC...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp AGGATGACTCTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGGGGGGTACCACGCTATaGCTAGCCGTAGAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: RMTLRTGATPGLHKYRRPGGTTL*LAVELS
Trigger: GGAGAGCTCTACGGCTAGCAATAGCGTGGTACCCCC...CGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAGAGTCATCCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGGGTGGGAGTACCACTTaGGCTCGAGTATCCACTGGA +
Preference number: 5 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRGGSTT*ARVSTG
Trigger: TCCAGTGGATACTCGAGCCAAAGTGGTACTCCCACC...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GGAGCTCTGAGCAGAACAGTGCTCACTGATTATCCTCTTTCCCCAACTCAGTGGGGGCCAGTTGGGATCTaGGAGGGGCTCCTCAGCAGT +
Preference number: 5 (lower is better)
Translates to: GALSRTVLTDYPLSPTQWGPVGI*EGLLSS
Trigger: ACTGCTGAGGAGCCCCTCCAAGATCCCAACTGGCCC...CCACTGAGTTGGGGAAAGAGGATAATCAGTGAGCACTGTTCTGCTCAGAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCACCTGTGCTGGGAACACAATGACTaGGCCACCTTCAGGAACCAA +
Preference number: 5 (lower is better)
Translates to: GFPSLSLSVSCPQWNHLCWEHND*ATFRNQ
Trigger: TTGGTTCCTGAAGGTGGCCAAGTCATTGTGTTCCCA...GCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGAAATGGGGAAGCCAGCTaGCCTAGACAGGTGGCACAG +
Preference number: 5 (lower is better)
Translates to: LYPLVLGAARVPEIVFLGNGEAS*PRQVAQ
Trigger: CTGTGCCACCTGTCTAGGCAAGCTGGCTTCCCCATT...TCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 90 bp AAGAAGACGTTGTCCTGGTGCTCATCCACTGCAGACCCTGGCCCCTaGCCAGGCCCTACACTTAGATGTTTGTCATTCTCAGCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: KKTLSWCSSTADPGP*PGPTLRCLSFSALA
Trigger: TGCCAAGGCTGAGAATGACAAACATCTAAGTGTAGGGCCTGGCCAGGGGCCAGGGTCTGCAGTGGATGAGCACCAGGACAACGTCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
ENST00000468130.1
CDS-3UTR CAA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGCTGGGAAAGAAGACGTaGTCCTGGTGCTCATCCACT +
Preference number: 5 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRLGKKT*SWCSST
Trigger: AGTGGATGAGCACCAGGACAACGTCTTCTTTCCCAG...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTACTGCAGAAGGAGATGTaGTCTTCATCCGGCCCCGTC +
Preference number: 5 (lower is better)
Translates to: LRTGATPGLHKYRRPWRLLQKEM*SSSGPV
Trigger: GACGGGGCCGGATGAAGACAACATCTCCTTCTGCAG...TAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTGGCCCTCTCTATTAGGTaGTGTCTGCTGTATCCTCTC +
Preference number: 5 (lower is better)
Translates to: ARVPEIVFLGWVSSASEVALSIR*CLLYPL
Trigger: GAGAGGATACAGCAGACACAACCTAATAGAGAGGGC...CACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGAGGAGCAACACCAGGCTaGCATAAGTATCGAAGGCCG +
Preference number: 5 (lower is better)
Translates to: LYPLVLGAARVPEIVFLGGATPG*HKYRRP
Trigger: CGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCC...TCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGGGTGGGAGTACCACTTaGGCTCGAGTATCCACTGGA +
Preference number: 5 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHEGGSTT*ARVSTG
Trigger: TCCAGTGGATACTCGAGCCAAAGTGGTACTCCCACC...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATTGCTCACCCATTTCTTaGGGCCCTGGCAGTCTCCTA +
Preference number: 5 (lower is better)
Translates to: AVEVKAAGALSIRLCLLYCSPIS*GPGSLL
Trigger: TAGGAGACTGCCAGGGCCCAAAGAAATGGGTGAGCA...ATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GGAGCTCTGAGCAGAACAGTGCTCACTGATTATCCTCTTTCCCCAACTCAGTGGCCACCTCCTCAGTGCTaGCTCAGCCCAAAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: GALSRTVLTDYPLSPTQWPPPQC*LSPKAP
Trigger: AGGAGCCTTTGGGCTGAGCAAGCACTGAGGAGGTGG...CCACTGAGTTGGGGAAAGAGGATAATCAGTGAGCACTGTTCTGCTCAGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGTGGTTTCATGCAGCTTaGACCCAGTCCTGGATCCTA +
Preference number: 5 (lower is better)
Translates to: ELLGSLRLCFWDGSAVPVWFHAA*TQSWIL
Trigger: TAGGATCCAGGACTGGGTCAAAGCTGCATGAAACCA...CACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCTGGGGGCCTTCCTCTaGTGGTGTGAGTTCCCCATT +
Preference number: 5 (lower is better)
Translates to: LSIRLCLLYPLVLGAARVLGAFL*WCEFPI
Trigger: AATGGGGAACTCACACCACAAGAGGAAGGCCCCCAG...GACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373481.7
CDS-3UTR CAA 90 bp GTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTTGGTCCCAGCCACCCTaGTTCAGTTTCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: VLGAARVPEIVFLGWVSSWSQPP*FSFCFS
Trigger: AGAGAAACAGAAACTGAACAAGGGTGGCTGGGACCA...ACTGCTGACCCATCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CCACCCTCTCCCGCCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCCCTCTCTATTAGGTaGTGTCTGCTGTATCCTCTC +
Preference number: 5 (lower is better)
Translates to: PPSPASYPLQDEAKAKTEALSIR*CLLYPL
Trigger: GAGAGGATACAGCAGACACAACCTAATAGAGAGGGC...TTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGGCGGGAGAGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGCCCTCTCTATTAGGTaGTGTCTGCTGTATCCTCTC +
Preference number: 5 (lower is better)
Translates to: DEAKAKTEAATARGEPIRALSIR*CLLYPL
Trigger: GAGAGGATACAGCAGACACAACCTAATAGAGAGGGC...CCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTGAGGACAGGAGCAACACCAGGCTTGCATAAGTATCGAAGGCCGTGGAGGTTAGGAGCAACACCAGGCTaGCATAAGTATCGAAGGCCG +
Preference number: 5 (lower is better)
Translates to: LRTGATPGLHKYRRPWRLGATPG*HKYRRP
Trigger: CGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCC...TAACCTCCACGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCCTGTCCTCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp TATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCCATGTAAACAGGCCCTaGGAATGCAACTTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: YRRPWRLRLQAPSLLGCVHVNRP*ECNFLG
Trigger: GCCCAGGAAGTTGCATTCCAAGGGCCTGTTTACATG...GACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp TGCTGCCATGTAAACAGGCCCTTGGAATGCAACTTCCTGGGCCCTGGAGGATGGACTGGGTGCCCCTCATaGACTAGAGAAGACTTGAGT +
Preference number: 5 (lower is better)
Translates to: CCHVNRPLECNFLGPGGWTGCPS*TREDLS
Trigger: ACTCAAGTCTTCTCTAGTCAATGAGGGGCACCCAGT...CCATCCTCCAGGGCCCAGGAAGTTGCATTCCAAGGGCCTGTTTACATGGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp AAAAATCAGAGGCTTTTGGTCTCTCCATTTACTCTAGGTCAAGCTCATTTACCCCCCGCCGCCTTCTTCTaGCGCCGCTTGCCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: KNQRLLVSPFTLGQAHLPPAAFF*RRLPRS
Trigger: GCTGCGGGGCAAGCGGCGCAAGAAGAAGGCGGCGGG...GGGTAAATGAGCTTGACCTAGAGTAAATGGAGAGACCAAAAGCCTCTGATTTTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS-3UTR CAA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCATCTTTCTGTGAGTCTTaGCGCTGGATCATCTCCGAG +
Preference number: 5 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPSFCES*RWIISE
Trigger: CTCGGAGATGATCCAGCGCAAAGACTCACAGAAAGA...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294521.7
CDS-3UTR CAA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGCCTGACTTTCCAGATTaGGGAAATGAGTCATGGGGT +
Preference number: 5 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRPDFPD*GNESWG
Trigger: ACCCCATGACTCATTTCCCAAATCTGGAAAGTCAGG...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCATGTAAACAGGCCCTaGGAATGCAACTTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: VKAAGALSIRLCLLYPLVHVNRP*ECNFLG
Trigger: GCCCAGGAAGTTGCATTCCAAGGGCCTGTTTACATG...GACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAGCCTTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp AGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGACATGTAAACAGGCCCTaGGAATGCAACTTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: SYPLQDEAKAKTEAATARHVNRP*ECNFLG
Trigger: GCCCAGGAAGTTGCATTCCAAGGGCCTGTTTACATG...TCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGGATGGGAACACAATGACTaGGCCACCTTCAGGAACCAA +
Preference number: 5 (lower is better)
Translates to: LYPLVLGAARVPEIVFLGWEHND*ATFRNQ
Trigger: TTGGTTCCTGAAGGTGGCCAAGTCATTGTGTTCCCA...TCCCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTGCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGTGCACCTTTTGTGCTTaGGAATTCCACAGCCCCACA +
Preference number: 5 (lower is better)
Translates to: LQAPSLLGCVCCILSSLECTFCA*EFHSPT
Trigger: TGTGGGGCTGTGGAATTCCAAAGCACAAAAGGTGCA...CTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GGAGCTCTGAGCAGAACAGTGCTCACTGATTATCCTCTTTCCCCAACTCAGTGGTGCTCACCCATTTCTTaGGGCCCTGGCAGTCTCCTA +
Preference number: 5 (lower is better)
Translates to: GALSRTVLTDYPLSPTQWCSPIS*GPGSLL
Trigger: TAGGAGACTGCCAGGGCCCAAAGAAATGGGTGAGCA...CCACTGAGTTGGGGAAAGAGGATAATCAGTGAGCACTGTTCTGCTCAGAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTACTGGGTGCCCCTCATaGACTAGAGAAGACTTGAGT +
Preference number: 5 (lower is better)
Translates to: AGALSIRLCLLYPLVLGATGCPS*TREDLS
Trigger: ACTCAAGTCTTCTCTAGTCAATGAGGGGCACCCAGT...AGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGTGTCAACCTCTCTCCTaGGTGGTGAAGCTAAAAGCA +
Preference number: 5 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRCQPLS*VVKLKA
Trigger: TGCTTTTAGCTTCACCACCAAGGAGAGAGGTTGACA...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp TCCCTGAGATTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTGCCTGGTGTGTCAACCTCTCTCCTaGGTGGTGAAGCTAAAAGCA +
Preference number: 5 (lower is better)
Translates to: SLRLCFWDGSAVPVRCLVCQPLS*VVKLKA
Trigger: TGCTTTTAGCTTCACCACCAAGGAGAGAGGTTGACA...CACCAGGCACCTCACTGGCACTGCTGACCCATCCCAGAAACACAATCTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCGCAGGATGACTCTGAGGCCTACACTTAGATGTTaGTCATTCTCAGCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LPEVNPFGKRHERRMTLRPTLRC*SFSALA
Trigger: TGCCAAGGCTGAGAATGACAAACATCTAAGTGTAGG...CCTCAGAGTCATCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp AAGTATCGAAGGCCGTGGAGGTTAAGGCTGCAGGCGCCCTCTCTATTAGGTTGTTGGTCCCAGCCACCCTaGTTCAGTTTCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: KYRRPWRLRLQAPSLLGCWSQPP*FSFCFS
Trigger: AGAGAAACAGAAACTGAACAAGGGTGGCTGGGACCA...ACAACCTAATAGAGAGGGCGCCTGCAGCCTTAACCTCCACGGCCTTCGATACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCTGGTCCCAGCCACCCTaGTTCAGTTTCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LSIRLCLLYPLVLGAARVWSQPP*FSFCFS
Trigger: AGAGAAACAGAAACTGAACAAGGGTGGCTGGGACCA...GACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp TCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTTGGTCCCAGCCACCCTaGTTCAGTTTCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: SIRLCLLYPLVLGAARVPWSQPP*FSFCFS
Trigger: AGAGAAACAGAAACTGAACAAGGGTGGCTGGGACCA...AGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATTCGGGAAAAGGCATGAGCCTGACTTTCCAGATTaGGGAAATGAGTCATGGGGT +
Preference number: 5 (lower is better)
Translates to: PRLKRQLPEVNPFGKRHEPDFPD*GNESWG
Trigger: ACCCCATGACTCATTTCCCAAATCTGGAAAGTCAGG...CTCATGCCTTTTCCCGAATGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATGCACCTTTTGTGCTTaGGAATTCCACAGCCCCACA +
Preference number: 5 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPCTFCA*EFHSPT
Trigger: TGTGGGGCTGTGGAATTCCAAAGCACAAAAGGTGCA...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTTGATTCTGGACTAAGGGTGGTTGGTGAGTaGAGGCACAGGAAGGCCAAT +
Preference number: 5 (lower is better)
Translates to: ALEDGHAATFQKCFDSGLRVVGE*RHRKAN
Trigger: ATTGGCCTTCCTGTGCCTCAACTCACCAACCACCCT...TAGTCCAGAATCAAAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTTGATTCTGGACTATGCTCACCCATTTCTTaGGGCCCTGGCAGTCTCCTA +
Preference number: 5 (lower is better)
Translates to: ALEDGHAATFQKCFDSGLCSPIS*GPGSLL
Trigger: TAGGAGACTGCCAGGGCCCAAAGAAATGGGTGAGCA...TAGTCCAGAATCAAAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGCTCTGTCAACCTCTCTCCTaGGTGGTGAAGCTAAAAGCA +
Preference number: 5 (lower is better)
Translates to: APSLLGCVCCILSSLELLCQPLS*VVKLKA
Trigger: TGCTTTTAGCTTCACCACCAAGGAGAGAGGTTGACA...GAGCAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp TTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTGAACCCATGGTTTCATGCAGCTTaGACCCAGTCCTGGATCCTA +
Preference number: 5 (lower is better)
Translates to: FKMRLRPRLKRQLPEVNPWFHAA*TQSWIL
Trigger: TAGGATCCAGGACTGGGTCAAAGCTGCATGAAACCA...TGGGTTCACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp TGCAACTTCCTGGGCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTTGGTTTCATGCAGCTTaGACCCAGTCCTGGATCCTA +
Preference number: 5 (lower is better)
Translates to: CNFLGPGGWPCSHFSKVLWFHAA*TQSWIL
Trigger: TAGGATCCAGGACTGGGTCAAAGCTGCATGAAACCA...AAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGCCCAGGAAGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp TGCTGTATCCTCTCGTCCTTGGAGCTGCTCGGGTCCCTGAGATTGTGTTTCTGGCCTACACTTAGATGTTaGTCATTCTCAGCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: CCILSSLELLGSLRLCFWPTLRC*SFSALA
Trigger: TGCCAAGGCTGAGAATGACAAACATCTAAGTGTAGG...CCAGAAACACAATCTCAGGGACCCGAGCAGCTCCAAGGACGAGAGGATACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GCAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTCCTACACTTAGATGTTaGTCATTCTCAGCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: AGALSIRLCLLYPLVLGAPTLRC*SFSALA
Trigger: TGCCAAGGCTGAGAATGACAAACATCTAAGTGTAGG...AGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GCACCTGTGGCTTCCCATCCTTGTCACTCAGCGTTAGCTGCCCCCAGTGGAACCAAAAATCAGAGGCTTTaGGTCTCTCCATTTACTCTA +
Preference number: 5 (lower is better)
Translates to: APVASHPCHSALAAPSGTKNQRL*VSPFTL
Trigger: TAGAGTAAATGGAGAGACCAAAAGCCTCTGATTTTT...GGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp AGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGACCTACACTTAGATGTTaGTCATTCTCAGCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: SYPLQDEAKAKTEAATARPTLRC*SFSALA
Trigger: TGCCAAGGCTGAGAATGACAAACATCTAAGTGTAGG...TCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GCACAGGCTGAAAATAGAAAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCGGAGCAACACCAGGCTaGCATAAGTATCGAAGGCCG +
Preference number: 5 (lower is better)
Translates to: AQAENRKVNIPGEYSKRGGATPG*HKYRRP
Trigger: CGGCCTTCGATACTTATGCAAGCCTGGTGTTGCTCC...GCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTCAGCCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GGAGCTCTGAGCAGAACAGTGCTCACTGATTATCCTCTTTCCCCAACTCAGTGGCCTGACTTTCCAGATTaGGGAAATGAGTCATGGGGT +
Preference number: 5 (lower is better)
Translates to: GALSRTVLTDYPLSPTQWPDFPD*GNESWG
Trigger: ACCCCATGACTCATTTCCCAAATCTGGAAAGTCAGG...CCACTGAGTTGGGGAAAGAGGATAATCAGTGAGCACTGTTCTGCTCAGAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp GCACAGGCTGAAAATAGAAAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCGGTGGGAGTACCACTTaGGCTCGAGTATCCACTGGA +
Preference number: 5 (lower is better)
Translates to: AQAENRKVNIPGEYSKRGGGSTT*ARVSTG
Trigger: TCCAGTGGATACTCGAGCCAAAGTGGTACTCCCACC...GCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTCAGCCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CAGGCGCCCTCTCTATTAGGTTGTGTCTGCTGTATCCTCTCGTCCTTGGAGCTGTTGACTAGAGAAGACTaGAGTAAAATGCACCTGTGG +
Preference number: 5 (lower is better)
Translates to: QAPSLLGCVCCILSSLELLTRED*SKMHLW
Trigger: CCACAGGTGCATTTTACTCAAGTCTTCTCTAGTCAA...CAGCTCCAAGGACGAGAGGATACAGCAGACACAACCTAATAGAGAGGGCGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp AAAAATCAGAGGCTTTTGGTCTCTCCATTTACTCTAGGTCAAGCTCATTTACCCCTGGCAGTCTCCTACTaGTCCCCAGCATGGAGCACC +
Preference number: 5 (lower is better)
Translates to: KNQRLLVSPFTLGQAHLPLAVSY*SPAWST
Trigger: GGTGCTCCATGCTGGGGACAAGTAGGAGACTGCCAG...GGGTAAATGAGCTTGACCTAGAGTAAATGGAGAGACCAAAAGCCTCTGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp TACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAGAGGTTTGACTAGAGAAGACTaGAGTAAAATGCACCTGTGG +
Preference number: 5 (lower is better)
Translates to: YPLQDEAKAKTEAATARGLTRED*SKMHLW
Trigger: CCACAGGTGCATTTTACTCAAGTCTTCTCTAGTCAA...ACCTCTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp AAAAATCAGAGGCTTTTGGTCTCTCCATTTACTCTAGGTCAAGCTCATTTACCCAATGGGGAAGCCAGCTaGCCTAGACAGGTGGCACAG +
Preference number: 5 (lower is better)
Translates to: KNQRLLVSPFTLGQAHLPNGEAS*PRQVAQ
Trigger: CTGTGCCACCTGTCTAGGCAAGCTGGCTTCCCCATT...GGGTAAATGAGCTTGACCTAGAGTAAATGGAGAGACCAAAAGCCTCTGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp CCAGCTACCCACTTCAAGATGAGGCTAAGGCCAAGACTGAAGCGGCAACTGCCAAAAAATCAGAGGCTTTaGGTCTCTCCATTTACTCTA +
Preference number: 5 (lower is better)
Translates to: PATHFKMRLRPRLKRQLPKNQRL*VSPFTL
Trigger: TAGAGTAAATGGAGAGACCAAAAGCCTCTGATTTTT...TGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTGAAGTGGGTAGCTGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS TCA 90 bp ACGAATGTGCAAGAGGACACAGGGTACTGTGTTTCCCGAATTCATTaGATCAGAGAGCCTGGTGAAACACTGGATAAGGAGGAAAAGAAG +
Preference number: 5 (lower is better)
Translates to: TNVQEDTGYCVSRIH*IREPGETLDKEEKK
Trigger: CTTCTTTTCCTCCTTATCCAGTGTTTCACCAGGCTCTCTGATTCAATGAATTCGGGAAACACAGTACCCTGTGTCCTCTTGCACATTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468130.1
CDS-3UTR CAA 90 bp GCCCTGGAGGATGGCCATGCAGCCACTTTTCAAAAGTGCTTTGATTCTGGACTAAAAAATCAGAGGCTTTaGGTCTCTCCATTTACTCTA +
Preference number: 5 (lower is better)
Translates to: ALEDGHAATFQKCFDSGLKNQRL*VSPFTL
Trigger: TAGAGTAAATGGAGAGACCAAAAGCCTCTGATTTTT...TAGTCCAGAATCAAAGCACTTTTGAAAAGTGGCTGCATGGCCATCCTCCAGGGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS-3UTR CAA 90 bp AAAAATCAGAGGCTTTTGGTCTCTCCATTTACTCTAGGTCAAGCTCATTTACCCTTGACTAGAGAAGACTaGAGTAAAATGCACCTGTGG +
Preference number: 5 (lower is better)
Translates to: KNQRLLVSPFTLGQAHLPLTRED*SKMHLW
Trigger: CCACAGGTGCATTTTACTCAAGTCTTCTCTAGTCAA...GGGTAAATGAGCTTGACCTAGAGTAAATGGAGAGACCAAAAGCCTCTGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS TCA 72 bp CCGCCTTCTTCTTGCGCCGCTTGCCCCGCAGCCAGCTaGAGGCGCGGCGGAGGCCGGACGCGCCGGAGCGGG +
Preference number: 6 (lower is better)
Translates to: PPSSCAACPAAS*RRGGGRTRRSG
Trigger: CCCGCTCCGGCGCGTCCGGCCTCCGCCGCGCCTTCAGCTGGCTGCGGGGCAAGCGGCGCAAGAAGAAGGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS GCA 72 bp CCGGCCGCTTCGCCGACCGCCCGAACCGCCAGAAGCTaGGGACCCGGGGACCGCTGGGGGCCTTCCTCTTGT +
Preference number: 6 (lower is better)
Translates to: PAASPTARTARS*GPGDRWGPSSC
Trigger: ACAAGAGGAAGGCCCCCAGCGGTCCCCGGGTCCGCAGCTTCTGGCGGTTCGGGCGGTCGGCGAAGCGGCCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373481.7
ENST00000468130.1
CDS TCA 72 bp CGGAGCGCAGCCGCACCATCTGCAGGAGCGAGGGCGTaGCCAGGGGCGCACCTACGTCCTCCCTGGGAGGCC +
Preference number: 6 (lower is better)
Translates to: RSAAAPSAGARA*PGAHLRPPWEA
Trigger: GGCCTCCCAGGGAGGACGTAGGTGCGCCCCTGGTCACGCCCTCGCTCCTGCAGATGGTGCGGCTGCGCTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS GCA 72 bp GCGGCCGTCCACTGTGGGGATGCGTACGGCATCCCGTaGACCAGGAGCCCGGGGCGTGCCTGGTGCCTCACG +
Preference number: 6 (lower is better)
Translates to: AAVHCGDAYGIP*TRSPGRAWCLT
Trigger: CGTGAGGCACCAGGCACGCCCCGGGCTCCTGGTGCACGGGATGCCGTACGCATCCCCACAGTGGACGGCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS GCA 72 bp CCTCCTGGAGCACCCACGGAGCGCAGCCGCACCATCTaGAGGAGCGAGGGCGTGACCAGGGGCGCACCTACG +
Preference number: 6 (lower is better)
Translates to: PPGAPTERSRTI*RSEGVTRGAPT
Trigger: CGTAGGTGCGCCCCTGGTCACGCCCTCGCTCCTGCAGATGGTGCGGCTGCGCTCCGTGGGTGCTCCAGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 72 bp CCATCCCTGAGGTGCCTCGGGGGCGGCCGTCCACTGTaGGGATGCGTACGGCATCCCGTGCACCAGGAGCCC +
Preference number: 6 (lower is better)
Translates to: PSLRCLGGGRPL*GCVRHPVHQEP
Trigger: GGGCTCCTGGTGCACGGGATGCCGTACGCATCCCCACAGTGGACGGCCGCCCCCGAGGCACCTCAGGGATGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS GCA 72 bp CTGGGCTGGCCGAGTGCAGGCTGCAGCGGCTTAGTGTaGGCAGGCTGCAGCGGCCTAGGGCCACCACGTCCA +
Preference number: 6 (lower is better)
Translates to: LGWPSAGCSGLV*AGCSGLGPPRP
Trigger: TGGACGTGGTGGCCCTAGGCCGCTGCAGCCTGCGCACACTAAGCCGCTGCAGCCTGCACTCGGCCAGCCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS TCA 72 bp GGAGCGCCGGGAGGCGGCGGCCAACGAACACCACCATaGCTGCGGGCGCCACTCGAGACGTTCCCTATCCCA +
Preference number: 6 (lower is better)
Translates to: GAPGGGGQRTPP*LRAPLETFPIP
Trigger: TGGGATAGGGAACGTCTCGAGTGGCGCCCGCAGTCATGGTGGTGTTCGTTGGCCGCCGCCTCCCGGCGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294521.7
ENST00000373480.1
CDS TCA 72 bp GGAGGCCGTGGCTCTGCCTCAGGCGGTCCGTTGGGCTaGGCACTTGAGAGGCCTTCACTGGCGGCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: GGRGSASGGPLG*ALERPSLAARL
Trigger: CAGCCTGGCCGCCAGTGAAGGCCTCTCAAGTGCTCAGCCCAACGGACCGCCTGAGGCAGAGCCACGGCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS GCA 72 bp CGCCGGGAGGCGGCGGCCAACGAACACCACCATGACTaGGGGCGCCACTCGAGACGTTCCCTATCCCACCCT +
Preference number: 6 (lower is better)
Translates to: RREAAANEHHHD*GRHSRRSLSHP
Trigger: AGGGTGGGATAGGGAACGTCTCGAGTGGCGCCCGCAGTCATGGTGGTGTTCGTTGGCCGCCGCCTCCCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294521.7
ENST00000373480.1
CDS GCA 72 bp GCTCCTTCTGCACATGCTGCGGGAGTCCCAGCACAGTaGTCCGCCGCTCCCGCCGACGCCGCCCTGACTTTC +
Preference number: 6 (lower is better)
Translates to: APSAHAAGVPAQ*SAAPADAALTF
Trigger: GAAAGTCAGGGCGGCGTCGGCGGGAGCGGCGGAGCACTGTGCTGGGACTCCCGCAGCATGTGCAGAAGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 72 bp GAGCGCGGGGCGTACCTTCACTGTAACCCAGCACTATaGGGATGCGAGCCCTCCCGCCCCGCCGCAGAGCAC +
Preference number: 6 (lower is better)
Translates to: ERGAYLHCNPAL*GCEPSRPAAEH
Trigger: GTGCTCTGCGGCGGGGCGGGAGGGCTCGCATCCCCATAGTGCTGGGTTACAGTGAAGGTACGCCCCGCGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294521.7
CDS CCA 72 bp CGTGACACGCTCTGGTTTAGGGGGCTGGGCCTTGCCTaGGGAAGCAGGGGGACCTGCCAGGCCCTTGGGAGG +
Preference number: 6 (lower is better)
Translates to: RDTLWFRGLGLA*GSRGTCQALGR
Trigger: CCTCCCAAGGGCCTGGCAGGTCCCCCTGCTTCCCCAGGCAAGGCCCAGCCCCCTAAACCAGAGCGTGTCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS GCA 72 bp GGCATCCCGTGCACCAGGAGCCCGGGGCGTGCCTGGTaGCTCACGCTCATTCCTCAGGCCAAGCTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: GIPCTRSPGRAW*LTLIPQAKLLL
Trigger: CAGAAGGAGCTTGGCCTGAGGAATGAGCGTGAGGCACCAGGCACGCCCCGGGCTCCTGGTGCACGGGATGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 72 bp ACCACCCGGAGACAAGCCAGGTACCCAGCTGTTGGCTaGGTTGGGTGGACAGGGTGCTGCCCCCGCCCCTTC +
Preference number: 6 (lower is better)
Translates to: TTRRQARYPAVG*VGWTGCCPRPF
Trigger: GAAGGGGCGGGGGCAGCACCCTGTCCACCCAACCCAGCCAACAGCTGGGTACCTGGCTTGTCTCCGGGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 72 bp CGGAGTTCTGCCACCAGATTCCGCTGGAGGTCAGCCTaGGTCTCAGGGGACACGGGCCGCTCCAGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: RSSATRFRWRSA*VSGDTGRSSCS
Trigger: GCTGCAGCTGGAGCGGCCCGTGTCCCCTGAGACCCAGGCTGACCTCCAGCGGAATCTGGTGGCAGAACTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 72 bp TACGGCATCCCGTGCACCAGGAGCCCGGGGCGTGCCTaGTGCCTCACGCTCATTCCTCAGGCCAAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: YGIPCTRSPGRA*CLTLIPQAKLL
Trigger: AAGGAGCTTGGCCTGAGGAATGAGCGTGAGGCACCAGGCACGCCCCGGGCTCCTGGTGCACGGGATGCCGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 72 bp TCTGAGATGCTCCGGAGTTCTGCCACCAGATTCCGCTaGAGGTCAGCCTGGGTCTCAGGGGACACGGGCCGC +
Preference number: 6 (lower is better)
Translates to: SEMLRSSATRFR*RSAWVSGDTGR
Trigger: GCGGCCCGTGTCCCCTGAGACCCAGGCTGACCTCCAGCGGAATCTGGTGGCAGAACTCCGGAGCATCTCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS TCA 72 bp GGCGGAGCTGGAGGAGGGTCTGGGCTACCCGGGGGCTaGATCTGCAAAGCAGTAGCTGAGGAGGACGAAGCA +
Preference number: 6 (lower is better)
Translates to: GGAGGGSGLPGG*ICKAVAEEDEA
Trigger: TGCTTCGTCCTCCTCAGCTACTGCTTTGCAGATTCAGCCCCCGGGTAGCCCAGACCCTCCTCCAGCTCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CAA 72 bp CGCCGCTCCCGCCGACGCCGCCCTGACTTTCCAGATTaGGGAAATGAGTCATGGGGTCGGAAGGTGGAGCCT +
Preference number: 6 (lower is better)
Translates to: RRSRRRRPDFPD*GNESWGRKVEP
Trigger: AGGCTCCACCTTCCGACCCCATGACTCATTTCCCAAATCTGGAAAGTCAGGGCGGCGTCGGCGGGAGCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CAA 72 bp GACCCTGGCCCCTGGCCAGGCCCTACACTTAGATGTTaGTCATTCTCAGCCTTGGCAGAGCCTGCCGGCCGC +
Preference number: 6 (lower is better)
Translates to: DPGPWPGPTLRC*SFSALAEPAGR
Trigger: GCGGCCGGCAGGCTCTGCCAAGGCTGAGAATGACAAACATCTAAGTGTAGGGCCTGGCCAGGGGCCAGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373481.7
ENST00000468130.1
CDS CAA 90 bp ACAGTGCTCCGCCGCTCCCGCCGACGCCGCCCTGACTTTCCAGATTaGGGAAATGAGTCATGGGGTCGGAAGGTGGAGCCTTTGCGCTGG +
Preference number: 6 (lower is better)
Translates to: TVLRRSRRRRPDFPD*GNESWGRKVEPLRW
Trigger: CCAGCGCAAAGGCTCCACCTTCCGACCCCATGACTCATTTCCCAAATCTGGAAAGTCAGGGCGGCGTCGGCGGGAGCGGCGGAGCACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CAA 90 bp TCCACTGCAGACCCTGGCCCCTGGCCAGGCCCTACACTTAGATGTTaGTCATTCTCAGCCTTGGCAGAGCCTGCCGGCCGCTTCGCCGAC +
Preference number: 6 (lower is better)
Translates to: STADPGPWPGPTLRC*SFSALAEPAGRFAD
Trigger: GTCGGCGAAGCGGCCGGCAGGCTCTGCCAAGGCTGAGAATGACAAACATCTAAGTGTAGGGCCTGGCCAGGGGCCAGGGTCTGCAGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373481.7
ENST00000468130.1
CDS CAA 90 bp CCCAATGGAGCCCACTGTCCCTCTCCCCTGCCCATGAATCCACCTTaGCGCTGGATCATCTCCGAGCGGATGGAGAGCGCGTCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: PNGAHCPSPLPMNPP*RWIISERMESASSA
Trigger: AGCAGAGGACGCGCTCTCCATCCGCTCGGAGATGATCCAGCGCAAAGGTGGATTCATGGGCAGGGGAGAGGGACAGTGGGCTCCATTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468130.1
CDS TCA 72 bp TGGGCTACCCGGGGGCTGAATCTGCAAAGCAGTAGCTaGGGAGGACGAAGCAGCCGGGGAGCTGACAAGCTC +
Preference number: 6 (lower is better)
Translates to: WATRGLNLQSSS*GGRSSRGADKL
Trigger: GAGCTTGTCAGCTCCCCGGCTGCTTCGTCCTCCTCAGCTACTGCTTTGCAGATTCAGCCCCCGGGTAGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 72 bp GAGATGTTGTCTTCATCCGGCCCCGTCCGGGAGGACTaGATACTCTGGGTGTCTCCATGGTCCCAGCCACCC +
Preference number: 6 (lower is better)
Translates to: EMLSSSGPVRED*ILWVSPWSQPP
Trigger: GGGTGGCTGGGACCATGGAGACACCCAGAGTATCCAGTCCTCCCGGACGGGGCCGGATGAAGACAACATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
ENST00000468130.1
CDS CCA 72 bp AGGTGGAGCCTTTGCGCTGGATCATCTCCGAGCGGATaGAGAGCGCGTCCTCTGCTGTGGAGCTCTCAGCCA +
Preference number: 6 (lower is better)
Translates to: RWSLCAGSSPSG*RARPLLWSSQP
Trigger: TGGCTGAGAGCTCCACAGCAGAGGACGCGCTCTCCATCCGCTCGGAGATGATCCAGCGCAAAGGCTCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 72 bp GCCGCTCCCGCCGACGCCGCCCTGACTTTCCAGATTTaGGAAATGAGTCATGGGGTCGGAAGGTGGAGCCTT +
Preference number: 6 (lower is better)
Translates to: AAPADAALTFQI*EMSHGVGRWSL
Trigger: AAGGCTCCACCTTCCGACCCCATGACTCATTTCCCAAATCTGGAAAGTCAGGGCGGCGTCGGCGGGAGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 72 bp GGAGGGTGGGAGTACCACTTTGGCTCGAGTATCCACTaGAGGGCGAAAGTGTCCGTTCTGGGGACCGTGGGG +
Preference number: 6 (lower is better)
Translates to: GGWEYHFGSSIH*RAKVSVLGTVG
Trigger: CCCCACGGTCCCCAGAACGGACACTTTCGCCCTCCAGTGGATACTCGAGCCAAAGTGGTACTCCCACCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CAA 90 bp GGCCCCTGGCCAGGCCCTACACTTAGATGTTTGTCATTCTCAGCCTaGGCAGAGCCTCGGCCTTTGCCCTTGGCCCTCTTGGCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: GPWPGPTLRCLSFSA*AEPRPLPLALLALS
Trigger: GGACAAGGCCAAGAGGGCCAAGGGCAAAGGCCGAGGCTCTGCCAAGGCTGAGAATGACAAACATCTAAGTGTAGGGCCTGGCCAGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS TCA 72 bp GACCCAATGGAGCCCACTGTCCCTCTCCCCTGCCCATaGATCCACCTTTGCGCTGGATCATCTCCGAGCGGA +
Preference number: 6 (lower is better)
Translates to: DPMEPTVPLPCP*IHLCAGSSPSG
Trigger: TCCGCTCGGAGATGATCCAGCGCAAAGGTGGATTCATGGGCAGGGGAGAGGGACAGTGGGCTCCATTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468130.1
CDS GCA 72 bp CTGGATCATCTCCGAGCGGATGGAGAGCGCGTCCTCTaGTGTGGAGCTCTCAGCCACGTAGGATGTGGTCTG +
Preference number: 6 (lower is better)
Translates to: LDHLRADGERVL*CGALSHVGCGL
Trigger: CAGACCACATCCTACGTGGCTGAGAGCTCCACAGCAGAGGACGCGCTCTCCATCCGCTCGGAGATGATCCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
ENST00000468130.1
CDS CCA 72 bp TCTTCATCCGGCCCCGTCCGGGAGGACTGGATACTCTaGGTGTCTCCATGGTCCCAGCCACCCTTGTTCAGT +
Preference number: 6 (lower is better)
Translates to: SSSGPVREDWIL*VSPWSQPPLFS
Trigger: ACTGAACAAGGGTGGCTGGGACCATGGAGACACCCAGAGTATCCAGTCCTCCCGGACGGGGCCGGATGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
ENST00000468130.1
CDS CCA 72 bp TCATCTCCGAGCGGATGGAGAGCGCGTCCTCTGCTGTaGAGCTCTCAGCCACGTAGGATGTGGTCTGACTGC +
Preference number: 6 (lower is better)
Translates to: SSPSGWRARPLL*SSQPRRMWSDC
Trigger: GCAGTCAGACCACATCCTACGTGGCTGAGAGCTCCACAGCAGAGGACGCGCTCTCCATCCGCTCGGAGATGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
ENST00000468130.1
CDS CCA 72 bp TGTCCCTCTCCCCTGCCCATGAATCCACCTTTGCGCTaGATCATCTCCGAGCGGATGGAGAGCGCGTCCTCT +
Preference number: 6 (lower is better)
Translates to: CPSPLPMNPPLR*IISERMESASS
Trigger: AGAGGACGCGCTCTCCATCCGCTCGGAGATGATCCAGCGCAAAGGTGGATTCATGGGCAGGGGAGAGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468130.1
CDS GCA 72 bp GTTTGTCATTCTCAGCCTTGGCAGAGCCTCGGCCTTTaGCCTTGGCCCTCTTGGCCTTGTCCTCCGCCTTCT +
Preference number: 6 (lower is better)
Translates to: VCHSQPWQSLGL*PWPSWPCPPPS
Trigger: AGAAGGCGGAGGACAAGGCCAAGAGGGCCAAGGGCAAAGGCCGAGGCTCTGCCAAGGCTGAGAATGACAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS CCA 72 bp TCTGTGAGTCTTTGCGCTGGATCATCTCCGAGCGGATaGAGAGCGCGTCCTCTGCTGTGGAGCTCTCAGCCA +
Preference number: 6 (lower is better)
Translates to: SVSLCAGSSPSG*RARPLLWSSQP
Trigger: TGGCTGAGAGCTCCACAGCAGAGGACGCGCTCTCCATCCGCTCGGAGATGATCCAGCGCAAAGACTCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294521.7
CDS CAA 72 bp TGTTTGTCATTCTCAGCCTTGGCAGAGCCTCGGCCTTaGCCCTTGGCCCTCTTGGCCTTGTCCTCCGCCTTC +
Preference number: 6 (lower is better)
Translates to: CLSFSALAEPRP*PLALLALSSAF
Trigger: GAAGGCGGAGGACAAGGCCAAGAGGGCCAAGGGCAAAGGCCGAGGCTCTGCCAAGGCTGAGAATGACAAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS CAA 72 bp GACCCTGGCCCCTGGCCAGGCCCTACACTTAGATGTTaGTCATTCTCAGCCTTGGCAGAGCCTCGGCCTTTG +
Preference number: 6 (lower is better)
Translates to: DPGPWPGPTLRC*SFSALAEPRPL
Trigger: CAAAGGCCGAGGCTCTGCCAAGGCTGAGAATGACAAACATCTAAGTGTAGGGCCTGGCCAGGGGCCAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS CAA 90 bp CTTAGAGGAGAGGGTGGAACCGTCAGACACAATGGTGTCGGAGGATaGAGAGTGGCTCCAGGTGTCACTGGAGGAGGATGGGTGGCGGCT +
Preference number: 6 (lower is better)
Translates to: LRGEGGTVRHNGVGG*RVAPGVTGGGWVAA
Trigger: AGCCGCCACCCATCCTCCTCCAGTGACACCTGGAGCCACTCTCAATCCTCCGACACCATTGTGTCTGACGGTTCCACCCTCTCCTCTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CAA 90 bp ACACTTAGATGTTTGTCATTCTCAGCCTTGGCAGAGCCTCGGCCTTaGCCCTTGGCCCTCTTGGCCTTGTCCTCCGCCTTCTTGGCCCGG +
Preference number: 6 (lower is better)
Translates to: TLRCLSFSALAEPRP*PLALLALSSAFLAR
Trigger: CCGGGCCAAGAAGGCGGAGGACAAGGCCAAGAGGGCCAAGGGCAAAGGCCGAGGCTCTGCCAAGGCTGAGAATGACAAACATCTAAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS GCA 72 bp CTGTGGAGCTCTCAGCCACGTAGGATGTGGTCTGACTaGAGAAGGAGATGTTGTCTTCATCCGGCCCCGTCC +
Preference number: 6 (lower is better)
Translates to: LWSSQPRRMWSD*RRRCCLHPAPS
Trigger: GGACGGGGCCGGATGAAGACAACATCTCCTTCTGCAGTCAGACCACATCCTACGTGGCTGAGAGCTCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
ENST00000468130.1
CDS GCA 72 bp TTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTaGCTGGTGGTCAGGCCAGCTCTTTCTGTGAGTCTG +
Preference number: 6 (lower is better)
Translates to: LCFWDGSAVPVR*LVVRPALSVSL
Trigger: CAGACTCACAGAAAGAGCTGGCCTGACCACCAGGCACCTCACTGGCACTGCTGACCCATCCCAGAAACACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 72 bp CCCGTCCGGGAGGACTGGATACTCTGGGTGTCTCCATaGTCCCAGCCACCCTTGTTCAGTTTCTGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: PVREDWILWVSP*SQPPLFSFCFS
Trigger: AGAGAAACAGAAACTGAACAAGGGTGGCTGGGACCATGGAGACACCCAGAGTATCCAGTCCTCCCGGACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
ENST00000468130.1
CDS CCA 72 bp CGCCGCCCTGACTTTCCAGATTTGGGAAATGAGTCATaGGGTCGGAAGGTGGAGCCTTTGCGCTGGATCATC +
Preference number: 6 (lower is better)
Translates to: RRPDFPDLGNES*GRKVEPLRWII
Trigger: GATGATCCAGCGCAAAGGCTCCACCTTCCGACCCCATGACTCATTTCCCAAATCTGGAAAGTCAGGGCGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
CDS CCA 72 bp CAGGCCCTACACTTAGATGTTTGTCATTCTCAGCCTTaGCAGAGCCTCGGCCTTTGCCCTTGGCCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: QALHLDVCHSQP*QSLGLCPWPSW
Trigger: CCAAGAGGGCCAAGGGCAAAGGCCGAGGCTCTGCCAAGGCTGAGAATGACAAACATCTAAGTGTAGGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401073.7
CDS CAA 90 bp TCCACTGCAGACCCTGGCCCCTGGCCAGGCCCTACACTTAGATGTTaGTCATTCTCAGCCTTGGCAGAGCCCTTCTTCTTAAACAGCCCT +
Preference number: 6 (lower is better)
Translates to: STADPGPWPGPTLRC*SFSALAEPFFLNSP
Trigger: AGGGCTGTTTAAGAAGAAGGGCTCTGCCAAGGCTGAGAATGACAAACATCTAAGTGTAGGGCCTGGCCAGGGGCCAGGGTCTGCAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294521.7
ENST00000373480.1
CDS GCA 72 bp TTGTGTTTCTGGGATGGGTCAGCAGTGCCAGTGAGGTaGCTGGTGGTCAGGCCAGCTCTTTCTGTGAGTCTT +
Preference number: 6 (lower is better)
Translates to: LCFWDGSAVPVR*LVVRPALSVSL
Trigger: AAGACTCACAGAAAGAGCTGGCCTGACCACCAGGCACCTCACTGGCACTGCTGACCCATCCCAGAAACACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294521.7
CDS CCA 72 bp TTGTCCTGGTGCTCATCCACTGCAGACCCTGGCCCCTaGCCAGGCCCTACACTTAGATGTTTGTCATTCTCA +
Preference number: 6 (lower is better)
Translates to: LSWCSSTADPGP*PGPTLRCLSFS
Trigger: TGAGAATGACAAACATCTAAGTGTAGGGCCTGGCCAGGGGCCAGGGTCTGCAGTGGATGAGCACCAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
ENST00000468130.1
CDS CCA 72 bp CGTCCTCTGCTGTGGAGCTCTCAGCCACGTAGGATGTaGTCTGACTGCAGAAGGAGATGTTGTCTTCATCCG +
Preference number: 6 (lower is better)
Translates to: RPLLWSSQPRRM*SDCRRRCCLHP
Trigger: CGGATGAAGACAACATCTCCTTCTGCAGTCAGACCACATCCTACGTGGCTGAGAGCTCCACAGCAGAGGACG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
ENST00000468130.1
CDS CAA 72 bp GACCCTGGCCCCTGGCCAGGCCCTACACTTAGATGTTaGTCATTCTCAGCCTTGGCAGAGCCCTTCTTCTTA +
Preference number: 6 (lower is better)
Translates to: DPGPWPGPTLRC*SFSALAEPFFL
Trigger: TAAGAAGAAGGGCTCTGCCAAGGCTGAGAATGACAAACATCTAAGTGTAGGGCCTGGCCAGGGGCCAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294521.7
ENST00000373480.1
CDS CAA 72 bp TGGATACTCTGGGTGTCTCCATGGTCCCAGCCACCCTaGTTCAGTTTCTGTTTCTCTTGGTGTTGTAGGGAG +
Preference number: 6 (lower is better)
Translates to: WILWVSPWSQPP*FSFCFSWCCRE
Trigger: CTCCCTACAACACCAAGAGAAACAGAAACTGAACAAGGGTGGCTGGGACCATGGAGACACCCAGAGTATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294521.7
ENST00000373480.1
ENST00000373481.7
ENST00000401073.7
ENST00000468130.1