RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIAA1328 (Homo sapiens)

Ensembl gene IDs: ENSG00000150477

Ensembl transcript IDs: ENST00000280020.10, ENST00000586135.1, ENST00000586501.1, ENST00000587139.5, ENST00000590456.5, ENST00000590617.5, ENST00000591619.5, ENST00000591911.1, ENST00000592521.5, ENST00000592611.5, ENST00000599493.1, ENST00000601437.2

Found 869 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTTATGGGATaGGCAGCTGCCAGGCTGATGGCTACTGAGACTGACTCACAATTG +
Preference number: 1 (lower is better)
Translates to: GWVSPSSPLSSLVMG*AAARLMATETDSQL
Trigger: CAATTGTGAGTCAGTCTCAGTAGCCATCAGCCTGGCAGCTGCCCATCCCATAACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR CCA 90 bp GCCCTCGGCATGTGTCCAGTCTTGCTTTGGGAAGTGTCTAGAGGCTaGACGAGCAAATCCCAACCAGTCAAGGGTGGGAGACTTGAGACG +
Preference number: 1 (lower is better)
Translates to: ALGMCPVLLWEVSRG*TSKSQPVKGGRLET
Trigger: CGTCTCAAGTCTCCCACCCTTGACTGGTTGGGATTTGCTCGTCCAGCCTCTAGACACTTCCCAAAGCAAGACTGGACACATGCCGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR TCA 90 bp ATTGGTTTTTCTCTCACAGGAGTTGGGCAGCAGGGTGGGCAATGGTaGGGCACTATCCGCAACGCCCTCGGCATGTGTCCAGTCTTGCTT +
Preference number: 1 (lower is better)
Translates to: IGFSLTGVGQQGGQW*GTIRNALGMCPVLL
Trigger: AAGCAAGACTGGACACATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACTCCTGTGAGAGAAAAACCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR GCA 90 bp AATGGTGAGGCACTATCCGCAACGCCCTCGGCATGTGTCCAGTCTTaGTTTGGGAAGTGTCTAGAGGCTGGACGAGCAAATCCCAACCAG +
Preference number: 1 (lower is better)
Translates to: NGEALSATPSACVQS*FGKCLEAGRANPNQ
Trigger: CTGGTTGGGATTTGCTCGTCCAGCCTCTAGACACTTCCCAAAGCAAGACTGGACACATGCCGAGGGCGTTGCGGATAGTGCCTCACCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CCA 90 bp CTGCTTGGGTGGTGGAACATACTCTGGCAAGTAGAGATGGTTCTTTaGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTTGTATC +
Preference number: 1 (lower is better)
Translates to: LLGWWNILWQVEMVL*GHEQSTCEAWSACI
Trigger: GATACAAGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTACTTGCCAGAGTATGTTCCACCACCCAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR CCA 90 bp GTAAACATTGATTGGTTTTTCTCTCACAGGAGTTGGGCAGCAGGGTaGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATGTGTCC +
Preference number: 1 (lower is better)
Translates to: VNIDWFFSHRSWAAG*AMVRHYPQRPRHVS
Trigger: GGACACATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACTCCTGTGAGAGAAAAACCAATCAATGTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CCA 90 bp CATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTaGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAG +
Preference number: 1 (lower is better)
Translates to: HDSRPQLLWRDSAEV*AQSLGSETEPNPTK
Trigger: CTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
3UTR TCA 90 bp CTGGCAAGTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTaGGGCCTGGTCAGCTTGTATCCTTTAATCCTCGTGGAGGAAAAG +
Preference number: 1 (lower is better)
Translates to: LASRDGSLGPRAEHL*GLVSLYPLILVEEK
Trigger: CTTTTCCTCCACGAGGATTAAAGGATACAAGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTACTTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR TCA 90 bp GGGAAGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATaGCTTTGTCTACCAACACTGACTAAGTCTTACTCCCAGTTTAGT +
Preference number: 1 (lower is better)
Translates to: GKPRRLAACRLPWVV*LCLPTLTKSYSQFS
Trigger: ACTAAACTGGGAGTAAGACTTAGTCAGTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CCA 90 bp GTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGAACATACTCTaGCAAGTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGT +
Preference number: 1 (lower is better)
Translates to: VRKSRETLLGWWNIL*QVEMVLWGHEQSTC
Trigger: ACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTACTTGCCAGAGTATGTTCCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR CCA 90 bp CCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTTTaGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCATACCG +
Preference number: 1 (lower is better)
Translates to: PSFSGGIALRFGRRV*AQRLNQIQQRCLIP
Trigger: CGGTATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR TCA 90 bp CTTGTGCCTCCACTGAATTTCCCCAGGACTAATCACTCCCTGATGTaGTTTAGTGCTGCTTGCTCCCAAGGATTGGCTGGGTCTCACCCT +
Preference number: 1 (lower is better)
Translates to: LVPPLNFPRTNHSLM*FSAACSQGLAGSHP
Trigger: AGGGTGAGACCCAGCCAATCCTTGGGAGCAAGCAGCACTAAATCACATCAGGGAGTGATTAGTCCTGGGGAAATTCAGTGGAGGCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR TCA 90 bp AGGCCTCTCCTCTCCCCTGATTCTCTGGCCAGAAGATCTCTATTATaGACTTGGTGCCGGAAGCAGGGACAAGTGAAGAGTAGCTCTGAG +
Preference number: 1 (lower is better)
Translates to: RPLLSPDSLARRSLL*TWCRKQGQVKSSSE
Trigger: CTCAGAGCTACTCTTCACTTGTCCCTGCTTCCGGCACCAAGTTCATAATAGAGATCTTCTGGCCAGAGAATCAGGGGAGAGGAGAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CCA 90 bp ACACTGGAGTCTGGAATGGGTGACTGTGGGCATGGGAGTAGTCTATaGGAGTCAAGTACACTTAAGCTAGTCATGACACAGGGGGCAAGG +
Preference number: 1 (lower is better)
Translates to: TLESGMGDCGHGSSL*ESSTLKLVMTQGAR
Trigger: CCTTGCCCCCTGTGTCATGACTAGCTTAAGTGTACTTGACTCCCATAGACTACTCCCATGCCCACAGTCACCCATTCCAGACTCCAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CCA 90 bp CCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTTTaGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCATACCT +
Preference number: 1 (lower is better)
Translates to: PSFSGGIALRFGRRV*AQRLNQIQQRCLIP
Trigger: AGGTATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586135.1
3UTR TCA 90 bp CCAGAAGATCTCTATTATGAACTTGGTGCCGGAAGCAGGGACAAGTaGAGAGTAGCTCTGAGGGAGCAGAAAGAGTCCCTCTCTCCCCAT +
Preference number: 1 (lower is better)
Translates to: PEDLYYELGAGSRDK*RVALREQKESLSPH
Trigger: ATGGGGAGAGAGGGACTCTTTCTGCTCCCTCAGAGCTACTCTTCACTTGTCCCTGCTTCCGGCACCAAGTTCATAATAGAGATCTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR GCA 90 bp AGGAAAAGGGAGGGCCAGAGGAAGCCCATCAGCTTTGCAGCAGCTTaGATCACTCTCTCTCTAGTGGCATTTTCCGTAGACATAACCATG +
Preference number: 1 (lower is better)
Translates to: RKREGQRKPISFAAA*ITLSLVAFSVDITM
Trigger: CATGGTTATGTCTACGGAAAATGCCACTAGAGAGAGAGTGATGCAAGCTGCTGCAAAGCTGATGGGCTTCCTCTGGCCCTCCCTTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR GCA 90 bp TTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTaGTTCAGGCTTGTGCCTCCACTGAATTTCCCCAGGACTAATCAC +
Preference number: 1 (lower is better)
Translates to: FWDIGGVVTQTLVEE*FRLVPPLNFPRTNH
Trigger: GTGATTAGTCCTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR TCA 90 bp CTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACTaGCTAAGTCTTACTCCCAGTTTAGTTGGGGTTGGTAAAAAGGAG +
Preference number: 1 (lower is better)
Translates to: LHAGCPGWYDFVYQH*LSLTPSLVGVGKKE
Trigger: CTCCTTTTTACCAACCCCAACTAAACTGGGAGTAAGACTTAGTCAGTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR TCA 90 bp ACCACCATGCACCAGAGATGCCCAAGAAAGCCGACAATAACTGCATaGTTCTGGATGTGTCTTAGGATGTTGAGGGGTCATGTTTGTAGG +
Preference number: 1 (lower is better)
Translates to: TTMHQRCPRKPTITA*FWMCLRMLRGHVCR
Trigger: CCTACAAACATGACCCCTCAACATCCTAAGACACATCCAGAATCATGCAGTTATTGTCGGCTTTCTTGGGCATCTCTGGTGCATGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR CCA 90 bp TATTCTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATaGAGAGGCAAAGAAGCAATAAAACTCCACTCTGTGGCTGTGACC +
Preference number: 1 (lower is better)
Translates to: YSAESPSLLFQIGHS*RGKEAIKLHSVAVT
Trigger: GGTCACAGCCACAGAGTGGAGTTTTATTGCTTCTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR TCA 90 bp CAAGTTTGCCTCCTGGAAAGCGGACTGTTAGCAAAAGCTTTTCTATaGTTCACTTTGGTTCTCTGCATCAAGAACTGTGGGCCTTACTTA +
Preference number: 1 (lower is better)
Translates to: QVCLLESGLLAKAFL*FTLVLCIKNCGPYL
Trigger: TAAGTAAGGCCCACAGTTCTTGATGCAGAGAACCAAAGTGAATCATAGAAAAGCTTTTGCTAACAGTCCGCTTTCCAGGAGGCAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR TCA 90 bp ATGTGTGTCTCTGCATGTGAGATGGGTTTCCTGAAAACAGCACACTaGTGGGTCTTGACTCTTTATCCAATTTGCCAGTCTGTGTCTTTT +
Preference number: 1 (lower is better)
Translates to: MCVSACEMGFLKTAH*WVLTLYPICQSVSF
Trigger: AAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTTTTCAGGAAACCCATCTCACATGCAGAGACACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR GCA 90 bp TTCCTTCATGTGCAATTCTTCTTGTGGCATTTTCTCTGTTGGGACTaGAGGTTTTCTCCCTGGAGATTCACAATTACATGTTGTGGTCTC +
Preference number: 1 (lower is better)
Translates to: FLHVQFFLWHFLCWD*RFSPWRFTITCCGL
Trigger: GAGACCACAACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGAAAATGCCACAAGAAGAATTGCACATGAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR TCA 90 bp ATGGCCTTATCAGGCACAAAGGAAGCTATAGCACATATTGTTAAGTaGCGTTCTGATTGCCTAGAAATGGCAGCACATGCAGATTTACTC +
Preference number: 1 (lower is better)
Translates to: MALSGTKEAIAHIVK*RSDCLEMAAHADLL
Trigger: GAGTAAATCTGCATGTGCTGCCATTTCTAGGCAATCAGAACGTCACTTAACAATATGTGCTATAGCTTCCTTTGTGCCTGATAAGGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592521.5
3UTR CCA 90 bp AAACTTGGTCCAGAGTCACTGCCATTCATATCCAGTTTGAGTTCTTaGGGTTTAGTAAGCTGTTTTTCAGCAACCAGTTCTCTCGACTTA +
Preference number: 1 (lower is better)
Translates to: KLGPESLPFISSLSS*GLVSCFSATSSLDL
Trigger: TAAGTCGAGAGAACTGGTTGCTGAAAAACAGCTTACTAAACCCCAAGAACTCAAACTGGATATGAATGGCAGTGACTCTGGACCAAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590617.5
3UTR TCA 90 bp AGTGAGTCAGCATTTTCTAGCAGAAGTTTGAGAAGGAAACACTCTTaGAATGAGGCTGAATATGCAATGGTTTCCACCACGCAGAAAGTA +
Preference number: 1 (lower is better)
Translates to: SESAFSSRSLRRKHS*NEAEYAMVSTTQKV
Trigger: TACTTTCTGCGTGGTGGAAACCATTGCATATTCAGCCTCATTTCAAGAGTGTTTCCTTCTCAAACTTCTGCTAGAAAATGCTGACTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR TCA 90 bp TTGATGCAGTTTCTTCCTAGCCTTGATGGTCTTTACATTTTGGCATaGTTTTGCAGCAGCTGGTACCAGTTGTTCCTTTCCATGTTTAGT +
Preference number: 1 (lower is better)
Translates to: LMQFLPSLDGLYILA*FCSSWYQLFLSMFS
Trigger: ACTAAACATGGAAAGGAACAACTGGTACCAGCTGCTGCAAAATCATGCCAAAATGTAAAGACCATCAAGGCTAGGAAGAAACTGCATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR CCA 90 bp TCTGCCATACCACAGAAAGCTCCACACTCCAAAGGCTTTTTGATATaGGATGAAACCGATTTGGTTACTCTCAGAGGTGAACTTTATAAA +
Preference number: 1 (lower is better)
Translates to: SAIPQKAPHSKGFLI*DETDLVTLRGELYK
Trigger: TTTATAAAGTTCACCTCTGAGAGTAACCAAATCGGTTTCATCCCATATCAAAAAGCCTTTGGAGTGTGGAGCTTTCTGTGGTATGGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CCA 90 bp TTGGGACTGCAGGTTTTCTCCCTGGAGATTCACAATTACATGTTGTaGTCTCTGATGGTATCTTATCTAGATCATCTTTGGGATGATGAA +
Preference number: 1 (lower is better)
Translates to: LGLQVFSLEIHNYML*SLMVSYLDHLWDDE
Trigger: TTCATCATCCCAAAGATGATCTAGATAAGATACCATCAGAGACCACAACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR CCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCCTCCCAAGGATTGGCTaGGTCTCACCCTCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: KESATASISLSRLRPALPLPRIG*VSPSSP
Trigger: TGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAG...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CAA 90 bp TGCTGCTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATaGAGCTCTTTGGTTATGGGATGGGCAGCTGCCAGGCTGATGGCT +
Preference number: 2 (lower is better)
Translates to: CCLLPRIGWVSPSSP*SSLVMGWAAARLMA
Trigger: AGCCATCAGCCTGGCAGCTGCCCATCCCATAACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATCTGCCCTGGGTGGTATaGCTTTGTCTACCAACACTG +
Preference number: 2 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHLPWVV*LCLPTL
Trigger: CAGTGTTGGTAGACAAAGTCATACCACCCAGGGCAG...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR TCA 90 bp CAAGGACCTCCCTCTTGGCACTCCCTCTGGCTCCACTGGACACCCTCCTCACCCTCCAGTCGAGACTGGTaGAGCTGCTGCTGTTTTAGA +
Preference number: 2 (lower is better)
Translates to: QGPPSWHSLWLHWTPSSPSSRDW*SCCCFR
Trigger: TCTAAAACAGCAGCAGCTTCACCAGTCTCGACTGGA...GGGTGAGGAGGGTGTCCAGTGGAGCCAGAGGGAGTGCCAAGAGGGAGGTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592611.5
3UTR-3UTR CCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCTTGCTCCCAAGGATTaGCTGGGTCTCACCCTCCAG +
Preference number: 2 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYLAPKD*LGLTLQ
Trigger: CTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR CAA 90 bp CTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTaGGTTATGGGATGGGCAGCTGCCAGGCTGATGGCTACTGAGACT +
Preference number: 2 (lower is better)
Translates to: LPRIGWVSPSSPLSS*VMGWAAARLMATET
Trigger: AGTCTCAGTAGCCATCAGCCTGGCAGCTGCCCATCCCATAACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTCTCTCGTGTTGTTTGTaGTGGCAGGGGCACCAACTC +
Preference number: 2 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSALSCCL*WQGHQL
Trigger: GAGTTGGTGCCCCTGCCATCACAAACAACACGAGAG...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACGGGACCACTGCAAGCTaGAGGACCCATCTCAAGAGC +
Preference number: 2 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHGTTAS*RTHLKS
Trigger: GCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCC...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp CATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGTGGGCCAGCAGATGCTaGAGGCGCTCCTTTTCAATT +
Preference number: 2 (lower is better)
Translates to: HDSRPQLLWRDSAEVWAQWASRC*RRSFSI
Trigger: AATTGAAAAGGAGCGCCTTCAGCATCTGCTGGCCCA...CTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR GCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCTCGCTGCATGCAGGCTaGCCTGGGTGGTATGACTTT +
Preference number: 2 (lower is better)
Translates to: KESATASISLSRLRPALPSLHAG*PGWYDF
Trigger: AAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGA...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CCA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGCTTGCTCCCAAGGATTaGCTGGGTCTCACCCTCCAG +
Preference number: 2 (lower is better)
Translates to: EATRDHCKLKDPSQELCGLAPKD*LGLTLQ
Trigger: CTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACGTAGAGATGGTTCTTTaGGGCCACGAGCAGAGCACC +
Preference number: 2 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYVEMVL*GHEQST
Trigger: GGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATACCCTGCTTGGGTGGTaGAACATACTCTGGCAAGTA +
Preference number: 2 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHTLLGW*NILWQV
Trigger: TACTTGCCAGAGTATGTTCCACCACCCAAGCAGGGT...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR TCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTCACCCTCCAGCCCATTaGGCTCTTTGGTTATGGGAT +
Preference number: 2 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSAHPPAH*ALWLWD
Trigger: ATCCCATAACCAAAGAGCTCAATGGGCTGGAGGGTG...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCACCCTCCAGCCCATTaGGCTCTTTGGTTATGGGAT +
Preference number: 2 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYHPPAH*ALWLWD
Trigger: ATCCCATAACCAAAGAGCTCAATGGGCTGGAGGGTG...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACGGCTTGTGCCTCCACTaGATTTCCCCAGGACTAATC +
Preference number: 2 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYGLCLH*ISPGLI
Trigger: GATTAGTCCTGGGGAAATTCAGTGGAGGCACAAGCC...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTGGCTTGTGCCTCCACTaGATTTCCCCAGGACTAATC +
Preference number: 2 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSAGLCLH*ISPGLI
Trigger: GATTAGTCCTGGGGAAATTCAGTGGAGGCACAAGCC...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGCGAGCAGAGCACCTGTaGGGCCTGGTCAGCTTGTAT +
Preference number: 2 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWRAEHL*GLVSLY
Trigger: ATACAAGCTGACCAGGCCTCACAGGTGCTCTGCTCG...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCCTGCCCTGGGTGGTATaGCTTTGTCTACCAACACTG +
Preference number: 2 (lower is better)
Translates to: KESATASISLSRLRPALPLPWVV*LCLPTL
Trigger: CAGTGTTGGTAGACAAAGTCATACCACCCAGGGCAG...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR GCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATGCCACGCAGACTCGCTaGATGCAGGCTGCCCTGGGT +
Preference number: 2 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHATQTR*MQAALG
Trigger: ACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGC...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCGAGACCCTGCTTGGGTaGTGGAACATACTCTGGCAA +
Preference number: 2 (lower is better)
Translates to: KESATASISLSRLRPALPETLLG*WNILWQ
Trigger: TTGCCAGAGTATGTTCCACCACCCAAGCAGGGTCTC...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CAA 90 bp GGATGGGCAGCTGCCAGGCTGATGGCTACTGAGACTGACTCACAATaGGCTCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACT +
Preference number: 2 (lower is better)
Translates to: GWAAARLMATETDSQ*ALVLFVMAGAPTPT
Trigger: AGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGAGCCAATTGTGAGTCAGTCTCAGTAGCCATCAGCCTGGCAGCTGCCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATAGTCTGCAACAGCTTTaGGGCTCTGTAACAACCTTT +
Preference number: 2 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHSLQQL*GSVTTF
Trigger: AAAGGTTGTTACAGAGCCTCAAAGCTGTTGCAGACT...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR TCA 90 bp CATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGGCGCCTGGATGGACTTaGTACTTCTTGAAGATTGAC +
Preference number: 2 (lower is better)
Translates to: HDSRPQLLWRDSAEVWAQAPGWT*YFLKID
Trigger: GTCAATCTTCAAGAAGTATCAAGTCCATCCAGGCGC...CTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592611.5
3UTR-3UTR GCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCGAAGCCCATCAGCTTTaGAGCAGCTTGCATCACTCT +
Preference number: 2 (lower is better)
Translates to: KESATASISLSRLRPALPEAHQL*SSLHHS
Trigger: AGAGTGATGCAAGCTGCTGCAAAGCTGATGGGCTTC...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CCA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGTCTTTGGTTATGGGATaGGCAGCTGCCAGGCTGATG +
Preference number: 2 (lower is better)
Translates to: EATRDHCKLKDPSQELCGSLVMG*AAARLM
Trigger: CATCAGCCTGGCAGCTGCCCATCCCATAACCAAAGA...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCTCCATAGGCTTTCTCTaGGTCAAAACGAGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: KESATASISLSRLRPALPSIGFL*VKTRPV
Trigger: CACTGGCCTCGTTTTGACCCAGAGAAAGCCTATGGA...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR GCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACACATTGGTAGAAGAGTaGTTCAGGCTTGTGCCTCCA +
Preference number: 2 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYTLVEE*FRLVPP
Trigger: TGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGT...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR GCA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGGAAGCCCATCAGCTTTaGAGCAGCTTGCATCACTCT +
Preference number: 2 (lower is better)
Translates to: EATRDHCKLKDPSQELCGEAHQL*SSLHHS
Trigger: AGAGTGATGCAAGCTGCTGCAAAGCTGATGGGCTTC...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR GCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCAGGCAGATTCCTTTGTaGCAGATCCTTTCTCTTGGG +
Preference number: 2 (lower is better)
Translates to: KESATASISLSRLRPALPRQIPL*QILSLG
Trigger: CCCAAGAGAAAGGATCTGGCACAAAGGAATCTGCCT...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CAA 90 bp CTAGAGGCTGGACGAGCAAATCCCAACCAGTCAAGGGTGGGAGACTaGAGACGGAGGAAAGGCAGATTCCTTTGTGCCAGATCCTTTCTC +
Preference number: 2 (lower is better)
Translates to: LEAGRANPNQSRVGD*RRRKGRFLCARSFL
Trigger: GAGAAAGGATCTGGCACAAAGGAATCTGCCTTTCCTCCGTCTCAAGTCTCCCACCCTTGACTGGTTGGGATTTGCTCGTCCAGCCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CAA 90 bp CCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTTaGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCATACC +
Preference number: 2 (lower is better)
Translates to: PQLLWRDSAEVWAQS*GSETEPNPTKMSHT
Trigger: GGTATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR GCA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGACATTGGTAGAAGAGTaGTTCAGGCTTGTGCCTCCA +
Preference number: 2 (lower is better)
Translates to: EATRDHCKLKDPSQELCGTLVEE*FRLVPP
Trigger: TGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGT...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR GCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACAGCTTTGCAGCAGCTTaGATCACTCTCTCTCTAGTG +
Preference number: 2 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHSFAAA*ITLSLV
Trigger: CACTAGAGAGAGAGTGATGCAAGCTGCTGCAAAGCT...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATAAGAGACATGAGCTTTaGATCTATCTGGATAAGGAG +
Preference number: 2 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHKRHEL*IYLDKE
Trigger: CTCCTTATCCAGATAGATCCAAAGCTCATGTCTCTT...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCGGGATGAAACCGATTTaGTTACTCTCAGAGGTGAAC +
Preference number: 2 (lower is better)
Translates to: KESATASISLSRLRPALPGMKPI*LLSEVN
Trigger: GTTCACCTCTGAGAGTAACCAAATCGGTTTCATCCC...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CCA 90 bp TCCTCCAACTCTTCAGGGGTTCTGTGCATCCCCATCTTCTTCCGGGTTGATTTTAGGCCCCAGCTTCTCTaGAGGGATAGCGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: SSNSSGVLCIPIFFRVDFRPQLL*RDSAEV
Trigger: AACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCT...AAAATCAACCCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGAGTTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
3UTR-3UTR TCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGCGAGCAGAGCACCTGTaGGGCCTGGTCAGCTTGTAT +
Preference number: 2 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKRAEHL*GLVSLY
Trigger: ATACAAGCTGACCAGGCCTCACAGGTGCTCTGCTCG...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR TCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATCTTTTTGATATGGGATaGAACCGATTTGGTTACTCT +
Preference number: 2 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHLFDMG*NRFGYS
Trigger: AGAGTAACCAAATCGGTTTCATCCCATATCAAAAAG...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR GCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATAAAGATGAGAGAGTCTaGCTTTCTGAAACTGCTTAT +
Preference number: 2 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHKDERV*LSETAY
Trigger: ATAAGCAGTTTCAGAAAGGCAGACTCTCTCATCTTT...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGTTCATTCTGGGATATTaGAGGGGTGGTCACCCAAAC +
Preference number: 2 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWFILGY*RGGHPN
Trigger: GTTTGGGTGACCACCCCTCCAATATCCCAGAATGAA...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACTGTTCTTATTCATTCTaGGATATTGGAGGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYCSYSF*DIGGVV
Trigger: GACCACCCCTCCAATATCCCAGAATGAATAAGAACA...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR CAA 90 bp AATCCAGTCGAGACTGGTGAAGCTGCTGCTGTTTTAGAAGAAGCTTaGTCTCCTGCTGGGCCAGCAGATGCTGAAGGCGCTCCTTTTCAA +
Preference number: 2 (lower is better)
Translates to: NPVETGEAAAVLEEA*SPAGPADAEGAPFQ
Trigger: TTGAAAAGGAGCGCCTTCAGCATCTGCTGGCCCAGCAGGAGACAAAGCTTCTTCTAAAACAGCAGCAGCTTCACCAGTCTCGACTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR TCA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGCTCTCGTGTTGTTTGTaGTGGCAGGGGCACCAACTC +
Preference number: 2 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKLSCCL*WQGHQL
Trigger: GAGTTGGTGCCCCTGCCATCACAAACAACACGAGAG...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR TCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGGGGCAGCTGCCAGGCTaGTGGCTACTGAGACTGACT +
Preference number: 2 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVGQLPG*WLLRLT
Trigger: AGTCAGTCTCAGTAGCCATCAGCCTGGCAGCTGCCC...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCGGGCAGCTGCCAGGCTaGTGGCTACTGAGACTGACT +
Preference number: 2 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPGQLPG*WLLRLT
Trigger: AGTCAGTCTCAGTAGCCATCAGCCTGGCAGCTGCCC...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR GCA 90 bp GGTGAAGCTGCTGCTGTTTTAGAAGAAGCTTTGTCTCCTGCTGGGCCAGCAGATAAAGTTTCAATGGGTTaGAGTGCCCCACCACCATGC +
Preference number: 2 (lower is better)
Translates to: GEAAAVLEEALSPAGPADKVSMG*SAPPPC
Trigger: GCATGGTGGTGGGGCACTGCAACCCATTGAAACTTT...ATCTGCTGGCCCAGCAGGAGACAAAGCTTCTTCTAAAACAGCAGCAGCTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR CCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGAGGCTGAATATGCAATaGTTTCCACCACGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWRLNMQ*FPPRRK
Trigger: CTTTCTGCGTGGTGGAAACCATTGCATATTCAGCCT...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CCA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGTGTTCTTATTCATTCTaGGATATTGGAGGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: EATRDHCKLKDPSQELCGCSYSF*DIGGVV
Trigger: GACCACCCCTCCAATATCCCAGAATGAATAAGAACA...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR CAA 90 bp GCCAGGCTGATGGCTACTGAGACTGACTCACAATTGGCTCTCGTGTaGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAG +
Preference number: 2 (lower is better)
Translates to: ARLMATETDSQLALV*FVMAGAPTPTSELK
Trigger: CTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGAGCCAATTGTGAGTCAGTCTCAGTAGCCATCAGCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp TCCTTTTTAGTTGACAAGTATGTGCTTAGCAGCCTAACAGCAGCAGCAGAACAGGGTAGGAGAATCGCTTaGACCGGGAGGTGGAGGTTG +
Preference number: 2 (lower is better)
Translates to: SFLVDKYVLSSLTAAAEQGRRIA*TGRWRL
Trigger: CAACCTCCACCTCCCGGTTCAAGCGATTCTCCTACC...CTGTTCTGCTGCTGCTGTTAGGCTGCTAAGCACATACTTGTCAACTAAAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592521.5
3UTR-3UTR GCA 90 bp AGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTTACCGGGAGGTGGTGTaGTGTAATGATGGTGAGGCT +
Preference number: 2 (lower is better)
Translates to: RFGRRVWAQRLNQIQQRCYREVV*CNDGEA
Trigger: AGCCTCACCATCATTACAGCACACCACCTCCCGGTA...ACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR GCA 90 bp TTTTTAGTTGACAAGTATGTGCTTAGCAGCCTAACAGCAGCAGCAGAACAGCTGCCGGGAGGTGGAGGTTaGGGTGAACTGAAATCGCAC +
Preference number: 2 (lower is better)
Translates to: FLVDKYVLSSLTAAAEQLPGGGG*GELKSH
Trigger: GTGCGATTTCAGTTCACCGCAACCTCCACCTCCCGG...CAGCTGTTCTGCTGCTGCTGTTAGGCTGCTAAGCACATACTTGTCAACTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592521.5
3UTR-3UTR CCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGCTTGCTCCCAAGGATTaGCTGGGTCTCACCCTCCAG +
Preference number: 2 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVLAPKD*LGLTLQ
Trigger: CTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CCA 90 bp CATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGCACAATTACATGTTGTaGTCTCTGATGGTATCTTAT +
Preference number: 2 (lower is better)
Translates to: HDSRPQLLWRDSAEVWAQHNYML*SLMVSY
Trigger: ATAAGATACCATCAGAGACCACAACATGTAATTGTG...CTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR CCA 90 bp GGTGAAGCTGCTGCTGTTTTAGAAGAAGCTTTGTCTCCTGCTGGGCCAGCAGATTGGCATTTTCTCTGTTaGGACTGCAGGTTTTCTCCC +
Preference number: 2 (lower is better)
Translates to: GEAAAVLEEALSPAGPADWHFLC*DCRFSP
Trigger: GGGAGAAAACCTGCAGTCCCAACAGAGAAAATGCCA...ATCTGCTGGCCCAGCAGGAGACAAAGCTTCTTCTAAAACAGCAGCAGCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR TCA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGTTTCTAGCAGAAGTTTaGGAAGGAAACACTCTTGAA +
Preference number: 2 (lower is better)
Translates to: EATRDHCKLKDPSQELCGFLAEV*EGNTLE
Trigger: TTCAAGAGTGTTTCCTTCTCAAACTTCTGCTAGAAA...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGCACCCTCCAGCCCATTaGGCTCTTTGGTTATGGGAT +
Preference number: 2 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWHPPAH*ALWLWD
Trigger: ATCCCATAACCAAAGAGCTCAATGGGCTGGAGGGTG...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR GCA 90 bp CCTCACCCTACTTTCATGGACACTGTGGCCTCATCATTCTTGCTTTCATCTGGGACCATGCACCAGAGATaGCCAAGAAAGCCGACAATA +
Preference number: 2 (lower is better)
Translates to: PHPTFMDTVASSFLLSSGTMHQR*PRKPTI
Trigger: TATTGTCGGCTTTCTTGGGCATCTCTGGTGCATGGT...CCCAGATGAAAGCAAGAATGATGAGGCCACAGTGTCCATGAAAGTAGGGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592611.5
3UTR-3UTR GCA 90 bp TGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCATAAAGTTTCAATGGGTTaGAGTGCCCCACCACCATGC +
Preference number: 2 (lower is better)
Translates to: WAQSLGSETEPNPTKMSHKVSMG*SAPPPC
Trigger: GCATGGTGGTGGGGCACTGCAACCCATTGAAACTTT...ATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR CCA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGACCCTGCTTGGGTGGTaGAACATACTCTGGCAAGTA +
Preference number: 2 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKTLLGW*NILWQV
Trigger: TACTTGCCAGAGTATGTTCCACCACCCAAGCAGGGT...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGTCCATAGGCTTTCTCTaGGTCAAAACGAGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKSIGFL*VKTRPV
Trigger: CACTGGCCTCGTTTTGACCCAGAGAAAGCCTATGGA...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGGAAGTGTCTAGAGGCTaGACGAGCAAATCCCAACCA +
Preference number: 2 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKEVSRG*TSKSQP
Trigger: TGGTTGGGATTTGCTCGTCCAGCCTCTAGACACTTC...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CAA 90 bp TGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATaGGTAGAAGAGTGCTTCAGGCTTGTGCCTCCACTGAATTTCCCC +
Preference number: 2 (lower is better)
Translates to: CSYSFWDIGGVVTQT*VEECFRLVPPLNFP
Trigger: GGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGGGCTTGTGCCTCCACTaGATTTCCCCAGGACTAATC +
Preference number: 2 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVGLCLH*ISPGLI
Trigger: GATTAGTCCTGGGGAAATTCAGTGGAGGCACAAGCC...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp GCTTTTTCAAAGTTTCAATGGGTTGCAGTGCCCCACCACCATGCACCAGAGATGCCGACAATAACTGCATaGTTCTGGATGTGTCTTAGG +
Preference number: 2 (lower is better)
Translates to: AFSKFQWVAVPHHHAPEMPTITA*FWMCLR
Trigger: CCTAAGACACATCCAGAATCATGCAGTTATTGTCGG...CATCTCTGGTGCATGGTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR GCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGAGCTTTGCAGCAGCTTaGATCACTCTCTCTCTAGTG +
Preference number: 2 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKSFAAA*ITLSLV
Trigger: CACTAGAGAGAGAGTGATGCAAGCTGCTGCAAAGCT...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR GCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGTCTCTTGGGATAGTCTaGAACAGCTTTGAGGCTCTG +
Preference number: 2 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKSLGIV*NSFEAL
Trigger: CAGAGCCTCAAAGCTGTTGCAGACTATCCCAAGAGA...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGTCTTTGGTTATGGGATaGGCAGCTGCCAGGCTGATG +
Preference number: 2 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVSLVMG*AAARLM
Trigger: CATCAGCCTGGCAGCTGCCCATCCCATAACCAAAGA...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CCA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGTTCATTCTGGGATATTaGAGGGGTGGTCACCCAAAC +
Preference number: 2 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKFILGY*RGGHPN
Trigger: GTTTGGGTGACCACCCCTCCAATATCCCAGAATGAA...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGTTCATTCTGGGATATTaGAGGGGTGGTCACCCAAAC +
Preference number: 2 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKFILGY*RGGHPN
Trigger: GTTTGGGTGACCACCCCTCCAATATCCCAGAATGAA...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CCA 90 bp CCTCACCCTACTTTCATGGACACTGTGGCCTCATCATTCTTGCTTTCATCTGGGGAGTGCTTTTTCTACTaGATACCTGCTGTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: PHPTFMDTVASSFLLSSGECFFY*IPAVPA
Trigger: TGCAGGAACAGCAGGTATCCAGTAGAAAAAGCACTC...CCCAGATGAAAGCAAGAATGATGAGGCCACAGTGTCCATGAAAGTAGGGTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592611.5
3UTR-3UTR CCA 90 bp GGTGAAGCTGCTGCTGTTTTAGAAGAAGCTTTGTCTCCTGCTGGGCCAGCAGATTCCACAGATGAACACTaGAGAGTGCTTTTTCTACTG +
Preference number: 2 (lower is better)
Translates to: GEAAAVLEEALSPAGPADSTDEH*RVLFLL
Trigger: CAGTAGAAAAAGCACTCTCCAGTGTTCATCTGTGGA...ATCTGCTGGCCCAGCAGGAGACAAAGCTTCTTCTAAAACAGCAGCAGCTTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR CCA 90 bp ATGGCTGTCATGAACACGATCTGCAGCAAGTCTATGACCACAGCATTGACTAGGAGTAGGTCTGTGGTCTaGCTATGCTCAAGTAGGAAC +
Preference number: 2 (lower is better)
Translates to: MAVMNTICSKSMTTALTRSRSVV*LCSSRN
Trigger: GTTCCTACTTGAGCATAGCCAGACCACAGACCTACT...CCTAGTCAATGCTGTGGTCATAGACTTGCTGCAGATCGTGTTCATGACAGCCAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR CCA 90 bp AGGATGGCTGTCATGAACACGATCTGCAGCAAGTCTATGACCACAGCATTGACTTGGCATTTTCTCTGTTaGGACTGCAGGTTTTCTCCC +
Preference number: 2 (lower is better)
Translates to: RMAVMNTICSKSMTTALTWHFLC*DCRFSP
Trigger: GGGAGAAAACCTGCAGTCCCAACAGAGAAAATGCCA...AGTCAATGCTGTGGTCATAGACTTGCTGCAGATCGTGTTCATGACAGCCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR TCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCTCAAAACGAGGCCAGTaGGAAAAAGTAGGGAGACCC +
Preference number: 2 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPSKRGQ*EKVGRP
Trigger: GGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGA...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp TTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCCCGACAATAACTGCATaGTTCTGGATGTGTCTTAGG +
Preference number: 2 (lower is better)
Translates to: FGRRVWAQRLNQIQQRCLPTITA*FWMCLR
Trigger: CCTAAGACACATCCAGAATCATGCAGTTATTGTCGG...GAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR GCA 90 bp TGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCATGTCATGAACACGATCTaGAGCAAGTCTATGACCACA +
Preference number: 2 (lower is better)
Translates to: WAQSLGSETEPNPTKMSHVMNTI*SKSMTT
Trigger: TGTGGTCATAGACTTGCTGCAGATCGTGTTCATGAC...ATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR CCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATTGGTGGAACATACTCTaGCAAGTAGAGATGGTTCTT +
Preference number: 2 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHWWNIL*QVEMVL
Trigger: AAGAACCATCTCTACTTGCCAGAGTATGTTCCACCA...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CCA 90 bp AGGATGGCTGTCATGAACACGATCTGCAGCAAGTCTATGACCACAGCATTGACTTCTGAAGCTGAATCCTaGACTGCAGACTTAGGTCTT +
Preference number: 2 (lower is better)
Translates to: RMAVMNTICSKSMTTALTSEAES*TADLGL
Trigger: AAGACCTAAGTCTGCAGTCCAGGATTCAGCTTCAGA...AGTCAATGCTGTGGTCATAGACTTGCTGCAGATCGTGTTCATGACAGCCATCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR CCA 90 bp TCCTTTTTAGTTGACAAGTATGTGCTTAGCAGCCTAACAGCAGCAGCAGAACAGAATACGAAAATTAGCTaGGCCTGGTGGTGGGTGCCT +
Preference number: 2 (lower is better)
Translates to: SFLVDKYVLSSLTAAAEQNTKIS*AWWWVP
Trigger: AGGCACCCACCACCAGGCCCAGCTAATTTTCGTATT...CTGTTCTGCTGCTGCTGTTAGGCTGCTAAGCACATACTTGTCAACTAAAAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592521.5
3UTR CAA 90 bp ATGGCTGTCATGAACACGATCTGCAGCAAGTCTATGACCACAGCATaGACTAGGAGTAGGCTTAAGATGTGGACATTCCTTCATGTGCAA +
Preference number: 2 (lower is better)
Translates to: MAVMNTICSKSMTTA*TRSRLKMWTFLHVQ
Trigger: TTGCACATGAAGGAATGTCCACATCTTAAGCCTACTCCTAGTCAATGCTGTGGTCATAGACTTGCTGCAGATCGTGTTCATGACAGCCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR TCA 90 bp TCTCTGTTGGGACTGCAGGTTTTCTCCCTGGAGATTCACAATTACATGTTGTGGATCCAGTTCCACAGATaGACACTGGAGAGTGCTTTT +
Preference number: 2 (lower is better)
Translates to: SLLGLQVFSLEIHNYMLWIQFHR*TLESAF
Trigger: AAAAGCACTCTCCAGTGTTCATCTGTGGAACTGGAT...CCACAACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR TCA 90 bp TTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCTCTTTCATATGCGAATaGAACCCAACTGTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: FGRRVWAQRLNQIQQRCLSFICE*NPTVFL
Trigger: GAGGAAGACAGTTGGGTTTCATTCGCATATGAAAGA...GAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR GCA 90 bp TTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCTTTCTACTGGATACCTaGTGTTCCTGCATTCTAGCA +
Preference number: 2 (lower is better)
Translates to: FGRRVWAQRLNQIQQRCLFLLDT*CSCILA
Trigger: TGCTAGAATGCAGGAACAGCAGGTATCCAGTAGAAA...GAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR CCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGAGGCTGAATATGCAATaGTTTCCACCACGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWRLNMQ*FPPRRK
Trigger: CTTTCTGCGTGGTGGAAACCATTGCATATTCAGCCT...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGTGTTCTTATTCATTCTaGGATATTGGAGGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKCSYSF*DIGGVV
Trigger: GACCACCCCTCCAATATCCCAGAATGAATAAGAACA...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CCA 90 bp TCACCCTACTTTCATGGACACTGTGGCCTCATCATTCTTGCTTTCATCTGGGCTTTGATAGTAGGTCTGTaGTCTGGCTATGCTCAAGTA +
Preference number: 2 (lower is better)
Translates to: SPYFHGHCGLIILAFIWALIVGL*SGYAQV
Trigger: TACTTGAGCATAGCCAGACCACAGACCTACTATCAA...AGCCCAGATGAAAGCAAGAATGATGAGGCCACAGTGTCCATGAAAGTAGGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592611.5
3UTR CAA 90 bp CCCATTTCTGCCATACCACAGAAAGCTCCACACTCCAAAGGCTTTTaGATATGGGATGAAACCGATTTGGTTACTCTCAGAGGTGAACTT +
Preference number: 2 (lower is better)
Translates to: PISAIPQKAPHSKGF*IWDETDLVTLRGEL
Trigger: AAGTTCACCTCTGAGAGTAACCAAATCGGTTTCATCCCATATCAAAAAGCCTTTGGAGTGTGGAGCTTTCTGTGGTATGGCAGAAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CAA 90 bp TCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTaGTGGCGTTCTCTGTATTTCCTGAATCTGAATGTTGGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: SDNYVSWSCSSRGVS*WRSLYFLNLNVGLP
Trigger: AGGCAGGCCAACATTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR-3UTR TCA 90 bp TCTTCTGAGATCTGCTTTTTCAAAGTTTCAATGGGTTGCAGTGCCCCACCACCATCTCTATACTGTAGCTaGAGAGCTTCCCTTTCTTTG +
Preference number: 2 (lower is better)
Translates to: SSEICFFKVSMGCSAPPPSLYCS*RASLSL
Trigger: CAAAGAAAGGGAAGCTCTTCAGCTACAGTATAGAGA...TGGTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAAAGCAGATCTCAGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR TCA 90 bp TGCTTTTTAATAGATGATGATGTTCCAAGCAGCCAGCCATCACAGTTTGACTTCGTAGGATGGCTGTCATaGACACGATCTGCAGCAAGT +
Preference number: 2 (lower is better)
Translates to: CFLIDDDVPSSQPSQFDFVGWLS*TRSAAS
Trigger: ACTTGCTGCAGATCGTGTTCATGACAGCCATCCTAC...GAAGTCAAACTGTGATGGCTGGCTGCTTGGAACATCATCATCTATTAAAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR GCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATAAAGATGAGAGAGTCTaGCTTTCTGAAACTGCTTAT +
Preference number: 2 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHKDERV*LSETAY
Trigger: ATAAGCAGTTTCAGAAAGGCAGACTCTCTCATCTTT...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR GCA 90 bp AGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTATGAACACTGGAGAGTaGTTTTTCTACTGGATACCT +
Preference number: 2 (lower is better)
Translates to: RFGRRVWAQRLNQIQQRCMNTGE*FFYWIP
Trigger: AGGTATCCAGTAGAAAAAGCACTCTCCAGTGTTCAT...ACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR GCA 90 bp CTATCTTCTGAGATCTGCTTTTTCAAAGTTTCAATGGGTTGCAGTGCCCCACCAGTCATGAACACGATCTaGAGCAAGTCTATGACCACA +
Preference number: 2 (lower is better)
Translates to: LSSEICFFKVSMGCSAPPVMNTI*SKSMTT
Trigger: TGTGGTCATAGACTTGCTGCAGATCGTGTTCATGAC...TGGTGGGGCACTGCAACCCATTGAAACTTTGAAAAAGCAGATCTCAGAAGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR CCA 90 bp CTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCATGTGAGATGGGTTTCCGCAACGGAACAAAGCTaGACAGAGAATGACTTTGAC +
Preference number: 2 (lower is better)
Translates to: LHPFILSLCVSLHVRWVSATEQS*TENDFD
Trigger: GTCAAAGTCATTCTCTGTCCAGCTTTGTTCCGTTGC...GGAAACCCATCTCACATGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR-3UTR TCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGCTTTTTGATATGGGATaGAACCGATTTGGTTACTCT +
Preference number: 2 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKLFDMG*NRFGYS
Trigger: AGAGTAACCAAATCGGTTTCATCCCATATCAAAAAG...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR TCA 90 bp AATGCTATAAGGGATTCTGAAGCTGAATCCTGGACTGCAGACTTAGGTCTTTGCTCTCTATACTGTAGCTaGAGAGCTTCCCTTTCTTTG +
Preference number: 2 (lower is better)
Translates to: NAIRDSEAESWTADLGLCSLYCS*RASLSL
Trigger: CAAAGAAAGGGAAGCTCTTCAGCTACAGTATAGAGA...GCAAAGACCTAAGTCTGCAGTCCAGGATTCAGCTTCAGAATCCCTTATAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR TCA 90 bp TTAGTTGACAAGTATGTGCTTAGCAGCCTAACAGCAGCAGCAGAACAGCTGGATGCACATATTGTTAAGTaGCGTTCTGATTGCCTAGAA +
Preference number: 2 (lower is better)
Translates to: LVDKYVLSSLTAAAEQLDAHIVK*RSDCLE
Trigger: TTCTAGGCAATCAGAACGTCACTTAACAATATGTGC...ATCCAGCTGTTCTGCTGCTGCTGTTAGGCTGCTAAGCACATACTTGTCAACTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592521.5
3UTR-3UTR GCA 90 bp ATTTTCTCTGTTGGGACTGCAGGTTTTCTCCCTGGAGATTCACAATTACATGTTTCTGTGGTCTGGCTATaGTCAAGTAGGAACCATCCA +
Preference number: 2 (lower is better)
Translates to: IFSVGTAGFLPGDSQLHVSVVWL*SSRNHP
Trigger: TGGATGGTTCCTACTTGAGCATAGCCAGACCACAGA...AACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR GCA 90 bp TTTTTAGTTGACAAGTATGTGCTTAGCAGCCTAACAGCAGCAGCAGAACAGCTGAGAAATGGCAGCACATaGAGATTTACTCCCTGTTAC +
Preference number: 2 (lower is better)
Translates to: FLVDKYVLSSLTAAAEQLRNGST*RFTPCY
Trigger: GTAACAGGGAGTAAATCTGCATGTGCTGCCATTTCT...CAGCTGTTCTGCTGCTGCTGTTAGGCTGCTAAGCACATACTTGTCAACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592521.5
3UTR-3UTR CCA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTGTAGAGATGGTTCTTTaGGGCCACGAGCAGAGCACC +
Preference number: 2 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSIVEMVL*GHEQST
Trigger: GGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCCTTGCTTTCAATGACTaGAGAGTTTTGAACTCTGGC +
Preference number: 2 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPLAFND*RVLNSG
Trigger: GCCAGAGTTCAAAACTCTCCAGTCATTGAAAGCAAG...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CCA 90 bp AGGATGGCTGTCATGAACACGATCTGCAGCAAGTCTATGACCACAGCATTGACTTATCTAGATCATCTTTaGGATGATGAAGGGTTACTG +
Preference number: 2 (lower is better)
Translates to: RMAVMNTICSKSMTTALTYLDHL*DDEGLL
Trigger: CAGTAACCCTTCATCATCCCAAAGATGATCTAGATA...AGTCAATGCTGTGGTCATAGACTTGCTGCAGATCGTGTTCATGACAGCCATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR CCA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTGCAGGCTGCCCTGGGTaGTATGACTTTGTCTACCAA +
Preference number: 2 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSIAGCPG*YDFVYQ
Trigger: TTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGC...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CCA 90 bp TGCTTTTTAATAGATGATGATGTTCCAAGCAGCCAGCCATCACAGTTTGACTTCGAGTGCTTTTTCTACTaGATACCTGCTGTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: CFLIDDDVPSSQPSQFDFECFFY*IPAVPA
Trigger: TGCAGGAACAGCAGGTATCCAGTAGAAAAAGCACTC...GAAGTCAAACTGTGATGGCTGGCTGCTTGGAACATCATCATCTATTAAAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR CAA 90 bp GACTTCAATAAACTTGGTCCAGAGTCACTGCCATTCATATCCAGTTaGAGTTCTTGGGGTTTAGTAAGCTGTTTTTCAGCAACCAGTTCT +
Preference number: 2 (lower is better)
Translates to: DFNKLGPESLPFISS*SSWGLVSCFSATSS
Trigger: AGAACTGGTTGCTGAAAAACAGCTTACTAAACCCCAAGAACTCAAACTGGATATGAATGGCAGTGACTCTGGACCAAGTTTATTGAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590617.5
3UTR-3UTR TCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGTTTCTAGCAGAAGTTTaGGAAGGAAACACTCTTGAA +
Preference number: 2 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVFLAEV*EGNTLE
Trigger: TTCAAGAGTGTTTCCTTCTCAAACTTCTGCTAGAAA...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR TCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCTTTCTAGCAGAAGTTTaGGAAGGAAACACTCTTGAA +
Preference number: 2 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPFLAEV*EGNTLE
Trigger: TTCAAGAGTGTTTCCTTCTCAAACTTCTGCTAGAAA...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR GCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCAAAGATGAGAGAGTCTaGCTTTCTGAAACTGCTTAT +
Preference number: 2 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPKDERV*LSETAY
Trigger: ATAAGCAGTTTCAGAAAGGCAGACTCTCTCATCTTT...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR GCA 90 bp TGCTTTTTAATAGATGATGATGTTCCAAGCAGCCAGCCATCACAGTTTGACTTCATGAACACTGGAGAGTaGTTTTTCTACTGGATACCT +
Preference number: 2 (lower is better)
Translates to: CFLIDDDVPSSQPSQFDFMNTGE*FFYWIP
Trigger: AGGTATCCAGTAGAAAAAGCACTCTCCAGTGTTCAT...GAAGTCAAACTGTGATGGCTGGCTGCTTGGAACATCATCATCTATTAAAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR CCA 90 bp ATGTTCCAAGCAGCCAGCCATCACAGTTTGACTTCAATAAACAATTGTAATCCATCCACAGATGAACACTaGAGAGTGCTTTTTCTACTG +
Preference number: 2 (lower is better)
Translates to: MFQAASHHSLTSINNCNPSTDEH*RVLFLL
Trigger: CAGTAGAAAAAGCACTCTCCAGTGTTCATCTGTGGA...TGGATTACAATTGTTTATTGAAGTCAAACTGTGATGGCTGGCTGCTTGGAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592611.5
3UTR-3UTR CCA 90 bp CATGATTTTGCAGCAGCTGGTACCAGTTGTTCCTTTCCATGTTTAGTGCTTCCTGAGTGTTTTCCAACTTaGTTCTTGGAAACTCTAAAA +
Preference number: 2 (lower is better)
Translates to: HDFAAAGTSCSFPCLVLPECFPT*FLETLK
Trigger: TTTTAGAGTTTCCAAGAACCAAGTTGGAAAACACTC...AGGAAGCACTAAACATGGAAAGGAACAACTGGTACCAGCTGCTGCAAAATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR-3UTR CCA 90 bp TGGGTCTTGACTCTTTATCCAATTTGCCAGTCTGTGTCTTTTAATTGGAGCATTGACAATTATGTGTCTTaGAGTTGCTCTTCTCGAGGA +
Preference number: 2 (lower is better)
Translates to: WVLTLYPICQSVSFNWSIDNYVS*SCSSRG
Trigger: TCCTCGAGAAGAGCAACTCCAAGACACATAATTGTC...AATGCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR-3UTR TCA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTTTTGTCTACCAACACTaGCTAAGTCTTACTCCCAGT +
Preference number: 2 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSIFVYQH*LSLTPS
Trigger: ACTGGGAGTAAGACTTAGTCAGTGTTGGTAGACAAA...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR GCA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTCTGAAAGCCCATCTCTaGTTTTCCAAATTGGCCATT +
Preference number: 2 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSILKAHL*FSKLAI
Trigger: AATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAG...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CCA 90 bp TGGGTCTTGACTCTTTATCCAATTTGCCAGTCTGTGTCTTTTAATTGGAGCATTATGGTCTTTACATTTTaGCATGATTTTGCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: WVLTLYPICQSVSFNWSIMVFTF*HDFAAA
Trigger: AGCTGCTGCAAAATCATGCCAAAATGTAAAGACCAT...AATGCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR CAA 90 bp AAAGCTCCACACTCCAAAGGCTTTTTGATATGGGATGAAACCGATTaGGTTACTCTCAGAGGTGAACTTTATAAAGAAATTTTAATCTGT +
Preference number: 2 (lower is better)
Translates to: KAPHSKGFLIWDETD*VTLRGELYKEILIC
Trigger: ACAGATTAAAATTTCTTTATAAAGTTCACCTCTGAGAGTAACCAAATCGGTTTCATCCCATATCAAAAAGCCTTTGGAGTGTGGAGCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR TCA 72 bp TCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTaGGCTCTTTGGTTATGGGATGGGCAGCTGCCAGGC +
Preference number: 3 (lower is better)
Translates to: SQGLAGSHPPAH*ALWLWDGQLPG
Trigger: GCCTGGCAGCTGCCCATCCCATAACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CAA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATGTGGTCACCCAAACATaGGTAGAAGAGTGCTTCAGG +
Preference number: 3 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHVVTQT*VEECFR
Trigger: CCTGAAGCACTCTTCTACCAATGTTTGGGTGACCAC...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CAA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACAGCCCATTGAGCTCTTaGGTTATGGGATGGGCAGCT +
Preference number: 3 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYSPLSS*VMGWAA
Trigger: AGCTGCCCATCCCATAACCAAAGAGCTCAATGGGCT...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR CCA 72 bp TCACCCTCCAGCCCATTGAGCTCTTTGGTTATGGGATaGGCAGCTGCCAGGCTGATGGCTACTGAGACTGAC +
Preference number: 3 (lower is better)
Translates to: SPSSPLSSLVMG*AAARLMATETD
Trigger: GTCAGTCTCAGTAGCCATCAGCCTGGCAGCTGCCCATCCCATAACCAAAGAGCTCAATGGGCTGGAGGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR CCA 72 bp AGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTaGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAAT +
Preference number: 3 (lower is better)
Translates to: RPQLLWRDSAEV*AQSLGSETEPN
Trigger: ATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
3UTR CCA 72 bp GTCGGAAAGTACCATGATTCCAGGCCCCAGCTTCTCTaGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTTTG +
Preference number: 3 (lower is better)
Translates to: VGKYHDSRPQLL*RDSAEVWAQSL
Trigger: CAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATGGTACTTTCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
3UTR-3UTR CAA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGAGTAGAGATGGTTCTTaGGGGCCACGAGCAGAGCAC +
Preference number: 3 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWSRDGS*GPRAEH
Trigger: GTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTACT...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CAA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACGAACACACCCTCCCCTaGCTTTCAATGACTGGAGAG +
Preference number: 3 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHEHTLP*LSMTGE
Trigger: CTCTCCAGTCATTGAAAGCAAGGGGAGGGTGTGTTC...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR GCA 72 bp GCACTATCCGCAACGCCCTCGGCATGTGTCCAGTCTTaGTTTGGGAAGTGTCTAGAGGCTGGACGAGCAAAT +
Preference number: 3 (lower is better)
Translates to: ALSATPSACVQS*FGKCLEAGRAN
Trigger: ATTTGCTCGTCCAGCCTCTAGACACTTCCCAAAGCAAGACTGGACACATGCCGAGGGCGTTGCGGATAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CCA 72 bp AGTAGGGAGACCCTGCTTGGGTGGTGGAACATACTCTaGCAAGTAGAGATGGTTCTTTGGGGCCACGAGCAG +
Preference number: 3 (lower is better)
Translates to: SRETLLGWWNIL*QVEMVLWGHEQ
Trigger: CTGCTCGTGGCCCCAAAGAACCATCTCTACTTGCCAGAGTATGTTCCACCACCCAAGCAGGGTCTCCCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR CCA 72 bp ATCCGCAACGCCCTCGGCATGTGTCCAGTCTTGCTTTaGGAAGTGTCTAGAGGCTGGACGAGCAAATCCCAA +
Preference number: 3 (lower is better)
Translates to: IRNALGMCPVLL*EVSRGWTSKSQ
Trigger: TTGGGATTTGCTCGTCCAGCCTCTAGACACTTCCCAAAGCAAGACTGGACACATGCCGAGGGCGTTGCGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CAA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGGAGACTGACTCACAATaGGCTCTCGTGTTGTTTGTG +
Preference number: 3 (lower is better)
Translates to: EATRDHCKLKDPSQELCGETDSQ*ALVLFV
Trigger: CACAAACAACACGAGAGCCAATTGTGAGTCAGTCTC...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR TCA 72 bp GACGAGCAAATCCCAACCAGTCAAGGGTGGGAGACTTaGGACGGAGGAAAGGCAGATTCCTTTGTGCCAGAT +
Preference number: 3 (lower is better)
Translates to: DEQIPTSQGWET*DGGKADSFVPD
Trigger: ATCTGGCACAAAGGAATCTGCCTTTCCTCCGTCTCAAGTCTCCCACCCTTGACTGGTTGGGATTTGCTCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR GCA 72 bp ATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTaGTTCAGGCTTGTGCCTCCACTGAATTTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: IGGVVTQTLVEE*FRLVPPLNFPR
Trigger: CCTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR CCA 72 bp ATGTGTCCAGTCTTGCTTTGGGAAGTGTCTAGAGGCTaGACGAGCAAATCCCAACCAGTCAAGGGTGGGAGA +
Preference number: 3 (lower is better)
Translates to: MCPVLLWEVSRG*TSKSQPVKGGR
Trigger: TCTCCCACCCTTGACTGGTTGGGATTTGCTCGTCCAGCCTCTAGACACTTCCCAAAGCAAGACTGGACACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CAA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGGAGACTGACTCACAATaGGCTCTCGTGTTGTTTGTG +
Preference number: 3 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWETDSQ*ALVLFV
Trigger: CACAAACAACACGAGAGCCAATTGTGAGTCAGTCTC...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CAA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGATTCATTCTGGGATATaGGAGGGGTGGTCACCCAAA +
Preference number: 3 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWIHSGI*EGWSPK
Trigger: TTTGGGTGACCACCCCTCCAATATCCCAGAATGAAT...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CAA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCTACATCCTATTGCCCTaGCACCAACACCAACAAAAT +
Preference number: 3 (lower is better)
Translates to: KESATASISLSRLRPALPYILLP*HQHQQN
Trigger: ATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTA...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CAA 90 bp TCCTCCAACTCTTCAGGGGTTCTGTGCATCCCCATCTTCTTCCGGGTTGATTTTGTTTGGGCGCAGAGTTaGGGCTCAGAGACTGAACCA +
Preference number: 3 (lower is better)
Translates to: SSNSSGVLCIPIFFRVDFVWAQS*GSETEP
Trigger: TGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAAC...AAAATCAACCCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGAGTTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
3UTR-3UTR CAA 90 bp CCAAACATTGGTAGAAGAGTGCTTCAGGCTTGTGCCTCCACTGAATTTCCCCAGCAATTGGCTCTCGTGTaGTTTGTGATGGCAGGGGCA +
Preference number: 3 (lower is better)
Translates to: PNIGRRVLQACASTEFPQQLALV*FVMAGA
Trigger: TGCCCCTGCCATCACAAACAACACGAGAGCCAATTG...CTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CAA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGGTAGGGAGACCCTGCTaGGGTGGTGGAACATACTCT +
Preference number: 3 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKVGRPC*GGGTYS
Trigger: AGAGTATGTTCCACCACCCAAGCAGGGTCTCCCTAC...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CAA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATGAACACACCCTCCCCTaGCTTTCAATGACTGGAGAG +
Preference number: 3 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHEHTLP*LSMTGE
Trigger: CTCTCCAGTCATTGAAAGCAAGGGGAGGGTGTGTTC...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR TCA 72 bp ACTCTGGCTAAACCAGGATCATCATCCCCATTAGCTTaGGAGGCTACTAGGGACCACTGCAAGCTGAAGGAC +
Preference number: 3 (lower is better)
Translates to: TLAKPGSSSPLA*EATRDHCKLKD
Trigger: GTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTCTCAAGCTAATGGGGATGATGATCCTGGTTTAGCCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR CCA 72 bp TCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTTTaGGCTCAGAGACTGAACCAAATCCAACAAAGATGT +
Preference number: 3 (lower is better)
Translates to: SGGIALRFGRRV*AQRLNQIQQRC
Trigger: ACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
3UTR CCA 72 bp AAGAGATCCGCTGTTAGTCTGATGGGCTTCCCTTTGTaGGTAACCCAACCTTTCTCTCTGGCTGCCCTTAAC +
Preference number: 3 (lower is better)
Translates to: KRSAVSLMGFPL*VTQPFSLAALN
Trigger: GTTAAGGGCAGCCAGAGAGAAAGGTTGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR-3UTR CAA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGCAATTGGCTCTCGTGTaGTTTGTGATGGCAGGGGCA +
Preference number: 3 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKQLALV*FVMAGA
Trigger: TGCCCCTGCCATCACAAACAACACGAGAGCCAATTG...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CAA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATGTGGTCACCCAAACATaGGTAGAAGAGTGCTTCAGG +
Preference number: 3 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHVVTQT*VEECFR
Trigger: CCTGAAGCACTCTTCTACCAATGTTTGGGTGACCAC...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR TCA 72 bp GGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACTaGCTAAGTCTTACTCCCAGTTTAGTTGGGGTTGGT +
Preference number: 3 (lower is better)
Translates to: GCPGWYDFVYQH*LSLTPSLVGVG
Trigger: ACCAACCCCAACTAAACTGGGAGTAAGACTTAGTCAGTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR TCA 72 bp CTCTCCCCTGATTCTCTGGCCAGAAGATCTCTATTATaGACTTGGTGCCGGAAGCAGGGACAAGTGAAGAGT +
Preference number: 3 (lower is better)
Translates to: LSPDSLARRSLL*TWCRKQGQVKS
Trigger: ACTCTTCACTTGTCCCTGCTTCCGGCACCAAGTTCATAATAGAGATCTTCTGGCCAGAGAATCAGGGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CCA 72 bp CCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTaGAACATACTCTGGCAAGTAGAGATGGTTCTTTGG +
Preference number: 3 (lower is better)
Translates to: PVRKSRETLLGW*NILWQVEMVLW
Trigger: CCAAAGAACCATCTCTACTTGCCAGAGTATGTTCCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR TCA 72 bp AGAAGAAGCTTTGTCTCCTGCTGGGCCAGCAGATGCTaGAGGCGCTCCTTTTCAATTTCCAGTTCCATTTTC +
Preference number: 3 (lower is better)
Translates to: RRSFVSCWASRC*RRSFSISSSIF
Trigger: GAAAATGGAACTGGAAATTGAAAAGGAGCGCCTTCAGCATCTGCTGGCCCAGCAGGAGACAAAGCTTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR CCA 72 bp TCTGGAATGGGTGACTGTGGGCATGGGAGTAGTCTATaGGAGTCAAGTACACTTAAGCTAGTCATGACACAG +
Preference number: 3 (lower is better)
Translates to: SGMGDCGHGSSL*ESSTLKLVMTQ
Trigger: CTGTGTCATGACTAGCTTAAGTGTACTTGACTCCCATAGACTACTCCCATGCCCACAGTCACCCATTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CCA 72 bp TTTGTAAACATTGATTGGTTTTTCTCTCACAGGAGTTaGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCG +
Preference number: 3 (lower is better)
Translates to: FVNIDWFFSHRS*AAGWAMVRHYP
Trigger: CGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACTCCTGTGAGAGAAAAACCAATCAATGTTTACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CAA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCCAATTGGCTCTCGTGTaGTTTGTGATGGCAGGGGCA +
Preference number: 3 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPQLALV*FVMAGA
Trigger: TGCCCCTGCCATCACAAACAACACGAGAGCCAATTG...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CAA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGAGCCCATTGAGCTCTTaGGTTATGGGATGGGCAGCT +
Preference number: 3 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVSPLSS*VMGWAA
Trigger: AGCTGCCCATCCCATAACCAAAGAGCTCAATGGGCT...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CAA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATTGGGATGAAACCGATTaGGTTACTCTCAGAGGTGAA +
Preference number: 3 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHWDETD*VTLRGE
Trigger: TTCACCTCTGAGAGTAACCAAATCGGTTTCATCCCA...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CAA 90 bp CCTCACCCTACTTTCATGGACACTGTGGCCTCATCATTCTTGCTTTCATCTGGGTGTCACTGTCCCTCTTaGGGGTCTACATGTATCTTT +
Preference number: 3 (lower is better)
Translates to: PHPTFMDTVASSFLLSSGCHCPS*GSTCIF
Trigger: AAAGATACATGTAGACCCCAAAGAGGGACAGTGACA...CCCAGATGAAAGCAAGAATGATGAGGCCACAGTGTCCATGAAAGTAGGGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592611.5
3UTR-3UTR CAA 90 bp TCACCCTACTTTCATGGACACTGTGGCCTCATCATTCTTGCTTTCATCTGGGCTAGGTCTTTGCTTGGTTaGATAGTAGGTCTGTGGTCT +
Preference number: 3 (lower is better)
Translates to: SPYFHGHCGLIILAFIWARSLLG*IVGLWS
Trigger: AGACCACAGACCTACTATCAAACCAAGCAAAGACCT...AGCCCAGATGAAAGCAAGAATGATGAGGCCACAGTGTCCATGAAAGTAGGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592611.5
3UTR-3UTR CAA 90 bp GCTTTTTCAAAGTTTCAATGGGTTGCAGTGCCCCACCACCATGCACCAGAGATGTGCAGACTTAGGTCTTaGCTTGGTTTGATAGTAGGT +
Preference number: 3 (lower is better)
Translates to: AFSKFQWVAVPHHHAPEMCRLRS*LGLIVG
Trigger: ACCTACTATCAAACCAAGCAAAGACCTAAGTCTGCA...CATCTCTGGTGCATGGTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR CAA 90 bp TTTCCTGAAAACAGCACACTGATGGGTCTTGACTCTTTATCCAATTTGCCAGTCCTGATGGGCTTCCCTTaGTGGGTAACCCAACCTTTC +
Preference number: 3 (lower is better)
Translates to: FPENSTLMGLDSLSNLPVLMGFP*WVTQPF
Trigger: GAAAGGTTGGGTTACCCACAAAGGGAAGCCCATCAG...GACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTTTTCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR TCA 72 bp CACCAGAGATGCCCAAGAAAGCCGACAATAACTGCATaGTTCTGGATGTGTCTTAGGATGTTGAGGGGTCAT +
Preference number: 3 (lower is better)
Translates to: HQRCPRKPTITA*FWMCLRMLRGH
Trigger: ATGACCCCTCAACATCCTAAGACACATCCAGAATCATGCAGTTATTGTCGGCTTTCTTGGGCATCTCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR GCA 72 bp AGGAACCATCCAGTTCCACAGATGAACACTGGAGAGTaGTTTTTCTACTGGATACCTGCTGTTCCTGCATTC +
Preference number: 3 (lower is better)
Translates to: RNHPVPQMNTGE*FFYWIPAVPAF
Trigger: GAATGCAGGAACAGCAGGTATCCAGTAGAAAAAGCACTCTCCAGTGTTCATCTGTGGAACTGGATGGTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR GCA 72 bp GGTCATGTTTGTAGGATGGCTGTCATGAACACGATCTaGAGCAAGTCTATGACCACAGCATTGACTAGGAGT +
Preference number: 3 (lower is better)
Translates to: GHVCRMAVMNTI*SKSMTTALTRS
Trigger: ACTCCTAGTCAATGCTGTGGTCATAGACTTGCTGCAGATCGTGTTCATGACAGCCATCCTACAAACATGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR CCA 72 bp TTTGTGGCGTTCTCTGTATTTCCTGAATCTGAATGTTaGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGA +
Preference number: 3 (lower is better)
Translates to: FVAFSVFPESEC*PALLDWGSSPG
Trigger: TCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAGATTCAGGAAATACAGAGAACGCCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR-3UTR CAA 90 bp TGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCATCATGTGCAATTCTTCTaGTGGCATTTTCTCTGTTGG +
Preference number: 3 (lower is better)
Translates to: WAQSLGSETEPNPTKMSHHVQFF*WHFLCW
Trigger: CCAACAGAGAAAATGCCACAAGAAGAATTGCACATG...ATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR CAA 90 bp TCTTCTGAGATCTGCTTTTTCAAAGTTTCAATGGGTTGCAGTGCCCCACCACCAATGTGTCTTAGGATGTaGAGGGGTCATGTTTGTAGG +
Preference number: 3 (lower is better)
Translates to: SSEICFFKVSMGCSAPPPMCLRM*RGHVCR
Trigger: CCTACAAACATGACCCCTCAACATCCTAAGACACAT...TGGTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAAAGCAGATCTCAGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR GCA 72 bp TTTGCTTGGTTTGATAGTAGGTCTGTGGTCTGGCTATaGTCAAGTAGGAACCATCCAGTTCCACAGATGAAC +
Preference number: 3 (lower is better)
Translates to: FAWFDSRSVVWL*SSRNHPVPQMN
Trigger: GTTCATCTGTGGAACTGGATGGTTCCTACTTGAGCATAGCCAGACCACAGACCTACTATCAAACCAAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR CCA 72 bp AGACTTAGGTCTTTGCTTGGTTTGATAGTAGGTCTGTaGTCTGGCTATGCTCAAGTAGGAACCATCCAGTTC +
Preference number: 3 (lower is better)
Translates to: RLRSLLGLIVGL*SGYAQVGTIQF
Trigger: GAACTGGATGGTTCCTACTTGAGCATAGCCAGACCACAGACCTACTATCAAACCAAGCAAAGACCTAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR CCA 72 bp ATGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTaGATAATATCCTGCAGAGTGTTTTCCAACTTGGTT +
Preference number: 3 (lower is better)
Translates to: MLACLARLGKFS*IISCRVFSNLV
Trigger: AACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR-3UTR CAA 90 bp TTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCATCCAGTTTGAGTTCTaGGGGTTTAGTAAGCTGTTT +
Preference number: 3 (lower is better)
Translates to: FGRRVWAQRLNQIQQRCLIQFEF*GFSKLF
Trigger: AAACAGCTTACTAAACCCCAAGAACTCAAACTGGAT...GAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590617.5
3UTR TCA 72 bp CTCCTGGAAAGCGGACTGTTAGCAAAAGCTTTTCTATaGTTCACTTTGGTTCTCTGCATCAAGAACTGTGGG +
Preference number: 3 (lower is better)
Translates to: LLESGLLAKAFL*FTLVLCIKNCG
Trigger: CCCACAGTTCTTGATGCAGAGAACCAAAGTGAATCATAGAAAAGCTTTTGCTAACAGTCCGCTTTCCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR TCA 72 bp TCTGCATGTGAGATGGGTTTCCTGAAAACAGCACACTaGTGGGTCTTGACTCTTTATCCAATTTGCCAGTCT +
Preference number: 3 (lower is better)
Translates to: SACEMGFLKTAH*WVLTLYPICQS
Trigger: AGACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTTTTCAGGAAACCCATCTCACATGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR CCA 72 bp CCACAGAAAGCTCCACACTCCAAAGGCTTTTTGATATaGGATGAAACCGATTTGGTTACTCTCAGAGGTGAA +
Preference number: 3 (lower is better)
Translates to: PQKAPHSKGFLI*DETDLVTLRGE
Trigger: TTCACCTCTGAGAGTAACCAAATCGGTTTCATCCCATATCAAAAAGCCTTTGGAGTGTGGAGCTTTCTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CCA 72 bp TGCAGTTTCTTCCTAGCCTTGATGGTCTTTACATTTTaGCATGATTTTGCAGCAGCTGGTACCAGTTGTTCC +
Preference number: 3 (lower is better)
Translates to: CSFFLALMVFTF*HDFAAAGTSCS
Trigger: GGAACAACTGGTACCAGCTGCTGCAAAATCATGCCAAAATGTAAAGACCATCAAGGCTAGGAAGAAACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR TCA 72 bp TCAGGCACAAAGGAAGCTATAGCACATATTGTTAAGTaGCGTTCTGATTGCCTAGAAATGGCAGCACATGCA +
Preference number: 3 (lower is better)
Translates to: SGTKEAIAHIVK*RSDCLEMAAHA
Trigger: TGCATGTGCTGCCATTTCTAGGCAATCAGAACGTCACTTAACAATATGTGCTATAGCTTCCTTTGTGCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592521.5
3UTR TCA 72 bp TTTCTTCCTAGCCTTGATGGTCTTTACATTTTGGCATaGTTTTGCAGCAGCTGGTACCAGTTGTTCCTTTCC +
Preference number: 3 (lower is better)
Translates to: FLPSLDGLYILA*FCSSWYQLFLS
Trigger: GGAAAGGAACAACTGGTACCAGCTGCTGCAAAATCATGCCAAAATGTAAAGACCATCAAGGCTAGGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR GCA 72 bp GTGCAATTCTTCTTGTGGCATTTTCTCTGTTGGGACTaGAGGTTTTCTCCCTGGAGATTCACAATTACATGT +
Preference number: 3 (lower is better)
Translates to: VQFFLWHFLCWD*RFSPWRFTITC
Trigger: ACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGAAAATGCCACAAGAAGAATTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR GCA 72 bp CTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTaGAGAGTGTTTTCCAACTTGGTTCTTGGAAACTCT +
Preference number: 3 (lower is better)
Translates to: LARLGKFSWIIS*RVFSNLVLGNS
Trigger: AGAGTTTCCAAGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR GCA 72 bp AACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTaGTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTG +
Preference number: 3 (lower is better)
Translates to: NFGESDNYVSWS*SSRGVSLWRSL
Trigger: CAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR CCA 72 bp CTTCATGTGCAATTCTTCTTGTGGCATTTTCTCTGTTaGGACTGCAGGTTTTCTCCCTGGAGATTCACAATT +
Preference number: 3 (lower is better)
Translates to: LHVQFFLWHFLC*DCRFSPWRFTI
Trigger: AATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGAAAATGCCACAAGAAGAATTGCACATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR-3UTR CAA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTAGCCCATTGAGCTCTTaGGTTATGGGATGGGCAGCT +
Preference number: 3 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSISPLSS*VMGWAA
Trigger: AGCTGCCCATCCCATAACCAAAGAGCTCAATGGGCT...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR-3UTR CAA 90 bp CTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCATGTGAGATGGGTTTCCAGTTTCTTCCTAGCCTaGATGGTCTTTACATTTTGG +
Preference number: 3 (lower is better)
Translates to: LHPFILSLCVSLHVRWVSSFFLA*MVFTFW
Trigger: CCAAAATGTAAAGACCATCAAGGCTAGGAAGAAACT...GGAAACCCATCTCACATGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR TCA 72 bp CCAGATCCTTTCTCTTGGGATAGTCTGCAACAGCTTTaGGGCTCTGTAACAACCTTTCATTCATATGTATGT +
Preference number: 3 (lower is better)
Translates to: PDPFSWDSLQQL*GSVTTFHSYVC
Trigger: ACATACATATGAATGAAAGGTTGTTACAGAGCCTCAAAGCTGTTGCAGACTATCCCAAGAGAAAGGATCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR TCA 72 bp CCCTCTTTGGGGTCTACATGTATCTTTCTTTTGACATaGCCACTGGGCATCATCTTTCATATGCGAATGAAA +
Preference number: 3 (lower is better)
Translates to: PSLGSTCIFLLT*PLGIIFHMRMK
Trigger: TTTCATTCGCATATGAAAGATGATGCCCAGTGGTCATGTCAAAAGAAAGATACATGTAGACCCCAAAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR GCA 72 bp AGGGCAAGTCTGGTGGTGAGAAAATCTCTCAGCATTTaGTTGTCTGTAAAGGATTTTATTTCTCCTTCACTT +
Preference number: 3 (lower is better)
Translates to: RASLVVRKSLSI*LSVKDFISPSL
Trigger: AAGTGAAGGAGAAATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTCTCACCACCAGACTTGCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR CCA 72 bp CAGGTTTTCTCCCTGGAGATTCACAATTACATGTTGTaGTCTCTGATGGTATCTTATCTAGATCATCTTTGG +
Preference number: 3 (lower is better)
Translates to: QVFSLEIHNYML*SLMVSYLDHLW
Trigger: CCAAAGATGATCTAGATAAGATACCATCAGAGACCACAACATGTAATTGTGAATCTCCAGGGAGAAAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
3UTR TCA 72 bp GCAATATGTCAAATGAAAAATATATCTTCCAGAATCTaGTTCTCCTCCAACTCTTCAGGGGTTCTGTGCATC +
Preference number: 3 (lower is better)
Translates to: AICQMKNISSRI*FSSNSSGVLCI
Trigger: GATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATATTTTTCATTTGACATATTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
3UTR CCA 72 bp GAAGGAAACACTCTTGAAATGAGGCTGAATATGCAATaGTTTCCACCACGCAGAAAGTATCCTATGTTAATT +
Preference number: 3 (lower is better)
Translates to: EGNTLEMRLNMQ*FPPRRKYPMLI
Trigger: AATTAACATAGGATACTTTCTGCGTGGTGGAAACCATTGCATATTCAGCCTCATTTCAAGAGTGTTTCCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
3UTR-3UTR CAA 90 bp AGTCTGGTGGTGAGAAAATCTCTCAGCATTTGCTTGTCTGTAAAGGATTTTATTAGAGTGTTTTCCAACTaGGTTCTTGGAAACTCTAAA +
Preference number: 3 (lower is better)
Translates to: SLVVRKSLSICLSVKDFIRVFSN*VLGNSK
Trigger: TTTAGAGTTTCCAAGAACCAAGTTGGAAAACACTCT...AATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTCTCACCACCAGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR CCA 72 bp TTGTGGTCTCTGATGGTATCTTATCTAGATCATCTTTaGGATGATGAAGGGTTACTGGTTTCAAAGAATTAT +
Preference number: 3 (lower is better)
Translates to: LWSLMVSYLDHL*DDEGLLVSKNY
Trigger: ATAATTCTTTGAAACCAGTAACCCTTCATCATCCCAAAGATGATCTAGATAAGATACCATCAGAGACCACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATGCCACGCAGACTCGCTaGATGCAGGCTGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHATQTR*MQAALG
Trigger: ACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGC...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTCCTCCGCTCTCGGACTaGCACGCGACGGCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGPPLSD*HATARP
Trigger: GGGGCGAGCCGTCGCGTGGCAGTCCGAGAGCGGAGG...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587139.5
CDS-3UTR GCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATCGCAGACTCGCTGCATaGAGGCTGCCCTGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHRRLAA*RLPWVV
Trigger: TACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCG...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACGCCACGCAGACTCGCTaGATGCAGGCTGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYATQTR*MQAALG
Trigger: ACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGC...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCAAGGCTGGGTGGAGGTaGCAGCGCCAGTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPKAGWR*QRQSQP
Trigger: AGGCTGAGACTGGCGCTGTCACCTCCACCCAGCCTT...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCCTGCCTCAGCCTCCTaGGTAGCCGGGACTACAGGT +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYPASAS*VAGTTG
Trigger: ACCTGTAGTCCCGGCTACTCAGGAGGCTGAGGCAGG...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS-3UTR GCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTCGCAGACTCGCTGCATaGAGGCTGCCCTGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSARRLAA*RLPWVV
Trigger: TACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCG...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTCGCAGACTCGCTGCATaGAGGCTGCCCTGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGRRLAA*RLPWVV
Trigger: TACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCG...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACGACTTCGTCCAGCTCTaGCCCATCAGGCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYDFVQL*PIRPLL
Trigger: GAGGAGAGGCCTGATGGGGCAGAGCTGGACGAAGTC...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CAA 72 bp CTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATaGAGCTCTTTGGTTATGGGATGGGCAGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPRIGWVSPSSP*SSLVMGWAAAR
Trigger: CCTGGCAGCTGCCCATCCCATAACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTCGAGCAGAGCACCTGTaGGGCCTGGTCAGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSARAEHL*GLVSLY
Trigger: ATACAAGCTGACCAGGCCTCACAGGTGCTCTGCTCG...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGAAGGCTGGGTGGAGGTaGCAGCGCCAGTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWKAGWR*QRQSQP
Trigger: AGGCTGAGACTGGCGCTGTCACCTCCACCCAGCCTT...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACTCACCCAGGCTGGAGTaGAGCGGCATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYSPRLE*SGMILA
Trigger: AGCCAAGATCATGCCGCTGCACTCCAGCCTGGGTGA...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS-3UTR CCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCAGGCCCCAGCTTCTCTaGAGGGATAGCGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPRPQLL*RDSAEV
Trigger: AACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCT...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATTCTTTGGTTATGGGATaGGCAGCTGCCAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHSLVMG*AAARLM
Trigger: CATCAGCCTGGCAGCTGCCCATCCCATAACCAAAGA...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATGAGACCCTGCTTGGGTaGTGGAACATACTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHETLLG*WNILWQ
Trigger: TTGCCAGAGTATGTTCCACCACCCAAGCAGGGTCTC...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp CATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGGGAAGCAGATCTTTGTaGAGATTCCTGGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: HDSRPQLLWRDSAEVWAQGSRSL*RFLGGR
Trigger: CCTCCCGCCCAGGAATCTCCACAAAGATCTGCTTCC...CTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR TCA 90 bp GGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTTTGGGCTTCCAGTCGAGACTGGTaGAGCTGCTGCTGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: GPSFSGGIALRFGRRVWASSRDW*SCCCFR
Trigger: TCTAAAACAGCAGCAGCTTCACCAGTCTCGACTGGA...AGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR TCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCTCTCGTGTTGTTTGTaGTGGCAGGGGCACCAACTC +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYLSCCL*WQGHQL
Trigger: GAGTTGGTGCCCCTGCCATCACAAACAACACGAGAG...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGGGGCAGCTGCCAGGCTaGTGGCTACTGAGACTGACT +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWGQLPG*WLLRLT
Trigger: AGTCAGTCTCAGTAGCCATCAGCCTGGCAGCTGCCC...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCGCGCCAGTCTCAGCCTaGAGAGACATGAGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPAPVSA*RDMSFG
Trigger: TCCAAAGCTCATGTCTCTTCAGGCTGAGACTGGCGC...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp TTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGGGGCGGGAGGTGGTGTaGTGTAATGATGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: FSGGIALRFGRRVWAQRLGREVV*CNDGEA
Trigger: AGCCTCACCATCATTACAGCACACCACCTCCCGCCC...CAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR CCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCGATAGCGCTGAGGTTTaGGCGCAGAGTTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPDSAEV*AQSLGS
Trigger: TGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATC...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGCTCCCAAGGATTGGCTaGGTCTCACCCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWLPRIG*VSPSSP
Trigger: TGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAG...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACCTTGCTCCCAAGGATTaGCTGGGTCTCACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHLAPKD*LGLTLQ
Trigger: CTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTGTAGAGATGGTTCTTTaGGGCCACGAGCAGAGCACC +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSAVEMVL*GHEQST
Trigger: GGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATTCCATAGGCTTTCTCTaGGTCAAAACGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHSIGFL*VKTRPV
Trigger: CACTGGCCTCGTTTTGACCCAGAGAAAGCCTATGGA...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCCACTGGAGTCTGGAATaGGTGACTGTGGGCATGGGA +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPHWSLE*VTVGMG
Trigger: TCCCATGCCCACAGTCACCCATTCCAGACTCCAGTG...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTTTCTCTCACAGGAGTTaGGCAGCAGGGTGGGCAATG +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSAFSHRS*AAGWAM
Trigger: CATTGCCCACCCTGCTGCCCAACTCCTGTGAGAGAA...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACTTCTCTCACAGGAGTTaGGCAGCAGGGTGGGCAATG +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYFSHRS*AAGWAM
Trigger: CATTGCCCACCCTGCTGCCCAACTCCTGTGAGAGAA...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CAA 72 bp ATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTaGGTTATGGGATGGGCAGCTGCCAGGCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: IGWVSPSSPLSS*VMGWAAARLMA
Trigger: AGCCATCAGCCTGGCAGCTGCCCATCCCATAACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTGTCCCTCTCTCCCCATaGCATTTGGGGTGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGVPLSP*HLGCSR
Trigger: TCTAGAGCACCCCAAATGTCATGGGGAGAGAGGGAC...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTGCTGAGGATAAATCGTaGGTTGGAAGGAGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSAAEDKS*VGRSPP
Trigger: TGGCGGACTCCTTCCAACTCACGATTTATCCTCAGC...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATTTTCTCTGTTGGGACTaGAGGTTTTCTCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHFLCWD*RFSPWR
Trigger: TCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGAAA...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp GATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTAAAGTTTCAATGGGTTaGAGTGCCCCACCACCATGC +
Preference number: 4 (lower is better)
Translates to: DSRPQLLWRDSAEVWAQSKVSMG*SAPPPC
Trigger: GCATGGTGGTGGGGCACTGCAACCCATTGAAACTTT...ACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTTACCGGGAGGTGGTGTaGTGTAATGATGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSAYREVV*CNDGEA
Trigger: AGCCTCACCATCATTACAGCACACCACCTCCCGGTA...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACTACCGGGAGGTGGTGTaGTGTAATGATGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYYREVV*CNDGEA
Trigger: AGCCTCACCATCATTACAGCACACCACCTCCCGGTA...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTTTTGGGCGCAGAGTTTaGGCTCAGAGACTGAACCAA +
Preference number: 4 (lower is better)
Translates to: DSRPQLLWRDSAEVWAQSFGRRV*AQRLNQ
Trigger: TTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAA...ACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACGATAGCGCTGAGGTTTaGGCGCAGAGTTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHDSAEV*AQSLGS
Trigger: TGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATC...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GTCGGAAAGTACCATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGATAGCGCTGAGGTTTaGGCGCAGAGTTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: VGKYHDSRPQLLWRDSAEDSAEV*AQSLGS
Trigger: TGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATC...CTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATGGTACTTTCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGAGGCCCCAGCTTCTCTaGAGGGATAGCGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWRPQLL*RDSAEV
Trigger: AACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCT...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACGTAGAGATGGTTCTTTaGGGCCACGAGCAGAGCACC +
Preference number: 4 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHVEMVL*GHEQST
Trigger: GGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACCACTGGAGTCTGGAATaGGTGACTGTGGGCATGGGA +
Preference number: 4 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHHWSLE*VTVGMG
Trigger: TCCCATGCCCACAGTCACCCATTCCAGACTCCAGTG...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp TTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGTTCCTGGGCGGGAGGTaGTGTGCTGTAATGATGGTG +
Preference number: 4 (lower is better)
Translates to: FSGGIALRFGRRVWAQRLFLGGR*CAVMMV
Trigger: CACCATCATTACAGCACACCACCTCCCGCCCAGGAA...CAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586135.1
3UTR CAA 72 bp GGCACTATCCGCAACGCCCTCGGCATGTGTCCAGTCTaGCTTTGGGAAGTGTCTAGAGGCTGGACGAGCAAA +
Preference number: 4 (lower is better)
Translates to: GTIRNALGMCPV*LWEVSRGWTSK
Trigger: TTTGCTCGTCCAGCCTCTAGACACTTCCCAAAGCAAGACTGGACACATGCCGAGGGCGTTGCGGATAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACGTAGGATGGCTGTCATaGACACGATCTGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYVGWLS*TRSAAS
Trigger: ACTTGCTGCAGATCGTGTTCATGACAGCCATCCTAC...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACCACCCTCCAGCCCATTaGGCTCTTTGGTTATGGGAT +
Preference number: 4 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHHPPAH*ALWLWD
Trigger: ATCCCATAACCAAAGAGCTCAATGGGCTGGAGGGTG...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTGGCTTGTGCCTCCACTaGATTTCCCCAGGACTAATC +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGGLCLH*ISPGLI
Trigger: GATTAGTCCTGGGGAAATTCAGTGGAGGCACAAGCC...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACTCAAAACGAGGCCAGTaGGAAAAAGTAGGGAGACCC +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYSKRGQ*EKVGRP
Trigger: GGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGA...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTAGACAGCAGACAGGATaGGGTCTGCACTGCATAACT +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSARQQTG*GLHCIT
Trigger: AGTTATGCAGTGCAGACCTCATCCTGTCTGCTGTCT...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGGCTGAGGATAAATCGTaGGTTGGAAGGAGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: EATRDHCKLKDPSQELCGAEDKS*VGRSPP
Trigger: TGGCGGACTCCTTCCAACTCACGATTTATCCTCAGC...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp CATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGTTTCTCTGTTGGGACTaGAGGTTTTCTCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: HDSRPQLLWRDSAEVWAQFLCWD*RFSPWR
Trigger: TCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGAAA...CTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACAAAGTAGGGAGACCCTaGTTGGGTGGTGGAACATAC +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYKVGRP*LGGGTY
Trigger: GTATGTTCCACCACCCAAGCAGGGTCTCCCTACTTT...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTAAAGTAGGGAGACCCTaGTTGGGTGGTGGAACATAC +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSAKVGRP*LGGGTY
Trigger: GTATGTTCCACCACCCAAGCAGGGTCTCCCTACTTT...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATTTCACTTTGGTTCTCTaGATCAAGAACTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHFTLVL*IKNCGP
Trigger: AGGCCCACAGTTCTTGATGCAGAGAACCAAAGTGAA...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATGAGTGCTTTTTCTACTaGATACCTGCTGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHECFFY*IPAVPA
Trigger: TGCAGGAACAGCAGGTATCCAGTAGAAAAAGCACTC...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp GGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTTTGGGCTGAGTGCTTTTTCTACTaGATACCTGCTGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GPSFSGGIALRFGRRVWAECFFY*IPAVPA
Trigger: TGCAGGAACAGCAGGTATCCAGTAGAAAAAGCACTC...AGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp CATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTAGGTCTGTGGTCTaGCTATGCTCAAGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: HDSRPQLLWRDSAEVWAQSRSVV*LCSSRN
Trigger: GTTCCTACTTGAGCATAGCCAGACCACAGACCTACT...CTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp CATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGTGGCATTTTCTCTGTTaGGACTGCAGGTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: HDSRPQLLWRDSAEVWAQWHFLC*DCRFSP
Trigger: GGGAGAAAACCTGCAGTCCCAACAGAGAAAATGCCA...CTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTTCTTTGGTTATGGGATaGGCAGCTGCCAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGSLVMG*AAARLM
Trigger: CATCAGCCTGGCAGCTGCCCATCCCATAACCAAAGA...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCACCCTGCTTGGGTGGTaGAACATACTCTGGCAAGTA +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPTLLGW*NILWQV
Trigger: TACTTGCCAGAGTATGTTCCACCACCCAAGCAGGGT...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACTCCATAGGCTTTCTCTaGGTCAAAACGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYSIGFL*VKTRPV
Trigger: CACTGGCCTCGTTTTGACCCAGAGAAAGCCTATGGA...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGGCAGGCTGCCCTGGGTaGTATGACTTTGTCTACCAA +
Preference number: 4 (lower is better)
Translates to: EATRDHCKLKDPSQELCGAGCPG*YDFVYQ
Trigger: TTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGC...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTGAAGTGTCTAGAGGCTaGACGAGCAAATCCCAACCA +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSAEVSRG*TSKSQP
Trigger: TGGTTGGGATTTGCTCGTCCAGCCTCTAGACACTTC...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGTTCGGTAGTGAGCGCTaGGAAGCATCTGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWFGSER*EASEPC
Trigger: ACACGGCTCAGATGCTTCCCAGCGCTCACTACCGAA...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587139.5
CDS-3UTR CCA 90 bp GGTGAAGCTGCTGCTGTTTTAGAAGAAGCTTTGTCTCCTGCTGGGCCAGCAGATCAAGGACCTCCCTCTTaGCACTCCCTCTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GEAAAVLEEALSPAGPADQGPPS*HSLWLH
Trigger: GTGGAGCCAGAGGGAGTGCCAAGAGGGAGGTCCTTG...ATCTGCTGGCCCAGCAGGAGACAAAGCTTCTTCTAAAACAGCAGCAGCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592611.5
3UTR CAA 72 bp GCTGCCAGGCTGATGGCTACTGAGACTGACTCACAATaGGCTCTCGTGTTGTTTGTGATGGCAGGGGCACCA +
Preference number: 4 (lower is better)
Translates to: AARLMATETDSQ*ALVLFVMAGAP
Trigger: TGGTGCCCCTGCCATCACAAACAACACGAGAGCCAATTGTGAGTCAGTCTCAGTAGCCATCAGCCTGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp CATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGATCCAGTTCCACAGATaGACACTGGAGAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: HDSRPQLLWRDSAEVWAQIQFHR*TLESAF
Trigger: AAAAGCACTCTCCAGTGTTCATCTGTGGAACTGGAT...CTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR TCA 90 bp GATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTCCGACAATAACTGCATaGTTCTGGATGTGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: DSRPQLLWRDSAEVWAQSPTITA*FWMCLR
Trigger: CCTAAGACACATCCAGAATCATGCAGTTATTGTCGG...ACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR TCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGTGGGCCAGCAGATGCTaGAGGCGCTCCTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWWASRC*RRSFSI
Trigger: AATTGAAAAGGAGCGCCTTCAGCATCTGCTGGCCCA...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp GGGATAGCGCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCTGGGCCAGCAGATGCTaGAGGCGCTCCTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: GIALRFGRRVWAQRLNQIWASRC*RRSFSI
Trigger: AATTGAAAAGGAGCGCCTTCAGCATCTGCTGGCCCA...GATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR TCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACTCCAGTCGAGACTGGTaGAGCTGCTGCTGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHSSRDW*SCCCFR
Trigger: TCTAAAACAGCAGCAGCTTCACCAGTCTCGACTGGA...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp GGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTTTGGGCTTCTTTCATATGCGAATaGAACCCAACTGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GPSFSGGIALRFGRRVWASFICE*NPTVFL
Trigger: GAGGAAGACAGTTGGGTTTCATTCGCATATGAAAGA...AGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR TCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGCACCCTCCAGCCCATTaGGCTCTTTGGTTATGGGAT +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWHPPAH*ALWLWD
Trigger: ATCCCATAACCAAAGAGCTCAATGGGCTGGAGGGTG...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATTGGTTGATATTCTGCTaGAAGCCCATCTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHWLIFC*KPISAF
Trigger: AAAAGCAGAGATGGGCTTTCAGCAGAATATCAACCA...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp GATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTAAAGGGTACGCCCAATaGCCCTTTACAAATTCACCT +
Preference number: 4 (lower is better)
Translates to: DSRPQLLWRDSAEVWAQSKGYAQ*PFTNSP
Trigger: AGGTGAATTTGTAAAGGGTCATTGGGCGTACCCTTT...ACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR TCA 90 bp ATGGCTGTCATGAACACGATCTGCAGCAAGTCTATGACCACAGCATTGACTAGGCCACGTCCGCCATCTTaGAACAACCGCCACTCGGGG +
Preference number: 4 (lower is better)
Translates to: MAVMNTICSKSMTTALTRPRPPS*NNRHSG
Trigger: CCCCGAGTGGCGGTTGTTTCAAGATGGCGGACGTGG...CCTAGTCAATGCTGTGGTCATAGACTTGCTGCAGATCGTGTTCATGACAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592611.5
CDS-3UTR GCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACTCTGTGGTCTGGCTATaGTCAAGTAGGAACCATCCA +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYSVVWL*SSRNHP
Trigger: TGGATGGTTCCTACTTGAGCATAGCCAGACCACAGA...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp CATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGGTCATGAACACGATCTaGAGCAAGTCTATGACCACA +
Preference number: 4 (lower is better)
Translates to: HDSRPQLLWRDSAEVWAQVMNTI*SKSMTT
Trigger: TGTGGTCATAGACTTGCTGCAGATCGTGTTCATGAC...CTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACACCATGCACCAGAGATaGCCAAGAAAGCCGACAATA +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYTMHQR*PRKPTI
Trigger: TATTGTCGGCTTTCTTGGGCATCTCTGGTGCATGGT...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTAAAGTTTCAATGGGTTaGAGTGCCCCACCACCATGC +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGKVSMG*SAPPPC
Trigger: GCATGGTGGTGGGGCACTGCAACCCATTGAAACTTT...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGTCTTCAGGGGTTCTGTaGATCCCCATCTTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWSSGVL*IPIFFR
Trigger: CCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGA...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGAGCCACGCAGACTCGCTaGATGCAGGCTGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGATQTR*MQAALG
Trigger: ACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGC...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACCCATCCACCCATTTCTaGCATACCACAGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHPSTHF*HTTESS
Trigger: GGAGCTTTCTGTGGTATGGCAGAAATGGGTGGATGG...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACAGGCAGATTCCTTTGTaGCAGATCCTTTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYRQIPL*QILSLG
Trigger: CCCAAGAGAAAGGATCTGGCACAAAGGAATCTGCCT...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCCCGGCATCCAAATGCTaGTTCTGTTCTGTATACCTC +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPPASKC*FCSVYL
Trigger: GAGGTATACAGAACAGAAGCAGCATTTGGATGCCGG...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS-3UTR CCA 90 bp CATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGGTCACTGTCCCTCTTTaGGGTCTACATGTATCTTTC +
Preference number: 4 (lower is better)
Translates to: HDSRPQLLWRDSAEVWAQVTVPL*GLHVSF
Trigger: GAAAGATACATGTAGACCCCAAAGAGGGACAGTGAC...CTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACTCTCATACCGGGAGGTaGTGTGCTGTAATGATGGTG +
Preference number: 4 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHSHTGR*CAVMMV
Trigger: CACCATCATTACAGCACACCACCTCCCGGTATGAGA...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTTTTGGGCGCAGAGTTTaGGCTCAGAGACTGAACCAA +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGFGRRV*AQRLNQ
Trigger: TTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAA...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGTTTGGGCGCAGAGTTTaGGCTCAGAGACTGAACCAA +
Preference number: 4 (lower is better)
Translates to: EATRDHCKLKDPSQELCGFGRRV*AQRLNQ
Trigger: TTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAA...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTTTCATTCTGGGATATTaGAGGGGTGGTCACCCAAAC +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSAFILGY*RGGHPN
Trigger: GTTTGGGTGACCACCCCTCCAATATCCCAGAATGAA...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACACCCTGCTTGGGTGGTaGAACATACTCTGGCAAGTA +
Preference number: 4 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHTLLGW*NILWQV
Trigger: TACTTGCCAGAGTATGTTCCACCACCCAAGCAGGGT...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGGAGACCCTGCTTGGGTaGTGGAACATACTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWETLLG*WNILWQ
Trigger: TTGCCAGAGTATGTTCCACCACCCAAGCAGGGTCTC...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGGCAGGCTGCCCTGGGTaGTATGACTTTGTCTACCAA +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWAGCPG*YDFVYQ
Trigger: TTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGC...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCGCCCAGCACCTAGACTaGGGCCGAGCAGCACGTCCC +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPAQHLD*GRAARP
Trigger: GGGACGTGCTGCTCGGCCCCAGTCTAGGTGCTGGGC...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587139.5
CDS-3UTR CCA 90 bp GGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTTTGGGCTACCTGTGGGTCTTGTTaGAAAGCAAATTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: GPSFSGGIALRFGRRVWATCGSC*KANSDP
Trigger: TGGATCAGAATTTGCTTTCCAACAAGACCCACAGGT...AGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586135.1
3UTR CAA 72 bp GGACGAGCAAATCCCAACCAGTCAAGGGTGGGAGACTaGAGACGGAGGAAAGGCAGATTCCTTTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GRANPNQSRVGD*RRRKGRFLCAR
Trigger: TCTGGCACAAAGGAATCTGCCTTTCCTCCGTCTCAAGTCTCCCACCCTTGACTGGTTGGGATTTGCTCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CAA 72 bp GCCAAGAGATCCGCTGTTAGTCTGATGGGCTTCCCTTaGTGGGTAACCCAACCTTTCTCTCTGGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: AKRSAVSLMGFP*WVTQPFSLAAL
Trigger: AAGGGCAGCCAGAGAGAAAGGTTGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR TCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTATCCAGTTCCACAGATaGACACTGGAGAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSAIQFHR*TLESAF
Trigger: AAAAGCACTCTCCAGTGTTCATCTGTGGAACTGGAT...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGGTAGGATGGCTGTCATaGACACGATCTGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWVGWLS*TRSAAS
Trigger: ACTTGCTGCAGATCGTGTTCATGACAGCCATCCTAC...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGTCCAGTCGAGACTGGTaGAGCTGCTGCTGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWSSRDW*SCCCFR
Trigger: TCTAAAACAGCAGCAGCTTCACCAGTCTCGACTGGA...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp GGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTTTGGGCTTTGATTTTAGAGGACTaGGTCGGAAAGTACCATGAT +
Preference number: 4 (lower is better)
Translates to: GPSFSGGIALRFGRRVWALILED*VGKYHD
Trigger: ATCATGGTACTTTCCGACTCAGTCCTCTAAAATCAA...AGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR TCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATCGAGCAGAGCACCTGTaGGGCCTGGTCAGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHRAEHL*GLVSLY
Trigger: ATACAAGCTGACCAGGCCTCACAGGTGCTCTGCTCG...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp CCAAACATTGGTAGAAGAGTGCTTCAGGCTTGTGCCTCCACTGAATTTCCCCAGGGGACCACTGCAAGCTaGAGGACCCATCTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: PNIGRRVLQACASTEFPQGTTAS*RTHLKS
Trigger: GCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCC...CTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACATGACTGGAGAGTTTTaGACTCTGGCTAAACCAGGA +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYMTGEF*TLAKPG
Trigger: TCCTGGTTTAGCCAGAGTTCAAAACTCTCCAGTCAT...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCATGACTGGAGAGTTTTaGACTCTGGCTAAACCAGGA +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPMTGEF*TLAKPG
Trigger: TCCTGGTTTAGCCAGAGTTCAAAACTCTCCAGTCAT...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTAGTCTGCAACAGCTTTaGGGCTCTGTAACAACCTTT +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSASLQQL*GSVTTF
Trigger: AAAGGTTGTTACAGAGCCTCAAAGCTGTTGCAGACT...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACTCTGTGGTCTGGCTATaGTCAAGTAGGAACCATCCA +
Preference number: 4 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHSVVWL*SSRNHP
Trigger: TGGATGGTTCCTACTTGAGCATAGCCAGACCACAGA...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACTTTCTCTGTTGGGACTaGAGGTTTTCTCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHFLCWD*RFSPWR
Trigger: TCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGAAA...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTGTCATGAACACGATCTaGAGCAAGTCTATGACCACA +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSAVMNTI*SKSMTT
Trigger: TGTGGTCATAGACTTGCTGCAGATCGTGTTCATGAC...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACGTCATGAACACGATCTaGAGCAAGTCTATGACCACA +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYVMNTI*SKSMTT
Trigger: TGTGGTCATAGACTTGCTGCAGATCGTGTTCATGAC...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTACATTGGTAGAAGAGTaGTTCAGGCTTGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGTLVEE*FRLVPP
Trigger: TGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGT...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGCCATCCACCCATTTCTaGCATACCACAGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWPSTHF*HTTESS
Trigger: GGAGCTTTCTGTGGTATGGCAGAAATGGGTGGATGG...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp CATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGTCCACAGATGAACACTaGAGAGTGCTTTTTCTACTG +
Preference number: 4 (lower is better)
Translates to: HDSRPQLLWRDSAEVWAQSTDEH*RVLFLL
Trigger: CAGTAGAAAAAGCACTCTCCAGTGTTCATCTGTGGA...CTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACAGTAGGTCTGTGGTCTaGCTATGCTCAAGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHSRSVV*LCSSRN
Trigger: GTTCCTACTTGAGCATAGCCAGACCACAGACCTACT...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCTCTGAAGCTGAATCCTaGACTGCAGACTTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPSEAES*TADLGL
Trigger: AAGACCTAAGTCTGCAGTCCAGGATTCAGCTTCAGA...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCATTCTCTCCACTGTTTaGGGGGTCTTGGTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPILSTV*GVLVLF
Trigger: AAAAAGCACCAAGACCCCCCAAACAGTGGAGAGAAT...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTGTCACTGTCCCTCTTTaGGGTCTACATGTATCTTTC +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSAVTVPL*GLHVSF
Trigger: GAAAGATACATGTAGACCCCAAAGAGGGACAGTGAC...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp CCTCACCCTACTTTCATGGACACTGTGGCCTCATCATTCTTGCTTTCATCTGGGAGGCCCCAGCTTCTCTaGAGGGATAGCGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PHPTFMDTVASSFLLSSGRPQLL*RDSAEV
Trigger: AACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCT...CCCAGATGAAAGCAAGAATGATGAGGCCACAGTGTCCATGAAAGTAGGGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592611.5
CDS-3UTR CCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACAGGCTGAATATGCAATaGTTTCCACCACGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYRLNMQ*FPPRRK
Trigger: CTTTCTGCGTGGTGGAAACCATTGCATATTCAGCCT...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATCTTGCTCCCAAGGATTaGCTGGGTCTCACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHLAPKD*LGLTLQ
Trigger: CTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGTCCATAGGCTTTCTCTaGGTCAAAACGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWSIGFL*VKTRPV
Trigger: CACTGGCCTCGTTTTGACCCAGAGAAAGCCTATGGA...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATGAGAGTTTTGAACTCTaGCTAAACCAGGATCATCAT +
Preference number: 4 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHESFEL*LNQDHH
Trigger: ATGATGATCCTGGTTTAGCCAGAGTTCAAAACTCTC...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACAGCTTTGGATCTATCTaGATAAGGAGGCTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYSFGSI*IRRLLN
Trigger: GTTGAGCAGCCTCCTTATCCAGATAGATCCAAAGCT...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTTCTCCCCATGACATTTaGGGTGCTCTAGAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGSPHDI*GALEKS
Trigger: GGACTTTTCTAGAGCACCCCAAATGTCATGGGGAGA...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CAA 72 bp CTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTTaGGGCTCAGAGACTGAACCAAATCCAACAAAGATG +
Preference number: 4 (lower is better)
Translates to: LWRDSAEVWAQS*GSETEPNPTKM
Trigger: CATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR TCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTCCGACAATAACTGCATaGTTCTGGATGTGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGPTITA*FWMCLR
Trigger: CCTAAGACACATCCAGAATCATGCAGTTATTGTCGG...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGCCGACAATAACTGCATaGTTCTGGATGTGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: EATRDHCKLKDPSQELCGPTITA*FWMCLR
Trigger: CCTAAGACACATCCAGAATCATGCAGTTATTGTCGG...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp CATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGATCTTTCTTTTGACATaGCCACTGGGCATCATCTTT +
Preference number: 4 (lower is better)
Translates to: HDSRPQLLWRDSAEVWAQIFLLT*PLGIIF
Trigger: AAAGATGATGCCCAGTGGTCATGTCAAAAGAAAGAT...CTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR TCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGGGGCAGCTGCCAGGCTaGTGGCTACTGAGACTGACT +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWGQLPG*WLLRLT
Trigger: AGTCAGTCTCAGTAGCCATCAGCCTGGCAGCTGCCC...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATCAAGGGTGGGAGACTTaGGACGGAGGAAAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHQGWET*DGGKAD
Trigger: ATCTGCCTTTCCTCCGTCTCAAGTCTCCCACCCTTG...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp GTCGGAAAGTACCATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGCTGAAAGGTCCCAAATaGCTTCCTTTGCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: VGKYHDSRPQLLWRDSAELKGPK*LPLQLP
Trigger: TGGAAGTTGCAAAGGAAGTCATTTGGGACCTTTCAG...CTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATGGTACTTTCCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR TCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATTCCTTATTCATGACCTaGTCTCATCTCACTAAAATG +
Preference number: 4 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHSLFMT*SHLTKM
Trigger: CATTTTAGTGAGATGAGATCAGGTCATGAATAAGGA...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS-3UTR GCA 90 bp GGAAAGTACCATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTCTGTGGTCTGGCTATaGTCAAGTAGGAACCATCCA +
Preference number: 4 (lower is better)
Translates to: GKYHDSRPQLLWRDSAEVSVVWL*SSRNHP
Trigger: TGGATGGTTCCTACTTGAGCATAGCCAGACCACAGA...AACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATGGTACTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR GCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTGTCATGAACACGATCTaGAGCAAGTCTATGACCACA +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGVMNTI*SKSMTT
Trigger: TGTGGTCATAGACTTGCTGCAGATCGTGTTCATGAC...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATTTCAATGGGTTGCAGTaGCCCACCACCATGCACCAG +
Preference number: 4 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHFNGLQ*PTTMHQ
Trigger: CTGGTGCATGGTGGTGGGGCACTGCAACCCATTGAA...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCCTGAAAGCCCATCTCTaGTTTTCCAAATTGGCCATT +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPLKAHL*FSKLAI
Trigger: AATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAG...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCACATCCTATTGCCCTTaGACCAACACCAACAAAATG +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPTSYCP*TNTNKM
Trigger: CATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGT...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGGACTTCGTCCAGCTCTaGCCCATCAGGCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWDFVQL*PIRPLL
Trigger: GAGGAGAGGCCTGATGGGGCAGAGCTGGACGAAGTC...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACTCCACAGATGAACACTaGAGAGTGCTTTTTCTACTG +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYSTDEH*RVLFLL
Trigger: CAGTAGAAAAAGCACTCTCCAGTGTTCATCTGTGGA...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTTCCACAGATGAACACTaGAGAGTGCTTTTTCTACTG +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSASTDEH*RVLFLL
Trigger: CAGTAGAAAAAGCACTCTCCAGTGTTCATCTGTGGA...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGTGGCATTTTCTCTGTTaGGACTGCAGGTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWWHFLC*DCRFSP
Trigger: GGGAGAAAACCTGCAGTCCCAACAGAGAAAATGCCA...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGTTTTCAAAGTTTCAATaGGTTGCAGTGCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: EATRDHCKLKDPSQELCGFSKFQ*VAVPHH
Trigger: GTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAA...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTTTTTCAAAGTTTCAATaGGTTGCAGTGCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGFSKFQ*VAVPHH
Trigger: GTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAA...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACATTCTCTCCACTGTTTaGGGGGTCTTGGTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHILSTV*GVLVLF
Trigger: AAAAAGCACCAAGACCCCCCAAACAGTGGAGAGAAT...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTTGTTCTTATTCATTCTaGGATATTGGAGGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSACSYSF*DIGGVV
Trigger: GACCACCCCTCCAATATCCCAGAATGAATAAGAACA...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCCTTGCTTTCAATGACTaGAGAGTTTTGAACTCTGGC +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPLAFND*RVLNSG
Trigger: GCCAGAGTTCAAAACTCTCCAGTCATTGAAAGCAAG...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTAGCTTTGGATCTATCTaGATAAGGAGGCTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGSFGSI*IRRLLN
Trigger: GTTGAGCAGCCTCCTTATCCAGATAGATCCAAAGCT...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCCATGGGAGTAGTCTATaGGAGTCAAGTACACTTAAG +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPHGSSL*ESSTLK
Trigger: CTTAAGTGTACTTGACTCCCATAGACTACTCCCATG...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACTCTGCTTTTCCAAATTaGCCATTCATGGAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYSAFPN*PFMERQ
Trigger: TTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGA...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTCCAGATCCTTTCTCTTaGGATAGTCTGCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGPDPFS*DSLQQL
Trigger: AAGCTGTTGCAGACTATCCCAAGAGAAAGGATCTGG...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCGAAAAGTCCCCATCATaGGGATCAGGTTTGGATAAA +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPEKSPS*GSGLDK
Trigger: TTTATCCAAACCTGATCCCCATGATGGGGACTTTTC...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATCCTCAAATATCTTCATaGCTCACTTTAGGACTTATG +
Preference number: 4 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHPQISS*LTLGLM
Trigger: CATAAGTCCTAAAGTGAGCCATGAAGATATTTGAGG...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS-3UTR TCA 90 bp GCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGGTAGGATGGCTGTCATaGACACGATCTGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: AEVWAQSLGSETEPNPTKVGWLS*TRSAAS
Trigger: ACTTGCTGCAGATCGTGTTCATGACAGCCATCCTAC...CTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR TCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACATCTTTCTTTTGACATaGCCACTGGGCATCATCTTT +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYIFLLT*PLGIIF
Trigger: AAAGATGATGCCCAGTGGTCATGTCAAAAGAAAGAT...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCATCTTTCTTTTGACATaGCCACTGGGCATCATCTTT +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPIFLLT*PLGIIF
Trigger: AAAGATGATGCCCAGTGGTCATGTCAAAAGAAAGAT...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGACGAGCAGAGCACCTGTaGGGCCTGGTCAGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGRAEHL*GLVSLY
Trigger: ATACAAGCTGACCAGGCCTCACAGGTGCTCTGCTCG...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp CCAAACATTGGTAGAAGAGTGCTTCAGGCTTGTGCCTCCACTGAATTTCCCCAGCTGCCCTGGGTGGTATaGCTTTGTCTACCAACACTG +
Preference number: 4 (lower is better)
Translates to: PNIGRRVLQACASTEFPQLPWVV*LCLPTL
Trigger: CAGTGTTGGTAGACAAAGTCATACCACCCAGGGCAG...CTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGGCGCCAGTCTCAGCCTaGAGAGACATGAGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKAPVSA*RDMSFG
Trigger: TCCAAAGCTCATGTCTCTTCAGGCTGAGACTGGCGC...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGCAAGGGTGGGAGACTTaGGACGGAGGAAAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKQGWET*DGGKAD
Trigger: ATCTGCCTTTCCTCCGTCTCAAGTCTCCCACCCTTG...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCGCAAAAGCTTTTCTATaGTTCACTTTGGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPAKAFL*FTLVLC
Trigger: GCAGAGAACCAAAGTGAATCATAGAAAAGCTTTTGC...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGGGAAGCAGGGACAAGTaGAGAGTAGCTCTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKGSRDK*RVALRE
Trigger: CTCCCTCAGAGCTACTCTTCACTTGTCCCTGCTTCC...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp TTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCCCTCTTTCACACCAGTaGGAGGAGGCCCATCCTTCT +
Preference number: 4 (lower is better)
Translates to: FGRRVWAQRLNQIQQRCLPLSHQ*EEAHPS
Trigger: AGAAGGATGGGCCTCCTCTCACTGGTGTGAAAGAGG...GAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR GCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTTTTCTACTGGATACCTaGTGTTCCTGCATTCTAGCA +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGFLLDT*CSCILA
Trigger: TGCTAGAATGCAGGAACAGCAGGTATCCAGTAGAAA...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACGGACATTCCTTCATGTaGAATTCTTCTTGTGGCATT +
Preference number: 4 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYGHSFM*NSSCGI
Trigger: AATGCCACAAGAAGAATTGCACATGAAGGAATGTCC...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp CCAAACATTGGTAGAAGAGTGCTTCAGGCTTGTGCCTCCACTGAATTTCCCCAGTACCGGGAGGTGGTGTaGTGTAATGATGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PNIGRRVLQACASTEFPQYREVV*CNDGEA
Trigger: AGCCTCACCATCATTACAGCACACCACCTCCCGGTA...CTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp CTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATACCGGGAGGTGGTGTaGTGTAATGATGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LRFGRRVWAQRLNQIQQRYREVV*CNDGEA
Trigger: AGCCTCACCATCATTACAGCACACCACCTCCCGGTA...TCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp CTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATCTTCAGGGGTTCTGTaGATCCCCATCTTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LRFGRRVWAQRLNQIQQRSSGVL*IPIFFR
Trigger: CCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGA...TCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR GCA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGTCGCTGCATGCAGGCTaGCCTGGGTGGTATGACTTT +
Preference number: 4 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKSLHAG*PGWYDF
Trigger: AAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGA...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGACATCCTATTGCCCTTaGACCAACACCAACAAAATG +
Preference number: 4 (lower is better)
Translates to: EATRDHCKLKDPSQELCGTSYCP*TNTNKM
Trigger: CATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGT...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCGGAGTTCAAAGGACATaGTGTGTCCTTTTCCATTTT +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPGVQRT*CVLFHF
Trigger: AAAATGGAAAAGGACACAGCATGTCCTTTGAACTCC...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGACCGTGTCCCCACACCTaGAGACAGTACCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGPCPHT*RQYQSL
Trigger: GAGAGACTGGTACTGTCTGCAGGTGTGGGGACACGG...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587139.5
CDS-3UTR GCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGACCAGAAGGCGGAGCTTaGAGTGAGCTGAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGPEGGA*SELRWH
Trigger: GTGCCATCTCAGCTCACTGCAAGCTCCGCCTTCTGG...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS-3UTR GCA 90 bp TTAGTTGACAAGTATGTGCTTAGCAGCCTAACAGCAGCAGCAGAACAGCTGGATCCGGGAGGTGGAGGTTaGGGTGAACTGAAATCGCAC +
Preference number: 4 (lower is better)
Translates to: LVDKYVLSSLTAAAEQLDPGGGG*GELKSH
Trigger: GTGCGATTTCAGTTCACCGCAACCTCCACCTCCCGG...ATCCAGCTGTTCTGCTGCTGCTGTTAGGCTGCTAAGCACATACTTGTCAACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592521.5
CDS-3UTR CCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACTTGATAGTAGGTCTGTaGTCTGGCTATGCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHLIVGL*SGYAQV
Trigger: TACTTGAGCATAGCCAGACCACAGACCTACTATCAA...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGTTGATAGTAGGTCTGTaGTCTGGCTATGCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: EATRDHCKLKDPSQELCGLIVGL*SGYAQV
Trigger: TACTTGAGCATAGCCAGACCACAGACCTACTATCAA...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GGGATAGCGCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCTCTGAAGCTGAATCCTaGACTGCAGACTTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GIALRFGRRVWAQRLNQISEAES*TADLGL
Trigger: AAGACCTAAGTCTGCAGTCCAGGATTCAGCTTCAGA...GATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGTCTGAAGCTGAATCCTaGACTGCAGACTTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWSEAES*TADLGL
Trigger: AAGACCTAAGTCTGCAGTCCAGGATTCAGCTTCAGA...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp TTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCGATAGCGCTGAGGTTTaGGCGCAGAGTTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: FGRRVWAQRLNQIQQRCLDSAEV*AQSLGS
Trigger: TGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATC...GAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGAGGCCCCAGCTTCTCTaGAGGGATAGCGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWRPQLL*RDSAEV
Trigger: AACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCT...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp TCTCTGTTGGGACTGCAGGTTTTCTCCCTGGAGATTCACAATTACATGTTGTGGAGGCCCCAGCTTCTCTaGAGGGATAGCGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLLGLQVFSLEIHNYMLWRPQLL*RDSAEV
Trigger: AACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCT...CCACAACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCCTCCCAAGGATTGGCTaGGTCTCACCCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPLPRIG*VSPSSP
Trigger: TGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAG...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGTGGTGGAACATACTCTaGCAAGTAGAGATGGTTCTT +
Preference number: 4 (lower is better)
Translates to: EATRDHCKLKDPSQELCGWWNIL*QVEMVL
Trigger: AAGAACCATCTCTACTTGCCAGAGTATGTTCCACCA...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCGAGAGTTTTGAACTCTaGCTAAACCAGGATCATCAT +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPESFEL*LNQDHH
Trigger: ATGATGATCCTGGTTTAGCCAGAGTTCAAAACTCTC...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTTCTGCTTTTCCAAATTaGCCATTCATGGAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGSAFPN*PFMERQ
Trigger: TTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGA...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTGAAAAGTCCCCATCATaGGGATCAGGTTTGGATAAA +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGEKSPS*GSGLDK
Trigger: TTTATCCAAACCTGATCCCCATGATGGGGACTTTTC...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGGTTGAGGCAGGAGAATaGTGTGAACCCAGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKVEAGE*CEPRRR
Trigger: CCGCCTTCTGGGTTCACACCATTCTCCTGCCTCAAC...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591619.5
3UTR CAA 72 bp TCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATaGGTAGAAGAGTGCTTCAGGCTTGTGCCTCCACTG +
Preference number: 4 (lower is better)
Translates to: SFWDIGGVVTQT*VEECFRLVPPL
Trigger: CAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp CCAAACATTGGTAGAAGAGTGCTTCAGGCTTGTGCCTCCACTGAATTTCCCCAGGTAGGATGGCTGTCATaGACACGATCTGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: PNIGRRVLQACASTEFPQVGWLS*TRSAAS
Trigger: ACTTGCTGCAGATCGTGTTCATGACAGCCATCCTAC...CTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp TCTGATTCTCCTCCAACTCTTCAGGGGTTCTGTGCATCCCCATCTTCTTCCGGGCCGACAATAACTGCATaGTTCTGGATGTGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: SDSPPTLQGFCASPSSSGPTITA*FWMCLR
Trigger: CCTAAGACACATCCAGAATCATGCAGTTATTGTCGG...CCCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR TCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTATCTTTCTTTTGACATaGCCACTGGGCATCATCTTT +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGIFLLT*PLGIIF
Trigger: AAAGATGATGCCCAGTGGTCATGTCAAAAGAAAGAT...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGATATCTTCCAGAATCTaGTTCTCCTCCAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: EATRDHCKLKDPSQELCGISSRI*FSSNSS
Trigger: TGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATAT...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCGAAAAATGTATTGGTTaGTATTCTGCTGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: KESATASISLSRLRPALPEKCIG*YSAESP
Trigger: TGGGCTTTCAGCAGAATATCAACCAATACATTTTTC...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATACAGGGTGGGCAATGGTaGGGCACTATCCGCAACGCC +
Preference number: 4 (lower is better)
Translates to: LVRQVPVKGETQLLCNEIQGGQW*GTIRNA
Trigger: GGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTG...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGGGAAGCAGGGACAAGTaGAGAGTAGCTCTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWGSRDK*RVALRE
Trigger: CTCCCTCAGAGCTACTCTTCACTTGTCCCTGCTTCC...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp TTTTTAGTTGACAAGTATGTGCTTAGCAGCCTAACAGCAGCAGCAGAACAGCTGGGTAGGAGAATCGCTTaGACCGGGAGGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: FLVDKYVLSSLTAAAEQLGRRIA*TGRWRL
Trigger: CAACCTCCACCTCCCGGTTCAAGCGATTCTCCTACC...CAGCTGTTCTGCTGCTGCTGTTAGGCTGCTAAGCACATACTTGTCAACTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592521.5
CDS-3UTR GCA 90 bp GCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGTTTCTCTGTTGGGACTaGAGGTTTTCTCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: AEVWAQSLGSETEPNPTKFLCWD*RFSPWR
Trigger: TCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGAAA...CTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTGGACATTCCTTCATGTaGAATTCTTCTTGTGGCATT +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGGHSFM*NSSCGI
Trigger: AATGCCACAAGAAGAATTGCACATGAAGGAATGTCC...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp CAAAGGAACGCAGCTCCTCACCAGCAACGGAACAAAGCTGGACAGAGAATGACTACCATGCACCAGAGATaGCCAAGAAAGCCGACAATA +
Preference number: 4 (lower is better)
Translates to: QRNAAPHQQRNKAGQRMTTMHQR*PRKPTI
Trigger: TATTGTCGGCTTTCTTGGGCATCTCTGGTGCATGGT...AGTCATTCTCTGTCCAGCTTTGTTCCGTTGCTGGTGAGGAGCTGCGTTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR GCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTTCAATGGGTTGCAGTaGCCCACCACCATGCACCAG +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWFNGLQ*PTTMHQ
Trigger: CTGGTGCATGGTGGTGGGGCACTGCAACCCATTGAA...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp TCTTCTGAGATCTGCTTTTTCAAAGTTTCAATGGGTTGCAGTGCCCCACCACCATTCAATGGGTTGCAGTaGCCCACCACCATGCACCAG +
Preference number: 4 (lower is better)
Translates to: SSEICFFKVSMGCSAPPPFNGLQ*PTTMHQ
Trigger: CTGGTGCATGGTGGTGGGGCACTGCAACCCATTGAA...TGGTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAAAGCAGATCTCAGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp CCAAACATTGGTAGAAGAGTGCTTCAGGCTTGTGCCTCCACTGAATTTCCCCAGAAAGTTTCAATGGGTTaGAGTGCCCCACCACCATGC +
Preference number: 4 (lower is better)
Translates to: PNIGRRVLQACASTEFPQKVSMG*SAPPPC
Trigger: GCATGGTGGTGGGGCACTGCAACCCATTGAAACTTT...CTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGTCTTCAGGGGTTCTGTaGATCCCCATCTTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKSSGVL*IPIFFR
Trigger: CCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGA...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTAAAGATGAGAGAGTCTaGCTTTCTGAAACTGCTTAT +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSAKDERV*LSETAY
Trigger: ATAAGCAGTTTCAGAAAGGCAGACTCTCTCATCTTT...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATGAAGCCCATCAGCTTTaGAGCAGCTTGCATCACTCT +
Preference number: 4 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHEAHQL*SSLHHS
Trigger: AGAGTGATGCAAGCTGCTGCAAAGCTGATGGGCTTC...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGATCGCTGCATGCAGGCTaGCCTGGGTGGTATGACTTT +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGSLHAG*PGWYDF
Trigger: AAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGA...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GGAAAGTACCATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTTGATAGTAGGTCTGTaGTCTGGCTATGCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: GKYHDSRPQLLWRDSAEVLIVGL*SGYAQV
Trigger: TACTTGAGCATAGCCAGACCACAGACCTACTATCAA...AACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATGGTACTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CCA 90 bp GTTAGTCTGATGGGCTTCCCTTTGTGGGTAACCCAACCTTTCTCTCTGGCTGCCTTTTCAAAGTTTCAATaGGTTGCAGTGCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: VSLMGFPLWVTQPFSLAAFSKFQ*VAVPHH
Trigger: GTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAA...GGCAGCCAGAGAGAAAGGTTGGGTTACCCACAAAGGGAAGCCCATCAGACTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CCA 90 bp CTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATTTGGGCGCAGAGTTTaGGCTCAGAGACTGAACCAA +
Preference number: 4 (lower is better)
Translates to: LRFGRRVWAQRLNQIQQRFGRRV*AQRLNQ
Trigger: TTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAA...TCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGAGATAGCGCTGAGGTTTaGGCGCAGAGTTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGDSAEV*AQSLGS
Trigger: TGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATC...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGGTAGAGATGGTTCTTTaGGGCCACGAGCAGAGCACC +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWVEMVL*GHEQST
Trigger: GGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GGGATAGCGCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCGAGTGCTTTTTCTACTaGATACCTGTGGGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: GIALRFGRRVWAQRLNQIECFFY*IPVGLV
Trigger: AACAAGACCCACAGGTATCCAGTAGAAAAAGCACTC...GATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586135.1
3UTR CAA 72 bp ATGGCTACTGAGACTGACTCACAATTGGCTCTCGTGTaGTTTGTGATGGCAGGGGCACCAACTCCAACTTCA +
Preference number: 4 (lower is better)
Translates to: MATETDSQLALV*FVMAGAPTPTS
Trigger: TGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGAGCCAATTGTGAGTCAGTCTCAGTAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTGGGCCAGCAGATGCTaGAGGCGCTCCTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWWASRC*RRSFSI
Trigger: AATTGAAAAGGAGCGCCTTCAGCATCTGCTGGCCCA...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp TATATCTTCCAGAATCTGATTCTCCTCCAACTCTTCAGGGGTTCTGTGCATCCCTGGGCCAGCAGATGCTaGAGGCGCTCCTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: YIFQNLILLQLFRGSVHPWASRC*RRSFSI
Trigger: AATTGAAAAGGAGCGCCTTCAGCATCTGCTGGCCCA...GGGATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR TCA 90 bp TTTTGCAGCAGCTGGTACCAGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCAGGTGGGCCAGCAGATGCTaGAGGCGCTCCTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: FCSSWYQLFLSMFSASFRWASRC*RRSFSI
Trigger: AATTGAAAAGGAGCGCCTTCAGCATCTGCTGGCCCA...CCTGAAGGAAGCACTAAACATGGAAAGGAACAACTGGTACCAGCTGCTGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR TCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCCTCTCGTGTTGTTTGTaGTGGCAGGGGCACCAACTC +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPLSCCL*WQGHQL
Trigger: GAGTTGGTGCCCCTGCCATCACAAACAACACGAGAG...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGGGCTTGTGCCTCCACTaGATTTCCCCAGGACTAATC +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWGLCLH*ISPGLI
Trigger: GATTAGTCCTGGGGAAATTCAGTGGAGGCACAAGCC...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGTCAAAACGAGGCCAGTaGGAAAAAGTAGGGAGACCC +
Preference number: 4 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKSKRGQ*EKVGRP
Trigger: GGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGA...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGACTGCCCTGGGTGGTATaGCTTTGTCTACCAACACTG +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGLPWVV*LCLPTL
Trigger: CAGTGTTGGTAGACAAAGTCATACCACCCAGGGCAG...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATCAGCCTGAAGAGACATaGGCTTTGGATCTATCTGGA +
Preference number: 4 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHQPEET*ALDLSG
Trigger: TCCAGATAGATCCAAAGCTCATGTCTCTTCAGGCTG...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTCTTTTTGATATGGGATaGAACCGATTTGGTTACTCT +
Preference number: 4 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGLFDMG*NRFGYS
Trigger: AGAGTAACCAAATCGGTTTCATCCCATATCAAAAAG...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCGTCCCTCTCTCCCCATaGCATTTGGGGTGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPVPLSP*HLGCSR
Trigger: TCTAGAGCACCCCAAATGTCATGGGGAGAGAGGGAC...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATTCTGTGGTCTGGCTATaGTCAAGTAGGAACCATCCA +
Preference number: 4 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHSVVWL*SSRNHP
Trigger: TGGATGGTTCCTACTTGAGCATAGCCAGACCACAGA...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp GCTTTTTCAAAGTTTCAATGGGTTGCAGTGCCCCACCACCATGCACCAGAGATGTCTGTGGTCTGGCTATaGTCAAGTAGGAACCATCCA +
Preference number: 4 (lower is better)
Translates to: AFSKFQWVAVPHHHAPEMSVVWL*SSRNHP
Trigger: TGGATGGTTCCTACTTGAGCATAGCCAGACCACAGA...CATCTCTGGTGCATGGTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGGGACATTCCTTCATGTaGAATTCTTCTTGTGGCATT +
Preference number: 4 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWGHSFM*NSSCGI
Trigger: AATGCCACAAGAAGAATTGCACATGAAGGAATGTCC...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp GGGATAGCGCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCAAAGCCGACAATAACTaGATGATTCTGGATGTGTCT +
Preference number: 4 (lower is better)
Translates to: GIALRFGRRVWAQRLNQIKADNN*MILDVS
Trigger: AGACACATCCAGAATCATGCAGTTATTGTCGGCTTT...GATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp AGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTAAAGTTTCAATGGGTTaGAGTGCCCCACCACCATGC +
Preference number: 4 (lower is better)
Translates to: RFGRRVWAQRLNQIQQRCKVSMG*SAPPPC
Trigger: GCATGGTGGTGGGGCACTGCAACCCATTGAAACTTT...ACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp AGCCAGCCATCACAGTTTGACTTCAATAAACTTGGTCCAGAGTCACTGCCATTCTACCGGGAGGTGGTGTaGTGTAATGATGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SQPSQFDFNKLGPESLPFYREVV*CNDGEA
Trigger: AGCCTCACCATCATTACAGCACACCACCTCCCGGTA...GAATGGCAGTGACTCTGGACCAAGTTTATTGAAGTCAAACTGTGATGGCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590617.5
CDS-3UTR GCA 90 bp TATATCTTCCAGAATCTGATTCTCCTCCAACTCTTCAGGGGTTCTGTGCATCCCTCTTCAGGGGTTCTGTaGATCCCCATCTTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: YIFQNLILLQLFRGSVHPSSGVL*IPIFFR
Trigger: CCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGA...GGGATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR GCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGATCTTCAGGGGTTCTGTaGATCCCCATCTTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGSSGVL*IPIFFR
Trigger: CCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGA...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCTCGCTGCATGCAGGCTaGCCTGGGTGGTATGACTTT +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPSLHAG*PGWYDF
Trigger: AAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGA...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp CTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGAAGTAGGTCTGTGGTCTaGCTATGCTCAAGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: LRFGRRVWAQRLNQIQQRSRSVV*LCSSRN
Trigger: GTTCCTACTTGAGCATAGCCAGACCACAGACCTACT...TCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp CCAAACATTGGTAGAAGAGTGCTTCAGGCTTGTGCCTCCACTGAATTTCCCCAGAGTAGGTCTGTGGTCTaGCTATGCTCAAGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: PNIGRRVLQACASTEFPQSRSVV*LCSSRN
Trigger: GTTCCTACTTGAGCATAGCCAGACCACAGACCTACT...CTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp TTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGTATCTAGATCATCTTTaGGATGATGAAGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: FSGGIALRFGRRVWAQRLYLDHL*DDEGLL
Trigger: CAGTAACCCTTCATCATCCCAAAGATGATCTAGATA...CAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGTATCTAGATCATCTTTaGGATGATGAAGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: EATRDHCKLKDPSQELCGYLDHL*DDEGLL
Trigger: CAGTAACCCTTCATCATCCCAAAGATGATCTAGATA...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp CCAAACATTGGTAGAAGAGTGCTTCAGGCTTGTGCCTCCACTGAATTTCCCCAGTGGCATTTTCTCTGTTaGGACTGCAGGTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PNIGRRVLQACASTEFPQWHFLC*DCRFSP
Trigger: GGGAGAAAACCTGCAGTCCCAACAGAGAAAATGCCA...CTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp TCCTCCAACTCTTCAGGGGTTCTGTGCATCCCCATCTTCTTCCGGGTTGATTTTTGGCATTTTCTCTGTTaGGACTGCAGGTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SSNSSGVLCIPIFFRVDFWHFLC*DCRFSP
Trigger: GGGAGAAAACCTGCAGTCCCAACAGAGAAAATGCCA...AAAATCAACCCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGAGTTGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATTGGCATTTTCTCTGTTaGGACTGCAGGTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHWHFLC*DCRFSP
Trigger: GGGAGAAAACCTGCAGTCCCAACAGAGAAAATGCCA...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp GCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGTTTTCAAAGTTTCAATaGGTTGCAGTGCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: AEVWAQSLGSETEPNPTKFSKFQ*VAVPHH
Trigger: GTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAA...CTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp TTCTCCTCCAACTCTTCAGGGGTTCTGTGCATCCCCATCTTCTTCCGGGTTGATGTCACTGTCCCTCTTTaGGGTCTACATGTATCTTTC +
Preference number: 4 (lower is better)
Translates to: FSSNSSGVLCIPIFFRVDVTVPL*GLHVSF
Trigger: GAAAGATACATGTAGACCCCAAAGAGGGACAGTGAC...ATCAACCCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGAGTTGGAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGTCTCATACCGGGAGGTaGTGTGCTGTAATGATGGTG +
Preference number: 4 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKSHTGR*CAVMMV
Trigger: CACCATCATTACAGCACACCACCTCCCGGTATGAGA...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp TGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCATTCTCATACCGGGAGGTaGTGTGCTGTAATGATGGTG +
Preference number: 4 (lower is better)
Translates to: WAQSLGSETEPNPTKMSHSHTGR*CAVMMV
Trigger: CACCATCATTACAGCACACCACCTCCCGGTATGAGA...ATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGGCAGGCTGCCCTGGGTaGTATGACTTTGTCTACCAA +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWAGCPG*YDFVYQ
Trigger: TTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGC...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTAAAGGCTTTTTGATATaGGATGAAACCGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSAKGFLI*DETDLV
Trigger: AACCAAATCGGTTTCATCCCATATCAAAAAGCCTTT...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGTGTCCAGTCTTGCTTTaGGAAGTGTCTAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKCPVLL*EVSRGW
Trigger: CCAGCCTCTAGACACTTCCCAAAGCAAGACTGGACA...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATTCTCCCCATGACATTTaGGGTGCTCTAGAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHSPHDI*GALEKS
Trigger: GGACTTTTCTAGAGCACCCCAAATGTCATGGGGAGA...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp TCTGATTCTCCTCCAACTCTTCAGGGGTTCTGTGCATCCCCATCTTCTTCCGGGTCTACTGGATACCTGTaGGTCTTGTTGGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: SDSPPTLQGFCASPSSSGSTGYL*VLLESK
Trigger: TTTGCTTTCCAACAAGACCCACAGGTATCCAGTAGA...CCCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR TCA 90 bp GCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGTCTCTATACTGTAGCTaGAGAGCTTCCCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: AEVWAQSLGSETEPNPTKSLYCS*RASLSL
Trigger: CAAAGAAAGGGAAGCTCTTCAGCTACAGTATAGAGA...CTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR TCA 90 bp CCAAACATTGGTAGAAGAGTGCTTCAGGCTTGTGCCTCCACTGAATTTCCCCAGATCCAGTTCCACAGATaGACACTGGAGAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PNIGRRVLQACASTEFPQIQFHR*TLESAF
Trigger: AAAAGCACTCTCCAGTGTTCATCTGTGGAACTGGAT...CTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp AGCCAGCCATCACAGTTTGACTTCAATAAACTTGGTCCAGAGTCACTGCCATTCGTAGGATGGCTGTCATaGACACGATCTGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: SQPSQFDFNKLGPESLPFVGWLS*TRSAAS
Trigger: ACTTGCTGCAGATCGTGTTCATGACAGCCATCCTAC...GAATGGCAGTGACTCTGGACCAAGTTTATTGAAGTCAAACTGTGATGGCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590617.5
CDS-3UTR TCA 90 bp TGCAGACTTAGGTCTTTGCTTGGTTTGATAGTAGGTCTGTGGTCTGGCTATGCTGTAGGATGGCTGTCATaGACACGATCTGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: CRLRSLLGLIVGLWSGYAVGWLS*TRSAAS
Trigger: ACTTGCTGCAGATCGTGTTCATGACAGCCATCCTAC...AGCATAGCCAGACCACAGACCTACTATCAAACCAAGCAAAGACCTAAGTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR TCA 90 bp AATGCTATAAGGGATTCTGAAGCTGAATCCTGGACTGCAGACTTAGGTCTTTGCTGGGCCAGCAGATGCTaGAGGCGCTCCTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: NAIRDSEAESWTADLGLCWASRC*RRSFSI
Trigger: AATTGAAAAGGAGCGCCTTCAGCATCTGCTGGCCCA...GCAAAGACCTAAGTCTGCAGTCCAGGATTCAGCTTCAGAATCCCTTATAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR TCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCTGGGCCAGCAGATGCTaGAGGCGCTCCTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPWASRC*RRSFSI
Trigger: AATTGAAAAGGAGCGCCTTCAGCATCTGCTGGCCCA...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGATCCAGTCGAGACTGGTaGAGCTGCTGCTGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGSSRDW*SCCCFR
Trigger: TCTAAAACAGCAGCAGCTTCACCAGTCTCGACTGGA...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGAAGACAGCAGACAGGATaGGGTCTGCACTGCATAACT +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGRQQTG*GLHCIT
Trigger: AGTTATGCAGTGCAGACCTCATCCTGTCTGCTGTCT...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp CCAAACATTGGTAGAAGAGTGCTTCAGGCTTGTGCCTCCACTGAATTTCCCCAGAGAAGATCTCTATTATaGACTTGGTGCCGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: PNIGRRVLQACASTEFPQRRSLL*TWCRKQ
Trigger: CTGCTTCCGGCACCAAGTTCATAATAGAGATCTTCT...CTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp TGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCATTTTTGGTCAAAGGTCTaGAGGCCGTATCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: WAQSLGSETEPNPTKMSHFWSKV*RPYQFS
Trigger: GGAGAACTGATACGGCCTTCAGACCTTTGACCAAAA...ATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR TCA 90 bp GTTAGTCTGATGGGCTTCCCTTTGTGGGTAACCCAACCTTTCTCTCTGGCTGCCAGAGAAGGATTCAGATaGTCAAACTACTCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: VSLMGFPLWVTQPFSLAAREGFR*SNYSEQ
Trigger: TTGCTCAGAGTAGTTTGATCATCTGAATCCTTCTCT...GGCAGCCAGAGAGAAAGGTTGGGTTACCCACAAAGGGAAGCCCATCAGACTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR GCA 90 bp AGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTACCATGCACCAGAGATaGCCAAGAAAGCCGACAATA +
Preference number: 4 (lower is better)
Translates to: RFGRRVWAQRLNQIQQRCTMHQR*PRKPTI
Trigger: TATTGTCGGCTTTCTTGGGCATCTCTGGTGCATGGT...ACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp AGGATGGCTGTCATGAACACGATCTGCAGCAAGTCTATGACCACAGCATTGACTACCATGCACCAGAGATaGCCAAGAAAGCCGACAATA +
Preference number: 4 (lower is better)
Translates to: RMAVMNTICSKSMTTALTTMHQR*PRKPTI
Trigger: TATTGTCGGCTTTCTTGGGCATCTCTGGTGCATGGT...AGTCAATGCTGTGGTCATAGACTTGCTGCAGATCGTGTTCATGACAGCCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGAGGCAGATTCCTTTGTaGCAGATCCTTTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKRQIPL*QILSLG
Trigger: CCCAAGAGAAAGGATCTGGCACAAAGGAATCTGCCT...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp CCAAACATTGGTAGAAGAGTGCTTCAGGCTTGTGCCTCCACTGAATTTCCCCAGTCTTTATTTCTCCCCTaGAGGAATTCGGTAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PNIGRRVLQACASTEFPQSLFLP*RNSVVS
Trigger: GCTCACTACCGAATTCCTGCAGGGGAGAAATAAAGA...CTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587139.5
CDS-3UTR CCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATTCTGAAGCTGAATCCTaGACTGCAGACTTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHSEAES*TADLGL
Trigger: AAGACCTAAGTCTGCAGTCCAGGATTCAGCTTCAGA...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACCACAATTACATGTTGTaGTCTCTGATGGTATCTTAT +
Preference number: 4 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHHNYML*SLMVSY
Trigger: ATAAGATACCATCAGAGACCACAACATGTAATTGTG...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp TTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCTGGCATTTTCTCTGTTaGGACTGCAGGTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FGRRVWAQRLNQIQQRCLWHFLC*DCRFSP
Trigger: GGGAGAAAACCTGCAGTCCCAACAGAGAAAATGCCA...GAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATTTTTCAAAGTTTCAATaGGTTGCAGTGCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHFSKFQ*VAVPHH
Trigger: GTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAA...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp CTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGAATTCTCTCCACTGTTTaGGGGGTCTTGGTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LRFGRRVWAQRLNQIQQRILSTV*GVLVLF
Trigger: AAAAAGCACCAAGACCCCCCAAACAGTGGAGAGAAT...TCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATATTCTCTCCACTGTTTaGGGGGTCTTGGTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHILSTV*GVLVLF
Trigger: AAAAAGCACCAAGACCCCCCAAACAGTGGAGAGAAT...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp CCAAACATTGGTAGAAGAGTGCTTCAGGCTTGTGCCTCCACTGAATTTCCCCAGGTCACTGTCCCTCTTTaGGGTCTACATGTATCTTTC +
Preference number: 4 (lower is better)
Translates to: PNIGRRVLQACASTEFPQVTVPL*GLHVSF
Trigger: GAAAGATACATGTAGACCCCAAAGAGGGACAGTGAC...CTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGATCTCATACCGGGAGGTaGTGTGCTGTAATGATGGTG +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGSHTGR*CAVMMV
Trigger: CACCATCATTACAGCACACCACCTCCCGGTATGAGA...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp TGCAGACTTAGGTCTTTGCTTGGTTTGATAGTAGGTCTGTGGTCTGGCTATGCTTCTCATACCGGGAGGTaGTGTGCTGTAATGATGGTG +
Preference number: 4 (lower is better)
Translates to: CRLRSLLGLIVGLWSGYASHTGR*CAVMMV
Trigger: CACCATCATTACAGCACACCACCTCCCGGTATGAGA...AGCATAGCCAGACCACAGACCTACTATCAAACCAAGCAAAGACCTAAGTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTTTGGGCGCAGAGTTTaGGCTCAGAGACTGAACCAA +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWFGRRV*AQRLNQ
Trigger: TTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAA...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCGAGACCCTGCTTGGGTaGTGGAACATACTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPETLLG*WNILWQ
Trigger: TTGCCAGAGTATGTTCCACCACCCAAGCAGGGTCTC...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACAAAGGCTTTTTGATATaGGATGAAACCGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHKGFLI*DETDLV
Trigger: AACCAAATCGGTTTCATCCCATATCAAAAAGCCTTT...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGAGAAGTGTCTAGAGGCTaGACGAGCAAATCCCAACCA +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGEVSRG*TSKSQP
Trigger: TGGTTGGGATTTGCTCGTCCAGCCTCTAGACACTTC...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp TTAGTTGACAAGTATGTGCTTAGCAGCCTAACAGCAGCAGCAGAACAGCTGGATAATACGAAAATTAGCTaGGCCTGGTGGTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LVDKYVLSSLTAAAEQLDNTKIS*AWWWVP
Trigger: AGGCACCCACCACCAGGCCCAGCTAATTTTCGTATT...ATCCAGCTGTTCTGCTGCTGCTGTTAGGCTGCTAAGCACATACTTGTCAACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592521.5
CDS-3UTR CCA 90 bp TCCTTTTTAGTTGACAAGTATGTGCTTAGCAGCCTAACAGCAGCAGCAGAACAGCAGCAGCAGAACAGCTaGATGGCCTTATCAGGCACA +
Preference number: 4 (lower is better)
Translates to: SFLVDKYVLSSLTAAAEQQQQNS*MALSGT
Trigger: TGTGCCTGATAAGGCCATCCAGCTGTTCTGCTGCTG...CTGTTCTGCTGCTGCTGTTAGGCTGCTAAGCACATACTTGTCAACTAAAAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592521.5
CDS-3UTR TCA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGCCGACAATAACTGCATaGTTCTGGATGTGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKPTITA*FWMCLR
Trigger: CCTAAGACACATCCAGAATCATGCAGTTATTGTCGG...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp CATGATTTTGCAGCAGCTGGTACCAGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCCAGTCGAGACTGGTaGAGCTGCTGCTGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: HDFAAAGTSCSFPCLVLPSSRDW*SCCCFR
Trigger: TCTAAAACAGCAGCAGCTTCACCAGTCTCGACTGGA...AGGAAGCACTAAACATGGAAAGGAACAACTGGTACCAGCTGCTGCAAAATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR TCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCAGACAGCAGACAGGATaGGGTCTGCACTGCATAACT +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPRQQTG*GLHCIT
Trigger: AGTTATGCAGTGCAGACCTCATCCTGTCTGCTGTCT...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGATGACTGGAGAGTTTTaGACTCTGGCTAAACCAGGA +
Preference number: 4 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKMTGEF*TLAKPG
Trigger: TCCTGGTTTAGCCAGAGTTCAAAACTCTCCAGTCAT...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp CCAAACATTGGTAGAAGAGTGCTTCAGGCTTGTGCCTCCACTGAATTTCCCCAGTGGTTGATATTCTGCTaGAAGCCCATCTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PNIGRRVLQACASTEFPQWLIFC*KPISAF
Trigger: AAAAGCAGAGATGGGCTTTCAGCAGAATATCAACCA...CTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGAGTCTGCAACAGCTTTaGGGCTCTGTAACAACCTTT +
Preference number: 4 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKSLQQL*GSVTTF
Trigger: AAAGGTTGTTACAGAGCCTCAAAGCTGTTGCAGACT...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGAGAAGATCTCTATTATaGACTTGGTGCCGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKRRSLL*TWCRKQ
Trigger: CTGCTTCCGGCACCAAGTTCATAATAGAGATCTTCT...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp GTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTGGTCTAACAAGCTTCTaGGTAATGCTGATGTTGCTG +
Preference number: 4 (lower is better)
Translates to: VWAQSLGSETEPNPTKMSGLTSF*VMLMLL
Trigger: CAGCAACATCAGCATTACTCAGAAGCTTGTTAGACC...AGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR TCA 90 bp TCTCTGTTGGGACTGCAGGTTTTCTCCCTGGAGATTCACAATTACATGTTGTGGGCGCCTGGATGGACTTaGTACTTCTTGAAGATTGAC +
Preference number: 4 (lower is better)
Translates to: SLLGLQVFSLEIHNYMLWAPGWT*YFLKID
Trigger: GTCAATCTTCAAGAAGTATCAAGTCCATCCAGGCGC...CCACAACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592611.5
CDS-3UTR GCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGAACCATGCACCAGAGATaGCCAAGAAAGCCGACAATA +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGTMHQR*PRKPTI
Trigger: TATTGTCGGCTTTCTTGGGCATCTCTGGTGCATGGT...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp ATTTTCTCTGTTGGGACTGCAGGTTTTCTCCCTGGAGATTCACAATTACATGTTTTCAATGGGTTGCAGTaGCCCACCACCATGCACCAG +
Preference number: 4 (lower is better)
Translates to: IFSVGTAGFLPGDSQLHVFNGLQ*PTTMHQ
Trigger: CTGGTGCATGGTGGTGGGGCACTGCAACCCATTGAA...AACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp CATGATTTTGCAGCAGCTGGTACCAGTTGTTCCTTTCCATGTTTAGTGCTTCCTAAAGTTTCAATGGGTTaGAGTGCCCCACCACCATGC +
Preference number: 4 (lower is better)
Translates to: HDFAAAGTSCSFPCLVLPKVSMG*SAPPPC
Trigger: GCATGGTGGTGGGGCACTGCAACCCATTGAAACTTT...AGGAAGCACTAAACATGGAAAGGAACAACTGGTACCAGCTGCTGCAAAATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR GCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGAAAGTTTCAATGGGTTaGAGTGCCCCACCACCATGC +
Preference number: 4 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVKVSMG*SAPPPC
Trigger: GCATGGTGGTGGGGCACTGCAACCCATTGAAACTTT...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGACATTGGTAGAAGAGTaGTTCAGGCTTGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWTLVEE*FRLVPP
Trigger: TGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGT...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGAAGCTTTGCAGCAGCTTaGATCACTCTCTCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGSFAAA*ITLSLV
Trigger: CACTAGAGAGAGAGTGATGCAAGCTGCTGCAAAGCT...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGGAAGCCCATCAGCTTTaGAGCAGCTTGCATCACTCT +
Preference number: 4 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVEAHQL*SSLHHS
Trigger: AGAGTGATGCAAGCTGCTGCAAAGCTGATGGGCTTC...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCAAAGTAGGGAGACCCTaGTTGGGTGGTGGAACATAC +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPKVGRP*LGGGTY
Trigger: GTATGTTCCACCACCCAAGCAGGGTCTCCCTACTTT...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATCTGAAAGCCCATCTCTaGTTTTCCAAATTGGCCATT +
Preference number: 4 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHLKAHL*FSKLAI
Trigger: AATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAG...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGGAGTGCTTTTTCTACTaGATACCTGCTGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKECFFY*IPAVPA
Trigger: TGCAGGAACAGCAGGTATCCAGTAGAAAAAGCACTC...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp ATGGCTGTCATGAACACGATCTGCAGCAAGTCTATGACCACAGCATTGACTAGGGAGTGCTTTTTCTACTaGATACCTGCTGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: MAVMNTICSKSMTTALTRECFFY*IPAVPA
Trigger: TGCAGGAACAGCAGGTATCCAGTAGAAAAAGCACTC...CCTAGTCAATGCTGTGGTCATAGACTTGCTGCAGATCGTGTTCATGACAGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp TCCTCACCAGCAACGGAACAAAGCTGGACAGAGAATGACTTTGACGAGTTGAGATCTGAAGCTGAATCCTaGACTGCAGACTTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SSPATEQSWTENDFDELRSEAES*TADLGL
Trigger: AAGACCTAAGTCTGCAGTCCAGGATTCAGCTTCAGA...TCTCAACTCGTCAAAGTCATTCTCTGTCCAGCTTTGTTCCGTTGCTGGTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CCA 90 bp ATGGCTGTCATGAACACGATCTGCAGCAAGTCTATGACCACAGCATTGACTAGGTTTTCAAAGTTTCAATaGGTTGCAGTGCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: MAVMNTICSKSMTTALTRFSKFQ*VAVPHH
Trigger: GTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAA...CCTAGTCAATGCTGTGGTCATAGACTTGCTGCAGATCGTGTTCATGACAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp TTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCTTTTCAAAGTTTCAATaGGTTGCAGTGCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: FGRRVWAQRLNQIQQRCLFSKFQ*VAVPHH
Trigger: GTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAA...GAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp AGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTATTCTCTCCACTGTTTaGGGGGTCTTGGTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: RFGRRVWAQRLNQIQQRCILSTV*GVLVLF
Trigger: AAAAAGCACCAAGACCCCCCAAACAGTGGAGAGAAT...ACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp GTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTATTCTCTCCACTGTTTaGGGGGTCTTGGTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: VWAQSLGSETEPNPTKMSILSTV*GVLVLF
Trigger: AAAAAGCACCAAGACCCCCCAAACAGTGGAGAGAAT...AGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp ATATATCTTCCAGAATCTGATTCTCCTCCAACTCTTCAGGGGTTCTGTGCATCCTTTGGGCGCAGAGTTTaGGCTCAGAGACTGAACCAA +
Preference number: 4 (lower is better)
Translates to: IYLPESDSPPTLQGFCASFGRRV*AQRLNQ
Trigger: TTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAA...GGATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CCA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGAGGCTGAATATGCAATaGTTTCCACCACGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKRLNMQ*FPPRRK
Trigger: CTTTCTGCGTGGTGGAAACCATTGCATATTCAGCCT...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGACCCTGCTTGGGTGGTaGAACATACTCTGGCAAGTA +
Preference number: 4 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVTLLGW*NILWQV
Trigger: TACTTGCCAGAGTATGTTCCACCACCCAAGCAGGGT...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGCCAGATCCTTTCTCTTaGGATAGTCTGCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKPDPFS*DSLQQL
Trigger: AAGCTGTTGCAGACTATCCCAAGAGAAAGGATCTGG...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCTGTCCAGTCTTGCTTTaGGAAGTGTCTAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPCPVLL*EVSRGW
Trigger: CCAGCCTCTAGACACTTCCCAAAGCAAGACTGGACA...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp TCTGATTCTCCTCCAACTCTTCAGGGGTTCTGTGCATCCCCATCTTCTTCCGGGAATGTAATACATTATTaGACTCCTTTGCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SDSPPTLQGFCASPSSSGNVIHY*TPLLPP
Trigger: GGGAGGAAGCAAAGGAGTCCAATAATGTATTACATT...CCCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR CCA 90 bp TCCTCACCAGCAACGGAACAAAGCTGGACAGAGAATGACTTTGACGAGTTGAGAAAGAATGTTGAATATTaGCCCCCACTCTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SSPATEQSWTENDFDELRKNVEY*PPLSSG
Trigger: GCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTT...TCTCAACTCGTCAAAGTCATTCTCTGTCCAGCTTTGTTCCGTTGCTGGTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CCA 90 bp TGCAGACTTAGGTCTTTGCTTGGTTTGATAGTAGGTCTGTGGTCTGGCTATGCTCTCACCCTACTTTCATaGACACTGTGGCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: CRLRSLLGLIVGLWSGYALTLLS*TLWPHH
Trigger: ATGATGAGGCCACAGTGTCCATGAAAGTAGGGTGAG...AGCATAGCCAGACCACAGACCTACTATCAAACCAAGCAAAGACCTAAGTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592611.5
CDS-3UTR CCA 90 bp TTTTTAGTTGACAAGTATGTGCTTAGCAGCCTAACAGCAGCAGCAGAACAGCTGAGCAGAACAGCTGGATaGCCTTATCAGGCACAAAGG +
Preference number: 4 (lower is better)
Translates to: FLVDKYVLSSLTAAAEQLSRTAG*PYQAQR
Trigger: CCTTTGTGCCTGATAAGGCCATCCAGCTGTTCTGCT...CAGCTGTTCTGCTGCTGCTGTTAGGCTGCTAAGCACATACTTGTCAACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592521.5
CDS-3UTR TCA 90 bp TGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCATTCTCTATACTGTAGCTaGAGAGCTTCCCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: WAQSLGSETEPNPTKMSHSLYCS*RASLSL
Trigger: CAAAGAAAGGGAAGCTCTTCAGCTACAGTATAGAGA...ATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR TCA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGTCTCTATACTGTAGCTaGAGAGCTTCCCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKSLYCS*RASLSL
Trigger: CAAAGAAAGGGAAGCTCTTCAGCTACAGTATAGAGA...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp TTTTGCAGCAGCTGGTACCAGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCAGGATCCAGTTCCACAGATaGACACTGGAGAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: FCSSWYQLFLSMFSASFRIQFHR*TLESAF
Trigger: AAAAGCACTCTCCAGTGTTCATCTGTGGAACTGGAT...CCTGAAGGAAGCACTAAACATGGAAAGGAACAACTGGTACCAGCTGCTGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR TCA 90 bp AGCCAGCCATCACAGTTTGACTTCAATAAACTTGGTCCAGAGTCACTGCCATTCATCCAGTTCCACAGATaGACACTGGAGAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SQPSQFDFNKLGPESLPFIQFHR*TLESAF
Trigger: AAAAGCACTCTCCAGTGTTCATCTGTGGAACTGGAT...GAATGGCAGTGACTCTGGACCAAGTTTATTGAAGTCAAACTGTGATGGCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590617.5
CDS-3UTR TCA 90 bp TATATCTTCCAGAATCTGATTCTCCTCCAACTCTTCAGGGGTTCTGTGCATCCCCCGACAATAACTGCATaGTTCTGGATGTGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: YIFQNLILLQLFRGSVHPPTITA*FWMCLR
Trigger: CCTAAGACACATCCAGAATCATGCAGTTATTGTCGG...GGGATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR TCA 90 bp GTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTTCTTTCATATGCGAATaGAACCCAACTGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: VWAQSLGSETEPNPTKMSSFICE*NPTVFL
Trigger: GAGGAAGACAGTTGGGTTTCATTCGCATATGAAAGA...AGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR TCA 90 bp CTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGAATCTTTCTTTTGACATaGCCACTGGGCATCATCTTT +
Preference number: 4 (lower is better)
Translates to: LRFGRRVWAQRLNQIQQRIFLLT*PLGIIF
Trigger: AAAGATGATGCCCAGTGGTCATGTCAAAAGAAAGAT...TCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR TCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATTTGATTTTAGAGGACTaGGTCGGAAAGTACCATGAT +
Preference number: 4 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHLILED*VGKYHD
Trigger: ATCATGGTACTTTCCGACTCAGTCCTCTAAAATCAA...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp CTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATTGATTTTAGAGGACTaGGTCGGAAAGTACCATGAT +
Preference number: 4 (lower is better)
Translates to: LRFGRRVWAQRLNQIQQRLILED*VGKYHD
Trigger: ATCATGGTACTTTCCGACTCAGTCCTCTAAAATCAA...TCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR TCA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGTTTGTCTACCAACACTaGCTAAGTCTTACTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKFVYQH*LSLTPS
Trigger: ACTGGGAGTAAGACTTAGTCAGTGTTGGTAGACAAA...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCCAGCCTGAAGAGACATaGGCTTTGGATCTATCTGGA +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPQPEET*ALDLSG
Trigger: TCCAGATAGATCCAAAGCTCATGTCTCTTCAGGCTG...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp TCTTCTGAGATCTGCTTTTTCAAAGTTTCAATGGGTTGCAGTGCCCCACCACCAATACTTCTTGAAGATTaGCATGATTCCAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SSEICFFKVSMGCSAPPPILLED*HDSRPQ
Trigger: CTGGGGCCTGGAATCATGTCAATCTTCAAGAAGTAT...TGGTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAAAGCAGATCTCAGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592611.5
CDS-3UTR GCA 90 bp GATTTTGCAGCAGCTGGTACCAGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCATCTGTGGTCTGGCTATaGTCAAGTAGGAACCATCCA +
Preference number: 4 (lower is better)
Translates to: DFAAAGTSCSFPCLVLPSSVVWL*SSRNHP
Trigger: TGGATGGTTCCTACTTGAGCATAGCCAGACCACAGA...TGAAGGAAGCACTAAACATGGAAAGGAACAACTGGTACCAGCTGCTGCAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR GCA 90 bp CTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGAGGACATTCCTTCATGTaGAATTCTTCTTGTGGCATT +
Preference number: 4 (lower is better)
Translates to: LRFGRRVWAQRLNQIQQRGHSFM*NSSCGI
Trigger: AATGCCACAAGAAGAATTGCACATGAAGGAATGTCC...TCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp TATATCTTCCAGAATCTGATTCTCCTCCAACTCTTCAGGGGTTCTGTGCATCCCGTCATGAACACGATCTaGAGCAAGTCTATGACCACA +
Preference number: 4 (lower is better)
Translates to: YIFQNLILLQLFRGSVHPVMNTI*SKSMTT
Trigger: TGTGGTCATAGACTTGCTGCAGATCGTGTTCATGAC...GGGATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR GCA 90 bp TCTCTGTTGGGACTGCAGGTTTTCTCCCTGGAGATTCACAATTACATGTTGTGGGTCATGAACACGATCTaGAGCAAGTCTATGACCACA +
Preference number: 4 (lower is better)
Translates to: SLLGLQVFSLEIHNYMLWVMNTI*SKSMTT
Trigger: TGTGGTCATAGACTTGCTGCAGATCGTGTTCATGAC...CCACAACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp CTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGAAAAGCCGACAATAACTaGATGATTCTGGATGTGTCT +
Preference number: 4 (lower is better)
Translates to: LRFGRRVWAQRLNQIQQRKADNN*MILDVS
Trigger: AGACACATCCAGAATCATGCAGTTATTGTCGGCTTT...TCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp TCAGAGACTGAACCAAATCCAACAAAGATGTCTCATACCTTAATAGGTTCCTTCTTCAATGGGTTGCAGTaGCCCACCACCATGCACCAG +
Preference number: 4 (lower is better)
Translates to: SETEPNPTKMSHTLIGSFFNGLQ*PTTMHQ
Trigger: CTGGTGCATGGTGGTGGGGCACTGCAACCCATTGAA...GAAGGAACCTATTAAGGTATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR GCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCGCATGTGTCCAGTCTTaGTTTGGGAAGTGTCTAGAG +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPACVQS*FGKCLE
Trigger: CTCTAGACACTTCCCAAAGCAAGACTGGACACATGC...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGGCATGTGTCCAGTCTTaGTTTGGGAAGTGTCTAGAG +
Preference number: 4 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVACVQS*FGKCLE
Trigger: CTCTAGACACTTCCCAAAGCAAGACTGGACACATGC...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGGAGTGCTTTTTCTACTaGATACCTGCTGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWECFFY*IPAVPA
Trigger: TGCAGGAACAGCAGGTATCCAGTAGAAAAAGCACTC...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp TTCTCTGTATTTCCTGAATCTGAATGTTGGCCTGCCTTGCTAGATTGGGGAAGTAGTAGGTCTGTGGTCTaGCTATGCTCAAGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: FSVFPESECWPALLDWGSSRSVV*LCSSRN
Trigger: GTTCCTACTTGAGCATAGCCAGACCACAGACCTACT...ACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAGATTCAGGAAATACAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CCA 90 bp AGCCAGCCATCACAGTTTGACTTCAATAAACTTGGTCCAGAGTCACTGCCATTCTCTGAAGCTGAATCCTaGACTGCAGACTTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SQPSQFDFNKLGPESLPFSEAES*TADLGL
Trigger: AAGACCTAAGTCTGCAGTCCAGGATTCAGCTTCAGA...GAATGGCAGTGACTCTGGACCAAGTTTATTGAAGTCAAACTGTGATGGCTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590617.5
CDS-3UTR CCA 90 bp AACTTGGTTCTTGGAAACTCTAAAAAGCAGAGCACCTCTCCTCCTCCAAAGGAATGGCATTTTCTCTGTTaGGACTGCAGGTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: NLVLGNSKKQSTSPPPKEWHFLC*DCRFSP
Trigger: GGGAGAAAACCTGCAGTCCCAACAGAGAAAATGCCA...TTCCTTTGGAGGAGGAGAGGTGCTCTGCTTTTTAGAGTTTCCAAGAACCAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CCA 90 bp AGCCAGCCATCACAGTTTGACTTCAATAAACTTGGTCCAGAGTCACTGCCATTCGTCACTGTCCCTCTTTaGGGTCTACATGTATCTTTC +
Preference number: 4 (lower is better)
Translates to: SQPSQFDFNKLGPESLPFVTVPL*GLHVSF
Trigger: GAAAGATACATGTAGACCCCAAAGAGGGACAGTGAC...GAATGGCAGTGACTCTGGACCAAGTTTATTGAAGTCAAACTGTGATGGCTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590617.5
CDS-3UTR CCA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTCTCCCAAGGATTGGCTaGGTCTCACCCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSILPRIG*VSPSSP
Trigger: TGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAG...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGCTTGCTTTCAATGACTaGAGAGTTTTGAACTCTGGC +
Preference number: 4 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKLAFND*RVLNSG
Trigger: GCCAGAGTTCAAAACTCTCCAGTCATTGAAAGCAAG...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATAAGAGACATGAGCTTTaGATCTATCTGGATAAGGAG +
Preference number: 4 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHKRHEL*IYLDKE
Trigger: CTCCTTATCCAGATAGATCCAAAGCTCATGTCTCTT...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGAGGGATGAAACCGATTTaGTTACTCTCAGAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGGMKPI*LLSEVN
Trigger: GTTCACCTCTGAGAGTAACCAAATCGGTTTCATCCC...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGCTGCATCAAGAACTGTaGGCCTTACTTAGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVLHQEL*ALLREF
Trigger: GAACTCCCTAAGTAAGGCCCACAGTTCTTGATGCAG...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCCTGCATCAAGAACTGTaGGCCTTACTTAGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPLHQEL*ALLREF
Trigger: GAACTCCCTAAGTAAGGCCCACAGTTCTTGATGCAG...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp GCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGTCCAGTTTGAGTTCTTaGGGTTTAGTAAGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: AEVWAQSLGSETEPNPTKSSLSS*GLVSCF
Trigger: AAAACAGCTTACTAAACCCCAAGAACTCAAACTGGA...CTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CCA 90 bp GATTTTGCAGCAGCTGGTACCAGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCACCTGAATCTGAATGTTaGCCTGCCTTGCTAGATTGG +
Preference number: 4 (lower is better)
Translates to: DFAAAGTSCSFPCLVLPSPESEC*PALLDW
Trigger: CCAATCTAGCAAGGCAGGCCAACATTCAGATTCAGG...TGAAGGAAGCACTAAACATGGAAAGGAACAACTGGTACCAGCTGCTGCAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR TCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTCTCTATACTGTAGCTaGAGAGCTTCCCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWSLYCS*RASLSL
Trigger: CAAAGAAAGGGAAGCTCTTCAGCTACAGTATAGAGA...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGATCCAGTTCCACAGATaGACACTGGAGAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVIQFHR*TLESAF
Trigger: AAAAGCACTCTCCAGTGTTCATCTGTGGAACTGGAT...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp GATTTTGCAGCAGCTGGTACCAGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCACCGACAATAACTGCATaGTTCTGGATGTGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: DFAAAGTSCSFPCLVLPSPTITA*FWMCLR
Trigger: CCTAAGACACATCCAGAATCATGCAGTTATTGTCGG...TGAAGGAAGCACTAAACATGGAAAGGAACAACTGGTACCAGCTGCTGCAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR TCA 90 bp AAATATATCTTCCAGAATCTGATTCTCCTCCAACTCTTCAGGGGTTCTGTGCATTCCAGTCGAGACTGGTaGAGCTGCTGCTGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: KYIFQNLILLQLFRGSVHSSRDW*SCCCFR
Trigger: TCTAAAACAGCAGCAGCTTCACCAGTCTCGACTGGA...ATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR TCA 90 bp TGCTTTTTAATAGATGATGATGTTCCAAGCAGCCAGCCATCACAGTTTGACTTCTCCAGTCGAGACTGGTaGAGCTGCTGCTGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: CFLIDDDVPSSQPSQFDFSSRDW*SCCCFR
Trigger: TCTAAAACAGCAGCAGCTTCACCAGTCTCGACTGGA...GAAGTCAAACTGTGATGGCTGGCTGCTTGGAACATCATCATCTATTAAAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR TCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGATCTTTCATATGCGAATaGAACCCAACTGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGSFICE*NPTVFL
Trigger: GAGGAAGACAGTTGGGTTTCATTCGCATATGAAAGA...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGTTGATTTTAGAGGACTaGGTCGGAAAGTACCATGAT +
Preference number: 4 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKLILED*VGKYHD
Trigger: ATCATGGTACTTTCCGACTCAGTCCTCTAAAATCAA...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGATATCTTCCAGAATCTaGTTCTCCTCCAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKISSRI*FSSNSS
Trigger: TGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATAT...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGGCAAAAGCTTTTCTATaGTTCACTTTGGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKAKAFL*FTLVLC
Trigger: GCAGAGAACCAAAGTGAATCATAGAAAAGCTTTTGC...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp GTATTTCCTGAATCTGAATGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTCTTTACATTTTGGCATaGTTTTGCAGCAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: VFPESECWPALLDWGSSPLYILA*FCSSWY
Trigger: GTACCAGCTGCTGCAAAATCATGCCAAAATGTAAAG...AGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAGATTCAGGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR TCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGATGTCATGTCACCTTCTaGTTGAAGCTTTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGCHVTF*LKLSLP
Trigger: AGGAAGTGAAAGCTTCAATCAGAAGGTGACATGACA...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS-3UTR TCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGGCGCCTGGATGGACTTaGTACTTCTTGAAGATTGAA +
Preference number: 4 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVAPGWT*YFLKIE
Trigger: TTCAATCTTCAAGAAGTATCAAGTCCATCCAGGCGC...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS-3UTR GCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGATTTCTACTGGATACCTaGTGTTCCTGCATTCTAGCA +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGFLLDT*CSCILA
Trigger: TGCTAGAATGCAGGAACAGCAGGTATCCAGTAGAAA...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp TGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCATAAAGCCGACAATAACTaGATGATTCTGGATGTGTCT +
Preference number: 4 (lower is better)
Translates to: WAQSLGSETEPNPTKMSHKADNN*MILDVS
Trigger: AGACACATCCAGAATCATGCAGTTATTGTCGGCTTT...ATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp AGTCTGGTGGTGAGAAAATCTCTCAGCATTTGCTTGTCTGTAAAGGATTTTATTTTCAATGGGTTGCAGTaGCCCACCACCATGCACCAG +
Preference number: 4 (lower is better)
Translates to: SLVVRKSLSICLSVKDFIFNGLQ*PTTMHQ
Trigger: CTGGTGCATGGTGGTGGGGCACTGCAACCCATTGAA...AATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTCTCACCACCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR GCA 90 bp TTCTCCTCCAACTCTTCAGGGGTTCTGTGCATCCCCATCTTCTTCCGGGTTGATAACATACTTACGGTATaGGTATCAATCATCTCTAAG +
Preference number: 4 (lower is better)
Translates to: FSSNSSGVLCIPIFFRVDNILTV*VSIISK
Trigger: CTTAGAGATGATTGATACGCATACCGTAAGTATGTT...ATCAACCCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGAGTTGGAGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR GCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGCCTCCCGCTACTATCTaGCTCTTTCCTGCTTTATTT +
Preference number: 4 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVPPATI*LFPALF
Trigger: AAATAAAGCAGGAAAGAGGCAGATAGTAGCGGGAGG...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS-3UTR GCA 90 bp TTAGTTGACAAGTATGTGCTTAGCAGCCTAACAGCAGCAGCAGAACAGCTGGATAGAAATGGCAGCACATaGAGATTTACTCCCTGTTAC +
Preference number: 4 (lower is better)
Translates to: LVDKYVLSSLTAAAEQLDRNGST*RFTPCY
Trigger: GTAACAGGGAGTAAATCTGCATGTGCTGCCATTTCT...ATCCAGCTGTTCTGCTGCTGCTGTTAGGCTGCTAAGCACATACTTGTCAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592521.5
CDS-3UTR CCA 90 bp AGCCAGCCATCACAGTTTGACTTCAATAAACTTGGTCCAGAGTCACTGCCATTCTCCACAGATGAACACTaGAGAGTGCTTTTTCTACTG +
Preference number: 4 (lower is better)
Translates to: SQPSQFDFNKLGPESLPFSTDEH*RVLFLL
Trigger: CAGTAGAAAAAGCACTCTCCAGTGTTCATCTGTGGA...GAATGGCAGTGACTCTGGACCAAGTTTATTGAAGTCAAACTGTGATGGCTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590617.5
CDS-3UTR CCA 90 bp GCTTTTTCAAAGTTTCAATGGGTTGCAGTGCCCCACCACCATGCACCAGAGATGTATCTAGATCATCTTTaGGATGATGAAGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: AFSKFQWVAVPHHHAPEMYLDHL*DDEGLL
Trigger: CAGTAACCCTTCATCATCCCAAAGATGATCTAGATA...CATCTCTGGTGCATGGTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp GCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGCACAATTACATGTTGTaGTCTCTGATGGTATCTTAT +
Preference number: 4 (lower is better)
Translates to: AEVWAQSLGSETEPNPTKHNYML*SLMVSY
Trigger: ATAAGATACCATCAGAGACCACAACATGTAATTGTG...CTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp TCAAATGAAAAATATATCTTCCAGAATCTGATTCTCCTCCAACTCTTCAGGGGTGATAGCGCTGAGGTTTaGGCGCAGAGTTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SNEKYIFQNLILLQLFRGDSAEV*AQSLGS
Trigger: TGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATC...ACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATATTTTTCATTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTGGTGGAACATACTCTaGCAAGTAGAGATGGTTCTT +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWWWNIL*QVEMVL
Trigger: AAGAACCATCTCTACTTGCCAGAGTATGTTCCACCA...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGCTTGCTTTCAATGACTaGAGAGTTTTGAACTCTGGC +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWLAFND*RVLNSG
Trigger: GCCAGAGTTCAAAACTCTCCAGTCATTGAAAGCAAG...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp TCCTCCAACTCTTCAGGGGTTCTGTGCATCCCCATCTTCTTCCGGGTTGATTTTTCCAGTTTGAGTTCTTaGGGTTTAGTAAGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: SSNSSGVLCIPIFFRVDFSSLSS*GLVSCF
Trigger: AAAACAGCTTACTAAACCCCAAGAACTCAAACTGGA...AAAATCAACCCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGAGTTGGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CCA 90 bp AACTTGGTTCTTGGAAACTCTAAAAAGCAGAGCACCTCTCCTCCTCCAAAGGAAGCAACGGAACAAAGCTaGACAGAGAATGACTTTGAC +
Preference number: 4 (lower is better)
Translates to: NLVLGNSKKQSTSPPPKEATEQS*TENDFD
Trigger: GTCAAAGTCATTCTCTGTCCAGCTTTGTTCCGTTGC...TTCCTTTGGAGGAGGAGAGGTGCTCTGCTTTTTAGAGTTTCCAAGAACCAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR CAA 72 bp GCCATACCACAGAAAGCTCCACACTCCAAAGGCTTTTaGATATGGGATGAAACCGATTTGGTTACTCTCAGA +
Preference number: 4 (lower is better)
Translates to: AIPQKAPHSKGF*IWDETDLVTLR
Trigger: TCTGAGAGTAACCAAATCGGTTTCATCCCATATCAAAAAGCCTTTGGAGTGTGGAGCTTTCTGTGGTATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CAA 72 bp ATGAACACGATCTGCAGCAAGTCTATGACCACAGCATaGACTAGGAGTAGGCTTAAGATGTGGACATTCCTT +
Preference number: 4 (lower is better)
Translates to: MNTICSKSMTTA*TRSRLKMWTFL
Trigger: AAGGAATGTCCACATCTTAAGCCTACTCCTAGTCAATGCTGTGGTCATAGACTTGCTGCAGATCGTGTTCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR TCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCTCTCTATACTGTAGCTaGAGAGCTTCCCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPSLYCS*RASLSL
Trigger: CAAAGAAAGGGAAGCTCTTCAGCTACAGTATAGAGA...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp TGGGTCTTGACTCTTTATCCAATTTGCCAGTCTGTGTCTTTTAATTGGAGCATTGTAGGATGGCTGTCATaGACACGATCTGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: WVLTLYPICQSVSFNWSIVGWLS*TRSAAS
Trigger: ACTTGCTGCAGATCGTGTTCATGACAGCCATCCTAC...AATGCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR TCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGTCTTTCATATGCGAATaGAACCCAACTGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVSFICE*NPTVFL
Trigger: GAGGAAGACAGTTGGGTTTCATTCGCATATGAAAGA...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp AGCCAGCCATCACAGTTTGACTTCAATAAACTTGGTCCAGAGTCACTGCCATTCATCTTTCTTTTGACATaGCCACTGGGCATCATCTTT +
Preference number: 4 (lower is better)
Translates to: SQPSQFDFNKLGPESLPFIFLLT*PLGIIF
Trigger: AAAGATGATGCCCAGTGGTCATGTCAAAAGAAAGAT...GAATGGCAGTGACTCTGGACCAAGTTTATTGAAGTCAAACTGTGATGGCTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590617.5
CDS-3UTR TCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGATATCTTCCAGAATCTaGTTCTCCTCCAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWISSRI*FSSNSS
Trigger: TGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATAT...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTCTCTCGTGTTGTTTGTaGTGGCAGGGGCACCAACTC +
Preference number: 4 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSILSCCL*WQGHQL
Trigger: GAGTTGGTGCCCCTGCCATCACAAACAACACGAGAG...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCTTTGTCTACCAACACTaGCTAAGTCTTACTCCCAGT +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPFVYQH*LSLTPS
Trigger: ACTGGGAGTAAGACTTAGTCAGTGTTGGTAGACAAA...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGTTTGTCTACCAACACTaGCTAAGTCTTACTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVFVYQH*LSLTPS
Trigger: ACTGGGAGTAAGACTTAGTCAGTGTTGGTAGACAAA...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGGAAAAATGTATTGGTTaGTATTCTGCTGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKEKCIG*YSAESP
Trigger: TGGGCTTTCAGCAGAATATCAACCAATACATTTTTC...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp GTATTTCCTGAATCTGAATGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTATGATCAAACTACTCTaGGCAATTGTAATCCAGTCG +
Preference number: 4 (lower is better)
Translates to: VFPESECWPALLDWGSSPMIKLL*AIVIQS
Trigger: CGACTGGATTACAATTGCTCAGAGTAGTTTGATCAT...AGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAGATTCAGGAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR TCA 90 bp AACTTGGTTCTTGGAAACTCTAAAAAGCAGAGCACCTCTCCTCCTCCAAAGGAACTGAAAACAGCACACTaGTGGGTCTTGACTCTTTAT +
Preference number: 4 (lower is better)
Translates to: NLVLGNSKKQSTSPPPKELKTAH*WVLTLY
Trigger: ATAAAGAGTCAAGACCCATCAGTGTGCTGTTTTCAG...TTCCTTTGGAGGAGGAGAGGTGCTCTGCTTTTTAGAGTTTCCAAGAACCAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR TCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCATGTCACCTTCTGATTaGAGCTTTCACTTCCTAACC +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPMSPSD*SFHFLT
Trigger: GGTTAGGAAGTGAAAGCTTCAATCAGAAGGTGACAT...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS-3UTR GCA 90 bp ATATATCTTCCAGAATCTGATTCTCCTCCAACTCTTCAGGGGTTCTGTGCATCCTTTCTACTGGATACCTaGTGTTCCTGCATTCTAGCA +
Preference number: 4 (lower is better)
Translates to: IYLPESDSPPTLQGFCASFLLDT*CSCILA
Trigger: TGCTAGAATGCAGGAACAGCAGGTATCCAGTAGAAA...GGATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590617.5
CDS-3UTR GCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGAATGAACACTGGAGAGTaGTTTTTCTACTGGATACCT +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGMNTGE*FFYWIP
Trigger: AGGTATCCAGTAGAAAAAGCACTCTCCAGTGTTCAT...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATATTTCTCTGTTGGGACTaGAGGTTTTCTCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LVRQVPVKGETQLLCNEIFLCWD*RFSPWR
Trigger: TCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGAAA...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp ATTTTCTCTGTTGGGACTGCAGGTTTTCTCCCTGGAGATTCACAATTACATGTTTTTCTCTGTTGGGACTaGAGGTTTTCTCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: IFSVGTAGFLPGDSQLHVFLCWD*RFSPWR
Trigger: TCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGAAA...AACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp TCTTCTGAGATCTGCTTTTTCAAAGTTTCAATGGGTTGCAGTGCCCCACCACCAGGACATTCCTTCATGTaGAATTCTTCTTGTGGCATT +
Preference number: 4 (lower is better)
Translates to: SSEICFFKVSMGCSAPPPGHSFM*NSSCGI
Trigger: AATGCCACAAGAAGAATTGCACATGAAGGAATGTCC...TGGTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAAAGCAGATCTCAGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp TTTCCTGAAAACAGCACACTGATGGGTCTTGACTCTTTATCCAATTTGCCAGTCGTCATGAACACGATCTaGAGCAAGTCTATGACCACA +
Preference number: 4 (lower is better)
Translates to: FPENSTLMGLDSLSNLPVVMNTI*SKSMTT
Trigger: TGTGGTCATAGACTTGCTGCAGATCGTGTTCATGAC...GACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTTTTCAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR GCA 90 bp GTATTTCCTGAATCTGAATGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTAAAGCCGACAATAACTaGATGATTCTGGATGTGTCT +
Preference number: 4 (lower is better)
Translates to: VFPESECWPALLDWGSSPKADNN*MILDVS
Trigger: AGACACATCCAGAATCATGCAGTTATTGTCGGCTTT...AGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAGATTCAGGAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR GCA 90 bp AAATATATCTTCCAGAATCTGATTCTCCTCCAACTCTTCAGGGGTTCTGTGCATACCATGCACCAGAGATaGCCAAGAAAGCCGACAATA +
Preference number: 4 (lower is better)
Translates to: KYIFQNLILLQLFRGSVHTMHQR*PRKPTI
Trigger: TATTGTCGGCTTTCTTGGGCATCTCTGGTGCATGGT...ATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR GCA 90 bp TCAGAGACTGAACCAAATCCAACAAAGATGTCTCATACCTTAATAGGTTCCTTCAAAGTTTCAATGGGTTaGAGTGCCCCACCACCATGC +
Preference number: 4 (lower is better)
Translates to: SETEPNPTKMSHTLIGSFKVSMG*SAPPPC
Trigger: GCATGGTGGTGGGGCACTGCAACCCATTGAAACTTT...GAAGGAACCTATTAAGGTATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR GCA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATAAGCTTTGCAGCAGCTTaGATCACTCTCTCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: LVRQVPVKGETQLLCNEISFAAA*ITLSLV
Trigger: CACTAGAGAGAGAGTGATGCAAGCTGCTGCAAAGCT...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGTATCCGGCATCCAAATaGTGCTTCTGTTCTGTATAC +
Preference number: 4 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVYPASK*CFCSVY
Trigger: GTATACAGAACAGAAGCAGCATTTGGATGCCGGATA...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS-3UTR CCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCTCCACAGATGAACACTaGAGAGTGCTTTTTCTACTG +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPSTDEH*RVLFLL
Trigger: CAGTAGAAAAAGCACTCTCCAGTGTTCATCTGTGGA...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATAAGTAGGTCTGTGGTCTaGCTATGCTCAAGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: LVRQVPVKGETQLLCNEISRSVV*LCSSRN
Trigger: GTTCCTACTTGAGCATAGCCAGACCACAGACCTACT...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp ATTTTCTCTGTTGGGACTGCAGGTTTTCTCCCTGGAGATTCACAATTACATGTTAGTAGGTCTGTGGTCTaGCTATGCTCAAGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: IFSVGTAGFLPGDSQLHVSRSVV*LCSSRN
Trigger: GTTCCTACTTGAGCATAGCCAGACCACAGACCTACT...AACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGTGTTCTTATTCATTCTaGGATATTGGAGGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVCSYSF*DIGGVV
Trigger: GACCACCCCTCCAATATCCCAGAATGAATAAGAACA...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGAAAGAGACATGAGCTTTaGATCTATCTGGATAAGGAG +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGKRHEL*IYLDKE
Trigger: CTCCTTATCCAGATAGATCCAAAGCTCATGTCTCTT...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp TATATCTTCCAGAATCTGATTCTCCTCCAACTCTTCAGGGGTTCTGTGCATCCCAGGTCTGAATTTGCTTaGTGTTTCAGGATACTACAC +
Preference number: 4 (lower is better)
Translates to: YIFQNLILLQLFRGSVHPRSEFA*CFRILH
Trigger: GTGTAGTATCCTGAAACACCAAGCAAATTCAGACCT...GGGATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR CCA 90 bp GTATTTCCTGAATCTGAATGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGAGTGCTTTTTCTACTaGATACCTAGAAAGAACCAC +
Preference number: 4 (lower is better)
Translates to: VFPESECWPALLDWGSSPECFFY*IPRKNH
Trigger: GTGGTTCTTTCTAGGTATCCAGTAGAAAAAGCACTC...AGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAGATTCAGGAAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCTACAAAATACAGAGATaGGGTTTCACCGTGTTAGCC +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPYKIQR*GFTVLA
Trigger: GGCTAACACGGTGAAACCCCATCTCTGTATTTTGTA...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS-3UTR TCA 90 bp CTATCTTCTGAGATCTGCTTTTTCAAAGTTTCAATGGGTTGCAGTGCCCCACCAATATCTTCCAGAATCTaGTTCTCCTCCAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSSEICFFKVSMGCSAPPISSRI*FSSNSS
Trigger: TGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATAT...TGGTGGGGCACTGCAACCCATTGAAACTTTGAAAAAGCAGATCTCAGAAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590617.5
CDS-3UTR TCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGATTTCTAGCAGAAGTTTaGGAAGGAAACACTCTTGAA +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGFLAEV*EGNTLE
Trigger: TTCAAGAGTGTTTCCTTCTCAAACTTCTGCTAGAAA...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp AGTCTGGTGGTGAGAAAATCTCTCAGCATTTGCTTGTCTGTAAAGGATTTTATTGTGAGATGGGTTTCCTaGAAACAGCACACTGATGGG +
Preference number: 4 (lower is better)
Translates to: SLVVRKSLSICLSVKDFIVRWVS*KQHTDG
Trigger: CCCATCAGTGTGCTGTTTTCAGGAAACCCATCTCAC...AATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTCTCACCACCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR TCA 90 bp TGGGTCTTGACTCTTTATCCAATTTGCCAGTCTGTGTCTTTTAATTGGAGCATTGTGTGTCTCTGCATGTaGGATGGGTTTCCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: WVLTLYPICQSVSFNWSIVCLCM*DGFPEN
Trigger: GTTTTCAGGAAACCCATCTCACATGCAGAGACACAC...AATGCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR GCA 90 bp AACTTGGTTCTTGGAAACTCTAAAAAGCAGAGCACCTCTCCTCCTCCAAAGGAAGGACATTCCTTCATGTaGAATTCTTCTTGTGGCATT +
Preference number: 4 (lower is better)
Translates to: NLVLGNSKKQSTSPPPKEGHSFM*NSSCGI
Trigger: AATGCCACAAGAAGAATTGCACATGAAGGAATGTCC...TTCCTTTGGAGGAGGAGAGGTGCTCTGCTTTTTAGAGTTTCCAAGAACCAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR GCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCAAAGCCGACAATAACTaGATGATTCTGGATGTGTCT +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPKADNN*MILDVS
Trigger: AGACACATCCAGAATCATGCAGTTATTGTCGGCTTT...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGAAAGATGAGAGAGTCTaGCTTTCTGAAACTGCTTAT +
Preference number: 4 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWKDERV*LSETAY
Trigger: ATAAGCAGTTTCAGAAAGGCAGACTCTCTCATCTTT...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGGGAGTTCAAAGGACATaGTGTGTCCTTTTCCATTTT +
Preference number: 4 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVGVQRT*CVLFHF
Trigger: AAAATGGAAAAGGACACAGCATGTCCTTTGAACTCC...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp TTAGTTGACAAGTATGTGCTTAGCAGCCTAACAGCAGCAGCAGAACAGCTGGATAACACTACACTTCAATaGCCAAATTTCTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LVDKYVLSSLTAAAEQLDNTTLQ*PNFFLS
Trigger: GGACAAGAAGAAATTTGGGCATTGAAGTGTAGTGTT...ATCCAGCTGTTCTGCTGCTGCTGTTAGGCTGCTAAGCACATACTTGTCAACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592521.5
CDS-3UTR CCA 90 bp TTTCCTGAAAACAGCACACTGATGGGTCTTGACTCTTTATCCAATTTGCCAGTCTTGATAGTAGGTCTGTaGTCTGGCTATGCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: FPENSTLMGLDSLSNLPVLIVGL*SGYAQV
Trigger: TACTTGAGCATAGCCAGACCACAGACCTACTATCAA...GACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTTTTCAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CCA 90 bp TATATCTTCCAGAATCTGATTCTCCTCCAACTCTTCAGGGGTTCTGTGCATCCCTATCTAGATCATCTTTaGGATGATGAAGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: YIFQNLILLQLFRGSVHPYLDHL*DDEGLL
Trigger: CAGTAACCCTTCATCATCCCAAAGATGATCTAGATA...GGGATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGATATCTAGATCATCTTTaGGATGATGAAGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGYLDHL*DDEGLL
Trigger: CAGTAACCCTTCATCATCCCAAAGATGATCTAGATA...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCGAGAGTTTTGAACTCTaGCTAAACCAGGATCATCAT +
Preference number: 4 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPESFEL*LNQDHH
Trigger: ATGATGATCCTGGTTTAGCCAGAGTTCAAAACTCTC...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATAGGGATGAAACCGATTTaGTTACTCTCAGAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: LVRQVPVKGETQLLCNEIGMKPI*LLSEVN
Trigger: GTTCACCTCTGAGAGTAACCAAATCGGTTTCATCCC...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
3UTR CAA 72 bp AAACTTGGTCCAGAGTCACTGCCATTCATATCCAGTTaGAGTTCTTGGGGTTTAGTAAGCTGTTTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KLGPESLPFISS*SSWGLVSCFSA
Trigger: TGCTGAAAAACAGCTTACTAAACCCCAAGAACTCAAACTGGATATGAATGGCAGTGACTCTGGACCAAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590617.5
3UTR CAA 72 bp TTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTaGGTTCTTGGAAACTCTAAAAAGCAGAGCACCTCT +
Preference number: 4 (lower is better)
Translates to: FSWIISCRVFSN*VLGNSKKQSTS
Trigger: AGAGGTGCTCTGCTTTTTAGAGTTTCCAAGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR CAA 72 bp TATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTaGTGGCGTTCTCTGTATTTCCTGAATCTGAATGTT +
Preference number: 4 (lower is better)
Translates to: YVSWSCSSRGVS*WRSLYFLNLNV
Trigger: AACATTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR TCA 90 bp TCAGAGACTGAACCAAATCCAACAAAGATGTCTCATACCTTAATAGGTTCCTTCCTCAGCATGAAGGTCTaGATTTGCTTGGTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SETEPNPTKMSHTLIGSFLSMKV*ICLVFQ
Trigger: CTGAAACACCAAGCAAATTCAGACCTTCATGCTGAG...GAAGGAACCTATTAAGGTATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR GCA 90 bp AGTCTGGTGGTGAGAAAATCTCTCAGCATTTGCTTGTCTGTAAAGGATTTTATTTTTCTCTGTTGGGACTaGAGGTTTTCTCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLVVRKSLSICLSVKDFIFLCWD*RFSPWR
Trigger: TCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGAAA...AATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTCTCACCACCAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CCA 90 bp TGCTTTTTAATAGATGATGATGTTCCAAGCAGCCAGCCATCACAGTTTGACTTCTCCACAGATGAACACTaGAGAGTGCTTTTTCTACTG +
Preference number: 4 (lower is better)
Translates to: CFLIDDDVPSSQPSQFDFSTDEH*RVLFLL
Trigger: CAGTAGAAAAAGCACTCTCCAGTGTTCATCTGTGGA...GAAGTCAAACTGTGATGGCTGGCTGCTTGGAACATCATCATCTATTAAAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp ATTTTCTCTGTTGGGACTGCAGGTTTTCTCCCTGGAGATTCACAATTACATGTTTTGATAGTAGGTCTGTaGTCTGGCTATGCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: IFSVGTAGFLPGDSQLHVLIVGL*SGYAQV
Trigger: TACTTGAGCATAGCCAGACCACAGACCTACTATCAA...AACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp CATCACAGTTTGACTTCAATAAACAATTGTAATCCAGTCGAGACTGGTGAAGCTTCTGAAGCTGAATCCTaGACTGCAGACTTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: HHSLTSINNCNPVETGEASEAES*TADLGL
Trigger: AAGACCTAAGTCTGCAGTCCAGGATTCAGCTTCAGA...AGCTTCACCAGTCTCGACTGGATTACAATTGTTTATTGAAGTCAAACTGTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592611.5
CDS-3UTR CCA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGACACAATTACATGTTGTaGTCTCTGATGGTATCTTAT +
Preference number: 4 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGHNYML*SLMVSY
Trigger: ATAAGATACCATCAGAGACCACAACATGTAATTGTG...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATATGGTGGAACATACTCTaGCAAGTAGAGATGGTTCTT +
Preference number: 4 (lower is better)
Translates to: LVRQVPVKGETQLLCNEIWWNIL*QVEMVL
Trigger: AAGAACCATCTCTACTTGCCAGAGTATGTTCCACCA...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGTCCAGTTTGAGTTCTTaGGGTTTAGTAAGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVSSLSS*GLVSCF
Trigger: AAAACAGCTTACTAAACCCCAAGAACTCAAACTGGA...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587139.5
CDS-3UTR TCA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATATTGATTTTAGAGGACTaGGTCGGAAAGTACCATGAT +
Preference number: 4 (lower is better)
Translates to: LVRQVPVKGETQLLCNEILILED*VGKYHD
Trigger: ATCATGGTACTTTCCGACTCAGTCCTCTAAAATCAA...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp TGCTTTTTAATAGATGATGATGTTCCAAGCAGCCAGCCATCACAGTTTGACTTCGGACATTCCTTCATGTaGAATTCTTCTTGTGGCATT +
Preference number: 4 (lower is better)
Translates to: CFLIDDDVPSSQPSQFDFGHSFM*NSSCGI
Trigger: AATGCCACAAGAAGAATTGCACATGAAGGAATGTCC...GAAGTCAAACTGTGATGGCTGGCTGCTTGGAACATCATCATCTATTAAAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR GCA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATAAAAGCCGACAATAACTaGATGATTCTGGATGTGTCT +
Preference number: 4 (lower is better)
Translates to: LVRQVPVKGETQLLCNEIKADNN*MILDVS
Trigger: AGACACATCCAGAATCATGCAGTTATTGTCGGCTTT...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTACCATGCACCAGAGATaGCCAAGAAAGCCGACAATA +
Preference number: 4 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSITMHQR*PRKPTI
Trigger: TATTGTCGGCTTTCTTGGGCATCTCTGGTGCATGGT...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTTCTCTTGGGATAGTCTaGAACAGCTTTGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSISLGIV*NSFEAL
Trigger: CAGAGCCTCAAAGCTGTTGCAGACTATCCCAAGAGA...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp CATCACAGTTTGACTTCAATAAACAATTGTAATCCAGTCGAGACTGGTGAAGCTTTGATAGTAGGTCTGTaGTCTGGCTATGCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: HHSLTSINNCNPVETGEALIVGL*SGYAQV
Trigger: TACTTGAGCATAGCCAGACCACAGACCTACTATCAA...AGCTTCACCAGTCTCGACTGGATTACAATTGTTTATTGAAGTCAAACTGTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592611.5
CDS-3UTR CCA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGCACAATTACATGTTGTaGTCTCTGATGGTATCTTAT +
Preference number: 4 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVHNYML*SLMVSY
Trigger: ATAAGATACCATCAGAGACCACAACATGTAATTGTG...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp AATGCTATAAGGGATTCTGAAGCTGAATCCTGGACTGCAGACTTAGGTCTTTGCCACAATTACATGTTGTaGTCTCTGATGGTATCTTAT +
Preference number: 4 (lower is better)
Translates to: NAIRDSEAESWTADLGLCHNYML*SLMVSY
Trigger: ATAAGATACCATCAGAGACCACAACATGTAATTGTG...GCAAAGACCTAAGTCTGCAGTCCAGGATTCAGCTTCAGAATCCCTTATAGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CCA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTTTCATTCTGGGATATTaGAGGGGTGGTCACCCAAAC +
Preference number: 4 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSIFILGY*RGGHPN
Trigger: GTTTGGGTGACCACCCCTCCAATATCCCAGAATGAA...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp GATGGGTTTCCTGAAAACAGCACACTGATGGGTCTTGACTCTTTATCCAATTTGATGGTCTTTACATTTTaGCATGATTTTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: DGFPENSTLMGLDSLSNLMVFTF*HDFAAA
Trigger: AGCTGCTGCAAAATCATGCCAAAATGTAAAGACCAT...CAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTTTTCAGGAAACCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR TCA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATATTTCTAGCAGAAGTTTaGGAAGGAAACACTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LVRQVPVKGETQLLCNEIFLAEV*EGNTLE
Trigger: TTCAAGAGTGTTTCCTTCTCAAACTTCTGCTAGAAA...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR TCA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATATGGAACGTATACTACTaGTTGTTCTTCATCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LVRQVPVKGETQLLCNEIWNVYY*LFFIRN
Trigger: GTTTCTGATGAAGAACAATCAGTAGTATACGTTCCA...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS-3UTR GCA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATAAAAGATGAGAGAGTCTaGCTTTCTGAAACTGCTTAT +
Preference number: 4 (lower is better)
Translates to: LVRQVPVKGETQLLCNEIKDERV*LSETAY
Trigger: ATAAGCAGTTTCAGAAAGGCAGACTCTCTCATCTTT...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR GCA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTTTCACTTTGGTTCTCTaGATCAAGAACTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSIFTLVL*IKNCGP
Trigger: AGGCCCACAGTTCTTGATGCAGAGAACCAAAGTGAA...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CCA 90 bp AGTCTGGTGGTGAGAAAATCTCTCAGCATTTGCTTGTCTGTAAAGGATTTTATTTCCACAGATGAACACTaGAGAGTGCTTTTTCTACTG +
Preference number: 4 (lower is better)
Translates to: SLVVRKSLSICLSVKDFISTDEH*RVLFLL
Trigger: CAGTAGAAAAAGCACTCTCCAGTGTTCATCTGTGGA...AATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTCTCACCACCAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CCA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATATATCTAGATCATCTTTaGGATGATGAAGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: LVRQVPVKGETQLLCNEIYLDHL*DDEGLL
Trigger: CAGTAACCCTTCATCATCCCAAAGATGATCTAGATA...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CCA 90 bp TTTCCTGAAAACAGCACACTGATGGGTCTTGACTCTTTATCCAATTTGCCAGTCCACAATTACATGTTGTaGTCTCTGATGGTATCTTAT +
Preference number: 4 (lower is better)
Translates to: FPENSTLMGLDSLSNLPVHNYML*SLMVSY
Trigger: ATAAGATACCATCAGAGACCACAACATGTAATTGTG...GACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTTTTCAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CCA 90 bp TTTCCTGAAAACAGCACACTGATGGGTCTTGACTCTTTATCCAATTTGCCAGTCGAGTGTTTTCCAACTTaGTTCTTGGAAACTCTAAAA +
Preference number: 4 (lower is better)
Translates to: FPENSTLMGLDSLSNLPVECFPT*FLETLK
Trigger: TTTTAGAGTTTCCAAGAACCAAGTTGGAAAACACTC...GACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTTTTCAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
3UTR CAA 72 bp AGTTCCAACACTACACTTCAATGCCCAAATTTCTTCTaGTCCTTTTTAGTTGACAAGTATGTGCTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSNTTLQCPNFF*SFLVDKYVLSS
Trigger: GCTGCTAAGCACATACTTGTCAACTAAAAAGGACAAGAAGAAATTTGGGCATTGAAGTGTAGTGTTGGAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592521.5
3UTR CAA 72 bp GCAAGTCTGGTGGTGAGAAAATCTCTCAGCATTTGCTaGTCTGTAAAGGATTTTATTTCTCCTTCACTTATG +
Preference number: 4 (lower is better)
Translates to: ASLVVRKSLSIC*SVKDFISPSLM
Trigger: CATAAGTGAAGGAGAAATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTCTCACCACCAGACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR TCA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTTCTTTCATATGCGAATaGAACCCAACTGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSISFICE*NPTVFL
Trigger: GAGGAAGACAGTTGGGTTTCATTCGCATATGAAAGA...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR TCA 90 bp TCAAATGAAAAATATATCTTCCAGAATCTGATTCTCCTCCAACTCTTCAGGGGTATATCTTCCAGAATCTaGTTCTCCTCCAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: SNEKYIFQNLILLQLFRGISSRI*FSSNSS
Trigger: TGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATAT...ACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATATTTTTCATTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR GCA 90 bp TCAGAGACTGAACCAAATCCAACAAAGATGTCTCATACCTTAATAGGTTCCTTCATTATTGGACTCCTTTaGTTCCTCCCTTTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SETEPNPTKMSHTLIGSFIIGLL*FLPLSH
Trigger: ATGACTTAAAGGGAGGAAGCAAAGGAGTCCAATAAT...GAAGGAACCTATTAAGGTATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR CCA 90 bp TTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTATCTAGATCATCTTTaGGATGATGAAGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: FLHFNFGESDNYVSWSCSYLDHL*DDEGLL
Trigger: CAGTAACCCTTCATCATCCCAAAGATGATCTAGATA...AGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CCA 90 bp CATCACAGTTTGACTTCAATAAACAATTGTAATCCAGTCGAGACTGGTGAAGCTCACAATTACATGTTGTaGTCTCTGATGGTATCTTAT +
Preference number: 4 (lower is better)
Translates to: HHSLTSINNCNPVETGEAHNYML*SLMVSY
Trigger: ATAAGATACCATCAGAGACCACAACATGTAATTGTG...AGCTTCACCAGTCTCGACTGGATTACAATTGTTTATTGAAGTCAAACTGTGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592611.5
3UTR CAA 72 bp CACTCCAAAGGCTTTTTGATATGGGATGAAACCGATTaGGTTACTCTCAGAGGTGAACTTTATAAAGAAATT +
Preference number: 4 (lower is better)
Translates to: HSKGFLIWDETD*VTLRGELYKEI
Trigger: AATTTCTTTATAAAGTTCACCTCTGAGAGTAACCAAATCGGTTTCATCCCATATCAAAAAGCCTTTGGAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR GCA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTCTAACTTATAGCTTCTaGAGGTATGATTTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSILTYSF*RYDFFY
Trigger: GTAGAAGAAATCATACCTGCAGAAGCTATAAGTTAG...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS-3UTR CAA 90 bp CAAGGACCTCCCTCTTGGCACTCCCTCTGGCTCCACTGGACACCCTCCTCACCCGCCACGTCCGCCATCTaGAAACAACCGCCACTCGGG +
Preference number: 5 (lower is better)
Translates to: QGPPSWHSLWLHWTPSSPATSAI*KQPPLG
Trigger: CCCGAGTGGCGGTTGTTTCAAGATGGCGGACGTGGC...GGGTGAGGAGGGTGTCCAGTGGAGCCAGAGGGAGTGCCAAGAGGGAGGTCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592611.5
CDS TCA 90 bp GCTCAGCTGTGGCCTGCAAGGAAGAAGGGAGGGAGAGGCCAGCTCTaGTGTCCTGGTCAGATCTTGAACAGGGCCTGTCCTCTGGCCAAC +
Preference number: 5 (lower is better)
Translates to: AQLWPARKKGGRGQL*CPGQILNRACPLAN
Trigger: GTTGGCCAGAGGACAGGCCCTGTTCAAGATCTGACCAGGACATCAGAGCTGGCCTCTCCCTCCCTTCTTCCTTGCAGGCCACAGCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS CCA 90 bp GTGGCCTGCAAGGAAGAAGGGAGGGAGAGGCCAGCTCTGATGTCCTaGTCAGATCTTGAACAGGGCCTGTCCTCTGGCCAACCACCTCTT +
Preference number: 5 (lower is better)
Translates to: VACKEEGRERPALMS*SDLEQGLSSGQPPL
Trigger: AAGAGGTGGTTGGCCAGAGGACAGGCCCTGTTCAAGATCTGACCAGGACATCAGAGCTGGCCTCTCCCTCCCTTCTTCCTTGCAGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS-3UTR CAA 90 bp CATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGGTTTGGGCGCAGAGTTaGGGCTCAGAGACTGAACCA +
Preference number: 5 (lower is better)
Translates to: HDSRPQLLWRDSAEVWAQVWAQS*GSETEP
Trigger: TGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAAC...CTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS CCA 90 bp TCTTACAGCTGCAGAACAGGTGAAGGGCACGGGCCTAGGGCATCCTaGAAGACGTCAGGCCATGGGCCATTGTTTGTGTGCTGGTGCCAA +
Preference number: 5 (lower is better)
Translates to: SYSCRTGEGHGPRAS*KTSGHGPLFVCWCQ
Trigger: TTGGCACCAGCACACAAACAATGGCCCATGGCCTGACGTCTTCCAGGATGCCCTAGGCCCGTGCCCTTCACCTGTTCTGCAGCTGTAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS-3UTR CAA 90 bp AAGGAGTCCGCCACAGCCTCCATCTCTCTTAGCAGACTTCGTCCAGCTCTGCCCGTTTGGGCGCAGAGTTaGGGCTCAGAGACTGAACCA +
Preference number: 5 (lower is better)
Translates to: KESATASISLSRLRPALPVWAQS*GSETEP
Trigger: TGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAAC...GGGCAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS CCA 90 bp AGGGACCTGGAAAAGTCACATAGGCAGGAAACAGCAGCATGTCCTTaGGAGACGGCCAAGAGTTGTGAGCTGCAGAGGGGAGAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: RDLEKSHRQETAACP*ETAKSCELQRGEGR
Trigger: CCTCCCTTCTCCCCTCTGCAGCTCACAACTCTTGGCCGTCTCCCAAGGACATGCTGCTGTTTCCTGCCTATGTGACTTTTCCAGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS-3UTR CAA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTCAAAGTTTCAATGGGTaGCAGTGCCCCACCACCATG +
Preference number: 5 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSAQSFNG*QCPTTM
Trigger: CATGGTGGTGGGGCACTGCAACCCATTGAAACTTTG...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTGTTTGGGCGCAGAGTTaGGGCTCAGAGACTGAACCA +
Preference number: 5 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGVWAQS*GSETEP
Trigger: TGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAAC...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAATTGGCTCTCGTGTaGTTTGTGATGGCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYQLALV*FVMAGA
Trigger: TGCCCCTGCCATCACAAACAACACGAGAGCCAATTG...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTAGTAGAGATGGTTCTTaGGGGCCACGAGCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGSRDGS*GPRAEH
Trigger: GTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTACT...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATCTCTGCTTTTCCAAATaGGCCATTCATGGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHLCFSK*AIHGEA
Trigger: TGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAG...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACTTTCTCTCACAGGAGTaGGGCAGCAGGGTGGGCAAT +
Preference number: 5 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHFLSQE*GSRVGN
Trigger: ATTGCCCACCCTGCTGCCCAACTCCTGTGAGAGAAA...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS GCA 90 bp AGTACCTGGAAGAATCAAGGAGGGCAAACACCACAGTCTTACAGCTaGAGAACAGGTGAAGGGCACGGGCCTAGGGCATCCTGGAAGACG +
Preference number: 5 (lower is better)
Translates to: STWKNQGGQTPQSYS*RTGEGHGPRASWKT
Trigger: CGTCTTCCAGGATGCCCTAGGCCCGTGCCCTTCACCTGTTCTGCAGCTGTAAGACTGTGGTGTTTGCCCTCCTTGATTCTTCCAGGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS-3UTR CAA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACCAAAGTTTCAATGGGTaGCAGTGCCCCACCACCATG +
Preference number: 5 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHQSFNG*QCPTTM
Trigger: CATGGTGGTGGGGCACTGCAACCCATTGAAACTTTG...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp AGTTGGGCAGCAGGGTGGGCAATGGTGAGGCACTATCCGCAACGCCCTCGGCATTGTCACTGTCCCTCTTaGGGGTCTACATGTATCTTT +
Preference number: 5 (lower is better)
Translates to: SWAAGWAMVRHYPQRPRHCHCPS*GSTCIF
Trigger: AAAGATACATGTAGACCCCAAAGAGGGACAGTGACA...ATGCCGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACCAATTGGCTCTCGTGTaGTTTGTGATGGCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHQLALV*FVMAGA
Trigger: TGCCCCTGCCATCACAAACAACACGAGAGCCAATTG...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACAGCCCATTGAGCTCTTaGGTTATGGGATGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHSPLSS*VMGWAA
Trigger: AGCTGCCCATCCCATAACCAAAGAGCTCAATGGGCT...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGGTAGGGAGACCCTGCTaGGGTGGTGGAACATACTCT +
Preference number: 5 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWVGRPC*GGGTYS
Trigger: AGAGTATGTTCCACCACCCAAGCAGGGTCTCCCTAC...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTAGGATAAATCGTGAGTaGGAAGGAGTCCGCCACAGC +
Preference number: 5 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGRINRE*EGVRHS
Trigger: GCTGTGGCGGACTCCTTCCAACTCACGATTTATCCT...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS TCA 90 bp GGAAGAAGGGAGGGAGAGGCCAGCTCTGATGTCCTGGTCAGATCTTaGACAGGGCCTGTCCTCTGGCCAACCACCTCTTCTACTTTCTTA +
Preference number: 5 (lower is better)
Translates to: GRREGEASSDVLVRS*TGPVLWPTTSSTFL
Trigger: TAAGAAAGTAGAAGAGGTGGTTGGCCAGAGGACAGGCCCTGTTCAAGATCTGACCAGGACATCAGAGCTGGCCTCTCCCTCCCTTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS GCA 90 bp CAGGGCCTGTCCTCTGGCCAACCACCTCTTCTACTTTCTTACAAATaGCAACGCTGCTTTCTACTCCTGGGCCTTCTGGATCCTCCGTGT +
Preference number: 5 (lower is better)
Translates to: QGLSSGQPPLLLSYK*QRCFLLLGLLDPPC
Trigger: ACACGGAGGATCCAGAAGGCCCAGGAGTAGAAAGCAGCGTTGGCATTTGTAAGAAAGTAGAAGAGGTGGTTGGCCAGAGGACAGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS-3UTR CAA 90 bp GATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTATGTGTCTTAGGATGTaGAGGGGTCATGTTTGTAGG +
Preference number: 5 (lower is better)
Translates to: DSRPQLLWRDSAEVWAQSMCLRM*RGHVCR
Trigger: CCTACAAACATGACCCCTCAACATCCTAAGACACAT...ACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGCAATTGGCTCTCGTGTaGTTTGTGATGGCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWQLALV*FVMAGA
Trigger: TGCCCCTGCCATCACAAACAACACGAGAGCCAATTG...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACGAGACTGACTCACAATaGGCTCTCGTGTTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYETDSQ*ALVLFV
Trigger: CACAAACAACACGAGAGCCAATTGTGAGTCAGTCTC...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACACTGTGATCCTTTTCTaGATCCTCTGGCATCCTCTC +
Preference number: 5 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYTVILF*ILWHPL
Trigger: GAGAGGATGCCAGAGGATCAAGAAAAGGATCACAGT...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTGGCATGTGTCCAGTCTaGCTTTGGGAAGTGTCTAGA +
Preference number: 5 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGGMCPV*LWEVSR
Trigger: TCTAGACACTTCCCAAAGCAAGACTGGACACATGCC...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp GGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTTTGGGCTTTGACTTCAATAAACTaGGTCCAGAGTCACTGCCAT +
Preference number: 5 (lower is better)
Translates to: GPSFSGGIALRFGRRVWALTSIN*VQSHCH
Trigger: ATGGCAGTGACTCTGGACCAAGTTTATTGAAGTCAA...AGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CAA 90 bp GATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTTGGGCGCAGAGTGCCAGCCATCACAGTTaGACTTCAATAAACTTGGTC +
Preference number: 5 (lower is better)
Translates to: DSRPQLLWRDSAEVWAQSASHHS*TSINLV
Trigger: GACCAAGTTTATTGAAGTCAAACTGTGATGGCTGGC...ACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS CCA 90 bp TACTTTCTTACAAATGCCAACGCTGCTTTCTACTCCTGGGCCTTCTaGATCCTCCGTGTTCCAAGGACCTCCCTCTTGGCACTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: YFLTNANAAFYSWAF*ILRVPRTSLLALPL
Trigger: CAGAGGGAGTGCCAAGAGGGAGGTCCTTGGAACACGGAGGATCCAGAAGGCCCAGGAGTAGAAAGCAGCGTTGGCATTTGTAAGAAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS CCA 90 bp GGACTGGCCAATCTCAGCACTCAAAGAATGGGGAGAAGAACAGGGTaGGGCAGTACCTGGAAGAATCAAGGAGGGCAAACACCACAGTCT +
Preference number: 5 (lower is better)
Translates to: GLANLSTQRMGRRTG*GSTWKNQGGQTPQS
Trigger: AGACTGTGGTGTTTGCCCTCCTTGATTCTTCCAGGTACTGCCCCACCCTGTTCTTCTCCCCATTCTTTGAGTGCTGAGATTGGCCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS CCA 90 bp TCCCTCATCTCAGCATGGGACTGGCCAATCTCAGCACTCAAAGAATaGGGAGAAGAACAGGGTGGGGCAGTACCTGGAAGAATCAAGGAG +
Preference number: 5 (lower is better)
Translates to: SLISAWDWPISALKE*GEEQGGAVPGRIKE
Trigger: CTCCTTGATTCTTCCAGGTACTGCCCCACCCTGTTCTTCTCCCCATTCTTTGAGTGCTGAGATTGGCCAGTCCCATGCTGAGATGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS-3UTR CAA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGGTTTTAGAAGAAGCTTaGTCTCCTGCTGGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWVLEEA*SPAGPA
Trigger: TGCTGGCCCAGCAGGAGACAAAGCTTCTTCTAAAAC...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACGAGACTGACTCACAATaGGCTCTCGTGTTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHETDSQ*ALVLFV
Trigger: CACAAACAACACGAGAGCCAATTGTGAGTCAGTCTC...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACTGGGATGAAACCGATTaGGTTACTCTCAGAGGTGAA +
Preference number: 5 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYWDETD*VTLRGE
Trigger: TTCACCTCTGAGAGTAACCAAATCGGTTTCATCCCA...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACTGGATAAACACAAGTTaGCCTCCTGGAAAGCGGACT +
Preference number: 5 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHWINTS*PPGKRT
Trigger: AGTCCGCTTTCCAGGAGGCAAACTTGTGTTTATCCA...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp AGCCACGCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACTCATGGGGATCAGGTTaGGATAAACACAAGTTTGCC +
Preference number: 5 (lower is better)
Translates to: SHADSLHAGCPGWYDFVYSWGSG*DKHKFA
Trigger: GGCAAACTTGTGTTTATCCAAACCTGATCCCCATGA...GTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGCGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTATCTCTATTATGAACTaGGTGCCGGAAGCAGGGACA +
Preference number: 5 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGISIMN*VPEAGT
Trigger: TGTCCCTGCTTCCGGCACCAAGTTCATAATAGAGAT...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS GCA 90 bp TCCTCTGGCCAACCACCTCTTCTACTTTCTTACAAATGCCAACGCTaGTTTCTACTCCTGGGCCTTCTGGATCCTCCGTGTTCCAAGGAC +
Preference number: 5 (lower is better)
Translates to: SSGQPPLLLSYKCQR*FLLLGLLDPPCSKD
Trigger: GTCCTTGGAACACGGAGGATCCAGAAGGCCCAGGAGTAGAAAGCAGCGTTGGCATTTGTAAGAAAGTAGAAGAGGTGGTTGGCCAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS CCA 90 bp CTCAGCACTCAAAGAATGGGGAGAAGAACAGGGTGGGGCAGTACCTaGAAGAATCAAGGAGGGCAAACACCACAGTCTTACAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LSTQRMGRRTGWGST*KNQGGQTPQSYSCR
Trigger: TCTGCAGCTGTAAGACTGTGGTGTTTGCCCTCCTTGATTCTTCCAGGTACTGCCCCACCCTGTTCTTCTCCCCATTCTTTGAGTGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS-3UTR CAA 90 bp CTTGCTCCCAAGGATTGGCTGGGTCTCACCCTCCAGCCCATTGAGCTCTTTGGTAGGTCTTTGCTTGGTTaGATAGTAGGTCTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: LAPKDWLGLTLQPIELFGRSLLG*IVGLWS
Trigger: AGACCACAGACCTACTATCAAACCAAGCAAAGACCT...ACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAATCCTTGGGAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACATGTGTCTTAGGATGTaGAGGGGTCATGTTTGTAGG +
Preference number: 5 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHMCLRM*RGHVCR
Trigger: CCTACAAACATGACCCCTCAACATCCTAAGACACAT...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACTGGGATGAAACCGATTaGGTTACTCTCAGAGGTGAA +
Preference number: 5 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHWDETD*VTLRGE
Trigger: TTCACCTCTGAGAGTAACCAAATCGGTTTCATCCCA...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp GAGGCTACTAGGGACCACTGCAAGCTGAAGGACCCATCTCAAGAGCTCTGTGGGTGCAGACTTAGGTCTTaGCTTGGTTTGATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: EATRDHCKLKDPSQELCGCRLRS*LGLIVG
Trigger: ACCTACTATCAAACCAAGCAAAGACCTAAGTCTGCA...CCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTAGTAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp GCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGGTTTTAGAAGAAGCTTaGTCTCCTGCTGGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: AEVWAQSLGSETEPNPTKVLEEA*SPAGPA
Trigger: TGCTGGCCCAGCAGGAGACAAAGCTTCTTCTAAAAC...CTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp TTCTCCTCCAACTCTTCAGGGGTTCTGTGCATCCCCATCTTCTTCCGGGTTGATGTTTTAGAAGAAGCTTaGTCTCCTGCTGGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: FSSNSSGVLCIPIFFRVDVLEEA*SPAGPA
Trigger: TGCTGGCCCAGCAGGAGACAAAGCTTCTTCTAAAAC...ATCAACCCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGAGTTGGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CAA 90 bp GTAGAGATGGTTCTTTGGGGCCACGAGCAGAGCACCTGTGAGGCCTGGTCAGCTGCCAGCCATCACAGTTaGACTTCAATAAACAATTGT +
Preference number: 5 (lower is better)
Translates to: VEMVLWGHEQSTCEAWSAASHHS*TSINNC
Trigger: ACAATTGTTTATTGAAGTCAAACTGTGATGGCTGGC...AGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp GGGATAGCGCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCTGTCACTGTCCCTCTTaGGGGTCTACATGTATCTTT +
Preference number: 5 (lower is better)
Translates to: GIALRFGRRVWAQRLNQICHCPS*GSTCIF
Trigger: AAAGATACATGTAGACCCCAAAGAGGGACAGTGACA...GATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGTGTCACTGTCCCTCTTaGGGGTCTACATGTATCTTT +
Preference number: 5 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWCHCPS*GSTCIF
Trigger: AAAGATACATGTAGACCCCAAAGAGGGACAGTGACA...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp AGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTGTTTGGGCGCAGAGTTaGGGCTCAGAGACTGAACCA +
Preference number: 5 (lower is better)
Translates to: RFGRRVWAQRLNQIQQRCVWAQS*GSETEP
Trigger: TGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAAC...ACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATCTGAGGGCTCTTAGTTaGCCATCCACCCATTTCTGC +
Preference number: 5 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHLRALS*PSTHFC
Trigger: GCAGAAATGGGTGGATGGCAAACTAAGAGCCCTCAG...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGTTTCTCTCACAGGAGTaGGGCAGCAGGGTGGGCAAT +
Preference number: 5 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKFLSQE*GSRVGN
Trigger: ATTGCCCACCCTGCTGCCCAACTCCTGTGAGAGAAA...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATAGGATAAATCGTGAGTaGGAAGGAGTCCGCCACAGC +
Preference number: 5 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHRINRE*EGVRHS
Trigger: GCTGTGGCGGACTCCTTCCAACTCACGATTTATCCT...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp TCCTCCAACTCTTCAGGGGTTCTGTGCATCCCCATCTTCTTCCGGGTTGATTTTAAAGGAAGCAGATCTTaGTGGAGATTCCTGGGCGGG +
Preference number: 5 (lower is better)
Translates to: SSNSSGVLCIPIFFRVDFKGSRS*WRFLGG
Trigger: CCCGCCCAGGAATCTCCACAAAGATCTGCTTCCTTT...AAAATCAACCCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGAGTTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR CAA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGCAGCTACTCCAGAGGTaGAGGCAGGAGAATGGTGTG +
Preference number: 5 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKQLLQR*RQENGV
Trigger: CACACCATTCTCCTGCCTCAACCTCTGGAGTAGCTG...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS-3UTR CAA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGTGCAGCGGCATGATCTaGGCTCACTGCAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVCSGMI*AHCNLR
Trigger: GCGGAGGTTGCAGTGAGCCAAGATCATGCCGCTGCA...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS GCA 90 bp CAGTCCTCTGAGTATGGCACTTACTTTCTACTTGCTTTAGAGAGCTaGAAGAAGGCTGGAGTAGTCCAAAGGGTACTGGACTTTGGGGCC +
Preference number: 5 (lower is better)
Translates to: QSSEYGTYFLLALES*KKAGVVQRVLDFGA
Trigger: GGCCCCAAAGTCCAGTACCCTTTGGACTACTCCAGCCTTCTTGCAGCTCTCTAAAGCAAGTAGAAAGTAAGTGCCATACTCAGAGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS-3UTR CAA 90 bp GCAGACTCGCTGCATGCAGGCTGCCCTGGGTGGTATGACTTTGTCTACCAACACGCCAGCCATCACAGTTaGACTTCAATAAACAATTGT +
Preference number: 5 (lower is better)
Translates to: ADSLHAGCPGWYDFVYQHASHHS*TSINNC
Trigger: ACAATTGTTTATTGAAGTCAAACTGTGATGGCTGGC...GTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp TCTTCTGAGATCTGCTTTTTCAAAGTTTCAATGGGTTGCAGTGCCCCACCACCAGTTTGGGCGCAGAGTTaGGGCTCAGAGACTGAACCA +
Preference number: 5 (lower is better)
Translates to: SSEICFFKVSMGCSAPPPVWAQS*GSETEP
Trigger: TGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAAC...TGGTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAAAGCAGATCTCAGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGGTTTGGGCGCAGAGTTaGGGCTCAGAGACTGAACCA +
Preference number: 5 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWVWAQS*GSETEP
Trigger: TGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAAC...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGGTAGGGAGACCCTGCTaGGGTGGTGGAACATACTCT +
Preference number: 5 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWVGRPC*GGGTYS
Trigger: AGAGTATGTTCCACCACCCAAGCAGGGTCTCCCTAC...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGCTGAGGGCTCTTAGTTaGCCATCCACCCATTTCTGC +
Preference number: 5 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKLRALS*PSTHFC
Trigger: GCAGAAATGGGTGGATGGCAAACTAAGAGCCCTCAG...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp TGGGTCAAAACGAGGCCAGTGAGAAAAAGTAGGGAGACCCTGCTTGGGTGGTGGTACATCCTATTGCCCTaGCACCAACACCAACAAAAT +
Preference number: 5 (lower is better)
Translates to: WVKTRPVRKSRETLLGWWYILLP*HQHQQN
Trigger: ATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTA...CCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS CCA 90 bp AGAGAGCTGCAAGAAGGCTGGAGTAGTCCAAAGGGTACTGGACTTTaGGGCCACAGAATTGTTAAATTTTCTTCCTCCCTCCTATGTGCC +
Preference number: 5 (lower is better)
Translates to: RELQEGWSSPKGTGL*GHRIVKFSSSLLCA
Trigger: GGCACATAGGAGGGAGGAAGAAAATTTAACAATTCTGTGGCCCCAAAGTCCAGTACCCTTTGGACTACTCCAGCCTTCTTGCAGCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS-3UTR CAA 90 bp TCTCTGTTGGGACTGCAGGTTTTCTCCCTGGAGATTCACAATTACATGTTGTGGCAAAGTTTCAATGGGTaGCAGTGCCCCACCACCATG +
Preference number: 5 (lower is better)
Translates to: SLLGLQVFSLEIHNYMLWQSFNG*QCPTTM
Trigger: CATGGTGGTGGGGCACTGCAACCCATTGAAACTTTG...CCACAACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGGTTTTAGAAGAAGCTTaGTCTCCTGCTGGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKVLEEA*SPAGPA
Trigger: TGCTGGCCCAGCAGGAGACAAAGCTTCTTCTAAAAC...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp CCAAACATTGGTAGAAGAGTGCTTCAGGCTTGTGCCTCCACTGAATTTCCCCAGATTCATTCTGGGATATaGGAGGGGTGGTCACCCAAA +
Preference number: 5 (lower is better)
Translates to: PNIGRRVLQACASTEFPQIHSGI*EGWSPK
Trigger: TTTGGGTGACCACCCCTCCAATATCCCAGAATGAAT...CTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGCACTCTTCTACCAATGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGGTAGGGAGACCCTGCTaGGGTGGTGGAACATACTCT +
Preference number: 5 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVVGRPC*GGGTYS
Trigger: AGAGTATGTTCCACCACCCAAGCAGGGTCTCCCTAC...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGGAACACACCCTCCCCTaGCTTTCAATGACTGGAGAG +
Preference number: 5 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWEHTLP*LSMTGE
Trigger: CTCTCCAGTCATTGAAAGCAAGGGGAGGGTGTGTTC...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATATCTCTATTATGAACTaGGTGCCGGAAGCAGGGACA +
Preference number: 5 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHISIMN*VPEAGT
Trigger: TGTCCCTGCTTCCGGCACCAAGTTCATAATAGAGAT...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp GGAAAGTACCATGATTCCAGGCCCCAGCTTCTCTGGAGGGATAGCGCTGAGGTTATCCAGTTTGAGTTCTaGGGGTTTAGTAAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: GKYHDSRPQLLWRDSAEVIQFEF*GFSKLF
Trigger: AAACAGCTTACTAAACCCCAAGAACTCAAACTGGAT...AACCTCAGCGCTATCCCTCCAGAGAAGCTGGGGCCTGGAATCATGGTACTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CAA 90 bp GGGATAGCGCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCCATTCATATCCAGTTaGAGTTCTTGGGGTTTAGTA +
Preference number: 5 (lower is better)
Translates to: GIALRFGRRVWAQRLNQIPFISS*SSWGLV
Trigger: TACTAAACCCCAAGAACTCAAACTGGATATGAATGG...GATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CAA 90 bp GCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGGCCAGCCATCACAGTTaGACTTCAATAAACTTGGTC +
Preference number: 5 (lower is better)
Translates to: AEVWAQSLGSETEPNPTKASHHS*TSINLV
Trigger: GACCAAGTTTATTGAAGTCAAACTGTGATGGCTGGC...CTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CAA 90 bp TCCTCCAACTCTTCAGGGGTTCTGTGCATCCCCATCTTCTTCCGGGTTGATTTTATGTGTCTTAGGATGTaGAGGGGTCATGTTTGTAGG +
Preference number: 5 (lower is better)
Translates to: SSNSSGVLCIPIFFRVDFMCLRM*RGHVCR
Trigger: CCTACAAACATGACCCCTCAACATCCTAAGACACAT...AAAATCAACCCGGAAGAAGATGGGGATGCACAGAACCCCTGAAGAGTTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CAA 90 bp TCTCTGTTGGGACTGCAGGTTTTCTCCCTGGAGATTCACAATTACATGTTGTGGGTTTTAGAAGAAGCTTaGTCTCCTGCTGGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: SLLGLQVFSLEIHNYMLWVLEEA*SPAGPA
Trigger: TGCTGGCCCAGCAGGAGACAAAGCTTCTTCTAAAAC...CCACAACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCGAACACACCCTCCCCTaGCTTTCAATGACTGGAGAG +
Preference number: 5 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPEHTLP*LSMTGE
Trigger: CTCTCCAGTCATTGAAAGCAAGGGGAGGGTGTGTTC...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATGAAAGGCAGATTCCTTaGTGCCAGATCCTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHERQIP*CQILSL
Trigger: AAGAGAAAGGATCTGGCACAAAGGAATCTGCCTTTC...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp GCTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGCATTATTGGACTCCTTaGCTTCCTCCCTTTAAGTCA +
Preference number: 5 (lower is better)
Translates to: AEVWAQSLGSETEPNPTKHYWTP*LPPFKS
Trigger: TGACTTAAAGGGAGGAAGCAAAGGAGTCCAATAATG...CTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS CCA 90 bp CTCCTAAGGTCAGGAAAAGGGTATTACAGTGCCTTTAGAAACTACTaGAAGCTCAGTGTGGCTGAAGCACGGAAGTCAAGAGGAATAGAG +
Preference number: 5 (lower is better)
Translates to: LLRSGKGYYSAFRNY*KLSVAEARKSRGIE
Trigger: CTCTATTCCTCTTGACTTCCGTGCTTCAGCCACACTGAGCTTCCAGTAGTTTCTAAAGGCACTGTAATACCCTTTTCCTGACCTTAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS-3UTR CAA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGAGGTCTTTGCTTGGTTaGATAGTAGGTCTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKRSLLG*IVGLWS
Trigger: AGACCACAGACCTACTATCAAACCAAGCAAAGACCT...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp CTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGCAGACTTAGGTCTTaGCTTGGTTTGATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: LRFGRRVWAQRLNQIQQRCRLRS*LGLIVG
Trigger: ACCTACTATCAAACCAAGCAAAGACCTAAGTCTGCA...TCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGTCTATGACCACAGCATaGACTAGGAGTAGGCTTAAG +
Preference number: 5 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKSMTTA*TRSRLK
Trigger: CTTAAGCCTACTCCTAGTCAATGCTGTGGTCATAGA...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp TGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCATTCTATGACCACAGCATaGACTAGGAGTAGGCTTAAG +
Preference number: 5 (lower is better)
Translates to: WAQSLGSETEPNPTKMSHSMTTA*TRSRLK
Trigger: CTTAAGCCTACTCCTAGTCAATGCTGTGGTCATAGA...ATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp TGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCATATGTGTCTTAGGATGTaGAGGGGTCATGTTTGTAGG +
Preference number: 5 (lower is better)
Translates to: WAQSLGSETEPNPTKMSHMCLRM*RGHVCR
Trigger: CCTACAAACATGACCCCTCAACATCCTAAGACACAT...ATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp CTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCATGTGAGATGGGTTTCCGTTTTAGAAGAAGCTTaGTCTCCTGCTGGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: LHPFILSLCVSLHVRWVSVLEEA*SPAGPA
Trigger: TGCTGGCCCAGCAGGAGACAAAGCTTCTTCTAAAAC...GGAAACCCATCTCACATGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CAA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCGTGGTCACCCAAACATaGGTAGAAGAGTGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPVVTQT*VEECFR
Trigger: CCTGAAGCACTCTTCTACCAATGTTTGGGTGACCAC...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGACTGTGATCCTTTTCTaGATCCTCTGGCATCCTCTC +
Preference number: 5 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWTVILF*ILWHPL
Trigger: GAGAGGATGCCAGAGGATCAAGAAAAGGATCACAGT...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGGGCATGTGTCCAGTCTaGCTTTGGGAAGTGTCTAGA +
Preference number: 5 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVGMCPV*LWEVSR
Trigger: TCTAGACACTTCCCAAAGCAAGACTGGACACATGCC...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTGGATAAACACAAGTTaGCCTCCTGGAAAGCGGACT +
Preference number: 5 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWWINTS*PPGKRT
Trigger: AGTCCGCTTTCCAGGAGGCAAACTTGTGTTTATCCA...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp TCCTCACCAGCAACGGAACAAAGCTGGACAGAGAATGACTTTGACGAGTTGAGATGCAGACTTAGGTCTTaGCTTGGTTTGATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: SSPATEQSWTENDFDELRCRLRS*LGLIVG
Trigger: ACCTACTATCAAACCAAGCAAAGACCTAAGTCTGCA...TCTCAACTCGTCAAAGTCATTCTCTGTCCAGCTTTGTTCCGTTGCTGGTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CAA 90 bp AGTCCCCATCATGGGGATCAGGTTTGGATAAACACAAGTTTGCCTCCTGGAAAGTGCAGACTTAGGTCTTaGCTTGGTTTGATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: SPHHGDQVWINTSLPPGKCRLRS*LGLIVG
Trigger: ACCTACTATCAAACCAAGCAAAGACCTAAGTCTGCA...CTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp ATGGCTGTCATGAACACGATCTGCAGCAAGTCTATGACCACAGCATTGACTAGGTGCAGACTTAGGTCTTaGCTTGGTTTGATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: MAVMNTICSKSMTTALTRCRLRS*LGLIVG
Trigger: ACCTACTATCAAACCAAGCAAAGACCTAAGTCTGCA...CCTAGTCAATGCTGTGGTCATAGACTTGCTGCAGATCGTGTTCATGACAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGCATGTGCAATTCTTCTaGTGGCATTTTCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKHVQFF*WHFLCW
Trigger: CCAACAGAGAAAATGCCACAAGAAGAATTGCACATG...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp ATGGCTGTCATGAACACGATCTGCAGCAAGTCTATGACCACAGCATTGACTAGGCATGTGCAATTCTTCTaGTGGCATTTTCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: MAVMNTICSKSMTTALTRHVQFF*WHFLCW
Trigger: CCAACAGAGAAAATGCCACAAGAAGAATTGCACATG...CCTAGTCAATGCTGTGGTCATAGACTTGCTGCAGATCGTGTTCATGACAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp TGCTTTTTAATAGATGATGATGTTCCAAGCAGCCAGCCATCACAGTTTGACTTCCAAAGTTTCAATGGGTaGCAGTGCCCCACCACCATG +
Preference number: 5 (lower is better)
Translates to: CFLIDDDVPSSQPSQFDFQSFNG*QCPTTM
Trigger: CATGGTGGTGGGGCACTGCAACCCATTGAAACTTTG...GAAGTCAAACTGTGATGGCTGGCTGCTTGGAACATCATCATCTATTAAAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp TCTCTGTTGGGACTGCAGGTTTTCTCCCTGGAGATTCACAATTACATGTTGTGGTGTCACTGTCCCTCTTaGGGGTCTACATGTATCTTT +
Preference number: 5 (lower is better)
Translates to: SLLGLQVFSLEIHNYMLWCHCPS*GSTCIF
Trigger: AAAGATACATGTAGACCCCAAAGAGGGACAGTGACA...CCACAACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp TCTTCTGAGATCTGCTTTTTCAAAGTTTCAATGGGTTGCAGTGCCCCACCACCATGTCACTGTCCCTCTTaGGGGTCTACATGTATCTTT +
Preference number: 5 (lower is better)
Translates to: SSEICFFKVSMGCSAPPPCHCPS*GSTCIF
Trigger: AAAGATACATGTAGACCCCAAAGAGGGACAGTGACA...TGGTGGTGGGGCACTGCAACCCATTGAAACTTTGAAAAAGCAGATCTCAGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCGAGACTGACTCACAATaGGCTCTCGTGTTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPETDSQ*ALVLFV
Trigger: CACAAACAACACGAGAGCCAATTGTGAGTCAGTCTC...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATAAGCCCATTGAGCTCTTaGGTTATGGGATGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LVRQVPVKGETQLLCNEISPLSS*VMGWAA
Trigger: AGCTGCCCATCCCATAACCAAAGAGCTCAATGGGCT...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGATTCATTCTGGGATATaGGAGGGGTGGTCACCCAAA +
Preference number: 5 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVIHSGI*EGWSPK
Trigger: TTTGGGTGACCACCCCTCCAATATCCCAGAATGAAT...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp CTGCTGAAAGCCCATCTCTGCTTTTCCAAATTGGCCATTCATGGAGAGGCAAAGCACTCCAAAGGCTTTTaGATATGGGATGAAACCGAT +
Preference number: 5 (lower is better)
Translates to: LLKAHLCFSKLAIHGEAKHSKGF*IWDETD
Trigger: ATCGGTTTCATCCCATATCAAAAAGCCTTTGGAGTG...CTTTGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAGATGGGCTTTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGGAAAGGCAGATTCCTTaGTGCCAGATCCTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWERQIP*CQILSL
Trigger: AAGAGAAAGGATCTGGCACAAAGGAATCTGCCTTTC...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp CTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGACCATTCATATCCAGTTaGAGTTCTTGGGGTTTAGTA +
Preference number: 5 (lower is better)
Translates to: LRFGRRVWAQRLNQIQQRPFISS*SSWGLV
Trigger: TACTAAACCCCAAGAACTCAAACTGGATATGAATGG...TCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CAA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGAGCCAGCCATCACAGTTaGACTTCAATAAACTTGGTC +
Preference number: 5 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGASHHS*TSINLV
Trigger: GACCAAGTTTATTGAAGTCAAACTGTGATGGCTGGC...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587139.5
CDS-3UTR CAA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCACAGCACCAATATCATaGAACATAGGCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPTAPIS*NIGQVQ
Trigger: CTGCACCTGGCCTATGTTCAATGATATTGGTGCTGT...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS GCA 90 bp TGCTCAAGTAGGAACCATCCAGTTCCACAGATGAACACTGGAGAGTaGTTTTTCTACTGGATACCTGTGGGTCTTGTTGGAAAGCAAATT +
Preference number: 5 (lower is better)
Translates to: CSSRNHPVPQMNTGE*FFYWIPVGLVGKQI
Trigger: AATTTGCTTTCCAACAAGACCCACAGGTATCCAGTAGAAAAAGCACTCTCCAGTGTTCATCTGTGGAACTGGATGGTTCCTACTTGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR CAA 90 bp GATTTTGCAGCAGCTGGTACCAGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCAAGGTCTTTGCTTGGTTaGATAGTAGGTCTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: DFAAAGTSCSFPCLVLPSRSLLG*IVGLWS
Trigger: AGACCACAGACCTACTATCAAACCAAGCAAAGACCT...TGAAGGAAGCACTAAACATGGAAAGGAACAACTGGTACCAGCTGCTGCAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CAA 90 bp TCTCGTGTTGTTTGTGATGGCAGGGGCACCAACTCCAACTTCAGAATTAAAGGATGCAGACTTAGGTCTTaGCTTGGTTTGATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: SRVVCDGRGTNSNFRIKGCRLRS*LGLIVG
Trigger: ACCTACTATCAAACCAAGCAAAGACCTAAGTCTGCA...TCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp TCTCTGTTGGGACTGCAGGTTTTCTCCCTGGAGATTCACAATTACATGTTGTGGTGCAGACTTAGGTCTTaGCTTGGTTTGATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: SLLGLQVFSLEIHNYMLWCRLRS*LGLIVG
Trigger: ACCTACTATCAAACCAAGCAAAGACCTAAGTCTGCA...CCACAACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp GATTTTGCAGCAGCTGGTACCAGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCATCTATGACCACAGCATaGACTAGGAGTAGGCTTAAG +
Preference number: 5 (lower is better)
Translates to: DFAAAGTSCSFPCLVLPSSMTTA*TRSRLK
Trigger: CTTAAGCCTACTCCTAGTCAATGCTGTGGTCATAGA...TGAAGGAAGCACTAAACATGGAAAGGAACAACTGGTACCAGCTGCTGCAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CAA 90 bp AATGCTATAAGGGATTCTGAAGCTGAATCCTGGACTGCAGACTTAGGTCTTTGCTCTATGACCACAGCATaGACTAGGAGTAGGCTTAAG +
Preference number: 5 (lower is better)
Translates to: NAIRDSEAESWTADLGLCSMTTA*TRSRLK
Trigger: CTTAAGCCTACTCCTAGTCAATGCTGTGGTCATAGA...GCAAAGACCTAAGTCTGCAGTCCAGGATTCAGCTTCAGAATCCCTTATAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp CTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCATGTGAGATGGGTTTCCATGTGTCTTAGGATGTaGAGGGGTCATGTTTGTAGG +
Preference number: 5 (lower is better)
Translates to: LHPFILSLCVSLHVRWVSMCLRM*RGHVCR
Trigger: CCTACAAACATGACCCCTCAACATCCTAAGACACAT...GGAAACCCATCTCACATGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CAA 90 bp TCAGAGACTGAACCAAATCCAACAAAGATGTCTCATACCTTAATAGGTTCCTTCCAAAGTTTCAATGGGTaGCAGTGCCCCACCACCATG +
Preference number: 5 (lower is better)
Translates to: SETEPNPTKMSHTLIGSFQSFNG*QCPTTM
Trigger: CATGGTGGTGGGGCACTGCAACCCATTGAAACTTTG...GAAGGAACCTATTAAGGTATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR CAA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCTGTCACTGTCCCTCTTaGGGGTCTACATGTATCTTT +
Preference number: 5 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPCHCPS*GSTCIF
Trigger: AAAGATACATGTAGACCCCAAAGAGGGACAGTGACA...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATAGTGGTCACCCAAACATaGGTAGAAGAGTGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LVRQVPVKGETQLLCNEIVVTQT*VEECFR
Trigger: CCTGAAGCACTCTTCTACCAATGTTTGGGTGACCAC...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp TGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCATATCCAGTTTGAGTTCTaGGGGTTTAGTAAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: WAQSLGSETEPNPTKMSHIQFEF*GFSKLF
Trigger: AAACAGCTTACTAAACCCCAAGAACTCAAACTGGAT...ATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CAA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTTGACTTCAATAAACTaGGTCCAGAGTCACTGCCAT +
Preference number: 5 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWLTSIN*VQSHCH
Trigger: ATGGCAGTGACTCTGGACCAAGTTTATTGAAGTCAA...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587139.5
CDS-3UTR CAA 90 bp CTGAGGTTTGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATTTATTTTATCTGTTTaGGTCAAAGGTCTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LRFGRRVWAQRLNQIQQRFILSV*VKGLKA
Trigger: GGCCTTCAGACCTTTGACCAAAACAGATAAAATAAA...TCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR CAA 90 bp TTCTCTGTATTTCCTGAATCTGAATGTTGGCCTGCCTTGCTAGATTGGGGAAGTAGCAGCTGGTACCAGTaGTTCCTTTCCATGTTTAGT +
Preference number: 5 (lower is better)
Translates to: FSVFPESECWPALLDWGSSSWYQ*FLSMFS
Trigger: ACTAAACATGGAAAGGAACAACTGGTACCAGCTGCT...ACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAGATTCAGGAAATACAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CAA 90 bp TCTCACTCCAGAGTTTTAAGGACACTGGAGTCTGGAATGGGTGACTGTGGGCATTATAGGTACTTGAAATaGCAAAACTCTCTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: SHSRVLRTLESGMGDCGHYRYLK*QNSLFP
Trigger: TGGGAAGAGAGAGTTTTGCAATTTCAAGTACCTATA...ATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCTGGAGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS TCA 90 bp TGTAGCCTAGCATTTTGTCTAGGAGAACAATATGAAGAAATGATTTaGAAGGAAGCAGATCTTTGTGGAGATTCCTGGGCGGGAGGTGGT +
Preference number: 5 (lower is better)
Translates to: CSLAFCLGEQYEEMI*KEADLCGDSWAGGG
Trigger: ACCACCTCCCGCCCAGGAATCTCCACAAAGATCTGCTTCCTTTCAAATCATTTCTTCATATTGTTCTCCTAGACAAAATGCTAGGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS CCA 90 bp TACCTTGGTCCAGAGTCACTGCCATTCATATCCAGTTTGAGTTCTTaGGGTTTAGTAAGCTGTTTTTCAGCAACCAGTTCTCTCGACTTA +
Preference number: 5 (lower is better)
Translates to: YLGPESLPFISSLSS*GLVSCFSATSSLDL
Trigger: TAAGTCGAGAGAACTGGTTGCTGAAAAACAGCTTACTAAACCCCAAGAACTCAAACTGGATATGAATGGCAGTGACTCTGGACCAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599493.1
CDS-3UTR CAA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCCATGTGCAATTCTTCTaGTGGCATTTTCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPHVQFF*WHFLCW
Trigger: CCAACAGAGAAAATGCCACAAGAAGAATTGCACATG...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp TCTCTGTTGGGACTGCAGGTTTTCTCCCTGGAGATTCACAATTACATGTTGTGGGCCAGCCATCACAGTTaGACTTCAATAAACAATTGT +
Preference number: 5 (lower is better)
Translates to: SLLGLQVFSLEIHNYMLWASHHS*TSINNC
Trigger: ACAATTGTTTATTGAAGTCAAACTGTGATGGCTGGC...CCACAACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTCCCAACAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592611.5
CDS-3UTR CAA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTAGTAGAGATGGTTCTTaGGGGCCACGAGCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSISRDGS*GPRAEH
Trigger: GTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTACT...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp CCTCCAGATCAAATAAAATTCCCAAGTAATACACATCTGGGAACACACCCTCCCCACTCCAAAGGCTTTTaGATATGGGATGAAACCGAT +
Preference number: 5 (lower is better)
Translates to: PPDQIKFPSNTHLGTHPPHSKGF*IWDETD
Trigger: ATCGGTTTCATCCCATATCAAAAAGCCTTTGGAGTG...GGGAGGGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATACTCTGCTTTTCCAAATaGGCCATTCATGGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: LVRQVPVKGETQLLCNEILCFSK*AIHGEA
Trigger: TGCCTCTCCATGAATGGCCAATTTGGAAAAGCAGAG...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp TTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGTAGAAGAGTGTACATCCTATTGCCCTaGCACCAACACCAACAAAAT +
Preference number: 5 (lower is better)
Translates to: LFILGYWRGGHPNIGRRVYILLP*HQHQQN
Trigger: ATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTA...CACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGATCCAGTTTGAGTTCTaGGGGTTTAGTAAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWIQFEF*GFSKLF
Trigger: AAACAGCTTACTAAACCCCAAGAACTCAAACTGGAT...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587139.5
CDS-3UTR CAA 90 bp GGGATTGTTCTTATTCATTCTGGGATATTGGAGGGGTGGTCACCCAAACATTGGCCATTCATATCCAGTTaGAGTTCTTGGGGTTTAGTA +
Preference number: 5 (lower is better)
Translates to: GIVLIHSGILEGWSPKHWPFISS*SSWGLV
Trigger: TACTAAACCCCAAGAACTCAAACTGGATATGAATGG...CCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587139.5
CDS-3UTR CAA 90 bp TGGGCGCAGAGTTTGGGCTCAGAGACTGAACCAAATCCAACAAAGATGTCTCATCCCTTTAAGTCATTCTaGGTATGTCTTTCTGTGTTT +
Preference number: 5 (lower is better)
Translates to: WAQSLGSETEPNPTKMSHPFKSF*VCLSVF
Trigger: AAACACAGAAAGACATACCAAGAATGACTTAAAGGG...ATGAGACATCTTTGTTGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS-3UTR CAA 90 bp TCCTCACCAGCAACGGAACAAAGCTGGACAGAGAATGACTTTGACGAGTTGAGAAGAGTGTTTTCCAACTaGGTTCTTGGAAACTCTAAA +
Preference number: 5 (lower is better)
Translates to: SSPATEQSWTENDFDELRRVFSN*VLGNSK
Trigger: TTTAGAGTTTCCAAGAACCAAGTTGGAAAACACTCT...TCTCAACTCGTCAAAGTCATTCTCTGTCCAGCTTTGTTCCGTTGCTGGTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS TCA 90 bp ATTTGCTTGGTGTTTCAGGATACTACACTTCTGAAAGGTCCCAAATaGCTTCTTGCCTTTGCAACTTCCATCTCACCATTGCAACCTACA +
Preference number: 5 (lower is better)
Translates to: ICLVFQDTTLLKGPK*LLAFATSISPLQPT
Trigger: TGTAGGTTGCAATGGTGAGATGGAAGTTGCAAAGGCAAGAAGTCATTTGGGACCTTTCAGAAGTGTAGTATCCTGAAACACCAAGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590456.5
CDS TCA 90 bp CACCAGCAACGGAACAAAGCTGGACAGAGAATGACTTTGACGAGTTaGGAGAAGGATTCAGATGATCAAACTACTCTGAGCAATTGTAAT +
Preference number: 5 (lower is better)
Translates to: HQQRNKAGQRMTLTS*EKDSDDQTTLSNCN
Trigger: ATTACAATTGCTCAGAGTAGTTTGATCATCTGAATCCTTCTCTCAACTCGTCAAAGTCATTCTCTGTCCAGCTTTGTTCCGTTGCTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS TCA 90 bp ATTTGCTTGGTGTTTCAGGATACTACACTTCTGAAAGGTCCCAAATaGTTGCCTTTGCAACTTCCATCTCACCATTGCAACCTACACTCT +
Preference number: 5 (lower is better)
Translates to: ICLVFQDTTLLKGPK*LPLQLPSHHCNLHS
Trigger: AGAGTGTAGGTTGCAATGGTGAGATGGAAGTTGCAAAGGCAATCATTTGGGACCTTTCAGAAGTGTAGTATCCTGAAACACCAAGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591911.1
CDS-3UTR CAA 90 bp AAATATATCTTCCAGAATCTGATTCTCCTCCAACTCTTCAGGGGTTCTGTGCATAGGTCTTTGCTTGGTTaGATAGTAGGTCTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: KYIFQNLILLQLFRGSVHRSLLG*IVGLWS
Trigger: AGACCACAGACCTACTATCAAACCAAGCAAAGACCT...ATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CAA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATATCTATGACCACAGCATaGACTAGGAGTAGGCTTAAG +
Preference number: 5 (lower is better)
Translates to: LVRQVPVKGETQLLCNEISMTTA*TRSRLK
Trigger: CTTAAGCCTACTCCTAGTCAATGCTGTGGTCATAGA...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp TGCTTTTTAATAGATGATGATGTTCCAAGCAGCCAGCCATCACAGTTTGACTTCTCTATGACCACAGCATaGACTAGGAGTAGGCTTAAG +
Preference number: 5 (lower is better)
Translates to: CFLIDDDVPSSQPSQFDFSMTTA*TRSRLK
Trigger: CTTAAGCCTACTCCTAGTCAATGCTGTGGTCATAGA...GAAGTCAAACTGTGATGGCTGGCTGCTTGGAACATCATCATCTATTAAAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590617.5
ENST00000592611.5
CDS-3UTR CAA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATAATGTGTCTTAGGATGTaGAGGGGTCATGTTTGTAGG +
Preference number: 5 (lower is better)
Translates to: LVRQVPVKGETQLLCNEIMCLRM*RGHVCR
Trigger: CCTACAAACATGACCCCTCAACATCCTAAGACACAT...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp TTGTCTGTAAAGGATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGACAAAGTTTCAATGGGTaGCAGTGCCCCACCACCATG +
Preference number: 5 (lower is better)
Translates to: LSVKDFISPSLMKLSLAGQSFNG*QCPTTM
Trigger: CATGGTGGTGGGGCACTGCAACCCATTGAAACTTTG...TCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTACAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CAA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTCAAAGTTTCAATGGGTaGCAGTGCCCCACCACCATG +
Preference number: 5 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSIQSFNG*QCPTTM
Trigger: CATGGTGGTGGGGCACTGCAACCCATTGAAACTTTG...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp GTATTTCCTGAATCTGAATGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTTTTCCAACTTGGTTCTaGGAAACTCTAAAAAGCAGA +
Preference number: 5 (lower is better)
Translates to: VFPESECWPALLDWGSSPFPTWF*ETLKSR
Trigger: TCTGCTTTTTAGAGTTTCCAAGAACCAAGTTGGAAA...AGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAGATTCAGGAAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS TCA 90 bp GAGGGCAGTGGGAAACTAACTAATGCTTTAATCCAGGTTGTGACATaGTATAATGACCTGGTGGCTTTATGGAGAATAATAGGTTACCCT +
Preference number: 5 (lower is better)
Translates to: EGSGKLTNALIQVVT*YNDLVALWRIIGYP
Trigger: AGGGTAACCTATTATTCTCCATAAAGCCACCAGGTCATTATATCATGTCACAACCTGGATTAAAGCATTAGTTAGTTTCCCACTGCCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS-3UTR CAA 90 bp AAATATATCTTCCAGAATCTGATTCTCCTCCAACTCTTCAGGGGTTCTGTGCATCATGTGCAATTCTTCTaGTGGCATTTTCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: KYIFQNLILLQLFRGSVHHVQFF*WHFLCW
Trigger: CCAACAGAGAAAATGCCACAAGAAGAATTGCACATG...ATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CAA 90 bp CTAGTGAGACAAGTCCCCGTGAAAGGAGAGACACAATTACTTTGCAATGAAATACATGTGCAATTCTTCTaGTGGCATTTTCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: LVRQVPVKGETQLLCNEIHVQFF*WHFLCW
Trigger: CCAACAGAGAAAATGCCACAAGAAGAATTGCACATG...TATTTCATTGCAAAGTAATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280020.10
ENST00000587139.5
ENST00000591619.5
CDS-3UTR CAA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTGTTTTAGAAGAAGCTTaGTCTCCTGCTGGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSIVLEEA*SPAGPA
Trigger: TGCTGGCCCAGCAGGAGACAAAGCTTCTTCTAAAAC...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp AAATATATCTTCCAGAATCTGATTCTCCTCCAACTCTTCAGGGGTTCTGTGCATTTGACTTCAATAAACTaGGTCCAGAGTCACTGCCAT +
Preference number: 5 (lower is better)
Translates to: KYIFQNLILLQLFRGSVHLTSIN*VQSHCH
Trigger: ATGGCAGTGACTCTGGACCAAGTTTATTGAAGTCAA...ATGCACAGAACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS-3UTR CAA 90 bp TCCTTTTTAGTTGACAAGTATGTGCTTAGCAGCCTAACAGCAGCAGCAGAACAGTGCCCAAATTTCTTCTaGTCCTTTTTAGTTGACAAG +
Preference number: 5 (lower is better)
Translates to: SFLVDKYVLSSLTAAAEQCPNFF*SFLVDK
Trigger: CTTGTCAACTAAAAAGGACAAGAAGAAATTTGGGCA...CTGTTCTGCTGCTGCTGTTAGGCTGCTAAGCACATACTTGTCAACTAAAAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592521.5
CDS TCA 90 bp AACACTCTACCTGTGTTAGCTCATTTAACCTTCACAATAACTTCATaGGGTAGGTTCTGCAATGATCCCCATTTAAAGATGAGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: NTLPVLAHLTFTITS*GRFCNDPHLKMSEA
Trigger: TGCCTCACTCATCTTTAAATGGGGATCATTGCAGAACCTACCTCATGAAGTTATTGTGAAGGTTAAATGAGCTAACACAGGTAGAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS-3UTR CAA 90 bp TCAAATGAAAAATATATCTTCCAGAATCTGATTCTCCTCCAACTCTTCAGGGGTAGGTCTTTGCTTGGTTaGATAGTAGGTCTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: SNEKYIFQNLILLQLFRGRSLLG*IVGLWS
Trigger: AGACCACAGACCTACTATCAAACCAAGCAAAGACCT...ACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATATTTTTCATTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590617.5
CDS TCA 90 bp TATAATGACCTGGTGGCTTTATGGAGAATAATAGGTTACCCTTGCTaGGTGCTTATTATATTCTATGCTGAACACTCTACCTGTGTTAGC +
Preference number: 5 (lower is better)
Translates to: YNDLVALWRIIGYPC*VLIIFYAEHSTCVS
Trigger: GCTAACACAGGTAGAGTGTTCAGCATAGAATATAATAAGCACTCAGCAAGGGTAACCTATTATTCTCCATAAAGCCACCAGGTCATTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS TCA 90 bp ACAAGTGGTAAGGCTGGGTTCTCCAAAGTGAATATATGTTTTCTTTaGACACTTTACATTCTAATAGGGCAGACAGTGCACAGAGCAATA +
Preference number: 5 (lower is better)
Translates to: TSGKAGFSKVNICFL*TLYILIGQTVHRAI
Trigger: TATTGCTCTGTGCACTGTCTGCCCTATTAGAATGTAAAGTGTTCAAAGAAAACATATATTCACTTTGGAGAACCCAGCCTTACCACTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS-3UTR CAA 90 bp AGTCTGGTGGTGAGAAAATCTCTCAGCATTTGCTTGTCTGTAAAGGATTTTATTCATGTGCAATTCTTCTaGTGGCATTTTCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: SLVVRKSLSICLSVKDFIHVQFF*WHFLCW
Trigger: CCAACAGAGAAAATGCCACAAGAAGAATTGCACATG...AATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTCTCACCACCAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CAA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTATGTGTCTTAGGATGTaGAGGGGTCATGTTTGTAGG +
Preference number: 5 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSIMCLRM*RGHVCR
Trigger: CCTACAAACATGACCCCTCAACATCCTAAGACACAT...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp ATATACAAATTTACATCCTATTGCCCTTGCACCAACACCAACAAAATGTCCATTTCATGGGGATCAGGTTaGGATAAACACAAGTTTGCC +
Preference number: 5 (lower is better)
Translates to: IYKFTSYCPCTNTNKMSISWGSG*DKHKFA
Trigger: GGCAAACTTGTGTTTATCCAAACCTGATCCCCATGA...AATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280020.10
ENST00000591619.5
CDS-3UTR CAA 90 bp AGTCTGGTGGTGAGAAAATCTCTCAGCATTTGCTTGTCTGTAAAGGATTTTATTCTCCATCCTTTTATTTaGAGCCTATGTGTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: SLVVRKSLSICLSVKDFILHPFI*SLCVSL
Trigger: CAGAGACACACATAGGCTCAAAATAAAAGGATGGAG...AATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTCTCACCACCAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CAA 90 bp TTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTAGTTTCTTCCTAGCCTaGATGGTCTTTACATTTTGG +
Preference number: 5 (lower is better)
Translates to: FLHFNFGESDNYVSWSCSSFFLA*MVFTFW
Trigger: CCAAAATGTAAAGACCATCAAGGCTAGGAAGAAACT...AGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS-3UTR CAA 90 bp AGTCTGGTGGTGAGAAAATCTCTCAGCATTTGCTTGTCTGTAAAGGATTTTATTTTTTCTTTAAGAATGTaGAATATTGGCCCCCACTCT +
Preference number: 5 (lower is better)
Translates to: SLVVRKSLSICLSVKDFIFSLRM*NIGPHS
Trigger: AGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAA...AATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTCTCACCACCAGACT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS CCA 72 bp CCTTCTGGATCCTCCGTGTTCCAAGGACCTCCCTCTTaGCACTCCCTCTGGCTCCACTGGACACCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: PSGSSVFQGPPS*HSLWLHWTPSS
Trigger: TGAGGAGGGTGTCCAGTGGAGCCAGAGGGAGTGCCAAGAGGGAGGTCCTTGGAACACGGAGGATCCAGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS CCA 72 bp GGTGCCAAGGAGGTGTCAGTTAAGGCTGCTCAGCTGTaGCCTGCAAGGAAGAAGGGAGGGAGAGGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: GAKEVSVKAAQL*PARKKGGRGQL
Trigger: GAGCTGGCCTCTCCCTCCCTTCTTCCTTGCAGGCCACAGCTGAGCAGCCTTAACTGACACCTCCTTGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS CAA 90 bp ACGGGCCTAGGGCATCCTGGAAGACGTCAGGCCATGGGCCATTGTTaGTGTGCTGGTGCCAAGGAGGTGTCAGTTAAGGCTGCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: TGLGHPGRRQAMGHC*CAGAKEVSVKAAQL
Trigger: CAGCTGAGCAGCCTTAACTGACACCTCCTTGGCACCAGCACACAAACAATGGCCCATGGCCTGACGTCTTCCAGGATGCCCTAGGCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS TCA 72 bp GAGGGAGAGGCCAGCTCTGATGTCCTGGTCAGATCTTaGACAGGGCCTGTCCTCTGGCCAACCACCTCTTCT +
Preference number: 6 (lower is better)
Translates to: EGEASSDVLVRS*TGPVLWPTTSS
Trigger: AGAAGAGGTGGTTGGCCAGAGGACAGGCCCTGTTCAAGATCTGACCAGGACATCAGAGCTGGCCTCTCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS CAA 72 bp GGGCATCCTGGAAGACGTCAGGCCATGGGCCATTGTTaGTGTGCTGGTGCCAAGGAGGTGTCAGTTAAGGCT +
Preference number: 6 (lower is better)
Translates to: GHPGRRQAMGHC*CAGAKEVSVKA
Trigger: AGCCTTAACTGACACCTCCTTGGCACCAGCACACAAACAATGGCCCATGGCCTGACGTCTTCCAGGATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS GCA 72 bp AAGAATCAAGGAGGGCAAACACCACAGTCTTACAGCTaGAGAACAGGTGAAGGGCACGGGCCTAGGGCATCC +
Preference number: 6 (lower is better)
Translates to: KNQGGQTPQSYS*RTGEGHGPRAS
Trigger: GGATGCCCTAGGCCCGTGCCCTTCACCTGTTCTGCAGCTGTAAGACTGTGGTGTTTGCCCTCCTTGATTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS CCA 72 bp ACAAATGCCAACGCTGCTTTCTACTCCTGGGCCTTCTaGATCCTCCGTGTTCCAAGGACCTCCCTCTTGGCA +
Preference number: 6 (lower is better)
Translates to: TNANAAFYSWAF*ILRVPRTSLLA
Trigger: TGCCAAGAGGGAGGTCCTTGGAACACGGAGGATCCAGAAGGCCCAGGAGTAGAAAGCAGCGTTGGCATTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS CCA 72 bp GAAAAGTCACATAGGCAGGAAACAGCAGCATGTCCTTaGGAGACGGCCAAGAGTTGTGAGCTGCAGAGGGGA +
Preference number: 6 (lower is better)
Translates to: EKSHRQETAACP*ETAKSCELQRG
Trigger: TCCCCTCTGCAGCTCACAACTCTTGGCCGTCTCCCAAGGACATGCTGCTGTTTCCTGCCTATGTGACTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS CCA 72 bp CAAAGAATGGGGAGAAGAACAGGGTGGGGCAGTACCTaGAAGAATCAAGGAGGGCAAACACCACAGTCTTAC +
Preference number: 6 (lower is better)
Translates to: QRMGRRTGWGST*KNQGGQTPQSY
Trigger: GTAAGACTGTGGTGTTTGCCCTCCTTGATTCTTCCAGGTACTGCCCCACCCTGTTCTTCTCCCCATTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS TCA 72 bp GAAGGCCGTATCAGTTCTCCCAAAGGGTACGCCCAATaGCCCTTTACAAATTCACCTCAGCATGAAGGTCTG +
Preference number: 6 (lower is better)
Translates to: EGRISSPKGYAQ*PFTNSPQHEGL
Trigger: CAGACCTTCATGCTGAGGTGAATTTGTAAAGGGTCATTGGGCGTACCCTTTGGGAGAACTGATACGGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590456.5
ENST00000591911.1
CDS GCA 72 bp CAGTGGGCCATATCACCAAGAGCCTTGTGCAGTATGTaGAGAAGTACAAACACAGAGGGCAGTGGGAAACTA +
Preference number: 6 (lower is better)
Translates to: QWAISPRALCSM*RSTNTEGSGKL
Trigger: TAGTTTCCCACTGCCCTCTGTGTTTGTACTTCTGCACATACTGCACAAGGCTCTTGGTGATATGGCCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS GCA 72 bp CAACCACCTCTTCTACTTTCTTACAAATGCCAACGCTaGTTTCTACTCCTGGGCCTTCTGGATCCTCCGTGT +
Preference number: 6 (lower is better)
Translates to: QPPLLLSYKCQR*FLLLGLLDPPC
Trigger: ACACGGAGGATCCAGAAGGCCCAGGAGTAGAAAGCAGCGTTGGCATTTGTAAGAAAGTAGAAGAGGTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS CCA 72 bp AATCTCAGCACTCAAAGAATGGGGAGAAGAACAGGGTaGGGCAGTACCTGGAAGAATCAAGGAGGGCAAACA +
Preference number: 6 (lower is better)
Translates to: NLSTQRMGRRTG*GSTWKNQGGQT
Trigger: TGTTTGCCCTCCTTGATTCTTCCAGGTACTGCCCCACCCTGTTCTTCTCCCCATTCTTTGAGTGCTGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS GCA 72 bp AGGAACCATCCAGTTCCACAGATGAACACTGGAGAGTaGTTTTTCTACTGGATACCTGTGGGTCTTGTTGGA +
Preference number: 6 (lower is better)
Translates to: RNHPVPQMNTGE*FFYWIPVGLVG
Trigger: TCCAACAAGACCCACAGGTATCCAGTAGAAAAAGCACTCTCCAGTGTTCATCTGTGGAACTGGATGGTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS CCA 72 bp CAAGAAGGCTGGAGTAGTCCAAAGGGTACTGGACTTTaGGGCCACAGAATTGTTAAATTTTCTTCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: QEGWSSPKGTGL*GHRIVKFSSSL
Trigger: GAGGGAGGAAGAAAATTTAACAATTCTGTGGCCCCAAAGTCCAGTACCCTTTGGACTACTCCAGCCTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS CCA 72 bp CAAGGTCTGGAAAGATTCATCCAAGATAGAGGGACCTaGAAAAGTCACATAGGCAGGAAACAGCAGCATGTC +
Preference number: 6 (lower is better)
Translates to: QGLERFIQDRGT*KSHIGRKQQHV
Trigger: GACATGCTGCTGTTTCCTGCCTATGTGACTTTTCCAGGTCCCTCTATCTTGGATGAATCTTTCCAGACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS CCA 72 bp CAGACAGTGCACAGAGCAATATGGGACAGATTGAGGTaGGCTATAACAAAGGCTCTACAGAGTACTATGGGA +
Preference number: 6 (lower is better)
Translates to: QTVHRAIWDRLR*AITKALQSTMG
Trigger: TCCCATAGTACTCTGTAGAGCCTTTGTTATAGCCCACCTCAATCTGTCCCATATTGCTCTGTGCACTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS GCA 72 bp GCTGATGTTGCTGGTCCAGGGAACATACTTACGGTATaGGTATCAATCATCTCTAAGAACCCTCTTTCACAC +
Preference number: 6 (lower is better)
Translates to: ADVAGPGNILTV*VSIISKNPLSH
Trigger: GTGTGAAAGAGGGTTCTTAGAGATGATTGATACGCATACCGTAAGTATGTTCCCTGGACCAGCAACATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586135.1
ENST00000590456.5
CDS CCA 72 bp TCAGGAAAAGGGTATTACAGTGCCTTTAGAAACTACTaGAAGCTCAGTGTGGCTGAAGCACGGAAGTCAAGA +
Preference number: 6 (lower is better)
Translates to: SGKGYYSAFRNY*KLSVAEARKSR
Trigger: TCTTGACTTCCGTGCTTCAGCCACACTGAGCTTCCAGTAGTTTCTAAAGGCACTGTAATACCCTTTTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS TCA 72 bp CGAGTTGAGAGAAGGATTCAGATGATCAAACTACTCTaGGCAATTGTAATCCAGTCGAGACTGGTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: RVERRIQMIKLL*AIVIQSRLVKL
Trigger: CAGCTTCACCAGTCTCGACTGGATTACAATTGCTCAGAGTAGTTTGATCATCTGAATCCTTCTCTCAACTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS TCA 72 bp CGGAACAAAGCTGGACAGAGAATGACTTTGACGAGTTaGGAGAAGGATTCAGATGATCAAACTACTCTGAGC +
Preference number: 6 (lower is better)
Translates to: RNKAGQRMTLTS*EKDSDDQTTLS
Trigger: GCTCAGAGTAGTTTGATCATCTGAATCCTTCTCTCAACTCGTCAAAGTCATTCTCTGTCCAGCTTTGTTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586501.1
CDS GCA 72 bp TACACTTCTGAAAGGTCCCAAATGACTTCTTGCCTTTaGAACTTCCATCTCACCATTGCAACCTACACTCTC +
Preference number: 6 (lower is better)
Translates to: YTSERSQMTSCL*NFHLTIATYTL
Trigger: GAGAGTGTAGGTTGCAATGGTGAGATGGAAGTTGCAAAGGCAAGAAGTCATTTGGGACCTTTCAGAAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590456.5
CDS CCA 72 bp TACATTCTAATAGGGCAGACAGTGCACAGAGCAATATaGGACAGATTGAGGTGGGCTATAACAAAGGCTCTA +
Preference number: 6 (lower is better)
Translates to: YILIGQTVHRAI*DRLRWAITKAL
Trigger: TAGAGCCTTTGTTATAGCCCACCTCAATCTGTCCCATATTGCTCTGTGCACTGTCTGCCCTATTAGAATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS CAA 90 bp TTACCTTGGTCCAGAGTCACTGCCATTCATATCCAGTTTGAGTTCTaGGGGTTTAGTAAGCTGTTTTTCAGCAACCAGTTCTCTCGACTT +
Preference number: 6 (lower is better)
Translates to: LPWSRVTAIHIQFEF*GFSKLFFSNQFSRL
Trigger: AAGTCGAGAGAACTGGTTGCTGAAAAACAGCTTACTAAACCCCAAGAACTCAAACTGGATATGAATGGCAGTGACTCTGGACCAAGGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599493.1
CDS CAA 90 bp CTTCAGGTTTACCTTGGTCCAGAGTCACTGCCATTCATATCCAGTTaGAGTTCTTGGGGTTTAGTAAGCTGTTTTTCAGCAACCAGTTCT +
Preference number: 6 (lower is better)
Translates to: LQVYLGPESLPFISS*SSWGLVSCFSATSS
Trigger: AGAACTGGTTGCTGAAAAACAGCTTACTAAACCCCAAGAACTCAAACTGGATATGAATGGCAGTGACTCTGGACCAAGGTAAACCTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599493.1
CDS TCA 72 bp GTACGCCCAATGACCCTTTACAAATTCACCTCAGCATaGAGGTCTGAATTTGCTTGGTGTTTCAGGATACTA +
Preference number: 6 (lower is better)
Translates to: VRPMTLYKFTSA*RSEFAWCFRIL
Trigger: TAGTATCCTGAAACACCAAGCAAATTCAGACCTTCATGCTGAGGTGAATTTGTAAAGGGTCATTGGGCGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586135.1
ENST00000590456.5
ENST00000591911.1
CDS TCA 72 bp GTGTTTCAGGATACTACACTTCTGAAAGGTCCCAAATaGTTGCCTTTGCAACTTCCATCTCACCATTGCAAC +
Preference number: 6 (lower is better)
Translates to: VFQDTTLLKGPK*LPLQLPSHHCN
Trigger: GTTGCAATGGTGAGATGGAAGTTGCAAAGGCAATCATTTGGGACCTTTCAGAAGTGTAGTATCCTGAAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591911.1
CDS CAA 72 bp TACCTTGGTCCAGAGTCACTGCCATTCATATCCAGTTaGAGTTCTTGGGGTTTAGTAAGCTGTTTTTCAGCA +
Preference number: 6 (lower is better)
Translates to: YLGPESLPFISS*SSWGLVSCFSA
Trigger: TGCTGAAAAACAGCTTACTAAACCCCAAGAACTCAAACTGGATATGAATGGCAGTGACTCTGGACCAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599493.1
CDS TCA 72 bp TCTGAATTTGCTTGGTGTTTCAGGATACTACACTTCTaGAAGGTCCCAAATGACTTCTTGCCTTTGCAACTT +
Preference number: 6 (lower is better)
Translates to: SEFAWCFRILHF*KVPNDFLPLQL
Trigger: AAGTTGCAAAGGCAAGAAGTCATTTGGGACCTTTCAGAAGTGTAGTATCCTGAAACACCAAGCAAATTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590456.5
CDS TCA 72 bp TCTGAATTTGCTTGGTGTTTCAGGATACTACACTTCTaGAAGGTCCCAAATGACTTCCTTTGCAACTTCCAT +
Preference number: 6 (lower is better)
Translates to: SEFAWCFRILHF*KVPNDFLCNFH
Trigger: ATGGAAGTTGCAAAGGAAGTCATTTGGGACCTTTCAGAAGTGTAGTATCCTGAAACACCAAGCAAATTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS TCA 72 bp GCATTTTGTCTAGGAGAACAATATGAAGAAATGATTTaGAAGGAAGCAGATCTTTGTGGAGATTCCTGGGCG +
Preference number: 6 (lower is better)
Translates to: AFCLGEQYEEMI*KEADLCGDSWA
Trigger: CGCCCAGGAATCTCCACAAAGATCTGCTTCCTTTCAAATCATTTCTTCATATTGTTCTCCTAGACAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586135.1
CDS TCA 72 bp TCTGAATTTGCTTGGTGTTTCAGGATACTACACTTCTaGAAGGTCCCAAATGATTGCCTTTGCAACTTCCAT +
Preference number: 6 (lower is better)
Translates to: SEFAWCFRILHF*KVPNDCLCNFH
Trigger: ATGGAAGTTGCAAAGGCAATCATTTGGGACCTTTCAGAAGTGTAGTATCCTGAAACACCAAGCAAATTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591911.1
CDS TCA 72 bp CTGGTGGCTTTATGGAGAATAATAGGTTACCCTTGCTaGGTGCTTATTATATTCTATGCTGAACACTCTACC +
Preference number: 6 (lower is better)
Translates to: LVALWRIIGYPC*VLIIFYAEHST
Trigger: GGTAGAGTGTTCAGCATAGAATATAATAAGCACTCAGCAAGGGTAACCTATTATTCTCCATAAAGCCACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS CCA 72 bp CTTCTACCCAGGAAGCTCTTTCCTCAAATATCTTCATaGCTCACTTTAGGACTTATGTCATATGTCATGTCA +
Preference number: 6 (lower is better)
Translates to: LLPRKLFPQISS*LTLGLMSYVMS
Trigger: TGACATGACATATGACATAAGTCCTAAAGTGAGCCATGAAGATATTTGAGGAAAGAGCTTCCTGGGTAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591619.5
CDS CAA 90 bp ATTTTTATGCATTATTATATTCGAGGCTTAGAGAATATAGGCAACTaGCCTAAATCTACACAGCTCACAAGTGGTAAGGCTGGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: IFMHYYIRGLENIGN*PKSTQLTSGKAGFS
Trigger: GGAGAACCCAGCCTTACCACTTGTGAGCTGTGTAGATTTAGGCAAGTTGCCTATATTCTCTAAGCCTCGAATATAATAATGCATAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS TCA 72 bp CCTGTGTTAGCTCATTTAACCTTCACAATAACTTCATaGGGTAGGTTCTGCAATGATCCCCATTTAAAGATG +
Preference number: 6 (lower is better)
Translates to: PVLAHLTFTITS*GRFCNDPHLKM
Trigger: CATCTTTAAATGGGGATCATTGCAGAACCTACCTCATGAAGTTATTGTGAAGGTTAAATGAGCTAACACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601437.2
CDS TCA 72 bp GGGAAACTAACTAATGCTTTAATCCAGGTTGTGACATaGTATAATGACCTGGTGGCTTTATGGAGAATAATA +
Preference number: 6 (lower is better)
Translates to: GKLTNALIQVVT*YNDLVALWRII
Trigger: TATTATTCTCCATAAAGCCACCAGGTCATTATATCATGTCACAACCTGGATTAAAGCATTAGTTAGTTTCCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601437.2