RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIAA1143 (Homo sapiens)

Ensembl gene IDs: ENSG00000163807

Ensembl transcript IDs: ENST00000296121.6, ENST00000627745.2

Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGGGCCACTACTTCATTTACACAGGGTGTACGCCAAGTAACCAATaGCAAACCTCTAGAGGATATTCATTGCTTTGTGCGTTTTGTTCA +
Preference number: 1 (lower is better)
Translates to: TGHYFIYTGCTPSNQ*QTSRGYSLLCAFCS
Trigger: TGAACAAAACGCACAAAGCAATGAATATCCTCTAGAGGTTTGCCATTGGTTACTTGGCGTACACCCTGTGTAAATGAAGTAGTGGCCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR TCA 90 bp AAGTGGCTCTGGTACTCAGGTTTTATCTCTGCACTCCAAGTAGGATaGAAAGATAAGAGCAAAGGCTCATGTTTGCCAAGTCTGTCCTTT +
Preference number: 1 (lower is better)
Translates to: KWLWYSGFISALQVG*KDKSKGSCLPSLSF
Trigger: AAAGGACAGACTTGGCAAACATGAGCCTTTGCTCTTATCTTTTCATCCTACTTGGAGTGCAGAGATAAAACCTGAGTACCAGAGCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR TCA 90 bp TTTAACCAAATCCATTTCCTTTTGCCTAGAGACCACCAAGTTAGATaGTCATGTGACAAGATTTCTAGCCAGTTTCAGGAGAAGACACCA +
Preference number: 1 (lower is better)
Translates to: FNQIHFLLPRDHQVR*SCDKISSQFQEKTP
Trigger: TGGTGTCTTCTCCTGAAACTGGCTAGAAATCTTGTCACATGATCATCTAACTTGGTGGTCTCTAGGCAAAAGGAAATGGATTTGGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR TCA 90 bp CTAGCCAGTTTCAGGAGAAGACACCACCGGCCATCAAGAAGCTACCCTGTCTCCAGGGTGAGAGTTACGTaGTCTCCAATAGGTAGGGAC +
Preference number: 2 (lower is better)
Translates to: LASFRRRHHRPSRSYPVSRVRVT*SPIGRD
Trigger: GTCCCTACCTATTGGAGATCACGTAACTCTCACCCT...GGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTCTCCTGAAACTGGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR GCA 90 bp CTAGCCAGTTTCAGGAGAAGACACCACCGGCCATCAAGAAGCTACCCTGTCTCCGCAAAGGCTCATGTTTaGCAAGTCTGTCCTTTTGTA +
Preference number: 2 (lower is better)
Translates to: LASFRRRHHRPSRSYPVSAKAHV*QVCPFV
Trigger: TACAAAAGGACAGACTTGGCAAACATGAGCCTTTGC...GGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTCTCCTGAAACTGGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR CAA 90 bp AACCCAGCAGCTTTATCAAGCAGAATTCCACCTGTATTTCTTAACTaGCCAGAGCTGAGTCTCATGGCCACCCTTAGCAGGAGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: NPAALSSRIPPVFLN*PELSLMATLSRSWG
Trigger: TCCCCAACTCCTGCTAAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCTGCTTGATAAAGCTGCTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR GCA 90 bp CTAGCCAGTTTCAGGAGAAGACACCACCGGCCATCAAGAAGCTACCCTGTCTCCATTATTTGTCCAAAATaGCAAGAACCTGGACACCCT +
Preference number: 2 (lower is better)
Translates to: LASFRRRHHRPSRSYPVSIICPK*QEPGHP
Trigger: AGGGTGTCCAGGTTCTTGGCATTTTGGACAAATAAT...GGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTCTCCTGAAACTGGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR TCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACAGGCGGAGCTTGCAGTaGGCTGAGATCGCGCCACTG +
Preference number: 2 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNRRSLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCAGCTCACTGCAAGCTCCGCCT...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR CCA 90 bp GATCAGAGGCTACTCCCTTTGCAATCCCCTTGCCTTTTCTGCATTGCAGATGAAATGACCCAAAGCACATaGCTGCCTTCCTTATGCCTA +
Preference number: 2 (lower is better)
Translates to: DQRLLPLQSPCLFCIADEMTQST*LPSLCL
Trigger: TAGGCATAAGGAAGGCAGCCATGTGCTTTGGGTCAT...TTCATCTGCAATGCAGAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR TCA 90 bp GAAGAAAGACCCTCAGTCTCTCAGCCTCCCATAAAGATTTACGAGGATCACGTCGCACTCCAAGTAGGATaGAAAGATAAGAGCAAAGGC +
Preference number: 2 (lower is better)
Translates to: EERPSVSQPPIKIYEDHVALQVG*KDKSKG
Trigger: GCCTTTGCTCTTATCTTTTCATCCTACTTGGAGTGC...GACGTGATCCTCGTAAATCTTTATGGGAGGCTGAGAGACTGAGGGTCTTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR TCA 90 bp AGCACAGTGTTTATTCTTCTCACTACCAAGAAGTCAGAGGTCAGCAATCCAAGCGCACTCCAAGTAGGATaGAAAGATAAGAGCAAAGGC +
Preference number: 2 (lower is better)
Translates to: STVFILLTTKKSEVSNPSALQVG*KDKSKG
Trigger: GCCTTTGCTCTTATCTTTTCATCCTACTTGGAGTGC...GCTTGGATTGCTGACCTCTGACTTCTTGGTAGTGAGAAGAATAAACACTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR TCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACGAGGCAGGTGGATCATaGGGTCAGGAGATTGAGACC +
Preference number: 2 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNEAGGS*GQEIET
Trigger: GGTCTCAATCTCCTGACCTCATGATCCACCTGCCTC...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR GCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGGCAAAGGCTCATGTTTaGCAAGTCTGTCCTTTTGTA +
Preference number: 2 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLAKAHV*QVCPFV
Trigger: TACAAAAGGACAGACTTGGCAAACATGAGCCTTTGC...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR GCA 90 bp AGCACAGTGTTTATTCTTCTCACTACCAAGAAGTCAGAGGTCAGCAATCCAAGCCTCAGGTTTTATCTCTaGACTCCAAGTAGGATGAAA +
Preference number: 2 (lower is better)
Translates to: STVFILLTTKKSEVSNPSLRFYL*TPSRMK
Trigger: TTTCATCCTACTTGGAGTGCAGAGATAAAACCTGAG...GCTTGGATTGCTGACCTCTGACTTCTTGGTAGTGAGAAGAATAAACACTGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR CCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACATGACCCAAAGCACATaGCTGCCTTCCTTATGCCTA +
Preference number: 2 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNMTQST*LPSLCL
Trigger: TAGGCATAAGGAAGGCAGCCATGTGCTTTGGGTCAT...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR GCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACCCTTTGCAATCCCCTTaGCTTTTCTGCATTGCAGAT +
Preference number: 2 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNPLQSP*LFCIAD
Trigger: ATCTGCAATGCAGAAAAGGCAAGGGGATTGCAAAGG...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR CCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACACTTCAGCCTCTGATTaGTCACTTTCTGCACCAATC +
Preference number: 2 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNTSASD*SLSAPI
Trigger: GATTGGTGCAGAAAGTGACCAATCAGAGGCTGAAGT...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR CCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACTTGTCAAGTGTGAGGTaGTGTTTAGCTTCCTTTGGG +
Preference number: 2 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNLSSVR*CLASFG
Trigger: CCCAAAGGAAGCTAAACACCACCTCACACTTGACAA...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR GCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGCTAGAGGATATTCATTaGTTTGTGCGTTTTGTTCAA +
Preference number: 2 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLLEDIH*FVRFVQ
Trigger: TTGAACAAAACGCACAAAGCAATGAATATCCTCTAG...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR TCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACTTTCTGCATTGCAGATaGAAAATGAAAGTGCCTCTG +
Preference number: 2 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNFLHCR*KMKVPL
Trigger: CAGAGGCACTTTCATTTTTCATCTGCAATGCAGAAA...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR TCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACAAGGCTGATTCACATTaGCTTCCTAGAACTGAATCA +
Preference number: 2 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNKADSH*LPRTES
Trigger: TGATTCAGTTCTAGGAAGTCAATGTGAATCAGCCTT...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR TCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACGACCACCAAGTTAGATaGTCATGTGACAAGATTTCT +
Preference number: 2 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNDHQVR*SCDKIS
Trigger: AGAAATCTTGTCACATGATCATCTAACTTGGTGGTC...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR TCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACAGTCTATATGGACAATaGTTCTTGTTGCACTTTGTG +
Preference number: 2 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNSLYGQ*FLLHFV
Trigger: CACAAAGTGCAACAAGAATCATTGTCCATATAGACT...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR CCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACTGTCCAAGGATTTTATaGAAAGCCTGGATAACATTG +
Preference number: 2 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNCPRIL*KAWITL
Trigger: CAATGTTATCCAGGCTTTCCATAAAATCCTTGGACA...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR GCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACAAAAGAACTCTTGAATaGAGGTTTCTGGTAACTTTG +
Preference number: 2 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNKRTLE*RFLVTL
Trigger: CAAAGTTACCAGAAACCTGCATTCAAGAGTTCTTTT...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR CCA 72 bp CTCACTACCAAGAAGTCAGAGGTCAGCAATCCAAGCTaGTGTAGCAGCTCCTCCAGGCATGTCAGCAAGGAG +
Preference number: 3 (lower is better)
Translates to: LTTKKSEVSNPS*CSSSSRHVSKE
Trigger: CTCCTTGCTGACATGCCTGGAGGAGCTGCTACACCAGCTTGGATTGCTGACCTCTGACTTCTTGGTAGTGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR TCA 72 bp GCAGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTaGGTCTCATGGCCACCCTTAGCAGGAGTTGGGGAG +
Preference number: 3 (lower is better)
Translates to: AEFHLYFLTCQS*VSWPPLAGVGE
Trigger: CTCCCCAACTCCTGCTAAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR CAA 90 bp GAAGAAAGACCCTCAGTCTCTCAGCCTCCCATAAAGATTTACGAGGATCACGTCCAGAGGCTACTCCCTTaGCAATCCCCTTGCCTTTTC +
Preference number: 3 (lower is better)
Translates to: EERPSVSQPPIKIYEDHVQRLLP*QSPCLF
Trigger: GAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTG...GACGTGATCCTCGTAAATCTTTATGGGAGGCTGAGAGACTGAGGGTCTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR CAA 90 bp GAAGAAAGACCCTCAGTCTCTCAGCCTCCCATAAAGATTTACGAGGATCACGTCCCTGTATTTCTTAACTaGCCAGAGCTGAGTCTCATG +
Preference number: 3 (lower is better)
Translates to: EERPSVSQPPIKIYEDHVPVFLN*PELSLM
Trigger: CATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGG...GACGTGATCCTCGTAAATCTTTATGGGAGGCTGAGAGACTGAGGGTCTTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR CCA 72 bp TCTGCATTGCAGATGAAAAATGAAAGTGCCTCTGATTaGTCCCCTCCTGCAACCAATCAGACTGGTCATAGG +
Preference number: 3 (lower is better)
Translates to: SALQMKNESASD*SPPATNQTGHR
Trigger: CCTATGACCAGTCTGATTGGTTGCAGGAGGGGACCAATCAGAGGCACTTTCATTTTTCATCTGCAATGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR GCA 72 bp ACTAACATGACCCAAAGCACATGGCTGCCTTCCTTATaGCTAAAAGTGGCTCTGGTACTCAGGTTTTATCTC +
Preference number: 3 (lower is better)
Translates to: TNMTQSTWLPSL*LKVALVLRFYL
Trigger: GAGATAAAACCTGAGTACCAGAGCCACTTTTAGGCATAAGGAAGGCAGCCATGTGCTTTGGGTCATGTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR CCA 72 bp GCTCTGAGTCTTTTTACTAACATGACCCAAAGCACATaGCTGCCTTCCTTATGCCTAAAAGTGGCTCTGGTA +
Preference number: 3 (lower is better)
Translates to: ALSLFTNMTQST*LPSLCLKVALV
Trigger: TACCAGAGCCACTTTTAGGCATAAGGAAGGCAGCCATGTGCTTTGGGTCATGTTAGTAAAAAGACTCAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR CAA 90 bp AGCACAGTGTTTATTCTTCTCACTACCAAGAAGTCAGAGGTCAGCAATCCAAGCAGCAAAGGCTCATGTTaGCCAAGTCTGTCCTTTTGT +
Preference number: 3 (lower is better)
Translates to: STVFILLTTKKSEVSNPSSKGSC*PSLSFC
Trigger: ACAAAAGGACAGACTTGGCAAACATGAGCCTTTGCT...GCTTGGATTGCTGACCTCTGACTTCTTGGTAGTGAGAAGAATAAACACTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR GCA 72 bp ATGGGACTGCAGTTTATTTTGAAGTTAGGTCGGTTCTaGTGTGATTTGTCTTTGGTGGAAGTGGTAGACTGG +
Preference number: 3 (lower is better)
Translates to: MGLQFILKLGRF*CDLSLVEVVDW
Trigger: CCAGTCTACCACTTCCACCAAAGACAAATCACAGCAGAACCGACCTAACTTCAAAATAAACTGCAGTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR CAA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACCTAAAGGGCACTAAGTaGGGTTTCATGGCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNLKGTK*GFMAPS
Trigger: GGAGGGAGCCATGAAACCCAACTTAGTGCCCTTTAG...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR TCA 72 bp ACTGCAGTTTATTTTGAAGTTAGGTCGGTTCTGCTGTaGTTTGTCTTTGGTGGAAGTGGTAGACTGGAGACA +
Preference number: 3 (lower is better)
Translates to: TAVYFEVRSVLL*FVFGGSGRLET
Trigger: TGTCTCCAGTCTACCACTTCCACCAAAGACAAATCACAGCAGAACCGACCTAACTTCAAAATAAACTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR CAA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACTACAAGCATGAGCCATaGTGTCTGGCCTGGGTGATT +
Preference number: 3 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNYKHEP*CLAWVI
Trigger: AATCACCCAGGCCAGACACAATGGCTCATGCTTGTA...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR TCA 72 bp ATCCATTTCCTTTTGCCTAGAGACCACCAAGTTAGATaGTCATGTGACAAGATTTCTAGCCAGTTTCAGGAG +
Preference number: 3 (lower is better)
Translates to: IHFLLPRDHQVR*SCDKISSQFQE
Trigger: CTCCTGAAACTGGCTAGAAATCTTGTCACATGATCATCTAACTTGGTGGTCTCTAGGCAAAAGGAAATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR CAA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACCAAATCCATTTCCTTTaGCCTAGAGACCACCAAGTT +
Preference number: 3 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNQIHFL*PRDHQV
Trigger: AACTTGGTGGTCTCTAGGCAAAAGGAAATGGATTTG...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR CAA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACGAAGTAGAGCAGGAGTaGATTACATGGACTGAAATG +
Preference number: 3 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNEVEQE*ITWTEM
Trigger: CATTTCAGTCCATGTAATCAACTCCTGCTCTACTTC...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR TCA 72 bp TGGCTTATGTATTTTCCTAGAAGAAGAATGCTGTTTTaGTGTCAACCAATCAGGATTAGTAAGGGACACCAC +
Preference number: 3 (lower is better)
Translates to: WLMYFPRRRMLF*CQPIRISKGHH
Trigger: GTGGTGTCCCTTACTAATCCTGATTGGTTGACATCAAAACAGCATTCTTCTTCTAGGAAAATACATAAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR CAA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACAAAGCCTGGATAACATaGCTCAAAGTATTGTCACCT +
Preference number: 3 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNKAWIT*LKVLSP
Trigger: AGGTGACAATACTTTGAGCAATGTTATCCAGGCTTT...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR CAA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACCCAAGGCTTACTTCTTaGGAGTTCATGAAAAGAACT +
Preference number: 3 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNPRLTS*EFMKRT
Trigger: AGTTCTTTTCATGAACTCCAAAGAAGTAAGCCTTGG...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR CCA 72 bp ATTACCAACGCTTGTCCAAGGATTTTATGGAAAGCCTaGATAACATTGCTCAAAGTATTGTCACCTTACAAA +
Preference number: 3 (lower is better)
Translates to: ITNACPRILWKA*ITLLKVLSPYK
Trigger: TTTGTAAGGTGACAATACTTTGAGCAATGTTATCCAGGCTTTCCATAAAATCCTTGGACAAGCGTTGGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR CAA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACCTTGCCTTTTCTGCATaGCAGATGAAAAATGAAAGT +
Preference number: 3 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNLAFSA*QMKNES
Trigger: ACTTTCATTTTTCATCTGCAATGCAGAAAAGGCAAG...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR-3UTR CAA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACAAGAAGAATGCTGTTTaGATGTCAACCAATCAGGAT +
Preference number: 3 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNKKNAV*MSTNQD
Trigger: ATCCTGATTGGTTGACATCAAAACAGCATTCTTCTT...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR GCA 72 bp CAAGTAACCAATGGCAAACCTCTAGAGGATATTCATTaGTTTGTGCGTTTTGTTCAATTATTTGTCCAAAAT +
Preference number: 3 (lower is better)
Translates to: QVTNGKPLEDIH*FVRFVQLFVQN
Trigger: ATTTTGGACAAATAATTGAACAAAACGCACAAAGCAATGAATATCCTCTAGAGGTTTGCCATTGGTTACTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR GCA 72 bp TATCTGTTAAATCTTTTAACCAAATCCATTTCCTTTTaGCTAGAGACCACCAAGTTAGATGATCATGTGACA +
Preference number: 3 (lower is better)
Translates to: YLLNLLTKSISF*LETTKLDDHVT
Trigger: TGTCACATGATCATCTAACTTGGTGGTCTCTAGGCAAAAGGAAATGGATTTGGTTAAAAGATTTAACAGATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp CTAGCCAGTTTCAGGAGAAGACACCACCGGCCATCAAGAAGCTACCCTGTCTCCCTAAGTTGGGTTTCATaGCTCCCTCCCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LASFRRRHHRPSRSYPVSLSWVS*LPPLAS
Trigger: GCTGGCCAAGGGAGGGAGCCATGAAACCCAACTTAG...GGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTCTCCTGAAACTGGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp CTAGCCAGTTTCAGGAGAAGACACCACCGGCCATCAAGAAGCTACCCTGTCTCCCTTCACTTCAGCCTCTaGTTGGTCACTTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: LASFRRRHHRPSRSYPVSLHFSL*LVTFCT
Trigger: GGTGCAGAAAGTGACCAATCAGAGGCTGAAGTGAAG...GGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTCTCCTGAAACTGGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp CTAGCCAGTTTCAGGAGAAGACACCACCGGCCATCAAGAAGCTACCCTGTCTCCGCAATTCTCCCACCTTaGCTTCCCAAAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LASFRRRHHRPSRSYPVSAILPP*LPKVLG
Trigger: TCCCAACACTTTGGGAAGCCAAGGTGGGAGAATTGC...GGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTCTCCTGAAACTGGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp CTAGCCAGTTTCAGGAGAAGACACCACCGGCCATCAAGAAGCTACCCTGTCTCCCTGGGCTCAGATTCCTaGCTTCAAGCAATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LASFRRRHHRPSRSYPVSLGSDS*LQAILP
Trigger: TGGGAGAATTGCTTGAAGCCAGGAATCTGAGCCCAG...GGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTCTCCTGAAACTGGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp GATCAGAGGCTACTCCCTTTGCAATCCCCTTGCCTTTTCTGCATTGCAGATGAAGCTGAGGCAAGAGAATaGTGTGAACCCAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: DQRLLPLQSPCLFCIADEAEARE*CEPRRR
Trigger: CCGCCTCCTGGGTTCACACCATTCTCTTGCCTCAGC...TTCATCTGCAATGCAGAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp CTAGCCAGTTTCAGGAGAAGACACCACCGGCCATCAAGAAGCTACCCTGTCTCCGCACTCCAAGTAGGATaGAAAGATAAGAGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LASFRRRHHRPSRSYPVSALQVG*KDKSKG
Trigger: GCCTTTGCTCTTATCTTTTCATCCTACTTGGAGTGC...GGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTCTCCTGAAACTGGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GATCAGAGGCTACTCCCTTTGCAATCCCCTTGCCTTTTCTGCATTGCAGATGAAGAGGCAGGTGGATCATaGGGTCAGGAGATTGAGACC +
Preference number: 4 (lower is better)
Translates to: DQRLLPLQSPCLFCIADEEAGGS*GQEIET
Trigger: GGTCTCAATCTCCTGACCTCATGATCCACCTGCCTC...TTCATCTGCAATGCAGAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTGCTGAGGCAAGAGAATaGTGTGAACCCAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RIPPVFLNLPELSLMATLAEARE*CEPRRR
Trigger: CCGCCTCCTGGGTTCACACCATTCTCTTGCCTCAGC...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GAAGAAAGACCCTCAGTCTCTCAGCCTCCCATAAAGATTTACGAGGATCACGTCCTCTCAGGGGGAAAATaGGGCAGGAGAATAGGGTCT +
Preference number: 4 (lower is better)
Translates to: EERPSVSQPPIKIYEDHVLSGGK*GRRIGS
Trigger: AGACCCTATTCTCCTGCCTCATTTTCCCCCTGAGAG...GACGTGATCCTCGTAAATCTTTATGGGAGGCTGAGAGACTGAGGGTCTTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp CTAGCCAGTTTCAGGAGAAGACACCACCGGCCATCAAGAAGCTACCCTGTCTCCTGGAGAGTGTGCCATTaGATTAGACAGAAAACTTCC +
Preference number: 4 (lower is better)
Translates to: LASFRRRHHRPSRSYPVSWRVCH*IRQKTS
Trigger: GGAAGTTTTCTGTCTAATCCAATGGCACACTCTCCA...GGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTCTCCTGAAACTGGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GATCAGAGGCTACTCCCTTTGCAATCCCCTTGCCTTTTCTGCATTGCAGATGAATTAACTTGCCAGAGCTaGGTCTCATGGCCACCCTTA +
Preference number: 4 (lower is better)
Translates to: DQRLLPLQSPCLFCIADELTCQS*VSWPPL
Trigger: TAAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAA...TTCATCTGCAATGCAGAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTCTCTCAGGGGGAAAATaGGGCAGGAGAATAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RIPPVFLNLPELSLMATLLSGGK*GRRIGS
Trigger: AGACCCTATTCTCCTGCCTCATTTTCCCCCTGAGAG...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp CTAGCCAGTTTCAGGAGAAGACACCACCGGCCATCAAGAAGCTACCCTGTCTCCGACCACCAAGTTAGATaGTCATGTGACAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: LASFRRRHHRPSRSYPVSDHQVR*SCDKIS
Trigger: AGAAATCTTGTCACATGATCATCTAACTTGGTGGTC...GGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTCTCCTGAAACTGGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GAAGAAAGACCCTCAGTCTCTCAGCCTCCCATAAAGATTTACGAGGATCACGTCTGGGCCTCTAAAATATaGCAACAGCTGGGGCACCTA +
Preference number: 4 (lower is better)
Translates to: EERPSVSQPPIKIYEDHVWASKI*QQLGHL
Trigger: TAGGTGCCCCAGCTGTTGTCATATTTTAGAGGCCCA...GACGTGATCCTCGTAAATCTTTATGGGAGGCTGAGAGACTGAGGGTCTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGTCCTGCTTAGCCTCCTaGGCAGCTGGGACTACAGGT +
Preference number: 4 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLSCLAS*AAGTTG
Trigger: ACCTGTAGTCCCAGCTGCTCAGGAGGCTAAGCAGGA...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTAGGGTGAGAGTTACGTaGTCTCCAATAGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: RIPPVFLNLPELSLMATLRVRVT*SPIGRD
Trigger: GTCCCTACCTATTGGAGATCACGTAACTCTCACCCT...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR GCA 90 bp GAAGAAAGACCCTCAGTCTCTCAGCCTCCCATAAAGATTTACGAGGATCACGTCAGAGGCTACTCCCTTTaGAATCCCCTTGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: EERPSVSQPPIKIYEDHVRGYSL*NPLAFS
Trigger: AGAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCT...GACGTGATCCTCGTAAATCTTTATGGGAGGCTGAGAGACTGAGGGTCTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGCTAAGTTGGGTTTCATaGCTCCCTCCCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLLSWVS*LPPLAS
Trigger: GCTGGCCAAGGGAGGGAGCCATGAAACCCAACTTAG...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp CTAGCCAGTTTCAGGAGAAGACACCACCGGCCATCAAGAAGCTACCCTGTCTCCTGTCCAAGGATTTTATaGAAAGCCTGGATAACATTG +
Preference number: 4 (lower is better)
Translates to: LASFRRRHHRPSRSYPVSCPRIL*KAWITL
Trigger: CAATGTTATCCAGGCTTTCCATAAAATCCTTGGACA...GGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTCTCCTGAAACTGGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR GCA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTAGAGGCTACTCCCTTTaGAATCCCCTTGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RIPPVFLNLPELSLMATLRGYSL*NPLAFS
Trigger: AGAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCT...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR GCA 90 bp CTAGCCAGTTTCAGGAGAAGACACCACCGGCCATCAAGAAGCTACCCTGTCTCCTTCCTAGAAGAAGAATaGTGTTTTGATGTCAACCAA +
Preference number: 4 (lower is better)
Translates to: LASFRRRHHRPSRSYPVSFLEEE*CFDVNQ
Trigger: TTGGTTGACATCAAAACAGCATTCTTCTTCTAGGAA...GGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTCTCCTGAAACTGGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR GCA 90 bp CTAGCCAGTTTCAGGAGAAGACACCACCGGCCATCAAGAAGCTACCCTGTCTCCAAAAGAACTCTTGAATaGAGGTTTCTGGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: LASFRRRHHRPSRSYPVSKRTLE*RFLVTL
Trigger: CAAAGTTACCAGAAACCTGCATTCAAGAGTTCTTTT...GGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTCTCCTGAAACTGGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTATGACCCAAAGCACATaGCTGCCTTCCTTATGCCTA +
Preference number: 4 (lower is better)
Translates to: RIPPVFLNLPELSLMATLMTQST*LPSLCL
Trigger: TAGGCATAAGGAAGGCAGCCATGTGCTTTGGGTCAT...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp GAAGAAAGACCCTCAGTCTCTCAGCCTCCCATAAAGATTTACGAGGATCACGTCACTTCAGCCTCTGATTaGTCACTTTCTGCACCAATC +
Preference number: 4 (lower is better)
Translates to: EERPSVSQPPIKIYEDHVTSASD*SLSAPI
Trigger: GATTGGTGCAGAAAGTGACCAATCAGAGGCTGAAGT...GACGTGATCCTCGTAAATCTTTATGGGAGGCTGAGAGACTGAGGGTCTTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGAGGGTGAGAGTTACGTaGTCTCCAATAGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLRVRVT*SPIGRD
Trigger: GTCCCTACCTATTGGAGATCACGTAACTCTCACCCT...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GATCAGAGGCTACTCCCTTTGCAATCCCCTTGCCTTTTCTGCATTGCAGATGAAACTGAAATGGCCTTGTaGAATGTTCTAGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: DQRLLPLQSPCLFCIADETEMAL*NVLAKP
Trigger: TGGCTTTGCTAGAACATTTCACAAGGCCATTTCAGT...TTCATCTGCAATGCAGAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACTCCTGCTTAGCCTCCTaGGCAGCTGGGACTACAGGT +
Preference number: 4 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNSCLAS*AAGTTG
Trigger: ACCTGTAGTCCCAGCTGCTCAGGAGGCTAAGCAGGA...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR GCA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTCCTTTGCAATCCCCTTaGCTTTTCTGCATTGCAGAT +
Preference number: 4 (lower is better)
Translates to: RIPPVFLNLPELSLMATLPLQSP*LFCIAD
Trigger: ATCTGCAATGCAGAAAAGGCAAGGGGATTGCAAAGG...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTTTGTCAAGTGTGAGGTaGTGTTTAGCTTCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RIPPVFLNLPELSLMATLLSSVR*CLASFG
Trigger: CCCAAAGGAAGCTAAACACCACCTCACACTTGACAA...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGGCAATTCTCCCACCTTaGCTTCCCAAAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLAILPP*LPKVLG
Trigger: TCCCAACACTTTGGGAAGCCAAGGTGGGAGAATTGC...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GATCAGAGGCTACTCCCTTTGCAATCCCCTTGCCTTTTCTGCATTGCAGATGAATTTCTGCATTGCAGATaGAAAATGAAAGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: DQRLLPLQSPCLFCIADEFLHCR*KMKVPL
Trigger: CAGAGGCACTTTCATTTTTCATCTGCAATGCAGAAA...TTCATCTGCAATGCAGAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGAGGTCGGTTCTGCTGTaGTTTGTCTTTGGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLRSVLL*FVFGGS
Trigger: ACTTCCACCAAAGACAAATCACAGCAGAACCGACCT...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GATCAGAGGCTACTCCCTTTGCAATCCCCTTGCCTTTTCTGCATTGCAGATGAATTCCAAGGCACTAATTaGAAGGCTGATGTGTTCATA +
Preference number: 4 (lower is better)
Translates to: DQRLLPLQSPCLFCIADEFQGTN*KADVFI
Trigger: TATGAACACATCAGCCTTTCAATTAGTGCCTTGGAA...TTCATCTGCAATGCAGAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR GCA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTGCAAAGGCTCATGTTTaGCAAGTCTGTCCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: RIPPVFLNLPELSLMATLAKAHV*QVCPFV
Trigger: TACAAAAGGACAGACTTGGCAAACATGAGCCTTTGC...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR GCA 90 bp GAAGAAAGACCCTCAGTCTCTCAGCCTCCCATAAAGATTTACGAGGATCACGTCATAACACAAACTCCATaGTTTCAAGATTCCCACACC +
Preference number: 4 (lower is better)
Translates to: EERPSVSQPPIKIYEDHVITQTP*FQDSHT
Trigger: GGTGTGGGAATCTTGAAAGCATGGAGTTTGTGTTAT...GACGTGATCCTCGTAAATCTTTATGGGAGGCTGAGAGACTGAGGGTCTTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGATGACCCAAAGCACATaGCTGCCTTCCTTATGCCTA +
Preference number: 4 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLMTQST*LPSLCL
Trigger: TAGGCATAAGGAAGGCAGCCATGTGCTTTGGGTCAT...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp AGCACAGTGTTTATTCTTCTCACTACCAAGAAGTCAGAGGTCAGCAATCCAAGCACTTCAGCCTCTGATTaGTCACTTTCTGCACCAATC +
Preference number: 4 (lower is better)
Translates to: STVFILLTTKKSEVSNPSTSASD*SLSAPI
Trigger: GATTGGTGCAGAAAGTGACCAATCAGAGGCTGAAGT...GCTTGGATTGCTGACCTCTGACTTCTTGGTAGTGAGAAGAATAAACACTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp GATCAGAGGCTACTCCCTTTGCAATCCCCTTGCCTTTTCTGCATTGCAGATGAAGTGGAAGTGGTAGACTaGAGACAGAAATATTGTATG +
Preference number: 4 (lower is better)
Translates to: DQRLLPLQSPCLFCIADEVEVVD*RQKYCM
Trigger: CATACAATATTTCTGTCTCCAGTCTACCACTTCCAC...TTCATCTGCAATGCAGAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTTGGAGAGTGTGCCATTaGATTAGACAGAAAACTTCC +
Preference number: 4 (lower is better)
Translates to: RIPPVFLNLPELSLMATLWRVCH*IRQKTS
Trigger: GGAAGTTTTCTGTCTAATCCAATGGCACACTCTCCA...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGGGCTTCCCAAAGTGTTaGGATTACAAGCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLGFPKC*DYKHEP
Trigger: TGGCTCATGCTTGTAATCCCAACACTTTGGGAAGCC...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGGCACTCCAAGTAGGATaGAAAGATAAGAGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLALQVG*KDKSKG
Trigger: GCCTTTGCTCTTATCTTTTCATCCTACTTGGAGTGC...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GATCAGAGGCTACTCCCTTTGCAATCCCCTTGCCTTTTCTGCATTGCAGATGAAAGTCTATATGGACAATaGTTCTTGTTGCACTTTGTG +
Preference number: 4 (lower is better)
Translates to: DQRLLPLQSPCLFCIADESLYGQ*FLLHFV
Trigger: CACAAAGTGCAACAAGAATCATTGTCCATATAGACT...TTCATCTGCAATGCAGAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGCACAGTGTTTATTCTTCTCACTACCAAGAAGTCAGAGGTCAGCAATCCAAGCACTTTCTCAGGACTTTaGCTGAAATGGCCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: STVFILLTTKKSEVSNPSTFSGL*LKWPCE
Trigger: TTCACAAGGCCATTTCAGTCAAAGTCCTGAGAAAGT...GCTTGGATTGCTGACCTCTGACTTCTTGGTAGTGAGAAGAATAAACACTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTCATGAAAAGAACTCTTaGATGCAGGTTTCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: RIPPVFLNLPELSLMATLHEKNS*MQVSGN
Trigger: GTTACCAGAAACCTGCATTCAAGAGTTCTTTTCATG...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GAAGAAAGACCCTCAGTCTCTCAGCCTCCCATAAAGATTTACGAGGATCACGTCCTTCTTTGGAGTTCATaGAAAGAACTCTTGAATGCA +
Preference number: 4 (lower is better)
Translates to: EERPSVSQPPIKIYEDHVLLWSS*KELLNA
Trigger: TGCATTCAAGAGTTCTTTTCATGAACTCCAAAGAAG...GACGTGATCCTCGTAAATCTTTATGGGAGGCTGAGAGACTGAGGGTCTTTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTTTGAGAATACAGTGGTaGATAACACAAACTCCATGC +
Preference number: 4 (lower is better)
Translates to: RIPPVFLNLPELSLMATLLRIQW*ITQTPC
Trigger: GCATGGAGTTTGTGTTATTCACCACTGTATTCTCAA...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGCACAGTGTTTATTCTTCTCACTACCAAGAAGTCAGAGGTCAGCAATCCAAGCGGCCAGATACTCTTCTaGTATTTGAGAATACAGTGG +
Preference number: 4 (lower is better)
Translates to: STVFILLTTKKSEVSNPSGQILF*YLRIQW
Trigger: CCACTGTATTCTCAAATATCAGAAGAGTATCTGGCC...GCTTGGATTGCTGACCTCTGACTTCTTGGTAGTGAGAAGAATAAACACTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR GCA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTATTATTTGTCCAAAATaGCAAGAACCTGGACACCCT +
Preference number: 4 (lower is better)
Translates to: RIPPVFLNLPELSLMATLIICPK*QEPGHP
Trigger: AGGGTGTCCAGGTTCTTGGCATTTTGGACAAATAAT...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR GCA 90 bp AGCACAGTGTTTATTCTTCTCACTACCAAGAAGTCAGAGGTCAGCAATCCAAGCAAGTTAGGTCGGTTCTaGTGTGATTTGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: STVFILLTTKKSEVSNPSKLGRF*CDLSLV
Trigger: CACCAAAGACAAATCACAGCAGAACCGACCTAACTT...GCTTGGATTGCTGACCTCTGACTTCTTGGTAGTGAGAAGAATAAACACTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACCGCACGTACGATACCTaGTTCCGCTTGCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNRTYDT*FRLLMV
Trigger: TACCATGAGCAAGCGGAACCAGGTATCGTACGTGCG...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp GATCAGAGGCTACTCCCTTTGCAATCCCCTTGCCTTTTCTGCATTGCAGATGAATGTCCAAGGATTTTATaGAAAGCCTGGATAACATTG +
Preference number: 4 (lower is better)
Translates to: DQRLLPLQSPCLFCIADECPRIL*KAWITL
Trigger: CAATGTTATCCAGGCTTTCCATAAAATCCTTGGACA...TTCATCTGCAATGCAGAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTGTGGAAGTGGTAGACTaGAGACAGAAATATTGTATG +
Preference number: 4 (lower is better)
Translates to: RIPPVFLNLPELSLMATLVEVVD*RQKYCM
Trigger: CATACAATATTTCTGTCTCCAGTCTACCACTTCCAC...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGTTGTCAAGTGTGAGGTaGTGTTTAGCTTCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLLSSVR*CLASFG
Trigger: CCCAAAGGAAGCTAAACACCACCTCACACTTGACAA...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR CAA 72 bp GGTAATCAGGCCCAGTATATGGGACTGCAGTTTATTTaGAAGTTAGGTCGGTTCTGCTGTGATTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GNQAQYMGLQFI*KLGRFCCDLSL
Trigger: CAAAGACAAATCACAGCAGAACCGACCTAACTTCAAAATAAACTGCAGTCCCATATACTGGGCCTGATTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACCTTCACTTCAGCCTCTaGTTGGTCACTTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNLHFSL*LVTFCT
Trigger: GGTGCAGAAAGTGACCAATCAGAGGCTGAAGTGAAG...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGCACAGTGTTTATTCTTCTCACTACCAAGAAGTCAGAGGTCAGCAATCCAAGCGACCACCAAGTTAGATaGTCATGTGACAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: STVFILLTTKKSEVSNPSDHQVR*SCDKIS
Trigger: AGAAATCTTGTCACATGATCATCTAACTTGGTGGTC...GCTTGGATTGCTGACCTCTGACTTCTTGGTAGTGAGAAGAATAAACACTGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACTGGGCCTCTAAAATATaGCAACAGCTGGGGCACCTA +
Preference number: 4 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNWASKI*QQLGHL
Trigger: TAGGTGCCCCAGCTGTTGTCATATTTTAGAGGCCCA...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTAGTCTATATGGACAATaGTTCTTGTTGCACTTTGTG +
Preference number: 4 (lower is better)
Translates to: RIPPVFLNLPELSLMATLSLYGQ*FLLHFV
Trigger: CACAAAGTGCAACAAGAATCATTGTCCATATAGACT...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGACTGAAATGGCCTTGTaGAATGTTCTAGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLTEMAL*NVLAKP
Trigger: TGGCTTTGCTAGAACATTTCACAAGGCCATTTCAGT...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGGGCCAGATACTCTTCTaGTATTTGAGAATACAGTGG +
Preference number: 4 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLGQILF*YLRIQW
Trigger: CCACTGTATTCTCAAATATCAGAAGAGTATCTGGCC...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR GCA 90 bp GATCAGAGGCTACTCCCTTTGCAATCCCCTTGCCTTTTCTGCATTGCAGATGAAAAAAGAACTCTTGAATaGAGGTTTCTGGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: DQRLLPLQSPCLFCIADEKRTLE*RFLVTL
Trigger: CAAAGTTACCAGAAACCTGCATTCAAGAGTTCTTTT...TTCATCTGCAATGCAGAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTGATC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACGTAGTCCCAGATACTTaGGAGGCTGAGGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNVVPDT*EAEARE
Trigger: TTCTCTTGCCTCAGCCTCCCAAGTATCTGGGACTAC...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGAAGGCTGATTCACATTaGCTTCCTAGAACTGAATCA +
Preference number: 4 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLKADSH*LPRTES
Trigger: TGATTCAGTTCTAGGAAGTCAATGTGAATCAGCCTT...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGCACAGTGTTTATTCTTCTCACTACCAAGAAGTCAGAGGTCAGCAATCCAAGCAGAAGAATGCTGTTTTaGTGTCAACCAATCAGGATT +
Preference number: 4 (lower is better)
Translates to: STVFILLTTKKSEVSNPSRRMLF*CQPIRI
Trigger: AATCCTGATTGGTTGACATCAAAACAGCATTCTTCT...GCTTGGATTGCTGACCTCTGACTTCTTGGTAGTGAGAAGAATAAACACTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACAGGTCGGTTCTGCTGTaGTTTGTCTTTGGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNRSVLL*FVFGGS
Trigger: ACTTCCACCAAAGACAAATCACAGCAGAACCGACCT...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGTTCCAAGGCACTAATTaGAAGGCTGATGTGTTCATA +
Preference number: 4 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLFQGTN*KADVFI
Trigger: TATGAACACATCAGCCTTTCAATTAGTGCCTTGGAA...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGCACAGTGTTTATTCTTCTCACTACCAAGAAGTCAGAGGTCAGCAATCCAAGCCTTCTTTGGAGTTCATaGAAAGAACTCTTGAATGCA +
Preference number: 4 (lower is better)
Translates to: STVFILLTTKKSEVSNPSLLWSS*KELLNA
Trigger: TGCATTCAAGAGTTCTTTTCATGAACTCCAAAGAAG...GCTTGGATTGCTGACCTCTGACTTCTTGGTAGTGAGAAGAATAAACACTGTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR GCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGCTCAGGTTTTATCTCTaGACTCCAAGTAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLLRFYL*TPSRMK
Trigger: TTTCATCCTACTTGGAGTGCAGAGATAAAACCTGAG...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR GCA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTCTAGAGGATATTCATTaGTTTGTGCGTTTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: RIPPVFLNLPELSLMATLLEDIH*FVRFVQ
Trigger: TTGAACAAAACGCACAAAGCAATGAATATCCTCTAG...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACGGCTTCCCAAAGTGTTaGGATTACAAGCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNGFPKC*DYKHEP
Trigger: TGGCTCATGCTTGTAATCCCAACACTTTGGGAAGCC...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGGTTGATTACATGGACTaGAATGAACTAATGGAAGAC +
Preference number: 4 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLVDYMD*NELMED
Trigger: GTCTTCCATTAGTTCATTTCAGTCCATGTAATCAAC...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACCCATTGTGTCTGGCCTaGGTGATTCTTTATCTGACA +
Preference number: 4 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNPLCLA*VILYLT
Trigger: TGTCAGATAAAGAATCACCCAGGCCAGACACAATGG...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR CAA 72 bp ATTTTGAAGTTAGGTCGGTTCTGCTGTGATTTGTCTTaGGTGGAAGTGGTAGACTGGAGACAGAAATATTGT +
Preference number: 4 (lower is better)
Translates to: ILKLGRFCCDLS*VEVVDWRQKYC
Trigger: ACAATATTTCTGTCTCCAGTCTACCACTTCCACCAAAGACAAATCACAGCAGAACCGACCTAACTTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR GCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACAAGTTAGGTCGGTTCTaGTGTGATTTGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNKLGRF*CDLSLV
Trigger: CACCAAAGACAAATCACAGCAGAACCGACCTAACTT...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACCATGAAAAGAACTCTTaGATGCAGGTTTCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNHEKNS*MQVSGN
Trigger: GTTACCAGAAACCTGCATTCAAGAGTTCTTTTCATG...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACTTGAGAATACAGTGGTaGATAACACAAACTCCATGC +
Preference number: 4 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNLRIQW*ITQTPC
Trigger: GCATGGAGTTTGTGTTATTCACCACTGTATTCTCAA...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR GCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACCTCAGGTTTTATCTCTaGACTCCAAGTAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNLRFYL*TPSRMK
Trigger: TTTCATCCTACTTGGAGTGCAGAGATAAAACCTGAG...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACAGAAGAATGCTGTTTTaGTGTCAACCAATCAGGATT +
Preference number: 4 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNRRMLF*CQPIRI
Trigger: AATCCTGATTGGTTGACATCAAAACAGCATTCTTCT...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR TCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACGTTGATTACATGGACTaGAATGAACTAATGGAAGAC +
Preference number: 4 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNVDYMD*NELMED
Trigger: GTCTTCCATTAGTTCATTTCAGTCCATGTAATCAAC...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR GCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACCTAGAGGATATTCATTaGTTTGTGCGTTTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNLEDIH*FVRFVQ
Trigger: TTGAACAAAACGCACAAAGCAATGAATATCCTCTAG...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR GCA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACTTCCTAGAAGAAGAATaGTGTTTTGATGTCAACCAA +
Preference number: 4 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNFLEEE*CFDVNQ
Trigger: TTGGTTGACATCAAAACAGCATTCTTCTTCTAGGAA...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
3UTR CAA 72 bp CCAAGTAACCAATGGCAAACCTCTAGAGGATATTCATaGCTTTGTGCGTTTTGTTCAATTATTTGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: PSNQWQTSRGYS*LCAFCSIICPK
Trigger: TTTTGGACAAATAATTGAACAAAACGCACAAAGCAATGAATATCCTCTAGAGGTTTGCCATTGGTTACTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp CTAGCCAGTTTCAGGAGAAGACACCACCGGCCATCAAGAAGCTACCCTGTCTCCTCATGGCTCCCTCCCTaGGCCAGCCCATTATTAATG +
Preference number: 5 (lower is better)
Translates to: LASFRRRHHRPSRSYPVSSWLPP*ASPLLM
Trigger: CATTAATAATGGGCTGGCCAAGGGAGGGAGCCATGA...GGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTCTCCTGAAACTGGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp CTAGCCAGTTTCAGGAGAAGACACCACCGGCCATCAAGAAGCTACCCTGTCTCCCTAAAGGGCACTAAGTaGGGTTTCATGGCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: LASFRRRHHRPSRSYPVSLKGTK*GFMAPS
Trigger: GGAGGGAGCCATGAAACCCAACTTAGTGCCCTTTAG...GGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTCTCCTGAAACTGGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp CTAGCCAGTTTCAGGAGAAGACACCACCGGCCATCAAGAAGCTACCCTGTCTCCTACAAGCATGAGCCATaGTGTCTGGCCTGGGTGATT +
Preference number: 5 (lower is better)
Translates to: LASFRRRHHRPSRSYPVSYKHEP*CLAWVI
Trigger: AATCACCCAGGCCAGACACAATGGCTCATGCTTGTA...GGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTCTCCTGAAACTGGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp AGCACAGTGTTTATTCTTCTCACTACCAAGAAGTCAGAGGTCAGCAATCCAAGCGATACCTGGTTCCGCTaGCTCATGGTAGCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: STVFILLTTKKSEVSNPSDTWFR*LMVALG
Trigger: ACCCAGAGCTACCATGAGCAAGCGGAACCAGGTATC...GCTTGGATTGCTGACCTCTGACTTCTTGGTAGTGAGAAGAATAAACACTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTTCATGGCTCCCTCCCTaGGCCAGCCCATTATTAATG +
Preference number: 5 (lower is better)
Translates to: RIPPVFLNLPELSLMATLSWLPP*ASPLLM
Trigger: CATTAATAATGGGCTGGCCAAGGGAGGGAGCCATGA...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGGATACCTGGTTCCGCTaGCTCATGGTAGCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLDTWFR*LMVALG
Trigger: ACCCAGAGCTACCATGAGCAAGCGGAACCAGGTATC...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GAAGAAAGACCCTCAGTCTCTCAGCCTCCCATAAAGATTTACGAGGATCACGTCTGGGAGTTAGCGGGATaGCAACTTCCCTATCCTATT +
Preference number: 5 (lower is better)
Translates to: EERPSVSQPPIKIYEDHVWELAG*QLPYPI
Trigger: AATAGGATAGGGAAGTTGCAATCCCGCTAACTCCCA...GACGTGATCCTCGTAAATCTTTATGGGAGGCTGAGAGACTGAGGGTCTTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GAAGAAAGACCCTCAGTCTCTCAGCCTCCCATAAAGATTTACGAGGATCACGTCTGCTGTGATTTGTCTTaGGTGGAAGTGGTAGACTGG +
Preference number: 5 (lower is better)
Translates to: EERPSVSQPPIKIYEDHVCCDLS*VEVVDW
Trigger: CCAGTCTACCACTTCCACCAAAGACAAATCACAGCA...GACGTGATCCTCGTAAATCTTTATGGGAGGCTGAGAGACTGAGGGTCTTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GATCAGAGGCTACTCCCTTTGCAATCCCCTTGCCTTTTCTGCATTGCAGATGAATGCTGTGATTTGTCTTaGGTGGAAGTGGTAGACTGG +
Preference number: 5 (lower is better)
Translates to: DQRLLPLQSPCLFCIADECCDLS*VEVVDW
Trigger: CCAGTCTACCACTTCCACCAAAGACAAATCACAGCA...TTCATCTGCAATGCAGAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GAAGAAAGACCCTCAGTCTCTCAGCCTCCCATAAAGATTTACGAGGATCACGTCCGGTTCTGCTGTGATTaGTCTTTGGTGGAAGTGGTA +
Preference number: 5 (lower is better)
Translates to: EERPSVSQPPIKIYEDHVRFCCD*SLVEVV
Trigger: TACCACTTCCACCAAAGACAAATCACAGCAGAACCG...GACGTGATCCTCGTAAATCTTTATGGGAGGCTGAGAGACTGAGGGTCTTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTTACAAGCATGAGCCATaGTGTCTGGCCTGGGTGATT +
Preference number: 5 (lower is better)
Translates to: RIPPVFLNLPELSLMATLYKHEP*CLAWVI
Trigger: AATCACCCAGGCCAGACACAATGGCTCATGCTTGTA...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GAAGAAAGACCCTCAGTCTCTCAGCCTCCCATAAAGATTTACGAGGATCACGTCAGCAAAGGCTCATGTTaGCCAAGTCTGTCCTTTTGT +
Preference number: 5 (lower is better)
Translates to: EERPSVSQPPIKIYEDHVSKGSC*PSLSFC
Trigger: ACAAAAGGACAGACTTGGCAAACATGAGCCTTTGCT...GACGTGATCCTCGTAAATCTTTATGGGAGGCTGAGAGACTGAGGGTCTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGCAGAGGCTACTCCCTTaGCAATCCCCTTGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLQRLLP*QSPCLF
Trigger: GAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTG...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGCTAAAGGGCACTAAGTaGGGTTTCATGGCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLLKGTK*GFMAPS
Trigger: GGAGGGAGCCATGAAACCCAACTTAGTGCCCTTTAG...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GAAGAAAGACCCTCAGTCTCTCAGCCTCCCATAAAGATTTACGAGGATCACGTCAGGTTTCTGGTAACTTaGGAGAGTGTGCCATTGGAT +
Preference number: 5 (lower is better)
Translates to: EERPSVSQPPIKIYEDHVRFLVT*ESVPLD
Trigger: ATCCAATGGCACACTCTCCAAAGTTACCAGAAACCT...GACGTGATCCTCGTAAATCTTTATGGGAGGCTGAGAGACTGAGGGTCTTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GATCAGAGGCTACTCCCTTTGCAATCCCCTTGCCTTTTCTGCATTGCAGATGAAAGGTTTCTGGTAACTTaGGAGAGTGTGCCATTGGAT +
Preference number: 5 (lower is better)
Translates to: DQRLLPLQSPCLFCIADERFLVT*ESVPLD
Trigger: ATCCAATGGCACACTCTCCAAAGTTACCAGAAACCT...TTCATCTGCAATGCAGAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTCCTGTATTTCTTAACTaGCCAGAGCTGAGTCTCATG +
Preference number: 5 (lower is better)
Translates to: RIPPVFLNLPELSLMATLPVFLN*PELSLM
Trigger: CATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGG...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp AGCACAGTGTTTATTCTTCTCACTACCAAGAAGTCAGAGGTCAGCAATCCAAGCTGGGAGTTAGCGGGATaGCAACTTCCCTATCCTATT +
Preference number: 5 (lower is better)
Translates to: STVFILLTTKKSEVSNPSWELAG*QLPYPI
Trigger: AATAGGATAGGGAAGTTGCAATCCCGCTAACTCCCA...GCTTGGATTGCTGACCTCTGACTTCTTGGTAGTGAGAAGAATAAACACTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTGGACTGCAGTTTATTTaGAAGTTAGGTCGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: RIPPVFLNLPELSLMATLGLQFI*KLGRFC
Trigger: GCAGAACCGACCTAACTTCAAAATAAACTGCAGTCC...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GATCAGAGGCTACTCCCTTTGCAATCCCCTTGCCTTTTCTGCATTGCAGATGAAGAAGTAGAGCAGGAGTaGATTACATGGACTGAAATG +
Preference number: 5 (lower is better)
Translates to: DQRLLPLQSPCLFCIADEEVEQE*ITWTEM
Trigger: CATTTCAGTCCATGTAATCAACTCCTGCTCTACTTC...TTCATCTGCAATGCAGAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp AGCACAGTGTTTATTCTTCTCACTACCAAGAAGTCAGAGGTCAGCAATCCAAGCGGACTGCAGTTTATTTaGAAGTTAGGTCGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: STVFILLTTKKSEVSNPSGLQFI*KLGRFC
Trigger: GCAGAACCGACCTAACTTCAAAATAAACTGCAGTCC...GCTTGGATTGCTGACCTCTGACTTCTTGGTAGTGAGAAGAATAAACACTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GAAGAAAGACCCTCAGTCTCTCAGCCTCCCATAAAGATTTACGAGGATCACGTCTCTAGAGGATATTCATaGCTTTGTGCGTTTTGTTCA +
Preference number: 5 (lower is better)
Translates to: EERPSVSQPPIKIYEDHVSRGYS*LCAFCS
Trigger: TGAACAAAACGCACAAAGCAATGAATATCCTCTAGA...GACGTGATCCTCGTAAATCTTTATGGGAGGCTGAGAGACTGAGGGTCTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GAAGAAAGACCCTCAGTCTCTCAGCCTCCCATAAAGATTTACGAGGATCACGTCCTTGCCTTTTCTGCATaGCAGATGAAAAATGAAAGT +
Preference number: 5 (lower is better)
Translates to: EERPSVSQPPIKIYEDHVLAFSA*QMKNES
Trigger: ACTTTCATTTTTCATCTGCAATGCAGAAAAGGCAAG...GACGTGATCCTCGTAAATCTTTATGGGAGGCTGAGAGACTGAGGGTCTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACCAGAGGCTACTCCCTTaGCAATCCCCTTGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNQRLLP*QSPCLF
Trigger: GAAAAGGCAAGGGGATTGCAAAGGGAGTAGCCTCTG...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTAAAGCCTGGATAACATaGCTCAAAGTATTGTCACCT +
Preference number: 5 (lower is better)
Translates to: RIPPVFLNLPELSLMATLKAWIT*LKVLSP
Trigger: AGGTGACAATACTTTGAGCAATGTTATCCAGGCTTT...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp AGCACAGTGTTTATTCTTCTCACTACCAAGAAGTCAGAGGTCAGCAATCCAAGCGAAGTAGAGCAGGAGTaGATTACATGGACTGAAATG +
Preference number: 5 (lower is better)
Translates to: STVFILLTTKKSEVSNPSEVEQE*ITWTEM
Trigger: CATTTCAGTCCATGTAATCAACTCCTGCTCTACTTC...GCTTGGATTGCTGACCTCTGACTTCTTGGTAGTGAGAAGAATAAACACTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTTACTTAGGACTGCATTaGGCTGCATATAAAAGAAAC +
Preference number: 5 (lower is better)
Translates to: RIPPVFLNLPELSLMATLYLGLH*AAYKRN
Trigger: GTTTCTTTTATATGCAGCCAAATGCAGTCCTAAGTA...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGCAAATCCATTTCCTTTaGCCTAGAGACCACCAAGTT +
Preference number: 5 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLQIHFL*PRDHQV
Trigger: AACTTGGTGGTCTCTAGGCAAAAGGAAATGGATTTG...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp AGAATTCCACCTGTATTTCTTAACTTGCCAGAGCTGAGTCTCATGGCCACCCTTAAGAAGAATGCTGTTTaGATGTCAACCAATCAGGAT +
Preference number: 5 (lower is better)
Translates to: RIPPVFLNLPELSLMATLKKNAV*MSTNQD
Trigger: ATCCTGATTGGTTGACATCAAAACAGCATTCTTCTT...AAGGGTGGCCATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGGTGGAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp AGCACAGTGTTTATTCTTCTCACTACCAAGAAGTCAGAGGTCAGCAATCCAAGCCCAAGGCTTACTTCTTaGGAGTTCATGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: STVFILLTTKKSEVSNPSPRLTS*EFMKRT
Trigger: AGTTCTTTTCATGAACTCCAAAGAAGTAAGCCTTGG...GCTTGGATTGCTGACCTCTGACTTCTTGGTAGTGAGAAGAATAAACACTGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGAAAGCCTGGATAACATaGCTCAAAGTATTGTCACCT +
Preference number: 5 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLKAWIT*LKVLSP
Trigger: AGGTGACAATACTTTGAGCAATGTTATCCAGGCTTT...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGCCAAGGCTTACTTCTTaGGAGTTCATGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLPRLTS*EFMKRT
Trigger: AGTTCTTTTCATGAACTCCAAAGAAGTAAGCCTTGG...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp AGTAGGCCAGATACTCTTCTGATATTTGAGAATACAGTGGTGAATAACACAAACCCTGTATTTCTTAACTaGCCAGAGCTGAGTCTCATG +
Preference number: 5 (lower is better)
Translates to: SRPDTLLIFENTVVNNTNPVFLN*PELSLM
Trigger: CATGAGACTCAGCTCTGGCAAGTTAAGAAATACAGG...GTTTGTGTTATTCACCACTGTATTCTCAAATATCAGAAGAGTATCTGGCCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGTACTTAGGACTGCATTaGGCTGCATATAAAAGAAAC +
Preference number: 5 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLYLGLH*AAYKRN
Trigger: GTTTCTTTTATATGCAGCCAAATGCAGTCCTAAGTA...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGTCTAGAGGATATTCATaGCTTTGTGCGTTTTGTTCA +
Preference number: 5 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLSRGYS*LCAFCS
Trigger: TGAACAAAACGCACAAAGCAATGAATATCCTCTAGA...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGCTTGCCTTTTCTGCATaGCAGATGAAAAATGAAAGT +
Preference number: 5 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLLAFSA*QMKNES
Trigger: ACTTTCATTTTTCATCTGCAATGCAGAAAAGGCAAG...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2
CDS-3UTR CAA 90 bp GCCAAGTCCTCATTTACACAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGAAGAAGAATGCTGTTTaGATGTCAACCAATCAGGAT +
Preference number: 5 (lower is better)
Translates to: AKSSFTQEYNFVTSLQPLKKNAV*MSTNQD
Trigger: ATCCTGATTGGTTGACATCAAAACAGCATTCTTCTT...CAGAGGCTGAAGTGAAGTTACAAAGTTATACTCCTGTGTAAATGAGGACTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296121.6
ENST00000627745.2