RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIAA0753 (Homo sapiens)

Ensembl gene IDs: ENSG00000198920

Ensembl transcript IDs: ENST00000361413.8, ENST00000542826.6, ENST00000570455.1, ENST00000570790.5, ENST00000571642.5, ENST00000572235.1, ENST00000572370.5, ENST00000575027.1, ENST00000576823.1

Found 708 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTaGCACAAATGGCCTCGCCTCAGAGAGCCTTTATGTAGCAGCCTC +
Preference number: 1 (lower is better)
Translates to: FLWAKTKGGAIPSPV*HKWPRLREPLCSSL
Trigger: GAGGCTGCTACATAAAGGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR TCA 90 bp TCCTTACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACTaGGTGACAAACATCTGTAAGGCCCGAATGGCTCCTCGATGGGCA +
Preference number: 1 (lower is better)
Translates to: SLHRAGSGCSPRSVN*VTNICKARMAPRWA
Trigger: TGCCCATCGAGGAGCCATTCGGGCCTTACAGATGTTTGTCACTCAGTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGTAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
3UTR TCA 90 bp TGGGAATGTGTCCTTTGCTGTGAGGGGCCTCCTCTCACCCTTTGGTaGTGTACTTGGCCATCTCTCCAAGGCCTTTTGGCTACCGATAGG +
Preference number: 1 (lower is better)
Translates to: WECVLCCEGPPLTLW*CTWPSLQGLLATDR
Trigger: CCTATCGGTAGCCAAAAGGCCTTGGAGAGATGGCCAAGTACATCACCAAAGGGTGAGAGGAGGCCCCTCACAGCAAAGGACACATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR CCA 90 bp AAATGCAAAGTGAGGATGACCTCCCCGGCACTGCCTTCCTTTCAGTaGGCAGCACCTTCTGGGCCTGGATGGACAGCTGAGGATGAAAAT +
Preference number: 1 (lower is better)
Translates to: KCKVRMTSPALPSFQ*AAPSGPGWTAEDEN
Trigger: ATTTTCATCCTCAGCTGTCCATCCAGGCCCAGAAGGTGCTGCCCACTGAAAGGAAGGCAGTGCCGGGGAGGTCATCCTCACTTTGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
3UTR CCA 90 bp ATCGGCAAGAAGCTGCTTTGCTACAGAAGGTCGACTTGTTTCCTGTaGGAATGTGTCCTTTGCTGTGAGGGGCCTCCTCTCACCCTTTGG +
Preference number: 1 (lower is better)
Translates to: IGKKLLCYRRSTCFL*ECVLCCEGPPLTLW
Trigger: CCAAAGGGTGAGAGGAGGCCCCTCACAGCAAAGGACACATTCCCACAGGAAACAAGTCGACCTTCTGTAGCAAAGCAGCTTCTTGCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR TCA 90 bp TTCCCTGGGGGCGTCTCAGGCATTCTTTCTGCATGTTTCCTTCACTaGGCCTCAGGCTACGAATTGAGAGAAAGTCTTTCCAGGCAGTGG +
Preference number: 1 (lower is better)
Translates to: FPGGVSGILSACFLH*ASGYELRESLSRQW
Trigger: CCACTGCCTGGAAAGACTTTCTCTCAATTCGTAGCCTGAGGCTCAGTGAAGGAAACATGCAGAAAGAATGCCTGAGACGCCCCCAGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR TCA 90 bp CTACAGAAGGTCGACTTGTTTCCTGTGGGAATGTGTCCTTTGCTGTaGGGGGCCTCCTCTCACCCTTTGGTGATGTACTTGGCCATCTCT +
Preference number: 1 (lower is better)
Translates to: LQKVDLFPVGMCPLL*GASSHPLVMYLAIS
Trigger: AGAGATGGCCAAGTACATCACCAAAGGGTGAGAGGAGGCCCCTCACAGCAAAGGACACATTCCCACAGGAAACAAGTCGACCTTCTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR CCA 90 bp GGAACAGAAGGGTCTGCATCCAGCTTGACAGAACAAAGTGAAAGCTaGCGAATAAGGCTGCCCAGTTCCTTACACCGAGCAGGAAGTGGA +
Preference number: 1 (lower is better)
Translates to: GTEGSASSLTEQSES*RIRLPSSLHRAGSG
Trigger: TCCACTTCCTGCTCGGTGTAAGGAACTGGGCAGCCTTATTCGCCAGCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCCTTCTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
3UTR TCA 90 bp CGCCATCCATCTGTTCCCTACTCCCACTTGGGTTCCTTTGTGGTATaGAATAGAGACACTTCTGACCTCATCGGAGACACAGCGAGGTCT +
Preference number: 1 (lower is better)
Translates to: RHPSVPYSHLGSFVV*NRDTSDLIGDTARS
Trigger: AGACCTCGCTGTGTCTCCGATGAGGTCAGAAGTGTCTCTATTTCATACCACAAAGGAACCCAAGTGGGAGTAGGGAACAGATGGATGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR CCA 90 bp CTTCGCGCCATCCATCTGTTCCCTACTCCCACTTGGGTTCCTTTGTaGTATGAAATAGAGACACTTCTGACCTCATCGGAGACACAGCGA +
Preference number: 1 (lower is better)
Translates to: LRAIHLFPTPTWVPL*YEIETLLTSSETQR
Trigger: TCGCTGTGTCTCCGATGAGGTCAGAAGTGTCTCTATTTCATACCACAAAGGAACCCAAGTGGGAGTAGGGAACAGATGGATGGCGCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR CCA 90 bp CCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTaGGGGCGTCTCAGGCATTCTTTCTGCATGTTTCCTTCACTGAGC +
Preference number: 1 (lower is better)
Translates to: PDDGTGQVIKSSLIP*GRLRHSFCMFPSLS
Trigger: GCTCAGTGAAGGAAACATGCAGAAAGAATGCCTGAGACGCCCCCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR CCA 90 bp AGACACAGAGGTCTTCGCGCCATCCATCTGTTCCCTACTCCCACTTaGGTTCCTTTGTGGTATGAAATAGAGACACTTCTGACCTCATCG +
Preference number: 1 (lower is better)
Translates to: RHRGLRAIHLFPTPT*VPLWYEIETLLTSS
Trigger: CGATGAGGTCAGAAGTGTCTCTATTTCATACCACAAAGGAACCCAAGTGGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR GCA 90 bp ATAAAGAGTTCCCTTATTCCCTGGGGGCGTCTCAGGCATTCTTTCTaGATGTTTCCTTCACTGAGCCTCAGGCTACGAATTGAGAGAAAG +
Preference number: 1 (lower is better)
Translates to: IKSSLIPWGRLRHSF*MFPSLSLRLRIERK
Trigger: CTTTCTCTCAATTCGTAGCCTGAGGCTCAGTGAAGGAAACATGCAGAAAGAATGCCTGAGACGCCCCCAGGGAATAAGGGAACTCTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR TCA 90 bp GCATTCTTTCTGCATGTTTCCTTCACTGAGCCTCAGGCTACGAATTaGGAGAAAGTCTTTCCAGGCAGTGGCCTGATTCTTACGCACATT +
Preference number: 1 (lower is better)
Translates to: AFFLHVSFTEPQATN*EKVFPGSGLILTHI
Trigger: AATGTGCGTAAGAATCAGGCCACTGCCTGGAAAGACTTTCTCTCAATTCGTAGCCTGAGGCTCAGTGAAGGAAACATGCAGAAAGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR TCA 90 bp GCAGGCTGGGCTTTCGCTGTGTTTACTGACGAGCCATCTTTCAAATaGATATTTGCTTCTGTAGTAGAATTGACTCTCTGGGCCTTGACC +
Preference number: 1 (lower is better)
Translates to: AGWAFAVFTDEPSFK*IFASVVELTLWALT
Trigger: GGTCAAGGCCCAGAGAGTCAATTCTACTACAGAAGCAAATATTCATTTGAAAGATGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR CCA 90 bp ATGGTGCCTTGCGGTCTTTCACAGGCTGCCGGTTCATTTTTAATCTaGATGAAACTGTTGTCTGCTGCACTCTGCTTTTACTGTGAGGTT +
Preference number: 1 (lower is better)
Translates to: MVPCGLSQAAGSFLI*MKLLSAALCFYCEV
Trigger: AACCTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAAAAATGAACCGGCAGCCTGTGAAAGACCGCAAGGCACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR TCA 90 bp TTTAATCTGGATGAAACTGTTGTCTGCTGCACTCTGCTTTTACTGTaGGGTTGGCTTTGTCTACCTCTTTCAGCTTTGCGGAGTCCTTGC +
Preference number: 1 (lower is better)
Translates to: FNLDETVVCCTLLLL*GWLCLPLSALRSPC
Trigger: GCAAGGACTCCGCAAAGCTGAAAGAGGTAGACAAAGCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR GCA 90 bp GCCGGTTCATTTTTAATCTGGATGAAACTGTTGTCTGCTGCACTCTaGTTTTACTGTGAGGTTGGCTTTGTCTACCTCTTTCAGCTTTGC +
Preference number: 1 (lower is better)
Translates to: AGSFLIWMKLLSAAL*FYCEVGFVYLFQLC
Trigger: GCAAAGCTGAAAGAGGTAGACAAAGCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAAAAATGAACCGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR GCA 90 bp AGGAAAAGTACACATTCTGAAAATATTGCCATAATCAAGTTGTGTTaGCTGGGCACTGATAAGTGTGATACATTGCATCATACATTTCCA +
Preference number: 1 (lower is better)
Translates to: RKSTHSENIAIIKLC*LGTDKCDTLHHTFP
Trigger: TGGAAATGTATGATGCAATGTATCACACTTATCAGTGCCCAGGCAACACAACTTGATTATGGCAATATTTTCAGAATGTGTACTTTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
3UTR-3UTR CCA 90 bp ATCAAGCTCACTCTGCAACCTCTGGGTCTCCGGAAGCTCCGTATCGGGCTGATACGAATGGCTCCTCGATaGGCAGCCGCCAGCTTAGAC +
Preference number: 2 (lower is better)
Translates to: IKLTLQPLGLRKLRIGLIRMAPR*AAASLD
Trigger: GTCTAAGCTGGCGGCTGCCCATCGAGGAGCCATTCG...TATCAGCCCGATACGGAGCTTCCGGAGACCCAGAGGTTGCAGAGTGAGCTTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR CCA 90 bp GCTCCTCGATGGGCAGCCGCCAGCTTAGACATTGCCCATGACTTTCCATTGATCTCTGTAAGGCCCGAATaGCTCCTCGATGGGCAGCCG +
Preference number: 2 (lower is better)
Translates to: APRWAAASLDIAHDFPLISVRPE*LLDGQP
Trigger: CGGCTGCCCATCGAGGAGCCATTCGGGCCTTACAGA...GATCAATGGAAAGTCATGGGCAATGTCTAAGCTGGCGGCTGCCCATCGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572235.1
3UTR-3UTR GCA 90 bp GCTGCAACCTCCTGTGCAGGCTGGGCTTTCGCTGTGTTTACTGACGAGCCATCTGTATCCATGGTGCCTTaGGGTCTTTCACAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: AATSCAGWAFAVFTDEPSVSMVP*GLSQAA
Trigger: GGCAGCCTGTGAAAGACCGCAAGGCACCATGGATAC...AGATGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR GCA 90 bp ACAGCTGCAACCTCCTGTGCAGGCTGGGCTTTCGCTGTGTTTACTGACGAGCCAAGCCTGGCTGCTTCATaGTCAACAGCACCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: TAATSCAGWAFAVFTDEPSLAAS*STAPVR
Trigger: CCTGACAGGTGCTGTTGAGCATGAAGCAGCCAGGCT...TGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp TCTGCAACCTCTGGGTCTCCGGAAGCTCCGTATCGGGCTGATACTTATCGGCAAACACCGAGCAGGAAGTaGATGCTCCCCTCGGTCAGT +
Preference number: 2 (lower is better)
Translates to: SATSGSPEAPYRADTYRQTPSRK*MLPSVS
Trigger: ACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGT...TTGCCGATAAGTATCAGCCCGATACGGAGCTTCCGGAGACCCAGAGGTTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR GCA 90 bp CTCTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCGTATCCATGGTGCCTTaGGGTCTTTCACAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: LWALTKRGFKRSRTASSTVSMVP*GLSQAA
Trigger: GGCAGCCTGTGAAAGACCGCAAGGCACCATGGATAC...GGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR GCA 90 bp AGTCACCGATGCTGTGCTGCATACCCGGTGGGACAAAGAGGGGAGCTCGGCCTTTTCAAAATCAACAGCTaGAACCTCCTGTGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: SHRCCAAYPVGQRGELGLFKINS*NLLCRL
Trigger: CAGCCTGCACAGGAGGTTGCAGCTGTTGATTTTGAA...AAGGCCGAGCTCCCCTCTTTGTCCCACCGGGTATGCAGCACAGCATCGGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp CTGCCCAGTTCCTTACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACGGCCAAAACAAAGGGTaGTGCCATCCCTTCTCCAGT +
Preference number: 2 (lower is better)
Translates to: LPSSLHRAGSGCSPRSVNGQNKG*CHPFSS
Trigger: ACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC...GTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGTAAGGAACTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR CCA 90 bp GGGCTATCCTTGCTGTCCTCAACGGTGGCTAAGGTTTCAGACCCCAAGATCTTATCTGTAAGGCCCGAATaGCTCCTCGATGGGCAGCCG +
Preference number: 2 (lower is better)
Translates to: GLSLLSSTVAKVSDPKILSVRPE*LLDGQP
Trigger: CGGCTGCCCATCGAGGAGCCATTCGGGCCTTACAGA...TAAGATCTTGGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCAAGGATAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR TCA 90 bp AGTCACCGATGCTGTGCTGCATACCCGGTGGGACAAAGAGGGGAGCTCGGCCTTACTCTGCTTTTACTGTaGGGTTGGCTTTGTCTACCT +
Preference number: 2 (lower is better)
Translates to: SHRCCAAYPVGQRGELGLTLLLL*GWLCLP
Trigger: AGGTAGACAAAGCCAACCTCACAGTAAAAGCAGAGT...AAGGCCGAGCTCCCCTCTTTGTCCCACCGGGTATGCAGCACAGCATCGGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR GCA 90 bp CTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTTGGGAATGTGTCCTTTaGTGTGAGGGGCCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: LGLDQERLQTIQNCLLYLWECVL*CEGPPL
Trigger: GAGAGGAGGCCCCTCACAGCAAAGGACACATTCCCA...AAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR CCA 90 bp ACACTTCTGACCTCATCGGAGACACAGCGAGGTCTGTACCTTCACCCAGGCACACAGGGGGCTCCTGTTTaGAATAAACTGCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: TLLTSSETQRGLYLHPGTQGAPV*NKLQQR
Trigger: CCTCTGCTGCAGTTTATTCCAAACAGGAGCCCCCTG...TGTGCCTGGGTGAAGGTACAGACCTCGCTGTGTCTCCGATGAGGTCAGAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR CAA 90 bp CCTGGCTGCTTCATGCTCAACAGCACCTGTCAGGTGACTTTCCTCTaGAGGATCTTCTTGCTGGAGAGGCTCTTTTGTGGCATCTCTGGG +
Preference number: 2 (lower is better)
Translates to: PGCFMLNSTCQVTFL*RIFLLERLFCGISG
Trigger: CCCAGAGATGCCACAAAAGAGCCTCTCCAGCAAGAAGATCCTCAAGAGGAAAGTCACCTGACAGGTGCTGTTGAGCATGAAGCAGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp ACAGCTGCAACCTCCTGTGCAGGCTGGGCTTTCGCTGTGTTTACTGACGAGCCACAGCCTCATGAGATATaGTCCGAAGGTACTGCTCAA +
Preference number: 2 (lower is better)
Translates to: TAATSCAGWAFAVFTDEPQPHEI*SEGTAQ
Trigger: TTGAGCAGTACCTTCGGATCATATCTCATGAGGCTG...TGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCGAGCCTACAGCCTCATaGGATATGATCCGAAGGTAC +
Preference number: 2 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLAEPTAS*DMIRRY
Trigger: GTACCTTCGGATCATATCTCATGAGGCTGTAGGCTC...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp GTTTGGGGGTATCCATGGTGCCTTGCGGTCTTTCACAGGCTGCCGGTTCATTTTCCTCTCACCCTTTGGTaGTGTACTTGGCCATCTCTC +
Preference number: 2 (lower is better)
Translates to: VWGYPWCLAVFHRLPVHFPLTLW*CTWPSL
Trigger: GAGAGATGGCCAAGTACATCACCAAAGGGTGAGAGG...AAAATGAACCGGCAGCCTGTGAAAGACCGCAAGGCACCATGGATACCCCCAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR GCA 90 bp GGGCTATCCTTGCTGTCCTCAACGGTGGCTAAGGTTTCAGACCCCAAGATCTTATGGGGGTATCCATGGTaGCTTGCGGTCTTTCACAGG +
Preference number: 2 (lower is better)
Translates to: GLSLLSSTVAKVSDPKILWGYPW*LAVFHR
Trigger: CCTGTGAAAGACCGCAAGGCACCATGGATACCCCCA...TAAGATCTTGGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCAAGGATAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCGTAGAATTGACTCTCTaGGCCTTGACCAAGAGAGGC +
Preference number: 2 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLAVELTL*ALTKRG
Trigger: GCCTCTCTTGGTCAAGGCCCAGAGAGTCAATTCTAC...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp CGATGCTGTGCTGCATACCCGGTGGGACAAAGAGGGGAGCTCGGCCTTCTTTCTACTGAGCCAGAGGAATaGACATGGTATTTCAATAGG +
Preference number: 2 (lower is better)
Translates to: RCCAAYPVGQRGELGLLSTEPEE*TWYFNR
Trigger: CCTATTGAAATACCATGTTCATTCCTCTGGCTCAGT...AGAAAGAAGGCCGAGCTCCCCTCTTTGTCCCACCGGGTATGCAGCACAGCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR TCA 90 bp GCAGCCACAGCACCCAGAGCTTCATCTACCAGCTCTTCTGAAAAGCTTTCAGCTCCCAAGATCTTAGCATaGGTCACAGCCCAGAGCTCA +
Preference number: 2 (lower is better)
Translates to: AATAPRASSTSSSEKLSAPKILA*VTAQSS
Trigger: TGAGCTCTGGGCTGTGACTCATGCTAAGATCTTGGG...AGCTGAAAGCTTTTCAGAAGAGCTGGTAGATGAAGCTCTGGGTGCTGTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp CTGCCCAGTTCCTTACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACCCTCGGTCAGTAAACTaGGTGACAAACATCTGTAAG +
Preference number: 2 (lower is better)
Translates to: LPSSLHRAGSGCSPRSVNPRSVN*VTNICK
Trigger: CTTACAGATGTTTGTCACTCAGTTTACTGACCGAGG...GTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGTAAGGAACTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
3UTR-3UTR GCA 90 bp CTTTCTCTGGGGAGACACAGAGGTCTTCGCGCCATCCATCTGTTCCCTACTCCCCTGTTTGGAATAAACTaGAGCAGAGGAGAGGTTTGG +
Preference number: 2 (lower is better)
Translates to: LSLGRHRGLRAIHLFPTPLFGIN*SRGEVW
Trigger: CCAAACCTCTCCTCTGCTGCAGTTTATTCCAAACAG...GGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGTGTCTCCCCAGAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR GCA 90 bp CTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTCAAACGATCCAGAACTaGCTCCTCTACCTTGTCTGC +
Preference number: 2 (lower is better)
Translates to: LGLDQERLQTIQNCLLYLQTIQN*LLYLVC
Trigger: GCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTG...AAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR GCA 90 bp CTTCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTACAGGGCCTTTCTAAGCTGCAACCTCCTGTaGAGGCTGGGCTTTCGCTGT +
Preference number: 2 (lower is better)
Translates to: LPLFPHFHPGNCHYRAFLSCNLL*RLGFRC
Trigger: ACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGCT...TAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR GCA 90 bp CTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGAGTCCTTGCTGTCTTaGTGGCGCCAGAGTATCTTT +
Preference number: 2 (lower is better)
Translates to: LGLDQERLQTIQNCLLYLESLLS*WRQSIF
Trigger: AAAGATACTCTGGCGCCAGCAAGACAGCAAGGACTC...AAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR CCA 90 bp CTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCACATTTAGGAGACGCTaGTGGGGATGTGGGGTTTGG +
Preference number: 2 (lower is better)
Translates to: LDQERLQTIQNCLLYLVCTFRRR*WGCGVW
Trigger: CCAAACCCCACATCCCCACCAGCGTCTCCTAAATGT...GCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp TCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCTTTATGTAGCAACCTCCTGTGCAGGCTaGGCTTTCGCTGTGTTTACT +
Preference number: 2 (lower is better)
Translates to: SLLQCDTNGLASESLYVATSCAG*AFAVFT
Trigger: AGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGT...TGCTACATAAAGGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp GCAGCCACAGCACCCAGAGCTTCATCTACCAGCTCTTCTGAAAAGCTTTCAGCTTGCTGTCCTCAACGGTaGCTAAGGTTTCAGACCCCA +
Preference number: 2 (lower is better)
Translates to: AATAPRASSTSSSEKLSACCPQR*LRFQTP
Trigger: TGGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCA...AGCTGAAAGCTTTTCAGAAGAGCTGGTAGATGAAGCTCTGGGTGCTGTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp TGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCTTTATGCATGATCTCCAGATCTaGGCTATCCTTGCTGTCCTC +
Preference number: 2 (lower is better)
Translates to: CHPFSSVTQMASPQRAFMHDLQI*AILAVL
Trigger: GAGGACAGCAAGGATAGCCCAGATCTGGAGATCATG...CATAAAGGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR CAA 90 bp GGTCTTCGCGCCATCCATCTGTTCCCTACTCCCACTTGGGTTCCTTaGTGGTATGAAATAGAGACACTTCTGACCTCATCGGAGACACAG +
Preference number: 2 (lower is better)
Translates to: GLRAIHLFPTPTWVP*WYEIETLLTSSETQ
Trigger: CTGTGTCTCCGATGAGGTCAGAAGTGTCTCTATTTCATACCACAAAGGAACCCAAGTGGGAGTAGGGAACAGATGGATGGCGCGAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR TCA 90 bp GGCTACGAATTGAGAGAAAGTCTTTCCAGGCAGTGGCCTGATTCTTACGCACATAGACTGTGCTCTCCCTaGGTCTACAGCCTAGTAGGG +
Preference number: 2 (lower is better)
Translates to: GYELRESLSRQWPDSYAHRLCSP*VYSLVG
Trigger: CCCTACTAGGCTGTAGACTCAGGGAGAGCACAGTCT...ATGTGCGTAAGAATCAGGCCACTGCCTGGAAAGACTTTCTCTCAATTCGTAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR TCA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCCATTCGGCGCATCATaGTCTCCAGATCTGGGCTAT +
Preference number: 2 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLPFGAS*SPDLGY
Trigger: ATAGCCCAGATCTGGAGATCATGATGCGCCGAATGG...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR GCA 90 bp TGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCTTTATGTTCAAAATCAACAGCTaGAACCTCCTGTGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: CHPFSSVTQMASPQRAFMFKINS*NLLCRL
Trigger: CAGCCTGCACAGGAGGTTGCAGCTGTTGATTTTGAA...CATAAAGGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR GCA 90 bp TCTGTAGTAGAATTGACTCTCTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCCGAGCAGGAAGTGGATaGTCCCCTCGGTCAGTAAAC +
Preference number: 2 (lower is better)
Translates to: SVVELTLWALTKRGFKRSRAGSG*SPRSVN
Trigger: GTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCG...GGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAGAGAGTCAATTCTACTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR CCA 90 bp GAATGGAACGTTGAAGAAATGTGTGTCTATTATTGTGCACTGACAGCCAGGGGGCTGCCTTCCTTTCAGTaGGCAGCACCTTCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: EWNVEEMCVYYCALTARGLPSFQ*AAPSGP
Trigger: AGGCCCAGAAGGTGCTGCCCACTGAAAGGAAGGCAG...CCCCCTGGCTGTCAGTGCACAATAATAGACACACATTTCTTCAACGTTCCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR CCA 90 bp CTGCATAATCTTCGCACATATCCTGAAGTTCAGCAGCCACAGCACCCAGAGCTTGTTTGGGGGTATCCATaGTGCCTTGCGGTCTTTCAC +
Preference number: 2 (lower is better)
Translates to: LHNLRTYPEVQQPQHPELVWGYP*CLAVFH
Trigger: GTGAAAGACCGCAAGGCACCATGGATACCCCCAAAC...AAGCTCTGGGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAGATTATGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp TCATCCAGGGAATTGCCATTACAGGGCCTTTCTAACATGATGTTCACGGCTGGACAAGCCAAGCGAGCCTaGCTGCTTCATGCTCAACAG +
Preference number: 2 (lower is better)
Translates to: SSRELPLQGLSNMMFTAGQAKRA*LLHAQQ
Trigger: CTGTTGAGCATGAAGCAGCCAGGCTCGCTTGGCTTG...TCCAGCCGTGAACATCATGTTAGAAAGGCCCTGTAATGGCAATTCCCTGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp GCAGCCACAGCACCCAGAGCTTCATCTACCAGCTCTTCTGAAAAGCTTTCAGCTGTAGAATTGACTCTCTaGGCCTTGACCAAGAGAGGC +
Preference number: 2 (lower is better)
Translates to: AATAPRASSTSSSEKLSAVELTL*ALTKRG
Trigger: GCCTCTCTTGGTCAAGGCCCAGAGAGTCAATTCTAC...AGCTGAAAGCTTTTCAGAAGAGCTGGTAGATGAAGCTCTGGGTGCTGTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp GAGAATCTTCGGCTAGGGAGAGAAGAGGGGCCTCTCTTTTCTCTGATCCTTCCTCATGATGTTCACGGCTaGATCCTTGCGATCCACTGT +
Preference number: 2 (lower is better)
Translates to: ENLRLGREEGPLFSLILPHDVHG*ILAIHC
Trigger: ACAGTGGATCGCAAGGATCCAGCCGTGAACATCATG...AGGAAGGATCAGAGAAAAGAGAGGCCCCTCTTCTCTCCCTAGCCGAAGATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp CTTCGCACATATCCTGAAGTTCAGCAGCCACAGCACCCAGAGCTTCATCTACCACATGATGTTCACGGCTaGATCCTTGCGATCCACTGT +
Preference number: 2 (lower is better)
Translates to: LRTYPEVQQPQHPELHLPHDVHG*ILAIHC
Trigger: ACAGTGGATCGCAAGGATCCAGCCGTGAACATCATG...TGGTAGATGAAGCTCTGGGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR CAA 90 bp ATCTCTTCCATTCGGCGCATCATGATCTCCAGATCTGGGCTATCCTaGCTGTCCTCAACGGTGGCTAAGGTTTCAGACCCCAAGATCTTA +
Preference number: 2 (lower is better)
Translates to: ISSIRRIMISRSGLS*LSSTVAKVSDPKIL
Trigger: TAAGATCTTGGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCAAGGATAGCCCAGATCTGGAGATCATGATGCGCCGAATGGAAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGGGCCTGGTCCTCTCCTaGTTCCTCAAACTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWGLVLS*FLKLPL
Trigger: CAGAGGAAGTTTGAGGAATCAGGAGAGGACCAGGCC...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR TCA 90 bp GTTTGGGGGTATCCATGGTGCCTTGCGGTCTTTCACAGGCTGCCGGTTCATTTTACTCTGCTTTTACTGTaGGGTTGGCTTTGTCTACCT +
Preference number: 2 (lower is better)
Translates to: VWGYPWCLAVFHRLPVHFTLLLL*GWLCLP
Trigger: AGGTAGACAAAGCCAACCTCACAGTAAAAGCAGAGT...AAAATGAACCGGCAGCCTGTGAAAGACCGCAAGGCACCATGGATACCCCCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp CTTCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTACAGGGCCTTTCTACGGCCTTCTTTCTGTTaGGAATCTTCGGCTAGGGAG +
Preference number: 2 (lower is better)
Translates to: LPLFPHFHPGNCHYRAFLRPSFC*ESSARE
Trigger: CTCCCTAGCCGAAGATTCTCAACAGAAAGAAGGCCG...TAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp GAACAAAGTGAAAGCTGGCGAATAAGGCTGCCCAGTTCCTTACACCGAGCAGGAGGTCTGCATCCAGCTTaGCAGAACAAAGTGAAAGCT +
Preference number: 2 (lower is better)
Translates to: EQSESWRIRLPSSLHRAGGLHPA*QNKVKA
Trigger: AGCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACC...TCCTGCTCGGTGTAAGGAACTGGGCAGCCTTATTCGCCAGCTTTCACTTTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
3UTR-3UTR TCA 90 bp GCTCCTCGATGGGCAGCCGCCAGCTTAGACATTGCCCATGACTTTCCATTGATCAATAGGAATTTAGCATaGAGGAGTGAAGGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: APRWAAASLDIAHDFPLINRNLA*RSEGGG
Trigger: ACCTCCACCTTCACTCCTTCATGCTAAATTCCTATT...GATCAATGGAAAGTCATGGGCAATGTCTAAGCTGGCGGCTGCCCATCGAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572235.1
3UTR-3UTR GCA 90 bp GCAGCCACAGCACCCAGAGCTTCATCTACCAGCTCTTCTGAAAAGCTTTCAGCTAGGAACAGAAGGGTCTaGATCCAGCTTGACAGAACA +
Preference number: 2 (lower is better)
Translates to: AATAPRASSTSSSEKLSARNRRV*IQLDRT
Trigger: TGTTCTGTCAAGCTGGATGCAGACCCTTCTGTTCCT...AGCTGAAAGCTTTTCAGAAGAGCTGGTAGATGAAGCTCTGGGTGCTGTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR CCA 90 bp TCTGTAGTAGAATTGACTCTCTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCGTTTGGGGGTATCCATaGTGCCTTGCGGTCTTTCAC +
Preference number: 2 (lower is better)
Translates to: SVVELTLWALTKRGFKRSVWGYP*CLAVFH
Trigger: GTGAAAGACCGCAAGGCACCATGGATACCCCCAAAC...GGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAGAGAGTCAATTCTACTACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp ATGAGATATGATCCGAAGGTACTGCTCAAAACGACTACAGTAGTCACCGATGCTTTTAGGAGACGCTGGTaGGGATGTGGGGTTTGGGGG +
Preference number: 2 (lower is better)
Translates to: MRYDPKVLLKTTTVVTDAFRRRW*GCGVWG
Trigger: CCCCCAAACCCCACATCCCCACCAGCGTCTCCTAAA...AGCATCGGTGACTACTGTAGTCGTTTTGAGCAGTACCTTCGGATCATATCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp ACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACTGAGTGACAAACATGAACAAAGTGAAAGCTaGCGAATAAGGCTGCCCAGT +
Preference number: 2 (lower is better)
Translates to: TPSRKWMLPSVSKLSDKHEQSES*RIRLPS
Trigger: ACTGGGCAGCCTTATTCGCCAGCTTTCACTTTGTTC...ATGTTTGTCACTCAGTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
3UTR-3UTR CCA 90 bp GGGCTATCCTTGCTGTCCTCAACGGTGGCTAAGGTTTCAGACCCCAAGATCTTATCCTTGCTGTCTTGCTaGCGCCAGAGTATCTTTCTT +
Preference number: 2 (lower is better)
Translates to: GLSLLSSTVAKVSDPKILSLLSC*RQSIFL
Trigger: AAGAAAGATACTCTGGCGCCAGCAAGACAGCAAGGA...TAAGATCTTGGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCAAGGATAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR TCA 90 bp CTTTTCTCTGATCCTTCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTAATCCCTTCTCCAGTGTaGCACAAATGGCCTCGCCTC +
Preference number: 2 (lower is better)
Translates to: LFSDPSSVPTLSSRELPLIPSPV*HKWPRL
Trigger: GAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGAT...TAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAGGATCAGAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp CTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTTTTCGCTGTGTTTACTaGCGAGCCATCTTTCAAATG +
Preference number: 2 (lower is better)
Translates to: LGLDQERLQTIQNCLLYLFRCVY*RAIFQM
Trigger: CATTTGAAAGATGGCTCGTCAGTAAACACAGCGAAA...AAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp ACAGCTGCAACCTCCTGTGCAGGCTGGGCTTTCGCTGTGTTTACTGACGAGCCACTTAGACATTGCCCATaGCTTCTTAGTGTGTTTAAT +
Preference number: 2 (lower is better)
Translates to: TAATSCAGWAFAVFTDEPLRHCP*LLSVFN
Trigger: ATTAAACACACTAAGAAGTCATGGGCAATGTCTAAG...TGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR GCA 90 bp TCACCCTTTGGTGATGTACTTGGCCATCTCTCCAAGGCCTTTTGGCTACCGATATTGTCTGCTGCACTCTaGTTTTACTGTGAGGTTGGC +
Preference number: 2 (lower is better)
Translates to: SPFGDVLGHLSKAFWLPILSAAL*FYCEVG
Trigger: GCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAA...TATCGGTAGCCAAAAGGCCTTGGAGAGATGGCCAAGTACATCACCAAAGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR CAA 90 bp TTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTaGTCTGCTAAGTGGGTGGCAGAAACACTCAATTGTTGGAGTCTA +
Preference number: 2 (lower is better)
Translates to: LTKRGFKRSRTASST*SAKWVAETLNCWSL
Trigger: TAGACTCCAACAATTGAGTGTTTCTGCCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp TCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCTTTATGTAGCATTTCGCTGTGTTTACTaGCGAGCCATCTTTCAAATG +
Preference number: 2 (lower is better)
Translates to: SLLQCDTNGLASESLYVAFRCVY*RAIFQM
Trigger: CATTTGAAAGATGGCTCGTCAGTAAACACAGCGAAA...TGCTACATAAAGGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp CTTTTCTCTGATCCTTCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTAAGCTCCGTATCGGGCTaGTACTTATCGGCAAGAAGC +
Preference number: 2 (lower is better)
Translates to: LFSDPSSVPTLSSRELPLSSVSG*YLSARS
Trigger: GCTTCTTGCCGATAAGTATCAGCCCGATACGGAGCT...TAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAGGATCAGAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR GCA 90 bp GCAGCCACAGCACCCAGAGCTTCATCTACCAGCTCTTCTGAAAAGCTTTCAGCTGATGAAACTGTTGTCTaGTGCACTCTGCTTTTACTG +
Preference number: 2 (lower is better)
Translates to: AATAPRASSTSSSEKLSADETVV*CTLLLL
Trigger: CAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATC...AGCTGAAAGCTTTTCAGAAGAGCTGGTAGATGAAGCTCTGGGTGCTGTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR GCA 90 bp GAACAAAGTGAAAGCTGGCGAATAAGGCTGCCCAGTTCCTTACACCGAGCAGGAGCCTCTGTTTTTGCATaGTGTCAATTTCCTTGGCTT +
Preference number: 2 (lower is better)
Translates to: EQSESWRIRLPSSLHRAGASVFA*CQFPWL
Trigger: AAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGC...TCCTGCTCGGTGTAAGGAACTGGGCAGCCTTATTCGCCAGCTTTCACTTTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR GCA 90 bp CTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTTCAAGCCTCTGTTTTTaGATGCTGTCAATTTCCTTG +
Preference number: 2 (lower is better)
Translates to: LGLDQERLQTIQNCLLYLSSLCF*MLSISL
Trigger: CAAGGAAATTGACAGCATGCAAAAACAGAGGCTTGA...AAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR GCA 90 bp TATTTTTCCATCTCTTCCATTCGGCGCATCATGATCTCCAGATCTGGGCTATCCCAAACGATCCAGAACTaGCTCCTCTACCTTGTCTGC +
Preference number: 2 (lower is better)
Translates to: YFSISSIRRIMISRSGLSQTIQN*LLYLVC
Trigger: GCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTG...GGATAGCCCAGATCTGGAGATCATGATGCGCCGAATGGAAGAGATGGAAAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR GCA 90 bp CTTTTCTCTGATCCTTCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTAGATCTGGGCTATCCTTaGTGTCCTCAACGGTGGCTA +
Preference number: 2 (lower is better)
Translates to: LFSDPSSVPTLSSRELPLDLGYP*CPQRWL
Trigger: TAGCCACCGTTGAGGACAGCAAGGATAGCCCAGATC...TAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAGGATCAGAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp ACAGAGGTCTTCGCGCCATCCATCTGTTCCCTACTCCCACTTGGGTTCCTTTGTCTAGGAATGGAACGTTaGAGAAATGTGTGTCTATTA +
Preference number: 2 (lower is better)
Translates to: TEVFAPSICSLLPLGFLCLGMER*RNVCLL
Trigger: TAATAGACACACATTTCTTCAACGTTCCATTCCTAG...ACAAAGGAACCCAAGTGGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR GCA 90 bp AGCCAATCAAGCCTCTGTTTTTGCATGCTGTCAATTTCCTTGGCTTTTAACTCTAGCCTGGCTGCTTCATaGTCAACAGCACCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: SQSSLCFCMLSISLAFNSSLAAS*STAPVR
Trigger: CCTGACAGGTGCTGTTGAGCATGAAGCAGCCAGGCT...AGAGTTAAAAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGCTTGATTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR GCA 90 bp CCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTTGACGAACAGACTCCCAAGCGAGCCTGGCTaGTTCATGCTCAACAGCACC +
Preference number: 2 (lower is better)
Translates to: PKSRISICDFIISLTNRLPSEPG*FMLNST
Trigger: GGTGCTGTTGAGCATGAAGCAGCCAGGCTCGCTTGG...GAGTCTGTTCGTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR GCA 90 bp TATTTTTCCATCTCTTCCATTCGGCGCATCATGATCTCCAGATCTGGGCTATCCGGCAAGAAGCTGCTTTaGTACAGAAGGTCGACTTGT +
Preference number: 2 (lower is better)
Translates to: YFSISSIRRIMISRSGLSGKKLL*YRRSTC
Trigger: ACAAGTCGACCTTCTGTAGCAAAGCAGCTTCTTGCC...GGATAGCCCAGATCTGGAGATCATGATGCGCCGAATGGAAGAGATGGAAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR CCA 90 bp CCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTTGACGAACAGACTCTTTAGGAGACGCTGGTaGGGATGTGGGGTTTGGGGG +
Preference number: 2 (lower is better)
Translates to: PKSRISICDFIISLTNRLFRRRW*GCGVWG
Trigger: CCCCCAAACCCCACATCCCCACCAGCGTCTCCTAAA...GAGTCTGTTCGTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp GCAGCCACAGCACCCAGAGCTTCATCTACCAGCTCTTCTGAAAAGCTTTCAGCTGCTGACGAATGTTGTTaGATTCAAAATCAACAGCTG +
Preference number: 2 (lower is better)
Translates to: AATAPRASSTSSSEKLSAADECC*IQNQQL
Trigger: CAGCTGTTGATTTTGAATCCAACAACATTCGTCAGC...AGCTGAAAGCTTTTCAGAAGAGCTGGTAGATGAAGCTCTGGGTGCTGTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp TCCAGAACTATATCCGCATCTAATACATCAAGCTCACTCTGCAACCTCTGGGTCGAACAAAGTGAAAGCTaGCGAATAAGGCTGCCCAGT +
Preference number: 2 (lower is better)
Translates to: SRTISASNTSSSLCNLWVEQSES*RIRLPS
Trigger: ACTGGGCAGCCTTATTCGCCAGCTTTCACTTTGTTC...GACCCAGAGGTTGCAGAGTGAGCTTGATGTATTAGATGCGGATATAGTTCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR CAA 90 bp GGTCTTTCACAGGCTGCCGGTTCATTTTTAATCTGGATGAAACTGTaGTCTGCTGCACTCTGCTTTTACTGTGAGGTTGGCTTTGTCTAC +
Preference number: 2 (lower is better)
Translates to: GLSQAAGSFLIWMKL*SAALCFYCEVGFVY
Trigger: GTAGACAAAGCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAAAAATGAACCGGCAGCCTGTGAAAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp AGCTTAAATCACCTGAAATTCTTGTACTTCAGAGAAAAATCCCAGATGACGGCAATCCCTTCTCCAGTGTaGCACAAATGGCCTCGCCTC +
Preference number: 2 (lower is better)
Translates to: SLNHLKFLYFREKSQMTAIPSPV*HKWPRL
Trigger: GAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGAT...TGCCGTCATCTGGGATTTTTCTCTGAAGTACAAGAATTTCAGGTGATTTAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR GCA 90 bp TTGGAGTCTATACATTTCTTCAGCTTTGAGCTCATTCAGTTCCTTTGTTCTTCTCCAAGCGAGCCTGGCTaGTTCATGCTCAACAGCACC +
Preference number: 2 (lower is better)
Translates to: LESIHFFSFELIQFLCSSPSEPG*FMLNST
Trigger: GGTGCTGTTGAGCATGAAGCAGCCAGGCTCGCTTGG...AGAAGAACAAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTATAGACTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp CAAATGAATATTTGCTTCTGTAGTAGAATTGACTCTCTGGGCCTTGACCAAGAGACATTTAGGAGACGCTaGTGGGGATGTGGGGTTTGG +
Preference number: 2 (lower is better)
Translates to: QMNICFCSRIDSLGLDQETFRRR*WGCGVW
Trigger: CCAAACCCCACATCCCCACCAGCGTCTCCTAAATGT...CTCTTGGTCAAGGCCCAGAGAGTCAATTCTACTACAGAAGCAAATATTCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGACTGAGCCAGAGGAATaGACATGGTATTTCAATAGG +
Preference number: 2 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWTEPEE*TWYFNR
Trigger: CCTATTGAAATACCATGTTCATTCCTCTGGCTCAGT...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR GCA 90 bp GGCTACGAATTGAGAGAAAGTCTTTCCAGGCAGTGGCCTGATTCTTACGCACATATAATCAAGTTGTGTTaGCTGGGCACTGATAAGTGT +
Preference number: 2 (lower is better)
Translates to: GYELRESLSRQWPDSYAHIIKLC*LGTDKC
Trigger: ACACTTATCAGTGCCCAGGCAACACAACTTGATTAT...ATGTGCGTAAGAATCAGGCCACTGCCTGGAAAGACTTTCTCTCAATTCGTAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR GCA 90 bp TTGGAGTCTATACATTTCTTCAGCTTTGAGCTCATTCAGTTCCTTTGTTCTTCTTGGGGGTATCCATGGTaGCTTGCGGTCTTTCACAGG +
Preference number: 2 (lower is better)
Translates to: LESIHFFSFELIQFLCSSWGYPW*LAVFHR
Trigger: CCTGTGAAAGACCGCAAGGCACCATGGATACCCCCA...AGAAGAACAAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTATAGACTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR GCA 90 bp TATTTTTCCATCTCTTCCATTCGGCGCATCATGATCTCCAGATCTGGGCTATCCGCCTCTGTTTTTGCATaGTGTCAATTTCCTTGGCTT +
Preference number: 2 (lower is better)
Translates to: YFSISSIRRIMISRSGLSASVFA*CQFPWL
Trigger: AAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGC...GGATAGCCCAGATCTGGAGATCATGATGCGCCGAATGGAAGAGATGGAAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp TTTTGGTCATTGTTTTCTTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTCCTTCTGGGCCTGGATaGACAGCTGAGGATGAAAAT +
Preference number: 2 (lower is better)
Translates to: FWSLFSSCIQSRGSAYAIPSGPG*TAEDEN
Trigger: ATTTTCATCCTCAGCTGTCCATCCAGGCCCAGAAGG...AATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAACAATGACCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR CCA 90 bp TCTTTCACAGGCTGCCGGTTCATTTTTAATCTGGATGAAACTGTTGTCTGCTGCACCTTGTCTGCTAAGTaGGTGGCAGAAACACTCAAT +
Preference number: 2 (lower is better)
Translates to: SFTGCRFIFNLDETVVCCTLSAK*VAETLN
Trigger: ATTGAGTGTTTCTGCCACCCACTTAGCAGACAAGGT...GCAGCAGACAACAGTTTCATCCAGATTAAAAATGAACCGGCAGCCTGTGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp AGCTTAAATCACCTGAAATTCTTGTACTTCAGAGAAAAATCCCAGATGACGGCAGCATGTTTCCTTCACTaGGCCTCAGGCTACGAATTG +
Preference number: 2 (lower is better)
Translates to: SLNHLKFLYFREKSQMTAACFLH*ASGYEL
Trigger: CAATTCGTAGCCTGAGGCTCAGTGAAGGAAACATGC...TGCCGTCATCTGGGATTTTTCTCTGAAGTACAAGAATTTCAGGTGATTTAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR TCA 90 bp TTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTTGACGAGGGCCTTTCTAACATaGTGTTCACGGCTGGATCCT +
Preference number: 2 (lower is better)
Translates to: FLHPKSRISICDFIISLTRAFLT*CSRLDP
Trigger: AGGATCCAGCCGTGAACATCATGTTAGAAAGGCCCT...CGTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR GCA 90 bp TGGAACGTTGAAGAAATGTGTGTCTATTATTGTGCACTGACAGCCAGGGGGCTCCATTTCCAGAACCATTaGCATGACAAAAGAAAATGC +
Preference number: 2 (lower is better)
Translates to: WNVEEMCVYYCALTARGLHFQNH*HDKRKC
Trigger: GCATTTTCTTTTGTCATGGCAATGGTTCTGGAAATG...GAGCCCCCTGGCTGTCAGTGCACAATAATAGACACACATTTCTTCAACGTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR GCA 90 bp GTTTTCTTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTACAGTAGTCACCGATaGTGTGCTGCATACCCGGTG +
Preference number: 2 (lower is better)
Translates to: VFFLHPKSRISICDFIISYSSHR*CAAYPV
Trigger: CACCGGGTATGCAGCACAGCATCGGTGACTACTGTA...AGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp CAGCATATGCGATTTTATTATATCTTTGACGAACAGACTCCTGGTATTTTTCCACAAGCCAAGCGAGCCTaGCTGCTTCATGCTCAACAG +
Preference number: 2 (lower is better)
Translates to: QHMRFYYIFDEQTPGIFPQAKRA*LLHAQQ
Trigger: CTGTTGAGCATGAAGCAGCCAGGCTCGCTTGGCTTG...TGGAAAAATACCAGGAGTCTGTTCGTCAAAGATATAATAAAATCGCATATGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAAGGCCAAAACAAAGGGTaGTGCCATCCCTTCTCCAGT +
Preference number: 2 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEGQNKG*CHPFSS
Trigger: ACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
3UTR-3UTR CCA 90 bp AGCTTAAATCACCTGAAATTCTTGTACTTCAGAGAAAAATCCCAGATGACGGCAAGTCTTTCCAGGCAGTaGCCTGATTCTTACGCACAT +
Preference number: 2 (lower is better)
Translates to: SLNHLKFLYFREKSQMTASLSRQ*PDSYAH
Trigger: ATGTGCGTAAGAATCAGGCCACTGCCTGGAAAGACT...TGCCGTCATCTGGGATTTTTCTCTGAAGTACAAGAATTTCAGGTGATTTAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR CCA 90 bp CAAATGAATATTTGCTTCTGTAGTAGAATTGACTCTCTGGGCCTTGACCAAGAGACCTTGTCTGCTAAGTaGGTGGCAGAAACACTCAAT +
Preference number: 2 (lower is better)
Translates to: QMNICFCSRIDSLGLDQETLSAK*VAETLN
Trigger: ATTGAGTGTTTCTGCCACCCACTTAGCAGACAAGGT...CTCTTGGTCAAGGCCCAGAGAGTCAATTCTACTACAGAAGCAAATATTCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR TCA 90 bp GTTTTCTTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTCAGCCTCATGAGATATaGTCCGAAGGTACTGCTCAA +
Preference number: 2 (lower is better)
Translates to: VFFLHPKSRISICDFIISQPHEI*SEGTAQ
Trigger: TTGAGCAGTACCTTCGGATCATATCTCATGAGGCTG...AGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR GCA 90 bp AGCTTAAATCACCTGAAATTCTTGTACTTCAGAGAAAAATCCCAGATGACGGCATTGTGTTGGTATCAATaGCAGCAAGGGTTCAACAGC +
Preference number: 2 (lower is better)
Translates to: SLNHLKFLYFREKSQMTALCWYQ*QQGFNS
Trigger: GCTGTTGAACCCTTGCTGGCATTGATACCAACACAA...TGCCGTCATCTGGGATTTTTCTCTGAAGTACAAGAATTTCAGGTGATTTAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR GCA 90 bp AGCTTAAATCACCTGAAATTCTTGTACTTCAGAGAAAAATCCCAGATGACGGCACTCAGGCATTCTTTCTaGATGTTTCCTTCACTGAGC +
Preference number: 2 (lower is better)
Translates to: SLNHLKFLYFREKSQMTALRHSF*MFPSLS
Trigger: GCTCAGTGAAGGAAACATGCAGAAAGAATGCCTGAG...TGCCGTCATCTGGGATTTTTCTCTGAAGTACAAGAATTTCAGGTGATTTAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR CCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAACCTTCTGGGCCTGGATaGACAGCTGAGGATGAAAAT +
Preference number: 2 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEPSGPG*TAEDEN
Trigger: ATTTTCATCCTCAGCTGTCCATCCAGGCCCAGAAGG...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
3UTR-3UTR CCA 90 bp AGCCAATCAAGCCTCTGTTTTTGCATGCTGTCAATTTCCTTGGCTTTTAACTCTTCAAGTTGTGTTGCCTaGGCACTGATAAGTGTGATA +
Preference number: 2 (lower is better)
Translates to: SQSSLCFCMLSISLAFNSSSCVA*ALISVI
Trigger: TATCACACTTATCAGTGCCCAGGCAACACAACTTGA...AGAGTTAAAAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGCTTGATTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR CCA 90 bp TTGGAGTCTATACATTTCTTCAGCTTTGAGCTCATTCAGTTCCTTTGTTCTTCTCTCTCCAAGGCCTTTTaGCTACCGATAGGAAATCTG +
Preference number: 2 (lower is better)
Translates to: LESIHFFSFELIQFLCSSLSKAF*LPIGNL
Trigger: CAGATTTCCTATCGGTAGCCAAAAGGCCTTGGAGAG...AGAAGAACAAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTATAGACTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR GCA 90 bp CAAGCCTCTGTTTTTGCATGCTGTCAATTTCCTTGGCTTTTAACTCTTCTAGTTTTTCATCCAGGGAATTaGCATTACAGGGCCTTTCTA +
Preference number: 2 (lower is better)
Translates to: QASVFACCQFPWLLTLLVFHPGN*HYRAFL
Trigger: TAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAA...AACTAGAAGAGTTAAAAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CCA 90 bp CAAGCCTCTGTTTTTGCATGCTGTCAATTTCCTTGGCTTTTAACTCTTCTAGTTGCTGACGAATGTTGTTaGATTCAAAATCAACAGCTG +
Preference number: 2 (lower is better)
Translates to: QASVFACCQFPWLLTLLVADECC*IQNQQL
Trigger: CAGCTGTTGATTTTGAATCCAACAACATTCGTCAGC...AACTAGAAGAGTTAAAAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR CAA 90 bp GTGTTGGTATCAATGCCAGCAAGGGTTCAACAGCAACCTGAATCCTaGTGTGAAATATACGTATCGATTATCTTTCAAAACATTTTCATC +
Preference number: 2 (lower is better)
Translates to: VLVSMPARVQQQPES*CEIYVSIIFQNIFI
Trigger: GATGAAAATGTTTTGAAAGATAATCGATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCTTGCTGGCATTGATACCAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
3UTR-3UTR GCA 90 bp TTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTTGACGCATTTCCAGAACCATTaGCATGACAAAAGAAAATGC +
Preference number: 2 (lower is better)
Translates to: FLHPKSRISICDFIISLTHFQNH*HDKRKC
Trigger: GCATTTTCTTTTGTCATGGCAATGGTTCTGGAAATG...CGTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR GCA 90 bp AGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATCGATTATCTTTATAATCAAGTTGTGTTaGCTGGGCACTGATAAGTGT +
Preference number: 2 (lower is better)
Translates to: RVQQQPESLCEIYVSIIFIIKLC*LGTDKC
Trigger: ACACTTATCAGTGCCCAGGCAACACAACTTGATTAT...AAAGATAATCGATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
3UTR-3UTR GCA 90 bp GTTTTCTTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTCATTGTTTTCTTCCTaGATCCAAAGTCGAGGATCA +
Preference number: 2 (lower is better)
Translates to: VFFLHPKSRISICDFIISSLFSS*IQSRGS
Trigger: TGATCCTCGACTTTGGATGCAGGAAGAAAACAATGA...AGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR GCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAAATAATCAAGTTGTGTTaGCTGGGCACTGATAAGTGT +
Preference number: 2 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEIIKLC*LGTDKC
Trigger: ACACTTATCAGTGCCCAGGCAACACAACTTGATTAT...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
3UTR-3UTR CCA 90 bp GTTTTCTTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTTGAAGCTTGCACTTTaGTCTAGAATAAATGGTCCT +
Preference number: 2 (lower is better)
Translates to: VFFLHPKSRISICDFIISLKLAL*SRINGP
Trigger: AGGACCATTTATTCTAGACCAAAGTGCAAGCTTCAA...AGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR CCA 72 bp GTGAGGATGACCTCCCCGGCACTGCCTTCCTTTCAGTaGGCAGCACCTTCTGGGCCTGGATGGACAGCTGAG +
Preference number: 3 (lower is better)
Translates to: VRMTSPALPSFQ*AAPSGPGWTAE
Trigger: CTCAGCTGTCCATCCAGGCCCAGAAGGTGCTGCCCACTGAAAGGAAGGCAGTGCCGGGGAGGTCATCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
3UTR TCA 72 bp GGTGGGACAAAGAGGGGAGCTCGGCCTTCTTTCTGTTaGGAATCTTCGGCTAGGGAGAGAAGAGGGGCCTCT +
Preference number: 3 (lower is better)
Translates to: GGTKRGARPSFC*ESSARERRGAS
Trigger: AGAGGCCCCTCTTCTCTCCCTAGCCGAAGATTCTCAACAGAAAGAAGGCCGAGCTCCCCTCTTTGTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTTCACGGCTGGATCCTaGCGATCCACTGTCTTCGTG +
Preference number: 3 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLAFTAGS*RSTVFV
Trigger: CACGAAGACAGTGGATCGCAAGGATCCAGCCGTGAA...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR TCA 72 bp GTCCTTTGCTGTGAGGGGCCTCCTCTCACCCTTTGGTaGTGTACTTGGCCATCTCTCCAAGGCCTTTTGGCT +
Preference number: 3 (lower is better)
Translates to: VLCCEGPPLTLW*CTWPSLQGLLA
Trigger: AGCCAAAAGGCCTTGGAGAGATGGCCAAGTACATCACCAAAGGGTGAGAGGAGGCCCCTCACAGCAAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR CCA 72 bp GTGACAAACATCTGTAAGGCCCGAATGGCTCCTCGATaGGCAGCCGCCAGCTTAGACATTGCCCATGACTTC +
Preference number: 3 (lower is better)
Translates to: VTNICKARMAPR*AAASLDIAHDF
Trigger: GAAGTCATGGGCAATGTCTAAGCTGGCGGCTGCCCATCGAGGAGCCATTCGGGCCTTACAGATGTTTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR TCA 72 bp CGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACTaGGTGACAAACATCTGTAAGGCCCGAATGGCTCCT +
Preference number: 3 (lower is better)
Translates to: RAGSGCSPRSVN*VTNICKARMAP
Trigger: AGGAGCCATTCGGGCCTTACAGATGTTTGTCACTCAGTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
3UTR GCA 72 bp GAAGGTACTGCTCAAAACGACTACAGTAGTCACCGATaGTGTGCTGCATACCCGGTGGGACAAAGAGGGGAG +
Preference number: 3 (lower is better)
Translates to: EGTAQNDYSSHR*CAAYPVGQRGE
Trigger: CTCCCCTCTTTGTCCCACCGGGTATGCAGCACAGCATCGGTGACTACTGTAGTCGTTTTGAGCAGTACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR CCA 72 bp GTGACAAACATCTGTAAGGCCCGAATGGCTCCTCGATaGGCAGCCGCCAGCTTAGACATTGCCCATGACTTT +
Preference number: 3 (lower is better)
Translates to: VTNICKARMAPR*AAASLDIAHDF
Trigger: AAAGTCATGGGCAATGTCTAAGCTGGCGGCTGCCCATCGAGGAGCCATTCGGGCCTTACAGATGTTTGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572235.1
3UTR-3UTR CAA 90 bp GAACAAAGTGAAAGCTGGCGAATAAGGCTGCCCAGTTCCTTACACCGAGCAGGAGCCTCCTCTCACCCTTaGGTGATGTACTTGGCCATC +
Preference number: 3 (lower is better)
Translates to: EQSESWRIRLPSSLHRAGASSHP*VMYLAI
Trigger: GATGGCCAAGTACATCACCAAAGGGTGAGAGGAGGC...TCCTGCTCGGTGTAAGGAACTGGGCAGCCTTATTCGCCAGCTTTCACTTTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR TCA 72 bp ACGGTGGCTAAGGTTTCAGACCCCAAGATCTTAGCATaGGTCACAGCCCAGAGCTCACTGGCACAATCTTCC +
Preference number: 3 (lower is better)
Translates to: TVAKVSDPKILA*VTAQSSLAQSS
Trigger: GGAAGATTGTGCCAGTGAGCTCTGGGCTGTGACTCATGCTAAGATCTTGGGGTCTGAAACCTTAGCCACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR TCA 72 bp GCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTaGCACAAATGGCCTCGCCTCAGAGAGCCTTTATGT +
Preference number: 3 (lower is better)
Translates to: AKTKGGAIPSPV*HKWPRLREPLC
Trigger: ACATAAAGGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR TCA 72 bp GTCGACTTGTTTCCTGTGGGAATGTGTCCTTTGCTGTaGGGGGCCTCCTCTCACCCTTTGGTGATGTACTTG +
Preference number: 3 (lower is better)
Translates to: VDLFPVGMCPLL*GASSHPLVMYL
Trigger: CAAGTACATCACCAAAGGGTGAGAGGAGGCCCCTCACAGCAAAGGACACATTCCCACAGGAAACAAGTCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR CCA 72 bp GGGTCTGCATCCAGCTTGACAGAACAAAGTGAAAGCTaGCGAATAAGGCTGCCCAGTTCCTTACACCGAGCA +
Preference number: 3 (lower is better)
Translates to: GSASSLTEQSES*RIRLPSSLHRA
Trigger: TGCTCGGTGTAAGGAACTGGGCAGCCTTATTCGCCAGCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
3UTR-3UTR CAA 90 bp AGTCACCGATGCTGTGCTGCATACCCGGTGGGACAAAGAGGGGAGCTCGGCCTTATCAAGCCTCTGTTTTaGCATGCTGTCAATTTCCTT +
Preference number: 3 (lower is better)
Translates to: SHRCCAAYPVGQRGELGLIKPLF*HAVNFL
Trigger: AAGGAAATTGACAGCATGCAAAAACAGAGGCTTGAT...AAGGCCGAGCTCCCCTCTTTGTCCCACCGGGTATGCAGCACAGCATCGGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp CGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGGTGGCAGAAACACTCGCTTCTGTAGTAGAATaGACTCTCTGGGCCTTGACC +
Preference number: 3 (lower is better)
Translates to: RSRTASSTLSAKWVAETLASVVE*TLWALT
Trigger: GGTCAAGGCCCAGAGAGTCAATTCTACTACAGAAGC...GAGTGTTTCTGCCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp CTGCATAATCTTCGCACATATCCTGAAGTTCAGCAGCCACAGCACCCAGAGCTTAGATCTGGGCTATCCTaGCTGTCCTCAACGGTGGCT +
Preference number: 3 (lower is better)
Translates to: LHNLRTYPEVQQPQHPELRSGLS*LSSTVA
Trigger: AGCCACCGTTGAGGACAGCAAGGATAGCCCAGATCT...AAGCTCTGGGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAGATTATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp GCTGCAACCTCCTGTGCAGGCTGGGCTTTCGCTGTGTTTACTGACGAGCCATCTCAGCAACCTGAATCCTaGTGTGAAATATACGTATCG +
Preference number: 3 (lower is better)
Translates to: AATSCAGWAFAVFTDEPSQQPES*CEIYVS
Trigger: CGATACGTATATTTCACACAAGGATTCAGGTTGCTG...AGATGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR CAA 90 bp CTCTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCATCTGGATGAAACTGTaGTCTGCTGCACTCTGCTTT +
Preference number: 3 (lower is better)
Translates to: LWALTKRGFKRSRTASSTIWMKL*SAALCF
Trigger: AAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGAT...GGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp TGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCTTTATGCTTTCATCCAGGGAATaGCCATTACAGGGCCTTTCT +
Preference number: 3 (lower is better)
Translates to: CHPFSSVTQMASPQRAFMLSSRE*PLQGLS
Trigger: AGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAG...CATAAAGGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp TCTAATACATCAAGCTCACTCTGCAACCTCTGGGTCTCCGGAAGCTCCGTATCGGGGTCTGCATCCAGCTaGACAGAACAAAGTGAAAGC +
Preference number: 3 (lower is better)
Translates to: SNTSSSLCNLWVSGSSVSGSASS*TEQSES
Trigger: GCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCC...CGATACGGAGCTTCCGGAGACCCAGAGGTTGCAGAGTGAGCTTGATGTATTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR CAA 90 bp ACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACTGAGTGACAAACATGGGTCTGCATCCAGCTaGACAGAACAAAGTGAAAGC +
Preference number: 3 (lower is better)
Translates to: TPSRKWMLPSVSKLSDKHGSASS*TEQSES
Trigger: GCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCC...ATGTTTGTCACTCAGTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
3UTR-3UTR CAA 90 bp TGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCTTTATGCTACAGAAGGTCGACTaGTTTCCTGTGGGAATGTGT +
Preference number: 3 (lower is better)
Translates to: CHPFSSVTQMASPQRAFMLQKVD*FPVGMC
Trigger: ACACATTCCCACAGGAAACAAGTCGACCTTCTGTAG...CATAAAGGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR CAA 90 bp TCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTACAGGGCCTTTCTAACGGAGTCCTTGCTGTCTaGCTGGCGCCAGAGTATCTT +
Preference number: 3 (lower is better)
Translates to: SSVPTLSSRELPLQGLSNGVLAV*LAPEYL
Trigger: AAGATACTCTGGCGCCAGCAAGACAGCAAGGACTCC...GTTAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR TCA 72 bp CTTCACCCAGGCACAGGAGAAGGCCTGGTCCTCTCCTaGTTCCTCAAACTTCCTCTGAATCCAGAGAAAGTT +
Preference number: 3 (lower is better)
Translates to: LHPGTGEGLVLS*FLKLPLNPEKV
Trigger: AACTTTCTCTGGATTCAGAGGAAGTTTGAGGAATCAGGAGAGGACCAGGCCTTCTCCTGTGCCTGGGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR GCA 72 bp TCCCTTATTCCCTGGGGGCGTCTCAGGCATTCTTTCTaGATGTTTCCTTCACTGAGCCTCAGGCTACGAATT +
Preference number: 3 (lower is better)
Translates to: SLIPWGRLRHSF*MFPSLSLRLRI
Trigger: AATTCGTAGCCTGAGGCTCAGTGAAGGAAACATGCAGAAAGAATGCCTGAGACGCCCCCAGGGAATAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR CCA 72 bp AATAAGGCTGCCCAGTTCCTTACACCGAGCAGGAAGTaGATGCTCCCCTCGGTCAGTAAACTGAGTGACAAA +
Preference number: 3 (lower is better)
Translates to: NKAAQFLTPSRK*MLPSVSKLSDK
Trigger: TTTGTCACTCAGTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGTAAGGAACTGGGCAGCCTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
3UTR-3UTR CAA 90 bp GAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGGTGGATTGCCATAATCAAGTaGTGTTGCCTGGGCACTGAT +
Preference number: 3 (lower is better)
Translates to: EASNDPELPPLPCLLSGWIAIIK*CCLGTD
Trigger: ATCAGTGCCCAGGCAACACAACTTGATTATGGCAAT...CCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR CAA 90 bp GGCTACGAATTGAGAGAAAGTCTTTCCAGGCAGTGGCCTGATTCTTACGCACATGTAGCCGCACTTGTGTaGGTATCAATGCCAGCAAGG +
Preference number: 3 (lower is better)
Translates to: GYELRESLSRQWPDSYAHVAALV*VSMPAR
Trigger: CCTTGCTGGCATTGATACCAACACAAGTGCGGCTAC...ATGTGCGTAAGAATCAGGCCACTGCCTGGAAAGACTTTCTCTCAATTCGTAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR CAA 90 bp CTTTTCTCTGATCCTTCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTAGGTATCCATGGTGCCTaGCGGTCTTTCACAGGCTGC +
Preference number: 3 (lower is better)
Translates to: LFSDPSSVPTLSSRELPLGIHGA*RSFTGC
Trigger: GCAGCCTGTGAAAGACCGCAAGGCACCATGGATACC...TAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAGGATCAGAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp GAGAATCTTCGGCTAGGGAGAGAAGAGGGGCCTCTCTTTTCTCTGATCCTTCCTCTTTCATCCAGGGAATaGCCATTACAGGGCCTTTCT +
Preference number: 3 (lower is better)
Translates to: ENLRLGREEGPLFSLILPLSSRE*PLQGLS
Trigger: AGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAG...AGGAAGGATCAGAGAAAAGAGAGGCCCCTCTTCTCTCCCTAGCCGAAGATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp CTGCATAATCTTCGCACATATCCTGAAGTTCAGCAGCCACAGCACCCAGAGCTTCTACCTCTTTCAGCTTaGCGGAGTCCTTGCTGTCTT +
Preference number: 3 (lower is better)
Translates to: LHNLRTYPEVQQPQHPELLPLSA*RSPCCL
Trigger: AAGACAGCAAGGACTCCGCAAAGCTGAAAGAGGTAG...AAGCTCTGGGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAGATTATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR TCA 72 bp CATCCAGGGAATTGCCATTACAGGGCCTTTCTAACATaGTGTTCACGGCTGGATCCTTGCGATCCACTGTCT +
Preference number: 3 (lower is better)
Translates to: HPGNCHYRAFLT*CSRLDPCDPLS
Trigger: AGACAGTGGATCGCAAGGATCCAGCCGTGAACATCATGTTAGAAAGGCCCTGTAATGGCAATTCCCTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR TCA 72 bp GCTATCAGCCACGGGTTGAAGGAGCCTACAGCCTCATaGGATATGATCCGAAGGTACTGCTCAAAACGACTA +
Preference number: 3 (lower is better)
Translates to: AISHGLKEPTAS*DMIRRYCSKRL
Trigger: TAGTCGTTTTGAGCAGTACCTTCGGATCATATCTCATGAGGCTGTAGGCTCCTTCAACCCGTGGCTGATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR CCA 72 bp GGTCTTCGCGCCATCCATCTGTTCCCTACTCCCACTTaGGTTCCTTTGTGGTATGAAATAGAGACACTTCTG +
Preference number: 3 (lower is better)
Translates to: GLRAIHLFPTPT*VPLWYEIETLL
Trigger: CAGAAGTGTCTCTATTTCATACCACAAAGGAACCCAAGTGGGAGTAGGGAACAGATGGATGGCGCGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR CCA 72 bp GGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTaGGGGCGTCTCAGGCATTCTTTCTGCATGTTTCCT +
Preference number: 3 (lower is better)
Translates to: GTGQVIKSSLIP*GRLRHSFCMFP
Trigger: AGGAAACATGCAGAAAGAATGCCTGAGACGCCCCCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR CAA 90 bp CTTCGCACATATCCTGAAGTTCAGCAGCCACAGCACCCAGAGCTTCATCTACCAATCTGGATGAAACTGTaGTCTGCTGCACTCTGCTTT +
Preference number: 3 (lower is better)
Translates to: LRTYPEVQQPQHPELHLPIWMKL*SAALCF
Trigger: AAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGAT...TGGTAGATGAAGCTCTGGGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp TCATCCAGGGAATTGCCATTACAGGGCCTTTCTAACATGATGTTCACGGCTGGACAGGTGACTTTCCTCTaGAGGATCTTCTTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: SSRELPLQGLSNMMFTAGQVTFL*RIFLLE
Trigger: CTCCAGCAAGAAGATCCTCAAGAGGAAAGTCACCTG...TCCAGCCGTGAACATCATGTTAGAAAGGCCCTGTAATGGCAATTCCCTGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp TATTTTTCCATCTCTTCCATTCGGCGCATCATGATCTCCAGATCTGGGCTATCCCCTTTGGTGATGTACTaGGCCATCTCTCCAAGGCCT +
Preference number: 3 (lower is better)
Translates to: YFSISSIRRIMISRSGLSPLVMY*AISPRP
Trigger: AGGCCTTGGAGAGATGGCCAAGTACATCACCAAAGG...GGATAGCCCAGATCTGGAGATCATGATGCGCCGAATGGAAGAGATGGAAAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR TCA 72 bp CTGCATGTTTCCTTCACTGAGCCTCAGGCTACGAATTaGGAGAAAGTCTTTCCAGGCAGTGGCCTGATTCTT +
Preference number: 3 (lower is better)
Translates to: LHVSFTEPQATN*EKVFPGSGLIL
Trigger: AAGAATCAGGCCACTGCCTGGAAAGACTTTCTCTCAATTCGTAGCCTGAGGCTCAGTGAAGGAAACATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR TCA 72 bp GGCGTCTCAGGCATTCTTTCTGCATGTTTCCTTCACTaGGCCTCAGGCTACGAATTGAGAGAAAGTCTTTCC +
Preference number: 3 (lower is better)
Translates to: GVSGILSACFLH*ASGYELRESLS
Trigger: GGAAAGACTTTCTCTCAATTCGTAGCCTGAGGCTCAGTGAAGGAAACATGCAGAAAGAATGCCTGAGACGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR TCA 72 bp CCTGGTATTTTTCCATCTCTTCCATTCGGCGCATCATaGTCTCCAGATCTGGGCTATCCTTGCTGTCCTCAA +
Preference number: 3 (lower is better)
Translates to: PGIFPSLPFGAS*SPDLGYPCCPQ
Trigger: TTGAGGACAGCAAGGATAGCCCAGATCTGGAGATCATGATGCGCCGAATGGAAGAGATGGAAAAATACCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR GCA 72 bp CGTATCGGGCTGATACTTATCGGCAAGAAGCTGCTTTaGTACAGAAGGTCGACTTGTTTCCTGTGGGAATGT +
Preference number: 3 (lower is better)
Translates to: RIGLILIGKKLL*YRRSTCFLWEC
Trigger: ACATTCCCACAGGAAACAAGTCGACCTTCTGTAGCAAAGCAGCTTCTTGCCGATAAGTATCAGCCCGATACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR CCA 72 bp CGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTaGGTGGCAGAAACACTCAATTGTTGGAGTCTATAC +
Preference number: 3 (lower is better)
Translates to: RSRTASSTLSAK*VAETLNCWSLY
Trigger: GTATAGACTCCAACAATTGAGTGTTTCTGCCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTATTGCCATAATCAAGTaGTGTTGCCTGGGCACTGAT +
Preference number: 3 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLIAIIK*CCLGTD
Trigger: ATCAGTGCCCAGGCAACACAACTTGATTATGGCAAT...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
3UTR-3UTR CAA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGGCCTCAGGCTACGAATaGAGAGAAAGTCTTTCCAGG +
Preference number: 3 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWASGYE*RESLSR
Trigger: CCTGGAAAGACTTTCTCTCAATTCGTAGCCTGAGGC...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR CAA 90 bp TCTTTCACAGGCTGCCGGTTCATTTTTAATCTGGATGAAACTGTTGTCTGCTGCCAGGTGACTTTCCTCTaGAGGATCTTCTTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: SFTGCRFIFNLDETVVCCQVTFL*RIFLLE
Trigger: CTCCAGCAAGAAGATCCTCAAGAGGAAAGTCACCTG...GCAGCAGACAACAGTTTCATCCAGATTAAAAATGAACCGGCAGCCTGTGAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp CGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGGTGGCAGAAACACTCATGCTGTCAATTTCCTaGGCTTTTAACTCTTCTAGT +
Preference number: 3 (lower is better)
Translates to: RSRTASSTLSAKWVAETLMLSIS*AFNSSS
Trigger: ACTAGAAGAGTTAAAAGCCAAGGAAATTGACAGCAT...GAGTGTTTCTGCCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp CTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCATCAAGCCTCTGTTTTaGCATGCTGTCAATTTCCTT +
Preference number: 3 (lower is better)
Translates to: LDQERLQTIQNCLLYLVCIKPLF*HAVNFL
Trigger: AAGGAAATTGACAGCATGCAAAAACAGAGGCTTGAT...GCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp CTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCGGCAGAAACACTCAATaGTTGGAGTCTATACATTTC +
Preference number: 3 (lower is better)
Translates to: LDQERLQTIQNCLLYLVCGRNTQ*LESIHF
Trigger: GAAATGTATAGACTCCAACAATTGAGTGTTTCTGCC...GCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR TCA 72 bp TCTGTTCCCTACTCCCACTTGGGTTCCTTTGTGGTATaGAATAGAGACACTTCTGACCTCATCGGAGACACA +
Preference number: 3 (lower is better)
Translates to: SVPYSHLGSFVV*NRDTSDLIGDT
Trigger: TGTGTCTCCGATGAGGTCAGAAGTGTCTCTATTTCATACCACAAAGGAACCCAAGTGGGAGTAGGGAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR TCA 72 bp GATGAAACTGTTGTCTGCTGCACTCTGCTTTTACTGTaGGGTTGGCTTTGTCTACCTCTTTCAGCTTTGCGG +
Preference number: 3 (lower is better)
Translates to: DETVVCCTLLLL*GWLCLPLSALR
Trigger: CCGCAAAGCTGAAAGAGGTAGACAAAGCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR TCA 72 bp CCATCCCTTCGTCCCCAGTGTAATAGGAATTTAGCATaGAGGAGTGAAGGTGGAGGTGACTCTGGAAATGTA +
Preference number: 3 (lower is better)
Translates to: PSLRPQCNRNLA*RSEGGGDSGNV
Trigger: TACATTTCCAGAGTCACCTCCACCTTCACTCCTTCATGCTAAATTCCTATTACACTGGGGACGAAGGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572235.1
3UTR-3UTR CAA 90 bp TGGAACGTTGAAGAAATGTGTGTCTATTATTGTGCACTGACAGCCAGGGGGCTCCAGCAACCTGAATCCTaGTGTGAAATATACGTATCG +
Preference number: 3 (lower is better)
Translates to: WNVEEMCVYYCALTARGLQQPES*CEIYVS
Trigger: CGATACGTATATTTCACACAAGGATTCAGGTTGCTG...GAGCCCCCTGGCTGTCAGTGCACAATAATAGACACACATTTCTTCAACGTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR CAA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGATGATCTGTAAGATGTaGGAGGACCAGGCTATGATG +
Preference number: 3 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWMICKM*EDQAMM
Trigger: CATCATAGCCTGGTCCTCCAACATCTTACAGATCAT...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR-3UTR CAA 90 bp GTTTTCTTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTGCTATCAGCCACGGGTaGAAGGAGCCTACAGCCTCA +
Preference number: 3 (lower is better)
Translates to: VFFLHPKSRISICDFIISAISHG*KEPTAS
Trigger: TGAGGCTGTAGGCTCCTTCAACCCGTGGCTGATAGC...AGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR TCA 72 bp AACCTCCTGTGCAGGCTGGGCTTTCGCTGTGTTTACTaGCGAGCCATCTTTCAAATGAATATTTGCTTCTGT +
Preference number: 3 (lower is better)
Translates to: NLLCRLGFRCVY*RAIFQMNICFC
Trigger: ACAGAAGCAAATATTCATTTGAAAGATGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR CCA 72 bp TGCGGTCTTTCACAGGCTGCCGGTTCATTTTTAATCTaGATGAAACTGTTGTCTGCTGCACTCTGCTTTTAC +
Preference number: 3 (lower is better)
Translates to: CGLSQAAGSFLI*MKLLSAALCFY
Trigger: GTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAAAAATGAACCGGCAGCCTGTGAAAGACCGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp CCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTTGACGAACAGACTCGTAGCCGCACTTGTGTaGGTATCAATGCCAGCAAGG +
Preference number: 3 (lower is better)
Translates to: PKSRISICDFIISLTNRLVAALV*VSMPAR
Trigger: CCTTGCTGGCATTGATACCAACACAAGTGCGGCTAC...GAGTCTGTTCGTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR CAA 90 bp TCTGTAGTAGAATTGACTCTCTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCGGCAGAAACACTCAATaGTTGGAGTCTATACATTTC +
Preference number: 3 (lower is better)
Translates to: SVVELTLWALTKRGFKRSGRNTQ*LESIHF
Trigger: GAAATGTATAGACTCCAACAATTGAGTGTTTCTGCC...GGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAGAGAGTCAATTCTACTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR CCA 72 bp TCAGGCTACGAATTGAGAGAAAGTCTTTCCAGGCAGTaGCCTGATTCTTACGCACATTCCGTTTCTTTTTCT +
Preference number: 3 (lower is better)
Translates to: SGYELRESLSRQ*PDSYAHSVSFS
Trigger: AGAAAAAGAAACGGAATGTGCGTAAGAATCAGGCCACTGCCTGGAAAGACTTTCTCTCAATTCGTAGCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR CCA 72 bp GCCACGGCTAACACCTCGTCTTTGAAGCTTGCACTTTaGTCTAGAATAAATGGTCCTTCTTCCAGAACTATA +
Preference number: 3 (lower is better)
Translates to: ATANTSSLKLAL*SRINGPSSRTI
Trigger: TATAGTTCTGGAAGAAGGACCATTTATTCTAGACCAAAGTGCAAGCTTCAAAGACGAGGTGTTAGCCGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR CAA 90 bp TCCAGAACTATATCCGCATCTAATACATCAAGCTCACTCTGCAACCTCTGGGTCATGCTGTCAATTTCCTaGGCTTTTAACTCTTCTAGT +
Preference number: 3 (lower is better)
Translates to: SRTISASNTSSSLCNLWVMLSIS*AFNSSS
Trigger: ACTAGAAGAGTTAAAAGCCAAGGAAATTGACAGCAT...GACCCAGAGGTTGCAGAGTGAGCTTGATGTATTAGATGCGGATATAGTTCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR GCA 72 bp AGTTGTGTTGCCTGGGCACTGATAAGTGTGATACATTaGATCATACATTTCCAGAACCATTGCCATGACAAA +
Preference number: 3 (lower is better)
Translates to: SCVAWALISVIH*IIHFQNHCHDK
Trigger: TTTGTCATGGCAATGGTTCTGGAAATGTATGATGCAATGTATCACACTTATCAGTGCCCAGGCAACACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
3UTR-3UTR CAA 90 bp AGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATCGATTATCTTTATTGCCATAATCAAGTaGTGTTGCCTGGGCACTGAT +
Preference number: 3 (lower is better)
Translates to: RVQQQPESLCEIYVSIIFIAIIK*CCLGTD
Trigger: ATCAGTGCCCAGGCAACACAACTTGATTATGGCAAT...AAAGATAATCGATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
3UTR-3UTR CAA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAACTCTTGAGGATCTTCTaGCTGGAGAGGCTCTTTTGT +
Preference number: 3 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEELLRIF*LERLFC
Trigger: ACAAAAGAGCCTCTCCAGCAAGAAGATCCTCAAGAG...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR GCA 72 bp GTTTTCTTCCTGCATCCAAAGTCGAGGATCAGCATATaGGATTTTATTATATCTTTGACGAACAGACTCCTG +
Preference number: 3 (lower is better)
Translates to: VFFLHPKSRISI*DFIISLTNRLL
Trigger: CAGGAGTCTGTTCGTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp CAGCATATGCGATTTTATTATATCTTTGACGAACAGACTCCTGGTATTTTTCCAACTGTGAGGTTGGCTTaGTCTACCTCTTTCAGCTTT +
Preference number: 3 (lower is better)
Translates to: QHMRFYYIFDEQTPGIFPTVRLA*STSFSF
Trigger: AAAGCTGAAAGAGGTAGACAAAGCCAACCTCACAGT...TGGAAAAATACCAGGAGTCTGTTCGTCAAAGATATAATAAAATCGCATATGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR-3UTR CAA 90 bp CAAGCCTCTGTTTTTGCATGCTGTCAATTTCCTTGGCTTTTAACTCTTCTAGTTTACATTTCTTCAGCTTaGAGCTCATTCAGTTCCTTT +
Preference number: 3 (lower is better)
Translates to: QASVFACCQFPWLLTLLVYISSA*SSFSSF
Trigger: AAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTA...AACTAGAAGAGTTAAAAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR-3UTR CAA 90 bp CCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTTGACGAACAGACTCTACATTTCTTCAGCTTaGAGCTCATTCAGTTCCTTT +
Preference number: 3 (lower is better)
Translates to: PKSRISICDFIISLTNRLYISSA*SSFSSF
Trigger: AAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTA...GAGTCTGTTCGTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR GCA 72 bp ATTGGGTTTATTTTAAAAACTCAGCACAGTACAAACTaGCACACAAATTACTTTATACTAGCAACAACCGGT +
Preference number: 3 (lower is better)
Translates to: IGFILKTQHSTN*HTNYFILATTG
Trigger: ACCGGTTGTTGCTAGTATAAAGTAATTTGTGTGGCAGTTTGTACTGTGCTGAGTTTTTAAAATAAACCCAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCGTGAGGCGCGGCTACTaGGAGGCGGGCAACGGGGGC +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLAVRRGY*EAGNGG
Trigger: GCCCCCGTTGCCCGCCTCCCAGTAGCCGCGCCTCAC...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000572370.5
CDS-3UTR CCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGTGAGGCGCGGCTACTaGGAGGCGGGCAACGGGGGC +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASVRRGY*EAGNGG
Trigger: GCCCCCGTTGCCCGCCTCCCAGTAGCCGCGCCTCAC...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000572370.5
CDS-3UTR TCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCGGTTCTGGCCTAGGGTaGGGCGCGGCTACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLAGSGLG*GAATGR
Trigger: CCTCCCAGTAGCCGCGCCTCACCCTAGGCCAGAACC...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572370.5
CDS-3UTR CCA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCCGAATGGCTCCTCGATaGGCAGCCGCCAGCTTAGAC +
Preference number: 4 (lower is better)
Translates to: GWCHPFSSVTQMASPQRARMAPR*AAASLD
Trigger: GTCTAAGCTGGCGGCTGCCCATCGAGGAGCCATTCG...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGATTCCTGGCCTAGGGTaGGGCGCGGCTACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASIPGLG*GAATGR
Trigger: CCTCCCAGTAGCCGCGCCTCACCCTAGGCCAGGAAT...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCAGCTGCAACCTCCTGTaGAGGCTGGGCTTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: GWCHPFSSVTQMASPQRASCNLL*RLGFRC
Trigger: ACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGCT...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCCTGCCTTCCTTTCAGTaGGCAGCACCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GWCHPFSSVTQMASPQRALPSFQ*AAPSGP
Trigger: AGGCCCAGAAGGTGCTGCCCACTGAAAGGAAGGCAG...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCATCCCTTCTCCAGTGTaGCACAAATGGCCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: GWCHPFSSVTQMASPQRAIPSPV*HKWPRL
Trigger: GAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGAT...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp AGTCACCGATGCTGTGCTGCATACCCGGTGGGACAAAGAGGGGAGCTCGGCCTTTGGGGGTATCCATGGTaGCTTGCGGTCTTTCACAGG +
Preference number: 4 (lower is better)
Translates to: SHRCCAAYPVGQRGELGLWGYPW*LAVFHR
Trigger: CCTGTGAAAGACCGCAAGGCACCATGGATACCCCCA...AAGGCCGAGCTCCCCTCTTTGTCCCACCGGGTATGCAGCACAGCATCGGTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCAACTGCAGCTGGTTCTaGCCTAGGGTGAGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLANCSWF*PRVRRG
Trigger: GCCGCGCCTCACCCTAGGCCAGAACCAGCTGCAGTT...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572370.5
CDS-3UTR TCA 90 bp GGCCCCGTGATGGGACCAGCTAGTAGCCGCACTTGTGTTGGTATCAATGCCAGCAGCTGGTTCTGGGTCTaGAGTACTTTGGGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: GPVMGPASSRTCVGINASSWFWV*STLGSL
Trigger: GAGCGACCCCAAAGTACTTCAGACCCAGAACCAGCT...GCTGGCATTGATACCAACACAAGTGCGGCTACTAGCTGGTCCCATCACGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR TCA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCCCCAAGATCTTAGCATaGGTCACAGCCCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GWCHPFSSVTQMASPQRAPKILA*VTAQSS
Trigger: TGAGCTCTGGGCTGTGACTCATGCTAAGATCTTGGG...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCCCATTCGGCGCATCATaGTCTCCAGATCTGGGCTAT +
Preference number: 4 (lower is better)
Translates to: GWCHPFSSVTQMASPQRAPFGAS*SPDLGY
Trigger: ATAGCCCAGATCTGGAGATCATGATGCGCCGAATGG...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp AGCCAGACTGTGCTCTCCCTGAGTCTACAGCCTAGTAGGGCCAGAGGTCCTGACTGGGAATGTGTCCTTTaGTGTGAGGGGCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SQTVLSLSLQPSRARGPDWECVL*CEGPPL
Trigger: GAGAGGAGGCCCCTCACAGCAAAGGACACATTCCCA...GTCAGGACCTCTGGCCCTACTAGGCTGTAGACTCAGGGAGAGCACAGTCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCTGTAAGGCCCGAATaGCTCCTCGATGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLASVRPE*LLDGQP
Trigger: CGGCTGCCCATCGAGGAGCCATTCGGGCCTTACAGA...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp CTTTCTCTGGGGAGACACAGAGGTCTTCGCGCCATCCATCTGTTCCCTACTCCCACACCGAGCAGGAAGTaGATGCTCCCCTCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: LSLGRHRGLRAIHLFPTPTPSRK*MLPSVS
Trigger: ACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGT...GGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGTGTCTCCCCAGAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCGTTTGGGGGTATCCATaGTGCCTTGCGGTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: GWCHPFSSVTQMASPQRAVWGYP*CLAVFH
Trigger: GTGAAAGACCGCAAGGCACCATGGATACCCCCAAAC...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGTGCTGCATACCCGGTaGGACAAAGAGGGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLVLHTR*DKEGSS
Trigger: CGAGCTCCCCTCTTTGTCCCACCGGGTATGCAGCAC...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp GGCCCCGTGATGGGACCAGCTAGTAGCCGCACTTGTGTTGGTATCAATGCCAGCAGCTCCGTATCGGGCTaGTACTTATCGGCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GPVMGPASSRTCVGINASSSVSG*YLSARS
Trigger: GCTTCTTGCCGATAAGTATCAGCCCGATACGGAGCT...GCTGGCATTGATACCAACACAAGTGCGGCTACTAGCTGGTCCCATCACGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR TCA 90 bp CTTTCTCTGGGGAGACACAGAGGTCTTCGCGCCATCCATCTGTTCCCTACTCCCCTATCAGCCACGGGTTaGAGGAGCCTACAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: LSLGRHRGLRAIHLFPTPLSATG*RSLQPH
Trigger: ATGAGGCTGTAGGCTCCTTCAACCCGTGGCTGATAG...GGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGTGTCTCCCCAGAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp GCTGCAACCTCCTGTGCAGGCTGGGCTTTCGCTGTGTTTACTGACGAGCCATCTCTATCAGCCACGGGTTaGAGGAGCCTACAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: AATSCAGWAFAVFTDEPSLSATG*RSLQPH
Trigger: ATGAGGCTGTAGGCTCCTTCAACCCGTGGCTGATAG...AGATGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCTCTTCGCACATATCCTaGAGTTCAGCAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: GWCHPFSSVTQMASPQRASSHIS*SSAATA
Trigger: TGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAGA...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCAGAGCGAGCAGCTTaGTCCTGTCTCCTGATACGG +
Preference number: 4 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLAERAA*SCLLIR
Trigger: CCGTATCAGGAGACAGGAGCAAGCTGCTCGCTCTGC...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000572370.5
CDS-3UTR GCA 90 bp AGTCACCGATGCTGTGCTGCATACCCGGTGGGACAAAGAGGGGAGCTCGGCCTTGAGTCCTTGCTGTCTTaGTGGCGCCAGAGTATCTTT +
Preference number: 4 (lower is better)
Translates to: SHRCCAAYPVGQRGELGLESLLS*WRQSIF
Trigger: AAAGATACTCTGGCGCCAGCAAGACAGCAAGGACTC...AAGGCCGAGCTCCCCTCTTTGTCCCACCGGGTATGCAGCACAGCATCGGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR GCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCCCAAGCGAGCCTGGCTaGTTCATGCTCAACAGCACC +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLAPSEPG*FMLNST
Trigger: GGTGCTGTTGAGCATGAAGCAGCCAGGCTCGCTTGG...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp GGCCCCGTGATGGGACCAGCTAGTAGCCGCACTTGTGTTGGTATCAATGCCAGCGTTTGGGGGTATCCATaGTGCCTTGCGGTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: GPVMGPASSRTCVGINASVWGYP*CLAVFH
Trigger: GTGAAAGACCGCAAGGCACCATGGATACCCCCAAAC...GCTGGCATTGATACCAACACAAGTGCGGCTACTAGCTGGTCCCATCACGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CCA 90 bp GGCCCCGTGATGGGACCAGCTAGTAGCCGCACTTGTGTTGGTATCAATGCCAGCACATTTAGGAGACGCTaGTGGGGATGTGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: GPVMGPASSRTCVGINASTFRRR*WGCGVW
Trigger: CCAAACCCCACATCCCCACCAGCGTCTCCTAAATGT...GCTGGCATTGATACCAACACAAGTGCGGCTACTAGCTGGTCCCATCACGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CCA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCCATGATGTTCACGGCTaGATCCTTGCGATCCACTGT +
Preference number: 4 (lower is better)
Translates to: GWCHPFSSVTQMASPQRAHDVHG*ILAIHC
Trigger: ACAGTGGATCGCAAGGATCCAGCCGTGAACATCATG...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp TGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCTTTATGGTGCTGCATACCCGGTaGGACAAAGAGGGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: CHPFSSVTQMASPQRAFMVLHTR*DKEGSS
Trigger: CGAGCTCCCCTCTTTGTCCCACCGGGTATGCAGCAC...CATAAAGGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGAGACTGTGCTCTCCCTaGGTCTACAGCCTAGTAGGG +
Preference number: 4 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASRLCSP*VYSLVG
Trigger: CCCTACTAGGCTGTAGACTCAGGGAGAGCACAGTCT...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR GCA 90 bp GGCCCCGTGATGGGACCAGCTAGTAGCCGCACTTGTGTTGGTATCAATGCCAGCGAGTCCTTGCTGTCTTaGTGGCGCCAGAGTATCTTT +
Preference number: 4 (lower is better)
Translates to: GPVMGPASSRTCVGINASESLLS*WRQSIF
Trigger: AAAGATACTCTGGCGCCAGCAAGACAGCAAGGACTC...GCTGGCATTGATACCAACACAAGTGCGGCTACTAGCTGGTCCCATCACGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR GCA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGTATCCATGGTGCCTTaGGGTCTTTCACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLVSMVP*GLSQAA
Trigger: GGCAGCCTGTGAAAGACCGCAAGGCACCATGGATAC...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGAGCCTGGCTGCTTCATaGTCAACAGCACCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASSLAAS*STAPVR
Trigger: CCTGACAGGTGCTGTTGAGCATGAAGCAGCCAGGCT...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp CGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGGTGGCAGAAACACTCCCAAGCGAGCCTGGCTaGTTCATGCTCAACAGCACC +
Preference number: 4 (lower is better)
Translates to: RSRTASSTLSAKWVAETLPSEPG*FMLNST
Trigger: GGTGCTGTTGAGCATGAAGCAGCCAGGCTCGCTTGG...GAGTGTTTCTGCCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCTCACCGATGCTGTGCTaGATACCCGGTGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLSPMLC*IPGGTK
Trigger: CTTTGTCCCACCGGGTATGCAGCACAGCATCGGTGA...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCACCGATGCTGTGCTaGATACCCGGTGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLASPMLC*IPGGTK
Trigger: CTTTGTCCCACCGGGTATGCAGCACAGCATCGGTGA...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp CTTTCTCTGGGGAGACACAGAGGTCTTCGCGCCATCCATCTGTTCCCTACTCCCGGGTCTGAAGTACTTTaGGGTCGCTCCTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: LSLGRHRGLRAIHLFPTPGSEVL*GRSSHQ
Trigger: TTGATGGGAGGAGCGACCCCAAAGTACTTCAGACCC...GGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGTGTCTCCCCAGAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp CTTCGCACATATCCTGAAGTTCAGCAGCCACAGCACCCAGAGCTTCATCTACCACGAATGGCTCCTCGATaGGCAGCCGCCAGCTTAGAC +
Preference number: 4 (lower is better)
Translates to: LRTYPEVQQPQHPELHLPRMAPR*AAASLD
Trigger: GTCTAAGCTGGCGGCTGCCCATCGAGGAGCCATTCG...TGGTAGATGAAGCTCTGGGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp CTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTTTTAGGAGACGCTGGTaGGGATGTGGGGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LGLDQERLQTIQNCLLYLFRRRW*GCGVWG
Trigger: CCCCCAAACCCCACATCCCCACCAGCGTCTCCTAAA...AAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp GCTGCAACCTCCTGTGCAGGCTGGGCTTTCGCTGTGTTTACTGACGAGCCATCTACCTCCTGTGCAGGCTaGGCTTTCGCTGTGTTTACT +
Preference number: 4 (lower is better)
Translates to: AATSCAGWAFAVFTDEPSTSCAG*AFAVFT
Trigger: AGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGT...AGATGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGTGCTGCATACCCGGTaGGACAAAGAGGGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNVLHTR*DKEGSS
Trigger: CGAGCTCCCCTCTTTGTCCCACCGGGTATGCAGCAC...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp CTTTCTCTGGGGAGACACAGAGGTCTTCGCGCCATCCATCTGTTCCCTACTCCCCAGGGGGCTCCTGTTTaGAATAAACTGCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LSLGRHRGLRAIHLFPTPQGAPV*NKLQQR
Trigger: CCTCTGCTGCAGTTTATTCCAAACAGGAGCCCCCTG...GGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGTGTCTCCCCAGAGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp ACACTTCTGACCTCATCGGAGACACAGCGAGGTCTGTACCTTCACCCAGGCACAGTCCTAGGTGCTAGATaGACACAGGTTGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: TLLTSSETQRGLYLHPGTVLGAR*TQVEAG
Trigger: GCCAGCTTCAACCTGTGTTCATCTAGCACCTAGGAC...TGTGCCTGGGTGAAGGTACAGACCTCGCTGTGTCTCCGATGAGGTCAGAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp AGCCAGACTGTGCTCTCCCTGAGTCTACAGCCTAGTAGGGCCAGAGGTCCTGACGGATATGACGGAAAATaGAACAGAACTGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SQTVLSLSLQPSRARGPDGYDGK*NRTAQV
Trigger: GACCTGGGCAGTTCTGTTTCATTTTCCGTCATATCC...GTCAGGACCTCTGGCCCTACTAGGCTGTAGACTCAGGGAGAGCACAGTCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR TCA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCCCTCGGTCAGTAAACTaGGTGACAAACATCTGTAAG +
Preference number: 4 (lower is better)
Translates to: GWCHPFSSVTQMASPQRAPRSVN*VTNICK
Trigger: CTTACAGATGTTTGTCACTCAGTTTACTGACCGAGG...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCCCTCTCACCCTTTGGTaGTGTACTTGGCCATCTCTC +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLAPLTLW*CTWPSL
Trigger: GAGAGATGGCCAAGTACATCACCAAAGGGTGAGAGG...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGAGCTCCGTATCGGGCTaGTACTTATCGGCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASSSVSG*YLSARS
Trigger: GCTTCTTGCCGATAAGTATCAGCCCGATACGGAGCT...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCACTCTGCTTTTACTGTaGGGTTGGCTTTGTCTACCT +
Preference number: 4 (lower is better)
Translates to: GWCHPFSSVTQMASPQRATLLLL*GWLCLP
Trigger: AGGTAGACAAAGCCAACCTCACAGTAAAAGCAGAGT...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp GTTTGGGGGTATCCATGGTGCCTTGCGGTCTTTCACAGGCTGCCGGTTCATTTTCTATCAGCCACGGGTTaGAGGAGCCTACAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: VWGYPWCLAVFHRLPVHFLSATG*RSLQPH
Trigger: ATGAGGCTGTAGGCTCCTTCAACCCGTGGCTGATAG...AAAATGAACCGGCAGCCTGTGAAAGACCGCAAGGCACCATGGATACCCCCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp CTTTCTCTGGGGAGACACAGAGGTCTTCGCGCCATCCATCTGTTCCCTACTCCCTCTTCGCACATATCCTaGAGTTCAGCAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LSLGRHRGLRAIHLFPTPSSHIS*SSAATA
Trigger: TGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAGA...GGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGTGTCTCCCCAGAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGTCTATTATTGTGCACTaGCAGCCAGGGGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASSIIVH*QPGGSC
Trigger: ACAGGAGCCCCCTGGCTGTCAGTGCACAATAATAGA...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp AGCCAGACTGTGCTCTCCCTGAGTCTACAGCCTAGTAGGGCCAGAGGTCCTGACAGGAACAGAAGGGTCTaGATCCAGCTTGACAGAACA +
Preference number: 4 (lower is better)
Translates to: SQTVLSLSLQPSRARGPDRNRRV*IQLDRT
Trigger: TGTTCTGTCAAGCTGGATGCAGACCCTTCTGTTCCT...GTCAGGACCTCTGGCCCTACTAGGCTGTAGACTCAGGGAGAGCACAGTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR GCA 90 bp TGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCTTTATGTGGGAATGTGTCCTTTaGTGTGAGGGGCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: CHPFSSVTQMASPQRAFMWECVL*CEGPPL
Trigger: GAGAGGAGGCCCCTCACAGCAAAGGACACATTCCCA...CATAAAGGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCACATCAAGCTCACTCTaGAACCTCTGGGTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLATSSSL*NLWVSG
Trigger: TCCGGAGACCCAGAGGTTGCAGAGTGAGCTTGATGT...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGACATCAAGCTCACTCTaGAACCTCTGGGTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASTSSSL*NLWVSG
Trigger: TCCGGAGACCCAGAGGTTGCAGAGTGAGCTTGATGT...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp ACAGAGGTCTTCGCGCCATCCATCTGTTCCCTACTCCCACTTGGGTTCCTTTGTTGGGGGTATCCATGGTaGCTTGCGGTCTTTCACAGG +
Preference number: 4 (lower is better)
Translates to: TEVFAPSICSLLPLGFLCWGYPW*LAVFHR
Trigger: CCTGTGAAAGACCGCAAGGCACCATGGATACCCCCA...ACAAAGGAACCCAAGTGGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCATGGGGGTATCCATGGTaGCTTGCGGTCTTTCACAGG +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASWGYPW*LAVFHR
Trigger: CCTGTGAAAGACCGCAAGGCACCATGGATACCCCCA...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp CTTCGCACATATCCTGAAGTTCAGCAGCCACAGCACCCAGAGCTTCATCTACCACCAAGCGAGCCTGGCTaGTTCATGCTCAACAGCACC +
Preference number: 4 (lower is better)
Translates to: LRTYPEVQQPQHPELHLPPSEPG*FMLNST
Trigger: GGTGCTGTTGAGCATGAAGCAGCCAGGCTCGCTTGG...TGGTAGATGAAGCTCTGGGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCTACAGTAGTCACCGATaGTGTGCTGCATACCCGGTG +
Preference number: 4 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLYSSHR*CAAYPV
Trigger: CACCGGGTATGCAGCACAGCATCGGTGACTACTGTA...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCACATTCCTATTAAACTaGAGCTGGTTCTGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: GWCHPFSSVTQMASPQRATFLLN*SWFWPR
Trigger: CCTAGGCCAGAACCAGCTGCAGTTTAATAGGAATGT...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572370.5
CDS-3UTR CCA 90 bp GCTCCTCGATGGGCAGCCGCCAGCTTAGACATTGCCCATGACTTTCCATTGATCCGGATCATGGGTGGGTaGCGAATTTGGCACAGTAAG +
Preference number: 4 (lower is better)
Translates to: APRWAAASLDIAHDFPLIRIMGG*RIWHSK
Trigger: CTTACTGTGCCAAATTCGCCACCCACCCATGATCCG...GATCAATGGAAAGTCATGGGCAATGTCTAAGCTGGCGGCTGCCCATCGAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572235.1
CDS-3UTR CCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGTCCCGGATCATGGGTaGGTGGCGAATTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNVPDHG*VANLAQ
Trigger: CTGTGCCAAATTCGCCACCCACCCATGATCCGGGAC...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp ACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACTGAGTGACAAACATACACCGAGCAGGAAGTaGATGCTCCCCTCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: TPSRKWMLPSVSKLSDKHTPSRK*MLPSVS
Trigger: ACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGT...ATGTTTGTCACTCAGTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
CDS-3UTR CCA 90 bp GGCCCCGTGATGGGACCAGCTAGTAGCCGCACTTGTGTTGGTATCAATGCCAGCCTCTCCAAGGCCTTTTaGCTACCGATAGGAAATCTG +
Preference number: 4 (lower is better)
Translates to: GPVMGPASSRTCVGINASLSKAF*LPIGNL
Trigger: CAGATTTCCTATCGGTAGCCAAAAGGCCTTGGAGAG...GCTGGCATTGATACCAACACAAGTGCGGCTACTAGCTGGTCCCATCACGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CCA 90 bp AGCCAGACTGTGCTCTCCCTGAGTCTACAGCCTAGTAGGGCCAGAGGTCCTGACTCCTTGCTGTCTTGCTaGCGCCAGAGTATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SQTVLSLSLQPSRARGPDSLLSC*RQSIFL
Trigger: AAGAAAGATACTCTGGCGCCAGCAAGACAGCAAGGA...GTCAGGACCTCTGGCCCTACTAGGCTGTAGACTCAGGGAGAGCACAGTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CCA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGACATTTAGGAGACGCTaGTGGGGATGTGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASTFRRR*WGCGVW
Trigger: CCAAACCCCACATCCCCACCAGCGTCTCCTAAATGT...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATCTGCCTTCCTTTCAGTaGGCAGCACCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNLPSFQ*AAPSGP
Trigger: AGGCCCAGAAGGTGCTGCCCACTGAAAGGAAGGCAG...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
3UTR CAA 72 bp ATTCGGCGCATCATGATCTCCAGATCTGGGCTATCCTaGCTGTCCTCAACGGTGGCTAAGGTTTCAGACCCC +
Preference number: 4 (lower is better)
Translates to: IRRIMISRSGLS*LSSTVAKVSDP
Trigger: GGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCAAGGATAGCCCAGATCTGGAGATCATGATGCGCCGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCACCATTCGGCGCATCATaGTCTCCAGATCTGGGCTAT +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASPFGAS*SPDLGY
Trigger: ATAGCCCAGATCTGGAGATCATGATGCGCCGAATGG...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp ACACTTCTGACCTCATCGGAGACACAGCGAGGTCTGTACCTTCACCCAGGCACAAGGGCCTTTCTAACATaGTGTTCACGGCTGGATCCT +
Preference number: 4 (lower is better)
Translates to: TLLTSSETQRGLYLHPGTRAFLT*CSRLDP
Trigger: AGGATCCAGCCGTGAACATCATGTTAGAAAGGCCCT...TGTGCCTGGGTGAAGGTACAGACCTCGCTGTGTCTCCGATGAGGTCAGAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCAGGGCCTTTCTAACATaGTGTTCACGGCTGGATCCT +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLARAFLT*CSRLDP
Trigger: AGGATCCAGCCGTGAACATCATGTTAGAAAGGCCCT...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp CTTCGCACATATCCTGAAGTTCAGCAGCCACAGCACCCAGAGCTTCATCTACCAATCCCTTCTCCAGTGTaGCACAAATGGCCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: LRTYPEVQQPQHPELHLPIPSPV*HKWPRL
Trigger: GAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGAT...TGGTAGATGAAGCTCTGGGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp ACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACTGAGTGACAAACATCGAGCAGGAAGTGGATaGTCCCCTCGGTCAGTAAAC +
Preference number: 4 (lower is better)
Translates to: TPSRKWMLPSVSKLSDKHRAGSG*SPRSVN
Trigger: GTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCG...ATGTTTGTCACTCAGTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
CDS-3UTR GCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATTGGGAATGTGTCCTTTaGTGTGAGGGGCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNWECVL*CEGPPL
Trigger: GAGAGGAGGCCCCTCACAGCAAAGGACACATTCCCA...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp ACAGCTGCAACCTCCTGTGCAGGCTGGGCTTTCGCTGTGTTTACTGACGAGCCATTGTCTGCTGCACTCTaGTTTTACTGTGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: TAATSCAGWAFAVFTDEPLSAAL*FYCEVG
Trigger: GCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAA...TGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGTATCCATGGTGCCTTaGGGTCTTTCACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNVSMVP*GLSQAA
Trigger: GGCAGCCTGTGAAAGACCGCAAGGCACCATGGATAC...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATTGGGGGTATCCATGGTaGCTTGCGGTCTTTCACAGG +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNWGYPW*LAVFHR
Trigger: CCTGTGAAAGACCGCAAGGCACCATGGATACCCCCA...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp ACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACTGAGTGACAAACATAGCCTGGCTGCTTCATaGTCAACAGCACCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: TPSRKWMLPSVSKLSDKHSLAAS*STAPVR
Trigger: CCTGACAGGTGCTGTTGAGCATGAAGCAGCCAGGCT...ATGTTTGTCACTCAGTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR GCA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCGCCTCTGTTTTTGCATaGTGTCAATTTCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: GWCHPFSSVTQMASPQRAASVFA*CQFPWL
Trigger: AAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGC...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCCAAACGATCCAGAACTaGCTCCTCTACCTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLAQTIQN*LLYLVC
Trigger: GCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTG...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp CTTTCTCTGGGGAGACACAGAGGTCTTCGCGCCATCCATCTGTTCCCTACTCCCTTCAAAATCAACAGCTaGAACCTCCTGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSLGRHRGLRAIHLFPTPFKINS*NLLCRL
Trigger: CAGCCTGCACAGGAGGTTGCAGCTGTTGATTTTGAA...GGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGTGTCTCCCCAGAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp GCAGCCACAGCACCCAGAGCTTCATCTACCAGCTCTTCTGAAAAGCTTTCAGCTTCACCGATGCTGTGCTaGATACCCGGTGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: AATAPRASSTSSSEKLSASPMLC*IPGGTK
Trigger: CTTTGTCCCACCGGGTATGCAGCACAGCATCGGTGA...AGCTGAAAGCTTTTCAGAAGAGCTGGTAGATGAAGCTCTGGGTGCTGTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCATACAGTAGTCACCGATaGTGTGCTGCATACCCGGTG +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASYSSHR*CAAYPV
Trigger: CACCGGGTATGCAGCACAGCATCGGTGACTACTGTA...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp GAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGGTGGTACAGTAGTCACCGATaGTGTGCTGCATACCCGGTG +
Preference number: 4 (lower is better)
Translates to: EASNDPELPPLPCLLSGWYSSHR*CAAYPV
Trigger: CACCGGGTATGCAGCACAGCATCGGTGACTACTGTA...CCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCGGTGAACACAGCTTCTaGATAATCTTCGCACATATC +
Preference number: 4 (lower is better)
Translates to: GWCHPFSSVTQMASPQRAGEHSF*IIFAHI
Trigger: GATATGTGCGAAGATTATGCAGAAGCTGTGTTCACC...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCATACCTCTTTCAGCTTTaGGGAGTCCCGGCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASYLFQL*GVPARS
Trigger: GCTTCTTGCCGGGACTCCGCAAAGCTGAAAGAGGTA...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542826.6
CDS-3UTR CCA 90 bp GAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGGTGGCGGATCATGGGTGGGTaGCGAATTTGGCACAGTAAG +
Preference number: 4 (lower is better)
Translates to: EASNDPELPPLPCLLSGWRIMGG*RIWHSK
Trigger: CTTACTGTGCCAAATTCGCCACCCACCCATGATCCG...CCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp CTATCCTTGCTGTCCTCAACGGTGGCTAAGGTTTCAGACCCCAAGATCTTAGCAGTCCCGGATCATGGGTaGGTGGCGAATTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: LSLLSSTVAKVSDPKILAVPDHG*VANLAQ
Trigger: CTGTGCCAAATTCGCCACCCACCCATGATCCGGGAC...TGCTAAGATCTTGGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCAAGGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp CTCTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCCTGCTCAGTTCTTTCTaGAGTCGCTGGACTTCTAGC +
Preference number: 4 (lower is better)
Translates to: LWALTKRGFKRSRTASSTLLSSF*SRWTSS
Trigger: GCTAGAAGTCCAGCGACTCCAGAAAGAACTGAGCAG...GGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp GGAACAGAAGGGTCTGCATCCAGCTTGACAGAACAAAGTGAAAGCTGGCGAATATCTGTAAGGCCCGAATaGCTCCTCGATGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GTEGSASSLTEQSESWRISVRPE*LLDGQP
Trigger: CGGCTGCCCATCGAGGAGCCATTCGGGCCTTACAGA...TATTCGCCAGCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCCTTCTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
CDS-3UTR CCA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTACACCGAGCAGGAAGTaGATGCTCCCCTCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLTPSRK*MLPSVS
Trigger: ACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGT...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp TCTAATACATCAAGCTCACTCTGCAACCTCTGGGTCTCCGGAAGCTCCGTATCGTCACTCTGCAACCTCTaGGTCTCCGGAAGCTCCGTA +
Preference number: 4 (lower is better)
Translates to: SNTSSSLCNLWVSGSSVSSLCNL*VSGSSV
Trigger: TACGGAGCTTCCGGAGACCCAGAGGTTGCAGAGTGA...CGATACGGAGCTTCCGGAGACCCAGAGGTTGCAGAGTGAGCTTGATGTATTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGTAGAATTGACTCTCTaGGCCTTGACCAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLVELTL*ALTKRG
Trigger: GCCTCTCTTGGTCAAGGCCCAGAGAGTCAATTCTAC...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCATGCTGTCCTCAACGGTaGCTAAGGTTTCAGACCCCA +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASCCPQR*LRFQTP
Trigger: TGGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCA...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCCATGATCTCCAGATCTaGGCTATCCTTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLHDLQI*AILAVL
Trigger: GAGGACAGCAAGGATAGCCCAGATCTGGAGATCATG...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCCATGATGTTCACGGCTaGATCCTTGCGATCCACTGT +
Preference number: 4 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLHDVHG*ILAIHC
Trigger: ACAGTGGATCGCAAGGATCCAGCCGTGAACATCATG...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCCCTTCTGGGCCTGGATaGACAGCTGAGGATGAAAAT +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLAPSGPG*TAEDEN
Trigger: ATTTTCATCCTCAGCTGTCCATCCAGGCCCAGAAGG...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
3UTR CAA 72 bp AGCACCTGTCAGGTGACTTTCCTCTTGAGGATCTTCTaGCTGGAGAGGCTCTTTTGTGGCATCTCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: STCQVTFLLRIF*LERLFCGISGA
Trigger: AGCCCCAGAGATGCCACAAAAGAGCCTCTCCAGCAAGAAGATCCTCAAGAGGAAAGTCACCTGACAGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp TGCTACAGAAGGTCGACTTGTTTCCTGTGGGAATGTGTCCTTTGCTGTGAGGGGGTCCTAGGTGCTAGATaGACACAGGTTGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CYRRSTCFLWECVLCCEGVLGAR*TQVEAG
Trigger: GCCAGCTTCAACCTGTGTTCATCTAGCACCTAGGAC...CCCCTCACAGCAAAGGACACATTCCCACAGGAAACAAGTCGACCTTCTGTAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR TCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCGGATATGACGGAAAATaGAACAGAACTGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLAGYDGK*NRTAQV
Trigger: GACCTGGGCAGTTCTGTTTCATTTTCCGTCATATCC...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp GGGCTATCCTTGCTGTCCTCAACGGTGGCTAAGGTTTCAGACCCCAAGATCTTACCCAAGATCTTAGCATaGGTCACAGCCCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GLSLLSSTVAKVSDPKILPKILA*VTAQSS
Trigger: TGAGCTCTGGGCTGTGACTCATGCTAAGATCTTGGG...TAAGATCTTGGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCAAGGATAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp GAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGGTGGAGGGCCTTTCTAACATaGTGTTCACGGCTGGATCCT +
Preference number: 4 (lower is better)
Translates to: EASNDPELPPLPCLLSGWRAFLT*CSRLDP
Trigger: AGGATCCAGCCGTGAACATCATGTTAGAAAGGCCCT...CCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp ATTCGGCGCATCATGATCTCCAGATCTGGGCTATCCTTGCTGTCCTCAACGGTGGAGCCTACAGCCTCATaGGATATGATCCGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: IRRIMISRSGLSLLSSTVEPTAS*DMIRRY
Trigger: GTACCTTCGGATCATATCTCATGAGGCTGTAGGCTC...CACCGTTGAGGACAGCAAGGATAGCCCAGATCTGGAGATCATGATGCGCCGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp GGCCCCGTGATGGGACCAGCTAGTAGCCGCACTTGTGTTGGTATCAATGCCAGCATCTACCAGCTCTTCTaGAAAGCTTTCAGCTATCAG +
Preference number: 4 (lower is better)
Translates to: GPVMGPASSRTCVGINASIYQLF*KAFSYQ
Trigger: CTGATAGCTGAAAGCTTTTCAGAAGAGCTGGTAGAT...GCTGGCATTGATACCAACACAAGTGCGGCTACTAGCTGGTCCCATCACGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR TCA 90 bp CGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGGTGGCAGAAACACTCTCTTCGCACATATCCTaGAGTTCAGCAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: RSRTASSTLSAKWVAETLSSHIS*SSAATA
Trigger: TGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAGA...GAGTGTTTCTGCCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTATCCCTTCTCCAGTGTaGCACAAATGGCCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLIPSPV*HKWPRL
Trigger: GAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGAT...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp AAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGAGACTGTGCTCTCCCTaGGTCTACAGCCTAGTAGGG +
Preference number: 4 (lower is better)
Translates to: KRGFKRSRTASSTLSAKWRLCSP*VYSLVG
Trigger: CCCTACTAGGCTGTAGACTCAGGGAGAGCACAGTCT...CCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR GCA 90 bp GGCTACGAATTGAGAGAAAGTCTTTCCAGGCAGTGGCCTGATTCTTACGCACATGCAGAGCGAGCAGCTTaGTCCTGTCTCCTGATACGG +
Preference number: 4 (lower is better)
Translates to: GYELRESLSRQWPDSYAHAERAA*SCLLIR
Trigger: CCGTATCAGGAGACAGGAGCAAGCTGCTCGCTCTGC...ATGTGCGTAAGAATCAGGCCACTGCCTGGAAAGACTTTCTCTCAATTCGTAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCGAGCAGGAAGTGGATaGTCCCCTCGGTCAGTAAAC +
Preference number: 4 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLRAGSG*SPRSVN
Trigger: GTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCG...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp CTCTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCGGCAAGAAGCTGCTTTaGTACAGAAGGTCGACTTGT +
Preference number: 4 (lower is better)
Translates to: LWALTKRGFKRSRTASSTGKKLL*YRRSTC
Trigger: ACAAGTCGACCTTCTGTAGCAAAGCAGCTTCTTGCC...GGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGTCCTTGCTGTCTTaGTGGCGCCAGAGTATCTTT +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASESLLS*WRQSIF
Trigger: AAAGATACTCTGGCGCCAGCAAGACAGCAAGGACTC...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp TCTGCAACCTCTGGGTCTCCGGAAGCTCCGTATCGGGCTGATACTTATCGGCAATACCTCTTTCAGCTTTaGGGAGTCCTTGCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SATSGSPEAPYRADTYRQYLFQL*GVLAVL
Trigger: CAAGACAGCAAGGACTCCGCAAAGCTGAAAGAGGTA...TTGCCGATAAGTATCAGCCCGATACGGAGCTTCCGGAGACCCAGAGGTTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR GCA 90 bp AGTCACCGATGCTGTGCTGCATACCCGGTGGGACAAAGAGGGGAGCTCGGCCTTTCAAGCCTCTGTTTTTaGATGCTGTCAATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SHRCCAAYPVGQRGELGLSSLCF*MLSISL
Trigger: CAAGGAAATTGACAGCATGCAAAAACAGAGGCTTGA...AAGGCCGAGCTCCCCTCTTTGTCCCACCGGGTATGCAGCACAGCATCGGTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCTCAAGCCTCTGTTTTTaGATGCTGTCAATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: GWCHPFSSVTQMASPQRASSLCF*MLSISL
Trigger: CAAGGAAATTGACAGCATGCAAAAACAGAGGCTTGA...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp TCATCCAGGGAATTGCCATTACAGGGCCTTTCTAACATGATGTTCACGGCTGGAAGCTGCAACCTCCTGTaGAGGCTGGGCTTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: SSRELPLQGLSNMMFTAGSCNLL*RLGFRC
Trigger: ACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGCT...TCCAGCCGTGAACATCATGTTAGAAAGGCCCTGTAATGGCAATTCCCTGGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGTTCAAAATCAACAGCTaGAACCTCCTGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASFKINS*NLLCRL
Trigger: CAGCCTGCACAGGAGGTTGCAGCTGTTGATTTTGAA...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGGTTTCACATCTCTTCTaGCTAGGTGGACAGCATAGC +
Preference number: 4 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASVSHLF*LGGQHS
Trigger: GCTATGCTGTCCACCTAGCCAGAAGAGATGTGAAAC...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATCGGATCATGGGTGGGTaGCGAATTTGGCACAGTAAG +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNRIMGG*RIWHSK
Trigger: CTTACTGTGCCAAATTCGCCACCCACCCATGATCCG...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp GGAACAGAAGGGTCTGCATCCAGCTTGACAGAACAAAGTGAAAGCTGGCGAATAGTCCCGGATCATGGGTaGGTGGCGAATTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: GTEGSASSLTEQSESWRIVPDHG*VANLAQ
Trigger: CTGTGCCAAATTCGCCACCCACCCATGATCCGGGAC...TATTCGCCAGCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCCTTCTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
CDS-3UTR CCA 90 bp TTCCAGTTCAAGATAGTGAATAGGCAGTGTTCACCTTCCATCCCTTCGTCCCCAACACCGAGCAGGAAGTaGATGCTCCCCTCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: FQFKIVNRQCSPSIPSSPTPSRK*MLPSVS
Trigger: ACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGT...TGGGGACGAAGGGATGGAAGGTGAACACTGCCTATTCACTATCTTGAACTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572235.1
CDS-3UTR CCA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCTCTCCAAGGCCTTTTaGCTACCGATAGGAAATCTG +
Preference number: 4 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASLSKAF*LPIGNL
Trigger: CAGATTTCCTATCGGTAGCCAAAAGGCCTTGGAGAG...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGTCCTTGCTGTCTTGCTaGCGCCAGAGTATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASSLLSC*RQSIFL
Trigger: AAGAAAGATACTCTGGCGCCAGCAAGACAGCAAGGA...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp CTTCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTACAGGGCCTTTCTATTTAGGAGACGCTGGTaGGGATGTGGGGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LPLFPHFHPGNCHYRAFLFRRRW*GCGVWG
Trigger: CCCCCAAACCCCACATCCCCACCAGCGTCTCCTAAA...TAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp AAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGCAAGCCAAGCGAGCCTaGCTGCTTCATGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: KRGFKRSRTASSTLSAKWQAKRA*LLHAQQ
Trigger: CTGTTGAGCATGAAGCAGCCAGGCTCGCTTGGCTTG...CCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCAAGCCAAGCGAGCCTaGCTGCTTCATGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLQAKRA*LLHAQQ
Trigger: CTGTTGAGCATGAAGCAGCCAGGCTCGCTTGGCTTG...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp CTGCCCAGTTCCTTACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACACCTTGTCTGCTAAGTaGGTGGCAGAAACACTCAAT +
Preference number: 4 (lower is better)
Translates to: LPSSLHRAGSGCSPRSVNTLSAK*VAETLN
Trigger: ATTGAGTGTTTCTGCCACCCACTTAGCAGACAAGGT...GTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGTAAGGAACTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp GGGCTATCCTTGCTGTCCTCAACGGTGGCTAAGGTTTCAGACCCCAAGATCTTAACCTCCTGTGCAGGCTaGGCTTTCGCTGTGTTTACT +
Preference number: 4 (lower is better)
Translates to: GLSLLSSTVAKVSDPKILTSCAG*AFAVFT
Trigger: AGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGT...TAAGATCTTGGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCAAGGATAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp AGTCACCGATGCTGTGCTGCATACCCGGTGGGACAAAGAGGGGAGCTCGGCCTTGCTGACGAATGTTGTTaGATTCAAAATCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: SHRCCAAYPVGQRGELGLADECC*IQNQQL
Trigger: CAGCTGTTGATTTTGAATCCAACAACATTCGTCAGC...AAGGCCGAGCTCCCCTCTTTGTCCCACCGGGTATGCAGCACAGCATCGGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp AGTTTCTTCCTTTCTCTGGGGAGACACAGAGGTCTTCGCGCCATCCATCTGTTCGGCCAAAACAAAGGGTaGTGCCATCCCTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SFFLSLGRHRGLRAIHLFGQNKG*CHPFSS
Trigger: ACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC...GAACAGATGGATGGCGCGAAGACCTCTGTGTCTCCCCAGAGAAAGGAAGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp GGGCTATCCTTGCTGTCCTCAACGGTGGCTAAGGTTTCAGACCCCAAGATCTTAGGCCAAAACAAAGGGTaGTGCCATCCCTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GLSLLSSTVAKVSDPKILGQNKG*CHPFSS
Trigger: ACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC...TAAGATCTTGGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCAAGGATAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCAAAACAAAGGGTaGTGCCATCCCTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNGQNKG*CHPFSS
Trigger: ACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCACTATTAAACTGCAGCTaGTTCTGGCCTAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASLLNCS*FWPRVR
Trigger: CCTCACCCTAGGCCAGAACCAGCTGCAGTTTAATAG...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572370.5
CDS-3UTR TCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCGATCGCCAAGTTGCTTaGATGTGTAGGAACATTCCT +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLADRQVA*MCRNIP
Trigger: AGGAATGTTCCTACACATTCAAGCAACTTGGCGATC...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCACTGGCCTGGATGAGATaGGTAAAGGTATACTTTGGC +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASLAWMR*VKVYFG
Trigger: GCCAAAGTATACCTTTACTCATCTCATCCAGGCCAG...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCCCTCGGTCAGTAAACTaGGTGACAAACATCTGTAAG +
Preference number: 4 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLPRSVN*VTNICK
Trigger: CTTACAGATGTTTGTCACTCAGTTTACTGACCGAGG...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGGTCTGCATCCAGCTTaGCAGAACAAAGTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASGLHPA*QNKVKA
Trigger: AGCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACC...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTAGCTCCGTATCGGGCTaGTACTTATCGGCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLSSVSG*YLSARS
Trigger: GCTTCTTGCCGATAAGTATCAGCCCGATACGGAGCT...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCCCAAGATCTTAGCATaGGTCACAGCCCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLPKILA*VTAQSS
Trigger: TGAGCTCTGGGCTGTGACTCATGCTAAGATCTTGGG...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp AAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGCGGCCTTCTTTCTGTTaGGAATCTTCGGCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: KRGFKRSRTASSTLSAKWRPSFC*ESSARE
Trigger: CTCCCTAGCCGAAGATTCTCAACAGAAAGAAGGCCG...CCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp CTGCATAATCTTCGCACATATCCTGAAGTTCAGCAGCCACAGCACCCAGAGCTTCGGCCTTCTTTCTGTTaGGAATCTTCGGCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: LHNLRTYPEVQQPQHPELRPSFC*ESSARE
Trigger: CTCCCTAGCCGAAGATTCTCAACAGAAAGAAGGCCG...AAGCTCTGGGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAGATTATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCGGCCTTCTTTCTGTTaGGAATCTTCGGCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLRPSFC*ESSARE
Trigger: CTCCCTAGCCGAAGATTCTCAACAGAAAGAAGGCCG...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp GGGCTATCCTTGCTGTCCTCAACGGTGGCTAAGGTTTCAGACCCCAAGATCTTAGAGCCTACAGCCTCATaGGATATGATCCGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: GLSLLSSTVAKVSDPKILEPTAS*DMIRRY
Trigger: GTACCTTCGGATCATATCTCATGAGGCTGTAGGCTC...TAAGATCTTGGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCAAGGATAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGAAAATGAAACAGAACTaGCCAGGTCAGGACCAACTC +
Preference number: 4 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASKMKQN*PGQDQL
Trigger: GAGTTGGTCCTGACCTGGGCAGTTCTGTTTCATTTT...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp CGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGGTGGCAGAAACACTCGGCAAGAAGCTGCTTTaGTACAGAAGGTCGACTTGT +
Preference number: 4 (lower is better)
Translates to: RSRTASSTLSAKWVAETLGKKLL*YRRSTC
Trigger: ACAAGTCGACCTTCTGTAGCAAAGCAGCTTCTTGCC...GAGTGTTTCTGCCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp CTGCATAATCTTCGCACATATCCTGAAGTTCAGCAGCCACAGCACCCAGAGCTTACATCAAGCTCACTCTaGAACCTCTGGGTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: LHNLRTYPEVQQPQHPELTSSSL*NLWVSG
Trigger: TCCGGAGACCCAGAGGTTGCAGAGTGAGCTTGATGT...AAGCTCTGGGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAGATTATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR GCA 90 bp CTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTTTGTCTGCTGCACTCTaGTTTTACTGTGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: LGLDQERLQTIQNCLLYLLSAAL*FYCEVG
Trigger: GCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAA...AAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp CTTCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTACAGGGCCTTTCTAGTATCCATGGTGCCTTaGGGTCTTTCACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LPLFPHFHPGNCHYRAFLVSMVP*GLSQAA
Trigger: GGCAGCCTGTGAAAGACCGCAAGGCACCATGGATAC...TAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp ACAGCTGCAACCTCCTGTGCAGGCTGGGCTTTCGCTGTGTTTACTGACGAGCCAGCCTCTGTTTTTGCATaGTGTCAATTTCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: TAATSCAGWAFAVFTDEPASVFA*CQFPWL
Trigger: AAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGC...TGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp CTGCCCAGTTCCTTACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACGCCTCTGTTTTTGCATaGTGTCAATTTCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LPSSLHRAGSGCSPRSVNASVFA*CQFPWL
Trigger: AAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGC...GTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGTAAGGAACTGGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR GCA 90 bp GAATGGAACGTTGAAGAAATGTGTGTCTATTATTGTGCACTGACAGCCAGGGGGAGCTGCAACCTCCTGTaGAGGCTGGGCTTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: EWNVEEMCVYYCALTARGSCNLL*RLGFRC
Trigger: ACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGCT...CCCCCTGGCTGTCAGTGCACAATAATAGACACACATTTCTTCAACGTTCCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp TATTTTTCCATCTCTTCCATTCGGCGCATCATGATCTCCAGATCTGGGCTATCCAGCTGCAACCTCCTGTaGAGGCTGGGCTTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: YFSISSIRRIMISRSGLSSCNLL*RLGFRC
Trigger: ACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGCT...GGATAGCCCAGATCTGGAGATCATGATGCGCCGAATGGAAGAGATGGAAAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp CTGCCCAGTTCCTTACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACGGTGAACACAGCTTCTaGATAATCTTCGCACATATC +
Preference number: 4 (lower is better)
Translates to: LPSSLHRAGSGCSPRSVNGEHSF*IIFAHI
Trigger: GATATGTGCGAAGATTATGCAGAAGCTGTGTTCACC...GTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGTAAGGAACTGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR GCA 90 bp TCTGCAACCTCTGGGTCTCCGGAAGCTCCGTATCGGGCTGATACTTATCGGCAATTGTGTTGGTATCAATaGCAGCAAGGGTTCAACAGC +
Preference number: 4 (lower is better)
Translates to: SATSGSPEAPYRADTYRQLCWYQ*QQGFNS
Trigger: GCTGTTGAACCCTTGCTGGCATTGATACCAACACAA...TTGCCGATAAGTATCAGCCCGATACGGAGCTTCCGGAGACCCAGAGGTTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCGATTTCTACTTTGGATaGCTGGTGGCTACACTGACA +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLADFYFG*LVATLT
Trigger: TGTCAGTGTAGCCACCAGCCATCCAAAGTAGAAATC...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCCTTTGGCACCAGAGCTaGAGATTTCTACTTTGGATG +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLALWHQS*RFLLWM
Trigger: CATCCAAAGTAGAAATCTCCAGCTCTGGTGCCAAAG...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp ACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACTGAGTGACAAACATCTGCTCAGTTCTTTCTaGAGTCGCTGGACTTCTAGC +
Preference number: 4 (lower is better)
Translates to: TPSRKWMLPSVSKLSDKHLLSSF*SRWTSS
Trigger: GCTAGAAGTCCAGCGACTCCAGAAAGAACTGAGCAG...ATGTTTGTCACTCAGTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
CDS-3UTR CCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATCTGCTCAGTTCTTTCTaGAGTCGCTGGACTTCTAGC +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNLLSSF*SRWTSS
Trigger: GCTAGAAGTCCAGCGACTCCAGAAAGAACTGAGCAG...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp CTTCAGAGAAAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTCGAATGGCTCCTCGATaGGCAGCCGCCAGCTTAGAC +
Preference number: 4 (lower is better)
Translates to: LQRKIPDDGTGQVIKSSLRMAPR*AAASLD
Trigger: GTCTAAGCTGGCGGCTGCCCATCGAGGAGCCATTCG...AAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTTTCTCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp ACATGCCACGCTGAAGAGTTTAGCTTTCATCCTCTAAGTTACAGAGAGCCACTACGAATGGCTCCTCGATaGGCAGCCGCCAGCTTAGAC +
Preference number: 4 (lower is better)
Translates to: TCHAEEFSFHPLSYREPLRMAPR*AAASLD
Trigger: GTCTAAGCTGGCGGCTGCCCATCGAGGAGCCATTCG...TAGTGGCTCTCTGTAACTTAGAGGATGAAAGCTAAACTCTTCAGCGTGGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572235.1
CDS-3UTR CCA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTACCTCCTGTGCAGGCTaGGCTTTCGCTGTGTTTACT +
Preference number: 4 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLTSCAG*AFAVFT
Trigger: AGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGT...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATCATGATGTTCACGGCTaGATCCTTGCGATCCACTGT +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNHDVHG*ILAIHC
Trigger: ACAGTGGATCGCAAGGATCCAGCCGTGAACATCATG...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp TCTAATACATCAAGCTCACTCTGCAACCTCTGGGTCTCCGGAAGCTCCGTATCGCCTTCTGGGCCTGGATaGACAGCTGAGGATGAAAAT +
Preference number: 4 (lower is better)
Translates to: SNTSSSLCNLWVSGSSVSPSGPG*TAEDEN
Trigger: ATTTTCATCCTCAGCTGTCCATCCAGGCCCAGAAGG...CGATACGGAGCTTCCGGAGACCCAGAGGTTGCAGAGTGAGCTTGATGTATTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR TCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGTCTGCATCCAGCTTaGCAGAACAAAGTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNGLHPA*QNKVKA
Trigger: AGCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACC...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp GGCTACGAATTGAGAGAAAGTCTTTCCAGGCAGTGGCCTGATTCTTACGCACATCCTCTCACCCTTTGGTaGTGTACTTGGCCATCTCTC +
Preference number: 4 (lower is better)
Translates to: GYELRESLSRQWPDSYAHPLTLW*CTWPSL
Trigger: GAGAGATGGCCAAGTACATCACCAAAGGGTGAGAGG...ATGTGCGTAAGAATCAGGCCACTGCCTGGAAAGACTTTCTCTCAATTCGTAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp ATTCGGCGCATCATGATCTCCAGATCTGGGCTATCCTTGCTGTCCTCAACGGTGCTAACACCTCGTCTTTaGAGCTTGCACTTTGGTCTA +
Preference number: 4 (lower is better)
Translates to: IRRIMISRSGLSLLSSTVLTPRL*SLHFGL
Trigger: TAGACCAAAGTGCAAGCTTCAAAGACGAGGTGTTAG...CACCGTTGAGGACAGCAAGGATAGCCCAGATCTGGAGATCATGATGCGCCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR TCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTTTCGCTGTGTTTACTaGCGAGCCATCTTTCAAATG +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLAFRCVY*RAIFQM
Trigger: CATTTGAAAGATGGCTCGTCAGTAAACACAGCGAAA...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp TCTGTAGTAGAATTGACTCTCTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCCCATTCGGCGCATCATaGTCTCCAGATCTGGGCTAT +
Preference number: 4 (lower is better)
Translates to: SVVELTLWALTKRGFKRSPFGAS*SPDLGY
Trigger: ATAGCCCAGATCTGGAGATCATGATGCGCCGAATGG...GGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAGAGAGTCAATTCTACTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCACTGAGCCAGAGGAATaGACATGGTATTTCAATAGG +
Preference number: 4 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLTEPEE*TWYFNR
Trigger: CCTATTGAAATACCATGTTCATTCCTCTGGCTCAGT...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAAAAATGAAACAGAACTaGCCAGGTCAGGACCAACTC +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASKMKQN*PGQDQL
Trigger: GAGTTGGTCCTGACCTGGGCAGTTCTGTTTCATTTT...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp ACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACTGAGTGACAAACATAGGAACAGAAGGGTCTaGATCCAGCTTGACAGAACA +
Preference number: 4 (lower is better)
Translates to: TPSRKWMLPSVSKLSDKHRNRRV*IQLDRT
Trigger: TGTTCTGTCAAGCTGGATGCAGACCCTTCTGTTCCT...ATGTTTGTCACTCAGTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
CDS-3UTR GCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATAGGAACAGAAGGGTCTaGATCCAGCTTGACAGAACA +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNRNRRV*IQLDRT
Trigger: TGTTCTGTCAAGCTGGATGCAGACCCTTCTGTTCCT...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCAAGAAGCTGCTTTaGTACAGAAGGTCGACTTGT +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNGKKLL*YRRSTC
Trigger: ACAAGTCGACCTTCTGTAGCAAAGCAGCTTCTTGCC...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATTACCTCTTTCAGCTTTaGGGAGTCCTTGCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNYLFQL*GVLAVL
Trigger: CAAGACAGCAAGGACTCCGCAAAGCTGAAAGAGGTA...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp ACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACTGAGTGACAAACATTTCAAAATCAACAGCTaGAACCTCCTGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TPSRKWMLPSVSKLSDKHFKINS*NLLCRL
Trigger: CAGCCTGCACAGGAGGTTGCAGCTGTTGATTTTGAA...ATGTTTGTCACTCAGTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR GCA 90 bp GAATGGAACGTTGAAGAAATGTGTGTCTATTATTGTGCACTGACAGCCAGGGGGTCACCGATGCTGTGCTaGATACCCGGTGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: EWNVEEMCVYYCALTARGSPMLC*IPGGTK
Trigger: CTTTGTCCCACCGGGTATGCAGCACAGCATCGGTGA...CCCCCTGGCTGTCAGTGCACAATAATAGACACACATTTCTTCAACGTTCCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCATTGTGTTGGTATCAATaGCAGCAAGGGTTCAACAGC +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASLCWYQ*QQGFNS
Trigger: GCTGTTGAACCCTTGCTGGCATTGATACCAACACAA...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR GCA 90 bp ACAGAGGTCTTCGCGCCATCCATCTGTTCCCTACTCCCACTTGGGTTCCTTTGTCTCAGGCATTCTTTCTaGATGTTTCCTTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: TEVFAPSICSLLPLGFLCLRHSF*MFPSLS
Trigger: GCTCAGTGAAGGAAACATGCAGAAAGAATGCCTGAG...ACAAAGGAACCCAAGTGGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCAATTCTAATGGCATGTaGGCAAGAATATCGGATCGC +
Preference number: 4 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLNSNGM*ARISDR
Trigger: GCGATCCGATATTCTTGCCCACATGCCATTAGAATT...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGTTTCACATCTCTTCTaGCTAGGTGGACAGCATAGC +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNVSHLF*LGGQHS
Trigger: GCTATGCTGTCCACCTAGCCAGAAGAGATGTGAAAC...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp TCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCTTTATGTAGCAGTTTCACATCTCTTCTaGCTAGGTGGACAGCATAGC +
Preference number: 4 (lower is better)
Translates to: SLLQCDTNGLASESLYVAVSHLF*LGGQHS
Trigger: GCTATGCTGTCCACCTAGCCAGAAGAGATGTGAAAC...TGCTACATAAAGGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCATGGAGATTTCTACTTTaGATGGCTGGTGGCTACACT +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASWRFLL*MAGGYT
Trigger: AGTGTAGCCACCAGCCATCCAAAGTAGAAATCTCCA...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp TCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCTTTATGTAGCAGAACAAAGTGAAAGCTaGCGAATAAGGCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SLLQCDTNGLASESLYVAEQSES*RIRLPS
Trigger: ACTGGGCAGCCTTATTCGCCAGCTTTCACTTTGTTC...TGCTACATAAAGGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGAACAAAGTGAAAGCTaGCGAATAAGGCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNEQSES*RIRLPS
Trigger: ACTGGGCAGCCTTATTCGCCAGCTTTCACTTTGTTC...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp TCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTACAGGGCCTTTCTAACACATTTAGGAGACGCTaGTGGGGATGTGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SSVPTLSSRELPLQGLSNTFRRR*WGCGVW
Trigger: CCAAACCCCACATCCCCACCAGCGTCTCCTAAATGT...GTTAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCTGTCTGCTAAGTGGGTaGCAGAAACACTCAATTGTT +
Preference number: 4 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLCLLSG*QKHSIV
Trigger: AACAATTGAGTGTTTCTGCCACCCACTTAGCAGACA...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAACCTTGTCTGCTAAGTaGGTGGCAGAAACACTCAAT +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASTLSAK*VAETLN
Trigger: ATTGAGTGTTTCTGCCACCCACTTAGCAGACAAGGT...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp AAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGGTAGAATTGACTCTCTaGGCCTTGACCAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: KRGFKRSRTASSTLSAKWVELTL*ALTKRG
Trigger: GCCTCTCTTGGTCAAGGCCCAGAGAGTCAATTCTAC...CCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp CTTCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTACAGGGCCTTTCTAGGCCAAAACAAAGGGTaGTGCCATCCCTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LPLFPHFHPGNCHYRAFLGQNKG*CHPFSS
Trigger: ACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC...TAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp CTCTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTCAAGTTGTGTTGCCTaGGCACTGATAAGTGTGATA +
Preference number: 4 (lower is better)
Translates to: LWALTKRGFKRSRTASSTSSCVA*ALISVI
Trigger: TATCACACTTATCAGTGCCCAGGCAACACAACTTGA...GGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGTCAAGTTGTGTTGCCTaGGCACTGATAAGTGTGATA +
Preference number: 4 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASSSCVA*ALISVI
Trigger: TATCACACTTATCAGTGCCCAGGCAACACAACTTGA...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
3UTR CAA 72 bp TGTCTGCTGCACTCTGCTTTTACTGTGAGGTTGGCTTaGTCTACCTCTTTCAGCTTTGCGGAGTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CLLHSAFTVRLA*STSFSFAESLL
Trigger: CAGCAAGGACTCCGCAAAGCTGAAAGAGGTAGACAAAGCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR TCA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTGGCCTGGATGAGATaGGTAAAGGTATACTTTGGC +
Preference number: 4 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLLAWMR*VKVYFG
Trigger: GCCAAAGTATACCTTTACTCATCTCATCCAGGCCAG...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATCTAACACCTCGTCTTTaGAGCTTGCACTTTGGTCTA +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNLTPRL*SLHFGL
Trigger: TAGACCAAAGTGCAAGCTTCAAAGACGAGGTGTTAG...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp GAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGGTGGTTTCGCTGTGTTTACTaGCGAGCCATCTTTCAAATG +
Preference number: 4 (lower is better)
Translates to: EASNDPELPPLPCLLSGWFRCVY*RAIFQM
Trigger: CATTTGAAAGATGGCTCGTCAGTAAACACAGCGAAA...CCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCATTTCGCTGTGTTTACTaGCGAGCCATCTTTCAAATG +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASFRCVY*RAIFQM
Trigger: CATTTGAAAGATGGCTCGTCAGTAAACACAGCGAAA...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCAGCCTCATGAGATATaGTCCGAAGGTACTGCTCAA +
Preference number: 4 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLQPHEI*SEGTAQ
Trigger: TTGAGCAGTACCTTCGGATCATATCTCATGAGGCTG...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp AAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGCAGCCTCATGAGATATaGTCCGAAGGTACTGCTCAA +
Preference number: 4 (lower is better)
Translates to: KRGFKRSRTASSTLSAKWQPHEI*SEGTAQ
Trigger: TTGAGCAGTACCTTCGGATCATATCTCATGAGGCTG...CCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp TCTGTAGTAGAATTGACTCTCTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCTCTTCGCACATATCCTaGAGTTCAGCAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SVVELTLWALTKRGFKRSSSHIS*SSAATA
Trigger: TGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAGA...GGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAGAGAGTCAATTCTACTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCCTAAGAATTCTGAGGTaGACACAGCTTCTGCATAAT +
Preference number: 4 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLLRILR*TQLLHN
Trigger: ATTATGCAGAAGCTGTGTTCACCTCAGAATTCTTAG...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCCTAAGAATTCTGAGGTaGACACAGCTTCTGCATAAT +
Preference number: 4 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLALRILR*TQLLHN
Trigger: ATTATGCAGAAGCTGTGTTCACCTCAGAATTCTTAG...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp TCTGCAACCTCTGGGTCTCCGGAAGCTCCGTATCGGGCTGATACTTATCGGCAATTTTGTGGATACAACTaGTCAGTTCTTTCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SATSGSPEAPYRADTYRQFCGYN*SVLSGV
Trigger: GACTCCAGAAAGAACTGAGCAGTTGTATCCACAAAA...TTGCCGATAAGTATCAGCCCGATACGGAGCTTCCGGAGACCCAGAGGTTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR GCA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTTTGTCTGCTGCACTCTaGTTTTACTGTGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLLSAAL*FYCEVG
Trigger: GCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAA...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp ATTCGGCGCATCATGATCTCCAGATCTGGGCTATCCTTGCTGTCCTCAACGGTGGATGAAACTGTTGTCTaGTGCACTCTGCTTTTACTG +
Preference number: 4 (lower is better)
Translates to: IRRIMISRSGLSLLSSTVDETVV*CTLLLL
Trigger: CAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATC...CACCGTTGAGGACAGCAAGGATAGCCCAGATCTGGAGATCATGATGCGCCGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGATGAAACTGTTGTCTaGTGCACTCTGCTTTTACTG +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASDETVV*CTLLLL
Trigger: CAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATC...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGCCTCTGTTTTTGCATaGTGTCAATTTCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASASVFA*CQFPWL
Trigger: AAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGC...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGTCAAGCCTCTGTTTTTaGATGCTGTCAATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASSSLCF*MLSISL
Trigger: CAAGGAAATTGACAGCATGCAAAAACAGAGGCTTGA...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp TCATCCAGGGAATTGCCATTACAGGGCCTTTCTAACATGATGTTCACGGCTGGACAAACGATCCAGAACTaGCTCCTCTACCTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: SSRELPLQGLSNMMFTAGQTIQN*LLYLVC
Trigger: GCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTG...TCCAGCCGTGAACATCATGTTAGAAAGGCCCTGTAATGGCAATTCCCTGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp ACACTTCTGACCTCATCGGAGACACAGCGAGGTCTGTACCTTCACCCAGGCACATCATTGTTTTCTTCCTaGATCCAAAGTCGAGGATCA +
Preference number: 4 (lower is better)
Translates to: TLLTSSETQRGLYLHPGTSLFSS*IQSRGS
Trigger: TGATCCTCGACTTTGGATGCAGGAAGAAAACAATGA...TGTGCCTGGGTGAAGGTACAGACCTCGCTGTGTCTCCGATGAGGTCAGAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCATTTCATCCAGGGAATTaGCATTACAGGGCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASFHPGN*HYRAFL
Trigger: TAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAA...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCATAATCAAGTTGTGTTaGCTGGGCACTGATAAGTGT +
Preference number: 4 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLIIKLC*LGTDKC
Trigger: ACACTTATCAGTGCCCAGGCAACACAACTTGATTAT...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp AGCCAGACTGTGCTCTCCCTGAGTCTACAGCCTAGTAGGGCCAGAGGTCCTGACCAGCACAGTACAAACTaGCACACAAATTACTTTATA +
Preference number: 4 (lower is better)
Translates to: SQTVLSLSLQPSRARGPDQHSTN*HTNYFI
Trigger: TATAAAGTAATTTGTGTGGCAGTTTGTACTGTGCTG...GTCAGGACCTCTGGCCCTACTAGGCTGTAGACTCAGGGAGAGCACAGTCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp AGTTTCTTCCTTTCTCTGGGGAGACACAGAGGTCTTCGCGCCATCCATCTGTTCTGGAGATTTCTACTTTaGATGGCTGGTGGCTACACT +
Preference number: 4 (lower is better)
Translates to: SFFLSLGRHRGLRAIHLFWRFLL*MAGGYT
Trigger: AGTGTAGCCACCAGCCATCCAAAGTAGAAATCTCCA...GAACAGATGGATGGCGCGAAGACCTCTGTGTCTCCCCAGAGAAAGGAAGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp CTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTGGAGATTTCTACTTTaGATGGCTGGTGGCTACACT +
Preference number: 4 (lower is better)
Translates to: LDQERLQTIQNCLLYLVCWRFLL*MAGGYT
Trigger: AGTGTAGCCACCAGCCATCCAAAGTAGAAATCTCCA...GCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGCGGATCATGGGTGGGTaGCGAATTTGGCACAGTAAG +
Preference number: 4 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWRIMGG*RIWHSK
Trigger: CTTACTGTGCCAAATTCGCCACCCACCCATGATCCG...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTTCCTTGCTGTCTTGCTaGCGCCAGAGTATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLSLLSC*RQSIFL
Trigger: AAGAAAGATACTCTGGCGCCAGCAAGACAGCAAGGA...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATACCTTGTCTGCTAAGTaGGTGGCAGAAACACTCAAT +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNTLSAK*VAETLN
Trigger: ATTGAGTGTTTCTGCCACCCACTTAGCAGACAAGGT...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp GGAACAGAAGGGTCTGCATCCAGCTTGACAGAACAAAGTGAAAGCTGGCGAATACATGATCTCCAGATCTaGGCTATCCTTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GTEGSASSLTEQSESWRIHDLQI*AILAVL
Trigger: GAGGACAGCAAGGATAGCCCAGATCTGGAGATCATG...TATTCGCCAGCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCCTTCTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp ACAGAGGTCTTCGCGCCATCCATCTGTTCCCTACTCCCACTTGGGTTCCTTTGTTCAAGTTGTGTTGCCTaGGCACTGATAAGTGTGATA +
Preference number: 4 (lower is better)
Translates to: TEVFAPSICSLLPLGFLCSSCVA*ALISVI
Trigger: TATCACACTTATCAGTGCCCAGGCAACACAACTTGA...ACAAAGGAACCCAAGTGGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
3UTR CAA 72 bp AGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTaGTCTGCTAAGTGGGTGGCAGAAACACTCAATTGT +
Preference number: 4 (lower is better)
Translates to: RGFKRSRTASST*SAKWVAETLNC
Trigger: ACAATTGAGTGTTTCTGCCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR CAA 72 bp AACTGTTGTCTGCTGCACTCTGCTTTTACTGTGAGGTaGGCTTTGTCTACCTCTTTCAGCTTTGCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: NCCLLHSAFTVR*ALSTSFSFAES
Trigger: GGACTCCGCAAAGCTGAAAGAGGTAGACAAAGCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR TCA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTGATCGCCAAGTTGCTTaGATGTGTAGGAACATTCCT +
Preference number: 4 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLDRQVA*MCRNIP
Trigger: AGGAATGTTCCTACACATTCAAGCAACTTGGCGATC...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp TTCCAGTTCAAGATAGTGAATAGGCAGTGTTCACCTTCCATCCCTTCGTCCCCAGGTCTGCATCCAGCTTaGCAGAACAAAGTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: FQFKIVNRQCSPSIPSSPGLHPA*QNKVKA
Trigger: AGCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACC...TGGGGACGAAGGGATGGAAGGTGAACACTGCCTATTCACTATCTTGAACTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572235.1
CDS-3UTR TCA 90 bp AAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGACTCTGCTTTTACTGTaGGGTTGGCTTTGTCTACCT +
Preference number: 4 (lower is better)
Translates to: KRGFKRSRTASSTLSAKWTLLLL*GWLCLP
Trigger: AGGTAGACAAAGCCAACCTCACAGTAAAAGCAGAGT...CCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGGAGCCTACAGCCTCATaGGATATGATCCGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWEPTAS*DMIRRY
Trigger: GTACCTTCGGATCATATCTCATGAGGCTGTAGGCTC...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp GAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGGTGGCTAAGAATTCTGAGGTaGACACAGCTTCTGCATAAT +
Preference number: 4 (lower is better)
Translates to: EASNDPELPPLPCLLSGWLRILR*TQLLHN
Trigger: ATTATGCAGAAGCTGTGTTCACCTCAGAATTCTTAG...CCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATACTGAGCCAGAGGAATaGACATGGTATTTCAATAGG +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNTEPEE*TWYFNR
Trigger: CCTATTGAAATACCATGTTCATTCCTCTGGCTCAGT...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp ACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACTGAGTGACAAACATAATAGGAATTTAGCATaGAGGAGTGAAGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TPSRKWMLPSVSKLSDKHNRNLA*RSEGGG
Trigger: ACCTCCACCTTCACTCCTTCATGCTAAATTCCTATT...ATGTTTGTCACTCAGTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572235.1
CDS-3UTR GCA 90 bp TGGAACGTTGAAGAAATGTGTGTCTATTATTGTGCACTGACAGCCAGGGGGCTCGGCAAGAAGCTGCTTTaGTACAGAAGGTCGACTTGT +
Preference number: 4 (lower is better)
Translates to: WNVEEMCVYYCALTARGLGKKLL*YRRSTC
Trigger: ACAAGTCGACCTTCTGTAGCAAAGCAGCTTCTTGCC...GAGCCCCCTGGCTGTCAGTGCACAATAATAGACACACATTTCTTCAACGTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCATCAAGCCTCTGTTTTTaGATGCTGTCAATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASSSLCF*MLSISL
Trigger: CAAGGAAATTGACAGCATGCAAAAACAGAGGCTTGA...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp CGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGGTGGCAGAAACACTCTCATTGTTTTCTTCCTaGATCCAAAGTCGAGGATCA +
Preference number: 4 (lower is better)
Translates to: RSRTASSTLSAKWVAETLSLFSS*IQSRGS
Trigger: TGATCCTCGACTTTGGATGCAGGAAGAAAACAATGA...GAGTGTTTCTGCCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATTTTCATCCAGGGAATTaGCATTACAGGGCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNFHPGN*HYRAFL
Trigger: TAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAA...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp TTAATCTGGATGAAACTGTTGTCTGCTGCACTCTGCTTTTACTGTGAGGTTGGCCAGGTTGAAGCTGGCTaGCCTGGTCCCATAATGTCA +
Preference number: 4 (lower is better)
Translates to: LIWMKLLSAALCFYCEVGQVEAG*PGPIMS
Trigger: TGACATTATGGGACCAGGCCAGCCAGCTTCAACCTG...GCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp TCACCCTTTGGTGATGTACTTGGCCATCTCTCCAAGGCCTTTTGGCTACCGATACTTTGGCACCAGAGCTaGAGATTTCTACTTTGGATG +
Preference number: 4 (lower is better)
Translates to: SPFGDVLGHLSKAFWLPILWHQS*RFLLWM
Trigger: CATCCAAAGTAGAAATCTCCAGCTCTGGTGCCAAAG...TATCGGTAGCCAAAAGGCCTTGGAGAGATGGCCAAGTACATCACCAAAGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp TGGAACGTTGAAGAAATGTGTGTCTATTATTGTGCACTGACAGCCAGGGGGCTCTCTTTCTGGAGTCGCTaGACTTCTAGCAGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: WNVEEMCVYYCALTARGLSFWSR*TSSRLF
Trigger: GAAAAGCCTGCTAGAAGTCCAGCGACTCCAGAAAGA...GAGCCCCCTGGCTGTCAGTGCACAATAATAGACACACATTTCTTCAACGTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp CTTCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTACAGGGCCTTTCTACTCTCCAAGGCCTTTTaGCTACCGATAGGAAATCTG +
Preference number: 4 (lower is better)
Translates to: LPLFPHFHPGNCHYRAFLLSKAF*LPIGNL
Trigger: CAGATTTCCTATCGGTAGCCAAAAGGCCTTGGAGAG...TAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCTTGAAGCTTGCACTTTaGTCTAGAATAAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLLKLAL*SRINGP
Trigger: AGGACCATTTATTCTAGACCAAAGTGCAAGCTTCAA...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp GCAGCCACAGCACCCAGAGCTTCATCTACCAGCTCTTCTGAAAAGCTTTCAGCTTGTCTGCTAAGTGGGTaGCAGAAACACTCAATTGTT +
Preference number: 4 (lower is better)
Translates to: AATAPRASSTSSSEKLSACLLSG*QKHSIV
Trigger: AACAATTGAGTGTTTCTGCCACCCACTTAGCAGACA...AGCTGAAAGCTTTTCAGAAGAGCTGGTAGATGAAGCTCTGGGTGCTGTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp TTAATCTGGATGAAACTGTTGTCTGCTGCACTCTGCTTTTACTGTGAGGTTGGCTGCTGTCCTCAACGGTaGCTAAGGTTTCAGACCCCA +
Preference number: 4 (lower is better)
Translates to: LIWMKLLSAALCFYCEVGCCPQR*LRFQTP
Trigger: TGGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCA...GCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp CAAGCCTCTGTTTTTGCATGCTGTCAATTTCCTTGGCTTTTAACTCTTCTAGTTGTGCTGCATACCCGGTaGGACAAAGAGGGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: QASVFACCQFPWLLTLLVVLHTR*DKEGSS
Trigger: CGAGCTCCCCTCTTTGTCCCACCGGGTATGCAGCAC...AACTAGAAGAGTTAAAAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGCCTTCTGGGCCTGGATaGACAGCTGAGGATGAAAAT +
Preference number: 4 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWPSGPG*TAEDEN
Trigger: ATTTTCATCCTCAGCTGTCCATCCAGGCCCAGAAGG...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp GGCTACGAATTGAGAGAAAGTCTTTCCAGGCAGTGGCCTGATTCTTACGCACATAGTCTTTCCAGGCAGTaGCCTGATTCTTACGCACAT +
Preference number: 4 (lower is better)
Translates to: GYELRESLSRQWPDSYAHSLSRQ*PDSYAH
Trigger: ATGTGCGTAAGAATCAGGCCACTGCCTGGAAAGACT...ATGTGCGTAAGAATCAGGCCACTGCCTGGAAAGACTTTCTCTCAATTCGTAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp CTTCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTACAGGGCCTTTCTAGATCGCCAAGTTGCTTaGATGTGTAGGAACATTCCT +
Preference number: 4 (lower is better)
Translates to: LPLFPHFHPGNCHYRAFLDRQVA*MCRNIP
Trigger: AGGAATGTTCCTACACATTCAAGCAACTTGGCGATC...TAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR TCA 90 bp GGAACAGAAGGGTCTGCATCCAGCTTGACAGAACAAAGTGAAAGCTGGCGAATACCTCGGTCAGTAAACTaGGTGACAAACATCTGTAAG +
Preference number: 4 (lower is better)
Translates to: GTEGSASSLTEQSESWRIPRSVN*VTNICK
Trigger: CTTACAGATGTTTGTCACTCAGTTTACTGACCGAGG...TATTCGCCAGCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCCTTCTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
CDS-3UTR TCA 90 bp TCCAGAACTATATCCGCATCTAATACATCAAGCTCACTCTGCAACCTCTGGGTCGGTCTGCATCCAGCTTaGCAGAACAAAGTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: SRTISASNTSSSLCNLWVGLHPA*QNKVKA
Trigger: AGCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACC...GACCCAGAGGTTGCAGAGTGAGCTTGATGTATTAGATGCGGATATAGTTCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR TCA 90 bp TGGAACGTTGAAGAAATGTGTGTCTATTATTGTGCACTGACAGCCAGGGGGCTCACTCTGCTTTTACTGTaGGGTTGGCTTTGTCTACCT +
Preference number: 4 (lower is better)
Translates to: WNVEEMCVYYCALTARGLTLLLL*GWLCLP
Trigger: AGGTAGACAAAGCCAACCTCACAGTAAAAGCAGAGT...GAGCCCCCTGGCTGTCAGTGCACAATAATAGACACACATTTCTTCAACGTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp CTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCCTAAGAATTCTGAGGTaGACACAGCTTCTGCATAAT +
Preference number: 4 (lower is better)
Translates to: LDQERLQTIQNCLLYLVCLRILR*TQLLHN
Trigger: ATTATGCAGAAGCTGTGTTCACCTCAGAATTCTTAG...GCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp CAATGCCAGCAAGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATTTCCAGGCAGTGGCCTaGTTCTTACGCACATTCCGT +
Preference number: 4 (lower is better)
Translates to: QCQQGFNSNLNPCVKYTYFQAVA*FLRTFR
Trigger: ACGGAATGTGCGTAAGAATCAGGCCACTGCCTGGAA...ATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCTTGCTGGCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGGAGAAAAATCCCAGATaGCGGCACTGGACAGGTTAT +
Preference number: 4 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWEKNPR*RHWTGY
Trigger: ATAACCTGTCCAGTGCCGTCATCTGGGATTTTTCTC...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCACTTAGACATTGCCCATaGCTTTCCATTGATCTTTTT +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASLRHCP*LSIDLF
Trigger: AAAAAGATCAATGGAAAGTCATGGGCAATGTCTAAG...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572370.5
CDS-3UTR GCA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGTACCTCTTTCAGCTTTaGGGAGTCCTTGCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWYLFQL*GVLAVL
Trigger: CAAGACAGCAAGGACTCCGCAAAGCTGAAAGAGGTA...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp CTGCATAATCTTCGCACATATCCTGAAGTTCAGCAGCCACAGCACCCAGAGCTTGATGAAACTGTTGTCTaGTGCACTCTGCTTTTACTG +
Preference number: 4 (lower is better)
Translates to: LHNLRTYPEVQQPQHPELDETVV*CTLLLL
Trigger: CAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATC...AAGCTCTGGGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAGATTATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp TTTTGGTCATTGTTTTCTTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTAGCCTGGCTGCTTCATaGTCAACAGCACCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: FWSLFSSCIQSRGSAYAISLAAS*STAPVR
Trigger: CCTGACAGGTGCTGTTGAGCATGAAGCAGCCAGGCT...AATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAACAATGACCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATTCATTGTTTTCTTCCTaGATCCAAAGTCGAGGATCA +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNSLFSS*IQSRGS
Trigger: TGATCCTCGACTTTGGATGCAGGAAGAAAACAATGA...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp TCACCCTTTGGTGATGTACTTGGCCATCTCTCCAAGGCCTTTTGGCTACCGATAAATTCTAATGGCATGTaGGCAAGAATATCGGATCGC +
Preference number: 4 (lower is better)
Translates to: SPFGDVLGHLSKAFWLPINSNGM*ARISDR
Trigger: GCGATCCGATATTCTTGCCCACATGCCATTAGAATT...TATCGGTAGCCAAAAGGCCTTGGAGAGATGGCCAAGTACATCACCAAAGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAACCTCTTCAATTTTGTaGATACAACTGCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASTSSIL*IQLLSS
Trigger: AGAACTGAGCAGTTGTATCCACAAAATTGAAGAGGT...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp TGTTGGAGTCTATACATTTCTTCAGCTTTGAGCTCATTCAGTTCCTTTGTTCTTTCTGTAAGGCCCGAATaGCTCCTCGATGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: CWSLYISSALSSFSSFVLSVRPE*LLDGQP
Trigger: CGGCTGCCCATCGAGGAGCCATTCGGGCCTTACAGA...AAGAACAAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTATAGACTCCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp AGCTTAAATCACCTGAAATTCTTGTACTTCAGAGAAAAATCCCAGATGACGGCATTTAGGAGACGCTGGTaGGGATGTGGGGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SLNHLKFLYFREKSQMTAFRRRW*GCGVWG
Trigger: CCCCCAAACCCCACATCCCCACCAGCGTCTCCTAAA...TGCCGTCATCTGGGATTTTTCTCTGAAGTACAAGAATTTCAGGTGATTTAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp GGGCTATCCTTGCTGTCCTCAACGGTGGCTAAGGTTTCAGACCCCAAGATCTTAGCTGACGAATGTTGTTaGATTCAAAATCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: GLSLLSSTVAKVSDPKILADECC*IQNQQL
Trigger: CAGCTGTTGATTTTGAATCCAACAACATTCGTCAGC...TAAGATCTTGGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCAAGGATAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp TCATTTTTAATCTGGATGAAACTGTTGTCTGCTGCACTCTGCTTTTACTGTGAGCTGCCTTCCTTTCAGTaGGCAGCACCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SFLIWMKLLSAALCFYCELPSFQ*AAPSGP
Trigger: AGGCCCAGAAGGTGCTGCCCACTGAAAGGAAGGCAG...CTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAAAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570790.5
3UTR CAA 72 bp CAGGCTGCCGGTTCATTTTTAATCTGGATGAAACTGTaGTCTGCTGCACTCTGCTTTTACTGTGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: QAAGSFLIWMKL*SAALCFYCEVG
Trigger: GCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAAAAATGAACCGGCAGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR CAA 72 bp ATAACCACATCAGGAACAGAAGGGTCTGCATCCAGCTaGACAGAACAAAGTGAAAGCTGGCGAATAAGGCTG +
Preference number: 4 (lower is better)
Translates to: ITTSGTEGSASS*TEQSESWRIRL
Trigger: CAGCCTTATTCGCCAGCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCCTTCTGTTCCTGATGTGGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
CDS-3UTR TCA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGCTAACACCTCGTCTTTaGAGCTTGCACTTTGGTCTA +
Preference number: 4 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWLTPRL*SLHFGL
Trigger: TAGACCAAAGTGCAAGCTTCAAAGACGAGGTGTTAG...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp AGCCAATCAAGCCTCTGTTTTTGCATGCTGTCAATTTCCTTGGCTTTTAACTCTCCCAAGATCTTAGCATaGGTCACAGCCCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SQSSLCFCMLSISLAFNSPKILA*VTAQSS
Trigger: TGAGCTCTGGGCTGTGACTCATGCTAAGATCTTGGG...AGAGTTAAAAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGCTTGATTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp CAATGCCAGCAAGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATAGGGCCTTTCTAACATaGTGTTCACGGCTGGATCCT +
Preference number: 4 (lower is better)
Translates to: QCQQGFNSNLNPCVKYTYRAFLT*CSRLDP
Trigger: AGGATCCAGCCGTGAACATCATGTTAGAAAGGCCCT...ATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCTTGCTGGCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR TCA 90 bp TCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTACAGGGCCTTTCTAACATCTACCAGCTCTTCTaGAAAGCTTTCAGCTATCAG +
Preference number: 4 (lower is better)
Translates to: SSVPTLSSRELPLQGLSNIYQLF*KAFSYQ
Trigger: CTGATAGCTGAAAGCTTTTCAGAAGAGCTGGTAGAT...GTTAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp GGAACAGAAGGGTCTGCATCCAGCTTGACAGAACAAAGTGAAAGCTGGCGAATAATCTACCAGCTCTTCTaGAAAGCTTTCAGCTATCAG +
Preference number: 4 (lower is better)
Translates to: GTEGSASSLTEQSESWRIIYQLF*KAFSYQ
Trigger: CTGATAGCTGAAAGCTTTTCAGAAGAGCTGGTAGAT...TATTCGCCAGCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCCTTCTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR TCA 90 bp GGCTACGAATTGAGAGAAAGTCTTTCCAGGCAGTGGCCTGATTCTTACGCACATGGTTCCTTTGTGGTATaGAATAGAGACACTTCTGAC +
Preference number: 4 (lower is better)
Translates to: GYELRESLSRQWPDSYAHGSFVV*NRDTSD
Trigger: GTCAGAAGTGTCTCTATTTCATACCACAAAGGAACC...ATGTGCGTAAGAATCAGGCCACTGCCTGGAAAGACTTTCTCTCAATTCGTAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGTGGAGGACCAGGCTATaGTGGTTCTTAAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWWRTRL*WFLSFF
Trigger: GAAGAAACTTAAGAACCATCATAGCCTGGTCCTCCA...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGAAAATGAAACAGAACTaGCCAGGTCAGGACCAACTC +
Preference number: 4 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWKMKQN*PGQDQL
Trigger: GAGTTGGTCCTGACCTGGGCAGTTCTGTTTCATTTT...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATCATTTCCAGAACCATTaGCATGACAAAAGAAAATGC +
Preference number: 4 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNHFQNH*HDKRKC
Trigger: GCATTTTCTTTTGTCATGGCAATGGTTCTGGAAATG...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTTTCCTTTCCACCCTGTaGTCGGGTATTTTATACTTA +
Preference number: 4 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLFLSTL*SGILYL
Trigger: TAAGTATAAAATACCCGACCACAGGGTGGAAAGGAA...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp ACATGCCACGCTGAAGAGTTTAGCTTTCATCCTCTAAGTTACAGAGAGCCACTATCTTTCTGGAGTCGCTaGACTTCTAGCAGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: TCHAEEFSFHPLSYREPLSFWSR*TSSRLF
Trigger: GAAAAGCCTGCTAGAAGTCCAGCGACTCCAGAAAGA...TAGTGGCTCTCTGTAACTTAGAGGATGAAAGCTAAACTCTTCAGCGTGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572235.1
CDS-3UTR CCA 90 bp CAATGCCAGCAAGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATCTGCTCAGTTCTTTCTaGAGTCGCTGGACTTCTAGC +
Preference number: 4 (lower is better)
Translates to: QCQQGFNSNLNPCVKYTYLLSSF*SRWTSS
Trigger: GCTAGAAGTCCAGCGACTCCAGAAAGAACTGAGCAG...ATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCTTGCTGGCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CCA 90 bp AGTTTCTTCCTTTCTCTGGGGAGACACAGAGGTCTTCGCGCCATCCATCTGTTCACCTCTTCAATTTTGTaGATACAACTGCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: SFFLSLGRHRGLRAIHLFTSSIL*IQLLSS
Trigger: AGAACTGAGCAGTTGTATCCACAAAATTGAAGAGGT...GAACAGATGGATGGCGCGAAGACCTCTGTGTCTCCCCAGAGAAAGGAAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp ACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACTGAGTGACAAACATACCTCTTCAATTTTGTaGATACAACTGCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TPSRKWMLPSVSKLSDKHTSSIL*IQLLSS
Trigger: AGAACTGAGCAGTTGTATCCACAAAATTGAAGAGGT...ATGTTTGTCACTCAGTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
CDS-3UTR CCA 90 bp CATATAAAAGTATTCTCAGTGGTTTCTGTAAATCACATTTCACTTTGCCTGTGGTCTGTAAGGCCCGAATaGCTCCTCGATGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: HIKVFSVVSVNHISLCLWSVRPE*LLDGQP
Trigger: CGGCTGCCCATCGAGGAGCCATTCGGGCCTTACAGA...CCACAGGCAAAGTGAAATGTGATTTACAGAAACCACTGAGAATACTTTTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp AGCTTAAATCACCTGAAATTCTTGTACTTCAGAGAAAAATCCCAGATGACGGCACAAGCCAAGCGAGCCTaGCTGCTTCATGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: SLNHLKFLYFREKSQMTAQAKRA*LLHAQQ
Trigger: CTGTTGAGCATGAAGCAGCCAGGCTCGCTTGGCTTG...TGCCGTCATCTGGGATTTTTCTCTGAAGTACAAGAATTTCAGGTGATTTAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp CTTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTTGACCAAGCCAAGCGAGCCTaGCTGCTTCATGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: LPASKVEDQHMRFYYIFDQAKRA*LLHAQQ
Trigger: CTGTTGAGCATGAAGCAGCCAGGCTCGCTTGGCTTG...GTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp AGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATCGATTATCTTTAGCTGGTTCTGGGTCTaGAGTACTTTGGGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: RVQQQPESLCEIYVSIIFSWFWV*STLGSL
Trigger: GAGCGACCCCAAAGTACTTCAGACCCAGAACCAGCT...AAAGATAATCGATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR TCA 90 bp ACATGCCACGCTGAAGAGTTTAGCTTTCATCCTCTAAGTTACAGAGAGCCACTACCTCGGTCAGTAAACTaGGTGACAAACATCTGTAAG +
Preference number: 4 (lower is better)
Translates to: TCHAEEFSFHPLSYREPLPRSVN*VTNICK
Trigger: CTTACAGATGTTTGTCACTCAGTTTACTGACCGAGG...TAGTGGCTCTCTGTAACTTAGAGGATGAAAGCTAAACTCTTCAGCGTGGCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572235.1
CDS-3UTR TCA 90 bp CCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTTGACGAACAGACTCCCTCTCACCCTTTGGTaGTGTACTTGGCCATCTCTC +
Preference number: 4 (lower is better)
Translates to: PKSRISICDFIISLTNRLPLTLW*CTWPSL
Trigger: GAGAGATGGCCAAGTACATCACCAAAGGGTGAGAGG...GAGTCTGTTCGTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp TATTTTTCCATCTCTTCCATTCGGCGCATCATGATCTCCAGATCTGGGCTATCCTTTCGCTGTGTTTACTaGCGAGCCATCTTTCAAATG +
Preference number: 4 (lower is better)
Translates to: YFSISSIRRIMISRSGLSFRCVY*RAIFQM
Trigger: CATTTGAAAGATGGCTCGTCAGTAAACACAGCGAAA...GGATAGCCCAGATCTGGAGATCATGATGCGCCGAATGGAAGAGATGGAAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp AGCTTAAATCACCTGAAATTCTTGTACTTCAGAGAAAAATCCCAGATGACGGCACGGCCTTCTTTCTGTTaGGAATCTTCGGCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: SLNHLKFLYFREKSQMTARPSFC*ESSARE
Trigger: CTCCCTAGCCGAAGATTCTCAACAGAAAGAAGGCCG...TGCCGTCATCTGGGATTTTTCTCTGAAGTACAAGAATTTCAGGTGATTTAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp CCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTTGACGAACAGACTCTACAGTAGTCACCGATaGTGTGCTGCATACCCGGTG +
Preference number: 4 (lower is better)
Translates to: PKSRISICDFIISLTNRLYSSHR*CAAYPV
Trigger: CACCGGGTATGCAGCACAGCATCGGTGACTACTGTA...GAGTCTGTTCGTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCATTTCCAGAACCATTaGCATGACAAAAGAAAATGC +
Preference number: 4 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLHFQNH*HDKRKC
Trigger: GCATTTTCTTTTGTCATGGCAATGGTTCTGGAAATG...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp TCATTTTTAATCTGGATGAAACTGTTGTCTGCTGCACTCTGCTTTTACTGTGAGGTCCCGGCAAGAAGCTaGTTTGCTACAGAAGGTCGA +
Preference number: 4 (lower is better)
Translates to: SFLIWMKLLSAALCFYCEVPARS*FATEGR
Trigger: TCGACCTTCTGTAGCAAAGCAGCTTCTTGCCGGGAC...CTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAAAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542826.6
CDS-3UTR CCA 90 bp CTTCAGAGAAAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTCTTTGGCACCAGAGCTaGAGATTTCTACTTTGGATG +
Preference number: 4 (lower is better)
Translates to: LQRKIPDDGTGQVIKSSLLWHQS*RFLLWM
Trigger: CATCCAAAGTAGAAATCTCCAGCTCTGGTGCCAAAG...AAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTTTCTCTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp CATATAAAAGTATTCTCAGTGGTTTCTGTAAATCACATTTCACTTTGCCTGTGGGTCCCGGATCATGGGTaGGTGGCGAATTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: HIKVFSVVSVNHISLCLWVPDHG*VANLAQ
Trigger: CTGTGCCAAATTCGCCACCCACCCATGATCCGGGAC...CCACAGGCAAAGTGAAATGTGATTTACAGAAACCACTGAGAATACTTTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp TCATTTTTAATCTGGATGAAACTGTTGTCTGCTGCACTCTGCTTTTACTGTGAGGTTTGGGGGTATCCATaGTGCCTTGCGGTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: SFLIWMKLLSAALCFYCEVWGYP*CLAVFH
Trigger: GTGAAAGACCGCAAGGCACCATGGATACCCCCAAAC...CTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAAAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAATTTAGGAGACGCTGGTaGGGATGTGGGGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEFRRRW*GCGVWG
Trigger: CCCCCAAACCCCACATCCCCACCAGCGTCTCCTAAA...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGTGTCTGCTAAGTGGGTaGCAGAAACACTCAATTGTT +
Preference number: 4 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWCLLSG*QKHSIV
Trigger: AACAATTGAGTGTTTCTGCCACCCACTTAGCAGACA...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp CAAATGAATATTTGCTTCTGTAGTAGAATTGACTCTCTGGGCCTTGACCAAGAGGTAGAATTGACTCTCTaGGCCTTGACCAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QMNICFCSRIDSLGLDQEVELTL*ALTKRG
Trigger: GCCTCTCTTGGTCAAGGCCCAGAGAGTCAATTCTAC...CTCTTGGTCAAGGCCCAGAGAGTCAATTCTACTACAGAAGCAAATATTCATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp AGCTTAAATCACCTGAAATTCTTGTACTTCAGAGAAAAATCCCAGATGACGGCAACCTCCTGTGCAGGCTaGGCTTTCGCTGTGTTTACT +
Preference number: 4 (lower is better)
Translates to: SLNHLKFLYFREKSQMTATSCAG*AFAVFT
Trigger: AGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGT...TGCCGTCATCTGGGATTTTTCTCTGAAGTACAAGAATTTCAGGTGATTTAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp TCATTTTTAATCTGGATGAAACTGTTGTCTGCTGCACTCTGCTTTTACTGTGAGTGCTGTCCTCAACGGTaGCTAAGGTTTCAGACCCCA +
Preference number: 4 (lower is better)
Translates to: SFLIWMKLLSAALCFYCECCPQR*LRFQTP
Trigger: TGGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCA...CTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAAAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
3UTR CAA 72 bp CCTGCTTTTGTTTTTGCCACGGCTAACACCTCGTCTTaGAAGCTTGCACTTTGGTCTAGAATAAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: PAFVFATANTSS*KLALWSRINGP
Trigger: AGGACCATTTATTCTAGACCAAAGTGCAAGCTTCAAAGACGAGGTGTTAGCCGTGGCAAAAACAAAAGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR TCA 90 bp AGCCAATCAAGCCTCTGTTTTTGCATGCTGTCAATTTCCTTGGCTTTTAACTCTCAGCCTCATGAGATATaGTCCGAAGGTACTGCTCAA +
Preference number: 4 (lower is better)
Translates to: SQSSLCFCMLSISLAFNSQPHEI*SEGTAQ
Trigger: TTGAGCAGTACCTTCGGATCATATCTCATGAGGCTG...AGAGTTAAAAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGCTTGATTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAACTATCAGCCACGGGTTaGAGGAGCCTACAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEELSATG*RSLQPH
Trigger: ATGAGGCTGTAGGCTCCTTCAACCCGTGGCTGATAG...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp CATATAAAAGTATTCTCAGTGGTTTCTGTAAATCACATTTCACTTTGCCTGTGGGGCCTGGTCCTCTCCTaGTTCCTCAAACTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HIKVFSVVSVNHISLCLWGLVLS*FLKLPL
Trigger: CAGAGGAAGTTTGAGGAATCAGGAGAGGACCAGGCC...CCACAGGCAAAGTGAAATGTGATTTACAGAAACCACTGAGAATACTTTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp AGCTTAAATCACCTGAAATTCTTGTACTTCAGAGAAAAATCCCAGATGACGGCACCTCAGGCTACGAATTaGGAGAAAGTCTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SLNHLKFLYFREKSQMTAPQATN*EKVFPG
Trigger: GCCTGGAAAGACTTTCTCTCAATTCGTAGCCTGAGG...TGCCGTCATCTGGGATTTTTCTCTGAAGTACAAGAATTTCAGGTGATTTAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp CATATAAAAGTATTCTCAGTGGTTTCTGTAAATCACATTTCACTTTGCCTGTGGCGAGCAGGAAGTGGATaGTCCCCTCGGTCAGTAAAC +
Preference number: 4 (lower is better)
Translates to: HIKVFSVVSVNHISLCLWRAGSG*SPRSVN
Trigger: GTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCG...CCACAGGCAAAGTGAAATGTGATTTACAGAAACCACTGAGAATACTTTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAACGAGCAGGAAGTGGATaGTCCCCTCGGTCAGTAAAC +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEERAGSG*SPRSVN
Trigger: GTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCG...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAATGGGAATGTGTCCTTTaGTGTGAGGGGCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEWECVL*CEGPPL
Trigger: GAGAGGAGGCCCCTCACAGCAAAGGACACATTCCCA...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAAGTATCCATGGTGCCTTaGGGTCTTTCACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEVSMVP*GLSQAA
Trigger: GGCAGCCTGTGAAAGACCGCAAGGCACCATGGATAC...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp TTGGAGTCTATACATTTCTTCAGCTTTGAGCTCATTCAGTTCCTTTGTTCTTCTGATCTGGGCTATCCTTaGTGTCCTCAACGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: LESIHFFSFELIQFLCSSDLGYP*CPQRWL
Trigger: TAGCCACCGTTGAGGACAGCAAGGATAGCCCAGATC...AGAAGAACAAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTATAGACTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp TATTTTTCCATCTCTTCCATTCGGCGCATCATGATCTCCAGATCTGGGCTATCCTCATTGTTTTCTTCCTaGATCCAAAGTCGAGGATCA +
Preference number: 4 (lower is better)
Translates to: YFSISSIRRIMISRSGLSSLFSS*IQSRGS
Trigger: TGATCCTCGACTTTGGATGCAGGAAGAAAACAATGA...GGATAGCCCAGATCTGGAGATCATGATGCGCCGAATGGAAGAGATGGAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp CTTCAGAGAAAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTTTTCATCCAGGGAATTaGCATTACAGGGCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: LQRKIPDDGTGQVIKSSLFHPGN*HYRAFL
Trigger: TAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAA...AAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTTTCTCTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp TCCAGAACTATATCCGCATCTAATACATCAAGCTCACTCTGCAACCTCTGGGTCATAATCAAGTTGTGTTaGCTGGGCACTGATAAGTGT +
Preference number: 4 (lower is better)
Translates to: SRTISASNTSSSLCNLWVIIKLC*LGTDKC
Trigger: ACACTTATCAGTGCCCAGGCAACACAACTTGATTAT...GACCCAGAGGTTGCAGAGTGAGCTTGATGTATTAGATGCGGATATAGTTCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp AGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATCGATTATCTTTCAGGTTGAAGCTGGCTaGCCTGGTCCCATAATGTCA +
Preference number: 4 (lower is better)
Translates to: RVQQQPESLCEIYVSIIFQVEAG*PGPIMS
Trigger: TGACATTATGGGACCAGGCCAGCCAGCTTCAACCTG...AAAGATAATCGATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CCA 90 bp GGAACAGAAGGGTCTGCATCCAGCTTGACAGAACAAAGTGAAAGCTGGCGAATAACCTCTTCAATTTTGTaGATACAACTGCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GTEGSASSLTEQSESWRITSSIL*IQLLSS
Trigger: AGAACTGAGCAGTTGTATCCACAAAATTGAAGAGGT...TATTCGCCAGCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCCTTCTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
CDS-3UTR CCA 90 bp CATATAAAAGTATTCTCAGTGGTTTCTGTAAATCACATTTCACTTTGCCTGTGGTCACTCTGCAACCTCTaGGTCTCCGGAAGCTCCGTA +
Preference number: 4 (lower is better)
Translates to: HIKVFSVVSVNHISLCLWSLCNL*VSGSSV
Trigger: TACGGAGCTTCCGGAGACCCAGAGGTTGCAGAGTGA...CCACAGGCAAAGTGAAATGTGATTTACAGAAACCACTGAGAATACTTTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAATCACTCTGCAACCTCTaGGTCTCCGGAAGCTCCGTA +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEESLCNL*VSGSSV
Trigger: TACGGAGCTTCCGGAGACCCAGAGGTTGCAGAGTGA...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp AGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATCGATTATCTTTTGCTGTCCTCAACGGTaGCTAAGGTTTCAGACCCCA +
Preference number: 4 (lower is better)
Translates to: RVQQQPESLCEIYVSIIFCCPQR*LRFQTP
Trigger: TGGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCA...AAAGATAATCGATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CCA 90 bp TCATTTTTAATCTGGATGAAACTGTTGTCTGCTGCACTCTGCTTTTACTGTGAGCATGATGTTCACGGCTaGATCCTTGCGATCCACTGT +
Preference number: 4 (lower is better)
Translates to: SFLIWMKLLSAALCFYCEHDVHG*ILAIHC
Trigger: ACAGTGGATCGCAAGGATCCAGCCGTGAACATCATG...CTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAAAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAACCTCTCACCCTTTGGTaGTGTACTTGGCCATCTCTC +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEPLTLW*CTWPSL
Trigger: GAGAGATGGCCAAGTACATCACCAAAGGGTGAGAGG...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp TTTTGGTCATTGTTTTCTTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTACTCTGCTTTTACTGTaGGGTTGGCTTTGTCTACCT +
Preference number: 4 (lower is better)
Translates to: FWSLFSSCIQSRGSAYAITLLLL*GWLCLP
Trigger: AGGTAGACAAAGCCAACCTCACAGTAAAAGCAGAGT...AATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAACAATGACCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp CTTCAGAGAAAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTTTTTGTGGATACAACTaGTCAGTTCTTTCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: LQRKIPDDGTGQVIKSSLFCGYN*SVLSGV
Trigger: GACTCCAGAAAGAACTGAGCAGTTGTATCCACAAAA...AAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTTTCTCTGAAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp CTTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTTGACAGGAACAGAAGGGTCTaGATCCAGCTTGACAGAACA +
Preference number: 4 (lower is better)
Translates to: LPASKVEDQHMRFYYIFDRNRRV*IQLDRT
Trigger: TGTTCTGTCAAGCTGGATGCAGACCCTTCTGTTCCT...GTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR GCA 90 bp CAATGCCAGCAAGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATGATGAAACTGTTGTCTaGTGCACTCTGCTTTTACTG +
Preference number: 4 (lower is better)
Translates to: QCQQGFNSNLNPCVKYTYDETVV*CTLLLL
Trigger: CAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATC...ATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCTTGCTGGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR GCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAAGATCTGGGCTATCCTTaGTGTCCTCAACGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEDLGYP*CPQRWL
Trigger: TAGCCACCGTTGAGGACAGCAAGGATAGCCCAGATC...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp AGCTTAAATCACCTGAAATTCTTGTACTTCAGAGAAAAATCCCAGATGACGGCAGAACAAAGTGAAAGCTaGCGAATAAGGCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SLNHLKFLYFREKSQMTAEQSES*RIRLPS
Trigger: ACTGGGCAGCCTTATTCGCCAGCTTTCACTTTGTTC...TGCCGTCATCTGGGATTTTTCTCTGAAGTACAAGAATTTCAGGTGATTTAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp CAATGCCAGCAAGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATTGTCTGCTAAGTGGGTaGCAGAAACACTCAATTGTT +
Preference number: 4 (lower is better)
Translates to: QCQQGFNSNLNPCVKYTYCLLSG*QKHSIV
Trigger: AACAATTGAGTGTTTCTGCCACCCACTTAGCAGACA...ATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCTTGCTGGCATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CCA 90 bp TTTTGGTCATTGTTTTCTTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTACCTTGTCTGCTAAGTaGGTGGCAGAAACACTCAAT +
Preference number: 4 (lower is better)
Translates to: FWSLFSSCIQSRGSAYAITLSAK*VAETLN
Trigger: ATTGAGTGTTTCTGCCACCCACTTAGCAGACAAGGT...AATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAACAATGACCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CCA 90 bp TGTTGGAGTCTATACATTTCTTCAGCTTTGAGCTCATTCAGTTCCTTTGTTCTTCATGATCTCCAGATCTaGGCTATCCTTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: CWSLYISSALSSFSSFVLHDLQI*AILAVL
Trigger: GAGGACAGCAAGGATAGCCCAGATCTGGAGATCATG...AAGAACAAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTATAGACTCCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR TCA 90 bp CATATAAAAGTATTCTCAGTGGTTTCTGTAAATCACATTTCACTTTGCCTGTGGCTTGCTCCTGTCTCCTaGTACGGATTCGACGTTCTT +
Preference number: 4 (lower is better)
Translates to: HIKVFSVVSVNHISLCLWLAPVS*YGFDVL
Trigger: AAGAACGTCGAATCCGTATCAGGAGACAGGAGCAAG...CCACAGGCAAAGTGAAATGTGATTTACAGAAACCACTGAGAATACTTTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAACTTGCTCCTGTCTCCTaGTACGGATTCGACGTTCTT +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEELAPVS*YGFDVL
Trigger: AAGAACGTCGAATCCGTATCAGGAGACAGGAGCAAG...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000572370.5
CDS-3UTR TCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAAGAGCCTACAGCCTCATaGGATATGATCCGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEEPTAS*DMIRRY
Trigger: GTACCTTCGGATCATATCTCATGAGGCTGTAGGCTC...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAAGCATGTTTCCTTCACTaGGCCTCAGGCTACGAATTG +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEACFLH*ASGYEL
Trigger: CAATTCGTAGCCTGAGGCTCAGTGAAGGAAACATGC...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp ACATGCCACGCTGAAGAGTTTAGCTTTCATCCTCTAAGTTACAGAGAGCCACTACTTAGACATTGCCCATaGCTTTCCATTGATCTTTTT +
Preference number: 4 (lower is better)
Translates to: TCHAEEFSFHPLSYREPLLRHCP*LSIDLF
Trigger: AAAAAGATCAATGGAAAGTCATGGGCAATGTCTAAG...TAGTGGCTCTCTGTAACTTAGAGGATGAAAGCTAAACTCTTCAGCGTGGCATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572235.1
CDS-3UTR GCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAACAAACGATCCAGAACTaGCTCCTCTACCTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEQTIQN*LLYLVC
Trigger: GCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTG...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp TTTTGGTCATTGTTTTCTTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTGGTGAACACAGCTTCTaGATAATCTTCGCACATATC +
Preference number: 4 (lower is better)
Translates to: FWSLFSSCIQSRGSAYAIGEHSF*IIFAHI
Trigger: GATATGTGCGAAGATTATGCAGAAGCTGTGTTCACC...AATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAACAATGACCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp CATATAAAAGTATTCTCAGTGGTTTCTGTAAATCACATTTCACTTTGCCTGTGGGTGTGTCTATTATTGTaGACTGACAGCCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: HIKVFSVVSVNHISLCLWVCLLL*TDSQGA
Trigger: AGCCCCCTGGCTGTCAGTGCACAATAATAGACACAC...CCACAGGCAAAGTGAAATGTGATTTACAGAAACCACTGAGAATACTTTTATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp TCATTTTTAATCTGGATGAAACTGTTGTCTGCTGCACTCTGCTTTTACTGTGAGGATTTCTACTTTGGATaGCTGGTGGCTACACTGACA +
Preference number: 4 (lower is better)
Translates to: SFLIWMKLLSAALCFYCEDFYFG*LVATLT
Trigger: TGTCAGTGTAGCCACCAGCCATCCAAAGTAGAAATC...CTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAAAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp AGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATCGATTATCTTTTCTTTCTGGAGTCGCTaGACTTCTAGCAGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: RVQQQPESLCEIYVSIIFSFWSR*TSSRLF
Trigger: GAAAAGCCTGCTAGAAGTCCAGCGACTCCAGAAAGA...AAAGATAATCGATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CCA 90 bp CTTCAGAGAAAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTTTGAAGCTTGCACTTTaGTCTAGAATAAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: LQRKIPDDGTGQVIKSSLLKLAL*SRINGP
Trigger: AGGACCATTTATTCTAGACCAAAGTGCAAGCTTCAA...AAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTTTCTCTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp CATATAAAAGTATTCTCAGTGGTTTCTGTAAATCACATTTCACTTTGCCTGTGGCATGATCTCCAGATCTaGGCTATCCTTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: HIKVFSVVSVNHISLCLWHDLQI*AILAVL
Trigger: GAGGACAGCAAGGATAGCCCAGATCTGGAGATCATG...CCACAGGCAAAGTGAAATGTGATTTACAGAAACCACTGAGAATACTTTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp AGCTTAAATCACCTGAAATTCTTGTACTTCAGAGAAAAATCCCAGATGACGGCATTCCCTACTCCCACTTaGGTTCCTTTGTGGTATGAA +
Preference number: 4 (lower is better)
Translates to: SLNHLKFLYFREKSQMTAFPTPT*VPLWYE
Trigger: TTCATACCACAAAGGAACCCAAGTGGGAGTAGGGAA...TGCCGTCATCTGGGATTTTTCTCTGAAGTACAAGAATTTCAGGTGATTTAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp CATATAAAAGTATTCTCAGTGGTTTCTGTAAATCACATTTCACTTTGCCTGTGGGGATATGACGGAAAATaGAACAGAACTGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: HIKVFSVVSVNHISLCLWGYDGK*NRTAQV
Trigger: GACCTGGGCAGTTCTGTTTCATTTTCCGTCATATCC...CCACAGGCAAAGTGAAATGTGATTTACAGAAACCACTGAGAATACTTTTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR TCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAACTGGCCTGGATGAGATaGGTAAAGGTATACTTTGGC +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEELAWMR*VKVYFG
Trigger: GCCAAAGTATACCTTTACTCATCTCATCCAGGCCAG...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAACAGCCTCATGAGATATaGTCCGAAGGTACTGCTCAA +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEQPHEI*SEGTAQ
Trigger: TTGAGCAGTACCTTCGGATCATATCTCATGAGGCTG...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp CAATGCCAGCAAGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATCTAGGAATGGAACGTTaGAGAAATGTGTGTCTATTA +
Preference number: 4 (lower is better)
Translates to: QCQQGFNSNLNPCVKYTYLGMER*RNVCLL
Trigger: TAATAGACACACATTTCTTCAACGTTCCATTCCTAG...ATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCTTGCTGGCATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp CATATAAAAGTATTCTCAGTGGTTTCTGTAAATCACATTTCACTTTGCCTGTGGTTGTCTGCTGCACTCTaGTTTTACTGTGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: HIKVFSVVSVNHISLCLWLSAAL*FYCEVG
Trigger: GCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAA...CCACAGGCAAAGTGAAATGTGATTTACAGAAACCACTGAGAATACTTTTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAATTCAAAATCAACAGCTaGAACCTCCTGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEFKINS*NLLCRL
Trigger: CAGCCTGCACAGGAGGTTGCAGCTGTTGATTTTGAA...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp CAATGCCAGCAAGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATCATTTCCAGAACCATTaGCATGACAAAAGAAAATGC +
Preference number: 4 (lower is better)
Translates to: QCQQGFNSNLNPCVKYTYHFQNH*HDKRKC
Trigger: GCATTTTCTTTTGTCATGGCAATGGTTCTGGAAATG...ATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCTTGCTGGCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAATCTTTCTGGAGTCGCTaGACTTCTAGCAGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEESFWSR*TSSRLF
Trigger: GAAAAGCCTGCTAGAAGTCCAGCGACTCCAGAAAGA...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp TTGGAGTCTATACATTTCTTCAGCTTTGAGCTCATTCAGTTCCTTTGTTCTTCTACTGAGCCAGAGGAATaGACATGGTATTTCAATAGG +
Preference number: 4 (lower is better)
Translates to: LESIHFFSFELIQFLCSSTEPEE*TWYFNR
Trigger: CCTATTGAAATACCATGTTCATTCCTCTGGCTCAGT...AGAAGAACAAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTATAGACTCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR GCA 90 bp GTTTTCTTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTTTCATCCAGGGAATTaGCATTACAGGGCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: VFFLHPKSRISICDFIISFHPGN*HYRAFL
Trigger: TAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAA...AGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR GCA 90 bp AGCTTAAATCACCTGAAATTCTTGTACTTCAGAGAAAAATCCCAGATGACGGCAATAATCAAGTTGTGTTaGCTGGGCACTGATAAGTGT +
Preference number: 4 (lower is better)
Translates to: SLNHLKFLYFREKSQMTAIIKLC*LGTDKC
Trigger: ACACTTATCAGTGCCCAGGCAACACAACTTGATTAT...TGCCGTCATCTGGGATTTTTCTCTGAAGTACAAGAATTTCAGGTGATTTAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR GCA 90 bp CATATAAAAGTATTCTCAGTGGTTTCTGTAAATCACATTTCACTTTGCCTGTGGCTGTTTGGAATAAACTaGAGCAGAGGAGAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: HIKVFSVVSVNHISLCLWLFGIN*SRGEVW
Trigger: CCAAACCTCTCCTCTGCTGCAGTTTATTCCAAACAG...CCACAGGCAAAGTGAAATGTGATTTACAGAAACCACTGAGAATACTTTTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAAGATTTCTACTTTGGATaGCTGGTGGCTACACTGACA +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEDFYFG*LVATLT
Trigger: TGTCAGTGTAGCCACCAGCCATCCAAAGTAGAAATC...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAAATCTACCAGCTCTTCTaGAAAGCTTTCAGCTATCAG +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEIYQLF*KAFSYQ
Trigger: CTGATAGCTGAAAGCTTTTCAGAAGAGCTGGTAGAT...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR GCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAAGGTGAACACAGCTTCTaGATAATCTTCGCACATATC +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEGEHSF*IIFAHI
Trigger: GATATGTGCGAAGATTATGCAGAAGCTGTGTTCACC...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR TCA 90 bp AGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATCGATTATCTTTCTTAGACATTGCCCATaGCTTCTTAGTGTGTTTAAT +
Preference number: 4 (lower is better)
Translates to: RVQQQPESLCEIYVSIIFLRHCP*LLSVFN
Trigger: ATTAAACACACTAAGAAGTCATGGGCAATGTCTAAG...AAAGATAATCGATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR TCA 90 bp GTTTTCTTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTCTTAGACATTGCCCATaGCTTCTTAGTGTGTTTAAT +
Preference number: 4 (lower is better)
Translates to: VFFLHPKSRISICDFIISLRHCP*LLSVFN
Trigger: ATTAAACACACTAAGAAGTCATGGGCAATGTCTAAG...AGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAATTCCTTTCCACCCTGTaGTCGGGTATTTTATACTTA +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEFLSTL*SGILYL
Trigger: TAAGTATAAAATACCCGACCACAGGGTGGAAAGGAA...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAAGCTGACGAATGTTGTTaGATTCAAAATCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEADECC*IQNQQL
Trigger: CAGCTGTTGATTTTGAATCCAACAACATTCGTCAGC...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CCA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAATTGAAGCTTGCACTTTaGTCTAGAATAAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEELKLAL*SRINGP
Trigger: AGGACCATTTATTCTAGACCAAAGTGCAAGCTTCAA...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS CCA 90 bp CTATTAAACTGCAGCTGGTTCTGGCCTAGGGTGAGGCGCGGCTACTaGGAGGCGGGCAACGGGGGCCCCCAACAAGGCCGCGCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: LLNCSWFWPRVRRGY*EAGNGGPQQGRASG
Trigger: GCCGGAAGCGCGGCCTTGTTGGGGGCCCCCGTTGCCCGCCTCCCAGTAGCCGCGCCTCACCCTAGGCCAGAACCAGCTGCAGTTTAATAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572370.5
CDS-3UTR CAA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCAGCTTTGCGGAGTCCTaGCTGTCTTGCTGGCGCCAG +
Preference number: 5 (lower is better)
Translates to: GWCHPFSSVTQMASPQRASFAES*LSCWRQ
Trigger: CTGGCGCCAGCAAGACAGCAAGGACTCCGCAAAGCT...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp ACAGCTGCAACCTCCTGTGCAGGCTGGGCTTTCGCTGTGTTTACTGACGAGCCAAGCTTTGCGGAGTCCTaGCTGTCTTGCTGGCGCCAG +
Preference number: 5 (lower is better)
Translates to: TAATSCAGWAFAVFTDEPSFAES*LSCWRQ
Trigger: CTGGCGCCAGCAAGACAGCAAGGACTCCGCAAAGCT...TGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CAA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGGGCAGAGCGAGCAGCTaGCTCCTGTCTCCTGATACG +
Preference number: 5 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASGRASS*LLSPDT
Trigger: CGTATCAGGAGACAGGAGCAAGCTGCTCGCTCTGCC...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000572370.5
CDS-3UTR CAA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCAGCTTTGCGGAGTCCTaGCTGTCTTGCTGGCGCCAG +
Preference number: 5 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLASFAES*LSCWRQ
Trigger: CTGGCGCCAGCAAGACAGCAAGGACTCCGCAAAGCT...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp GGCCCCGTGATGGGACCAGCTAGTAGCCGCACTTGTGTTGGTATCAATGCCAGCACTGCCTCCTCTACCTaGTCTGCTAAGTGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: GPVMGPASSRTCVGINASTASST*SAKWVA
Trigger: TGCCACCCACTTAGCAGACAAGGTAGAGGAGGCAGT...GCTGGCATTGATACCAACACAAGTGCGGCTACTAGCTGGTCCCATCACGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CAA 90 bp ACAGCTGCAACCTCCTGTGCAGGCTGGGCTTTCGCTGTGTTTACTGACGAGCCAGCTATCAGCCACGGGTaGAAGGAGCCTACAGCCTCA +
Preference number: 5 (lower is better)
Translates to: TAATSCAGWAFAVFTDEPAISHG*KEPTAS
Trigger: TGAGGCTGTAGGCTCCTTCAACCCGTGGCTGATAGC...TGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCGGGTCTGCATCCAGCTaGACAGAACAAAGTGAAAGC +
Preference number: 5 (lower is better)
Translates to: GWCHPFSSVTQMASPQRAGSASS*TEQSES
Trigger: GCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCC...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp AGCCAGACTGTGCTCTCCCTGAGTCTACAGCCTAGTAGGGCCAGAGGTCCTGACCCTTTGGTGATGTACTaGGCCATCTCTCCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: SQTVLSLSLQPSRARGPDPLVMY*AISPRP
Trigger: AGGCCTTGGAGAGATGGCCAAGTACATCACCAAAGG...GTCAGGACCTCTGGCCCTACTAGGCTGTAGACTCAGGGAGAGCACAGTCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CAA 90 bp GCTGCAACCTCCTGTGCAGGCTGGGCTTTCGCTGTGTTTACTGACGAGCCATCTGCCTCCTCTCACCCTTaGGTGATGTACTTGGCCATC +
Preference number: 5 (lower is better)
Translates to: AATSCAGWAFAVFTDEPSASSHP*VMYLAI
Trigger: GATGGCCAAGTACATCACCAAAGGGTGAGAGGAGGC...AGATGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS CCA 90 bp CCCGGCAAGAAGCTGCTTTGCTACAGAAGGTCGACTTGTTTCCTGTaGGAATGTGTCCTTTGCTGTGAGGGGCCTCCTCTCACCCTTTGG +
Preference number: 5 (lower is better)
Translates to: PGKKLLCYRRSTCFL*ECVLCCEGPPLTLW
Trigger: CCAAAGGGTGAGAGGAGGCCCCTCACAGCAAAGGACACATTCCCACAGGAAACAAGTCGACCTTCTGTAGCAAAGCAGCTTCTTGCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542826.6
CDS-3UTR CAA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCACACTTCTGAGAGCTTaGAGGCTGACTTCTGAGATG +
Preference number: 5 (lower is better)
Translates to: GWCHPFSSVTQMASPQRATLLRA*RLTSEM
Trigger: CATCTCAGAAGTCAGCCTCAAAGCTCTCAGAAGTGT...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCGCCTCCTCTCACCCTTaGGTGATGTACTTGGCCATC +
Preference number: 5 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLAASSHP*VMYLAI
Trigger: GATGGCCAAGTACATCACCAAAGGGTGAGAGGAGGC...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCCTCTCACCCTTaGGTGATGTACTTGGCCATC +
Preference number: 5 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLASSHP*VMYLAI
Trigger: GATGGCCAAGTACATCACCAAAGGGTGAGAGGAGGC...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCGCTAACACCTCGTCTTaGAAGCTTGCACTTTGGTCT +
Preference number: 5 (lower is better)
Translates to: GWCHPFSSVTQMASPQRAANTSS*KLALWS
Trigger: AGACCAAAGTGCAAGCTTCAAAGACGAGGTGTTAGC...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCGGAGTCCTTGCTGTCTaGCTGGCGCCAGAGTATCTT +
Preference number: 5 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLAGVLAV*LAPEYL
Trigger: AAGATACTCTGGCGCCAGCAAGACAGCAAGGACTCC...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGGAGTCCTTGCTGTCTaGCTGGCGCCAGAGTATCTT +
Preference number: 5 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLGVLAV*LAPEYL
Trigger: AAGATACTCTGGCGCCAGCAAGACAGCAAGGACTCC...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGGTATCCATGGTGCCTaGCGGTCTTTCACAGGCTGC +
Preference number: 5 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASGIHGA*RSFTGC
Trigger: GCAGCCTGTGAAAGACCGCAAGGCACCATGGATACC...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCACTGCCTCCTCTACCTaGTCTGCTAAGTGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLTASST*SAKWVA
Trigger: TGCCACCCACTTAGCAGACAAGGTAGAGGAGGCAGT...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp GGCCCCGTGATGGGACCAGCTAGTAGCCGCACTTGTGTTGGTATCAATGCCAGCGCTTCTGTAGTAGAATaGACTCTCTGGGCCTTGACC +
Preference number: 5 (lower is better)
Translates to: GPVMGPASSRTCVGINASASVVE*TLWALT
Trigger: GGTCAAGGCCCAGAGAGTCAATTCTACTACAGAAGC...GCTGGCATTGATACCAACACAAGTGCGGCTACTAGCTGGTCCCATCACGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CAA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGAGATCTGGGCTATCCTaGCTGTCCTCAACGGTGGCT +
Preference number: 5 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASRSGLS*LSSTVA
Trigger: AGCCACCGTTGAGGACAGCAAGGATAGCCCAGATCT...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCCTTTCATCCAGGGAATaGCCATTACAGGGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: GWCHPFSSVTQMASPQRALSSRE*PLQGLS
Trigger: AGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAG...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp GAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGGTGGGCTATCAGCCACGGGTaGAAGGAGCCTACAGCCTCA +
Preference number: 5 (lower is better)
Translates to: EASNDPELPPLPCLLSGWAISHG*KEPTAS
Trigger: TGAGGCTGTAGGCTCCTTCAACCCGTGGCTGATAGC...CCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS TCA 90 bp ACTTTGGGGTCGCTCCTCCCATCAAGTTGGGTCCTAGGTGCTAGATaGACACAGGTTGAAGCTGGCTGGCCTGGTCCCATAATGTCAGGT +
Preference number: 5 (lower is better)
Translates to: TLGSLLPSSWVLGAR*TQVEAGWPGPIMSG
Trigger: ACCTGACATTATGGGACCAGGCCAGCCAGCTTCAACCTGTGTTCATCTAGCACCTAGGACCCAACTTGATGGGAGGAGCGACCCCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000570455.1
ENST00000570790.5
ENST00000571642.5
CDS-3UTR CAA 90 bp GTTTGGGGGTATCCATGGTGCCTTGCGGTCTTTCACAGGCTGCCGGTTCATTTTCTAGATGAACACAGGTaGAAGCTGGCTGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: VWGYPWCLAVFHRLPVHFLDEHR*KLAGLV
Trigger: GACCAGGCCAGCCAGCTTCAACCTGTGTTCATCTAG...AAAATGAACCGGCAGCCTGTGAAAGACCGCAAGGCACCATGGATACCCCCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CAA 90 bp ATTCGGCGCATCATGATCTCCAGATCTGGGCTATCCTTGCTGTCCTCAACGGTGGCCTCCTCTCACCCTTaGGTGATGTACTTGGCCATC +
Preference number: 5 (lower is better)
Translates to: IRRIMISRSGLSLLSSTVASSHP*VMYLAI
Trigger: GATGGCCAAGTACATCACCAAAGGGTGAGAGGAGGC...CACCGTTGAGGACAGCAAGGATAGCCCAGATCTGGAGATCATGATGCGCCGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp AGCCAGACTGTGCTCTCCCTGAGTCTACAGCCTAGTAGGGCCAGAGGTCCTGACCTACAGAAGGTCGACTaGTTTCCTGTGGGAATGTGT +
Preference number: 5 (lower is better)
Translates to: SQTVLSLSLQPSRARGPDLQKVD*FPVGMC
Trigger: ACACATTCCCACAGGAAACAAGTCGACCTTCTGTAG...GTCAGGACCTCTGGCCCTACTAGGCTGTAGACTCAGGGAGAGCACAGTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CAA 90 bp TCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCTTTATGTAGCAGGTATCCATGGTGCCTaGCGGTCTTTCACAGGCTGC +
Preference number: 5 (lower is better)
Translates to: SLLQCDTNGLASESLYVAGIHGA*RSFTGC
Trigger: GCAGCCTGTGAAAGACCGCAAGGCACCATGGATACC...TGCTACATAAAGGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp GTTTGGGGGTATCCATGGTGCCTTGCGGTCTTTCACAGGCTGCCGGTTCATTTTAGATCTGGGCTATCCTaGCTGTCCTCAACGGTGGCT +
Preference number: 5 (lower is better)
Translates to: VWGYPWCLAVFHRLPVHFRSGLS*LSSTVA
Trigger: AGCCACCGTTGAGGACAGCAAGGATAGCCCAGATCT...AAAATGAACCGGCAGCCTGTGAAAGACCGCAAGGCACCATGGATACCCCCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCATTGCCATAATCAAGTaGTGTTGCCTGGGCACTGAT +
Preference number: 5 (lower is better)
Translates to: GWCHPFSSVTQMASPQRAIAIIK*CCLGTD
Trigger: ATCAGTGCCCAGGCAACACAACTTGATTATGGCAAT...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp ACACTTCTGACCTCATCGGAGACACAGCGAGGTCTGTACCTTCACCCAGGCACAGTAGCCGCACTTGTGTaGGTATCAATGCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: TLLTSSETQRGLYLHPGTVAALV*VSMPAR
Trigger: CCTTGCTGGCATTGATACCAACACAAGTGCGGCTAC...TGTGCCTGGGTGAAGGTACAGACCTCGCTGTGTCTCCGATGAGGTCAGAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp GGCCCCGTGATGGGACCAGCTAGTAGCCGCACTTGTGTTGGTATCAATGCCAGCAATGTGTGTCTATTATaGTGCACTGACAGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: GPVMGPASSRTCVGINASNVCLL*CTDSQG
Trigger: CCCCTGGCTGTCAGTGCACAATAATAGACACACATT...GCTGGCATTGATACCAACACAAGTGCGGCTACTAGCTGGTCCCATCACGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp ACAGCTGCAACCTCCTGTGCAGGCTGGGCTTTCGCTGTGTTTACTGACGAGCCAACAATAGTGACAGCCTaGTCATCCGGCAACAGTCTT +
Preference number: 5 (lower is better)
Translates to: TAATSCAGWAFAVFTDEPTIVTA*SSGNSL
Trigger: AAGACTGTTGCCGGATGACAAGGCTGTCACTATTGT...TGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CAA 90 bp GGCCCCGTGATGGGACCAGCTAGTAGCCGCACTTGTGTTGGTATCAATGCCAGCTATCGGATCGCCAAGTaGCTTGAATGTGTAGGAACA +
Preference number: 5 (lower is better)
Translates to: GPVMGPASSRTCVGINASYRIAK*LECVGT
Trigger: TGTTCCTACACATTCAAGCAACTTGGCGATCCGATA...GCTGGCATTGATACCAACACAAGTGCGGCTACTAGCTGGTCCCATCACGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CAA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCTGTTCACTTATGTTTTaGTGGTCACCTATCCTGGGA +
Preference number: 5 (lower is better)
Translates to: GWCHPFSSVTQMASPQRACSLMF*WSPILG
Trigger: TCCCAGGATAGGTGACCACAAAAACATAAGTGAACA...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCGGGTCTGCATCCAGCTaGACAGAACAAAGTGAAAGC +
Preference number: 5 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLAGSASS*TEQSES
Trigger: GCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCC...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp ACAGCTGCAACCTCCTGTGCAGGCTGGGCTTTCGCTGTGTTTACTGACGAGCCACTACAGAAGGTCGACTaGTTTCCTGTGGGAATGTGT +
Preference number: 5 (lower is better)
Translates to: TAATSCAGWAFAVFTDEPLQKVD*FPVGMC
Trigger: ACACATTCCCACAGGAAACAAGTCGACCTTCTGTAG...TGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCCCTGCTTTTGTTTTaGCCACGGCTAACACCTCGT +
Preference number: 5 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLASLLLF*PRLTPR
Trigger: ACGAGGTGTTAGCCGTGGCAAAAACAAAAGCAGGGA...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp CTTCGCACATATCCTGAAGTTCAGCAGCCACAGCACCCAGAGCTTCATCTACCAGGAGTCCTTGCTGTCTaGCTGGCGCCAGAGTATCTT +
Preference number: 5 (lower is better)
Translates to: LRTYPEVQQPQHPELHLPGVLAV*LAPEYL
Trigger: AAGATACTCTGGCGCCAGCAAGACAGCAAGGACTCC...TGGTAGATGAAGCTCTGGGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CAA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCCTACCTCTTTCAGCTTaGCGGAGTCCTTGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLLPLSA*RSPCCL
Trigger: AAGACAGCAAGGACTCCGCAAAGCTGAAAGAGGTAG...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp GCTCCTCGATGGGCAGCCGCCAGCTTAGACATTGCCCATGACTTCTTAGTGTGTCAGGTGACTTTCCTCTaGAGGATCTTCTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: APRWAAASLDIAHDFLVCQVTFL*RIFLLE
Trigger: CTCCAGCAAGAAGATCCTCAAGAGGAAAGTCACCTG...ACACACTAAGAAGTCATGGGCAATGTCTAAGCTGGCGGCTGCCCATCGAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CAA 90 bp GAACAAAGTGAAAGCTGGCGAATAAGGCTGCCCAGTTCCTTACACCGAGCAGGAAGATCTGGGCTATCCTaGCTGTCCTCAACGGTGGCT +
Preference number: 5 (lower is better)
Translates to: EQSESWRIRLPSSLHRAGRSGLS*LSSTVA
Trigger: AGCCACCGTTGAGGACAGCAAGGATAGCCCAGATCT...TCCTGCTCGGTGTAAGGAACTGGGCAGCCTTATTCGCCAGCTTTCACTTTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CAA 90 bp GCAGCCACAGCACCCAGAGCTTCATCTACCAGCTCTTCTGAAAAGCTTTCAGCTTTCACGGCTGGATCCTaGCGATCCACTGTCTTCGTG +
Preference number: 5 (lower is better)
Translates to: AATAPRASSTSSSEKLSAFTAGS*RSTVFV
Trigger: CACGAAGACAGTGGATCGCAAGGATCCAGCCGTGAA...AGCTGAAAGCTTTTCAGAAGAGCTGGTAGATGAAGCTCTGGGTGCTGTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTGCTATCAGCCACGGGTaGAAGGAGCCTACAGCCTCA +
Preference number: 5 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLAISHG*KEPTAS
Trigger: TGAGGCTGTAGGCTCCTTCAACCCGTGGCTGATAGC...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS TCA 90 bp GGACGTAGAGCATTCGGGCAGAGCGAGCAGCTTGCTCCTGTCTCCTaGTACGGATTCGACGTTCTTCATCTGGATCCAAAGCTTCTTCTA +
Preference number: 5 (lower is better)
Translates to: GRRAFGQSEQLAPVS*YGFDVLHLDPKLLL
Trigger: TAGAAGAAGCTTTGGATCCAGATGAAGAACGTCGAATCCGTATCAGGAGACAGGAGCAAGCTGCTCGCTCTGCCCGAATGCTCTACGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000572370.5
ENST00000576823.1
CDS-3UTR CAA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGACAATAGTGACAGCCTaGTCATCCGGCAACAGTCTT +
Preference number: 5 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASTIVTA*SSGNSL
Trigger: AAGACTGTTGCCGGATGACAAGGCTGTCACTATTGT...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CAA 90 bp GCTCCTCGATGGGCAGCCGCCAGCTTAGACATTGCCCATGACTTCTTAGTGTGTACACTTCTGAGAGCTTaGAGGCTGACTTCTGAGATG +
Preference number: 5 (lower is better)
Translates to: APRWAAASLDIAHDFLVCTLLRA*RLTSEM
Trigger: CATCTCAGAAGTCAGCCTCAAAGCTCTCAGAAGTGT...ACACACTAAGAAGTCATGGGCAATGTCTAAGCTGGCGGCTGCCCATCGAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CAA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCGTTACCTCTTCAATTTaGTGGATACAACTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: GWCHPFSSVTQMASPQRAVTSSI*WIQLLS
Trigger: ACTGAGCAGTTGTATCCACAAAATTGAAGAGGTAAC...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGGGCAGAGCGAGCAGCTaGCTCCTGTCTCCTGATACG +
Preference number: 5 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWGRASS*LLSPDT
Trigger: CGTATCAGGAGACAGGAGCAAGCTGCTCGCTCTGCC...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCTCTCCAAGGCCTTTaGGCTACCGATAGGAAATCT +
Preference number: 5 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLASLQGL*ATDRKS
Trigger: AGATTTCCTATCGGTAGCCAAAAGGCCTTGGAGAGA...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCTCTCTCCAAGGCCTTTaGGCTACCGATAGGAAATCT +
Preference number: 5 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLSLQGL*ATDRKS
Trigger: AGATTTCCTATCGGTAGCCAAAAGGCCTTGGAGAGA...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCACTACCTCTTTCAGCTTaGCGGAGTCCTTGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASLPLSA*RSPCCL
Trigger: AAGACAGCAAGGACTCCGCAAAGCTGAAAGAGGTAG...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp CTTTCTCTGGGGAGACACAGAGGTCTTCGCGCCATCCATCTGTTCCCTACTCCCATCTGGATGAAACTGTaGTCTGCTGCACTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LSLGRHRGLRAIHLFPTPIWMKL*SAALCF
Trigger: AAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGAT...GGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGTGTCTCCCCAGAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCTCTTGAGGATCTTCTaGCTGGAGAGGCTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASLLRIF*LERLFC
Trigger: ACAAAAGAGCCTCTCCAGCAAGAAGATCCTCAAGAG...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCACAGGTGACTTTCCTCTaGAGGATCTTCTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASQVTFL*RIFLLE
Trigger: CTCCAGCAAGAAGATCCTCAAGAGGAAAGTCACCTG...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp GGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCATCAAGCCTCTGTTTTaGCATGCTGTCAATTTCCTT +
Preference number: 5 (lower is better)
Translates to: GWCHPFSSVTQMASPQRAIKPLF*HAVNFL
Trigger: AAGGAAATTGACAGCATGCAAAAACAGAGGCTTGAT...GGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp AAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGACTGCCTCCTCTACCTaGTCTGCTAAGTGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: KRGFKRSRTASSTLSAKWTASST*SAKWVA
Trigger: TGCCACCCACTTAGCAGACAAGGTAGAGGAGGCAGT...CCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp GAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGGTGGGCTTCTGTAGTAGAATaGACTCTCTGGGCCTTGACC +
Preference number: 5 (lower is better)
Translates to: EASNDPELPPLPCLLSGWASVVE*TLWALT
Trigger: GGTCAAGGCCCAGAGAGTCAATTCTACTACAGAAGC...CCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAACACTTCTGAGAGCTTaGAGGCTGACTTCTGAGATG +
Preference number: 5 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASTLLRA*RLTSEM
Trigger: CATCTCAGAAGTCAGCCTCAAAGCTCTCAGAAGTGT...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp CTTCGCACATATCCTGAAGTTCAGCAGCCACAGCACCCAGAGCTTCATCTACCAGGGTCTGCATCCAGCTaGACAGAACAAAGTGAAAGC +
Preference number: 5 (lower is better)
Translates to: LRTYPEVQQPQHPELHLPGSASS*TEQSES
Trigger: GCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCC...TGGTAGATGAAGCTCTGGGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CAA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCCTTTGGTGATGTACTaGGCCATCTCTCCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLPLVMY*AISPRP
Trigger: AGGCCTTGGAGAGATGGCCAAGTACATCACCAAAGG...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCACTGTGAGGTTGGCTTaGTCTACCTCTTTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLTVRLA*STSFSF
Trigger: AAAGCTGAAAGAGGTAGACAAAGCCAACCTCACAGT...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp GAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTAAGTGGGTGGCTCTTGAGGATCTTCTaGCTGGAGAGGCTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: EASNDPELPPLPCLLSGWLLRIF*LERLFC
Trigger: ACAAAAGAGCCTCTCCAGCAAGAAGATCCTCAAGAG...CCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGCTTCTGTAGTAGAATaGACTCTCTGGGCCTTGACC +
Preference number: 5 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNASVVE*TLWALT
Trigger: GGTCAAGGCCCAGAGAGTCAATTCTACTACAGAAGC...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp CCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCATTGCCATAATCAAGTaGTGTTGCCTGGGCACTGAT +
Preference number: 5 (lower is better)
Translates to: PKQRVVPSLLQCDTNGLAIAIIK*CCLGTD
Trigger: ATCAGTGCCCAGGCAACACAACTTGATTATGGCAAT...GGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS CCA 90 bp ACTGGCCTGGATGAGATGAGTAAAGGTATACTTTGGCACCAGAGCTaGAGATTTCTACTTTGGATGGCTGGTGGCTACACTGACAGGCTG +
Preference number: 5 (lower is better)
Translates to: TGLDEMSKGILWHQS*RFLLWMAGGYTDRL
Trigger: CAGCCTGTCAGTGTAGCCACCAGCCATCCAAAGTAGAAATCTCCAGCTCTGGTGCCAAAGTATACCTTTACTCATCTCATCCAGGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
ENST00000576823.1
CDS CCA 90 bp CTAGCAGGCTTTTCTGTTCACTTATGTTTTTGTGGTCACCTATCCTaGGATGAGGCTGAAGTCCCGGATCATGGGTGGGTGGCGAATTTG +
Preference number: 5 (lower is better)
Translates to: LAGFSVHLCFCGHLS*DEAEVPDHGWVANL
Trigger: CAAATTCGCCACCCACCCATGATCCGGGACTTCAGCCTCATCCCAGGATAGGTGACCACAAAAACATAAGTGAACAGAAAAGCCTGCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572235.1
ENST00000572370.5
ENST00000576823.1
CDS-3UTR CAA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGTGTTCACTTATGTTTTaGTGGTCACCTATCCTGGGA +
Preference number: 5 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASCSLMF*WSPILG
Trigger: TCCCAGGATAGGTGACCACAAAAACATAAGTGAACA...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp TCATCCAGGGAATTGCCATTACAGGGCCTTTCTAACATGATGTTCACGGCTGGACCTTTGGTGATGTACTaGGCCATCTCTCCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: SSRELPLQGLSNMMFTAGPLVMY*AISPRP
Trigger: AGGCCTTGGAGAGATGGCCAAGTACATCACCAAAGG...TCCAGCCGTGAACATCATGTTAGAAAGGCCCTGTAATGGCAATTCCCTGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTACCTCTTTCAGCTTaGCGGAGTCCTTGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLLPLSA*RSPCCL
Trigger: AAGACAGCAAGGACTCCGCAAAGCTGAAAGAGGTAG...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp ACAGAGGTCTTCGCGCCATCCATCTGTTCCCTACTCCCACTTGGGTTCCTTTGTGCTTTTACTGTGAGGTaGGCTTTGTCTACCTCTTTC +
Preference number: 5 (lower is better)
Translates to: TEVFAPSICSLLPLGFLCAFTVR*ALSTSF
Trigger: GAAAGAGGTAGACAAAGCCAACCTCACAGTAAAAGC...ACAAAGGAACCCAAGTGGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp AAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGCTTTTACTGTGAGGTaGGCTTTGTCTACCTCTTTC +
Preference number: 5 (lower is better)
Translates to: KQRVVPSLLQCDTNGLASAFTVR*ALSTSF
Trigger: GAAAGAGGTAGACAAAGCCAACCTCACAGTAAAAGC...TGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp GGCCCCGTGATGGGACCAGCTAGTAGCCGCACTTGTGTTGGTATCAATGCCAGCATGCTGTCAATTTCCTaGGCTTTTAACTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: GPVMGPASSRTCVGINASMLSIS*AFNSSS
Trigger: ACTAGAAGAGTTAAAAGCCAAGGAAATTGACAGCAT...GCTGGCATTGATACCAACACAAGTGCGGCTACTAGCTGGTCCCATCACGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CAA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGAGATCTGGGCTATCCTaGCTGTCCTCAACGGTGGCT +
Preference number: 5 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWRSGLS*LSSTVA
Trigger: AGCCACCGTTGAGGACAGCAAGGATAGCCCAGATCT...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp TCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATCTTTCATCCAGGGAATaGCCATTACAGGGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: SCGPKQRVVPSLLQCDTNLSSRE*PLQGLS
Trigger: AGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAG...ATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp TCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCTTTATGTAGCACTTTCATCCAGGGAATaGCCATTACAGGGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: SLLQCDTNGLASESLYVALSSRE*PLQGLS
Trigger: AGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAG...TGCTACATAAAGGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp ACAGAGGTCTTCGCGCCATCCATCTGTTCCCTACTCCCACTTGGGTTCCTTTGTCCCACTTGGGTTCCTTaGTGGTATGAAATAGAGACA +
Preference number: 5 (lower is better)
Translates to: TEVFAPSICSLLPLGFLCPTWVP*WYEIET
Trigger: TGTCTCTATTTCATACCACAAAGGAACCCAAGTGGG...ACAAAGGAACCCAAGTGGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp ACAGAGGTCTTCGCGCCATCCATCTGTTCCCTACTCCCACTTGGGTTCCTTTGTATGATCTGTAAGATGTaGGAGGACCAGGCTATGATG +
Preference number: 5 (lower is better)
Translates to: TEVFAPSICSLLPLGFLCMICKM*EDQAMM
Trigger: CATCATAGCCTGGTCCTCCAACATCTTACAGATCAT...ACAAAGGAACCCAAGTGGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp GGAACAGAAGGGTCTGCATCCAGCTTGACAGAACAAAGTGAAAGCTGGCGAATAGGGTCTGCATCCAGCTaGACAGAACAAAGTGAAAGC +
Preference number: 5 (lower is better)
Translates to: GTEGSASSLTEQSESWRIGSASS*TEQSES
Trigger: GCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCC...TATTCGCCAGCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCCTTCTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
CDS-3UTR CAA 90 bp TCCCTTCTCCAGTGTGACACAAATGGCCTCGCCTCAGAGAGCCTTTATGTAGCAACTGTGAGGTTGGCTTaGTCTACCTCTTTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: SLLQCDTNGLASESLYVATVRLA*STSFSF
Trigger: AAAGCTGAAAGAGGTAGACAAAGCCAACCTCACAGT...TGCTACATAAAGGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp CTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCGCTTTTACTGTGAGGTaGGCTTTGTCTACCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LDQERLQTIQNCLLYLVCAFTVR*ALSTSF
Trigger: GAAAGAGGTAGACAAAGCCAACCTCACAGTAAAAGC...GCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp CAATGCCAGCAAGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATGGTATCCATGGTGCCTaGCGGTCTTTCACAGGCTGC +
Preference number: 5 (lower is better)
Translates to: QCQQGFNSNLNPCVKYTYGIHGA*RSFTGC
Trigger: GCAGCCTGTGAAAGACCGCAAGGCACCATGGATACC...ATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCTTGCTGGCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CAA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCATCAAGCCTCTGTTTTaGCATGCTGTCAATTTCCTT +
Preference number: 5 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLIKPLF*HAVNFL
Trigger: AAGGAAATTGACAGCATGCAAAAACAGAGGCTTGAT...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp GCTGCAACCTCCTGTGCAGGCTGGGCTTTCGCTGTGTTTACTGACGAGCCATCTTACATTTCTTCAGCTTaGAGCTCATTCAGTTCCTTT +
Preference number: 5 (lower is better)
Translates to: AATSCAGWAFAVFTDEPSYISSA*SSFSSF
Trigger: AAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTA...AGATGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGGAGGTTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGGGCAGAAACACTCAATaGTTGGAGTCTATACATTTC +
Preference number: 5 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASGRNTQ*LESIHF
Trigger: GAAATGTATAGACTCCAACAATTGAGTGTTTCTGCC...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp CTCTGGGCCTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCGGCAGAAACACTCAATaGTTGGAGTCTATACATTTC +
Preference number: 5 (lower is better)
Translates to: LWALTKRGFKRSRTASSTGRNTQ*LESIHF
Trigger: GAAATGTATAGACTCCAACAATTGAGTGTTTCTGCC...GGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp CTTTTCTCTGATCCTTCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTATTCACGGCTGGATCCTaGCGATCCACTGTCTTCGTG +
Preference number: 5 (lower is better)
Translates to: LFSDPSSVPTLSSRELPLFTAGS*RSTVFV
Trigger: CACGAAGACAGTGGATCGCAAGGATCCAGCCGTGAA...TAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAGGATCAGAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp TGGAACGTTGAAGAAATGTGTGTCTATTATTGTGCACTGACAGCCAGGGGGCTCGCCTCAGGCTACGAATaGAGAGAAAGTCTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: WNVEEMCVYYCALTARGLASGYE*RESLSR
Trigger: CCTGGAAAGACTTTCTCTCAATTCGTAGCCTGAGGC...GAGCCCCCTGGCTGTCAGTGCACAATAATAGACACACATTTCTTCAACGTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS TCA 90 bp TTTAATCTGGATGAAACTGTTGTCTGCTGCACTCTGCTTTTACTGTaGGGTTGGCTTTGTCTACCTCTTTCAGCTTTGCGGAGTCCCGGC +
Preference number: 5 (lower is better)
Translates to: FNLDETVVCCTLLLL*GWLCLPLSALRSPG
Trigger: GCCGGGACTCCGCAAAGCTGAAAGAGGTAGACAAAGCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542826.6
CDS-3UTR CAA 90 bp CTTGACCAAGAGAGGCTTCAAACGATCCAGAACTGCCTCCTCTACCTTGTCTGCTGTTCACTTATGTTTTaGTGGTCACCTATCCTGGGA +
Preference number: 5 (lower is better)
Translates to: LDQERLQTIQNCLLYLVCCSLMF*WSPILG
Trigger: TCCCAGGATAGGTGACCACAAAAACATAAGTGAACA...GCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CAA 90 bp GGAACAGAAGGGTCTGCATCCAGCTTGACAGAACAAAGTGAAAGCTGGCGAATATCTCTCCAAGGCCTTTaGGCTACCGATAGGAAATCT +
Preference number: 5 (lower is better)
Translates to: GTEGSASSLTEQSESWRISLQGL*ATDRKS
Trigger: AGATTTCCTATCGGTAGCCAAAAGGCCTTGGAGAGA...TATTCGCCAGCTTTCACTTTGTTCTGTCAAGCTGGATGCAGACCCTTCTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CAA 90 bp CTTCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTACAGGGCCTTTCTACTACAGAAGGTCGACTaGTTTCCTGTGGGAATGTGT +
Preference number: 5 (lower is better)
Translates to: LPLFPHFHPGNCHYRAFLLQKVD*FPVGMC
Trigger: ACACATTCCCACAGGAAACAAGTCGACCTTCTGTAG...TAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp TCACCCTTTGGTGATGTACTTGGCCATCTCTCCAAGGCCTTTTGGCTACCGATAACTGTGAGGTTGGCTTaGTCTACCTCTTTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: SPFGDVLGHLSKAFWLPITVRLA*STSFSF
Trigger: AAAGCTGAAAGAGGTAGACAAAGCCAACCTCACAGT...TATCGGTAGCCAAAAGGCCTTGGAGAGATGGCCAAGTACATCACCAAAGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CAA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGCAGGTGACTTTCCTCTaGAGGATCTTCTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWQVTFL*RIFLLE
Trigger: CTCCAGCAAGAAGATCCTCAAGAGGAAAGTCACCTG...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp GGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCGATGCTGTCAATTTCCTaGGCTTTTAACTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: GQNKGWCHPFSSVTQMASMLSIS*AFNSSS
Trigger: ACTAGAAGAGTTAAAAGCCAAGGAAATTGACAGCAT...CGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp GTTTGGGGGTATCCATGGTGCCTTGCGGTCTTTCACAGGCTGCCGGTTCATTTTATCAAGCCTCTGTTTTaGCATGCTGTCAATTTCCTT +
Preference number: 5 (lower is better)
Translates to: VWGYPWCLAVFHRLPVHFIKPLF*HAVNFL
Trigger: AAGGAAATTGACAGCATGCAAAAACAGAGGCTTGAT...AAAATGAACCGGCAGCCTGTGAAAGACCGCAAGGCACCATGGATACCCCCAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp GGGCCAAAACAAAGGGTGGTGCCATCCCTTCTCCAGTGTGACACAAATGGCCTCTACATTTCTTCAGCTTaGAGCTCATTCAGTTCCTTT +
Preference number: 5 (lower is better)
Translates to: GPKQRVVPSLLQCDTNGLYISSA*SSFSSF
Trigger: AAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTA...GAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTTTTGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp ACACCGAGCAGGAAGTGGATGCTCCCCTCGGTCAGTAAACTGAGTGACAAACATGTTACCTCTTCAATTTaGTGGATACAACTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: TPSRKWMLPSVSKLSDKHVTSSI*WIQLLS
Trigger: ACTGAGCAGTTGTATCCACAAAATTGAAGAGGTAAC...ATGTTTGTCACTCAGTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570790.5
ENST00000572235.1
CDS-3UTR CAA 90 bp CTTCAGAGAAAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTTCCCTGCTTTTGTTTTaGCCACGGCTAACACCTCGT +
Preference number: 5 (lower is better)
Translates to: LQRKIPDDGTGQVIKSSLSLLLF*PRLTPR
Trigger: ACGAGGTGTTAGCCGTGGCAAAAACAAAAGCAGGGA...AAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTTTCTCTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp CAAGCCTCTGTTTTTGCATGCTGTCAATTTCCTTGGCTTTTAACTCTTCTAGTTGGTATCCATGGTGCCTaGCGGTCTTTCACAGGCTGC +
Preference number: 5 (lower is better)
Translates to: QASVFACCQFPWLLTLLVGIHGA*RSFTGC
Trigger: GCAGCCTGTGAAAGACCGCAAGGCACCATGGATACC...AACTAGAAGAGTTAAAAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp AAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTATTCCCTGGCTCTTGAGGATCTTCTaGCTGGAGAGGCTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: KIPDDGTGQVIKSSLIPWLLRIF*LERLFC
Trigger: ACAAAAGAGCCTCTCCAGCAAGAAGATCCTCAAGAG...CCAGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp CTTCGCACATATCCTGAAGTTCAGCAGCCACAGCACCCAGAGCTTCATCTACCAGGCAGAAACACTCAATaGTTGGAGTCTATACATTTC +
Preference number: 5 (lower is better)
Translates to: LRTYPEVQQPQHPELHLPGRNTQ*LESIHF
Trigger: GAAATGTATAGACTCCAACAATTGAGTGTTTCTGCC...TGGTAGATGAAGCTCTGGGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTCAGCAACCTGAATCCTaGTGTGAAATATACGTATCG +
Preference number: 5 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLQQPES*CEIYVS
Trigger: CGATACGTATATTTCACACAAGGATTCAGGTTGCTG...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS GCA 90 bp AATCTCAAAGGTCTCCAGCAAGGCGTTATTCCCAAAACAGAGCTTTaGCATGGTAAACTAGCATGTTCCAGCAGGGTGGTTTTTGGACAA +
Preference number: 5 (lower is better)
Translates to: NLKGLQQGVIPKTEL*HGKLACSSRVVFGQ
Trigger: TTGTCCAAAAACCACCCTGCTGGAACATGCTAGTTTACCATGGCAAAGCTCTGTTTTGGGAATAACGCCTTGCTGGAGACCTTTGAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571642.5
CDS CCA 90 bp ATGAGTAAAGGTATACTTTGGCACCAGAGCTGGAGATTTCTACTTTaGATGGCTGGTGGCTACACTGACAGGCTGCTTGACTCTTTGATT +
Preference number: 5 (lower is better)
Translates to: MSKGILWHQSWRFLL*MAGGYTDRLLDSLI
Trigger: AATCAAAGAGTCAAGCAGCCTGTCAGTGTAGCCACCAGCCATCCAAAGTAGAAATCTCCAGCTCTGGTGCCAAAGTATACCTTTACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
ENST00000576823.1
CDS-3UTR CAA 90 bp AGCTTAAATCACCTGAAATTCTTGTACTTCAGAGAAAAATCCCAGATGACGGCACTAGATGAACACAGGTaGAAGCTGGCTGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: SLNHLKFLYFREKSQMTALDEHR*KLAGLV
Trigger: GACCAGGCCAGCCAGCTTCAACCTGTGTTCATCTAG...TGCCGTCATCTGGGATTTTTCTCTGAAGTACAAGAATTTCAGGTGATTTAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp TTCCAGTTCAAGATAGTGAATAGGCAGTGTTCACCTTCCATCCCTTCGTCCCCATGTTCACTTATGTTTTaGTGGTCACCTATCCTGGGA +
Preference number: 5 (lower is better)
Translates to: FQFKIVNRQCSPSIPSSPCSLMF*WSPILG
Trigger: TCCCAGGATAGGTGACCACAAAAACATAAGTGAACA...TGGGGACGAAGGGATGGAAGGTGAACACTGCCTATTCACTATCTTGAACTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572235.1
CDS-3UTR CAA 90 bp TTAATCTGGATGAAACTGTTGTCTGCTGCACTCTGCTTTTACTGTGAGGTTGGCCTCTTGAGGATCTTCTaGCTGGAGAGGCTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: LIWMKLLSAALCFYCEVGLLRIF*LERLFC
Trigger: ACAAAAGAGCCTCTCCAGCAAGAAGATCCTCAAGAG...GCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp TGCTACAGAAGGTCGACTTGTTTCCTGTGGGAATGTGTCCTTTGCTGTGAGGGGTACATTTCTTCAGCTTaGAGCTCATTCAGTTCCTTT +
Preference number: 5 (lower is better)
Translates to: CYRRSTCFLWECVLCCEGYISSA*SSFSSF
Trigger: AAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTA...CCCCTCACAGCAAAGGACACATTCCCACAGGAAACAAGTCGACCTTCTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CAA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTGGCAGAAACACTCAATaGTTGGAGTCTATACATTTC +
Preference number: 5 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLGRNTQ*LESIHF
Trigger: GAAATGTATAGACTCCAACAATTGAGTGTTTCTGCC...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp CCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTTGACGAACAGACTCCTACCTCTTTCAGCTTaGCGGAGTCCCGGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: PKSRISICDFIISLTNRLLPLSA*RSPGKK
Trigger: CTTCTTGCCGGGACTCCGCAAAGCTGAAAGAGGTAG...GAGTCTGTTCGTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542826.6
CDS TCA 90 bp AATTCTAATGGCATGTGGGCAAGAATATCGGATCGCCAAGTTGCTTaGATGTGTAGGAACATTCCTATTAAACTGCAGCTGGTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: NSNGMWARISDRQVA*MCRNIPIKLQLVLA
Trigger: GGCCAGAACCAGCTGCAGTTTAATAGGAATGTTCCTACACATTCAAGCAACTTGGCGATCCGATATTCTTGCCCACATGCCATTAGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572370.5
CDS-3UTR CAA 90 bp CTTCAGAGAAAAATCCCAGATGACGGCACTGGACAGGTTATAAAGAGTTCCCTTACTGTGAGGTTGGCTTaGTCTACCTCTTTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: LQRKIPDDGTGQVIKSSLTVRLA*STSFSF
Trigger: AAAGCTGAAAGAGGTAGACAAAGCCAACCTCACAGT...AAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTTTCTCTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp TCTTTCACAGGCTGCCGGTTCATTTTTAATCTGGATGAAACTGTTGTCTGCTGCATCTGGATGAAACTGTaGTCTGCTGCACTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: SFTGCRFIFNLDETVVCCIWMKL*SAALCF
Trigger: AAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGAT...GCAGCAGACAACAGTTTCATCCAGATTAAAAATGAACCGGCAGCCTGTGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp CAGCTGAGGATGAAAATTTCCTGTGGGCCAAAACAAAGGGTGGTGCCATCCCTTTACATTTCTTCAGCTTaGAGCTCATTCAGTTCCTTT +
Preference number: 5 (lower is better)
Translates to: QLRMKISCGPKQRVVPSLYISSA*SSFSSF
Trigger: AAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTA...AAGGGATGGCACCACCCTTTGTTTTGGCCCACAGGAAATTTTCATCCTCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000542826.6
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp TTTTGGTCATTGTTTTCTTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTGCTTCTGTAGTAGAATaGACTCTCTGGGCCTTGACC +
Preference number: 5 (lower is better)
Translates to: FWSLFSSCIQSRGSAYAIASVVE*TLWALT
Trigger: GGTCAAGGCCCAGAGAGTCAATTCTACTACAGAAGC...AATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAACAATGACCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp AGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATCGATTATCTTTTTCACGGCTGGATCCTaGCGATCCACTGTCTTCGTG +
Preference number: 5 (lower is better)
Translates to: RVQQQPESLCEIYVSIIFFTAGS*RSTVFV
Trigger: CACGAAGACAGTGGATCGCAAGGATCCAGCCGTGAA...AAAGATAATCGATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CAA 90 bp CTTTTCTCTGATCCTTCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTAATTGCCATAATCAAGTaGTGTTGCCTGGGCACTGAT +
Preference number: 5 (lower is better)
Translates to: LFSDPSSVPTLSSRELPLIAIIK*CCLGTD
Trigger: ATCAGTGCCCAGGCAACACAACTTGATTATGGCAAT...TAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAGGATCAGAGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS TCA 90 bp AATTCTAATGGCATGTGGGCAAGAATATCGGATCGCCAAGTTGCTTaGATGTGTAGGAACATTCCTATTAAACTGCAGCTGGTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: NSNGMWARISDRQVA*MCRNIPIKLQLVLG
Trigger: ACCCAGAACCAGCTGCAGTTTAATAGGAATGTTCCTACACATTCAAGCAACTTGGCGATCCGATATTCTTGCCCACATGCCATTAGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000571642.5
CDS-3UTR CAA 90 bp CATATAAAAGTATTCTCAGTGGTTTCTGTAAATCACATTTCACTTTGCCTGTGGACTGCCTCCTCTACCTaGTCTGCTAAGTGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: HIKVFSVVSVNHISLCLWTASST*SAKWVA
Trigger: TGCCACCCACTTAGCAGACAAGGTAGAGGAGGCAGT...CCACAGGCAAAGTGAAATGTGATTTACAGAAACCACTGAGAATACTTTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAATTCACGGCTGGATCCTaGCGATCCACTGTCTTCGTG +
Preference number: 5 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEFTAGS*RSTVFV
Trigger: CACGAAGACAGTGGATCGCAAGGATCCAGCCGTGAA...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp CAAATGAATATTTGCTTCTGTAGTAGAATTGACTCTCTGGGCCTTGACCAAGAGCTTTCATCCAGGGAATaGCCATTACAGGGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: QMNICFCSRIDSLGLDQELSSRE*PLQGLS
Trigger: AGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAG...CTCTTGGTCAAGGCCCAGAGAGTCAATTCTACTACAGAAGCAAATATTCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp GAATGGAACGTTGAAGAAATGTGTGTCTATTATTGTGCACTGACAGCCAGGGGGCCTAGGAATGGAACGTaGAAGAAATGTGTGTCTATT +
Preference number: 5 (lower is better)
Translates to: EWNVEEMCVYYCALTARGPRNGT*KKCVSI
Trigger: AATAGACACACATTTCTTCAACGTTCCATTCCTAGG...CCCCCTGGCTGTCAGTGCACAATAATAGACACACATTTCTTCAACGTTCCATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp ACATGCCACGCTGAAGAGTTTAGCTTTCATCCTCTAAGTTACAGAGAGCCACTAGTTACCTCTTCAATTTaGTGGATACAACTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: TCHAEEFSFHPLSYREPLVTSSI*WIQLLS
Trigger: ACTGAGCAGTTGTATCCACAAAATTGAAGAGGTAAC...TAGTGGCTCTCTGTAACTTAGAGGATGAAAGCTAAACTCTTCAGCGTGGCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572235.1
CDS-3UTR CAA 90 bp CCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTTGACGAACAGACTCGCTAACACCTCGTCTTaGAAGCTTGCACTTTGGTCT +
Preference number: 5 (lower is better)
Translates to: PKSRISICDFIISLTNRLANTSS*KLALWS
Trigger: AGACCAAAGTGCAAGCTTCAAAGACGAGGTGTTAGC...GAGTCTGTTCGTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CAA 90 bp TGTTGGAGTCTATACATTTCTTCAGCTTTGAGCTCATTCAGTTCCTTTGTTCTTTCCCTGCTTTTGTTTTaGCCACGGCTAACACCTCGT +
Preference number: 5 (lower is better)
Translates to: CWSLYISSALSSFSSFVLSLLLF*PRLTPR
Trigger: ACGAGGTGTTAGCCGTGGCAAAAACAAAAGCAGGGA...AAGAACAAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTATAGACTCCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570790.5
CDS-3UTR CAA 90 bp GAATGGAACGTTGAAGAAATGTGTGTCTATTATTGTGCACTGACAGCCAGGGGGATGCTGTCAATTTCCTaGGCTTTTAACTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: EWNVEEMCVYYCALTARGMLSIS*AFNSSS
Trigger: ACTAGAAGAGTTAAAAGCCAAGGAAATTGACAGCAT...CCCCCTGGCTGTCAGTGCACAATAATAGACACACATTTCTTCAACGTTCCATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp CTTTTCTCTGATCCTTCCTCTGTTCCCACACTTTCATCCAGGGAATTGCCATTAATCAAGCCTCTGTTTTaGCATGCTGTCAATTTCCTT +
Preference number: 5 (lower is better)
Translates to: LFSDPSSVPTLSSRELPLIKPLF*HAVNFL
Trigger: AAGGAAATTGACAGCATGCAAAAACAGAGGCTTGAT...TAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAGGATCAGAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp CAATGCCAGCAAGGGTTCAACAGCAACCTGAATCCTTGTGTGAAATATACGTATGTTACCTCTTCAATTTaGTGGATACAACTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: QCQQGFNSNLNPCVKYTYVTSSI*WIQLLS
Trigger: ACTGAGCAGTTGTATCCACAAAATTGAAGAGGTAAC...ATACGTATATTTCACACAAGGATTCAGGTTGCTGTTGAACCCTTGCTGGCATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361413.8
ENST00000570790.5
CDS-3UTR CAA 90 bp CCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTTTGACGAACAGACTCATCTGGATGAAACTGTaGTCTGCTGCACTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: PKSRISICDFIISLTNRLIWMKL*SAALCF
Trigger: AAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGAT...GAGTCTGTTCGTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS CCA 90 bp TTAGTTACCTCTTCAATTTTGTGGATACAACTGCTCAGTTCTTTCTaGAGTCGCTGGACTTCTAGCAGGCTTTTCTGTTCACTTATGTTT +
Preference number: 5 (lower is better)
Translates to: LVTSSILWIQLLSSF*SRWTSSRLFCSLMF
Trigger: AAACATAAGTGAACAGAAAAGCCTGCTAGAAGTCCAGCGACTCCAGAAAGAACTGAGCAGTTGTATCCACAAAATTGAAGAGGTAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572235.1
ENST00000572370.5
ENST00000576823.1
CDS-3UTR CAA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAACTACAGAAGGTCGACTaGTTTCCTGTGGGAATGTGT +
Preference number: 5 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEELQKVD*FPVGMC
Trigger: ACACATTCCCACAGGAAACAAGTCGACCTTCTGTAG...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp CATATAAAAGTATTCTCAGTGGTTTCTGTAAATCACATTTCACTTTGCCTGTGGGCTAACACCTCGTCTTaGAAGCTTGCACTTTGGTCT +
Preference number: 5 (lower is better)
Translates to: HIKVFSVVSVNHISLCLWANTSS*KLALWS
Trigger: AGACCAAAGTGCAAGCTTCAAAGACGAGGTGTTAGC...CCACAGGCAAAGTGAAATGTGATTTACAGAAACCACTGAGAATACTTTTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp GTTTTCTTCCTGCATCCAAAGTCGAGGATCAGCATATGCGATTTTATTATATCTGCTTTTACTGTGAGGTaGGCTTTGTCTACCTCTTTC +
Preference number: 5 (lower is better)
Translates to: VFFLHPKSRISICDFIISAFTVR*ALSTSF
Trigger: GAAAGAGGTAGACAAAGCCAACCTCACAGTAAAAGC...AGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS-3UTR CAA 90 bp AGCTTAAATCACCTGAAATTCTTGTACTTCAGAGAAAAATCCCAGATGACGGCACAGCAACCTGAATCCTaGTGTGAAATATACGTATCG +
Preference number: 5 (lower is better)
Translates to: SLNHLKFLYFREKSQMTAQQPES*CEIYVS
Trigger: CGATACGTATATTTCACACAAGGATTCAGGTTGCTG...TGCCGTCATCTGGGATTTTTCTCTGAAGTACAAGAATTTCAGGTGATTTAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS-3UTR CAA 90 bp ATACGTATCGATTATCTTTCAAAACATTTTCATCACCAAACTGAGCCAGAGGAAATCTGGATGAAACTGTaGTCTGCTGCACTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: IRIDYLSKHFHHQTEPEEIWMKL*SAALCF
Trigger: AAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGAT...TTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS-3UTR CAA 90 bp TCATTTTTAATCTGGATGAAACTGTTGTCTGCTGCACTCTGCTTTTACTGTGAGATGCTGTCAATTTCCTaGGCTTTTAACTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: SFLIWMKLLSAALCFYCEMLSIS*AFNSSS
Trigger: ACTAGAAGAGTTAAAAGCCAAGGAAATTGACAGCAT...CTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAAAAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000542826.6
ENST00000570790.5
CDS GCA 90 bp ACTCTACAATCTGCATCTTTACAATGGTATGATTCATTGTATGAGTaGTTCAGTTTTTCAATTCTAATGGCATGTGGGCAAGAATATCGG +
Preference number: 5 (lower is better)
Translates to: TLQSASLQWYDSLYE*FSFSILMACGQEYR
Trigger: CCGATATTCTTGCCCACATGCCATTAGAATTGAAAAACTGAAGCACTCATACAATGAATCATACCATTGTAAAGATGCAGATTGTAGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000571642.5
ENST00000572370.5
CDS CCA 72 bp TGCAGCTGGTTCTGGCCTAGGGTGAGGCGCGGCTACTaGGAGGCGGGCAACGGGGGCCCCCAACAAGGCCGC +
Preference number: 6 (lower is better)
Translates to: CSWFWPRVRRGY*EAGNGGPQQGR
Trigger: GCGGCCTTGTTGGGGGCCCCCGTTGCCCGCCTCCCAGTAGCCGCGCCTCACCCTAGGCCAGAACCAGCTGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572370.5
CDS CAA 72 bp CTGGAGGACGTAGAGCATTCGGGCAGAGCGAGCAGCTaGCTCCTGTCTCCTGATACGGATTCGACGTTCTTC +
Preference number: 6 (lower is better)
Translates to: LEDVEHSGRASS*LLSPDTDSTFF
Trigger: GAAGAACGTCGAATCCGTATCAGGAGACAGGAGCAAGCTGCTCGCTCTGCCCGAATGCTCTACGTCCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000572370.5
ENST00000576823.1
CDS CAA 90 bp TACCTGCTGCTGGAGGACGTAGAGCATTCGGGCAGAGCGAGCAGCTaGCTCCTGTCTCCTGATACGGATTCGACGTTCTTCATCTGGATC +
Preference number: 6 (lower is better)
Translates to: YLLLEDVEHSGRASS*LLSPDTDSTFFIWI
Trigger: GATCCAGATGAAGAACGTCGAATCCGTATCAGGAGACAGGAGCAAGCTGCTCGCTCTGCCCGAATGCTCTACGTCCTCCAGCAGCAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361413.8
CDS CAA 90 bp TCACTGCTGCTGGAGGACGTAGAGCATTCGGGCAGAGCGAGCAGCTaGCTCCTGTCTCCTGATACGGATTCGACGTTCTTCATCTGGATC +
Preference number: 6 (lower is better)
Translates to: SLLLEDVEHSGRASS*LLSPDTDSTFFIWI
Trigger: GATCCAGATGAAGAACGTCGAATCCGTATCAGGAGACAGGAGCAAGCTGCTCGCTCTGCCCGAATGCTCTACGTCCTCCAGCAGCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572370.5
CDS CAA 90 bp GAACTGCTGCTGGAGGACGTAGAGCATTCGGGCAGAGCGAGCAGCTaGCTCCTGTCTCCTGATACGGATTCGACGTTCTTCATCTGGATC +
Preference number: 6 (lower is better)
Translates to: ELLLEDVEHSGRASS*LLSPDTDSTFFIWI
Trigger: GATCCAGATGAAGAACGTCGAATCCGTATCAGGAGACAGGAGCAAGCTGCTCGCTCTGCCCGAATGCTCTACGTCCTCCAGCAGCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576823.1
CDS TCA 72 bp TCGCTCCTCCCATCAAGTTGGGTCCTAGGTGCTAGATaGACACAGGTTGAAGCTGGCTGGCCTGGTCCCATA +
Preference number: 6 (lower is better)
Translates to: SLLPSSWVLGAR*TQVEAGWPGPI
Trigger: TATGGGACCAGGCCAGCCAGCTTCAACCTGTGTTCATCTAGCACCTAGGACCCAACTTGATGGGAGGAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000570455.1
ENST00000570790.5
ENST00000571642.5
CDS TCA 72 bp GCATTCGGGCAGAGCGAGCAGCTTGCTCCTGTCTCCTaGTACGGATTCGACGTTCTTCATCTGGATCCAAAG +
Preference number: 6 (lower is better)
Translates to: AFGQSEQLAPVS*YGFDVLHLDPK
Trigger: CTTTGGATCCAGATGAAGAACGTCGAATCCGTATCAGGAGACAGGAGCAAGCTGCTCGCTCTGCCCGAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000572370.5
ENST00000576823.1
CDS GCA 72 bp CTTTCAGCTTTGCGGAGTCCCGGCAAGAAGCTGCTTTaGTACAGAAGGTCGACTTGTTTCCTGTGGGAATGT +
Preference number: 6 (lower is better)
Translates to: LSALRSPGKKLL*YRRSTCFLWEC
Trigger: ACATTCCCACAGGAAACAAGTCGACCTTCTGTAGCAAAGCAGCTTCTTGCCGGGACTCCGCAAAGCTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542826.6
CDS CAA 72 bp TGTCTGCTGCACTCTGCTTTTACTGTGAGGTTGGCTTaGTCTACCTCTTTCAGCTTTGCGGAGTCCCGGCAA +
Preference number: 6 (lower is better)
Translates to: CLLHSAFTVRLA*STSFSFAESRQ
Trigger: TTGCCGGGACTCCGCAAAGCTGAAAGAGGTAGACAAAGCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542826.6
CDS GCA 72 bp GGTCTCCAGCAAGGCGTTATTCCCAAAACAGAGCTTTaGCATGGTAAACTAGCATGTTCCAGCAGGGTGGTT +
Preference number: 6 (lower is better)
Translates to: GLQQGVIPKTEL*HGKLACSSRVV
Trigger: AACCACCCTGCTGGAACATGCTAGTTTACCATGGCAAAGCTCTGTTTTGGGAATAACGCCTTGCTGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571642.5
CDS CCA 72 bp TACTTTGGCACCAGAGCTGGAGATTTCTACTTTGGATaGCTGGTGGCTACACTGACAGGCTGCTTGACTCTT +
Preference number: 6 (lower is better)
Translates to: YFGTRAGDFYFG*LVATLTGCLTL
Trigger: AAGAGTCAAGCAGCCTGTCAGTGTAGCCACCAGCCATCCAAAGTAGAAATCTCCAGCTCTGGTGCCAAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
ENST00000576823.1
CDS CCA 72 bp TTTTCTGTTCACTTATGTTTTTGTGGTCACCTATCCTaGGATGAGGCTGAAGTCCCGGATCATGGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: FSVHLCFCGHLS*DEAEVPDHGWV
Trigger: CACCCACCCATGATCCGGGACTTCAGCCTCATCCCAGGATAGGTGACCACAAAAACATAAGTGAACAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572235.1
ENST00000572370.5
ENST00000576823.1
CDS CAA 90 bp TTGCCATTACAGGGCCTTTCTAACATGATGTTCACGGCTGGATCCTaGCGATCCACTGTCTTCGTGATTCATTGTTTTCTTCCTGCATCC +
Preference number: 6 (lower is better)
Translates to: LPLQGLSNMMFTAGS*RSTVFVIHCFLPAS
Trigger: GGATGCAGGAAGAAAACAATGAATCACGAAGACAGTGGATCGCAAGGATCCAGCCGTGAACATCATGTTAGAAAGGCCCTGTAATGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575027.1
CDS TCA 72 bp GGCATGTGGGCAAGAATATCGGATCGCCAAGTTGCTTaGATGTGTAGGAACATTCCTATTAAACTGCAGCTG +
Preference number: 6 (lower is better)
Translates to: GMWARISDRQVA*MCRNIPIKLQL
Trigger: CAGCTGCAGTTTAATAGGAATGTTCCTACACATTCAAGCAACTTGGCGATCCGATATTCTTGCCCACATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000571642.5
ENST00000572370.5
CDS TCA 72 bp AGCATAGCTAAGTCTCTCTTGGGATATGACGGAAAATaGAACAGAACTGCCCAGGTCAGGACCAACTCTACA +
Preference number: 6 (lower is better)
Translates to: SIAKSLLGYDGK*NRTAQVRTNST
Trigger: TGTAGAGTTGGTCCTGACCTGGGCAGTTCTGTTTCATTTTCCGTCATATCCCAAGAGAGACTTAGCTATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
CDS CCA 72 bp GATGAGATGAGTAAAGGTATACTTTGGCACCAGAGCTaGAGATTTCTACTTTGGATGGCTGGTGGCTACACT +
Preference number: 6 (lower is better)
Translates to: DEMSKGILWHQS*RFLLWMAGGYT
Trigger: AGTGTAGCCACCAGCCATCCAAAGTAGAAATCTCCAGCTCTGGTGCCAAAGTATACCTTTACTCATCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572370.5
ENST00000576823.1
CDS CAA 72 bp CAGGGCCTTTCTAACATGATGTTCACGGCTGGATCCTaGCGATCCACTGTCTTCGTGATTCATTGTTTTCTT +
Preference number: 6 (lower is better)
Translates to: QGLSNMMFTAGS*RSTVFVIHCFL
Trigger: AAGAAAACAATGAATCACGAAGACAGTGGATCGCAAGGATCCAGCCGTGAACATCATGTTAGAAAGGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575027.1
CDS CCA 72 bp TTGTGGATACAACTGCTCAGTTCTTTCTGGAGTCGCTaGACTTCTAGCAGGCTTTTCTGTTCACTTATGTTT +
Preference number: 6 (lower is better)
Translates to: LWIQLLSSFWSR*TSSRLFCSLMF
Trigger: AAACATAAGTGAACAGAAAAGCCTGCTAGAAGTCCAGCGACTCCAGAAAGAACTGAGCAGTTGTATCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572235.1
ENST00000572370.5
ENST00000576823.1
CDS CCA 72 bp TCTTCAATTTTGTGGATACAACTGCTCAGTTCTTTCTaGAGTCGCTGGACTTCTAGCAGGCTTTTCTGTTCA +
Preference number: 6 (lower is better)
Translates to: SSILWIQLLSSF*SRWTSSRLFCS
Trigger: TGAACAGAAAAGCCTGCTAGAAGTCCAGCGACTCCAGAAAGAACTGAGCAGTTGTATCCACAAAATTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000572235.1
ENST00000572370.5
ENST00000576823.1
CDS CAA 72 bp CTAATGGCATGTGGGCAAGAATATCGGATCGCCAAGTaGCTTGAATGTGTAGGAACATTCCTATTAAACTGC +
Preference number: 6 (lower is better)
Translates to: LMACGQEYRIAK*LECVGTFLLNC
Trigger: GCAGTTTAATAGGAATGTTCCTACACATTCAAGCAACTTGGCGATCCGATATTCTTGCCCACATGCCATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000571642.5
ENST00000572370.5
CDS GCA 72 bp ACATTAACAAGTCTTAATACTAGTCAGAAAGCAGTATaGTTCACTCTGTCAGGTGGCCCGAAGGCATATAAC +
Preference number: 6 (lower is better)
Translates to: TLTSLNTSQKAV*FTLSGGPKAYN
Trigger: GTTATATGCCTTCGGGCCACCTGACAGAGTGAAGCATACTGCTTTCTGACTAGTATTAAGACTTGTTAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571642.5
CDS CAA 90 bp TTTTCAATTCTAATGGCATGTGGGCAAGAATATCGGATCGCCAAGTaGCTTGAATGTGTAGGAACATTCCTATTAAACTGCAGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: FSILMACGQEYRIAK*LECVGTFLLNCSWF
Trigger: GAACCAGCTGCAGTTTAATAGGAATGTTCCTACACATTCAAGCAACTTGGCGATCCGATATTCTTGCCCACATGCCATTAGAATTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000571642.5
ENST00000572370.5
CDS CAA 90 bp TCAGGACCAACTCTACAATCTGCATCTTTACAATGGTATGATTCATaGTATGAGTGCTTCAGTTTTTCAATTCTAATGGCATGTGGGCAA +
Preference number: 6 (lower is better)
Translates to: SGPTLQSASLQWYDS*YECFSFSILMACGQ
Trigger: TTGCCCACATGCCATTAGAATTGAAAAACTGAAGCACTCATACAATGAATCATACCATTGTAAAGATGCAGATTGTAGAGTTGGTCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361413.8
ENST00000570790.5
ENST00000571642.5
ENST00000572370.5