RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIAA0513 (Homo sapiens)

Ensembl gene IDs: ENSG00000135709

Ensembl transcript IDs: ENST00000258180.7, ENST00000538274.5, ENST00000562388.1, ENST00000562564.1, ENST00000562580.5, ENST00000566428.5, ENST00000567328.5, ENST00000683363.1

Found 1407 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCACCCATTGCAGGGAAGGTGGCCCACGGCCACCCACCGTGAGTaGCAGCGCCGGCCCTCCACCACTGGGTGTGCCGGCTGCAGCCCC +
Preference number: 1 (lower is better)
Translates to: VHPLQGRWPTATHRE*QRRPSTTGCAGCSP
Trigger: GGGGCTGCAGCCGGCACACCCAGTGGTGGAGGGCCGGCGCTGCCACTCACGGTGGGTGGCCGTGGGCCACCTTCCCTGCAATGGGTGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp GCGTGTGCACCCATTGCAGGGAAGGTGGCCCACGGCCACCCACCGTaGGTGGCAGCGCCGGCCCTCCACCACTGGGTGTGCCGGCTGCAG +
Preference number: 1 (lower is better)
Translates to: ACAPIAGKVAHGHPP*VAAPALHHWVCRLQ
Trigger: CTGCAGCCGGCACACCCAGTGGTGGAGGGCCGGCGCTGCCACTCACGGTGGGTGGCCGTGGGCCACCTTCCCTGCAATGGGTGCACACGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp GAGAGGGCTGGATGGGAGCCGCGTGTGCACCCATTGCAGGGAAGGTaGCCCACGGCCACCCACCGTGAGTGGCAGCGCCGGCCCTCCACC +
Preference number: 1 (lower is better)
Translates to: ERAGWEPRVHPLQGR*PTATHREWQRRPST
Trigger: GGTGGAGGGCCGGCGCTGCCACTCACGGTGGGTGGCCGTGGGCCACCTTCCCTGCAATGGGTGCACACGCGGCTCCCATCCAGCCCTCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp AGCCCCACGCTGAGAGGGCTGGATGGGAGCCGCGTGTGCACCCATTaGAGGGAAGGTGGCCCACGGCCACCCACCGTGAGTGGCAGCGCC +
Preference number: 1 (lower is better)
Translates to: SPTLRGLDGSRVCTH*REGGPRPPTVSGSA
Trigger: GGCGCTGCCACTCACGGTGGGTGGCCGTGGGCCACCTTCCCTGCAATGGGTGCACACGCGGCTCCCATCCAGCCCTCTCAGCGTGGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp GCAGGAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTaGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCC +
Preference number: 1 (lower is better)
Translates to: AGVALGAAGFMQVIG*GDGRALGPGEWHMA
Trigger: GGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTCCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp CTAGTTCTAGGGCAGCAGGAGTGGCTCTGGGTGCTGCTGGCTTCATaGAGGTCATCGGGTGGGGTGACGGCCGGGCGCTGGGCCCGGGAG +
Preference number: 1 (lower is better)
Translates to: LVLGQQEWLWVLLAS*RSSGGVTAGRWARE
Trigger: CTCCCGGGCCCAGCGCCCGGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTCCTGCTGCCCTAGAACTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp CTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCGGGCGCTaGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTG +
Preference number: 1 (lower is better)
Translates to: LLASCRSSGGVTAGR*ARENGTWPQSSCGV
Trigger: CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp AGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTaGCGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGT +
Preference number: 1 (lower is better)
Translates to: SGSGCCWLHAGHRVG*RPGAGPGRMAHGLS
Trigger: ACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GCAAGGGTTCCTGGGGTGCGTGGCCTGTGTGGCTCCGGGAAGCCCTaGTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAG +
Preference number: 1 (lower is better)
Translates to: ARVPGVRGLCGSGKP*SVCGLSLCEPGGVQ
Trigger: CTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCAGGGCTTCCCGGAGCCACACAGGCCACGCACCCCAGGAACCCTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp GGGAATAGTGAGGACCAGCCACAGCCCCACGCTGAGAGGGCTGGATaGGAGCCGCGTGTGCACCCATTGCAGGGAAGGTGGCCCACGGCC +
Preference number: 1 (lower is better)
Translates to: GNSEDQPQPHAERAG*EPRVHPLQGRWPTA
Trigger: GGCCGTGGGCCACCTTCCCTGCAATGGGTGCACACGCGGCTCCCATCCAGCCCTCTCAGCGTGGGGCTGTGGCTGGTCCTCACTATTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp GACCGCATGTCAGAGGAGGTAGCCAGGAAGGGCGGGAGGGGAGGATaGCAGGAGGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGG +
Preference number: 1 (lower is better)
Translates to: DRMSEEVARKGGRGG*QEEGEPRGPISQSG
Trigger: CCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCCTCCTGCCATCCTCCCCTCCCGCCCTTCCTGGCTACCTCCTCTGACATGCGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GGCACTGCTGTGACTCTGGCGGAGACACACAGCTCCCGGGCCGTCTaGAGGCACACACACGTCCCTCTGGTGGGAGCCAGGTCTTGCTCC +
Preference number: 1 (lower is better)
Translates to: GTAVTLAETHSSRAV*RHTHVPLVGARSCS
Trigger: GGAGCAAGACCTGGCTCCCACCAGAGGGACGTGTGTGTGCCTGCAGACGGCCCGGGAGCTGTGTGTCTCCGCCAGAGTCACAGCAGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GGAGCTGTCCGCCAGGCGGGCGCATTTCAGACGGTCTGTGTGGTCTaGCGCGGACACCTCGGCACTGCTGTGACTCTGGCGGAGACACAC +
Preference number: 1 (lower is better)
Translates to: GAVRQAGAFQTVCVV*RGHLGTAVTLAETH
Trigger: GTGTGTCTCCGCCAGAGTCACAGCAGTGCCGAGGTGTCCGCGGCAGACCACACAGACCGTCTGAAATGCGCCCGCCTGGCGGACAGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp CCCCACGCAGGGACCTTTGAGCAGTGTGGCTGGGTCTGCTTGCTCTaGACCACAGCCCAGCTCATGCCTGCTCTGCCCAGGTCCTGGGGG +
Preference number: 1 (lower is better)
Translates to: PHAGTFEQCGWVCLL*TTAQLMPALPRSWG
Trigger: CCCCCAGGACCTGGGCAGAGCAGGCATGAGCTGGGCTGTGGTGCAGAGCAAGCAGACCCAGCCACACTGCTCAAAGGTCCCTGCGTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp GGACCCAGCATGCAGGTGTTGGGGTCAGGCCCCGGGCCCATGGGCTaGCCTGGAGTACCTGGTACAGACCCACAGAAGAGAAGGGCCGTG +
Preference number: 1 (lower is better)
Translates to: GPSMQVLGSGPGPMG*PGVPGTDPQKRRAV
Trigger: CACGGCCCTTCTCTTCTGTGGGTCTGTACCAGGTACTCCAGGCCAGCCCATGGGCCCGGGGCCTGACCCCAACACCTGCATGCTGGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp GGCACCAACACATTCCTGTTCCTGGCCCGCGGCAGCAAGGGTTCCTaGGGTGCGTGGCCTGTGTGGCTCCGGGAAGCCCTGCTCTGTCTG +
Preference number: 1 (lower is better)
Translates to: GTNTFLFLARGSKGS*GAWPVWLREALLCL
Trigger: CAGACAGAGCAGGGCTTCCCGGAGCCACACAGGCCACGCACCCCAGGAACCCTTGCTGCCGCGGGCCAGGAACAGGAATGTGTTGGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp TTCAGACGGTCTGTGTGGTCTGCCGCGGACACCTCGGCACTGCTGTaGCTCTGGCGGAGACACACAGCTCCCGGGCCGTCTGCAGGCACA +
Preference number: 1 (lower is better)
Translates to: FRRSVWSAADTSALL*LWRRHTAPGPSAGT
Trigger: TGTGCCTGCAGACGGCCCGGGAGCTGTGTGTCTCCGCCAGAGTCACAGCAGTGCCGAGGTGTCCGCGGCAGACCACACAGACCGTCTGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp CCCTGGGTGTGCCCCTGGTGTGACACCTCCCCACGCAGGGACCTTTaGGCAGTGTGGCTGGGTCTGCTTGCTCTGCACCACAGCCCAGCT +
Preference number: 1 (lower is better)
Translates to: PWVCPWCDTSPRRDL*AVWLGLLALHHSPA
Trigger: AGCTGGGCTGTGGTGCAGAGCAAGCAGACCCAGCCACACTGCTCAAAGGTCCCTGCGTGGGGAGGTGTCACACCAGGGGCACACCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp CCAGAGCTCTCCTACACCCAGGTGGCCCTGGGTGTGCCCCTGGTGTaGCACCTCCCCACGCAGGGACCTTTGAGCAGTGTGGCTGGGTCT +
Preference number: 1 (lower is better)
Translates to: PELSYTQVALGVPLV*HLPTQGPLSSVAGS
Trigger: AGACCCAGCCACACTGCTCAAAGGTCCCTGCGTGGGGAGGTGTCACACCAGGGGCACACCCAGGGCCACCTGGGTGTAGGAGAGCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp CGCATTTCAGACGGTCTGTGTGGTCTGCCGCGGACACCTCGGCACTaGTGTGACTCTGGCGGAGACACACAGCTCCCGGGCCGTCTGCAG +
Preference number: 1 (lower is better)
Translates to: RISDGLCGLPRTPRH*CDSGGDTQLPGRLQ
Trigger: CTGCAGACGGCCCGGGAGCTGTGTGTCTCCGCCAGAGTCACAGCAGTGCCGAGGTGTCCGCGGCAGACCACACAGACCGTCTGAAATGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp CTGTGTGGCTCCGGGAAGCCCTGCTCTGTCTGTGGTCTTAGCCTGTaGGAGCCAGGCGGGGTGCAGCTGGCATCCGACTCCCCTTTCCTG +
Preference number: 1 (lower is better)
Translates to: LCGSGKPCSVCGLSL*EPGGVQLASDSPFL
Trigger: CAGGAAAGGGGAGTCGGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCAGGGCTTCCCGGAGCCACACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp CACACAGCTCCCGGGCCGTCTGCAGGCACACACACGTCCCTCTGGTaGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACAC +
Preference number: 1 (lower is better)
Translates to: HTAPGPSAGTHTSLW*EPGLAPAGQEHPLH
Trigger: GTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCAGAGGGACGTGTGTGTGCCTGCAGACGGCCCGGGAGCTGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp CAGCATGCAGGTGTTGGGGTCAGGCCCCGGGCCCATGGGCTGGCCTaGAGTACCTGGTACAGACCCACAGAAGAGAAGGGCCGTGGTTCC +
Preference number: 1 (lower is better)
Translates to: QHAGVGVRPRAHGLA*STWYRPTEEKGRGS
Trigger: GGAACCACGGCCCTTCTCTTCTGTGGGTCTGTACCAGGTACTCCAGGCCAGCCCATGGGCCCGGGGCCTGACCCCAACACCTGCATGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp GCTGACGACGAGGCGGCTGAAGGGAGCGCCTGGACAGTCAGCCCTTaGGTGTGGCCTGAGTTTCACCGGTGCAAGGAGGAGAGCAGTGCC +
Preference number: 1 (lower is better)
Translates to: ADDEAAEGSAWTVSP*VWPEFHRCKEESSA
Trigger: GGCACTGCTCTCCTCCTTGCACCGGTGAAACTCAGGCCACACTCAAGGGCTGACTGTCCAGGCGCTCCCTTCAGCCGCCTCGTCGTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GCCGTCTGCAGGCACACACACGTCCCTCTGGTGGGAGCCAGGTCTTaGTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCCACTCTCT +
Preference number: 1 (lower is better)
Translates to: AVCRHTHVPLVGARS*SSRPRASSTPHPLS
Trigger: AGAGAGTGGGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCAGAGGGACGTGTGTGTGCCTGCAGACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp CAGAGGCTGGAGGAGCTACAAAGGTCTGGTGGGGAAGGGGCCCAATaGTCAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGC +
Preference number: 1 (lower is better)
Translates to: QRLEELQRSGGEGAQ*SALRGRGHATGLPC
Trigger: GCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTGAGCATTGGGCCCCTTCCCCACCAGACCTTTGTAGCTCCTCCAGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GCCACAGCCGGAAGGAGACCACAGGCAGCCTCCAGAGCCACTGCCTaGTCTGCTCACAGCACAAGGGGCTGTCTCTCCGGCATCCTGTGT +
Preference number: 1 (lower is better)
Translates to: ATAGRRPQAASRATA*SAHSTRGCLSGILC
Trigger: ACACAGGATGCCGGAGAGACAGCCCCTTGTGCTGTGAGCAGAGCAGGCAGTGGCTCTGGAGGCTGCCTGTGGTCTCCTTCCGGCTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp CACCTCCCCACGCAGGGACCTTTGAGCAGTGTGGCTGGGTCTGCTTaGTCTGCACCACAGCCCAGCTCATGCCTGCTCTGCCCAGGTCCT +
Preference number: 1 (lower is better)
Translates to: HLPTQGPLSSVAGSA*SAPQPSSCLLCPGP
Trigger: AGGACCTGGGCAGAGCAGGCATGAGCTGGGCTGTGGTGCAGAGCAAGCAGACCCAGCCACACTGCTCAAAGGTCCCTGCGTGGGGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GTGACACCTCCCCACGCAGGGACCTTTGAGCAGTGTGGCTGGGTCTaGTTGCTCTGCACCACAGCCCAGCTCATGCCTGCTCTGCCCAGG +
Preference number: 1 (lower is better)
Translates to: VTPPHAGTFEQCGWV*LLCTTAQLMPALPR
Trigger: CCTGGGCAGAGCAGGCATGAGCTGGGCTGTGGTGCAGAGCAAGCAGACCCAGCCACACTGCTCAAAGGTCCCTGCGTGGGGAGGTGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp AGCCCTGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTaGAGCTGGCATCCGACTCCCCTTTCCTGTGGACGCAGCTGGGAA +
Preference number: 1 (lower is better)
Translates to: SPALSVVLACASQAG*SWHPTPLSCGRSWE
Trigger: TTCCCAGCTGCGTCCACAGGAAAGGGGAGTCGGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp CCTTGCCAGCACCAGAGGCAGGGCTCCCACGGCGGCACCCATCCTTaGGAGCCCATCGGTCACAGGATTGATTCCGTCCCTTTCCTGGAG +
Preference number: 1 (lower is better)
Translates to: PCQHQRQGSHGGTHP*EPIGHRIDSVPFLE
Trigger: CTCCAGGAAAGGGACGGAATCAATCCTGTGACCGATGGGCTCGCAAGGATGGGTGCCGCCGTGGGAGCCCTGCCTCTGGTGCTGGCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp AGACACACAGCTCCCGGGCCGTCTGCAGGCACACACACGTCCCTCTaGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTA +
Preference number: 1 (lower is better)
Translates to: RHTAPGPSAGTHTSL*WEPGLAPAGQEHPL
Trigger: TAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCAGAGGGACGTGTGTGTGCCTGCAGACGGCCCGGGAGCTGTGTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GCTGGGTCTGCTTGCTCTGCACCACAGCCCAGCTCATGCCTGCTCTaGCCAGGTCCTGGGGGAAGAGAGGAAACCTTGGTGGCAGGTGGT +
Preference number: 1 (lower is better)
Translates to: AGSACSAPQPSSCLL*PGPGGREETLVAGG
Trigger: ACCACCTGCCACCAAGGTTTCCTCTCTTCCCCCAGGACCTGGGCAGAGCAGGCATGAGCTGGGCTGTGGTGCAGAGCAAGCAGACCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GTGTGGCTGGGTCTGCTTGCTCTGCACCACAGCCCAGCTCATGCCTaGTCTGCCCAGGTCCTGGGGGAAGAGAGGAAACCTTGGTGGCAG +
Preference number: 1 (lower is better)
Translates to: VWLGLLALHHSPAHA*SAQVLGEERKPWWQ
Trigger: CTGCCACCAAGGTTTCCTCTCTTCCCCCAGGACCTGGGCAGAGCAGGCATGAGCTGGGCTGTGGTGCAGAGCAAGCAGACCCAGCCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp CACTGCACTCTGCAGGCTAGAGACACCCACACAAACCCAATCCCTTaGCAGCACCAGAGGCAGGGCTCCCACGGCGGCACCCATCCTTGC +
Preference number: 1 (lower is better)
Translates to: HCTLQARDTHTNPIP*QHQRQGSHGGTHPC
Trigger: GCAAGGATGGGTGCCGCCGTGGGAGCCCTGCCTCTGGTGCTGGCAAGGGATTGGGTTTGTGTGGGTGTCTCTAGCCTGCAGAGTGCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp CTCAAGGTTCCCGTCACTTCCTGTTCCTGCCCCACAGCGGGAGACTaGGGAATAGTGAGGACCAGCCACAGCCCCACGCTGAGAGGGCTG +
Preference number: 1 (lower is better)
Translates to: LKVPVTSCSCPTAGD*GIVRTSHSPTLRGL
Trigger: CAGCCCTCTCAGCGTGGGGCTGTGGCTGGTCCTCACTATTCCCCAGTCTCCCGCTGTGGGGCAGGAACAGGAAGTGACGGGAACCTTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp CCTGGTGTGACACCTCCCCACGCAGGGACCTTTGAGCAGTGTGGCTaGGTCTGCTTGCTCTGCACCACAGCCCAGCTCATGCCTGCTCTG +
Preference number: 1 (lower is better)
Translates to: PGVTPPHAGTFEQCG*VCLLCTTAQLMPAL
Trigger: CAGAGCAGGCATGAGCTGGGCTGTGGTGCAGAGCAAGCAGACCCAGCCACACTGCTCAAAGGTCCCTGCGTGGGGAGGTGTCACACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp CTCCCACGGCGGCACCCATCCTTGCGAGCCCATCGGTCACAGGATTaGTTCCGTCCCTTTCCTGGAGAGCATGTGATACCCAGGCCCAGG +
Preference number: 1 (lower is better)
Translates to: LPRRHPSLRAHRSQD*FRPFPGEHVIPRPR
Trigger: CCTGGGCCTGGGTATCACATGCTCTCCAGGAAAGGGACGGAATCAATCCTGTGACCGATGGGCTCGCAAGGATGGGTGCCGCCGTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GGGCCCAATGCTCAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTaGCCTGCACGTTGCACAGATCTGCTTCTCTCCAGCCACTGTCAC +
Preference number: 1 (lower is better)
Translates to: GPNAQRLEAEATPLA*PARCTDLLLSSHCH
Trigger: GTGACAGTGGCTGGAGAGAAGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTGAGCATTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp CCGGTGCAAGGAGGAGAGCAGTGCCCTGGAGCCGTGGCTGGACGCTaGAGGAGGTGTGTATTATCTGCAGTTGGCATCAGAGCGAGGGGT +
Preference number: 1 (lower is better)
Translates to: PVQGGEQCPGAVAGR*RRCVLSAVGIRARG
Trigger: ACCCCTCGCTCTGATGCCAACTGCAGATAATACACACCTCCTGCAGCGTCCAGCCACGGCTCCAGGGCACTGCTCTCCTCCTTGCACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GGGCGGCAGAGTGCCTGCAATGGCCCCATGGATGACAGGCCTTCGTaGTCCTGGTTTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCT +
Preference number: 1 (lower is better)
Translates to: GRQSACNGPMDDRPS*SWFWAFCLLGLGTS
Trigger: AGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAAACCAGGAGCACGAAGGCCTGTCATCCATGGGGCCATTGCAGGCACTCTGCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp ACCTTGAGTGAGAATCTGGCCGTTTCGCCTTGTGGCTGCGGAAACTaGGGAGGGACCAGCCTCAGAACACCTGCCTGCTGGGCCCAGAGG +
Preference number: 1 (lower is better)
Translates to: TLSENLAVSPCGCGN*GGTSLRTPACWAQR
Trigger: CCTCTGGGCCCAGCAGGCAGGTGTTCTGAGGCTGGTCCCTCCTCAGTTTCCGCAGCCACAAGGCGAAACGGCCAGATTCTCACTCAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp CCCATCGGTCACAGGATTGATTCCGTCCCTTTCCTGGAGAGCATGTaGTACCCAGGCCCAGGGATGCACGGGGGACTGAGGCGCAGAAGG +
Preference number: 1 (lower is better)
Translates to: PIGHRIDSVPFLESM*YPGPGMHGGLRRRR
Trigger: CCTTCTGCGCCTCAGTCCCCCGTGCATCCCTGGGCCTGGGTATCACATGCTCTCCAGGAAAGGGACGGAATCAATCCTGTGACCGATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GTGCCCTGGAGCCGTGGCTGGACGCTGCAGGAGGTGTGTATTATCTaGAGTTGGCATCAGAGCGAGGGGTGTCCACACAACCCTCGCTCT +
Preference number: 1 (lower is better)
Translates to: VPWSRGWTLQEVCII*SWHQSEGCPHNPRS
Trigger: AGAGCGAGGGTTGTGTGGACACCCCTCGCTCTGATGCCAACTGCAGATAATACACACCTCCTGCAGCGTCCAGCCACGGCTCCAGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp CTACAGGCAGCGCCGCGCTCCCAAGGACTCTCACTCACTGCACTCTaGAGGCTAGAGACACCCACACAAACCCAATCCCTTGCCAGCACC +
Preference number: 1 (lower is better)
Translates to: LQAAPRSQGLSLTAL*RLETPTQTQSLAST
Trigger: GGTGCTGGCAAGGGATTGGGTTTGTGTGGGTGTCTCTAGCCTGCAGAGTGCAGTGAGTGAGAGTCCTTGGGAGCGCGGCGCTGCCTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GGCACAGCTACAGGCAGCGCCGCGCTCCCAAGGACTCTCACTCACTaGACTCTGCAGGCTAGAGACACCCACACAAACCCAATCCCTTGC +
Preference number: 1 (lower is better)
Translates to: GTATGSAALPRTLTH*TLQARDTHTNPIPC
Trigger: GCAAGGGATTGGGTTTGTGTGGGTGTCTCTAGCCTGCAGAGTGCAGTGAGTGAGAGTCCTTGGGAGCGCGGCGCTGCCTGTAGCTGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GCAGGGACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTaGAGGGAGATCTGGAGTCCACCCCTTAGGGCTGCACCTCCCAGA +
Preference number: 1 (lower is better)
Translates to: AGTPPQQPKPSQAVS*REIWSPPLRAAPPR
Trigger: TCTGGGAGGTGCAGCCCTAAGGGGTGGACTCCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGTCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp TGCTTCTTCCATTTGGTGTCTCAGGCACCAACACATTCCTGTTCCTaGCCCGCGGCAGCAAGGGTTCCTGGGGTGCGTGGCCTGTGTGGC +
Preference number: 1 (lower is better)
Translates to: CFFHLVSQAPTHSCS*PAAARVPGVRGLCG
Trigger: GCCACACAGGCCACGCACCCCAGGAACCCTTGCTGCCGCGGGCCAGGAACAGGAATGTGTTGGTGCCTGAGACACCAAATGGAAGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp AGGCCCCCTGAGGGCCTGTATGGAGGGCGGCTTCCGGGCCAGTGTTaGCCGCAGGAGAACAGTCTTGATGTGCTTCTTCCATTTGGTGTC +
Preference number: 1 (lower is better)
Translates to: RPPEGLYGGRLPGQC*PQENSLDVLLPFGV
Trigger: GACACCAAATGGAAGAAGCACATCAAGACTGTTCTCCTGCGGCCAACACTGGCCCGGAAGCCGCCCTCCATACAGGCCCTCAGGGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp AGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATCTaGTTCTCTCCAGCCACTGTCACTCCCAACTCAGACTTTCCTGCC +
Preference number: 1 (lower is better)
Translates to: RQRPRHWLALHVAQI*FSPATVTPNSDFPA
Trigger: GGCAGGAAAGTCTGAGTTGGGAGTGACAGTGGCTGGAGAGAAGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTaGACAGATCTGCTTCTCTCCAGCCACTGTCACTCCCAACTCAGA +
Preference number: 1 (lower is better)
Translates to: QRLEAEATPLACPAR*TDLLLSSHCHSQLR
Trigger: TCTGAGTTGGGAGTGACAGTGGCTGGAGAGAAGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp CAATGCTCAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTaGACGTTGCACAGATCTGCTTCTCTCCAGCCACTGTCACTCCCA +
Preference number: 1 (lower is better)
Translates to: QCSALRGRGHATGLP*TLHRSASLQPLSLP
Trigger: TGGGAGTGACAGTGGCTGGAGAGAAGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTGAGCATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp TTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTaGAATGGCCCCATGGATGACAGGCCTTCGTGCTCCTGGTTTTGG +
Preference number: 1 (lower is better)
Translates to: FTRIGTALKVGRQSA*NGPMDDRPSCSWFW
Trigger: CCAAAACCAGGAGCACGAAGGCCTGTCATCCATGGGGCCATTGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp AGCCTGGCACTCGGGGTACAACTGGTCACCTCGGCTTTAGCTGTGTaGCCCAAGGGACACTTTGGCACATGGATGGGGGTCGCAGACACA +
Preference number: 1 (lower is better)
Translates to: SLALGVQLVTSALAV*PKGHFGTWMGVADT
Trigger: TGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCTTGGGTCACACAGCTAAAGCCGAGGTGACCAGTTGTACCCCGAGTGCCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp TGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACACTTCCTaGGTTTACGGAGGGGCCACCAGAGCTCTCCTACACCCAGGTGGC +
Preference number: 1 (lower is better)
Translates to: CWDWEPLPRKSPDTS*VYGGATRALLHPGG
Trigger: GCCACCTGGGTGTAGGAGAGCTCTGGTGGCCCCTCCGTAAACTCAGGAAGTGTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GGATGTGAGCACCGCGAGTCTAGGAAAGAGAAAGCAGAGGGCGTGTaGATGGGAGACGCCACTGATAGTTCCAACGGGGGCCACCAGGTT +
Preference number: 1 (lower is better)
Translates to: GCEHRESRKEKAEGV*MGDATDSSNGGHQV
Trigger: AACCTGGTGGCCCCCGTTGGAACTATCAGTGGCGTCTCCCATGCACACGCCCTCTGCTTTCTCTTTCCTAGACTCGCGGTGCTCACATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp CTGCTCTGCTCACAGCACAAGGGGCTGTCTCTCCGGCATCCTGTGTaGATGGAGCACAGAGGAGACCTTCTCTGTCAGCCTTCCTCCAAC +
Preference number: 1 (lower is better)
Translates to: LLCSQHKGLSLRHPV*MEHRGDLLCQPSSN
Trigger: GTTGGAGGAAGGCTGACAGAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTTGTGCTGTGAGCAGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp TTTCCTGTGCTTCTTGCGAGGGACACACAGCACAACGCTGCTTCGTaGCCATGGAGGCTTCTCTGCTTCAGAAGGGAGCTGTCCGCCAGG +
Preference number: 1 (lower is better)
Translates to: FPVLLARDTQHNAAS*PWRLLCFRRELSAR
Trigger: CCTGGCGGACAGCTCCCTTCTGAAGCAGAGAAGCCTCCATGGTCACGAAGCAGCGTTGTGCTGTGTGTCCCTCGCAAGAAGCACAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp TCTGCTCACAGCACAAGGGGCTGTCTCTCCGGCATCCTGTGTGGATaGAGCACAGAGGAGACCTTCTCTGTCAGCCTTCCTCCAACTCTG +
Preference number: 1 (lower is better)
Translates to: SAHSTRGCLSGILCG*STEETFSVSLPPTL
Trigger: CAGAGTTGGAGGAAGGCTGACAGAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTTGTGCTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp CTGCAGTTGGCATCAGAGCGAGGGGTGTCCACACAACCCTCGCTCTaGCATTTCTCTAAATGGATTCGGTGGAGACATGCCCGTTGGGGC +
Preference number: 1 (lower is better)
Translates to: LQLASERGVSTQPSL*HFSKWIRWRHARWG
Trigger: GCCCCAACGGGCATGTCTCCACCGAATCCATTTAGAGAAATGTCAGAGCGAGGGTTGTGTGGACACCCCTCGCTCTGATGCCAACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp TGGAGGGCGGCTTCCGGGCCAGTGTTGGCCGCAGGAGAACAGTCTTaGTGTGCTTCTTCCATTTGGTGTCTCAGGCACCAACACATTCCT +
Preference number: 1 (lower is better)
Translates to: WRAASGPVLAAGEQS*CASSIWCLRHQHIP
Trigger: AGGAATGTGTTGGTGCCTGAGACACCAAATGGAAGAAGCACATCAAGACTGTTCTCCTGCGGCCAACACTGGCCCGGAAGCCGCCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GGCGGCTTCCGGGCCAGTGTTGGCCGCAGGAGAACAGTCTTGATGTaGTTCTTCCATTTGGTGTCTCAGGCACCAACACATTCCTGTTCC +
Preference number: 1 (lower is better)
Translates to: GGFRASVGRRRTVLM*FFHLVSQAPTHSCS
Trigger: GGAACAGGAATGTGTTGGTGCCTGAGACACCAAATGGAAGAAGCACATCAAGACTGTTCTCCTGCGGCCAACACTGGCCCGGAAGCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp GAGGCATTCCCCGGAGGGAAACCTTCCAAGCAGTGGCCGGGTAAGTaGCTCTCAGGCGTTTCTGTGGTACTCACAAACAAGACGGGACTT +
Preference number: 1 (lower is better)
Translates to: EAFPGGKPSKQWPGK*LSGVSVVLTNKTGL
Trigger: AAGTCCCGTCTTGTTTGTGAGTACCACAGAAACGCCTGAGAGTCACTTACCCGGCCACTGCTTGGAAGGTTTCCCTCCGGGGAATGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp TGGGACTGGAAACGGGACAGGAAAAGGAGTGAGAACGACCTTGAGTaGGAATCTGGCCGTTTCGCCTTGTGGCTGCGGAAACTGAGGAGG +
Preference number: 1 (lower is better)
Translates to: WDWKRDRKRSENDLE*ESGRFALWLRKLRR
Trigger: CCTCCTCAGTTTCCGCAGCCACAAGGCGAAACGGCCAGATTCTCACTCAAGGTCGTTCTCACTCCTTTTCCTGTCCCGTTTCCAGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp TATAGCGCTGCTCAAGGGAGTTCAGGCTGCAGTGCACTCAGGCTCTaGCTGTTTTGTCAGGTCCCAGAGTCTGCAGATAAAGTGGGGAGC +
Preference number: 1 (lower is better)
Translates to: YSAAQGSSGCSALRL*LFCQVPESADKVGS
Trigger: GCTCCCCACTTTATCTGCAGACTCTGGGACCTGACAAAACAGTCAGAGCCTGAGTGCACTGCAGCCTGAACTCCCTTGAGCAGCGCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp ACTTCTCTTTCCTGTGCTTCTTGCGAGGGACACACAGCACAACGCTaGTTCGTGACCATGGAGGCTTCTCTGCTTCAGAAGGGAGCTGTC +
Preference number: 1 (lower is better)
Translates to: TSLSCASCEGHTAQR*FVTMEASLLQKGAV
Trigger: GACAGCTCCCTTCTGAAGCAGAGAAGCCTCCATGGTCACGAAGCAGCGTTGTGCTGTGTGTCCCTCGCAAGAAGCACAGGAAAGAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp AACCTTCCAAGCAGTGGCCGGGTAAGTGACTCTCAGGCGTTTCTGTaGTACTCACAAACAAGACGGGACTTATCTGACCGCATGTCAGAG +
Preference number: 1 (lower is better)
Translates to: NLPSSGRVSDSQAFL*YSQTRRDLSDRMSE
Trigger: CTCTGACATGCGGTCAGATAAGTCCCGTCTTGTTTGTGAGTACCACAGAAACGCCTGAGAGTCACTTACCCGGCCACTGCTTGGAAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp CGCAGAACAAAGTCTGAATGCATTTCAGCTAACACGAATAATGCATaGCTAAGAACGCTGACGACGAGGCGGCTGAAGGGAGCGCCTGGA +
Preference number: 1 (lower is better)
Translates to: RRTKSECISANTNNA*LRTLTTRRLKGAPG
Trigger: TCCAGGCGCTCCCTTCAGCCGCCTCGTCGTCAGCGTTCTTAGTCATGCATTATTCGTGTTAGCTGAAATGCATTCAGACTTTGTTCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GGTTGTCTAGTGGCTACTAAAGAAACTTCTCTTTCCTGTGCTTCTTaGGAGGGACACACAGCACAACGCTGCTTCGTGACCATGGAGGCT +
Preference number: 1 (lower is better)
Translates to: GCLVATKETSLSCAS*EGHTAQRCFVTMEA
Trigger: AGCCTCCATGGTCACGAAGCAGCGTTGTGCTGTGTGTCCCTCGCAAGAAGCACAGGAAAGAGAAGTTTCTTTAGTAGCCACTAGACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp CACCGAGCGGGACACAAGATTGCAAAAATGCAACAGAGAAGATACTaGTGTCACTGCACGCCACTTGGGGGCTACCAACAAGGTAATGTC +
Preference number: 1 (lower is better)
Translates to: HRAGHKIAKMQQRRY*CHCTPLGGYQQGNV
Trigger: GACATTACCTTGTTGGTAGCCCCCAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGTGTCCCGCTCGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp GATGGAGCACAGAGGAGACCTTCTCTGTCAGCCTTCCTCCAACTCTaGGGAGCTAGATCTACAAGAACAGGTAGTAAAGGGGGAAACAAA +
Preference number: 1 (lower is better)
Translates to: DGAQRRPSLSAFLQL*GARSTRTGSKGGNK
Trigger: TTTGTTTCCCCCTTTACTACCTGTTCTTGTAGATCTAGCTCCTCAGAGTTGGAGGAAGGCTGACAGAGAAGGTCTCCTCTGTGCTCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp GATCTGCTTCTCTCCAGCCACTGTCACTCCCAACTCAGACTTTCCTaGCTTGTCTGGAATAAAGAGCAGCACTGTTTGCTTTCAGAAAGG +
Preference number: 1 (lower is better)
Translates to: DLLLSSHCHSQLRLS*LVWNKEQHCLLSER
Trigger: CCTTTCTGAAAGCAAACAGTGCTGCTCTTTATTCCAGACAAGGCAGGAAAGTCTGAGTTGGGAGTGACAGTGGCTGGAGAGAAGCAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp CCATACAGGAGAGCTCCAGTTTCTCCACATCCTCACCAACGCCTGTaGGTGTTCATCTTTTTATTCTGCCACTCTGGTGAGTGTGAGAAT +
Preference number: 1 (lower is better)
Translates to: PYRRAPVSPHPHQRL*VFIFLFCHSGECEN
Trigger: ATTCTCACACTCACCAGAGTGGCAGAATAAAAAGATGAACACTCACAGGCGTTGGTGAGGATGTGGAGAAACTGGAGCTCTCCTGTATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR CCA 90 bp CTTTCTCAAGCTCCACACTGTTCTTGGAAACACTACTGGGCTCCCTaGCTGTGCTGTGGTCTGGTTTTAGGTAATTCAGTAACAAAGCTG +
Preference number: 1 (lower is better)
Translates to: LSQAPHCSWKHYWAP*LCCGLVLGNSVTKL
Trigger: CAGCTTTGTTACTGAATTACCTAAAACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGAGCTTGAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp CCCGGGCAATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTaGACATTTCATAGGGATGATACAATACTTGGGCTTCTGTGTCTG +
Preference number: 1 (lower is better)
Translates to: PGQSVICCVSRNLQF*TFHRDDTILGLLCL
Trigger: CAGACACAGAAGCCCAAGTATTGTATCATCCCTATGAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTGCCCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR TCA 90 bp ACAGTCTACCCCATTTCACTTACAGAGAACTTACGACATCAGAATTaGGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGA +
Preference number: 1 (lower is better)
Translates to: TVYPISLTENLRHQN*VLWPVVKHAHAQGR
Trigger: TCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTCAATTCTGATGTCGTAAGTTCTCTGTAAGTGAAATGGGGTAGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 90 bp GCTGGCATCCGACTCCCCTTTCCTGTGGACGCAGCTGGGAAAAAGTaGAACCTATCTCCAAGAATCATCAACATGAATACACGATTTACA +
Preference number: 1 (lower is better)
Translates to: AGIRLPFPVDAAGKK*NLSPRIINMNTRFT
Trigger: TGTAAATCGTGTATTCATGTTGATGATTCTTGGAGATAGGTTTCACTTTTTCCCAGCTGCGTCCACAGGAAAGGGGAGTCGGATGCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 90 bp TTGTGTTTCACCTTTAAAGGAACTGCCAGACTGTTTCTCAGCGGCTaGTCATTTACATTGCTCCTAGCCATACAGGAGAGCTCCAGTTTC +
Preference number: 1 (lower is better)
Translates to: LCFTFKGTARLFLSG*SFTLLLAIQESSSF
Trigger: GAAACTGGAGCTCTCCTGTATGGCTAGGAGCAATGTAAATGAGCAGCCGCTGAGAAACAGTCTGGCAGTTCCTTTAAAGGTGAAACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR CCA 90 bp TACAGACATTTGTGTACAAGGTTTTGTGAGGACATGTTTTTCTCTTaGGCGACTCCTAGGAGTGGAGCTGCTGGGTCACAGAGTAACTCT +
Preference number: 1 (lower is better)
Translates to: YRHLCTRFCEDMFFS*ATPRSGAAGSQSNS
Trigger: AGAGTTACTCTGTGACCCAGCAGCTCCACTCCTAGGAGTCGCCCAAGAGAAAAACATGTCCTCACAAAACCTTGTACACAAATGTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR CCA 90 bp GCATGCCATTGCTTTTCATGGCTGGCTAATAGTCCATGCAACGGATaGACCACATTTTGTTTACCCATTCATCACTGGACAGCCATGAAG +
Preference number: 1 (lower is better)
Translates to: ACHCFSWLANSPCNG*TTFCLPIHHWTAMK
Trigger: CTTCATGGCTGTCCAGTGATGAATGGGTAAACAAAATGTGGTCCATCCGTTGCATGGACTATTAGCCAGCCATGAAAAGCAATGGCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR TCA 90 bp ACGCAGCTGGGAAAAAGTGAAACCTATCTCCAAGAATCATCAACATaGATACACGATTTACAGGACAAGGGAGTGAGACGGCTGCATCCT +
Preference number: 1 (lower is better)
Translates to: TQLGKSETYLQESST*IHDLQDKGVRRLHP
Trigger: AGGATGCAGCCGTCTCACTCCCTTGTCCTGTAAATCGTGTATTCATGTTGATGATTCTTGGAGATAGGTTTCACTTTTTCCCAGCTGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 90 bp TCTGGACATTTCATAGGGATGATACAATACTTGGGCTTCTGTGTCTaGCTTCTTCCACTGAGTTTCACGATGTTTCCCAGGTCTATCCCT +
Preference number: 1 (lower is better)
Translates to: SGHFIGMIQYLGFCV*LLPLSFTMFPRSIP
Trigger: AGGGATAGACCTGGGAAACATCGTGAAACTCAGTGGAAGAAGCCAGACACAGAAGCCCAAGTATTGTATCATCCCTATGAAATGTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR-3UTR CCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGCCGGCCCTCCACCACTaGGTGTGCCGGCTGCAGCCC +
Preference number: 2 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRPALHH*VCRLQP
Trigger: GGGCTGCAGCCGGCACACCCAGTGGTGGAGGGCCGG...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 90 bp CAGCCCCACGCTGAGAGGGCTGGATGGGAGCCGCGTGTGCACCCATaGCAGGGAAGGTGGCCCACGGCCACCCACCGTGAGTGGCAGCGC +
Preference number: 2 (lower is better)
Translates to: QPHAERAGWEPRVHP*QGRWPTATHREWQR
Trigger: GCGCTGCCACTCACGGTGGGTGGCCGTGGGCCACCTTCCCTGCAATGGGTGCACACGCGGCTCCCATCCAGCCCTCTCAGCGTGGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCCACGGCCACCCACCGTaGGTGGCAGCGCCGGCCCTC +
Preference number: 2 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASHGHPP*VAAPAL
Trigger: GAGGGCCGGCGCTGCCACTCACGGTGGGTGGCCGTG...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGCCAGCATGCAGGTGTTaGGGTCAGGCCCCGGGCCCA +
Preference number: 2 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRPACRC*GQAPGP
Trigger: TGGGCCCGGGGCCTGACCCCAACACCTGCATGCTGG...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGGCTGAGAGGGCTGGATaGGAGCCGCGTGTGCACCCA +
Preference number: 2 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRAERAG*EPRVHP
Trigger: TGGGTGCACACGCGGCTCCCATCCAGCCCTCTCAGC...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGGTGGGAGCCAGGTCTTaGTCCAGCCGGCCAAGAGCA +
Preference number: 2 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRVGARS*SSRPRA
Trigger: TGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCAC...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGGGCTCTGGGTGCTGCTaGCTTCATGCAGGTCATCGG +
Preference number: 2 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRGSGCC*LHAGHR
Trigger: CCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCC...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 90 bp GGCCGTCTGCAGGCACACACACGTCCCTCTGGTGGGAGCCAGGTCTaGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCCACTCTC +
Preference number: 2 (lower is better)
Translates to: GRLQAHTRPSGGSQV*LQPAKSILYTAPTL
Trigger: GAGAGTGGGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCAGAGGGACGTGTGTGTGCCTGCAGACGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCCCGGCCCTCCACCACTaGGTGTGCCGGCTGCAGCCC +
Preference number: 2 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFPALHH*VCRLQP
Trigger: GGGCTGCAGCCGGCACACCCAGTGGTGGAGGGCCGG...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCGCCACCCACCGTGAGTaGCAGCGCCGGCCCTCCACC +
Preference number: 2 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLATHRE*QRRPST
Trigger: GGTGGAGGGCCGGCGCTGCCACTCACGGTGGGTGGC...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCCAGAGGCCACGCCACTaGCTTGCCCTGCACGTTGCA +
Preference number: 2 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASQRPRH*LALHVA
Trigger: TGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTG...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCGCCCATGGGCTGGCCTaGAGTACCTGGTACAGACCC +
Preference number: 2 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASAHGLA*STWYRP
Trigger: GGGTCTGTACCAGGTACTCCAGGCCAGCCCATGGGC...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCCAGGCCCCGGGCCCATaGGCTGGCCTGGAGTACCTG +
Preference number: 2 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFQAPGP*AGLEYL
Trigger: CAGGTACTCCAGGCCAGCCCATGGGCCCGGGGCCTG...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCGATGGGAGCCGCGTGTaGACCCATTGCAGGGAAGGT +
Preference number: 2 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTDGSRV*THCREG
Trigger: ACCTTCCCTGCAATGGGTGCACACGCGGCTCCCATC...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCATGCAGGTCATCGGGTaGGGTGACGGCCGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLMQVIG*GDGRAL
Trigger: CAGCGCCCGGCCGTCACCCCACCCGATGACCTGCAT...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTATGCAGGTCATCGGGTaGGGTGACGGCCGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGMQVIG*GDGRAL
Trigger: CAGCGCCCGGCCGTCACCCCACCCGATGACCTGCAT...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCCCAGCATGCAGGTGTTaGGGTCAGGCCCCGGGCCCA +
Preference number: 2 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFPACRC*GQAPGP
Trigger: TGGGCCCGGGGCCTGACCCCAACACCTGCATGCTGG...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 90 bp GGGGCCCAATGCTCAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTaGCCCTGCACGTTGCACAGATCTGCTTCTCTCCAGCCACTGTCA +
Preference number: 2 (lower is better)
Translates to: GAQCSALRGRGHATG*PCTLHRSASLQPLS
Trigger: TGACAGTGGCTGGAGAGAAGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTGAGCATTGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 90 bp GCTCCCACGGCGGCACCCATCCTTGCGAGCCCATCGGTCACAGGATaGATTCCGTCCCTTTCCTGGAGAGCATGTGATACCCAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: APTAAPILASPSVTG*IPSLSWRACDTQAQ
Trigger: CTGGGCCTGGGTATCACATGCTCTCCAGGAAAGGGACGGAATCAATCCTGTGACCGATGGGCTCGCAAGGATGGGTGCCGCCGTGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCAGCTCCCGGGCCGTCTaGAGGCACACACACGTCCCT +
Preference number: 2 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLSSRAV*RHTHVP
Trigger: AGGGACGTGTGTGTGCCTGCAGACGGCCCGGGAGCT...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCAGGTGGCCCTGGGTGTaGCCCTGGTGTGACACCTCC +
Preference number: 2 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFRWPWV*PWCDTS
Trigger: GGAGGTGTCACACCAGGGGCACACCCAGGGCCACCT...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCAGGAGAGCAGTGCCCTaGAGCCGTGGCTGGACGCTG +
Preference number: 2 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLRRAVP*SRGWTL
Trigger: CAGCGTCCAGCCACGGCTCCAGGGCACTGCTCTCCT...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCTTCTCCAAGCAACCCTaGCCAGAGCCACTGTCAGCC +
Preference number: 2 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASFSKQP*PEPLSA
Trigger: GGCTGACAGTGGCTCTGGCCAGGGTTGCTTGGAGAA...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATCACGGCCACCCACCGTaGGTGGCAGCGCCGGCCCTC +
Preference number: 2 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYHGHPP*VAAPAL
Trigger: GAGGGCCGGCGCTGCCACTCACGGTGGGTGGCCGTG...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTCCCGTTGGGGCCCAATaGTGGGGGAAGGGTCACCCC +
Preference number: 2 (lower is better)
Translates to: STLFLETLLGSLAVLWSGPVGAQ*WGKGHP
Trigger: GGGGTGACCCTTCCCCCATCATTGGGCCCCAACGGG...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATAGGAGTGGCTCTGGGTaGTGCTGGCTTCATGCAGGT +
Preference number: 2 (lower is better)
Translates to: QRLEAEATPLACPARCTDRSGSG*CWLHAG
Trigger: ACCTGCATGAAGCCAGCAGCACCCAGAGCCACTCCT...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCGCGTGTGCACCCATTaGAGGGAAGGTGGCCCACGG +
Preference number: 2 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWRVCTH*REGGPR
Trigger: CCGTGGGCCACCTTCCCTGCAATGGGTGCACACGCG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCCGGACACCTCGGCACTaGTGTGACTCTGGCGGAGAC +
Preference number: 2 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLRTPRH*CDSGGD
Trigger: GTCTCCGCCAGAGTCACAGCAGTGCCGAGGTGTCCG...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGACGGTCTGTGTGGTCTaGCGCGGACACCTCGGCACT +
Preference number: 2 (lower is better)
Translates to: QCPRTVKQKALDPACRCWTVCVV*RGHLGT
Trigger: AGTGCCGAGGTGTCCGCGGCAGACCACACAGACCGT...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCACAAGGAGGAGAGCAGTaGCCTGGAGCCGTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPAQGGEQ*PGAVAG
Trigger: TCCAGCCACGGCTCCAGGGCACTGCTCTCCTCCTTG...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCTCCTTCCAGAGGCTGTaGACAAGCTCTCCAGCGTTC +
Preference number: 2 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASSFQRL*TSSPAF
Trigger: GAACGCTGGAGAGCTTGTGCACAGCCTCTGGAAGGA...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGCTGGGCCCGGGAGAATaGCACATGGCCTCAGTCCTC +
Preference number: 2 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRLGPGE*HMASVL
Trigger: GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGCAGAGGCCACGCCACTaGCTTGCCCTGCACGTTGCA +
Preference number: 2 (lower is better)
Translates to: QCPRTVKQKALDPACRCWQRPRH*LALHVA
Trigger: TGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTG...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCAAGCACACTGGCAGCATaGTCACGGTCTGGCCAGCGG +
Preference number: 2 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPASTLAA*SRSGQR
Trigger: CCGCTGGCCAGACCGTGACCATGCTGCCAGTGTGCT...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCCCTGGAGCCGTGGCTaGACGCTGCAGGAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWPWSRG*TLQEVC
Trigger: ACACACCTCCTGCAGCGTCCAGCCACGGCTCCAGGG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCACCCCCAGCCCCTGTaGGAGCGCTGTCCCACTGAA +
Preference number: 2 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWHPQPL*ERCPTE
Trigger: TTCAGTGGGACAGCGCTCCCACAGGGGCTGGGGGTG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 90 bp TCAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTaGCACAGATCTGCTTCTCTCCAGCCACTGTCACTCCCAACTCAG +
Preference number: 2 (lower is better)
Translates to: SALRGRGHATGLPCT*HRSASLQPLSLPTQ
Trigger: CTGAGTTGGGAGTGACAGTGGCTGGAGAGAAGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCGCCACAGCCCCACGCTaGGAGGGCTGGATGGGAGCC +
Preference number: 2 (lower is better)
Translates to: APDTHSVIQPICSTDCCLATAPR*EGWMGA
Trigger: GGCTCCCATCCAGCCCTCTCAGCGTGGGGCTGTGGC...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCAACCTCGGCACTGCTGTaGCTCTGGCGGAGACACACA +
Preference number: 2 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPATSALL*LWRRHT
Trigger: TGTGTGTCTCCGCCAGAGTCACAGCAGTGCCGAGGT...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCCACGCAGGGACCTTTaGGCAGTGTGGCTGGGTCTG +
Preference number: 2 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWPRRDL*AVWLGL
Trigger: CAGACCCAGCCACACTGCTCAAAGGTCCCTGCGTGG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTTGGCCTCAGTCCTCCTaGGGAGTGCGACCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: STLFLETLLGSLAVLWSGWPQSS*GVRPLG
Trigger: CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCA...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTACTGGGTGTGCCGGCTaGAGCCCCACCTCATGGCTG +
Preference number: 2 (lower is better)
Translates to: STLFLETLLGSLAVLWSGTGCAG*SPTSWL
Trigger: CAGCCATGAGGTGGGGCTGCAGCCGGCACACCCAGT...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCAGTCACTTCCTGTTCCTaGCCCACAGCGGGAGACTGG +
Preference number: 2 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPAVTSCS*PTAGDW
Trigger: CCAGTCTCCCGCTGTGGGGCAGGAACAGGAAGTGAC...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCGTCACTTCCTGTTCCTaGCCCACAGCGGGAGACTGG +
Preference number: 2 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLVTSCS*PTAGDW
Trigger: CCAGTCTCCCGCTGTGGGGCAGGAACAGGAAGTGAC...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACAGCCCAGCTCATGCCTaGTCTGCCCAGGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDSPAHA*SAQVLG
Trigger: CCCCAGGACCTGGGCAGAGCAGGCATGAGCTGGGCT...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCCGGGAGAATGGCACATaGCCTCAGTCCTCCTGCGGA +
Preference number: 2 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLRENGT*PQSSCG
Trigger: TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCG...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCGTGACGGCCGGGCGCTaGGCCCGGGAGAATGGCACA +
Preference number: 2 (lower is better)
Translates to: APDTHSVIQPICSTDCCLVTAGR*ARENGT
Trigger: TGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCGGCTCTGGGTGCTGCTaGCTTCATGCAGGTCATCGG +
Preference number: 2 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLGSGCC*LHAGHR
Trigger: CCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCC...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTACCCTCGCCAGCCCTTaGCCCACGATGGCCCATGGA +
Preference number: 2 (lower is better)
Translates to: STLFLETLLGSLAVLWSGTLASP*PTMAHG
Trigger: TCCATGGGCCATCGTGGGCCAAGGGCTGGCGAGGGT...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCAGTCTCTGCAGAGGCTaGAGGAGCTACAAAGGTCTG +
Preference number: 2 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASSLCRG*RSYKGL
Trigger: CAGACCTTTGTAGCTCCTCCAGCCTCTGCAGAGACT...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCGCCTTCCTCCAACTCTaGGGAGCTAGATCTACAAGA +
Preference number: 2 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASAFLQL*GARSTR
Trigger: TCTTGTAGATCTAGCTCCTCAGAGTTGGAGGAAGGC...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGTGTGGCTGCGGAAACTaGGGAGGGACCAGCCTCAGA +
Preference number: 2 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWCGCGN*GGTSLR
Trigger: TCTGAGGCTGGTCCCTCCTCAGTTTCCGCAGCCACA...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACAACTGGGTGTGCCGGCTaGAGCCCCACCTCATGGCTG +
Preference number: 2 (lower is better)
Translates to: AEQPREKRISQLQPSFLTTGCAG*SPTSWL
Trigger: CAGCCATGAGGTGGGGCTGCAGCCGGCACACCCAGT...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACAAGCTCCCGGGCCGTCTaGAGGCACACACACGTCCCT +
Preference number: 2 (lower is better)
Translates to: AEQPREKRISQLQPSFLTSSRAV*RHTHVP
Trigger: AGGGACGTGTGTGTGCCTGCAGACGGCCCGGGAGCT...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTCGGACACCTCGGCACTaGTGTGACTCTGGCGGAGAC +
Preference number: 2 (lower is better)
Translates to: STLFLETLLGSLAVLWSGRTPRH*CDSGGD
Trigger: GTCTCCGCCAGAGTCACAGCAGTGCCGAGGTGTCCG...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCGCCACTGGCTTGCCCTaGACGTTGCACAGATCTGCT +
Preference number: 2 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLATGLP*TLHRSA
Trigger: AGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGC...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCATCCAGAGCCACTGCCTaGTCTGCTCACAGCACAAGG +
Preference number: 2 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPASRATA*SAHSTR
Trigger: CCTTGTGCTGTGAGCAGAGCAGGCAGTGGCTCTGGA...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACAAGCCCAGCTCATGCCTaGTCTGCCCAGGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: AEQPREKRISQLQPSFLTSPAHA*SAQVLG
Trigger: CCCCAGGACCTGGGCAGAGCAGGCATGAGCTGGGCT...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTGTGGCTGGGTCTGCTTaGTCTGCACCACAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: STLFLETLLGSLAVLWSGVAGSA*SAPQPS
Trigger: GCTGGGCTGTGGTGCAGAGCAAGCAGACCCAGCCAC...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTGGGCCACTGCCACCCTaGGAGCATCCCTTCCTCTGC +
Preference number: 2 (lower is better)
Translates to: VPESADKVGSWVLPKSYCGPLPP*EHPFLC
Trigger: GCAGAGGAAGGGATGCTCGCAGGGTGGCAGTGGCCC...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTGCCCACGATGGCCCATaGAGTCCTTCCCCTCCTCCC +
Preference number: 2 (lower is better)
Translates to: VPESADKVGSWVLPKSYCAHDGP*SPSPPP
Trigger: GGGAGGAGGGGAAGGACTCCATGGGCCATCGTGGGC...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGACACACACGTCCCTCTaGTGGGAGCCAGGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: QCPRTVKQKALDPACRCWTHTSL*WEPGLA
Trigger: AGCAAGACCTGGCTCCCACCAGAGGGACGTGTGTGT...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTCCCTGGAGCCGTGGCTaGACGCTGCAGGAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: VPESADKVGSWVLPKSYCPWSRG*TLQEVC
Trigger: ACACACCTCCTGCAGCGTCCAGCCACGGCTCCAGGG...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCACTCCGGCATCCTGTGTaGATGGAGCACAGAGGAGAC +
Preference number: 2 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPALRHPV*MEHRGD
Trigger: GTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAG...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTGGTTCCTGGGGTGCGTaGCCTGTGTGGCTCCGGGAA +
Preference number: 2 (lower is better)
Translates to: VPESADKVGSWVLPKSYCGSWGA*PVWLRE
Trigger: TTCCCGGAGCCACACAGGCCACGCACCCCAGGAACC...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGAGTGTCCACGCACGGTaGAACAGAAGGCTCTGGACC +
Preference number: 2 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWSVHAR*NRRLWT
Trigger: GGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACT...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCAGCTCCCGGGCCGTCTaGAGGCACACACACGTCCCT +
Preference number: 2 (lower is better)
Translates to: APDTHSVIQPICSTDCCLSSRAV*RHTHVP
Trigger: AGGGACGTGTGTGTGCCTGCAGACGGCCCGGGAGCT...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTGCCACGCCACTGGCTTaGCCTGCACGTTGCACAGAT +
Preference number: 2 (lower is better)
Translates to: STLFLETLLGSLAVLWSGATPLA*PARCTD
Trigger: ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGC...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCAGATTCGGTGGAGACATaGCCGTTGGGGCCCAATGAT +
Preference number: 2 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPADSVET*PLGPND
Trigger: ATCATTGGGCCCCAACGGGCATGTCTCCACCGAATC...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTCTGGGCCCGGGAGAATaGCACATGGCCTCAGTCCTC +
Preference number: 2 (lower is better)
Translates to: VPESADKVGSWVLPKSYCLGPGE*HMASVL
Trigger: GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACAAGCACACTGGCAGCATaGTCACGGTCTGGCCAGCGG +
Preference number: 2 (lower is better)
Translates to: AEQPREKRISQLQPSFLTSTLAA*SRSGQR
Trigger: CCGCTGGCCAGACCGTGACCATGCTGCCAGTGTGCT...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCAGGCATCCTGTGTGGATaGAGCACAGAGGAGACCTTC +
Preference number: 2 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPAGILCG*STEETF
Trigger: GAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCC...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCTTCCGGGCCAGTGTTaGCCGCAGGAGAACAGTCTT +
Preference number: 2 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWLPGQC*PQENSL
Trigger: AAGACTGTTCTCCTGCGGCCAACACTGGCCCGGAAG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTCCCACTGAAATCCCGTaGCCACGTGCATCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: VPESADKVGSWVLPKSYCPTEIP*PRASPG
Trigger: GCCTGGGGATGCACGTGGCCACGGGATTTCAGTGGG...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 90 bp GCCAGTGTTGGCCGCAGGAGAACAGTCTTGATGTGCTTCTTCCATTaGGTGTCTCAGGCACCAACACATTCCTGTTCCTGGCCCGCGGCA +
Preference number: 2 (lower is better)
Translates to: ASVGRRRTVLMCFFH*VSQAPTHSCSWPAA
Trigger: TGCCGCGGGCCAGGAACAGGAATGTGTTGGTGCCTGAGACACCAAATGGAAGAAGCACATCAAGACTGTTCTCCTGCGGCCAACACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 90 bp ATGGAGGGCGGCTTCCGGGCCAGTGTTGGCCGCAGGAGAACAGTCTaGATGTGCTTCTTCCATTTGGTGTCTCAGGCACCAACACATTCC +
Preference number: 2 (lower is better)
Translates to: MEGGFRASVGRRRTV*MCFFHLVSQAPTHS
Trigger: GGAATGTGTTGGTGCCTGAGACACCAAATGGAAGAAGCACATCAAGACTGTTCTCCTGCGGCCAACACTGGCCCGGAAGCCGCCCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTCCCTTGAGTGTGGCCTaGGTTTCACCGGTGCAAGGA +
Preference number: 2 (lower is better)
Translates to: STLFLETLLGSLAVLWSGPLSVA*VSPVQG
Trigger: TCCTTGCACCGGTGAAACTCAGGCCACACTCAAGGG...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACCCCTTGAGTGTGGCCTaGGTTTCACCGGTGCAAGGA +
Preference number: 2 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDPLSVA*VSPVQG
Trigger: TCCTTGCACCGGTGAAACTCAGGCCACACTCAAGGG...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp ACAAGGTTTTGTGAGGACATGTTTTTCTCTTGGGCGACTCCTAGGAGTGGAGCTCCGTCAGTAAGAGGGTaGCGGGAAGCCGCGGGCTCG +
Preference number: 2 (lower is better)
Translates to: TRFCEDMFFSWATPRSGAPSVRG*REAAGS
Trigger: CGAGCCCGCGGCTTCCCGTCACCCTCTTACTGACGG...AGCTCCACTCCTAGGAGTCGCCCAAGAGAAAAACATGTCCTCACAAAACCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR-3UTR GCA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCATTCCCAGGCAGTAAGTaGGAGGTGAAGGGAGTCTCT +
Preference number: 2 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPAFPGSK*EVKGVS
Trigger: AGAGACTCCCTTCACCTCGCACTTACTGCCTGGGAA...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTGGCTCCGGGAAGCCCTaGTCTGTCTGTGGTCTTAGC +
Preference number: 2 (lower is better)
Translates to: VPESADKVGSWVLPKSYCGSGKP*SVCGLS
Trigger: GCTAAGACCACAGACAGAGCAGGGCTTCCCGGAGCC...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGCCGGCCCTCCACCACTaGGTGTGCCGGCTGCAGCCC +
Preference number: 2 (lower is better)
Translates to: TRLQKCNREDTGVTARHLPALHH*VCRLQP
Trigger: GGGCTGCAGCCGGCACACCCAGTGGTGGAGGGCCGG...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGATGGTTCAGCAGAAGTaGATGGCTCAGTGGGACTGG +
Preference number: 2 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWMVQQK*MAQWDW
Trigger: CCAGTCCCACTGAGCCATTCACTTCTGCTGAACCAT...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTGCCACTGGCTTGCCCTaGACGTTGCACAGATCTGCT +
Preference number: 2 (lower is better)
Translates to: VPESADKVGSWVLPKSYCATGLP*TLHRSA
Trigger: AGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGC...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACGCCGTGGCTGGACGCTaGAGGAGGTGTGTATTATCT +
Preference number: 2 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDAVAGR*RRCVLS
Trigger: AGATAATACACACCTCCTGCAGCGTCCAGCCACGGC...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATTGCAGCCCCACCTCATaGCTGTCCTGCCTGCATCCC +
Preference number: 2 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYCSPTS*LSCLHP
Trigger: GGGATGCAGGCAGGACAGCCATGAGGTGGGGCTGCA...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTACTCCTCAGCATTACTaGGCTGGGAGGAGTGAGCGA +
Preference number: 2 (lower is better)
Translates to: STLFLETLLGSLAVLWSGTPQHY*AGRSER
Trigger: TCGCTCACTCCTCCCAGCCCAGTAATGCTGAGGAGT...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCTCCAAATGCATCAGATaGCACCACGTTTCAGATAAT +
Preference number: 2 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASSKCIR*HHVSDN
Trigger: ATTATCTGAAACGTGGTGTCATCTGATGCATTTGGA...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACAAGTGGCTCTGGGTGCTaGTGGCTTCATGCAGGTCAT +
Preference number: 2 (lower is better)
Translates to: AEQPREKRISQLQPSFLTSGSGC*WLHAGH
Trigger: ATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACT...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATCCGGCTCCCCCGTTCTaGAGTCTGGCAGCATATGGT +
Preference number: 2 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYPAPPF*SLAAYG
Trigger: ACCATATGCTGCCAGACTGCAGAACGGGGGAGCCGG...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTTGGTTTTGGGCATTCTaGCTGCTGGGACTGGGAACC +
Preference number: 2 (lower is better)
Translates to: VPESADKVGSWVLPKSYCWFWAF*LLGLGT
Trigger: GGTTCCCAGTCCCAGCAGGCAGAATGCCCAAAACCA...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp AAACTTTCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCACCAGCATGCAGGTGTTaGGGTCAGGCCCCGGGCCCA +
Preference number: 2 (lower is better)
Translates to: KLSYKNPVHTGVSPVGTAPACRC*GQAPGP
Trigger: TGGGCCCGGGGCCTGACCCCAACACCTGCATGCTGG...TGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGAAAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACAGGCATCCTGTGTGGATaGAGCACAGAGGAGACCTTC +
Preference number: 2 (lower is better)
Translates to: AEQPREKRISQLQPSFLTGILCG*STEETF
Trigger: GAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCC...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACAGAGAGGAAACCTTGGTaGCAGGTGGTAAGCCCTGTC +
Preference number: 2 (lower is better)
Translates to: AEQPREKRISQLQPSFLTERKPW*QVVSPV
Trigger: GACAGGGCTTACCACCTGCCACCAAGGTTTCCTCTC...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTTCGTGCTCCTGGTTTTaGGCATTCTGCCTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: VPESADKVGSWVLPKSYCSCSWF*AFCLLG
Trigger: TCCCAGCAGGCAGAATGCCCAAAACCAGGAGCACGA...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTTGTAGCTTCCAGCCCTaGCTTCCAGCTAAGGAACCC +
Preference number: 2 (lower is better)
Translates to: VPESADKVGSWVLPKSYCCSFQP*LPAKEP
Trigger: GGGTTCCTTAGCTGGAAGCCAGGGCTGGAAGCTACA...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 90 bp GAGCTTTTCACTTGTGTGAGTTGTTTGCATTTTGGTTCACTAGGATaGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCAATGGCC +
Preference number: 2 (lower is better)
Translates to: ELFTCVSCLHFGSLG*AQPSRSGGRVPAMA
Trigger: GGCCATTGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAAATGCAAACAACTCACACAAGTGAAAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAACTGGGCTGGGAGGAGTaGGCGAGAGGCCTGTTTGGT +
Preference number: 2 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAELGWEE*ARGLFG
Trigger: ACCAAACAGGCCTCTCGCTCACTCCTCCCAGCCCAG...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTCATCGGTCACAGGATTaGTTCCGTCCCTTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: VPESADKVGSWVLPKSYCHRSQD*FRPFPG
Trigger: TCCAGGAAAGGGACGGAATCAATCCTGTGACCGATG...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTGTGCTGCTGGCTTCATaGAGGTCATCGGGTGGGGTG +
Preference number: 2 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSAVLLAS*RSSGGV
Trigger: CACCCCACCCGATGACCTGCATGAAGCCAGCAGCAC...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp AAACTTTCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCACGCGTGTGCACCCATTaGAGGGAAGGTGGCCCACGG +
Preference number: 2 (lower is better)
Translates to: KLSYKNPVHTGVSPVGTARVCTH*REGGPR
Trigger: CCGTGGGCCACCTTCCCTGCAATGGGTGCACACGCG...TGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGAAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCCGGACACCTCGGCACTaGTGTGACTCTGGCGGAGAC +
Preference number: 2 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSRTPRH*CDSGGD
Trigger: GTCTCCGCCAGAGTCACAGCAGTGCCGAGGTGTCCG...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACCTTTCCTGTGCTTCTTaGGAGGGACACACAGCACAA +
Preference number: 2 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDLSCAS*EGHTAQ
Trigger: TTGTGCTGTGTGTCCCTCGCAAGAAGCACAGGAAAG...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATGCCACTGGCTTGCCCTaGACGTTGCACAGATCTGCT +
Preference number: 2 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYATGLP*TLHRSA
Trigger: AGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGC...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCGCTCTGGACCCAGCATaGAGGTGTTGGGGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSALDPA*RCWGQA
Trigger: GGCCTGACCCCAACACCTGCATGCTGGGTCCAGAGC...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGAGCCCAGCTCATGCCTaGTCTGCCCAGGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: TRLQKCNREDTGVTARHLSPAHA*SAQVLG
Trigger: CCCCAGGACCTGGGCAGAGCAGGCATGAGCTGGGCT...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGCGGGAGAATGGCACATaGCCTCAGTCCTCCTGCGGA +
Preference number: 2 (lower is better)
Translates to: AACQHVLFSKQGAFHLCERENGT*PQSSCG
Trigger: TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCG...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGACAGCAGGAGTGGCTCTaGGTGCTGCTGGCTTCATGC +
Preference number: 2 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGQQEWL*VLLASC
Trigger: GCATGAAGCCAGCAGCACCCAGAGCCACTCCTGCTG...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAATGCAGCCCCACCTCATaGCTGTCCTGCCTGCATCCC +
Preference number: 2 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQCSPTS*LSCLHP
Trigger: GGGATGCAGGCAGGACAGCCATGAGGTGGGGCTGCA...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATACACACACGTCCCTCTaGTGGGAGCCAGGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYTHTSL*WEPGLA
Trigger: AGCAAGACCTGGCTCCCACCAGAGGGACGTGTGTGT...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGTCTCAGGCGTTTCTGTaGTACTCACAAACAAGACGG +
Preference number: 2 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWSQAFL*YSQTRR
Trigger: CCGTCTTGTTTGTGAGTACCACAGAAACGCCTGAGA...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTGAAGAGAGGAAACCTTaGTGGCAGGTGGTAAGCCCT +
Preference number: 2 (lower is better)
Translates to: VPESADKVGSWVLPKSYCEERKP*WQVVSP
Trigger: AGGGCTTACCACCTGCCACCAAGGTTTCCTCTCTTC...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCCCAATGCGTGTTGCTTaGATTAACCTGAACATCAGG +
Preference number: 2 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFPMRVA*INLNIR
Trigger: CCTGATGTTCAGGTTAATCCAAGCAACACGCATTGG...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTCTCATGTCAGGGGTCTaGAATACCAAGTGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: VPESADKVGSWVLPKSYCLMSGV*NTKCSR
Trigger: CCTGGAGCACTTGGTATTCCAGACCCCTGACATGAG...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGAGCAGTAAGTGCGAGGTaGAGGGAGTCTCTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGAVSAR*RESLQR
Trigger: CCTCTGCAGAGACTCCCTTCACCTCGCACTTACTGC...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTGCGGCATCGCTAGGCTaGGATCACTCATGCACCATG +
Preference number: 2 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSAAASLG*DHSCTM
Trigger: CATGGTGCATGAGTGATCTCAGCCTAGCGATGCCGC...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTCCTGCCTGCATCCCTTaGCCGCCCCCACCCTCGCCA +
Preference number: 2 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVPACIP*PPPPSP
Trigger: TGGCGAGGGTGGGGGCGGGCAAGGGATGCAGGCAGG...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCCAACTCAGACTTTCCTaGCTTGTCTGGAATAAAGAG +
Preference number: 2 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFQLRLS*LVWNKE
Trigger: CTCTTTATTCCAGACAAGGCAGGAAAGTCTGAGTTG...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAAGCCACGCCACTGGCTTaGCCTGCACGTTGCACAGAT +
Preference number: 2 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQATPLA*PARCTD
Trigger: ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGC...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAAGGGGAAGGGGCCCAATaGTCAGCGCTTAGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAEGEGAQ*SALRGR
Trigger: TCTGCCTCTAAGCGCTGAGCATTGGGCCCCTTCCCC...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAAAGCCACTGCCTGCTCTaGTCACAGCACAAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAESHCLL*SQHKGL
Trigger: CAGCCCCTTGTGCTGTGAGCAGAGCAGGCAGTGGCT...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCGGCTCTGGGTGCTGCTaGCTTCATGCAGGTCATCGG +
Preference number: 2 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSGSGCC*LHAGHR
Trigger: CCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCC...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATCTCATCTCACAAGCCTaGCACTCGGGGTACAACTGG +
Preference number: 2 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYLISQA*HSGYNW
Trigger: CCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAG...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAACCCACAGCGGGAGACTaGGGAATAGTGAGGACCAGC +
Preference number: 2 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQPTAGD*GIVRTS
Trigger: GCTGGTCCTCACTATTCCCCAGTCTCCCGCTGTGGG...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTCTCCGGCATCCTGTGTaGATGGAGCACAGAGGAGAC +
Preference number: 2 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSALRHPV*MEHRGD
Trigger: GTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAG...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 90 bp TTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTaGGGGGCTACCAACAAGGTAATGTCTGGATGTGAGCACCGCGAG +
Preference number: 2 (lower is better)
Translates to: LQKCNREDTGVTARH*GATNKVMSGCEHRE
Trigger: CTCGCGGTGCTCACATCCAGACATTACCTTGTTGGTAGCCCCCAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAAAGTGTCCACGCACGGTaGAACAGAAGGCTCTGGACC +
Preference number: 2 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAESVHAR*NRRLWT
Trigger: GGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACT...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGACACAACCCTCGCTCTaGCATTTCTCTAAATGGATT +
Preference number: 2 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWTQPSL*HFSKWI
Trigger: AATCCATTTAGAGAAATGTCAGAGCGAGGGTTGTGT...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTTGGACAGTCAGCCCTTaGGTGTGGCCTGAGTTTCAC +
Preference number: 2 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSAWTVSP*VWPEFH
Trigger: GTGAAACTCAGGCCACACTCAAGGGCTGACTGTCCA...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACATCTCAGGCGTTTCTGTaGTACTCACAAACAAGACGG +
Preference number: 2 (lower is better)
Translates to: AEQPREKRISQLQPSFLTSQAFL*YSQTRR
Trigger: CCGTCTTGTTTGTGAGTACCACAGAAACGCCTGAGA...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATTCTAAATGGATTCGGTaGAGACATGCCCGTTGGGGC +
Preference number: 2 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYSKWIR*RHARWG
Trigger: GCCCCAACGGGCATGTCTCCACCGAATCCATTTAGA...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 90 bp TGCTTCTCTCCAGCCACTGTCACTCCCAACTCAGACTTTCCTGCCTaGTCTGGAATAAAGAGCAGCACTGTTTGCTTTCAGAAAGGGTGG +
Preference number: 2 (lower is better)
Translates to: CFSPATVTPNSDFPA*SGIKSSTVCFQKGW
Trigger: CCACCCTTTCTGAAAGCAAACAGTGCTGCTCTTTATTCCAGACAAGGCAGGAAAGTCTGAGTTGGGAGTGACAGTGGCTGGAGAGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 90 bp CCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTaGTCTCTAGAGAATGTTCCGTCTCTGGAACATTCCAGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: PRHTFCDPTNLQHRL*SLENVPSLEHSREA
Trigger: TGCCTCCCTGGAATGTTCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGAAGACGGGACTTATCTaGCCGCATGTCAGAGGAGGT +
Preference number: 2 (lower is better)
Translates to: AACQHVLFSKQGAFHLCEKTGLI*PHVRGG
Trigger: ACCTCCTCTGACATGCGGTCAGATAAGTCCCGTCTT...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGCCCTTGAGTGTGGCCTaGGTTTCACCGGTGCAAGGA +
Preference number: 2 (lower is better)
Translates to: TRLQKCNREDTGVTARHLPLSVA*VSPVQG
Trigger: TCCTTGCACCGGTGAAACTCAGGCCACACTCAAGGG...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAATGGACAGTCAGCCCTTaGGTGTGGCCTGAGTTTCAC +
Preference number: 2 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAEWTVSP*VWPEFH
Trigger: GTGAAACTCAGGCCACACTCAAGGGCTGACTGTCCA...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCCCACCTCTATTTCATaGGCAAATCATCTAGGATTA +
Preference number: 2 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWPTSIS*ANHLGL
Trigger: TAATCCTAGATGATTTGCTCATGAAATAGAGGTGGG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp ATTTTTAGTGTATTCACAGAGTTGTGCAGCCACCACCATTTCCAGAACATTCTCAGTGATCCCGGGGAGTaGCTGCTGGCCCCGTCAGTA +
Preference number: 2 (lower is better)
Translates to: IFSVFTELCSHHHFQNILSDPGE*LLAPSV
Trigger: TACTGACGGGGCCAGCAGTCACTCCCCGGGATCACT...GAGAATGTTCTGGAAATGGTGGTGGCTGCACAACTCTGTGAATACACTAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR-3UTR GCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAATTTGGGCATTCTGCCTaGTGGGACTGGGAACCTCTC +
Preference number: 2 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAEFGHSA*WDWEPL
Trigger: GAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGATCCCCTTTTTAAAGTaGAAAGTCCCTTATAGCGCT +
Preference number: 2 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWIPFLK*KVPYSA
Trigger: AGCGCTATAAGGGACTTTGCACTTTAAAAAGGGGAT...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GCGACTCCTAGGAGTGGAGCTGCTGGGTCACAGAGTAACTCTTGTGTTTCACCTCTGTTTCTCAGCGGCTaGTCATTTACATTGCTCCTA +
Preference number: 2 (lower is better)
Translates to: ATPRSGAAGSQSNSCVSPLFLSG*SFTLLL
Trigger: TAGGAGCAATGTAAATGAGCAGCCGCTGAGAAACAG...AGGTGAAACACAAGAGTTACTCTGTGACCCAGCAGCTCCACTCCTAGGAGTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR-3UTR CCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAACTCATCTCACAAGCCTaGCACTCGGGGTACAACTGG +
Preference number: 2 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQLISQA*HSGYNW
Trigger: CCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAG...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp AAACTTTCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAACACACACGTCCCTCTaGTGGGAGCCAGGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: KLSYKNPVHTGVSPVGTATHTSL*WEPGLA
Trigger: AGCAAGACCTGGCTCCCACCAGAGGGACGTGTGTGT...TGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGAAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp AAACTTTCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGGAGCTACAAAGGTCTaGTGGGGAAGGGGCCCAATG +
Preference number: 2 (lower is better)
Translates to: KLSYKNPVHTGVSPVGTAGATKV*WGRGPM
Trigger: CATTGGGCCCCTTCCCCACCAGACCTTTGTAGCTCC...TGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGAAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGCCCTGGGTGTGCCCCTaGTGTGACACCTCCCCACGC +
Preference number: 2 (lower is better)
Translates to: LNPMRVAWINLNIRILIWPWVCP*CDTSPR
Trigger: GCGTGGGGAGGTGTCACACCAGGGGCACACCCAGGG...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAATGTAGCTTCCAGCCCTaGCTTCCAGCTAAGGAACCC +
Preference number: 2 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAECSFQP*LPAKEP
Trigger: GGGTTCCTTAGCTGGAAGCCAGGGCTGGAAGCTACA...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACAACACAACCCTCGCTCTaGCATTTCTCTAAATGGATT +
Preference number: 2 (lower is better)
Translates to: AEQPREKRISQLQPSFLTTQPSL*HFSKWI
Trigger: AATCCATTTAGAGAAATGTCAGAGCGAGGGTTGTGT...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGGAGAACGACCTTGAGTaGGAATCTGGCCGTTTCGCC +
Preference number: 2 (lower is better)
Translates to: TRLQKCNREDTGVTARHLENDLE*ESGRFA
Trigger: GGCGAAACGGCCAGATTCTCACTCAAGGTCGTTCTC...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCAAGAATCATCAACATaGATACACGATTTACAGGAC +
Preference number: 2 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWQESST*IHDLQD
Trigger: GTCCTGTAAATCGTGTATTCATGTTGATGATTCTTG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp CCGGGCAATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCTCTGGCTTCTTCCACTaGGTTTCACGATGTTTCCCA +
Preference number: 2 (lower is better)
Translates to: PGNLSSAVSLGICSSGHFSGFFH*VSRCFP
Trigger: TGGGAAACATCGTGAAACTCAGTGGAAGAAGCCAGA...GAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTGCCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR-3UTR GCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGTGGCCTCAGTCCTCCTaGGGAGTGCGACCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: LNPMRVAWINLNIRILIWWPQSS*GVRPLG
Trigger: CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCA...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTCCCAGGCAGTAAGTaGGAGGTGAAGGGAGTCTCT +
Preference number: 2 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSFPGSK*EVKGVS
Trigger: AGAGACTCCCTTCACCTCGCACTTACTGCCTGGGAA...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGCAACGAAGTCAGCGCTaGCTTTCCTTCCAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: TRLQKCNREDTGVTARHLQRSQR*LSFQRL
Trigger: CAGCCTCTGGAAGGAAAGGCAGCGCTGACTTCGTTG...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGCTCATCTCACAAGCCTaGCACTCGGGGTACAACTGG +
Preference number: 2 (lower is better)
Translates to: TRLQKCNREDTGVTARHLLISQA*HSGYNW
Trigger: CCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAG...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTTTTCCTCCCCTGAAATaGCTATTTCAAGAGTCTATG +
Preference number: 2 (lower is better)
Translates to: STLFLETLLGSLAVLWSGFPPLK*LFQESM
Trigger: CATAGACTCTTGAAATAGCCATTTCAGGGGAGGAAA...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAAATGGCTCAGTGGGACTaGAAACGGGACAGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAEMAQWD*KRDRKR
Trigger: CCTTTTCCTGTCCCGTTTCCAGTCCCACTGAGCCAT...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GCAGCCACCACCATTTCCAGAACATTCTCTCACCCCATAAAGAAGCCCCATCCCATTGCTTTTCATGGCTaGCTAATAGTCCATGCAACG +
Preference number: 2 (lower is better)
Translates to: AATTISRTFSHPIKKPHPIAFHG*LIVHAT
Trigger: CGTTGCATGGACTATTAGCCAGCCATGAAAAGCAAT...GGGATGGGGCTTCTTTATGGGGTGAGAGAATGTTCTGGAAATGGTGGTGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR CAA 90 bp TTTAAAGGAACTGCCAGACTGTTTCTCAGCGGCTGCTCATTTACATaGCTCCTAGCCATACAGGAGAGCTCCAGTTTCTCCACATCCTCA +
Preference number: 2 (lower is better)
Translates to: FKGTARLFLSGCSFT*LLAIQESSSFSTSS
Trigger: TGAGGATGTGGAGAAACTGGAGCTCTCCTGTATGGCTAGGAGCAATGTAAATGAGCAGCCGCTGAGAAACAGTCTGGCAGTTCCTTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR-3UTR TCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTCAGACACACATTCTGTaGTCCAACCAATCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSAQTHIL*SNQSAA
Trigger: TGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTG...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATAACACGAATAATGCATaGCTAAGAACGCTGACGACG +
Preference number: 2 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYNTNNA*LRTLTT
Trigger: CGTCGTCAGCGTTCTTAGTCATGCATTATTCGTGTT...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp AGGTTTTGTGAGGACATGTTTTTCTCTTGGGCGACTCCTAGGAGTGGAGCTGCTCCTCACCAACGCCTGTaGGTGTTCATCTTTTTATTC +
Preference number: 2 (lower is better)
Translates to: RFCEDMFFSWATPRSGAAPHQRL*VFIFLF
Trigger: GAATAAAAAGATGAACACTCACAGGCGTTGGTGAGG...AGCAGCTCCACTCCTAGGAGTCGCCCAAGAGAAAAACATGTCCTCACAAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR-3UTR GCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGGCTCTGGACCCAGCATaGAGGTGTTGGGGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: LNPMRVAWINLNIRILIWALDPA*RCWGQA
Trigger: GGCCTGACCCCAACACCTGCATGCTGGGTCCAGAGC...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTAGCTCATGCCTGCTCTaGCCAGGTCCTGGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVSSCLL*PGPGGR
Trigger: TCTTCCCCCAGGACCTGGGCAGAGCAGGCATGAGCT...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAAGAGCATCCCTTCCTCTaGAGAAAGGGACCCTCTAAT +
Preference number: 2 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAEEHPFL*RKGPSN
Trigger: ATTAGAGGGTCCCTTTCTGCAGAGGAAGGGATGCTC...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TTCTCTTGGGCGACTCCTAGGAGTGGAGCTGCTGGGTCACAGAGTAACTCTTGTTTCATCTTTTTATTCTaGCACTCTGGTGAGTGTGAG +
Preference number: 2 (lower is better)
Translates to: FSWATPRSGAAGSQSNSCFIFLF*HSGECE
Trigger: CTCACACTCACCAGAGTGGCAGAATAAAAAGATGAA...ACAAGAGTTACTCTGTGACCCAGCAGCTCCACTCCTAGGAGTCGCCCAAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR-3UTR CCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAAGAGTTCTCTGGCCTGTaGTTAAACATGCGCATGCAC +
Preference number: 2 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAEEFSGL*LNMRMH
Trigger: GTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGAGTCTGCAGATAAAGTaGGGAGCTGGGTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: TRLQKCNREDTGVTARHLSLQIK*GAGFSP
Trigger: TGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACT...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGGTGCTGCTGGCTTCATaGAGGTCATCGGGTGGGGTG +
Preference number: 2 (lower is better)
Translates to: LNPMRVAWINLNIRILIWVLLAS*RSSGGV
Trigger: CACCCCACCCGATGACCTGCATGAAGCCAGCAGCAC...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCGAGGTGTGTATTATCTaGAGTTGGCATCAGAGCGAG +
Preference number: 2 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSEVCII*SWHQSE
Trigger: CTCGCTCTGATGCCAACTGCAGATAATACACACCTC...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACAGAACAAAGTCTGAATaGATTTCAGCTAACACGAAT +
Preference number: 2 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDRTKSE*ISANTN
Trigger: ATTCGTGTTAGCTGAAATGCATTCAGACTTTGTTCT...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTAGAACAAAGTCTGAATaGATTTCAGCTAACACGAAT +
Preference number: 2 (lower is better)
Translates to: STLFLETLLGSLAVLWSGRTKSE*ISANTN
Trigger: ATTCGTGTTAGCTGAAATGCATTCAGACTTTGTTCT...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGCGGGAGAATGGCACATaGCCTCAGTCCTCCTGCGGA +
Preference number: 2 (lower is better)
Translates to: LNPMRVAWINLNIRILIWRENGT*PQSSCG
Trigger: TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCG...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTGGAGCTACAAAGGTCTaGTGGGGAAGGGGCCCAATG +
Preference number: 2 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVGATKV*WGRGPM
Trigger: CATTGGGCCCCTTCCCCACCAGACCTTTGTAGCTCC...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTCTCAGGCGTTTCTGTaGTACTCACAAACAAGACGG +
Preference number: 2 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSSQAFL*YSQTRR
Trigger: CCGTCTTGTTTGTGAGTACCACAGAAACGCCTGAGA...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAATGTATTATCTGCAGTTaGCATCAGAGCGAGGGGTGT +
Preference number: 2 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAECIICS*HQSEGC
Trigger: ACACCCCTCGCTCTGATGCCAACTGCAGATAATACA...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp AATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCATAGGGAGAATTCTGCCATTCTaGTGGGGACAAAGGCAGCTA +
Preference number: 2 (lower is better)
Translates to: NLSSAVSLGICSSGHFIGRILPF*WGQRQL
Trigger: TAGCTGCCTTTGTCCCCATCAGAATGGCAGAATTCT...CCCTATGAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR-3UTR GCA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTCCATGGAGGCTTCTCTaGTTCAGAAGGGAGCTGTCC +
Preference number: 2 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVPWRLL*FRRELS
Trigger: GGACAGCTCCCTTCTGAAGCAGAGAAGCCTCCATGG...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp AATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCATAGGGGGAGCAGCATGCCATTaGTTTTCATGGCTGGCTAAT +
Preference number: 2 (lower is better)
Translates to: NLSSAVSLGICSSGHFIGGAACH*FSWLAN
Trigger: ATTAGCCAGCCATGAAAAGCAATGGCATGCTGCTCC...CCCTATGAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR-3UTR CCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGTGTATTATCTGCAGTTaGCATCAGAGCGAGGGGTGT +
Preference number: 2 (lower is better)
Translates to: TRLQKCNREDTGVTARHLCIICS*HQSEGC
Trigger: ACACCCCTCGCTCTGATGCCAACTGCAGATAATACA...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGTCCTGTGGACGCAGCTaGGAAAAAGTGAAACCTATC +
Preference number: 2 (lower is better)
Translates to: TRLQKCNREDTGVTARHLSCGRS*EKVKPI
Trigger: GATAGGTTTCACTTTTTCCCAGCTGCGTCCACAGGA...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGCCATGGAGGCTTCTCTaGTTCAGAAGGGAGCTGTCC +
Preference number: 2 (lower is better)
Translates to: LNPMRVAWINLNIRILIWPWRLL*FRRELS
Trigger: GGACAGCTCCCTTCTGAAGCAGAGAAGCCTCCATGG...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGTTTGAGCAGTGTGGCTaGGTCTGCTTGCTCTGCACC +
Preference number: 2 (lower is better)
Translates to: LNPMRVAWINLNIRILIWFEQCG*VCLLCT
Trigger: GGTGCAGAGCAAGCAGACCCAGCCACACTGCTCAAA...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 90 bp CTAGGAATCTGCAGTTCTGGACATTTCATAGGGATGATACAATACTaGGGCTTCTGTGTCTGGCTTCTTCCACTGAGTTTCACGATGTTT +
Preference number: 2 (lower is better)
Translates to: LGICSSGHFIGMIQY*GFCVWLLPLSFTMF
Trigger: AAACATCGTGAAACTCAGTGGAAGAAGCCAGACACAGAAGCCCAAGTATTGTATCATCCCTATGAAATGTCCAGAACTGCAGATTCCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR-3UTR TCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGACACAACCCTCGCTCTaGCATTTCTCTAAATGGATT +
Preference number: 2 (lower is better)
Translates to: TRLQKCNREDTGVTARHLTQPSL*HFSKWI
Trigger: AATCCATTTAGAGAAATGTCAGAGCGAGGGTTGTGT...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR TCA 90 bp GGGCAATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCATGTGTACAAGGTTTTGTaGGGACATGTTTTTCTCTTG +
Preference number: 2 (lower is better)
Translates to: GQSVICCVSRNLQFWTFHVYKVL*GHVFLL
Trigger: CAAGAGAAAAACATGTCCTCACAAAACCTTGTACAC...ATGAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR-3UTR CCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGCCCCGTTCTGCAGTCTaGCAGCATATGGTCCAAATG +
Preference number: 2 (lower is better)
Translates to: LNPMRVAWINLNIRILIWPRSAV*QHMVQM
Trigger: CATTTGGACCATATGCTGCCAGACTGCAGAACGGGG...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR GCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGAAGAGCAGCACTGTTTaGTTTCAGAAAGGGTGGTTG +
Preference number: 2 (lower is better)
Translates to: LNPMRVAWINLNIRILIWKSSTV*FQKGWL
Trigger: CAACCACCCTTTCTGAAAGCAAACAGTGCTGCTCTT...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp GGGTGTGCCGGCTGCAGCCCCACCTCATGGCTGTCCTaGCTGCATCCCTTGCCCGCCCCCACCCTCGCCAGC +
Preference number: 3 (lower is better)
Translates to: GCAGCSPTSWLS*LHPLPAPTLAS
Trigger: GCTGGCGAGGGTGGGGGCGGGCAAGGGATGCAGGCAGGACAGCCATGAGGTGGGGCTGCAGCCGGCACACCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp TTGCAGGGAAGGTGGCCCACGGCCACCCACCGTGAGTaGCAGCGCCGGCCCTCCACCACTGGGTGTGCCGGC +
Preference number: 3 (lower is better)
Translates to: LQGRWPTATHRE*QRRPSTTGCAG
Trigger: GCCGGCACACCCAGTGGTGGAGGGCCGGCGCTGCCACTCACGGTGGGTGGCCGTGGGCCACCTTCCCTGCAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp CCCATTGCAGGGAAGGTGGCCCACGGCCACCCACCGTaGGTGGCAGCGCCGGCCCTCCACCACTGGGTGTGC +
Preference number: 3 (lower is better)
Translates to: PIAGKVAHGHPP*VAAPALHHWVC
Trigger: GCACACCCAGTGGTGGAGGGCCGGCGCTGCCACTCACGGTGGGTGGCCGTGGGCCACCTTCCCTGCAATGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATaGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: VTAGRWARENGT*PQSSCGVRPLG
Trigger: CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
3UTR CCA 72 bp GGATGGGAGCCGCGTGTGCACCCATTGCAGGGAAGGTaGCCCACGGCCACCCACCGTGAGTGGCAGCGCCGG +
Preference number: 3 (lower is better)
Translates to: GWEPRVHPLQGR*PTATHREWQRR
Trigger: CCGGCGCTGCCACTCACGGTGGGTGGCCGTGGGCCACCTTCCCTGCAATGGGTGCACACGCGGCTCCCATCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp GGGCAGCAGGAGTGGCTCTGGGTGCTGCTGGCTTCATaGAGGTCATCGGGTGGGGTGACGGCCGGGCGCTGG +
Preference number: 3 (lower is better)
Translates to: GQQEWLWVLLAS*RSSGGVTAGRW
Trigger: CCAGCGCCCGGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTCCTGCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp AGCCCCACGCTGAGAGGGCTGGATGGGAGCCGCGTGTaGACCCATTGCAGGGAAGGTGGCCCACGGCCACCC +
Preference number: 3 (lower is better)
Translates to: SPTLRGLDGSRV*THCREGGPRPP
Trigger: GGGTGGCCGTGGGCCACCTTCCCTGCAATGGGTGCACACGCGGCTCCCATCCAGCCCTCTCAGCGTGGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGGGTGGGAGCCAGGTCTaGCTCCAGCCGGCCAAGAGC +
Preference number: 3 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRGGSQV*LQPAKS
Trigger: GCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACC...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp TCATGCAGGTCATCGGGTGGGGTGACGGCCGGGCGCTaGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCC +
Preference number: 3 (lower is better)
Translates to: SCRSSGGVTAGR*ARENGTWPQSS
Trigger: GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCACCCGATGACCTGCATGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp GCTCCCGGGCCGTCTGCAGGCACACACACGTCCCTCTaGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAG +
Preference number: 3 (lower is better)
Translates to: APGPSAGTHTSL*WEPGLAPAGQE
Trigger: CTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCAGAGGGACGTGTGTGTGCCTGCAGACGGCCCGGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp TTCCTGGCCCGCGGCAGCAAGGGTTCCTGGGGTGCGTaGCCTGTGTGGCTCCGGGAAGCCCTGCTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: FLARGSKGSWGA*PVWLREALLCL
Trigger: CAGACAGAGCAGGGCTTCCCGGAGCCACACAGGCCACGCACCCCAGGAACCCTTGCTGCCGCGGGCCAGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp CTGAGAGGGCTGGATGGGAGCCGCGTGTGCACCCATTaGAGGGAAGGTGGCCCACGGCCACCCACCGTGAGT +
Preference number: 3 (lower is better)
Translates to: LRGLDGSRVCTH*REGGPRPPTVS
Trigger: ACTCACGGTGGGTGGCCGTGGGCCACCTTCCCTGCAATGGGTGCACACGCGGCTCCCATCCAGCCCTCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp GACGGTCTGTGTGGTCTGCCGCGGACACCTCGGCACTaGTGTGACTCTGGCGGAGACACACAGCTCCCGGGC +
Preference number: 3 (lower is better)
Translates to: DGLCGLPRTPRH*CDSGGDTQLPG
Trigger: GCCCGGGAGCTGTGTGTCTCCGCCAGAGTCACAGCAGTGCCGAGGTGTCCGCGGCAGACCACACAGACCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp CGCCAGGCGGGCGCATTTCAGACGGTCTGTGTGGTCTaGCGCGGACACCTCGGCACTGCTGTGACTCTGGCG +
Preference number: 3 (lower is better)
Translates to: RQAGAFQTVCVV*RGHLGTAVTLA
Trigger: CGCCAGAGTCACAGCAGTGCCGAGGTGTCCGCGGCAGACCACACAGACCGTCTGAAATGCGCCCGCCTGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp CCTGGGGTGCGTGGCCTGTGTGGCTCCGGGAAGCCCTaGTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: PGVRGLCGSGKP*SVCGLSLCEPG
Trigger: GCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCAGGGCTTCCCGGAGCCACACAGGCCACGCACCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp GAGGACCAGCCACAGCCCCACGCTGAGAGGGCTGGATaGGAGCCGCGTGTGCACCCATTGCAGGGAAGGTGG +
Preference number: 3 (lower is better)
Translates to: EDQPQPHAERAG*EPRVHPLQGRW
Trigger: CCACCTTCCCTGCAATGGGTGCACACGCGGCTCCCATCCAGCCCTCTCAGCGTGGGGCTGTGGCTGGTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp TCAGAGGAGGTAGCCAGGAAGGGCGGGAGGGGAGGATaGCAGGAGGAGGGAGAGCCCCGCGGGCCTATTTCG +
Preference number: 3 (lower is better)
Translates to: SEEVARKGGRGG*QEEGEPRGPIS
Trigger: CGAAATAGGCCCGCGGGGCTCTCCCTCCTCCTGCCATCCTCCCCTCCCGCCCTTCCTGGCTACCTCCTCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp ACATTCCTGTTCCTGGCCCGCGGCAGCAAGGGTTCCTaGGGTGCGTGGCCTGTGTGGCTCCGGGAAGCCCTG +
Preference number: 3 (lower is better)
Translates to: TFLFLARGSKGS*GAWPVWLREAL
Trigger: CAGGGCTTCCCGGAGCCACACAGGCCACGCACCCCAGGAACCCTTGCTGCCGCGGGCCAGGAACAGGAATGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp TCTGTGTGGTCTGCCGCGGACACCTCGGCACTGCTGTaGCTCTGGCGGAGACACACAGCTCCCGGGCCGTCT +
Preference number: 3 (lower is better)
Translates to: SVWSAADTSALL*LWRRHTAPGPS
Trigger: AGACGGCCCGGGAGCTGTGTGTCTCCGCCAGAGTCACAGCAGTGCCGAGGTGTCCGCGGCAGACCACACAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp CCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATaGAGGTGTTGGGGTCAGGCCCCGGGCCCATGGGCT +
Preference number: 3 (lower is better)
Translates to: PRTVKQKALDPA*RCWGQAPGPWA
Trigger: AGCCCATGGGCCCGGGGCCTGACCCCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp GGTGTTGGGGTCAGGCCCCGGGCCCATGGGCTGGCCTaGAGTACCTGGTACAGACCCACAGAAGAGAAGGGC +
Preference number: 3 (lower is better)
Translates to: GVGVRPRAHGLA*STWYRPTEEKG
Trigger: GCCCTTCTCTTCTGTGGGTCTGTACCAGGTACTCCAGGCCAGCCCATGGGCCCGGGGCCTGACCCCAACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp GTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTaGCATCCGACTCCCCTTTCCTGTGGACGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: VVLACASQAGCS*HPTPLSCGRSW
Trigger: CCAGCTGCGTCCACAGGAAAGGGGAGTCGGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp CTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTaGAGCTGGCATCCGACTCCCCTTTCCTGTGGACGC +
Preference number: 3 (lower is better)
Translates to: LSVVLACASQAG*SWHPTPLSCGR
Trigger: GCGTCCACAGGAAAGGGGAGTCGGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp GGGGACCCCAGGCGGCCTAGCAGTGTCCACGCACGGTaGAACAGAAGGCTCTGGACCCAGCATGCAGGTGTT +
Preference number: 3 (lower is better)
Translates to: GDPRRPSSVHAR*NRRLWTQHAGV
Trigger: AACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTGCTAGGCCGCCTGGGGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp GAGGCGGCTGAAGGGAGCGCCTGGACAGTCAGCCCTTaGGTGTGGCCTGAGTTTCACCGGTGCAAGGAGGAG +
Preference number: 3 (lower is better)
Translates to: EAAEGSAWTVSP*VWPEFHRCKEE
Trigger: CTCCTCCTTGCACCGGTGAAACTCAGGCCACACTCAAGGGCTGACTGTCCAGGCGCTCCCTTCAGCCGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp TGCCCCTGGTGTGACACCTCCCCACGCAGGGACCTTTaGGCAGTGTGGCTGGGTCTGCTTGCTCTGCACCAC +
Preference number: 3 (lower is better)
Translates to: CPWCDTSPRRDL*AVWLGLLALHH
Trigger: GTGGTGCAGAGCAAGCAGACCCAGCCACACTGCTCAAAGGTCCCTGCGTGGGGAGGTGTCACACCAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp AGGCACACACACGTCCCTCTGGTGGGAGCCAGGTCTTaGTCCAGCCGGCCAAGAGCATCCTCTACACCGCAC +
Preference number: 3 (lower is better)
Translates to: RHTHVPLVGARS*SSRPRASSTPH
Trigger: GTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCAGAGGGACGTGTGTGTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp GAGGAGCTACAAAGGTCTGGTGGGGAAGGGGCCCAATaGTCAGCGCTTAGAGGCAGAGGCCACGCCACTGGC +
Preference number: 3 (lower is better)
Translates to: EELQRSGGEGAQ*SALRGRGHATG
Trigger: GCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTGAGCATTGGGCCCCTTCCCCACCAGACCTTTGTAGCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp ATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTaGAATGGCCCCATGGATGACAGGCCTTCGTGCTCC +
Preference number: 3 (lower is better)
Translates to: IGTALKVGRQSA*NGPMDDRPSCS
Trigger: GGAGCACGAAGGCCTGTCATCCATGGGGCCATTGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACCCCAGCATGCAGGTGTaGGGGTCAGGCCCCGGGCCC +
Preference number: 3 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDPSMQV*GSGPGP
Trigger: GGGCCCGGGGCCTGACCCCAACACCTGCATGCTGGG...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCAGGCCACGCCACTGGCTaGCCCTGCACGTTGCACAGA +
Preference number: 3 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPAGHATG*PCTLHR
Trigger: TCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCC...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCGGCGGCACCCATCCTaGCGAGCCCATCGGTCACAG +
Preference number: 3 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWRRHPS*RAHRSQ
Trigger: CTGTGACCGATGGGCTCGCAAGGATGGGTGCCGCCG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp AGCATGGTCACGGTCTGGCCAGCGGCATCGCTAGGCTaGGATCACTCATGCACCATGCAGTCAGGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: SMVTVWPAASLG*DHSCTMQSGAL
Trigger: CAGGGCCCCTGACTGCATGGTGCATGAGTGATCTCAGCCTAGCGATGCCGCTGGCCAGACCGTGACCATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp GAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTaGACAGATCTGCTTCTCTCCAGCCACTGTCACTCC +
Preference number: 3 (lower is better)
Translates to: EAEATPLACPAR*TDLLLSSHCHS
Trigger: GGAGTGACAGTGGCTGGAGAGAAGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp GCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTaGACGTTGCACAGATCTGCTTCTCTCCAGCCACTG +
Preference number: 3 (lower is better)
Translates to: ALRGRGHATGLP*TLHRSASLQPL
Trigger: CAGTGGCTGGAGAGAAGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp GCTCAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTaGCCTGCACGTTGCACAGATCTGCTTCTCTCCAGC +
Preference number: 3 (lower is better)
Translates to: AQRLEAEATPLA*PARCTDLLLSS
Trigger: GCTGGAGAGAAGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTGAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp ACACCTCCCCACGCAGGGACCTTTGAGCAGTGTGGCTaGGTCTGCTTGCTCTGCACCACAGCCCAGCTCATG +
Preference number: 3 (lower is better)
Translates to: TPPHAGTFEQCG*VCLLCTTAQLM
Trigger: CATGAGCTGGGCTGTGGTGCAGAGCAAGCAGACCCAGCCACACTGCTCAAAGGTCCCTGCGTGGGGAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp GGCCCCATGGATGACAGGCCTTCGTGCTCCTGGTTTTaGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCC +
Preference number: 3 (lower is better)
Translates to: GPMDDRPSCSWF*AFCLLGLGTSP
Trigger: GGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAAACCAGGAGCACGAAGGCCTGTCATCCATGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp CATTTGGTGTCTCAGGCACCAACACATTCCTGTTCCTaGCCCGCGGCAGCAAGGGTTCCTGGGGTGCGTGGC +
Preference number: 3 (lower is better)
Translates to: HLVSQAPTHSCS*PAAARVPGVRG
Trigger: GCCACGCACCCCAGGAACCCTTGCTGCCGCGGGCCAGGAACAGGAATGTGTTGGTGCCTGAGACACCAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTCCGCGTGTGCACCCATaGCAGGGAAGGTGGCCCACG +
Preference number: 3 (lower is better)
Translates to: STLFLETLLGSLAVLWSGPRVHP*QGRWPT
Trigger: CGTGGGCCACCTTCCCTGCAATGGGTGCACACGCGG...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCCCCACGCAGGGACCTTaGAGCAGTGTGGCTGGGTCT +
Preference number: 3 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFPTQGP*SSVAGS
Trigger: AGACCCAGCCACACTGCTCAAAGGTCCCTGCGTGGG...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp GAGAATCTGGCCGTTTCGCCTTGTGGCTGCGGAAACTaGGGAGGGACCAGCCTCAGAACACCTGCCTGCTGG +
Preference number: 3 (lower is better)
Translates to: ENLAVSPCGCGN*GGTSLRTPACW
Trigger: CCAGCAGGCAGGTGTTCTGAGGCTGGTCCCTCCTCAGTTTCCGCAGCCACAAGGCGAAACGGCCAGATTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp GGTGCAAGGAGGAGAGCAGTGCCCTGGAGCCGTGGCTaGACGCTGCAGGAGGTGTGTATTATCTGCAGTTGG +
Preference number: 3 (lower is better)
Translates to: GARRRAVPWSRG*TLQEVCIICSW
Trigger: CCAACTGCAGATAATACACACCTCCTGCAGCGTCCAGCCACGGCTCCAGGGCACTGCTCTCCTCCTTGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp GAGGGCCTGTATGGAGGGCGGCTTCCGGGCCAGTGTTaGCCGCAGGAGAACAGTCTTGATGTGCTTCTTCCA +
Preference number: 3 (lower is better)
Translates to: EGLYGGRLPGQC*PQENSLDVLLP
Trigger: TGGAAGAAGCACATCAAGACTGTTCTCCTGCGGCCAACACTGGCCCGGAAGCCGCCCTCCATACAGGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGAAAGAGCAGCACTGTTaGCTTTCAGAAAGGGTGGTT +
Preference number: 3 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRKEQHC*LSERVV
Trigger: AACCACCCTTTCTGAAAGCAAACAGTGCTGCTCTTT...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp CACAGGATTGATTCCGTCCCTTTCCTGGAGAGCATGTaGTACCCAGGCCCAGGGATGCACGGGGGACTGAGG +
Preference number: 3 (lower is better)
Translates to: HRIDSVPFLESM*YPGPGMHGGLR
Trigger: CCTCAGTCCCCCGTGCATCCCTGGGCCTGGGTATCACATGCTCTCCAGGAAAGGGACGGAATCAATCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp CGTTTCCTCCTCAAGGTTCCCGTCACTTCCTGTTCCTaGCCCACAGCGGGAGACTGGGGAATAGTGAGGACC +
Preference number: 3 (lower is better)
Translates to: RFLLKVPVTSCS*PTAGDWGIVRT
Trigger: GGTCCTCACTATTCCCCAGTCTCCCGCTGTGGGGCAGGAACAGGAAGTGACGGGAACCTTGAGGAGGAAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp CCACGCCACTGGCTTGCCCTGCACGTTGCACAGATCTaGTTCTCTCCAGCCACTGTCACTCCCAACTCAGAC +
Preference number: 3 (lower is better)
Translates to: PRHWLALHVAQI*FSPATVTPNSD
Trigger: GTCTGAGTTGGGAGTGACAGTGGCTGGAGAGAAGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp CACAGAAGAGAAGGGCCGTGGTTCCCAGGCAGTAAGTaGGAGGTGAAGGGAGTCTCTGCAGAGGCTGGAGGA +
Preference number: 3 (lower is better)
Translates to: HRREGPWFPGSK*EVKGVSAEAGG
Trigger: TCCTCCAGCCTCTGCAGAGACTCCCTTCACCTCGCACTTACTGCCTGGGAACCACGGCCCTTCTCTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp GGAGGAGAGCAGTGCCCTGGAGCCGTGGCTGGACGCTaGAGGAGGTGTGTATTATCTGCAGTTGGCATCAGA +
Preference number: 3 (lower is better)
Translates to: GGEQCPGAVAGR*RRCVLSAVGIR
Trigger: TCTGATGCCAACTGCAGATAATACACACCTCCTGCAGCGTCCAGCCACGGCTCCAGGGCACTGCTCTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp AGTGCCTGCAATGGCCCCATGGATGACAGGCCTTCGTaGTCCTGGTTTTGGGCATTCTGCCTGCTGGGACTG +
Preference number: 3 (lower is better)
Translates to: SACNGPMDDRPS*SWFWAFCLLGL
Trigger: CAGTCCCAGCAGGCAGAATGCCCAAAACCAGGAGCACGAAGGCCTGTCATCCATGGGGCCATTGCAGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp GCGCCGCGCTCCCAAGGACTCTCACTCACTGCACTCTaGAGGCTAGAGACACCCACACAAACCCAATCCCTT +
Preference number: 3 (lower is better)
Translates to: APRSQGLSLTAL*RLETPTQTQSL
Trigger: AAGGGATTGGGTTTGTGTGGGTGTCTCTAGCCTGCAGAGTGCAGTGAGTGAGAGTCCTTGGGAGCGCGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp CCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTaGAGGGAGATCTGGAGTCCACCCCTTAGGGCTGCA +
Preference number: 3 (lower is better)
Translates to: PPQQPKPSQAVS*REIWSPPLRAA
Trigger: TGCAGCCCTAAGGGGTGGACTCCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp CACCGCGAGTCTAGGAAAGAGAAAGCAGAGGGCGTGTaGATGGGAGACGCCACTGATAGTTCCAACGGGGGC +
Preference number: 3 (lower is better)
Translates to: HRESRKEKAEGV*MGDATDSSNGG
Trigger: GCCCCCGTTGGAACTATCAGTGGCGTCTCCCATGCACACGCCCTCTGCTTTCTCTTTCCTAGACTCGCGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp CACCTCGGCTTTAGCTGTGTGACCCAAGGGACACTTTaGCACATGGATGGGGGTCGCAGACACAGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: HLGFSCVTQGTL*HMDGGRRHRQR
Trigger: CCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCTTGGGTCACACAGCTAAAGCCGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp GGCTGGACGCTGCAGGAGGTGTGTATTATCTGCAGTTaGCATCAGAGCGAGGGGTGTCCACACAACCCTCGC +
Preference number: 3 (lower is better)
Translates to: GWTLQEVCIICS*HQSEGCPHNPR
Trigger: GCGAGGGTTGTGTGGACACCCCTCGCTCTGATGCCAACTGCAGATAATACACACCTCCTGCAGCGTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGACCCAGCATGCAGGTGTaGGGGTCAGGCCCCGGGCCC +
Preference number: 3 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGPSMQV*GSGPGP
Trigger: GGGCCCGGGGCCTGACCCCAACACCTGCATGCTGGG...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTCCCAGCATGCAGGTGTaGGGGTCAGGCCCCGGGCCC +
Preference number: 3 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSAPSMQV*GSGPGP
Trigger: GGGCCCGGGGCCTGACCCCAACACCTGCATGCTGGG...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACGTGGAGACATGCCCGTaGGGGCCCAATGATGGGGGA +
Preference number: 3 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDVETCP*GPNDGG
Trigger: TCCCCCATCATTGGGCCCCAACGGGCATGTCTCCAC...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCGGAAGAGAGGAAACCTaGGTGGCAGGTGGTAAGCCC +
Preference number: 3 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFGREET*VAGGKP
Trigger: GGGCTTACCACCTGCCACCAAGGTTTCCTCTCTTCC...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTGCTTCCGGGCCAGTGTaGGCCGCAGGAGAACAGTCT +
Preference number: 3 (lower is better)
Translates to: VPESADKVGSWVLPKSYCASGPV*AAGEQS
Trigger: AGACTGTTCTCCTGCGGCCAACACTGGCCCGGAAGC...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp CTCGGGGTACAACTGGTCACCTCGGCTTTAGCTGTGTaGCCCAAGGGACACTTTGGCACATGGATGGGGGTC +
Preference number: 3 (lower is better)
Translates to: LGVQLVTSALAV*PKGHFGTWMGV
Trigger: GACCCCCATCCATGTGCCAAAGTGTCCCTTGGGTCACACAGCTAAAGCCGAGGTGACCAGTTGTACCCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp CGGCACCCATCCTTGCGAGCCCATCGGTCACAGGATTaGTTCCGTCCCTTTCCTGGAGAGCATGTGATACCC +
Preference number: 3 (lower is better)
Translates to: RHPSLRAHRSQD*FRPFPGEHVIP
Trigger: GGGTATCACATGCTCTCCAGGAAAGGGACGGAATCAATCCTGTGACCGATGGGCTCGCAAGGATGGGTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp AGCCGTGGCTGGACGCTGCAGGAGGTGTGTATTATCTaGAGTTGGCATCAGAGCGAGGGGTGTCCACACAAC +
Preference number: 3 (lower is better)
Translates to: SRGWTLQEVCII*SWHQSEGCPHN
Trigger: GTTGTGTGGACACCCCTCGCTCTGATGCCAACTGCAGATAATACACACCTCCTGCAGCGTCCAGCCACGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp AGCACAAGGGGCTGTCTCTCCGGCATCCTGTGTGGATaGAGCACAGAGGAGACCTTCTCTGTCAGCCTTCCT +
Preference number: 3 (lower is better)
Translates to: STRGCLSGILCG*STEETFSVSLP
Trigger: AGGAAGGCTGACAGAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp TCACAGCACAAGGGGCTGTCTCTCCGGCATCCTGTGTaGATGGAGCACAGAGGAGACCTTCTCTGTCAGCCT +
Preference number: 3 (lower is better)
Translates to: SQHKGLSLRHPV*MEHRGDLLCQP
Trigger: AGGCTGACAGAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTTGTGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGCCGCGTGTGCACCCATaGCAGGGAAGGTGGCCCACG +
Preference number: 3 (lower is better)
Translates to: AACQHVLFSKQGAFHLCEPRVHP*QGRWPT
Trigger: CGTGGGCCACCTTCCCTGCAATGGGTGCACACGCGG...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCGTGTATTATCTGCAGTaGGCATCAGAGCGAGGGGTG +
Preference number: 3 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFVYYLQ*ASERGV
Trigger: CACCCCTCGCTCTGATGCCAACTGCAGATAATACAC...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp CTTCTTGCGAGGGACACACAGCACAACGCTGCTTCGTaGCCATGGAGGCTTCTCTGCTTCAGAAGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: LLARDTQHNAAS*PWRLLCFRREL
Trigger: CAGCTCCCTTCTGAAGCAGAGAAGCCTCCATGGTCACGAAGCAGCGTTGTGCTGTGTGTCCCTCGCAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp CATTTCTCTAAATGGATTCGGTGGAGACATGCCCGTTaGGGCCCAATGATGGGGGAAGGGTCACCCCAGCCT +
Preference number: 3 (lower is better)
Translates to: HFSKWIRWRHAR*GPMMGEGSPQP
Trigger: AGGCTGGGGTGACCCTTCCCCCATCATTGGGCCCCAACGGGCATGTCTCCACCGAATCCATTTAGAGAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp CGTGCTCCTGGTTTTGGGCATTCTGCCTGCTGGGACTaGGAACCTCTCCCTAGGAAATCACCTGACACTTCC +
Preference number: 3 (lower is better)
Translates to: RAPGFGHSACWD*EPLPRKSPDTS
Trigger: GGAAGTGTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAAACCAGGAGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGTCTTTCCTGTGCTTCTaGCGAGGGACACACAGCACA +
Preference number: 3 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWSFLCF*RGTHST
Trigger: TGTGCTGTGTGTCCCTCGCAAGAAGCACAGGAAAGA...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGGTGTATTATCTGCAGTaGGCATCAGAGCGAGGGGTG +
Preference number: 3 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWVYYLQ*ASERGV
Trigger: CACCCCTCGCTCTGATGCCAACTGCAGATAATACAC...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp CCCGGAGGGAAACCTTCCAAGCAGTGGCCGGGTAAGTaGCTCTCAGGCGTTTCTGTGGTACTCACAAACAAG +
Preference number: 3 (lower is better)
Translates to: PGGKPSKQWPGK*LSGVSVVLTNK
Trigger: CTTGTTTGTGAGTACCACAGAAACGCCTGAGAGTCACTTACCCGGCCACTGCTTGGAAGGTTTCCCTCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp TGGGAACCTCTCCCTAGGAAATCACCTGACACTTCCTaGGTTTACGGAGGGGCCACCAGAGCTCTCCTACAC +
Preference number: 3 (lower is better)
Translates to: WEPLPRKSPDTS*VYGGATRALLH
Trigger: GTGTAGGAGAGCTCTGGTGGCCCCTCCGTAAACTCAGGAAGTGTCAGGTGATTTCCTAGGGAGAGGTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp GCTTCCGGGCCAGTGTTGGCCGCAGGAGAACAGTCTTaGTGTGCTTCTTCCATTTGGTGTCTCAGGCACCAA +
Preference number: 3 (lower is better)
Translates to: ASGPVLAAGEQS*CASSIWCLRHQ
Trigger: TTGGTGCCTGAGACACCAAATGGAAGAAGCACATCAAGACTGTTCTCCTGCGGCCAACACTGGCCCGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp CCAGAGTGCATGCGGTCGTCCCCCACCTCTATTTCATaGGCAAATCATCTAGGATTAAGGAGGGAGCGGGCG +
Preference number: 3 (lower is better)
Translates to: PECMRSSPTSIS*ANHLGLRRERA
Trigger: CGCCCGCTCCCTCCTTAATCCTAGATGATTTGCTCATGAAATAGAGGTGGGGGACGACCGCATGCACTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp TCCTGTGCTTCTTGCGAGGGACACACAGCACAACGCTaGTTCGTGACCATGGAGGCTTCTCTGCTTCAGAAG +
Preference number: 3 (lower is better)
Translates to: SCASCEGHTAQR*FVTMEASLLQK
Trigger: CTTCTGAAGCAGAGAAGCCTCCATGGTCACGAAGCAGCGTTGTGCTGTGTGTCCCTCGCAAGAAGCACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACATTCCCCTCCTCCCTCTaGGTCTCATCTCACAAGCCT +
Preference number: 3 (lower is better)
Translates to: AEQPREKRISQLQPSFLTFPSSL*VSSHKP
Trigger: AGGCTTGTGAGATGAGACCAAGAGGGAGGAGGGGAA...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCTGCAGCACAGACTGTaGTCTCTAGAGAATGTTCCG +
Preference number: 3 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWLQHRL*SLENVP
Trigger: CGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp GTTTCTGTGGTACTCACAAACAAGACGGGACTTATCTaGCCGCATGTCAGAGGAGGTAGCCAGGAAGGGCGG +
Preference number: 3 (lower is better)
Translates to: VSVVLTNKTGLI*PHVRGGSQEGR
Trigger: CCGCCCTTCCTGGCTACCTCCTCTGACATGCGGTCAGATAAGTCCCGTCTTGTTTGTGAGTACCACAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp GCATCAGAGCGAGGGGTGTCCACACAACCCTCGCTCTaGCATTTCTCTAAATGGATTCGGTGGAGACATGCC +
Preference number: 3 (lower is better)
Translates to: ASERGVSTQPSL*HFSKWIRWRHA
Trigger: GGCATGTCTCCACCGAATCCATTTAGAGAAATGTCAGAGCGAGGGTTGTGTGGACACCCCTCGCTCTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp GCGAATCTCACAGCTCCAGCCTTCTTTCCTCACAACTaGACTCCTCAGCATTACTGGGCTGGGAGGAGTGAG +
Preference number: 3 (lower is better)
Translates to: ANLTAPAFFPHN*TPQHYWAGRSE
Trigger: CTCACTCCTCCCAGCCCAGTAATGCTGAGGAGTTCAGTTGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp CGGGCCAGTGTTGGCCGCAGGAGAACAGTCTTGATGTaGTTCTTCCATTTGGTGTCTCAGGCACCAACACAT +
Preference number: 3 (lower is better)
Translates to: RASVGRRRTVLM*FFHLVSQAPTH
Trigger: ATGTGTTGGTGCCTGAGACACCAAATGGAAGAAGCACATCAAGACTGTTCTCCTGCGGCCAACACTGGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp CCCATTCCCCACCCTCTGCCCGGGCAATCTGTCATCTaGTGTGTCTCTAGGAATCTGCAGTTCTGGACATTT +
Preference number: 3 (lower is better)
Translates to: PIPHPLPGQSVI*CVSRNLQFWTF
Trigger: AAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTGCCCGGGCAGAGGGTGGGGAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR-3UTR CAA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGGGCCACGCCACTGGCTaGCCCTGCACGTTGCACAGA +
Preference number: 3 (lower is better)
Translates to: TRLQKCNREDTGVTARHLGHATG*PCTLHR
Trigger: TCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCC...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp CTGCTACAGCGTGGAGCAGCATGCCATTGCTTTTCATaGCTGGCTAATAGTCCATGCAACGGATGGACCACA +
Preference number: 3 (lower is better)
Translates to: LLQRGAACHCFS*LANSPCNGWTT
Trigger: TGTGGTCCATCCGTTGCATGGACTATTAGCCAGCCATGAAAAGCAATGGCATGCTGCTCCACGCTGTAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR-3UTR CAA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGGGAAGAGAGGAAACCTaGGTGGCAGGTGGTAAGCCC +
Preference number: 3 (lower is better)
Translates to: AACQHVLFSKQGAFHLCEGREET*VAGGKP
Trigger: GGGCTTACCACCTGCCACCAAGGTTTCCTCTCTTCC...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATTCTTTCCTGTGCTTCTaGCGAGGGACACACAGCACA +
Preference number: 3 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYSFLCF*RGTHST
Trigger: TGTGCTGTGTGTCCCTCGCAAGAAGCACAGGAAAGA...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp GTGGCTACTAAAGAAACTTCTCTTTCCTGTGCTTCTTaGGAGGGACACACAGCACAACGCTGCTTCGTGACC +
Preference number: 3 (lower is better)
Translates to: VATKETSLSCAS*EGHTAQRCFVT
Trigger: GGTCACGAAGCAGCGTTGTGCTGTGTGTCCCTCGCAAGAAGCACAGGAAAGAGAAGTTTCTTTAGTAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACAAAAGAGCAGCACTGTTaGCTTTCAGAAAGGGTGGTT +
Preference number: 3 (lower is better)
Translates to: AEQPREKRISQLQPSFLTKEQHC*LSERVV
Trigger: AACCACCCTTTCTGAAAGCAAACAGTGCTGCTCTTT...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp CAGAGGAGACCTTCTCTGTCAGCCTTCCTCCAACTCTaGGGAGCTAGATCTACAAGAACAGGTAGTAAAGGG +
Preference number: 3 (lower is better)
Translates to: QRRPSLSAFLQL*GARSTRTGSKG
Trigger: CCCTTTACTACCTGTTCTTGTAGATCTAGCTCCTCAGAGTTGGAGGAAGGCTGACAGAGAAGGTCTCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp GACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAAGTaGATGGCTCAGTGGGACTGGAAACGGGACAGGAAA +
Preference number: 3 (lower is better)
Translates to: DGCILRKMVQQK*MAQWDWKRDRK
Trigger: TTTCCTGTCCCGTTTCCAGTCCCACTGAGCCATTCACTTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp CTCTCCAGCCACTGTCACTCCCAACTCAGACTTTCCTaGCTTGTCTGGAATAAAGAGCAGCACTGTTTGCTT +
Preference number: 3 (lower is better)
Translates to: LSSHCHSQLRLS*LVWNKEQHCLL
Trigger: AAGCAAACAGTGCTGCTCTTTATTCCAGACAAGGCAGGAAAGTCTGAGTTGGGAGTGACAGTGGCTGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp TGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATaGAATCTATTACCACGGCCCCTCTTAGACATCAAT +
Preference number: 3 (lower is better)
Translates to: WPVVKHAHAQGR*NLLPRPLLDIN
Trigger: ATTGATGTCTAAGAGGGGCCGTGGTAATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp TCCACTGAGTTTCACGATGTTTCCCAGGTCTATCCCTaGTACAGCGTGGAGCAGCATGCCATTGCTTTTCAT +
Preference number: 3 (lower is better)
Translates to: STEFHDVSQVYP*YSVEQHAIAFH
Trigger: ATGAAAAGCAATGGCATGCTGCTCCACGCTGTAGCAGGGATAGACCTGGGAAACATCGTGAAACTCAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR CCA 72 bp GCTCCACACTGTTCTTGGAAACACTACTGGGCTCCCTaGCTGTGCTGTGGTCTGGTTTTAGGTAATTCAGTA +
Preference number: 3 (lower is better)
Translates to: APHCSWKHYWAP*LCCGLVLGNSV
Trigger: TACTGAATTACCTAAAACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp AGCTGGCATCCGACTCCCCTTTCCTGTGGACGCAGCTaGGAAAAAGTGAAACCTATCTCCAAGAATCATCAA +
Preference number: 3 (lower is better)
Translates to: SWHPTPLSCGRS*EKVKPISKNHQ
Trigger: TTGATGATTCTTGGAGATAGGTTTCACTTTTTCCCAGCTGCGTCCACAGGAAAGGGGAGTCGGATGCCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp TTGTGTACAAGGTTTTGTGAGGACATGTTTTTCTCTTaGGCGACTCCTAGGAGTGGAGCTGCTGGGTCACAG +
Preference number: 3 (lower is better)
Translates to: LCTRFCEDMFFS*ATPRSGAAGSQ
Trigger: CTGTGACCCAGCAGCTCCACTCCTAGGAGTCGCCCAAGAGAAAAACATGTCCTCACAAAACCTTGTACACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR-3UTR CAA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAAAGCTCCACACTGTTCTaGGAAACACTACTGGGCTCC +
Preference number: 3 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAESSTLF*ETLLGS
Trigger: GGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGAGCT...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp CTGCAGTCTGGCAGCATATGGTCCAAATGCATCAGATaGCACCACGTTTCAGATAATGCCCCAGACACACAT +
Preference number: 3 (lower is better)
Translates to: LQSGSIWSKCIR*HHVSDNAPDTH
Trigger: ATGTGTGTCTGGGGCATTATCTGAAACGTGGTGTCATCTGATGCATTTGGACCATATGCTGCCAGACTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp AGAGCTCCAGTTTCTCCACATCCTCACCAACGCCTGTaGGTGTTCATCTTTTTATTCTGCCACTCTGGTGAG +
Preference number: 3 (lower is better)
Translates to: RAPVSPHPHQRL*VFIFLFCHSGE
Trigger: CTCACCAGAGTGGCAGAATAAAAAGATGAACACTCACAGGCGTTGGTGAGGATGTGGAGAAACTGGAGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR GCA 72 bp ACCTTTAAAGGAACTGCCAGACTGTTTCTCAGCGGCTaGTCATTTACATTGCTCCTAGCCATACAGGAGAGC +
Preference number: 3 (lower is better)
Translates to: TFKGTARLFLSG*SFTLLLAIQES
Trigger: GCTCTCCTGTATGGCTAGGAGCAATGTAAATGAGCAGCCGCTGAGAAACAGTCTGGCAGTTCCTTTAAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR CCA 72 bp TACAGCGTGGAGCAGCATGCCATTGCTTTTCATGGCTaGCTAATAGTCCATGCAACGGATGGACCACATTTT +
Preference number: 3 (lower is better)
Translates to: YSVEQHAIAFHG*LIVHATDGPHF
Trigger: AAAATGTGGTCCATCCGTTGCATGGACTATTAGCCAGCCATGAAAAGCAATGGCATGCTGCTCCACGCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR-3UTR CAA 90 bp GGGCAATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCATGGCTGCTCATTTACATaGCTCCTAGCCATACAGGAG +
Preference number: 3 (lower is better)
Translates to: GQSVICCVSRNLQFWTFHGCSFT*LLAIQE
Trigger: CTCCTGTATGGCTAGGAGCAATGTAAATGAGCAGCC...ATGAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR TCA 72 bp AAGTCTGAATGCATTTCAGCTAACACGAATAATGCATaGCTAAGAACGCTGACGACGAGGCGGCTGAAGGGA +
Preference number: 3 (lower is better)
Translates to: KSECISANTNNA*LRTLTTRRLKG
Trigger: TCCCTTCAGCCGCCTCGTCGTCAGCGTTCTTAGTCATGCATTATTCGTGTTAGCTGAAATGCATTCAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp CCACATTTTGTTTACCCATTCATCACTGGACAGCCATaGAGGTGGTTTCCACCTCGGGGCCATAATAAACGA +
Preference number: 3 (lower is better)
Translates to: PHFVYPFITGQP*RWFPPRGHNKR
Trigger: TCGTTTATTATGGCCCCGAGGTGGAAACCACCTTCATGGCTGTCCAGTGATGAATGGGTAAACAAAATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR TCA 72 bp TACAATACTTGGGCTTCTGTGTCTGGCTTCTTCCACTaGGTTTCACGATGTTTCCCAGGTCTATCCCTGCTA +
Preference number: 3 (lower is better)
Translates to: YNTWASVSGFFH*VSRCFPGLSLL
Trigger: TAGCAGGGATAGACCTGGGAAACATCGTGAAACTCAGTGGAAGAAGCCAGACACAGAAGCCCAAGTATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR CCA 72 bp CACTGTCACTCCCAACTCAGACTTTCCTGCCTTGTCTaGAATAAAGAGCAGCACTGTTTGCTTTCAGAAAGG +
Preference number: 3 (lower is better)
Translates to: HCHSQLRLSCLV*NKEQHCLLSER
Trigger: CCTTTCTGAAAGCAAACAGTGCTGCTCTTTATTCCAGACAAGGCAGGAAAGTCTGAGTTGGGAGTGACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCCCCTCCTCCCTCTaGGTCTCATCTCACAAGCCT +
Preference number: 3 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVFPSSL*VSSHKP
Trigger: AGGCTTGTGAGATGAGACCAAGAGGGAGGAGGGGAA...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGGAAAGAAGACGAGACTaGGTGATGTCTGTGATTCCC +
Preference number: 3 (lower is better)
Translates to: TRLQKCNREDTGVTARHLERRRD*VMSVIP
Trigger: GGGAATCACAGACATCACCAAGTCTCGTCTTCTTTC...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR-3UTR CAA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGCCATCGTCTCTCCCCTaGGATATGGTGAATTTTTCC +
Preference number: 3 (lower is better)
Translates to: TRLQKCNREDTGVTARHLPSSLP*DMVNFS
Trigger: GGAAAAATTCACCATATCCAAGGGGAGAGACGATGG...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR TCA 72 bp CGACTCCCCTTTCCTGTGGACGCAGCTGGGAAAAAGTaGAACCTATCTCCAAGAATCATCAACATGAATACA +
Preference number: 3 (lower is better)
Translates to: RLPFPVDAAGKK*NLSPRIINMNT
Trigger: TGTATTCATGTTGATGATTCTTGGAGATAGGTTTCACTTTTTCCCAGCTGCGTCCACAGGAAAGGGGAGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR GCA 72 bp CCGGGCAATCTGTCATCTGCTGTGTCTCTAGGAATCTaGAGTTCTGGACATTTCATAGGGATGATACAATAC +
Preference number: 3 (lower is better)
Translates to: PGNLSSAVSLGI*SSGHFIGMIQY
Trigger: GTATTGTATCATCCCTATGAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTGCCCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR TCA 72 bp CATCAACATGAATACACGATTTACAGGACAAGGGAGTaGGACGGCTGCATCCTAAGAAAAATGGTTCAGCAG +
Preference number: 3 (lower is better)
Translates to: HQHEYTIYRTRE*DGCILRKMVQQ
Trigger: CTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAAATCGTGTATTCATGTTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp TGCTTTTCATGGCTGGCTAATAGTCCATGCAACGGATaGACCACATTTTGTTTACCCATTCATCACTGGACA +
Preference number: 3 (lower is better)
Translates to: CFSWLANSPCNG*TTFCLPIHHWT
Trigger: TGTCCAGTGATGAATGGGTAAACAAAATGTGGTCCATCCGTTGCATGGACTATTAGCCAGCCATGAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR CCA 72 bp GCCTCGGTGCTGGTTTTAAACCCAATGCGTGTTGCTTaGATTAACCTGAACATCAGGATTTTAATTTGGGTA +
Preference number: 3 (lower is better)
Translates to: ASVLVLNPMRVA*INLNIRILIWV
Trigger: TACCCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAAAACCAGCACCGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CCA 72 bp TCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTaGACATTTCATAGGGATGATACAATACTTGGGCTT +
Preference number: 3 (lower is better)
Translates to: SVICCVSRNLQF*TFHRDDTILGL
Trigger: AAGCCCAAGTATTGTATCATCCCTATGAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR TCA 72 bp GGAAAAAGTGAAACCTATCTCCAAGAATCATCAACATaGATACACGATTTACAGGACAAGGGAGTGAGACGG +
Preference number: 3 (lower is better)
Translates to: GKSETYLQESST*IHDLQDKGVRR
Trigger: CCGTCTCACTCCCTTGTCCTGTAAATCGTGTATTCATGTTGATGATTCTTGGAGATAGGTTTCACTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCGTCAGACTCGGCTGCTaGGGCGACTGCGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSVRLGC*GDCAAR
Trigger: GCGGGCGGCGCAGTCGCCGCAGCAGCCGAGTCTGAC...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258180.7
ENST00000538274.5
CDS-3UTR GCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCGCCGTCAGACTCGGCTaGTGCGGCGACTGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSAVRLG*CGDCAA
Trigger: GGCGGCGCAGTCGCCGCAGCAGCCGAGTCTGACGGC...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258180.7
ENST00000538274.5
CDS-3UTR TCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCGCCACAGCCCCACGCTaGGAGGGCTGGATGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSATAPR*EGWMGA
Trigger: GGCTCCCATCCAGCCCTCTCAGCGTGGGGCTGTGGC...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGTCAGACTCGGCTGCTaGGGCGACTGCGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: GRALGPGEWHMASVLLRSVRLGC*GDCAAR
Trigger: GCGGGCGGCGCAGTCGCCGCAGCAGCCGAGTCTGAC...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258180.7
ENST00000538274.5
CDS-3UTR GCA 90 bp GACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGGCGAGCCAGGCGGGGTaGAGCTGGCATCCGACTCCC +
Preference number: 4 (lower is better)
Translates to: DGRALGPGEWHMASVLLRASQAG*SWHPTP
Trigger: GGGAGTCGGATGCCAGCTGCACCCCGCCTGGCTCGC...CCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGATGCACGGGGGACTaGGGCGCAGAAGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCGCTGD*GAEGRP
Trigger: GGGCCTGCCTTCTGCGCCTCAGTCCCCCGTGCATCC...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTCCTGCCTGCATCCCTTaGCCGCCCCCACCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: GRALGPGEWHMASVLLRSPACIP*PPPPSP
Trigger: TGGCGAGGGTGGGGGCGGGCAAGGGATGCAGGCAGG...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGGTGACGGCCGGGCGCTaGGCCCGGGAGAATGGCACA +
Preference number: 4 (lower is better)
Translates to: GDGRALGPGEWHMASVLLVTAGR*ARENGT
Trigger: TGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC...CAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGGTGACGGCCGGGCGCTaGGCCCGGGAGAATGGCACA +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSAVTAGR*ARENGT
Trigger: TGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGCCAGCATGCAGGTGTTaGGGTCAGGCCCCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: DGRALGPGEWHMASVLLRPACRC*GQAPGP
Trigger: TGGGCCCGGGGCCTGACCCCAACACCTGCATGCTGG...CCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGGGTGCGTGGCCTGTGTaGCTCCGGGAAGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RPGAGPGRMAHGLSPPAEGAWPV*LREALL
Trigger: GAGCAGGGCTTCCCGGAGCCACACAGGCCACGCACC...CTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGACCCGTTGGGGCCCAATaGTGGGGGAAGGGTCACCCC +
Preference number: 4 (lower is better)
Translates to: TAGRWARENGTWPQSSCGPVGAQ*WGKGHP
Trigger: GGGGTGACCCTTCCCCCATCATTGGGCCCCAACGGG...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGTGGTCCCAGGACGGGTaGGAGGGCGACTCGCCCATG +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSAWSQDG*EGDSPM
Trigger: CATGGGCGAGTCGCCCTCGCACCCGTCCTGGGACCA...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCAGGTGGCCCTGGGTGTaGCCCTGGTGTGACACCTCC +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSRWPWV*PWCDTS
Trigger: GGAGGTGTCACACCAGGGGCACACCCAGGGCCACCT...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGATGCAGGTCATCGGGTaGGGTGACGGCCGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVMQVIG*GDGRAL
Trigger: CAGCGCCCGGCCGTCACCCCACCCGATGACCTGCAT...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGGCCACCCACCGTGAGTaGCAGCGCCGGCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGATHRE*QRRPST
Trigger: GGTGGAGGGCCGGCGCTGCCACTCACGGTGGGTGGC...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCGCTGAGAGGGCTGGATaGGAGCCGCGTGTGCACCCA +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSAERAG*EPRVHP
Trigger: TGGGTGCACACGCGGCTCCCATCCAGCCCTCTCAGC...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGCCCGTTGGGGCCCAATaGTGGGGGAAGGGTCACCCC +
Preference number: 4 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRPVGAQ*WGKGHP
Trigger: GGGGTGACCCTTCCCCCATCATTGGGCCCCAACGGG...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCGGATGCACGGGGGACTaGGGCGCAGAAGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGGCTGD*GAEGRP
Trigger: GGGCCTGCCTTCTGCGCCTCAGTCCCCCGTGCATCC...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCGGAGCGCTGTCCCACTaGAATCCCGTGGCCACGTGC +
Preference number: 4 (lower is better)
Translates to: WGDGRALGPGEWHMASVLGALSH*NPVATC
Trigger: GCACGTGGCCACGGGATTTCAGTGGGACAGCGCTCC...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGGGAGCGCTGTCCCACTaGAATCCCGTGGCCACGTGC +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSAGALSH*NPVATC
Trigger: GCACGTGGCCACGGGATTTCAGTGGGACAGCGCTCC...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCGGTAGGAGTCGATGCTaGCCGCGGGCTTCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: ALGPGEWHMASVLLRSATGRSRC*PRASPG
Trigger: CCCGGGAGAAGCCCGCGGGCAGCATCGACTCCTACC...GGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTTGGCCTCAGTCCTCCTaGGGAGTGCGACCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GRALGPGEWHMASVLLRSWPQSS*GVRPLG
Trigger: CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCA...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGATGGCCTCAGTCCTCCTaGGGAGTGCGACCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TAGRWARENGTWPQSSCGWPQSS*GVRPLG
Trigger: CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCA...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGTGGCCTCAGTCCTCCTaGGGAGTGCGACCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVWPQSS*GVRPLG
Trigger: CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCA...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCCTGCCTGCATCCCTTaGCCGCCCCCACCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGPACIP*PPPPSP
Trigger: TGGCGAGGGTGGGGGCGGGCAAGGGATGCAGGCAGG...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGCGTGTGCACCCATTaGAGGGAAGGTGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: GDGRALGPGEWHMASVLLRVCTH*REGGPR
Trigger: CCGTGGGCCACCTTCCCTGCAATGGGTGCACACGCG...CAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGAGCTCCCGGGCCGTCTaGAGGCACACACACGTCCCT +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVSSRAV*RHTHVP
Trigger: AGGGACGTGTGTGTGCCTGCAGACGGCCCGGGAGCT...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGGCTCTGGACCCAGCATaGAGGTGTTGGGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: DGRALGPGEWHMASVLLRALDPA*RCWGQA
Trigger: GGCCTGACCCCAACACCTGCATGCTGGGTCCAGAGC...CCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGAGCCCAGCTCATGCCTaGTCTGCCCAGGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSASPAHA*SAQVLG
Trigger: CCCCAGGACCTGGGCAGAGCAGGCATGAGCTGGGCT...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCGGGCGGCAGAGTGCCTaGAATGGCCCCATGGATGAC +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSGRQSA*NGPMDD
Trigger: GTCATCCATGGGGCCATTGCAGGCACTCTGCCGCCC...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGGCCACTGCCACCCTaGGAGCATCCCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCGPLPP*EHPFLC
Trigger: GCAGAGGAAGGGATGCTCGCAGGGTGGCAGTGGCCC...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGGGCCACTGCCACCCTaGGAGCATCCCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TAGRWARENGTWPQSSCGGPLPP*EHPFLC
Trigger: GCAGAGGAAGGGATGCTCGCAGGGTGGCAGTGGCCC...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACTGGGGCTGGGCCACTaGCACCCTGCGAGCATCCCT +
Preference number: 4 (lower is better)
Translates to: GRWARENGTWPQSSCGVRLGLGH*HPASIP
Trigger: AGGGATGCTCGCAGGGTGGCAGTGGCCCAGCCCCAG...TCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTGCGAGCCAGGCGGGGTaGAGCTGGCATCCGACTCCC +
Preference number: 4 (lower is better)
Translates to: RWARENGTWPQSSCGVRPASQAG*SWHPTP
Trigger: GGGAGTCGGATGCCAGCTGCACCCCGCCTGGCTCGC...AGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGCTGCAGCACAGGGGGTaGTGCCTCCAGGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RPGAGPGRMAHGLSPPAELQHRG*CLQGRR
Trigger: TCTTCTCCCCTGGAGGCACCACCCCCTGTGCTGCAG...CTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGGCGGAGTGCGACCTCTaGGGCCTACTCAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: DGRALGPGEWHMASVLLRAECDL*GLLSGH
Trigger: ATGGCCACTGAGTAGGCCCCAGAGGTCGCACTCCGC...CCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGCAGAGGCCACGCCACTaGCTTGCCCTGCACGTTGCA +
Preference number: 4 (lower is better)
Translates to: RPGAGPGRMAHGLSPPAEQRPRH*LALHVA
Trigger: TGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTG...CTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGACCCGGGCCCATGGGCTaGCCTGGAGTACCTGGTACA +
Preference number: 4 (lower is better)
Translates to: TAGRWARENGTWPQSSCGPGPMG*PGVPGT
Trigger: TGTACCAGGTACTCCAGGCCAGCCCATGGGCCCGGG...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCAGGCCCCGGGCCCATaGGCTGGCCTGGAGTACCTG +
Preference number: 4 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGQAPGP*AGLEYL
Trigger: CAGGTACTCCAGGCCAGCCCATGGGCCCGGGGCCTG...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGCCCTGGAGCCGTGGCTaGACGCTGCAGGAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSAPWSRG*TLQEVC
Trigger: ACACACCTCCTGCAGCGTCCAGCCACGGCTCCAGGG...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGACAGGCGGGGTGCAGCTaGCATCCGACTCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TAGRWARENGTWPQSSCGQAGCS*HPTPLS
Trigger: GGAAAGGGGAGTCGGATGCCAGCTGCACCCCGCCTG...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGGCAGCAAGGGTTCCTaGGGTGCGTGGCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PGAGPGRMAHGLSPPAECGSKGS*GAWPVW
Trigger: CCACACAGGCCACGCACCCCAGGAACCCTTGCTGCC...GCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGCCACAGCCCCACGCTaGGAGGGCTGGATGGGAGCC +
Preference number: 4 (lower is better)
Translates to: WARENGTWPQSSCGVRPLATAPR*EGWMGA
Trigger: GGCTCCCATCCAGCCCTCTCAGCGTGGGGCTGTGGC...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCCACGCAGGGACCTTTaGGCAGTGTGGCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVPRRDL*AVWLGL
Trigger: CAGACCCAGCCACACTGCTCAAAGGTCCCTGCGTGG...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGCAATGGCCCCATGGATaGCAGGCCTTCGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RPGAGPGRMAHGLSPPAEQWPHG*QAFVLL
Trigger: CAGGAGCACGAAGGCCTGTCATCCATGGGGCCATTG...CTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGCTGGGCTGGGAGGAGTaGGCGAGAGGCCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSALGWEE*ARGLFG
Trigger: ACCAAACAGGCCTCTCGCTCACTCCTCCCAGCCCAG...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGAGGTGGAGGCTGCAGTaGACGGAGATCGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RPGAGPGRMAHGLSPPAERWRLQ*TEIVPL
Trigger: CAGAGGCACGATCTCCGTTCACTGCAGCCTCCACCT...CTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566428.5
CDS-3UTR TCA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGGCGGGTGGCTCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GRALGPGEWHMASVLLRSGGWLT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGAGCCACCCGCC...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566428.5
CDS-3UTR GCA 90 bp GACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGGCCTGGTGTCCCAGGTaGGTTAGTAGGAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: DGRALGPGEWHMASVLLRAWCPR*VSRSPP
Trigger: TGGTGGGCTCCTACTAACGCACCTGGGACACCAGGC...CCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGTGGTCCCAGGACGGGTaGGAGGGCGACTCGCCCATG +
Preference number: 4 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWWSQDG*EGDSPM
Trigger: CATGGGCGAGTCGCCCTCGCACCCGTCCTGGGACCA...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTTCAGGTAGGAGTCGATaGTGCCCGCGGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GRALGPGEWHMASVLLRSSGRSR*CPRASP
Trigger: GGGAGAAGCCCGCGGGCAGCATCGACTCCTACCTGA...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCAGTCCTCCTGCGGAGTaGGACCTCTGGGGCCTACTC +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCSPPAE*DLWGLL
Trigger: GAGTAGGCCCCAGAGGTCGCACTCCGCAGGAGGACT...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCGATGGGAGCCGCGTGTaGACCCATTGCAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSDGSRV*THCREG
Trigger: ACCTTCCCTGCAATGGGTGCACACGCGGCTCCCATC...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGTGGGAGCCAGGTCTTaGTCCAGCCGGCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GRALGPGEWHMASVLLRSVGARS*SSRPRA
Trigger: TGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCAC...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGGCTGGGTCTGCTTaGTCTGCACCACAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TAGRWARENGTWPQSSCGVAGSA*SAPQPS
Trigger: GCTGGGCTGTGGTGCAGAGCAAGCAGACCCAGCCAC...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCGTGGCTGGGTCTGCTTaGTCTGCACCACAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: WGDGRALGPGEWHMASVLVAGSA*SAPQPS
Trigger: GCTGGGCTGTGGTGCAGAGCAAGCAGACCCAGCCAC...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCGGTCGGGCGGCAGAGTaGCTGCAATGGCCCCATGGA +
Preference number: 4 (lower is better)
Translates to: ALGPGEWHMASVLLRSATGRAAE*LQWPHG
Trigger: TCCATGGGGCCATTGCAGGCACTCTGCCGCCCGACC...GGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCTGGGCCACTaGCACCCTGCGAGCATCCCT +
Preference number: 4 (lower is better)
Translates to: RWARENGTWPQSSCGVRPLGLGH*HPASIP
Trigger: AGGGATGCTCGCAGGGTGGCAGTGGCCCAGCCCCAG...AGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGCGAGCCAGGCGGGGTaGAGCTGGCATCCGACTCCC +
Preference number: 4 (lower is better)
Translates to: LGPGEWHMASVLLRSATSASQAG*SWHPTP
Trigger: GGGAGTCGGATGCCAGCTGCACCCCGCCTGGCTCGC...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCTGCAGCACAGGGGGTaGTGCCTCCAGGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVLQHRG*CLQGRR
Trigger: TCTTCTCCCCTGGAGGCACCACCCCCTGTGCTGCAG...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTCTTCCTCGTTCCTCCTaGCCAGGGGCCCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GRALGPGEWHMASVLLRSLPRSS*PGAPSA
Trigger: AGCTGAAGGGGCCCCTGGCCAGGAGGAACGAGGAAG...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCACGCGGTCACAGCCCTaGGCCGCTTCTCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: ALGPGEWHMASVLLRSATTRSQP*AASPGV
Trigger: AACCCCAGGAGAAGCGGCCCAGGGCTGTGACCGCGT...GGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTCGTCGCGCTCCTCCTaGGTCATGTGGCACCACTTC +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSSSRSS*VMWHHF
Trigger: GAAGTGGTGCCACATGACCCAGGAGGAGCGCGACGA...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGGGCCCGGGAGAATaGCACATGGCCTCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: WGDGRALGPGEWHMASVLLGPGE*HMASVL
Trigger: GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGATGCAGGTCATCGGGTaGGGTGACGGCCGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGMQVIG*GDGRAL
Trigger: CAGCGCCCGGCCGTCACCCCACCCGATGACCTGCAT...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGGGCTCTGGGTGCTGCTaGCTTCATGCAGGTCATCGG +
Preference number: 4 (lower is better)
Translates to: RPGAGPGRMAHGLSPPAEGSGCC*LHAGHR
Trigger: CCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCC...CTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCACCCTCGCCAGCCCTTaGCCCACGATGGCCCATGGA +
Preference number: 4 (lower is better)
Translates to: ALGPGEWHMASVLLRSATTLASP*PTMAHG
Trigger: TCCATGGGCCATCGTGGGCCAAGGGCTGGCGAGGGT...GGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCCCGGCCCTCCACCACTaGGTGTGCCGGCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASPALHH*VCRLQP
Trigger: GGGCTGCAGCCGGCACACCCAGTGGTGGAGGGCCGG...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGCCCATGGGCTGGCCTaGAGTACCTGGTACAGACCC +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCAHGLA*STWYRP
Trigger: GGGTCTGTACCAGGTACTCCAGGCCAGCCCATGGGC...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGAGCATGGTCACGGTCTaGCCAGCGGCATCGCTAGGC +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSASMVTV*PAASLG
Trigger: GCCTAGCGATGCCGCTGGCCAGACCGTGACCATGCT...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCCCTGGAGCCGTGGCTaGACGCTGCAGGAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDPWSRG*TLQEVC
Trigger: ACACACCTCCTGCAGCGTCCAGCCACGGCTCCAGGG...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCCCCTGGGTGTGCCCCTaGTGTGACACCTCCCCACGC +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGPWVCP*CDTSPR
Trigger: GCGTGGGGAGGTGTCACACCAGGGGCACACCCAGGG...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCGGCCGTTTCGCCTTGTaGCTGCGGAAACTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSGRFAL*LRKLRR
Trigger: CCTCCTCAGTTTCCGCAGCCACAAGGCGAAACGGCC...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGCACCCCCAGCCCCTGTaGGAGCGCTGTCCCACTGAA +
Preference number: 4 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRHPQPL*ERCPTE
Trigger: TTCAGTGGGACAGCGCTCCCACAGGGGCTGGGGGTG...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCAGTGGTCTCACTCTCTaGTGCACCGTCCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCSGLTL*CTVPQG
Trigger: TCCCTGGGGGACGGTGCATCAGAGAGTGAGACCACT...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCCCCCGAAGAAGCCCTTaGCATTCTCAGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCPRRSP*HSQSWP
Trigger: CGGCCAGGACTGAGAATGTCAAGGGCTTCTTCGGGG...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCCAGCATGTTGTGCGTaGATGTGCCCAGCTGCCCGA +
Preference number: 4 (lower is better)
Translates to: WGDGRALGPGEWHMASVLPACCA*MCPAAR
Trigger: TCGGGCAGCTGGGCACATTCACGCACAACATGCTGG...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTCCAGCATGTTGTGCGTaGATGTGCCCAGCTGCCCGA +
Preference number: 4 (lower is better)
Translates to: GRALGPGEWHMASVLLRSPACCA*MCPAAR
Trigger: TCGGGCAGCTGGGCACATTCACGCACAACATGCTGG...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGTCCACGCACGGTaGAACAGAAGGCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: DGRALGPGEWHMASVLLRSVHAR*NRRLWT
Trigger: GGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACT...CCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCAATGGCCCCATGGATaGCAGGCCTTCGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: WGDGRALGPGEWHMASVLQWPHG*QAFVLL
Trigger: CAGGAGCACGAAGGCCTGTCATCCATGGGGCCATTG...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGTGTGGCTGCGGAAACTaGGGAGGGACCAGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GDGRALGPGEWHMASVLLCGCGN*GGTSLR
Trigger: TCTGAGGCTGGTCCCTCCTCAGTTTCCGCAGCCACA...CAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCGCGTGTGCACCCATTaGAGGGAAGGTGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGRVCTH*REGGPR
Trigger: CCGTGGGCCACCTTCCCTGCAATGGGTGCACACGCG...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGATGGGAGCCGCGTGTaGACCCATTGCAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: GRALGPGEWHMASVLLRSDGSRV*THCREG
Trigger: ACCTTCCCTGCAATGGGTGCACACGCGGCTCCCATC...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCGATGGGAGCCGCGTGTaGACCCATTGCAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: WGDGRALGPGEWHMASVLDGSRV*THCREG
Trigger: ACCTTCCCTGCAATGGGTGCACACGCGGCTCCCATC...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGGTCACTTCCTGTTCCTaGCCCACAGCGGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVVTSCS*PTAGDW
Trigger: CCAGTCTCCCGCTGTGGGGCAGGAACAGGAAGTGAC...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGGTCACTTCCTGTTCCTaGCCCACAGCGGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSAVTSCS*PTAGDW
Trigger: CCAGTCTCCCGCTGTGGGGCAGGAACAGGAAGTGAC...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGAGCTCCCGGGCCGTCTaGAGGCACACACACGTCCCT +
Preference number: 4 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWSSRAV*RHTHVP
Trigger: AGGGACGTGTGTGTGCCTGCAGACGGCCCGGGAGCT...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACGGACACCTCGGCACTaGTGTGACTCTGGCGGAGAC +
Preference number: 4 (lower is better)
Translates to: GRWARENGTWPQSSCGVRRTPRH*CDSGGD
Trigger: GTCTCCGCCAGAGTCACAGCAGTGCCGAGGTGTCCG...TCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGAGCCCAGCTCATGCCTaGTCTGCCCAGGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGSPAHA*SAQVLG
Trigger: CCCCAGGACCTGGGCAGAGCAGGCATGAGCTGGGCT...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGGCGGCACCCATCCTTaGGAGCCCATCGGTCACAGG +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGGGTHP*EPIGHR
Trigger: CCTGTGACCGATGGGCTCGCAAGGATGGGTGCCGCC...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCCTGCACCTCCCAGAGTaGATGCGGTCGTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGLHLPE*MRSSPT
Trigger: GGTGGGGGACGACCGCATGCACTCTGGGAGGTGCAG...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTTCCTCGTTCCTCCTaGCCAGGGGCCCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDLPRSS*PGAPSA
Trigger: AGCTGAAGGGGCCCCTGGCCAGGAGGAACGAGGAAG...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGCTGGGCCGCTTCTCCTaGGGTTTGTTCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RPGAGPGRMAHGLSPPAELGRFS*GLFSSS
Trigger: GGAAGACGAGAACAAACCCCAGGAGAAGCGGCCCAG...CTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGACGCGGTCACAGCCCTaGGCCGCTTCTCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGTRSQP*AASPGV
Trigger: AACCCCAGGAGAAGCGGCCCAGGGCTGTGACCGCGT...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGACGGGAGAATGGCACATaGCCTCAGTCCTCCTGCGGA +
Preference number: 4 (lower is better)
Translates to: TAGRWARENGTWPQSSCGRENGT*PQSSCG
Trigger: TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCG...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGGCTCTGGGTGCTGCTaGCTTCATGCAGGTCATCGG +
Preference number: 4 (lower is better)
Translates to: GRALGPGEWHMASVLLRSGSGCC*LHAGHR
Trigger: CCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCC...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCCCACAGCGGGAGACTaGGGAATAGTGAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: WGDGRALGPGEWHMASVLPTAGD*GIVRTS
Trigger: GCTGGTCCTCACTATTCCCCAGTCTCCCGCTGTGGG...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCCACACGTCCCTCTGGTaGGAGCCAGGTCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PGAGPGRMAHGLSPPAECHTSLW*EPGLAP
Trigger: TGGAGCAAGACCTGGCTCCCACCAGAGGGACGTGTG...GCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGGGAGCTACAAAGGTCTaGTGGGGAAGGGGCCCAATG +
Preference number: 4 (lower is better)
Translates to: DGRALGPGEWHMASVLLRGATKV*WGRGPM
Trigger: CATTGGGCCCCTTCCCCACCAGACCTTTGTAGCTCC...CCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCCCCGGGCCCATGGGCTaGCCTGGAGTACCTGGTACA +
Preference number: 4 (lower is better)
Translates to: AGPGRMAHGLSPPAECDLPGPMG*PGVPGT
Trigger: TGTACCAGGTACTCCAGGCCAGCCCATGGGCCCGGG...GAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGCCAGCATGCAGGTGTTaGGGTCAGGCCCCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: WARENGTWPQSSCGVRPLPACRC*GQAPGP
Trigger: TGGGCCCGGGGCCTGACCCCAACACCTGCATGCTGG...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGAGCACACTGGCAGCATaGTCACGGTCTGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRSTLAA*SRSGQR
Trigger: CCGCTGGCCAGACCGTGACCATGCTGCCAGTGTGCT...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTCATGGCGAGCACACTaGCAGCATGGTCACGGTCTG +
Preference number: 4 (lower is better)
Translates to: RPGAGPGRMAHGLSPPAESWRAH*QHGHGL
Trigger: CAGACCGTGACCATGCTGCCAGTGTGCTCGCCATGA...CTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTAGGAGAGCAGTGCCCTaGAGCCGTGGCTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: RWARENGTWPQSSCGVRPRRAVP*SRGWTL
Trigger: CAGCGTCCAGCCACGGCTCCAGGGCACTGCTCTCCT...AGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGAGGAGAGCAGTGCCCTaGAGCCGTGGCTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGRRAVP*SRGWTL
Trigger: CAGCGTCCAGCCACGGCTCCAGGGCACTGCTCTCCT...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCTCTCCTACACCCAGGTaGCCCTGGGTGTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGSPTPR*PWVCPW
Trigger: CCAGGGGCACACCCAGGGCCACCTGGGTGTAGGAGA...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGGGGCATTCTGCCTGCTaGGACTGGGAACCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVGHSAC*DWEPLP
Trigger: AGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCC...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGGCCGTTTCGCCTTGTaGCTGCGGAAACTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PGAGPGRMAHGLSPPAECGRFAL*LRKLRR
Trigger: CCTCCTCAGTTTCCGCAGCCACAAGGCGAAACGGCC...GCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGGGCCGTTTCGCCTTGTaGCTGCGGAAACTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GDGRALGPGEWHMASVLLGRFAL*LRKLRR
Trigger: CCTCCTCAGTTTCCGCAGCCACAAGGCGAAACGGCC...CAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGGGTTCCTGGGGTGCGTaGCCTGTGTGGCTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGGSWGA*PVWLRE
Trigger: TTCCCGGAGCCACACAGGCCACGCACCCCAGGAACC...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGGTTCCTGGGGTGCGTaGCCTGTGTGGCTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGGSWGA*PVWLRE
Trigger: TTCCCGGAGCCACACAGGCCACGCACCCCAGGAACC...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCACACATTCCTGTTCCTaGCCCGCGGCAGCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSTHSCS*PAAARV
Trigger: AACCCTTGCTGCCGCGGGCCAGGAACAGGAATGTGT...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGAGTGACTGCTGGCCCCGTCAGTAAGAGGGTGACGGGAAGCCGCGGGCTCGGCAGTGGTCTCACTCTCTaGTGCACCGTCCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GVTAGPVSKRVTGSRGLGSGLTL*CTVPQG
Trigger: TCCCTGGGGGACGGTGCATCAGAGAGTGAGACCACT...GCCGAGCCCGCGGCTTCCCGTCACCCTCTTACTGACGGGGCCAGCAGTCACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR TCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGCCAGCATGTTGTGCGTaGATGTGCCCAGCTGCCCGA +
Preference number: 4 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRPACCA*MCPAAR
Trigger: TCGGGCAGCTGGGCACATTCACGCACAACATGCTGG...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCCACGGCCACCCACCGTaGGTGGCAGCGCCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLHGHPP*VAAPAL
Trigger: GAGGGCCGGCGCTGCCACTCACGGTGGGTGGCCGTG...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGACCTCGGCACTGCTGTaGCTCTGGCGGAGACACACA +
Preference number: 4 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRTSALL*LWRRHT
Trigger: TGTGTGTCTCCGCCAGAGTCACAGCAGTGCCGAGGT...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGGCAGTAAGTGCGAGGTaGAGGGAGTCTCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSAAVSAR*RESLQR
Trigger: CCTCTGCAGAGACTCCCTTCACCTCGCACTTACTGC...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCAGTGGCCGGGTAAGTaGCTCTCAGGCGTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: WGDGRALGPGEWHMASVLQWPGK*LSGVSV
Trigger: CACAGAAACGCCTGAGAGTCACTTACCCGGCCACTG...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGGCGGCATCGCTAGGCTaGGATCACTCATGCACCATG +
Preference number: 4 (lower is better)
Translates to: GDGRALGPGEWHMASVLLAASLG*DHSCTM
Trigger: CATGGTGCATGAGTGATCTCAGCCTAGCGATGCCGC...CAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGGCATCGCTAGGCTaGGATCACTCATGCACCATG +
Preference number: 4 (lower is better)
Translates to: GRALGPGEWHMASVLLRSAASLG*DHSCTM
Trigger: CATGGTGCATGAGTGATCTCAGCCTAGCGATGCCGC...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCCCCTTGAGTGTGGCCTaGGTTTCACCGGTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCPLSVA*VSPVQG
Trigger: TCCTTGCACCGGTGAAACTCAGGCCACACTCAAGGG...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCCCTTGAGTGTGGCCTaGGTTTCACCGGTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVPLSVA*VSPVQG
Trigger: TCCTTGCACCGGTGAAACTCAGGCCACACTCAAGGG...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCCCACGCAGGGACCTTTaGGCAGTGTGGCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: AGPGRMAHGLSPPAECDLPRRDL*AVWLGL
Trigger: CAGACCCAGCCACACTGCTCAAAGGTCCCTGCGTGG...GAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGCAATGGCCCCATGGATaGCAGGCCTTCGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRQWPHG*QAFVLL
Trigger: CAGGAGCACGAAGGCCTGTCATCCATGGGGCCATTG...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACGCCTGGTGTCCCAGGTaGGTTAGTAGGAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDAWCPR*VSRSPP
Trigger: TGGTGGGCTCCTACTAACGCACCTGGGACACCAGGC...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCGGGAGAAGAGGTGGGTaGCTCAGGCCCAAAGTCGAT +
Preference number: 4 (lower is better)
Translates to: WGDGRALGPGEWHMASVLGRRGG*LRPKVD
Trigger: ATCGACTTTGGGCCTGAGGCACCCACCTCTTCTCCC...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGCTCGAACAGCACCACTaGAAAAGACTGCACCAGGCG +
Preference number: 4 (lower is better)
Translates to: DGRALGPGEWHMASVLLRLEQHH*KRLHQA
Trigger: CGCCTGGTGCAGTCTTTTGCAGTGGTGCTGTTCGAG...CCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCAGTCCTCCTGCGGAGTaGGACCTCTGGGGCCTACTC +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGSPPAE*DLWGLL
Trigger: GAGTAGGCCCCAGAGGTCGCACTCCGCAGGAGGACT...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCAGGAGTGGCTCTGGGTaGTGCTGGCTTCATGCAGGT +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCRSGSG*CWLHAG
Trigger: ACCTGCATGAAGCCAGCAGCACCCAGAGCCACTCCT...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGGTCACTTCCTGTTCCTaGCCCACAGCGGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRVTSCS*PTAGDW
Trigger: CCAGTCTCCCGCTGTGGGGCAGGAACAGGAAGTGAC...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCGTGGGAGCCAGGTCTTaGTCCAGCCGGCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: AGPGRMAHGLSPPAECDLVGARS*SSRPRA
Trigger: TGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCAC...GAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCGGACACCTCGGCACTaGTGTGACTCTGGCGGAGAC +
Preference number: 4 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGRTPRH*CDSGGD
Trigger: GTCTCCGCCAGAGTCACAGCAGTGCCGAGGTGTCCG...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCGCCACGCCACTGGCTTaGCCTGCACGTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: ALGPGEWHMASVLLRSATATPLA*PARCTD
Trigger: ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGC...GGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGGGGGAAGGGGCCCAATaGTCAGCGCTTAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRGEGAQ*SALRGR
Trigger: TCTGCCTCTAAGCGCTGAGCATTGGGCCCCTTCCCC...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACGGGGAAGGGGCCCAATaGTCAGCGCTTAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDGEGAQ*SALRGR
Trigger: TCTGCCTCTAAGCGCTGAGCATTGGGCCCCTTCCCC...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCTCTGGACCCAGCATaGAGGTGTTGGGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGALDPA*RCWGQA
Trigger: GGCCTGACCCCAACACCTGCATGCTGGGTCCAGAGC...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGAGCTCATGCCTGCTCTaGCCAGGTCCTGGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRSSCLL*PGPGGR
Trigger: TCTTCCCCCAGGACCTGGGCAGAGCAGGCATGAGCT...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCGGGCGGCAGAGTGCCTaGAATGGCCCCATGGATGAC +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGGRQSA*NGPMDD
Trigger: GTCATCCATGGGGCCATTGCAGGCACTCTGCCGCCC...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGTCGGGCGGCAGAGTaGCTGCAATGGCCCCATGGA +
Preference number: 4 (lower is better)
Translates to: LGPGEWHMASVLLRSATSGRAAE*LQWPHG
Trigger: TCCATGGGGCCATTGCAGGCACTCTGCCGCCCGACC...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGTGTGGTCTTAGCCTGTaGGAGCCAGGCGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGCGLSL*EPGGVQ
Trigger: CTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACA...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTCTGCACCTCCCAGAGTaGATGCGGTCGTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: LGPGEWHMASVLLRSATSLHLPE*MRSSPT
Trigger: GGTGGGGGACGACCGCATGCACTCTGGGAGGTGCAG...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGCCTCTGGGGTCTCCATaGCTCAGGGGAGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWPLGSP*LRGAAG
Trigger: ACCAGCAGCTCCCCTGAGCCATGGAGACCCCAGAGG...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGCAGCACAGGGGGTaGTGCCTCCAGGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RWARENGTWPQSSCGVRPLQHRG*CLQGRR
Trigger: TCTTCTCCCCTGGAGGCACCACCCCCTGTGCTGCAG...AGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGAGGAACGGCGGTCTTaGTCCCAGGACGGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: LGPGEWHMASVLLRSATSEERRS*SQDGCE
Trigger: CTCGCACCCGTCCTGGGACCAAGACCGCCGTTCCTC...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCAGGGTCTCTTCATCCTaGGTAGACTCGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSRVSSS*VDSVLW
Trigger: CCAGAGCACCGAGTCTACCCAGGATGAAGAGACCCT...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGTTGGAGTTGCAGCGCTaGGCACTCACGTATCGAGCA +
Preference number: 4 (lower is better)
Translates to: DGRALGPGEWHMASVLLRLELQR*ALTYRA
Trigger: TGCTCGATACGTGAGTGCCCAGCGCTGCAACTCCAA...CCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGACCTCTGAGACACACTTaGAGTTGCAGCGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: TAGRWARENGTWPQSSCGPLRHT*SCSAGH
Trigger: GTGCCCAGCGCTGCAACTCCAAGTGTGTCTCAGAGG...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACTCGTCGCGCTCCTCCTaGGTCATGTGGCACCACTTC +
Preference number: 4 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDSSRSS*VMWHHF
Trigger: GAAGTGGTGCCACATGACCCAGGAGGAGCGCGACGA...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGCTGGGCCCGGGAGAATaGCACATGGCCTCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWLGPGE*HMASVL
Trigger: GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCTGGGCCCGGGAGAATaGCACATGGCCTCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGLGPGE*HMASVL
Trigger: GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACGGCTCTGGGTGCTGCTaGCTTCATGCAGGTCATCGG +
Preference number: 4 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDGSGCC*LHAGHR
Trigger: CCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCC...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCAGCAGGAGTGGCTCTaGGTGCTGCTGGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDQQEWL*VLLASC
Trigger: GCATGAAGCCAGCAGCACCCAGAGCCACTCCTGCTG...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGCCCACGATGGCCCATaGAGTCCTTCCCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LGPGEWHMASVLLRSATSAHDGP*SPSPPP
Trigger: GGGAGGAGGGGAAGGACTCCATGGGCCATCGTGGGC...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGTGCAGCCCCACCTCATaGCTGTCCTGCCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWCSPTS*LSCLHP
Trigger: GGGATGCAGGCAGGACAGCCATGAGGTGGGGCTGCA...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAACACACACGTCCCTCTaGTGGGAGCCAGGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: TAGRWARENGTWPQSSCGTHTSL*WEPGLA
Trigger: AGCAAGACCTGGCTCCCACCAGAGGGACGTGTGTGT...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCAGCATGGTCACGGTCTaGCCAGCGGCATCGCTAGGC +
Preference number: 4 (lower is better)
Translates to: AGPGRMAHGLSPPAECDLSMVTV*PAASLG
Trigger: GCCTAGCGATGCCGCTGGCCAGACCGTGACCATGCT...GAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCTCATGGCGAGCACACTaGCAGCATGGTCACGGTCTG +
Preference number: 4 (lower is better)
Translates to: PGAGPGRMAHGLSPPAECSWRAH*QHGHGL
Trigger: CAGACCGTGACCATGCTGCCAGTGTGCTCGCCATGA...GCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGTTCTCCAAGCAACCCTaGCCAGAGCCACTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVFSKQP*PEPLSA
Trigger: GGCTGACAGTGGCTCTGGCCAGGGTTGCTTGGAGAA...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTTTGAGCAGTGTGGCTaGGTCTGCTTGCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSFEQCG*VCLLCT
Trigger: GGTGCAGAGCAAGCAGACCCAGCCACACTGCTCAAA...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCCACTACTGGGCTCCCTaGCTGTGCTGTGGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCHYWAP*LCCGLV
Trigger: AACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTG...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTCAGGCGGGGTGCAGCTaGCATCCGACTCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LGPGEWHMASVLLRSATSQAGCS*HPTPLS
Trigger: GGAAAGGGGAGTCGGATGCCAGCTGCACCCCGCCTG...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCGGTGCGTGGCCTGTGTaGCTCCGGGAAGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTGAWPV*LREALL
Trigger: GAGCAGGGCTTCCCGGAGCCACACAGGCCACGCACC...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCCCCACTGAAATCCCGTaGCCACGTGCATCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AGPGRMAHGLSPPAECDLPTEIP*PRASPG
Trigger: GCCTGGGGATGCACGTGGCCACGGGATTTCAGTGGG...GAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCACCTCGGCACTGCTGTaGCTCTGGCGGAGACACACA +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGTSALL*LWRRHT
Trigger: TGTGTGTCTCCGCCAGAGTCACAGCAGTGCCGAGGT...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCGCAGTAAGTGCGAGGTaGAGGGAGTCTCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ALGPGEWHMASVLLRSATAVSAR*RESLQR
Trigger: CCTCTGCAGAGACTCCCTTCACCTCGCACTTACTGC...GGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGCCCTTGAGTGTGGCCTaGGTTTCACCGGTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRPLSVA*VSPVQG
Trigger: TCCTTGCACCGGTGAAACTCAGGCCACACTCAAGGG...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGCCACGCAGGGACCTTTaGGCAGTGTGGCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: WARENGTWPQSSCGVRPLPRRDL*AVWLGL
Trigger: CAGACCCAGCCACACTGCTCAAAGGTCCCTGCGTGG...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCCTGGGCTGGGAGGAGTaGGCGAGAGGCCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: EWLWVLLASCRSSGGVTALGWEE*ARGLFG
Trigger: ACCAAACAGGCCTCTCGCTCACTCCTCCCAGCCCAG...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGGAGAACGACCTTGAGTaGGAATCTGGCCGTTTCGCC +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSAENDLE*ESGRFA
Trigger: GGCGAAACGGCCAGATTCTCACTCAAGGTCGTTCTC...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGATGGTTCAGCAGAAGTaGATGGCTCAGTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: DGRALGPGEWHMASVLLRMVQQK*MAQWDW
Trigger: CCAGTCCCACTGAGCCATTCACTTCTGCTGAACCAT...CCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGCCAGCCAGCTGTTTaGGGATTTCAGGTAGGAGTC +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCGQPAV*GFQVGV
Trigger: GACTCCTACCTGAAATCCGCAAACAGCTGGCTGGCC...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGTGCCAGATGGGCTGTTaGTTCAGGTGCGTGTACAGG +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVCQMGC*FRCVYR
Trigger: CCTGTACACGCACCTGAAGCAACAGCCCATCTGGCA...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCTGCCAGATGGGCTGTTaGTTCAGGTGCGTGTACAGG +
Preference number: 4 (lower is better)
Translates to: WGDGRALGPGEWHMASVLCQMGC*FRCVYR
Trigger: CCTGTACACGCACCTGAAGCAACAGCCCATCTGGCA...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCCAGAACCTCAGAGTGTaGCAGATGGGCTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSQNLRV*QMGCCF
Trigger: GAAGCAACAGCCCATCTGGCACACTCTGAGGTTCTG...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGGTGAATGTGCCCAGCTaGCCGAAGGTGATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVVNVPS*PKVMFS
Trigger: CGAGAACATCACCTTCGGGCAGCTGGGCACATTCAC...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGAAGGCCAGCATGTTGTaGGTGAATGTGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GDGRALGPGEWHMASVLLKASML*VNVPSC
Trigger: GCAGCTGGGCACATTCACGCACAACATGCTGGCCTT...CAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTGTGCTGCTGGCTTCATaGAGGTCATCGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RWARENGTWPQSSCGVRPVLLAS*RSSGGV
Trigger: CACCCCACCCGATGACCTGCATGAAGCCAGCAGCAC...AGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCCGGACACCTCGGCACTaGTGTGACTCTGGCGGAGAC +
Preference number: 4 (lower is better)
Translates to: EWLWVLLASCRSSGGVTARTPRH*CDSGGD
Trigger: GTCTCCGCCAGAGTCACAGCAGTGCCGAGGTGTCCG...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCCCATGGAGGCTTCTCTaGTTCAGAAGGGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PGAGPGRMAHGLSPPAECPWRLL*FRRELS
Trigger: GGACAGCTCCCTTCTGAAGCAGAGAAGCCTCCATGG...GCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGACCATGGAGGCTTCTCTaGTTCAGAAGGGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: TAGRWARENGTWPQSSCGPWRLL*FRRELS
Trigger: GGACAGCTCCCTTCTGAAGCAGAGAAGCCTCCATGG...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGGGAAGGGGCCCAATaGTCAGCGCTTAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWGEGAQ*SALRGR
Trigger: TCTGCCTCTAAGCGCTGAGCATTGGGCCCCTTCCCC...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGCTCTGGACCCAGCATaGAGGTGTTGGGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: WARENGTWPQSSCGVRPLALDPA*RCWGQA
Trigger: GGCCTGACCCCAACACCTGCATGCTGGGTCCAGAGC...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGCCGGCTCCCCCGTTCTaGAGTCTGGCAGCATATGGT +
Preference number: 4 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWPAPPF*SLAAYG
Trigger: ACCATATGCTGCCAGACTGCAGAACGGGGGAGCCGG...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGGATTCGGTGGAGACATaGCCGTTGGGGCCCAATGAT +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVDSVET*PLGPND
Trigger: ATCATTGGGCCCCAACGGGCATGTCTCCACCGAATC...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGGCCGTGGCTGGACGCTaGAGGAGGTGTGTATTATCT +
Preference number: 4 (lower is better)
Translates to: GDGRALGPGEWHMASVLLAVAGR*RRCVLS
Trigger: AGATAATACACACCTCCTGCAGCGTCCAGCCACGGC...CAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGTCCTTCCAGAGGCTGTaGACAAGCTCTCCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSASFQRL*TSSPAF
Trigger: GAACGCTGGAGAGCTTGTGCACAGCCTCTGGAAGGA...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCAACGAAGTCAGCGCTaGCTTTCCTTCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GDGRALGPGEWHMASVLLQRSQR*LSFQRL
Trigger: CAGCCTCTGGAAGGAAAGGCAGCGCTGACTTCGTTG...CAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGCAGTGTGGCTGGGTCTaGTTGCTCTGCACCACAGCC +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGQCGWV*LLCTTA
Trigger: GGCTGTGGTGCAGAGCAAGCAGACCCAGCCACACTG...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCAGGTGGCCCTGGGTGTaGCCCTGGTGTGACACCTCC +
Preference number: 4 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTRWPWV*PWCDTS
Trigger: GGAGGTGTCACACCAGGGGCACACCCAGGGCCACCT...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCTGGTTTTGGGCATTCTaGCTGCTGGGACTGGGAACC +
Preference number: 4 (lower is better)
Translates to: PGAGPGRMAHGLSPPAECWFWAF*LLGLGT
Trigger: GGTTCCCAGTCCCAGCAGGCAGAATGCCCAAAACCA...GCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGGATGACAGGCCTTCGTaGTCCTGGTTTTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: RPGAGPGRMAHGLSPPAEDDRPS*SWFWAF
Trigger: GAATGCCCAAAACCAGGAGCACGAAGGCCTGTCATC...CTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCCATGCACAGGGCAGATaGAATCTATTACCACGGCCC +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSHAQGR*NLLPRP
Trigger: GGGCCGTGGTAATAGATTGCATCTGCCCTGTGCATG...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCGGGCCACTGCCACCCTaGGAGCATCCCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASGPLPP*EHPFLC
Trigger: GCAGAGGAAGGGATGCTCGCAGGGTGGCAGTGGCCC...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACACAAACCCAATCCCTTaGCAGCACCAGAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDTNPIP*QHQRQG
Trigger: GCCCTGCCTCTGGTGCTGGCAAGGGATTGGGTTTGT...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCAATCCCGTGGCCACGTaGATCCCCAGGCACAGCTAC +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGNPVAT*IPRHSY
Trigger: GTAGCTGTGCCTGGGGATGCACGTGGCCACGGGATT...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGAGATACTGGTGTCACTaGACGCCACTTGGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVRYWCH*TPLGGY
Trigger: GTAGCCCCCAAGTGGCGTGCAGTGACACCAGTATCT...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCAGGAGAAGGACTCGTTaGAGGAGGAACGGCGGTCTT +
Preference number: 4 (lower is better)
Translates to: PGAGPGRMAHGLSPPAECRRRTR*RRNGGL
Trigger: AAGACCGCCGTTCCTCCTCCAACGAGTCCTTCTCCT...GCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGTAGACTCGGTGCTCTaGTTGGAGGAGAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: GRALGPGEWHMASVLLRSVDSVL*LEEKDS
Trigger: CGAGTCCTTCTCCTCCAACCAGAGCACCGAGTCTAC...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGCGGGGGCAGCAGCTGTaGTTTTCCGATGTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSARGQQL*FSDVVV
Trigger: TACTACCACATCGGAAAACCACAGCTGCTGCCCCCG...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCTCAGAGTGTGCCAGATaGGCTGTTGCTTCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: PGAGPGRMAHGLSPPAECSECAR*AVASGA
Trigger: CGCACCTGAAGCAACAGCCCATCTGGCACACTCTGA...GCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCCAGCAGGAGTGGCTCTaGGTGCTGCTGGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGQQEWL*VLLASC
Trigger: GCATGAAGCCAGCAGCACCCAGAGCCACTCCTGCTG...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGCTCATCTCACAAGCCTaGCACTCGGGGTACAACTGG +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSALISQA*HSGYNW
Trigger: CCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAG...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCACCCTCGCCAGCCCTTaGCCCACGATGGCCCATGGA +
Preference number: 4 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASTLASP*PTMAHG
Trigger: TCCATGGGCCATCGTGGGCCAAGGGCTGGCGAGGGT...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCTGCAGCCCCACCTCATaGCTGTCCTGCCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: EWLWVLLASCRSSGGVTACSPTS*LSCLHP
Trigger: GGGATGCAGGCAGGACAGCCATGAGGTGGGGCTGCA...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCGCCACCCACCGTGAGTaGCAGCGCCGGCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFATHRE*QRRPST
Trigger: GGTGGAGGGCCGGCGCTGCCACTCACGGTGGGTGGC...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCCACACGTCCCTCTGGTaGGAGCCAGGTCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: AGPGRMAHGLSPPAECDLHTSLW*EPGLAP
Trigger: TGGAGCAAGACCTGGCTCCCACCAGAGGGACGTGTG...GAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCCCCCGTTCTGCAGTCTaGCAGCATATGGTCCAAATG +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSPRSAV*QHMVQM
Trigger: CATTTGGACCATATGCTGCCAGACTGCAGAACGGGG...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCATGGCGAGCACACTaGCAGCATGGTCACGGTCTG +
Preference number: 4 (lower is better)
Translates to: ALGPGEWHMASVLLRSATSWRAH*QHGHGL
Trigger: CAGACCGTGACCATGCTGCCAGTGTGCTCGCCATGA...GGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGGCATCCTGTGTGGATaGAGCACAGAGGAGACCTTC +
Preference number: 4 (lower is better)
Translates to: GRALGPGEWHMASVLLRSGILCG*STEETF
Trigger: GAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCC...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGGGCATCCTGTGTGGATaGAGCACAGAGGAGACCTTC +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSAGILCG*STEETF
Trigger: GAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCC...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATCCCTGGGTGTGCCCCTaGTGTGACACCTCCCCACGC +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDPWVCP*CDTSPR
Trigger: GCGTGGGGAGGTGTCACACCAGGGGCACACCCAGGG...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCGGGCATTCTGCCTGCTaGGACTGGGAACCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGGHSAC*DWEPLP
Trigger: AGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCC...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGTGTAGCTTCCAGCCCTaGCTTCCAGCTAAGGAACCC +
Preference number: 4 (lower is better)
Translates to: GDGRALGPGEWHMASVLLCSFQP*LPAKEP
Trigger: GGGTTCCTTAGCTGGAAGCCAGGGCTGGAAGCTACA...CAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCACTACTGGGCTCCCTaGCTGTGCTGTGGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDHYWAP*LCCGLV
Trigger: AACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTG...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCCAGGCGGGGTGCAGCTaGCATCCGACTCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTQAGCS*HPTPLS
Trigger: GGAAAGGGGAGTCGGATGCCAGCTGCACCCCGCCTG...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGACACATTCCTGTTCCTaGCCCGCGGCAGCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRTHSCS*PAAARV
Trigger: AACCCTTGCTGCCGCGGGCCAGGAACAGGAATGTGT...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGAGTGGTCTCACTCTCTaGTGCACCGTCCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: WARENGTWPQSSCGVRPLSGLTL*CTVPQG
Trigger: TCCCTGGGGGACGGTGCATCAGAGAGTGAGACCACT...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTGCAGTAAGTGCGAGGTaGAGGGAGTCTCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RWARENGTWPQSSCGVRPAVSAR*RESLQR
Trigger: CCTCTGCAGAGACTCCCTTCACCTCGCACTTACTGC...AGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCGCCTTCCTCCAACTCTaGGGAGCTAGATCTACAAGA +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSAFLQL*GARSTR
Trigger: TCTTGTAGATCTAGCTCCTCAGAGTTGGAGGAAGGC...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGTCACCTGACACTTCCTaGGTTTACGGAGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGSPDTS*VYGGAT
Trigger: GGTGGCCCCTCCGTAAACTCAGGAAGTGTCAGGTGA...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGTACAGGACAAGGGAGTaGGACGGCTGCATCCTAAGA +
Preference number: 4 (lower is better)
Translates to: GDGRALGPGEWHMASVLLYRTRE*DGCILR
Trigger: TCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTA...CAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCAGACACACTTGGAGTTaGAGCGCTGGGCACTCACGT +
Preference number: 4 (lower is better)
Translates to: ALGPGEWHMASVLLRSATRHTWS*SAGHSR
Trigger: ACGTGAGTGCCCAGCGCTGCAACTCCAAGTGTGTCT...GGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCAGAACCTCAGAGTGTaGCAGATGGGCTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVQNLRV*QMGCCF
Trigger: GAAGCAACAGCCCATCTGGCACACTCTGAGGTTCTG...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCAGTCCTCCTGCGGAGTaGGACCTCTGGGGCCTACTC +
Preference number: 4 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASSPPAE*DLWGLL
Trigger: GAGTAGGCCCCAGAGGTCGCACTCCGCAGGAGGACT...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCACCTCATGGCTGTCCTaGCTGCATCCCTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTTSWLS*LHPLPA
Trigger: GGCGGGCAAGGGATGCAGGCAGGACAGCCATGAGGT...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGTTCCCAGGCAGTAAGTaGGAGGTGAAGGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSAFPGSK*EVKGVS
Trigger: AGAGACTCCCTTCACCTCGCACTTACTGCCTGGGAA...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCTTCCCAGGCAGTAAGTaGGAGGTGAAGGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCFPGSK*EVKGVS
Trigger: AGAGACTCCCTTCACCTCGCACTTACTGCCTGGGAA...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCCAAGGAGGAGAGCAGTaGCCTGGAGCCGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTQGGEQ*PGAVAG
Trigger: TCCAGCCACGGCTCCAGGGCACTGCTCTCCTCCTTG...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCCTGAGTTTCACCGGTaGAAGGAGGAGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RWARENGTWPQSSCGVRPPEFHR*KEESSA
Trigger: GGCACTGCTCTCCTCCTTGCACCGGTGAAACTCAGG...AGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTGGTTTTGGGCATTCTaGCTGCTGGGACTGGGAACC +
Preference number: 4 (lower is better)
Translates to: ALGPGEWHMASVLLRSATWFWAF*LLGLGT
Trigger: GGTTCCCAGTCCCAGCAGGCAGAATGCCCAAAACCA...GGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGATGACAGGCCTTCGTaGTCCTGGTTTTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCDDRPS*SWFWAF
Trigger: GAATGCCCAAAACCAGGAGCACGAAGGCCTGTCATC...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTCATGCACAGGGCAGATaGAATCTATTACCACGGCCC +
Preference number: 4 (lower is better)
Translates to: GRALGPGEWHMASVLLRSHAQGR*NLLPRP
Trigger: GGGCCGTGGTAATAGATTGCATCTGCCCTGTGCATG...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGACAAACCCAATCCCTTaGCAGCACCAGAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWTNPIP*QHQRQG
Trigger: GCCCTGCCTCTGGTGCTGGCAAGGGATTGGGTTTGT...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCCGGGGAGGTGGAGGCTaGAGTGAACGGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTRGGGG*SERRSC
Trigger: GCACGATCTCCGTTCACTGCAGCCTCCACCTCCCCG...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566428.5
CDS-3UTR CCA 90 bp CCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCTGTCCGCAGACTCAGTaGTCTCACTCTCTGATGCAC +
Preference number: 4 (lower is better)
Translates to: PGAGPGRMAHGLSPPAECCPQTQ*SHSLMH
Trigger: GTGCATCAGAGAGTGAGACCACTGAGTCTGCGGACA...GCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGCTGGGCCGCTTCTCCTaGGGTTTGTTCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGLGRFS*GLFSSS
Trigger: GGAAGACGAGAACAAACCCCAGGAGAAGCGGCCCAG...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTCGGGAGAATGGCACATaGCCTCAGTCCTCCTGCGGA +
Preference number: 4 (lower is better)
Translates to: LGPGEWHMASVLLRSATSRENGT*PQSSCG
Trigger: TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCG...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTACACACACGTCCCTCTaGTGGGAGCCAGGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: RWARENGTWPQSSCGVRPTHTSL*WEPGLA
Trigger: AGCAAGACCTGGCTCCCACCAGAGGGACGTGTGTGT...AGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAAGTCTCTGCAGAGGCTaGAGGAGCTACAAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TAGRWARENGTWPQSSCGSLCRG*RSYKGL
Trigger: CAGACCTTTGTAGCTCCTCCAGCCTCTGCAGAGACT...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCAGCACACTGGCAGCATaGTCACGGTCTGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASSTLAA*SRSGQR
Trigger: CCGCTGGCCAGACCGTGACCATGCTGCCAGTGTGCT...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGTCTAAATGGATTCGGTaGAGACATGCCCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: GDGRALGPGEWHMASVLLSKWIR*RHARWG
Trigger: GCCCCAACGGGCATGTCTCCACCGAATCCATTTAGA...CAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGGAAGAGAGGAAACCTTaGTGGCAGGTGGTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSAEERKP*WQVVSP
Trigger: AGGGCTTACCACCTGCCACCAAGGTTTCCTCTCTTC...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCTCTTGGAAACACTACTaGGCTCCCTGGCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCSWKHY*APWLCC
Trigger: ACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGA...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGGCTCCACACTGTTCTTaGAAACACTACTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSAAPHCS*KHYWAP
Trigger: GGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGAGC...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCATGGCTCAGTGGGACTaGAAACGGGACAGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCMAQWD*KRDRKR
Trigger: CCTTTTCCTGTCCCGTTTCCAGTCCCACTGAGCCAT...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAAGTCTGCAGATAAAGTaGGGAGCTGGGTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: TAGRWARENGTWPQSSCGSLQIK*GAGFSP
Trigger: TGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACT...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 72 bp CAGGCACACACACGTCCCTCTGGTGGGAGCCAGGTCTaGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCA +
Preference number: 4 (lower is better)
Translates to: QAHTRPSGGSQV*LQPAKSILYTA
Trigger: TGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCAGAGGGACGTGTGTGTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCCAGTGGCCGGGTAAGTaGCTCTCAGGCGTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: EWLWVLLASCRSSGGVTAQWPGK*LSGVSV
Trigger: CACAGAAACGCCTGAGAGTCACTTACCCGGCCACTG...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATCTGGGCTGGGAGGAGTaGGCGAGAGGCCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDLGWEE*ARGLFG
Trigger: ACCAAACAGGCCTCTCGCTCACTCCTCCCAGCCCAG...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGAGAAGGCAGGCCCCCTaGGGGCCTGTATGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: QCPRTVKQKALDPACRCWRRQAP*GPVWRA
Trigger: CGCCCTCCATACAGGCCCTCAGGGGGCCTGCCTTCT...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGAGATCGTGGCTATTTCTaGTCCAGCCTCAGGCACTCT +
Preference number: 4 (lower is better)
Translates to: GRWARENGTWPQSSCGVRDRGYF*SSLRHS
Trigger: AGAGTGCCTGAGGCTGGATCAGAAATAGCCACGATC...TCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566428.5
CDS-3UTR GCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCGCCTGGAGGGGAGGCTaGCTAGAGGGGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLAWRGG*LEGSPA
Trigger: TGCTGGGCTCCCCTCTAGGCAGCCTCCCCTCCAGGC...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTGCCTGGAGGGGAGGCTaGCTAGAGGGGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGAWRGG*LEGSPA
Trigger: TGCTGGGCTCCCCTCTAGGCAGCCTCCCCTCCAGGC...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGAGACACACTTGGAGTTaGAGCGCTGGGCACTCACGT +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGRHTWS*SAGHSR
Trigger: ACGTGAGTGCCCAGCGCTGCAACTCCAAGTGTGTCT...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGGTGAATGTGCCCAGCTaGCCGAAGGTGATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGVNVPS*PKVMFS
Trigger: CGAGAACATCACCTTCGGGCAGCTGGGCACATTCAC...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCAAGGCCAGCATGTTGTaGGTGAATGTGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGPGRMAHGLSPPAECDLKASML*VNVPSC
Trigger: GCAGCTGGGCACATTCACGCACAACATGCTGGCCTT...GAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGGCTCTTCATCCAGGTTaGCAATCACAGCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSAALHPG*QSQPAS
Trigger: AGAAGCAGGCTGTGATTGGCAACCTGGATGAAGAGC...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCAGTGGCTCTGGGTGCTaGTGGCTTCATGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGSGSGC*WLHAGH
Trigger: ATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACT...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCAGGAGTGGCTCTGGGTaGTGCTGGCTTCATGCAGGT +
Preference number: 4 (lower is better)
Translates to: EWLWVLLASCRSSGGVTARSGSG*CWLHAG
Trigger: ACCTGCATGAAGCCAGCAGCACCCAGAGCCACTCCT...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCCTTTCCTGTGCTTCTTaGGAGGGACACACAGCACAA +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCLSCAS*EGHTAQ
Trigger: TTGTGCTGTGTGTCCCTCGCAAGAAGCACAGGAAAG...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGCCGTGGCTGGACGCTaGAGGAGGTGTGTATTATCT +
Preference number: 4 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWAVAGR*RRCVLS
Trigger: AGATAATACACACCTCCTGCAGCGTCCAGCCACGGC...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCCGTGGCTGGACGCTaGAGGAGGTGTGTATTATCT +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGAVAGR*RRCVLS
Trigger: AGATAATACACACCTCCTGCAGCGTCCAGCCACGGC...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATCAAGGAGGAGAGCAGTaGCCTGGAGCCGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDQGGEQ*PGAVAG
Trigger: TCCAGCCACGGCTCCAGGGCACTGCTCTCCTCCTTG...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGTCCTTCCAGAGGCTGTaGACAAGCTCTCCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGSFQRL*TSSPAF
Trigger: GAACGCTGGAGAGCTTGTGCACAGCCTCTGGAAGGA...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTTCCAGAGCCACTGCCTaGTCTGCTCACAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: LGPGEWHMASVLLRSATSSRATA*SAHSTR
Trigger: CCTTGTGCTGTGAGCAGAGCAGGCAGTGGCTCTGGA...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCTTTGGGCATTCTGCCTaGTGGGACTGGGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGFGHSA*WDWEPL
Trigger: GAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGCTGGGGCTGGGCCACTaGCACCCTGCGAGCATCCCT +
Preference number: 4 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRLGLGH*HPASIP
Trigger: AGGGATGCTCGCAGGGTGGCAGTGGCCCAGCCCCAG...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGAGTGACTGCTGGCCCCGTCAGTAAGAGGGTGACGGGAAGCCGCGGGCTCGGCTACCAGATGGGCTGTTaGTTCAGGTGCGTGTACAGG +
Preference number: 4 (lower is better)
Translates to: GVTAGPVSKRVTGSRGLGYQMGC*FRCVYR
Trigger: CCTGTACACGCACCTGAAGCAACAGCCCATCTGGTA...GCCGAGCCCGCGGCTTCCCGTCACCCTCTTACTGACGGGGCCAGCAGTCACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp CGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTAGGGTCTCTTCATCCTaGGTAGACTCGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RWARENGTWPQSSCGVRPRVSSS*VDSVLW
Trigger: CCAGAGCACCGAGTCTACCCAGGATGAAGAGACCCT...AGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTTTGGAGTTGCAGCGCTaGGCACTCACGTATCGAGCA +
Preference number: 4 (lower is better)
Translates to: RWARENGTWPQSSCGVRPLELQR*ALTYRA
Trigger: TGCTCGATACGTGAGTGCCCAGCGCTGCAACTCCAA...AGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCCGGGGGCAGCAGCTGTaGTTTTCCGATGTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGRGQQL*FSDVVV
Trigger: TACTACCACATCGGAAAACCACAGCTGCTGCCCCCG...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATCTTCCTCGTTCCTCCTaGCCAGGGGCCCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDLPRSS*PGAPSA
Trigger: AGCTGAAGGGGCCCCTGGCCAGGAGGAACGAGGAAG...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTCTGGGCCGCTTCTCCTaGGGTTTGTTCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LGPGEWHMASVLLRSATSLGRFS*GLFSSS
Trigger: GGAAGACGAGAACAAACCCCAGGAGAAGCGGCCCAG...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCCTGGGGCCTACTCAGTaGCCATTTGCTCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: ALGPGEWHMASVLLRSATLGPTQ*PFAQCG
Trigger: ACCACATTGAGCAAATGGCCACTGAGTAGGCCCCAG...GGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGACTTTGGCACATGGATaGGGGTCGCAGACACAGGCA +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGTLAHG*GSQTQA
Trigger: TGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGT...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACGCCACCCACCGTGAGTaGCAGCGCCGGCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDATHRE*QRRPST
Trigger: GGTGGAGGGCCGGCGCTGCCACTCACGGTGGGTGGC...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCGGAGCTACAAAGGTCTaGTGGGGAAGGGGCCCAATG +
Preference number: 4 (lower is better)
Translates to: EWLWVLLASCRSSGGVTAGATKV*WGRGPM
Trigger: CATTGGGCCCCTTCCCCACCAGACCTTTGTAGCTCC...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTCTCAGGCGTTTCTGTaGTACTCACAAACAAGACGG +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSSQAFL*YSQTRR
Trigger: CCGTCTTGTTTGTGAGTACCACAGAAACGCCTGAGA...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCGGGCATTCTGCCTGCTaGGACTGGGAACCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASGHSAC*DWEPLP
Trigger: AGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCC...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCTCGTGCTCCTGGTTTTaGGCATTCTGCCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGSCSWF*AFCLLG
Trigger: TCCCAGCAGGCAGAATGCCCAAAACCAGGAGCACGA...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGACAGAGCTCAGAAACTaGACTCTCCCTCTAGCCATT +
Preference number: 4 (lower is better)
Translates to: DGRALGPGEWHMASVLLRTELRN*TLPLAI
Trigger: AATGGCTAGAGGGAGAGTCCAGTTTCTGAGCTCTGT...CCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGACTCCTCAGCATTACTaGGCTGGGAGGAGTGAGCGA +
Preference number: 4 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWTPQHY*AGRSER
Trigger: TCGCTCACTCCTCCCAGCCCAGTAATGCTGAGGAGT...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGAATGGCTCAGTGGGACTaGAAACGGGACAGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: GRWARENGTWPQSSCGVRMAQWD*KRDRKR
Trigger: CCTTTTCCTGTCCCGTTTCCAGTCCCACTGAGCCAT...TCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGGGTGCGTGGCCTGTGTaGCTCCGGGAAGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRGAWPV*LREALL
Trigger: GAGCAGGGCTTCCCGGAGCCACACAGGCCACGCACC...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGATTCCGTCCCTTTCCTaGAGAGCATGTGATACCCAG +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVIPSLS*RACDTQ
Trigger: CTGGGTATCACATGCTCTCCAGGAAAGGGACGGAAT...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCCACGGCCACCCACCGTaGGTGGCAGCGCCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: APDTHSVIQPICSTDCCLHGHPP*VAAPAL
Trigger: GAGGGCCGGCGCTGCCACTCACGGTGGGTGGCCGTG...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCCAGTGGCCGGGTAAGTaGCTCTCAGGCGTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTQWPGK*LSGVSV
Trigger: CACAGAAACGCCTGAGAGTCACTTACCCGGCCACTG...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGTGGACAGTCAGCCCTTaGGTGTGGCCTGAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: WARENGTWPQSSCGVRPLWTVSP*VWPEFH
Trigger: GTGAAACTCAGGCCACACTCAAGGGCTGACTGTCCA...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGATGGTTCAGCAGAAGTaGATGGCTCAGTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGMVQQK*MAQWDW
Trigger: CCAGTCCCACTGAGCCATTCACTTCTGCTGAACCAT...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCGGAGCGCTGTCCCACTaGAATCCCGTGGCCACGTGC +
Preference number: 4 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLGALSH*NPVATC
Trigger: GCACGTGGCCACGGGATTTCAGTGGGACAGCGCTCC...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGAGTGCACTCAGGCTCTaGCTGTTTTGTCAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGSALRL*LFCQVP
Trigger: TGGGACCTGACAAAACAGTCAGAGCCTGAGTGCACT...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCAAGTTGCCAGTAACTaGCGGCTACCAAGAATGAGT +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVQVASN*RLPRMS
Trigger: ACTCATTCTTGGTAGCCGGCAGTTACTGGCAACTTG...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGGCCTGGAGGGGAGGCTaGCTAGAGGGGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWAWRGG*LEGSPA
Trigger: TGCTGGGCTCCCCTCTAGGCAGCCTCCCCTCCAGGC...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTTGCCAGATGGGCTGTTaGTTCAGGTGCGTGTACAGG +
Preference number: 4 (lower is better)
Translates to: LGPGEWHMASVLLRSATSCQMGC*FRCVYR
Trigger: CCTGTACACGCACCTGAAGCAACAGCCCATCTGGCA...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTAAGGCCAGCATGTTGTaGGTGAATGTGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGPGEWHMASVLLRSATSKASML*VNVPSC
Trigger: GCAGCTGGGCACATTCACGCACAACATGCTGGCCTT...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCAGGAGTGGCTCTGGGTaGTGCTGGCTTCATGCAGGT +
Preference number: 4 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTRSGSG*CWLHAG
Trigger: ACCTGCATGAAGCCAGCAGCACCCAGAGCCACTCCT...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTCCTGCCTGCATCCCTTaGCCGCCCCCACCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: STLFLETLLGSLAVLWSGPACIP*PPPPSP
Trigger: TGGCGAGGGTGGGGGCGGGCAAGGGATGCAGGCAGG...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGACTGGGTGTGCCGGCTaGAGCCCCACCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRTGCAG*SPTSWL
Trigger: CAGCCATGAGGTGGGGCTGCAGCCGGCACACCCAGT...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGAGCTCCCGGGCCGTCTaGAGGCACACACACGTCCCT +
Preference number: 4 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRSSRAV*RHTHVP
Trigger: AGGGACGTGTGTGTGCCTGCAGACGGCCCGGGAGCT...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCGCCACTGGCTTGCCCTaGACGTTGCACAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASATGLP*TLHRSA
Trigger: AGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGC...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGTTCCCAGGCAGTAAGTaGGAGGTGAAGGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWFPGSK*EVKGVS
Trigger: AGAGACTCCCTTCACCTCGCACTTACTGCCTGGGAA...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTCAACGAAGTCAGCGCTaGCTTTCCTTCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGPGEWHMASVLLRSATSQRSQR*LSFQRL
Trigger: CAGCCTCTGGAAGGAAAGGCAGCGCTGACTTCGTTG...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATCAGTGTGGCTGGGTCTaGTTGCTCTGCACCACAGCC +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDQCGWV*LLCTTA
Trigger: GGCTGTGGTGCAGAGCAAGCAGACCCAGCCACACTG...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATGGCTCCGGGAAGCCCTaGTCTGTCTGTGGTCTTAGC +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDGSGKP*SVCGLS
Trigger: GCTAAGACCACAGACAGAGCAGGGCTTCCCGGAGCC...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGGGCGGCACCCATCCTTaGGAGCCCATCGGTCACAGG +
Preference number: 4 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRGGTHP*EPIGHR
Trigger: CCTGTGACCGATGGGCTCGCAAGGATGGGTGCCGCC...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGCAAATCGTACTGTCCTaGAGGAGGGGTGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGQIVLS*RRGVEG
Trigger: CCCTTCTACACCCCTCCTGCAGGACAGTACGATTTG...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGAGGGCCATGTCTCTCTaGCCACACACAGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: WARENGTWPQSSCGVRPLRAMSL*PHTGGS
Trigger: TGAACCTCCTGTGTGTGGGCAGAGAGACATGGCCCT...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566428.5
CDS-3UTR CCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCGCTGGTGAGGCTGCCTaGAGGGGAGGCTGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLAGEAA*RGGCLE
Trigger: CTCTAGGCAGCCTCCCCTCCAGGCAGCCTCACCAGC...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCTGTCCGCAGACTCAGTaGTCTCACTCTCTGATGCAC +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGCPQTQ*SHSLMH
Trigger: GTGCATCAGAGAGTGAGACCACTGAGTCTGCGGACA...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCGAGGAACGGCGGTCTTaGTCCCAGGACGGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFEERRS*SQDGCE
Trigger: CTCGCACCCGTCCTGGGACCAAGACCGCCGTTCCTC...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCACTCGGTGCTCTGGTTaGAGGAGAAGGACTCGTTGG +
Preference number: 4 (lower is better)
Translates to: EWLWVLLASCRSSGGVTATRCSG*RRRTRW
Trigger: CCAACGAGTCCTTCTCCTCCAACCAGAGCACCGAGT...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCTCAGAGTGTGCCAGATaGGCTGTTGCTTCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: EWLWVLLASCRSSGGVTASECAR*AVASGA
Trigger: CGCACCTGAAGCAACAGCCCATCTGGCACACTCTGA...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGCTGGGGCCTACTCAGTaGCCATTTGCTCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGLGPTQ*PFAQCG
Trigger: ACCACATTGAGCAAATGGCCACTGAGTAGGCCCCAG...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGATGCAGGTCATCGGGTaGGGTGACGGCCGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWMQVIG*GDGRAL
Trigger: CAGCGCCCGGCCGTCACCCCACCCGATGACCTGCAT...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGGCCCACGATGGCCCATaGAGTCCTTCCCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRAHDGP*SPSPPP
Trigger: GGGAGGAGGGGAAGGACTCCATGGGCCATCGTGGGC...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTCCGGCCCTCCACCACTaGGTGTGCCGGCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCPALHH*VCRLQP
Trigger: GGGCTGCAGCCGGCACACCCAGTGGTGGAGGGCCGG...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTGCTGAGAGGGCTGGATaGGAGCCGCGTGTGCACCCA +
Preference number: 4 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGAERAG*EPRVHP
Trigger: TGGGTGCACACGCGGCTCCCATCCAGCCCTCTCAGC...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTCCCGGGCCCATGGGCTaGCCTGGAGTACCTGGTACA +
Preference number: 4 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGPGPMG*PGVPGT
Trigger: TGTACCAGGTACTCCAGGCCAGCCCATGGGCCCGGG...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCCAGCATGCAGGTGTTaGGGTCAGGCCCCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWPACRC*GQAPGP
Trigger: TGGGCCCGGGGCCTGACCCCAACACCTGCATGCTGG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGTCTCAGGCGTTTCTGTaGTACTCACAAACAAGACGG +
Preference number: 4 (lower is better)
Translates to: GDGRALGPGEWHMASVLLSQAFL*YSQTRR
Trigger: CCGTCTTGTTTGTGAGTACCACAGAAACGCCTGAGA...CAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGCCCCGTTCTGCAGTCTaGCAGCATATGGTCCAAATG +
Preference number: 4 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWPRSAV*QHMVQM
Trigger: CATTTGGACCATATGCTGCCAGACTGCAGAACGGGG...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCCCCCGTTCTGCAGTCTaGCAGCATATGGTCCAAATG +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGPRSAV*QHMVQM
Trigger: CATTTGGACCATATGCTGCCAGACTGCAGAACGGGG...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTTCTAAATGGATTCGGTaGAGACATGCCCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: RWARENGTWPQSSCGVRPSKWIR*RHARWG
Trigger: GCCCCAACGGGCATGTCTCCACCGAATCCATTTAGA...AGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGTCTAAATGGATTCGGTaGAGACATGCCCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGSKWIR*RHARWG
Trigger: GCCCCAACGGGCATGTCTCCACCGAATCCATTTAGA...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCAAGGAGAGCAGTGCCCTaGAGCCGTGGCTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPARRAVP*SRGWTL
Trigger: CAGCGTCCAGCCACGGCTCCAGGGCACTGCTCTCCT...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCGGCATCCTGTGTGGATaGAGCACAGAGGAGACCTTC +
Preference number: 4 (lower is better)
Translates to: EWLWVLLASCRSSGGVTAGILCG*STEETF
Trigger: GAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCC...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCAACACCCAGGTGGCCCTaGGTGTGCCCCTGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPATPRWP*VCPWCD
Trigger: GTCACACCAGGGGCACACCCAGGGCCACCTGGGTGT...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGGAGTTCTCTGGCCTGTaGTTAAACATGCGCATGCAC +
Preference number: 4 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDREFSGL*LNMRMH
Trigger: GTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCGGTTCCTGGGGTGCGTaGCCTGTGTGGCTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFGSWGA*PVWLRE
Trigger: TTCCCGGAGCCACACAGGCCACGCACCCCAGGAACC...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGGGCAGCAAGGGTTCCTaGGGTGCGTGGCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRGSKGS*GAWPVW
Trigger: CCACACAGGCCACGCACCCCAGGAACCCTTGCTGCC...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGATGTGCTTCTTCCATTTaGTGTCTCAGGCACCAACAC +
Preference number: 4 (lower is better)
Translates to: TAGRWARENGTWPQSSCGCASSI*CLRHQH
Trigger: GTGTTGGTGCCTGAGACACCAAATGGAAGAAGCACA...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCAGTCTGCAGATAAAGTaGGGAGCTGGGTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: AGPGRMAHGLSPPAECDLSLQIK*GAGFSP
Trigger: TGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACT...GAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTTCTTGCAGGGAGATCTaGAGTCCACCCCTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: LGPGEWHMASVLLRSATSSCREI*SPPLRA
Trigger: AGCCCTAAGGGGTGGACTCCAGATCTCCCTGCAAGA...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATAGTGTCCACGCACGGTaGAACAGAAGGCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDSVHAR*NRRLWT
Trigger: GGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACT...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCAGACACACATTCTGTaGTCCAACCAATCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDQTHIL*SNQSAA
Trigger: TGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTG...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCCAGACACACATTCTGTaGTCCAACCAATCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ALGPGEWHMASVLLRSATQTHIL*SNQSAA
Trigger: TGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTG...GGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGGCCTTCCTCCAACTCTaGGGAGCTAGATCTACAAGA +
Preference number: 4 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGAFLQL*GARSTR
Trigger: TCTTGTAGATCTAGCTCCTCAGAGTTGGAGGAAGGC...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGATGGTTCAGCAGAAGTaGATGGCTCAGTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: WARENGTWPQSSCGVRPLMVQQK*MAQWDW
Trigger: CCAGTCCCACTGAGCCATTCACTTCTGCTGAACCAT...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGGCAGGAGAACAGTCTTaGTGTGCTTCTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRAGEQS*CASSIW
Trigger: CCAAATGGAAGAAGCACATCAAGACTGTTCTCCTGC...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATTTCCTGGAGAGCATGTaGTACCCAGGCCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDFLESM*YPGPGM
Trigger: CATCCCTGGGCCTGGGTATCACATGCTCTCCAGGAA...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGTTCCATTTTCACTGCTaGAGTACTCTCCAAACTTGG +
Preference number: 4 (lower is better)
Translates to: DGRALGPGEWHMASVLLRFHFHC*STLQTW
Trigger: CCAAGTTTGGAGAGTACTGCAGCAGTGAAAATGGAA...CCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTTCAGGTAGGAGTCGATaGTGCCCGCGGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGSGRSR*CPRASP
Trigger: GGGAGAAGCCCGCGGGCAGCATCGACTCCTACCTGA...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTCTTCAGGAAGTCATTaGACAGCTTCTTGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSSSGSH*TASCSV
Trigger: GACTGAACAAGAAGCTGTGCAATGACTTCCTGAAGA...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGTTGCCAATCACAGCCTaGTTCTTCAGGAAGTCATTG +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSALPITA*FFRKSL
Trigger: CAATGACTTCCTGAAGAAGCAGGCTGTGATTGGCAA...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTACCTCATGGCTGTCCTaGCTGCATCCCTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGTSWLS*LHPLPA
Trigger: GGCGGGCAAGGGATGCAGGCAGGACAGCCATGAGGT...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCACGGTCTGTGTGGTCTaGCGCGGACACCTCGGCACT +
Preference number: 4 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFTVCVV*RGHLGT
Trigger: AGTGCCGAGGTGTCCGCGGCAGACCACACAGACCGT...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCAAGAGCAGCACTGTTTaGTTTCAGAAAGGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: PGAGPGRMAHGLSPPAECKSSTV*FQKGWL
Trigger: CAACCACCCTTTCTGAAAGCAAACAGTGCTGCTCTT...GCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCAAGAGCAGCACTGTTTaGTTTCAGAAAGGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCKSSTV*FQKGWL
Trigger: CAACCACCCTTTCTGAAAGCAAACAGTGCTGCTCTT...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCTTTGGGCATTCTGCCTaGTGGGACTGGGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASFGHSA*WDWEPL
Trigger: GAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCTGGTTTTGGGCATTCTaGCTGCTGGGACTGGGAACC +
Preference number: 4 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASWFWAF*LLGLGT
Trigger: GGTTCCCAGTCCCAGCAGGCAGAATGCCCAAAACCA...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCGATGACAGGCCTTCGTaGTCCTGGTTTTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: EWLWVLLASCRSSGGVTADDRPS*SWFWAF
Trigger: GAATGCCCAAAACCAGGAGCACGAAGGCCTGTCATC...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGGAGCATCCCTTCCTCTaGAGAAAGGGACCCTCTAAT +
Preference number: 4 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGEHPFL*RKGPSN
Trigger: ATTAGAGGGTCCCTTTCTGCAGAGGAAGGGATGCTC...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGGGCGGCACCCATCCTTaGGAGCCCATCGGTCACAGG +
Preference number: 4 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWGGTHP*EPIGHR
Trigger: CCTGTGACCGATGGGCTCGCAAGGATGGGTGCCGCC...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCCCAGTTCTAGTCAATaGACAGGGGATTTACTGACA +
Preference number: 4 (lower is better)
Translates to: WGDGRALGPGEWHMASVLPSSSQ*TGDLLT
Trigger: TGTCAGTAAATCCCCTGTGCATTGACTAGAACTGGG...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGCCTCTGGGGTCTCCATaGCTCAGGGGAGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QCPRTVKQKALDPACRCWPLGSP*LRGAAG
Trigger: ACCAGCAGCTCCCCTGAGCCATGGAGACCCCAGAGG...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCCTGGGGCCTACTCAGTaGCCATTTGCTCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: EWLWVLLASCRSSGGVTALGPTQ*PFAQCG
Trigger: ACCACATTGAGCAAATGGCCACTGAGTAGGCCCCAG...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCCAGAGGCCACGCCACTaGCTTGCCCTGCACGTTGCA +
Preference number: 4 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFQRPRH*LALHVA
Trigger: TGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTG...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCGCCCATGGGCTGGCCTaGAGTACCTGGTACAGACCC +
Preference number: 4 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFAHGLA*STWYRP
Trigger: GGGTCTGTACCAGGTACTCCAGGCCAGCCCATGGGC...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACACAGGCCCCGGGCCCATaGGCTGGCCTGGAGTACCTG +
Preference number: 4 (lower is better)
Translates to: AEQPREKRISQLQPSFLTQAPGP*AGLEYL
Trigger: CAGGTACTCCAGGCCAGCCCATGGGCCCGGGGCCTG...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACTGTATTATCTGCAGTTaGCATCAGAGCGAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDCIICS*HQSEGC
Trigger: ACACCCCTCGCTCTGATGCCAACTGCAGATAATACA...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCGAGTTCTCTGGCCTGTaGTTAAACATGCGCATGCAC +
Preference number: 4 (lower is better)
Translates to: AGPGRMAHGLSPPAECDLEFSGL*LNMRMH
Trigger: GTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC...GAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTCCAATGCGTGTTGCTTaGATTAACCTGAACATCAGG +
Preference number: 4 (lower is better)
Translates to: GRALGPGEWHMASVLLRSPMRVA*INLNIR
Trigger: CCTGATGTTCAGGTTAATCCAAGCAACACGCATTGG...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCCTCATGTCAGGGGTCTaGAATACCAAGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EWLWVLLASCRSSGGVTALMSGV*NTKCSR
Trigger: CCTGGAGCACTTGGTATTCCAGACCCCTGACATGAG...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACTCCTGTGGACGCAGCTaGGAAAAAGTGAAACCTATC +
Preference number: 4 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDSCGRS*EKVKPI
Trigger: GATAGGTTTCACTTTTTCCCAGCTGCGTCCACAGGA...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCCCCACTGAAATCCCGTaGCCACGTGCATCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFPTEIP*PRASPG
Trigger: GCCTGGGGATGCACGTGGCCACGGGATTTCAGTGGG...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGAGTCTGCAGATAAAGTaGGGAGCTGGGTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: WARENGTWPQSSCGVRPLSLQIK*GAGFSP
Trigger: TGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACT...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCCAGGCTCACCGGGATaGCAGGGACTCCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWPGSPG*QGLLPN
Trigger: GTTGGGGAGGAGTCCCTGCCATCCCGGTGAGCCTGG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 72 bp AGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTaGCACAGATCTGCTTCTCTCCAGCCACTGTCACTC +
Preference number: 4 (lower is better)
Translates to: RGRGHATGLPCT*HRSASLQPLSL
Trigger: GAGTGACAGTGGCTGGAGAGAAGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 72 bp TGCTCAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTaGCCCTGCACGTTGCACAGATCTGCTTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CSALRGRGHATG*PCTLHRSASLQ
Trigger: CTGGAGAGAAGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGCCCCGAAGAAGCCCTTaGCATTCTCAGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRPRRSP*HSQSWP
Trigger: CGGCCAGGACTGAGAATGTCAAGGGCTTCTTCGGGG...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCACCCCGAAGAAGCCCTTaGCATTCTCAGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPAPRRSP*HSQSWP
Trigger: CGGCCAGGACTGAGAATGTCAAGGGCTTCTTCGGGG...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGCCAGCATGTTGTGCGTaGATGTGCCCAGCTGCCCGA +
Preference number: 4 (lower is better)
Translates to: QCPRTVKQKALDPACRCWPACCA*MCPAAR
Trigger: TCGGGCAGCTGGGCACATTCACGCACAACATGCTGG...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCCAGACACACATTCTGTaGTCCAACCAATCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGPGRMAHGLSPPAECDLQTHIL*SNQSAA
Trigger: TGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTG...GAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGTCCAAATGCATCAGATaGCACCACGTTTCAGATAAT +
Preference number: 4 (lower is better)
Translates to: DGRALGPGEWHMASVLLRSKCIR*HHVSDN
Trigger: ATTATCTGAAACGTGGTGTCATCTGATGCATTTGGA...CCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGCCTTCCTCCAACTCTaGGGAGCTAGATCTACAAGA +
Preference number: 4 (lower is better)
Translates to: WARENGTWPQSSCGVRPLAFLQL*GARSTR
Trigger: TCTTGTAGATCTAGCTCCTCAGAGTTGGAGGAAGGC...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCAGTGCACTCAGGCTCTaGCTGTTTTGTCAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASSALRL*LFCQVP
Trigger: TGGGACCTGACAAAACAGTCAGAGCCTGAGTGCACT...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCCCCACCTCTATTTCATaGGCAAATCATCTAGGATTA +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSPTSIS*ANHLGL
Trigger: TAATCCTAGATGATTTGCTCATGAAATAGAGGTGGG...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTCAGTTTCTACCTTCTaGCAACTCAAGGTGCAATAT +
Preference number: 4 (lower is better)
Translates to: RPGAGPGRMAHGLSPPAESVSTF*QLKVQY
Trigger: ATATTGCACCTTGAGTTGTCAGAAGGTAGAAACTGA...CTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCGACTCCTAGGAGTGGAGCTGCTGGGTCACAGAGTAACTCTTGTGTTTCACCTGCCTGGAGGGGAGGCTaGCTAGAGGGGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ATPRSGAAGSQSNSCVSPAWRGG*LEGSPA
Trigger: TGCTGGGCTCCCCTCTAGGCAGCCTCCCCTCCAGGC...AGGTGAAACACAAGAGTTACTCTGTGACCCAGCAGCTCCACTCCTAGGAGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR GCA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCTTCCATTTTCACTGCTaGAGTACTCTCCAAACTTGG +
Preference number: 4 (lower is better)
Translates to: WGDGRALGPGEWHMASVLFHFHC*STLQTW
Trigger: CCAAGTTTGGAGAGTACTGCAGCAGTGAAAATGGAA...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATCTCGAACAGCACCACTaGAAAAGACTGCACCAGGCG +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDLEQHH*KRLHQA
Trigger: CGCCTGGTGCAGTCTTTTGCAGTGGTGCTGTTCGAG...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCGACTCCTAGGAGTGGAGCTGCTGGGTCACAGAGTAACTCTTGTGTTTCACCTGGTAGGAGTCGATGCTaGCCGCGGGCTTCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: ATPRSGAAGSQSNSCVSPGRSRC*PRASPG
Trigger: CCCGGGAGAAGCCCGCGGGCAGCATCGACTCCTACC...AGGTGAAACACAAGAGTTACTCTGTGACCCAGCAGCTCCACTCCTAGGAGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR GCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATAAGGCCAGCATGTTGTaGGTGAATGTGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDKASML*VNVPSC
Trigger: GCAGCTGGGCACATTCACGCACAACATGCTGGCCTT...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCTCTTCAGGAAGTCATTaGACAGCTTCTTGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: WGDGRALGPGEWHMASVLSSGSH*TASCSV
Trigger: GACTGAACAAGAAGCTGTGCAATGACTTCCTGAAGA...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGAGTCCTCCTGCGGAGTaGGACCTCTGGGGCCTACTC +
Preference number: 4 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWSPPAE*DLWGLL
Trigger: GAGTAGGCCCCAGAGGTCGCACTCCGCAGGAGGACT...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGGTGCTGCTGGCTTCATaGAGGTCATCGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRVLLAS*RSSGGV
Trigger: CACCCCACCCGATGACCTGCATGAAGCCAGCAGCAC...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGCAACTCAGACTTTCCTaGCTTGTCTGGAATAAAGAG +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSAQLRLS*LVWNKE
Trigger: CTCTTTATTCCAGACAAGGCAGGAAAGTCTGAGTTG...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTGCCACGCCACTGGCTTaGCCTGCACGTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGATPLA*PARCTD
Trigger: ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGC...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATCAACGAAGTCAGCGCTaGCTTTCCTTCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDQRSQR*LSFQRL
Trigger: CAGCCTCTGGAAGGAAAGGCAGCGCTGACTTCGTTG...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGGTGGCTGGGTCTGCTTaGTCTGCACCACAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWVAGSA*SAPQPS
Trigger: GCTGGGCTGTGGTGCAGAGCAAGCAGACCCAGCCAC...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGAGAACAGTCTTGATGTaGTTCTTCCATTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: RPGAGPGRMAHGLSPPAERTVLM*FFHLVS
Trigger: AGACACCAAATGGAAGAAGCACATCAAGACTGTTCT...CTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCCAAATCGTACTGTCCTaGAGGAGGGGTGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTQIVLS*RRGVEG
Trigger: CCCTTCTACACCCCTCCTGCAGGACAGTACGATTTG...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGATCCCCTTTTTAAAGTaGAAAGTCCCTTATAGCGCT +
Preference number: 4 (lower is better)
Translates to: DGRALGPGEWHMASVLLRIPFLK*KVPYSA
Trigger: AGCGCTATAAGGGACTTTGCACTTTAAAAAGGGGAT...CCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGCCCAGTTCTAGTCAATaGACAGGGGATTTACTGACA +
Preference number: 4 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRPSSSQ*TGDLLT
Trigger: TGTCAGTAAATCCCCTGTGCATTGACTAGAACTGGG...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACGCTGGTGAGGCTGCCTaGAGGGGAGGCTGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDAGEAA*RGGCLE
Trigger: CTCTAGGCAGCCTCCCCTCCAGGCAGCCTCACCAGC...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGCCAGGGGAGAAGAGGTaGGTGCCTCAGGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: QCPRTVKQKALDPACRCWPGEKR*VPQAQS
Trigger: ACTTTGGGCCTGAGGCACCCACCTCTTCTCCCCTGG...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATAGGAGAAGGACTCGTTaGAGGAGGAACGGCGGTCTT +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDRRRTR*RRNGGL
Trigger: AAGACCGCCGTTCCTCCTCCAACGAGTCCTTCTCCT...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATAGGGTCTCTTCATCCTaGGTAGACTCGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDRVSSS*VDSVLW
Trigger: CCAGAGCACCGAGTCTACCCAGGATGAAGAGACCCT...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATCGGGGGCAGCAGCTGTaGTTTTCCGATGTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDRGQQL*FSDVVV
Trigger: TACTACCACATCGGAAAACCACAGCTGCTGCCCCCG...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGGCCATTTGCTCAATGTaGTCACTAAGCAGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: AGRWARENGTWPQSSCGVAICSM*SLSSLY
Trigger: ATACAAGCTGCTTAGTGACCACATTGAGCAAATGGC...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGCCATTTGCTCAATGTaGTCACTAAGCAGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: VTAGRWARENGTWPQSSCAICSM*SLSSLY
Trigger: ATACAAGCTGCTTAGTGACCACATTGAGCAAATGGC...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATCCGGCCCTCCACCACTaGGTGTGCCGGCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYPALHH*VCRLQP
Trigger: GGGCTGCAGCCGGCACACCCAGTGGTGGAGGGCCGG...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCCCCACAGCGGGAGACTaGGGAATAGTGAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFPTAGD*GIVRTS
Trigger: GCTGGTCCTCACTATTCCCCAGTCTCCCGCTGTGGG...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTTTCCTGCCTTGTCTaGAATAAAGAGCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDLSCLV*NKEQHC
Trigger: ACAGTGCTGCTCTTTATTCCAGACAAGGCAGGAAAG...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGTCTCAGGCGTTTCTGTaGTACTCACAAACAAGACGG +
Preference number: 4 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWSQAFL*YSQTRR
Trigger: CCGTCTTGTTTGTGAGTACCACAGAAACGCCTGAGA...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGAGCATGGTCACGGTCTaGCCAGCGGCATCGCTAGGC +
Preference number: 4 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWSMVTV*PAASLG
Trigger: GCCTAGCGATGCCGCTGGCCAGACCGTGACCATGCT...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCCTCATGTCAGGGGTCTaGAATACCAAGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTLMSGV*NTKCSR
Trigger: CCTGGAGCACTTGGTATTCCAGACCCCTGACATGAG...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGTCCTGTGGACGCAGCTaGGAAAAAGTGAAACCTATC +
Preference number: 4 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWSCGRS*EKVKPI
Trigger: GATAGGTTTCACTTTTTCCCAGCTGCGTCCACAGGA...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGTCCTGTGGACGCAGCTaGGAAAAAGTGAAACCTATC +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGSCGRS*EKVKPI
Trigger: GATAGGTTTCACTTTTTCCCAGCTGCGTCCACAGGA...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCCCACTGAAATCCCGTaGCCACGTGCATCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWPTEIP*PRASPG
Trigger: GCCTGGGGATGCACGTGGCCACGGGATTTCAGTGGG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACCACCCCCAGCCCCTGTaGGAGCGCTGTCCCACTGAA +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDHPQPL*ERCPTE
Trigger: TTCAGTGGGACAGCGCTCCCACAGGGGCTGGGGGTG...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATAAGACGGGACTTATCTaGCCGCATGTCAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDKTGLI*PHVRGG
Trigger: ACCTCCTCTGACATGCGGTCAGATAAGTCCCGTCTT...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGATCCAAATGCATCAGATaGCACCACGTTTCAGATAAT +
Preference number: 4 (lower is better)
Translates to: TAGRWARENGTWPQSSCGSKCIR*HHVSDN
Trigger: ATTATCTGAAACGTGGTGTCATCTGATGCATTTGGA...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGAGGGAGAGCCCCGCGGGCCTATTTCGCAGTCAGGGACCACGGCAGCGACAGGACACAACCCTCGCTCTaGCATTTCTCTAAATGGATT +
Preference number: 4 (lower is better)
Translates to: GGRAPRAYFAVRDHGSDRTQPSL*HFSKWI
Trigger: AATCCATTTAGAGAAATGTCAGAGCGAGGGTTGTGT...CCTGTCGCTGCCGTGGTCCCTGACTGCGAAATAGGCCCGCGGGGCTCTCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCAACACGAATAATGCATaGCTAAGAACGCTGACGACG +
Preference number: 4 (lower is better)
Translates to: AGPGRMAHGLSPPAECDLNTNNA*LRTLTT
Trigger: CGTCGTCAGCGTTCTTAGTCATGCATTATTCGTGTT...GAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCCAAGAATCATCAACATaGATACACGATTTACAGGAC +
Preference number: 4 (lower is better)
Translates to: GVTAGRWARENGTWPQSSQESST*IHDLQD
Trigger: GTCCTGTAAATCGTGTATTCATGTTGATGATTCTTG...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCCCCACCTCTATTTCATaGGCAAATCATCTAGGATTA +
Preference number: 4 (lower is better)
Translates to: PGAGPGRMAHGLSPPAECPTSIS*ANHLGL
Trigger: TAATCCTAGATGATTTGCTCATGAAATAGAGGTGGG...GCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGGGGAGAAGAGGTGGGTaGCTCAGGCCCAAAGTCGAT +
Preference number: 4 (lower is better)
Translates to: QCPRTVKQKALDPACRCWGRRGG*LRPKVD
Trigger: ATCGACTTTGGGCCTGAGGCACCCACCTCTTCTCCC...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGCTTTTCCATTTTCACTaGTGCAGTACTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: RALGPGEWHMASVLLRSALFHFH*CSTLQT
Trigger: AGTTTGGAGAGTACTGCAGCAGTGAAAATGGAAAAG...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTTTGCCAATCACAGCCTaGTTCTTCAGGAAGTCATTG +
Preference number: 4 (lower is better)
Translates to: RWARENGTWPQSSCGVRPLPITA*FFRKSL
Trigger: CAATGACTTCCTGAAGAAGCAGGCTGTGATTGGCAA...AGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTACCTCATGGCTGTCCTaGCTGCATCCCTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: STLFLETLLGSLAVLWSGTSWLS*LHPLPA
Trigger: GGCGGGCAAGGGATGCAGGCAGGACAGCCATGAGGT...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACACGGTCTGTGTGGTCTaGCGCGGACACCTCGGCACT +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDTVCVV*RGHLGT
Trigger: AGTGCCGAGGTGTCCGCGGCAGACCACACAGACCGT...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGAAGAGCAGCACTGTTTaGTTTCAGAAAGGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGKSSTV*FQKGWL
Trigger: CAACCACCCTTTCTGAAAGCAAACAGTGCTGCTCTT...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGAGGTGTGTATTATCTaGAGTTGGCATCAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: LGPGEWHMASVLLRSATSEVCII*SWHQSE
Trigger: CTCGCTCTGATGCCAACTGCAGATAATACACACCTC...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGAGCTCATGCCTGCTCTaGCCAGGTCCTGGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWSSCLL*PGPGGR
Trigger: TCTTCCCCCAGGACCTGGGCAGAGCAGGCATGAGCT...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATGAGTTCAGGCTGCAGTaGACTCAGGCTCTGACTGTT +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDEFRLQ*TQALTV
Trigger: AACAGTCAGAGCCTGAGTGCACTGCAGCCTGAACTC...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTCTGCACCTCCCAGAGTaGATGCGGTCGTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCLHLPE*MRSSPT
Trigger: GGTGGGGGACGACCGCATGCACTCTGGGAGGTGCAG...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCCAGGGGAGAAGAGGTaGGTGCCTCAGGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWPGEKR*VPQAQS
Trigger: ACTTTGGGCCTGAGGCACCCACCTCTTCTCCCCTGG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACAGAGGAACGGCGGTCTTaGTCCCAGGACGGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: AEQPREKRISQLQPSFLTEERRS*SQDGCE
Trigger: CTCGCACCCGTCCTGGGACCAAGACCGCCGTTCCTC...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCCCTCTGAGACACACTTaGAGTTGCAGCGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLPLRHT*SCSAGH
Trigger: GTGCCCAGCGCTGCAACTCCAAGTGTGTCTCAGAGG...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTACGCGGTCACAGCCCTaGGCCGCTTCTCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCTRSQP*AASPGV
Trigger: AACCCCAGGAGAAGCGGCCCAGGGCTGTGACCGCGT...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATGTGACGGCCGGGCGCTaGGCCCGGGAGAATGGCACA +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYVTAGR*ARENGT
Trigger: TGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCCCACAGCGGGAGACTaGGGAATAGTGAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWPTAGD*GIVRTS
Trigger: GCTGGTCCTCACTATTCCCCAGTCTCCCGCTGTGGG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGTGGAGACATGCCCGTTaGGGCCCAATGATGGGGGAA +
Preference number: 4 (lower is better)
Translates to: QCPRTVKQKALDPACRCWWRHAR*GPMMGE
Trigger: TTCCCCCATCATTGGGCCCCAACGGGCATGTCTCCA...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACACCCTGGAGCCGTGGCTaGACGCTGCAGGAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: AEQPREKRISQLQPSFLTPWSRG*TLQEVC
Trigger: ACACACCTCCTGCAGCGTCCAGCCACGGCTCCAGGG...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCCTCCGGCATCCTGTGTaGATGGAGCACAGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLLRHPV*MEHRGD
Trigger: GTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAG...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTTCTCCTACACCCAGGTaGCCCTGGGTGTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCSPTPR*PWVCPW
Trigger: CCAGGGGCACACCCAGGGCCACCTGGGTGTAGGAGA...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACATCTCCTACACCCAGGTaGCCCTGGGTGTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: AEQPREKRISQLQPSFLTSPTPR*PWVCPW
Trigger: CCAGGGGCACACCCAGGGCCACCTGGGTGTAGGAGA...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGCCAATGCGTGTTGCTTaGATTAACCTGAACATCAGG +
Preference number: 4 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWPMRVA*INLNIR
Trigger: CCTGATGTTCAGGTTAATCCAAGCAACACGCATTGG...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCTGTGCTTCTTCCATTTaGTGTCTCAGGCACCAACAC +
Preference number: 4 (lower is better)
Translates to: EWLWVLLASCRSSGGVTACASSI*CLRHQH
Trigger: GTGTTGGTGCCTGAGACACCAAATGGAAGAAGCACA...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGCTTCCGGGCCAGTGTTaGCCGCAGGAGAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRLPGQC*PQENSL
Trigger: AAGACTGTTCTCCTGCGGCCAACACTGGCCCGGAAG...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGTCACAGCAGCTCACCTaGCCCTACGGCATCTCTCAC +
Preference number: 4 (lower is better)
Translates to: QCPRTVKQKALDPACRCWSQQLT*PYGISH
Trigger: GTGAGAGATGCCGTAGGGCCAGGTGAGCTGCTGTGA...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538274.5
CDS-3UTR CCA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTCAAACTGGACGATCGTaGCTATTTCTGATCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LGPGEWHMASVLLRSATSQTGRS*LFLIQP
Trigger: AGGCTGGATCAGAAATAGCCACGATCGTCCAGTTTG...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566428.5
CDS-3UTR TCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTAGTGGTCTCACTCTCTaGTGCACCGTCCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: STLFLETLLGSLAVLWSGSGLTL*CTVPQG
Trigger: TCCCTGGGGGACGGTGCATCAGAGAGTGAGACCACT...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACCCCCGAAGAAGCCCTTaGCATTCTCAGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDPRRSP*HSQSWP
Trigger: CGGCCAGGACTGAGAATGTCAAGGGCTTCTTCGGGG...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCTTCTTTCCTCACAACTaGACTCCTCAGCATTACTGG +
Preference number: 4 (lower is better)
Translates to: EWLWVLLASCRSSGGVTAFFPHN*TPQHYW
Trigger: CCAGTAATGCTGAGGAGTTCAGTTGTGAGGAAAGAA...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACTGTGGCTGCGGAAACTaGGGAGGGACCAGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDCGCGN*GGTSLR
Trigger: TCTGAGGCTGGTCCCTCCTCAGTTTCCGCAGCCACA...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATAGAAGGCAGGCCCCCTaGGGGCCTGTATGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYRRQAP*GPVWRA
Trigger: CGCCCTCCATACAGGCCCTCAGGGGGCCTGCCTTCT...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGAGGATGCACGGGGGACTaGGGCGCAGAAGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGGCTGD*GAEGRP
Trigger: GGGCCTGCCTTCTGCGCCTCAGTCCCCCGTGCATCC...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAAGCCGTCAGACTCGGCTaGTGCGGCGACTGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQAVRLG*CGDCAA
Trigger: GGCGGCGCAGTCGCCGCAGCAGCCGAGTCTGACGGC...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258180.7
ENST00000538274.5
CDS-3UTR GCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATGAGCCATCGCCGTCCTaGAGCACAGGGGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYEPSPS*STGGGA
Trigger: GGCACCACCCCCTGTGCTGCAGGACGGCGATGGCTC...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCGGCCAGCCAGCTGTTTaGGGATTTCAGGTAGGAGTC +
Preference number: 4 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLGQPAV*GFQVGV
Trigger: GACTCCTACCTGAAATCCGCAAACAGCTGGCTGGCC...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCTGCCAGATGGGCTGTTaGTTCAGGTGCGTGTACAGG +
Preference number: 4 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLCQMGC*FRCVYR
Trigger: CCTGTACACGCACCTGAAGCAACAGCCCATCTGGCA...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGTCTTCAGGAAGTCATTaGACAGCTTCTTGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: GPGEWHMASVLLRSATSGSSGSH*TASCSV
Trigger: GACTGAACAAGAAGCTGTGCAATGACTTCCTGAAGA...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGTTGCCAATCACAGCCTaGTTCTTCAGGAAGTCATTG +
Preference number: 4 (lower is better)
Translates to: WARENGTWPQSSCGVRPLLPITA*FFRKSL
Trigger: CAATGACTTCCTGAAGAAGCAGGCTGTGATTGGCAA...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCCGCGTGTGCACCCATTaGAGGGAAGGTGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: APDTHSVIQPICSTDCCLRVCTH*REGGPR
Trigger: CCGTGGGCCACCTTCCCTGCAATGGGTGCACACGCG...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACCCGGCTCCCCCGTTCTaGAGTCTGGCAGCATATGGT +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDPAPPF*SLAAYG
Trigger: ACCATATGCTGCCAGACTGCAGAACGGGGGAGCCGG...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACAGCTCATGCCTGCTCTaGCCAGGTCCTGGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDSSCLL*PGPGGR
Trigger: TCTTCCCCCAGGACCTGGGCAGAGCAGGCATGAGCT...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTGGGCGGCAGAGTGCCTaGAATGGCCCCATGGATGAC +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCGRQSA*NGPMDD
Trigger: GTCATCCATGGGGCCATTGCAGGCACTCTGCCGCCC...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACGGCTCCGGGAAGCCCTaGTCTGTCTGTGGTCTTAGC +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDGSGKP*SVCGLS
Trigger: GCTAAGACCACAGACAGAGCAGGGCTTCCCGGAGCC...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTAAAGCAGAGGGCGTGTaGATGGGAGACGCCACTGAT +
Preference number: 4 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGKAEGV*MGDATD
Trigger: ATCAGTGGCGTCTCCCATGCACACGCCCTCTGCTTT...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGAGATACTGGTGTCACTaGACGCCACTTGGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: QCPRTVKQKALDPACRCWRYWCH*TPLGGY
Trigger: GTAGCCCCCAAGTGGCGTGCAGTGACACCAGTATCT...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCACGGAGATCGTGCCTCTaGACTCCAGCCTGGGAAATA +
Preference number: 4 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPARRSCL*TPAWEI
Trigger: TATTTCCCAGGCTGGAGTGCAGAGGCACGATCTCCG...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566428.5
CDS-3UTR CCA 90 bp TTTTGTGAGGACATGTTTTTCTCTTGGGCGACTCCTAGGAGTGGAGCTGCTGGGGCTGGTGAGGCTGCCTaGAGGGGAGGCTGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: FCEDMFFSWATPRSGAAGAGEAA*RGGCLE
Trigger: CTCTAGGCAGCCTCCCCTCCAGGCAGCCTCACCAGC...CCCAGCAGCTCCACTCCTAGGAGTCGCCCAAGAGAAAAACATGTCCTCACAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACACCTCTGGGGTCTCCATaGCTCAGGGGAGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: AEQPREKRISQLQPSFLTPLGSP*LRGAAG
Trigger: ACCAGCAGCTCCCCTGAGCCATGGAGACCCCAGAGG...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTGTAGACTCGGTGCTCTaGTTGGAGGAGAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGVDSVL*LEEKDS
Trigger: CGAGTCCTTCTCCTCCAACCAGAGCACCGAGTCTAC...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCTGGGCCGCTTCTCCTaGGGTTTGTTCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWLGRFS*GLFSSS
Trigger: GGAAGACGAGAACAAACCCCAGGAGAAGCGGCCCAG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGTCAGAGTGTGCCAGATaGGCTGTTGCTTCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: QCPRTVKQKALDPACRCWSECAR*AVASGA
Trigger: CGCACCTGAAGCAACAGCCCATCTGGCACACTCTGA...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTGCGGAGTGCGACCTCTaGGGCCTACTCAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCAECDL*GLLSGH
Trigger: ATGGCCACTGAGTAGGCCCCAGAGGTCGCACTCCGC...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTCGGGAGAATGGCACATaGCCTCAGTCCTCCTGCGGA +
Preference number: 4 (lower is better)
Translates to: STLFLETLLGSLAVLWSGRENGT*PQSSCG
Trigger: TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCG...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGGTGACGGCCGGGCGCTaGGCCCGGGAGAATGGCACA +
Preference number: 4 (lower is better)
Translates to: AACQHVLFSKQGAFHLCEVTAGR*ARENGT
Trigger: TGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTACTTTGGCACATGGATaGGGGTCGCAGACACAGGCA +
Preference number: 4 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGTLAHG*GSQTQA
Trigger: TGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGT...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCACCCTCGCCAGCCCTTaGCCCACGATGGCCCATGGA +
Preference number: 4 (lower is better)
Translates to: APDTHSVIQPICSTDCCLTLASP*PTMAHG
Trigger: TCCATGGGCCATCGTGGGCCAAGGGCTGGCGAGGGT...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGATTTCCTCCCCTGAAATaGCTATTTCAAGAGTCTATG +
Preference number: 4 (lower is better)
Translates to: GRWARENGTWPQSSCGVRFPPLK*LFQESM
Trigger: CATAGACTCTTGAAATAGCCATTTCAGGGGAGGAAA...TCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATCCCTGGGTGTGCCCCTaGTGTGACACCTCCCCACGC +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYPWVCP*CDTSPR
Trigger: GCGTGGGGAGGTGTCACACCAGGGGCACACCCAGGG...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCAGGCCTTCGTGCTCCTaGTTTTGGGCATTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFRPSCS*FWAFCL
Trigger: CAGGCAGAATGCCCAAAACCAGGAGCACGAAGGCCT...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCGAGTTGTTTGCATTTTaGTTCACTAGGATTGGCACA +
Preference number: 4 (lower is better)
Translates to: ALGPGEWHMASVLLRSATELFAF*FTRIGT
Trigger: TGTGCCAATCCTAGTGAACCAAAATGCAAACAACTC...GGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTACTCCTCAGCATTACTaGGCTGGGAGGAGTGAGCGA +
Preference number: 4 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGTPQHY*AGRSER
Trigger: TCGCTCACTCCTCCCAGCCCAGTAATGCTGAGGAGT...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCTGTGCTTCTTCCATTTaGTGTCTCAGGCACCAACAC +
Preference number: 4 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASCASSI*CLRHQH
Trigger: GTGTTGGTGCCTGAGACACCAAATGGAAGAAGCACA...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCCAGAGGGCGTGTGCATaGGAGACGCCACTGATAGTT +
Preference number: 4 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFQRACA*ETPLIV
Trigger: AACTATCAGTGGCGTCTCCCATGCACACGCCCTCTG...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 72 bp TGGCTGGACGCTGCAGGAGGTGTGTATTATCTGCAGTaGGCATCAGAGCGAGGGGTGTCCACACAACCCTCG +
Preference number: 4 (lower is better)
Translates to: WLDAAGGVYYLQ*ASERGVSTQPS
Trigger: CGAGGGTTGTGTGGACACCCCTCGCTCTGATGCCAACTGCAGATAATACACACCTCCTGCAGCGTCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 72 bp GCGGCACCCATCCTTGCGAGCCCATCGGTCACAGGATaGATTCCGTCCCTTTCCTGGAGAGCATGTGATACC +
Preference number: 4 (lower is better)
Translates to: AAPILASPSVTG*IPSLSWRACDT
Trigger: GGTATCACATGCTCTCCAGGAAAGGGACGGAATCAATCCTGTGACCGATGGGCTCGCAAGGATGGGTGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCGCCACAGCCCCACGCTaGGAGGGCTGGATGGGAGCC +
Preference number: 4 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSATAPR*EGWMGA
Trigger: GGCTCCCATCCAGCCCTCTCAGCGTGGGGCTGTGGC...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGAAGACGGGACTTATCTaGCCGCATGTCAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: QCPRTVKQKALDPACRCWKTGLI*PHVRGG
Trigger: ACCTCCTCTGACATGCGGTCAGATAAGTCCCGTCTT...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCAACACGAATAATGCATaGCTAAGAACGCTGACGACG +
Preference number: 4 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTNTNNA*LRTLTT
Trigger: CGTCGTCAGCGTTCTTAGTCATGCATTATTCGTGTT...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTTGTGGCTGCGGAAACTaGGGAGGGACCAGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCCGCGN*GGTSLR
Trigger: TCTGAGGCTGGTCCCTCCTCAGTTTCCGCAGCCACA...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGTACAGGACAAGGGAGTaGGACGGCTGCATCCTAAGA +
Preference number: 4 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRYRTRE*DGCILR
Trigger: TCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTA...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCTACAGGACAAGGGAGTaGGACGGCTGCATCCTAAGA +
Preference number: 4 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFYRTRE*DGCILR
Trigger: TCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTA...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTAGAAGGCAGGCCCCCTaGGGGCCTGTATGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSARRQAP*GPVWRA
Trigger: CGCCCTCCATACAGGCCCTCAGGGGGCCTGCCTTCT...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCAGTGCACTCAGGCTCTaGCTGTTTTGTCAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLSALRL*LFCQVP
Trigger: TGGGACCTGACAAAACAGTCAGAGCCTGAGTGCACT...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCCCACCTCTATTTCATaGGCAAATCATCTAGGATTA +
Preference number: 4 (lower is better)
Translates to: RWARENGTWPQSSCGVRPPTSIS*ANHLGL
Trigger: TAATCCTAGATGATTTGCTCATGAAATAGAGGTGGG...AGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTTCAGTTTCTACCTTCTaGCAACTCAAGGTGCAATAT +
Preference number: 4 (lower is better)
Translates to: RWARENGTWPQSSCGVRPSVSTF*QLKVQY
Trigger: ATATTGCACCTTGAGTTGTCAGAAGGTAGAAACTGA...AGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTGGGAGAAGAGGTGGGTaGCTCAGGCCCAAAGTCGAT +
Preference number: 4 (lower is better)
Translates to: STLFLETLLGSLAVLWSGGRRGG*LRPKVD
Trigger: ATCGACTTTGGGCCTGAGGCACCCACCTCTTCTCCC...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CTCTTGTGTTTCACCTTTAAAGGAACTGCCAGACTGTTTCTCAGCGGCTGCTCAGAGCCATCGCCGTCCTaGAGCACAGGGGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LLCFTFKGTARLFLSGCSEPSPS*STGGGA
Trigger: GGCACCACCCCCTGTGCTGCAGGACGGCGATGGCTC...TGAGCAGCCGCTGAGAAACAGTCTGGCAGTTCCTTTAAAGGTGAAACACAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR GCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCCAGAACCTCAGAGTGTaGCAGATGGGCTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFQNLRV*QMGCCF
Trigger: GAAGCAACAGCCCATCTGGCACACTCTGAGGTTCTG...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCGTGGGAGCCAGGTCTTaGTCCAGCCGGCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: APDTHSVIQPICSTDCCLVGARS*SSRPRA
Trigger: TGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCAC...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGCAACTCAGACTTTCCTaGCTTGTCTGGAATAAAGAG +
Preference number: 4 (lower is better)
Translates to: WARENGTWPQSSCGVRPLQLRLS*LVWNKE
Trigger: CTCTTTATTCCAGACAAGGCAGGAAAGTCTGAGTTG...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTTCCAGAGCCACTGCCTaGTCTGCTCACAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: STLFLETLLGSLAVLWSGSRATA*SAHSTR
Trigger: CCTTGTGCTGTGAGCAGAGCAGGCAGTGGCTCTGGA...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGCAAATCGTACTGTCCTaGAGGAGGGGTGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRQIVLS*RRGVEG
Trigger: CCCTTCTACACCCCTCCTGCAGGACAGTACGATTTG...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGATCCCCTTTTTAAAGTaGAAAGTCCCTTATAGCGCT +
Preference number: 4 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWIPFLK*KVPYSA
Trigger: AGCGCTATAAGGGACTTTGCACTTTAAAAAGGGGAT...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTCCAGGGGAGAAGAGGTaGGTGCCTCAGGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCPGEKR*VPQAQS
Trigger: ACTTTGGGCCTGAGGCACCCACCTCTTCTCCCCTGG...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCAGTACTCTCCAAACTTaGCTTTCTCCTCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASSTLQT*LSPPDP
Trigger: TGGATCAGGAGGAGAAAGCCAAGTTTGGAGAGTACT...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACATCGTCGCGCTCCTCCTaGGTCATGTGGCACCACTTC +
Preference number: 4 (lower is better)
Translates to: AEQPREKRISQLQPSFLTSSRSS*VMWHHF
Trigger: GAAGTGGTGCCACATGACCCAGGAGGAGCGCGACGA...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGCCATTTGCTCAATGTaGTCACTAAGCAGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: WARENGTWPQSSCGVRPLAICSM*SLSSLY
Trigger: ATACAAGCTGCTTAGTGACCACATTGAGCAAATGGC...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCGCGGAGTGCGACCTCTaGGGCCTACTCAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: APDTHSVIQPICSTDCCLAECDL*GLLSGH
Trigger: ATGGCCACTGAGTAGGCCCCAGAGGTCGCACTCCGC...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAACAGGCCCCGGGCCCATaGGCTGGCCTGGAGTACCTG +
Preference number: 4 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQQAPGP*AGLEYL
Trigger: CAGGTACTCCAGGCCAGCCCATGGGCCCGGGGCCTG...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATTGTATTATCTGCAGTTaGCATCAGAGCGAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDCIICS*HQSEGC
Trigger: ACACCCCTCGCTCTGATGCCAACTGCAGATAATACA...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCGAAGAGAGGAAACCTTaGTGGCAGGTGGTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLEERKP*WQVVSP
Trigger: AGGGCTTACCACCTGCCACCAAGGTTTCCTCTCTTC...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGAGGCCTTCGTGCTCCTaGTTTTGGGCATTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWRPSCS*FWAFCL
Trigger: CAGGCAGAATGCCCAAAACCAGGAGCACGAAGGCCT...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTCACTACTGGGCTCCCTaGCTGTGCTGTGGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: STLFLETLLGSLAVLWSGHYWAP*LCCGLV
Trigger: AACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTG...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATCCAGGCTCACCGGGATaGCAGGGACTCCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYPGSPG*QGLLPN
Trigger: GTTGGGGAGGAGTCCCTGCCATCCCGGTGAGCCTGG...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCAGAGGGCGTGTGCATaGGAGACGCCACTGATAGTT +
Preference number: 4 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWQRACA*ETPLIV
Trigger: AACTATCAGTGGCGTCTCCCATGCACACGCCCTCTG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTTCCAAATGCATCAGATaGCACCACGTTTCAGATAAT +
Preference number: 4 (lower is better)
Translates to: LGPGEWHMASVLLRSATSSKCIR*HHVSDN
Trigger: ATTATCTGAAACGTGGTGTCATCTGATGCATTTGGA...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCACACAACCCTCGCTCTaGCATTTCTCTAAATGGATT +
Preference number: 4 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTTQPSL*HFSKWI
Trigger: AATCCATTTAGAGAAATGTCAGAGCGAGGGTTGTGT...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTTCACCTGACACTTCCTaGGTTTACGGAGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCSPDTS*VYGGAT
Trigger: GGTGGCCCCTCCGTAAACTCAGGAAGTGTCAGGTGA...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCCAAGAATCATCAACATaGATACACGATTTACAGGAC +
Preference number: 4 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGQESST*IHDLQD
Trigger: GTCCTGTAAATCGTGTATTCATGTTGATGATTCTTG...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACATTCCTGGAGAGCATGTaGTACCCAGGCCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: AEQPREKRISQLQPSFLTFLESM*YPGPGM
Trigger: CATCCCTGGGCCTGGGTATCACATGCTCTCCAGGAA...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACAGACACACTTGGAGTTaGAGCGCTGGGCACTCACGT +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDRHTWS*SAGHSR
Trigger: ACGTGAGTGCCCAGCGCTGCAACTCCAAGTGTGTCT...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCGGTAGGAGTCGATGCTaGCCGCGGGCTTCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSGRSRC*PRASPG
Trigger: CCCGGGAGAAGCCCGCGGGCAGCATCGACTCCTACC...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGGCTCTTCATCCAGGTTaGCAATCACAGCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRALHPG*QSQPAS
Trigger: AGAAGCAGGCTGTGATTGGCAACCTGGATGAAGAGC...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCGTGCTGCTGGCTTCATaGAGGTCATCGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: APDTHSVIQPICSTDCCLVLLAS*RSSGGV
Trigger: CACCCCACCCGATGACCTGCATGAAGCCAGCAGCAC...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACAGTGGCTCTGGGTGCTaGTGGCTTCATGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDSGSGC*WLHAGH
Trigger: ATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACT...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACGATTCGGTGGAGACATaGCCGTTGGGGCCCAATGAT +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDDSVET*PLGPND
Trigger: ATCATTGGGCCCCAACGGGCATGTCTCCACCGAATC...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATCAAGGAGGAGAGCAGTaGCCTGGAGCCGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYQGGEQ*PGAVAG
Trigger: TCCAGCCACGGCTCCAGGGCACTGCTCTCCTCCTTG...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTTCCAGAGCCACTGCCTaGTCTGCTCACAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCSRATA*SAHSTR
Trigger: CCTTGTGCTGTGAGCAGAGCAGGCAGTGGCTCTGGA...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTAGGTGGCCCTGGGTGTaGCCCTGGTGTGACACCTCC +
Preference number: 4 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSARWPWV*PWCDTS
Trigger: GGAGGTGTCACACCAGGGGCACACCCAGGGCCACCT...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCGAGCATCCCTTCCTCTaGAGAAAGGGACCCTCTAAT +
Preference number: 4 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFEHPFL*RKGPSN
Trigger: ATTAGAGGGTCCCTTTCTGCAGAGGAAGGGATGCTC...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACAAGTGAACGGAGATCGTaGCTCTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AEQPREKRISQLQPSFLTSERRS*LCTPAW
Trigger: CCAGGCTGGAGTGCAGAGGCACGATCTCCGTTCACT...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566428.5
CDS-3UTR CCA 90 bp TCTTCCACTGAGTTTCACGATGTTTCCCAGGTCTATCCCTGCTACAGCGTGGAGCCAGGGGAGAAGAGGTaGGTGCCTCAGGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SSTEFHDVSQVYPCYSVEPGEKR*VPQAQS
Trigger: ACTTTGGGCCTGAGGCACCCACCTCTTCTCCCCTGG...CTCCACGCTGTAGCAGGGATAGACCTGGGAAACATCGTGAAACTCAGTGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp ACAAGGTTTTGTGAGGACATGTTTTTCTCTTGGGCGACTCCTAGGAGTGGAGCTACGCGGTCACAGCCCTaGGCCGCTTCTCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: TRFCEDMFFSWATPRSGATRSQP*AASPGV
Trigger: AACCCCAGGAGAAGCGGCCCAGGGCTGTGACCGCGT...AGCTCCACTCCTAGGAGTCGCCCAAGAGAAAAACATGTCCTCACAAAACCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTCTCCGGCATCCTGTGTaGATGGAGCACAGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCLRHPV*MEHRGD
Trigger: GTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAG...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACTCTGCCTGCTGGGACTaGGAACCTCTCCCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDSACWD*EPLPRK
Trigger: TTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGA...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGAGTTGTTTGCATTTTaGTTCACTAGGATTGGCACA +
Preference number: 4 (lower is better)
Translates to: WARENGTWPQSSCGVRPLELFAF*FTRIGT
Trigger: TGTGCCAATCCTAGTGAACCAAAATGCAAACAACTC...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGAGGCAGCAAGGGTTCCTaGGGTGCGTGGCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGGSKGS*GAWPVW
Trigger: CCACACAGGCCACGCACCCCAGGAACCCTTGCTGCC...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTCTTCCGGGCCAGTGTTaGCCGCAGGAGAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCLPGQC*PQENSL
Trigger: AAGACTGTTCTCCTGCGGCCAACACTGGCCCGGAAG...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGACACCCCCAGCCCCTGTaGGAGCGCTGTCCCACTGAA +
Preference number: 4 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGHPQPL*ERCPTE
Trigger: TTCAGTGGGACAGCGCTCCCACAGGGGCTGGGGGTG...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTCCAGGCTCACCGGGATaGCAGGGACTCCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSAPGSPG*QGLLPN
Trigger: GTTGGGGAGGAGTCCCTGCCATCCCGGTGAGCCTGG...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACATGGACAGTCAGCCCTTaGGTGTGGCCTGAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: AEQPREKRISQLQPSFLTWTVSP*VWPEFH
Trigger: GTGAAACTCAGGCCACACTCAAGGGCTGACTGTCCA...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGCAAGAATCATCAACATaGATACACGATTTACAGGAC +
Preference number: 4 (lower is better)
Translates to: WARENGTWPQSSCGVRPLQESST*IHDLQD
Trigger: GTCCTGTAAATCGTGTATTCATGTTGATGATTCTTG...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTCATCGGTCACAGGATTaGTTCCGTCCCTTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: STLFLETLLGSLAVLWSGHRSQD*FRPFPG
Trigger: TCCAGGAAAGGGACGGAATCAATCCTGTGACCGATG...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CTCTTGTGTTTCACCTTTAAAGGAACTGCCAGACTGTTTCTCAGCGGCTGCTCAAGTGATCCCGGGGAGTaGCTGCTGGCCCCGTCAGTA +
Preference number: 4 (lower is better)
Translates to: LLCFTFKGTARLFLSGCSSDPGE*LLAPSV
Trigger: TACTGACGGGGCCAGCAGTCACTCCCCGGGATCACT...TGAGCAGCCGCTGAGAAACAGTCTGGCAGTTCCTTTAAAGGTGAAACACAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR GCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTGGCCAGCCAGCTGTTTaGGGATTTCAGGTAGGAGTC +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCGQPAV*GFQVGV
Trigger: GACTCCTACCTGAAATCCGCAAACAGCTGGCTGGCC...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTGTGAATGTGCCCAGCTaGCCGAAGGTGATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCVNVPS*PKVMFS
Trigger: CGAGAACATCACCTTCGGGCAGCTGGGCACATTCAC...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAAACTGGGTGTGCCGGCTaGAGCCCCACCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQTGCAG*SPTSWL
Trigger: CAGCCATGAGGTGGGGCTGCAGCCGGCACACCCAGT...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCCCTGAGTTTCACCGGTaGAAGGAGGAGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: APDTHSVIQPICSTDCCLPEFHR*KEESSA
Trigger: GGCACTGCTCTCCTCCTTGCACCGGTGAAACTCAGG...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATAGCCACTGCCTGCTCTaGTCACAGCACAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYSHCLL*SQHKGL
Trigger: CAGCCCCTTGTGCTGTGAGCAGAGCAGGCAGTGGCT...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCAAAAACATACCATGCTaGCTGTCAACATGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASKNIPC*LSTCPV
Trigger: AACAGGACATGTTGACAGGCAGCATGGTATGTTTTT...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGATGTGGTCTTAGCCTGTaGGAGCCAGGCGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGCGLSL*EPGGVQ
Trigger: CTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACA...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATAATCCCGTGGCCACGTaGATCCCCAGGCACAGCTAC +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYNPVAT*IPRHSY
Trigger: GTAGCTGTGCCTGGGGATGCACGTGGCCACGGGATT...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTGAGTTCAGGCTGCAGTaGACTCAGGCTCTGACTGTT +
Preference number: 4 (lower is better)
Translates to: STLFLETLLGSLAVLWSGEFRLQ*TQALTV
Trigger: AACAGTCAGAGCCTGAGTGCACTGCAGCCTGAACTC...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCATCCCCTTTTTAAAGTaGAAAGTCCCTTATAGCGCT +
Preference number: 4 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASIPFLK*KVPYSA
Trigger: AGCGCTATAAGGGACTTTGCACTTTAAAAAGGGGAT...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp ACAAGGTTTTGTGAGGACATGTTTTTCTCTTGGGCGACTCCTAGGAGTGGAGCTTCAGCAGTCACGCCCTaGTCCCCATTCCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: TRFCEDMFFSWATPRSGASAVTP*SPFPTL
Trigger: GAGGGTGGGGAATGGGGAGCAGGGCGTGACTGCTGA...AGCTCCACTCCTAGGAGTCGCCCAAGAGAAAAACATGTCCTCACAAAACCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAATCACAGCAGCTCACCTaGCCCTACGGCATCGCGGGC +
Preference number: 4 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAESQQLT*PYGIAG
Trigger: GCCCGCGATGCCGTAGGGCCAGGTGAGCTGCTGTGA...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258180.7
CDS-3UTR CCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCGCTGGTGAGGCTGCCTaGAGGGGAGGCTGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSAGEAA*RGGCLE
Trigger: CTCTAGGCAGCCTCCCCTCCAGGCAGCCTCACCAGC...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCAGCCACCACCATTTCCAGAACATTCTCTCACCCCATAAAGAAGCCCCATCCCAGGAGAAGGACTCGTTaGAGGAGGAACGGCGGTCTT +
Preference number: 4 (lower is better)
Translates to: AATTISRTFSHPIKKPHPRRRTR*RRNGGL
Trigger: AAGACCGCCGTTCCTCCTCCAACGAGTCCTTCTCCT...GGGATGGGGCTTCTTTATGGGGTGAGAGAATGTTCTGGAAATGGTGGTGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp CAGGAGAGCTCCAGTTTCTCCACATCCTCACCAACGCCTGTGAGTGTTCATCTTCCTCTGAGACACACTTaGAGTTGCAGCGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QESSSFSTSSPTPVSVHLPLRHT*SCSAGH
Trigger: GTGCCCAGCGCTGCAACTCCAAGTGTGTCTCAGAGG...AAGATGAACACTCACAGGCGTTGGTGAGGATGTGGAGAAACTGGAGCTCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp GCAGCCACCACCATTTCCAGAACATTCTCTCACCCCATAAAGAAGCCCCATCCCCGGGGGCAGCAGCTGTaGTTTTCCGATGTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: AATTISRTFSHPIKKPHPRGQQL*FSDVVV
Trigger: TACTACCACATCGGAAAACCACAGCTGCTGCCCCCG...GGGATGGGGCTTCTTTATGGGGTGAGAGAATGTTCTGGAAATGGTGGTGGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTCTTCCTCGTTCCTCCTaGCCAGGGGCCCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSALPRSS*PGAPSA
Trigger: AGCTGAAGGGGCCCCTGGCCAGGAGGAACGAGGAAG...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATTCGTCGCGCTCCTCCTaGGTCATGTGGCACCACTTC +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYSSRSS*VMWHHF
Trigger: GAAGTGGTGCCACATGACCCAGGAGGAGCGCGACGA...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACAACTTTGGCACATGGATaGGGGTCGCAGACACAGGCA +
Preference number: 4 (lower is better)
Translates to: AEQPREKRISQLQPSFLTTLAHG*GSQTQA
Trigger: TGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGT...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTCTCATCTCACAAGCCTaGCACTCGGGGTACAACTGG +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCLISQA*HSGYNW
Trigger: CCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAG...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCTGGAGACATGCCCGTTaGGGCCCAATGATGGGGGAA +
Preference number: 4 (lower is better)
Translates to: APDTHSVIQPICSTDCCLWRHAR*GPMMGE
Trigger: TTCCCCCATCATTGGGCCCCAACGGGCATGTCTCCA...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTGAGAGGAAACCTTGGTaGCAGGTGGTAAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCERKPW*QVVSPV
Trigger: GACAGGGCTTACCACCTGCCACCAAGGTTTCCTCTC...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACATCTGCCTGCTGGGACTaGGAACCTCTCCCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: AEQPREKRISQLQPSFLTSACWD*EPLPRK
Trigger: TTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGA...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGAGCGAGAGGCCTGTTTaGTTTCAACTCACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWSERPV*FQLTGR
Trigger: CCTTCCTGTGAGTTGAAACCAAACAGGCCTCTCGCT...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACGCTCCACACTGTTCTTaGAAACACTACTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDAPHCS*KHYWAP
Trigger: GGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGAGC...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGAACCTCGGCACTGCTGTaGCTCTGGCGGAGACACACA +
Preference number: 4 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGTSALL*LWRRHT
Trigger: TGTGTGTCTCCGCCAGAGTCACAGCAGTGCCGAGGT...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCTTCTTTCCTCACAACTaGACTCCTCAGCATTACTGG +
Preference number: 4 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLFFPHN*TPQHYW
Trigger: CCAGTAATGCTGAGGAGTTCAGTTGTGAGGAAAGAA...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTGCCTGGTGTCCCAGGTaGGTTAGTAGGAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSAAWCPR*VSRSPP
Trigger: TGGTGGGCTCCTACTAACGCACCTGGGACACCAGGC...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCTTCCACTGAGTTTCACGATGTTTCCCAGGTCTATCCCTGCTACAGCGTGGAGCTCGAACAGCACCACTaGAAAAGACTGCACCAGGCG +
Preference number: 4 (lower is better)
Translates to: SSTEFHDVSQVYPCYSVELEQHH*KRLHQA
Trigger: CGCCTGGTGCAGTCTTTTGCAGTGGTGCTGTTCGAG...CTCCACGCTGTAGCAGGGATAGACCTGGGAAACATCGTGAAACTCAGTGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR GCA 90 bp GGGCAATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCATTCAGGTAGGAGTCGATaGTGCCCGCGGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GQSVICCVSRNLQFWTFHSGRSR*CPRASP
Trigger: GGGAGAAGCCCGCGGGCAGCATCGACTCCTACCTGA...ATGAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR GCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTGCTCTTCATCCAGGTTaGCAATCACAGCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: STLFLETLLGSLAVLWSGALHPG*QSQPAS
Trigger: AGAAGCAGGCTGTGATTGGCAACCTGGATGAAGAGC...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTCTTTCCTGTGCTTCTTaGGAGGGACACACAGCACAA +
Preference number: 4 (lower is better)
Translates to: STLFLETLLGSLAVLWSGLSCAS*EGHTAQ
Trigger: TTGTGCTGTGTGTCCCTCGCAAGAAGCACAGGAAAG...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGGCCACGCCACTGGCTTaGCCTGCACGTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: AACQHVLFSKQGAFHLCEATPLA*PARCTD
Trigger: ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGC...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTCAGTGTGGCTGGGTCTaGTTGCTCTGCACCACAGCC +
Preference number: 4 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSAQCGWV*LLCTTA
Trigger: GGCTGTGGTGCAGAGCAAGCAGACCCAGCCACACTG...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACGAGCATCCCTTCCTCTaGAGAAAGGGACCCTCTAAT +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDEHPFL*RKGPSN
Trigger: ATTAGAGGGTCCCTTTCTGCAGAGGAAGGGATGCTC...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAATGTGGTCTTAGCCTGTaGGAGCCAGGCGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQCGLSL*EPGGVQ
Trigger: CTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACA...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGAGGCTCCGGGAAGCCCTaGTCTGTCTGTGGTCTTAGC +
Preference number: 4 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGGSGKP*SVCGLS
Trigger: GCTAAGACCACAGACAGAGCAGGGCTTCCCGGAGCC...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATAGAACAGTCTTGATGTaGTTCTTCCATTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDRTVLM*FFHLVS
Trigger: AGACACCAAATGGAAGAAGCACATCAAGACTGTTCT...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTTGTCCGCAGACTCAGTaGTCTCACTCTCTGATGCAC +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCCPQTQ*SHSLMH
Trigger: GTGCATCAGAGAGTGAGACCACTGAGTCTGCGGACA...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCAGGAGAAGGACTCGTTaGAGGAGGAACGGCGGTCTT +
Preference number: 4 (lower is better)
Translates to: APDTHSVIQPICSTDCCLRRRTR*RRNGGL
Trigger: AAGACCGCCGTTCCTCCTCCAACGAGTCCTTCTCCT...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTTTGTGAGGACATGTTTTTCTCTTGGGCGACTCCTAGGAGTGGAGCTGCTGGGACTCGGTGCTCTGGTTaGAGGAGAAGGACTCGTTGG +
Preference number: 4 (lower is better)
Translates to: FCEDMFFSWATPRSGAAGTRCSG*RRRTRW
Trigger: CCAACGAGTCCTTCTCCTCCAACCAGAGCACCGAGT...CCCAGCAGCTCCACTCCTAGGAGTCGCCCAAGAGAAAAACATGTCCTCACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCGTAGACTCGGTGCTCTaGTTGGAGGAGAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: APDTHSVIQPICSTDCCLVDSVL*LEEKDS
Trigger: CGAGTCCTTCTCCTCCAACCAGAGCACCGAGTCTAC...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGACGCGGTCACAGCCCTaGGCCGCTTCTCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: TRLQKCNREDTGVTARHLTRSQP*AASPGV
Trigger: AACCCCAGGAGAAGCGGCCCAGGGCTGTGACCGCGT...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAAGCGGAGTGCGACCTCTaGGGCCTACTCAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAEAECDL*GLLSGH
Trigger: ATGGCCACTGAGTAGGCCCCAGAGGTCGCACTCCGC...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAACTGGGCCCGGGAGAATaGCACATGGCCTCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAELGPGE*HMASVL
Trigger: GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCCTTTCCTGCCTTGTCTaGAATAAAGAGCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLLSCLV*NKEQHC
Trigger: ACAGTGCTGCTCTTTATTCCAGACAAGGCAGGAAAG...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCCAGAGGCCACGCCACTaGCTTGCCCTGCACGTTGCA +
Preference number: 4 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSQRPRH*LALHVA
Trigger: TGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTG...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATGGAGCTACAAAGGTCTaGTGGGGAAGGGGCCCAATG +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYGATKV*WGRGPM
Trigger: CATTGGGCCCCTTCCCCACCAGACCTTTGTAGCTCC...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCGCCCATGGGCTGGCCTaGAGTACCTGGTACAGACCC +
Preference number: 4 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSAHGLA*STWYRP
Trigger: GGGTCTGTACCAGGTACTCCAGGCCAGCCCATGGGC...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAAAGCACACTGGCAGCATaGTCACGGTCTGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAESTLAA*SRSGQR
Trigger: CCGCTGGCCAGACCGTGACCATGCTGCCAGTGTGCT...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATTTTCCTCCCCTGAAATaGCTATTTCAAGAGTCTATG +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDFPPLK*LFQESM
Trigger: CATAGACTCTTGAAATAGCCATTTCAGGGGAGGAAA...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCTTTGAGCAGTGTGGCTaGGTCTGCTTGCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: APDTHSVIQPICSTDCCLFEQCG*VCLLCT
Trigger: GGTGCAGAGCAAGCAGACCCAGCCACACTGCTCAAA...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AAACTTTCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAACACCCAGGTGGCCCTaGGTGTGCCCCTGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: KLSYKNPVHTGVSPVGTATPRWP*VCPWCD
Trigger: GTCACACCAGGGGCACACCCAGGGCCACCTGGGTGT...TGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGAAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGACACCCAGGTGGCCCTaGGTGTGCCCCTGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: TRLQKCNREDTGVTARHLTPRWP*VCPWCD
Trigger: GTCACACCAGGGGCACACCCAGGGCCACCTGGGTGT...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCTGTAGCTTCCAGCCCTaGCTTCCAGCTAAGGAACCC +
Preference number: 4 (lower is better)
Translates to: APDTHSVIQPICSTDCCLCSFQP*LPAKEP
Trigger: GGGTTCCTTAGCTGGAAGCCAGGGCTGGAAGCTACA...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACATTCCGTCCCTTTCCTaGAGAGCATGTGATACCCAG +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDIPSLS*RACDTQ
Trigger: CTGGGTATCACATGCTCTCCAGGAAAGGGACGGAAT...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 72 bp ACTTGTGTGAGTTGTTTGCATTTTGGTTCACTAGGATaGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: TCVSCLHFGSLG*AQPSRSGGRVP
Trigger: AGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAAATGCAAACAACTCACACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 72 bp GGCCGCAGGAGAACAGTCTTGATGTGCTTCTTCCATTaGGTGTCTCAGGCACCAACACATTCCTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRRRTVLMCFFH*VSQAPTHSCSW
Trigger: CCAGGAACAGGAATGTGTTGGTGCCTGAGACACCAAATGGAAGAAGCACATCAAGACTGTTCTCCTGCGGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATTGGACAGTCAGCCCTTaGGTGTGGCCTGAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYWTVSP*VWPEFH
Trigger: GTGAAACTCAGGCCACACTCAAGGGCTGACTGTCCA...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCTCTTCAGGAAGTCATTaGACAGCTTCTTGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLSSGSH*TASCSV
Trigger: GACTGAACAAGAAGCTGTGCAATGACTTCCTGAAGA...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATAGTGGCTCTGGGTGCTaGTGGCTTCATGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYSGSGC*WLHAGH
Trigger: ATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACT...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AAACTTTCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAACGGTCTGTGTGGTCTaGCGCGGACACCTCGGCACT +
Preference number: 4 (lower is better)
Translates to: KLSYKNPVHTGVSPVGTATVCVV*RGHLGT
Trigger: AGTGCCGAGGTGTCCGCGGCAGACCACACAGACCGT...TGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGAAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACGAGGTGTGTATTATCTaGAGTTGGCATCAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDEVCII*SWHQSE
Trigger: CTCGCTCTGATGCCAACTGCAGATAATACACACCTC...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCAGCCACTGCCTGCTCTaGTCACAGCACAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSSHCLL*SQHKGL
Trigger: CAGCCCCTTGTGCTGTGAGCAGAGCAGGCAGTGGCT...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TGTGTTTCACCTTTAAAGGAACTGCCAGACTGTTTCTCAGCGGCTGCTCATTTACTGCAGCACAGGGGGTaGTGCCTCCAGGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: CVSPLKELPDCFSAAAHLLQHRG*CLQGRR
Trigger: TCTTCTCCCCTGGAGGCACCACCCCCTGTGCTGCAG...TAAATGAGCAGCCGCTGAGAAACAGTCTGGCAGTTCCTTTAAAGGTGAAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp GTGTTCATCTTTTTATTCTGCCACTCTGGTGAGTGTGAGAATTCTGCCATTCTGGAGGAACGGCGGTCTTaGTCCCAGGACGGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: VFIFLFCHSGECENSAILEERRS*SQDGCE
Trigger: CTCGCACCCGTCCTGGGACCAAGACCGCCGTTCCTC...CAGAATGGCAGAATTCTCACACTCACCAGAGTGGCAGAATAAAAAGATGAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATACTCGGTGCTCTGGTTaGAGGAGAAGGACTCGTTGG +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYTRCSG*RRRTRW
Trigger: CCAACGAGTCCTTCTCCTCCAACCAGAGCACCGAGT...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTCCTCTGAGACACACTTaGAGTTGCAGCGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSAPLRHT*SCSAGH
Trigger: GTGCCCAGCGCTGCAACTCCAAGTGTGTCTCAGAGG...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCATAGGGCTTCCTCGTTCCTCCTaGCCAGGGGCCCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: NLSSAVSLGICSSGHFIGLPRSS*PGAPSA
Trigger: AGCTGAAGGGGCCCCTGGCCAGGAGGAACGAGGAAG...CCCTATGAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAACGGGAGAATGGCACATaGCCTCAGTCCTCCTGCGGA +
Preference number: 4 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQRENGT*PQSSCG
Trigger: TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCG...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AAACTTTCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCATGCAGCCCCACCTCATaGCTGTCCTGCCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: KLSYKNPVHTGVSPVGTACSPTS*LSCLHP
Trigger: GGGATGCAGGCAGGACAGCCATGAGGTGGGGCTGCA...TGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGAAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGATTCTCCAAGCAACCCTaGCCAGAGCCACTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGFSKQP*PEPLSA
Trigger: GGCTGACAGTGGCTCTGGCCAGGGTTGCTTGGAGAA...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCTCTTGGAAACACTACTaGGCTCCCTGGCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: APDTHSVIQPICSTDCCLSWKHY*APWLCC
Trigger: ACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGA...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACAATTCCGTCCCTTTCCTaGAGAGCATGTGATACCCAG +
Preference number: 4 (lower is better)
Translates to: AEQPREKRISQLQPSFLTIPSLS*RACDTQ
Trigger: CTGGGTATCACATGCTCTCCAGGAAAGGGACGGAAT...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATATCAATCAATCAAACTaGACGATCGTGGCTATTTCT +
Preference number: 4 (lower is better)
Translates to: QRLEAEATPLACPARCTDINQSN*TIVAIS
Trigger: AGAAATAGCCACGATCGTCCAGTTTGATTGATTGAT...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566428.5
CDS-3UTR TCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAAGCGGCATCGCTAGGCTaGGATCACTCATGCACCATG +
Preference number: 4 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAEAASLG*DHSCTM
Trigger: CATGGTGCATGAGTGATCTCAGCCTAGCGATGCCGC...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACAACACGAATAATGCATaGCTAAGAACGCTGACGACG +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDNTNNA*LRTLTT
Trigger: CGTCGTCAGCGTTCTTAGTCATGCATTATTCGTGTT...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAATCACCTGACACTTCCTaGGTTTACGGAGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQSPDTS*VYGGAT
Trigger: GGTGGCCCCTCCGTAAACTCAGGAAGTGTCAGGTGA...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACTTACGACATCAGAATTaGGTTCTCTGGCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDLRHQN*VLWPVV
Trigger: AACCACAGGCCAGAGAACTCAATTCTGATGTCGTAA...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGGAGAACGACCTTGAGTaGGAATCTGGCCGTTTCGCC +
Preference number: 4 (lower is better)
Translates to: AACQHVLFSKQGAFHLCEENDLE*ESGRFA
Trigger: GGCGAAACGGCCAGATTCTCACTCAAGGTCGTTCTC...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAATTCCTGGAGAGCATGTaGTACCCAGGCCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQFLESM*YPGPGM
Trigger: CATCCCTGGGCCTGGGTATCACATGCTCTCCAGGAA...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCCAGTTTCTCCACATCCTCACCAACGCCTGTGAGTGTTCATCTTTTTATTCTGGCCTGGTGTCCCAGGTaGGTTAGTAGGAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: SSFSTSSPTPVSVHLFILAWCPR*VSRSPP
Trigger: TGGTGGGCTCCTACTAACGCACCTGGGACACCAGGC...CAGAATAAAAAGATGAACACTCACAGGCGTTGGTGAGGATGTGGAGAAACTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR GCA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGCTCGAACAGCACCACTaGAAAAGACTGCACCAGGCG +
Preference number: 4 (lower is better)
Translates to: AACQHVLFSKQGAFHLCELEQHH*KRLHQA
Trigger: CGCCTGGTGCAGTCTTTTGCAGTGGTGCTGTTCGAG...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGGTGAATGTGCCCAGCTaGCCGAAGGTGATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: AACQHVLFSKQGAFHLCEVNVPS*PKVMFS
Trigger: CGAGAACATCACCTTCGGGCAGCTGGGCACATTCAC...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTGATTCGGTGGAGACATaGCCGTTGGGGCCCAATGAT +
Preference number: 4 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSADSVET*PLGPND
Trigger: ATCATTGGGCCCCAACGGGCATGTCTCCACCGAATC...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTGAGGTGTGTATTATCTaGAGTTGGCATCAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCEVCII*SWHQSE
Trigger: CTCGCTCTGATGCCAACTGCAGATAATACACACCTC...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AAACTTTCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAAATCCCGTGGCCACGTaGATCCCCAGGCACAGCTAC +
Preference number: 4 (lower is better)
Translates to: KLSYKNPVHTGVSPVGTANPVAT*IPRHSY
Trigger: GTAGCTGTGCCTGGGGATGCACGTGGCCACGGGATT...TGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGAAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGAAAAGCAGAGGGCGTGTaGATGGGAGACGCCACTGAT +
Preference number: 4 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGKAEGV*MGDATD
Trigger: ATCAGTGGCGTCTCCCATGCACACGCCCTCTGCTTT...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AGGTTTTGTGAGGACATGTTTTTCTCTTGGGCGACTCCTAGGAGTGGAGCTGCTCAGCGTGGAGCAGCATaGCATTGCTTTTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: RFCEDMFFSWATPRSGAAQRGAA*HCFSWL
Trigger: CAGCCATGAAAAGCAATGGCATGCTGCTCCACGCTG...AGCAGCTCCACTCCTAGGAGTCGCCCAAGAGAAAAACATGTCCTCACAAAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp CCGGGCAATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCTGTCCGCAGACTCAGTaGTCTCACTCTCTGATGCAC +
Preference number: 4 (lower is better)
Translates to: PGNLSSAVSLGICSSGHFCPQTQ*SHSLMH
Trigger: GTGCATCAGAGAGTGAGACCACTGAGTCTGCGGACA...GAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTGCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp ACAAGGTTTTGTGAGGACATGTTTTTCTCTTGGGCGACTCCTAGGAGTGGAGCTGTAGACTCGGTGCTCTaGTTGGAGGAGAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: TRFCEDMFFSWATPRSGAVDSVL*LEEKDS
Trigger: CGAGTCCTTCTCCTCCAACCAGAGCACCGAGTCTAC...AGCTCCACTCCTAGGAGTCGCCCAAGAGAAAAACATGTCCTCACAAAACCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGTCAGAGTGTGCCAGATaGGCTGTTGCTTCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: AACQHVLFSKQGAFHLCESECAR*AVASGA
Trigger: CGCACCTGAAGCAACAGCCCATCTGGCACACTCTGA...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGCAGCAGGAGTGGCTCTaGGTGCTGCTGGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: TRLQKCNREDTGVTARHLQQEWL*VLLASC
Trigger: GCATGAAGCCAGCAGCACCCAGAGCCACTCCTGCTG...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AAACTTTCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCACACACGTCCCTCTGGTaGGAGCCAGGTCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KLSYKNPVHTGVSPVGTAHTSLW*EPGLAP
Trigger: TGGAGCAAGACCTGGCTCCCACCAGAGGGACGTGTG...TGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGAAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCACACACACGTCCCTCTaGTGGGAGCCAGGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSTHTSL*WEPGLA
Trigger: AGCAAGACCTGGCTCCCACCAGAGGGACGTGTGTGT...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAATGGAGACATGCCCGTTaGGGCCCAATGATGGGGGAA +
Preference number: 4 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQWRHAR*GPMMGE
Trigger: TTCCCCCATCATTGGGCCCCAACGGGCATGTCTCCA...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTTTTCCTCCCCTGAAATaGCTATTTCAAGAGTCTATG +
Preference number: 4 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGFPPLK*LFQESM
Trigger: CATAGACTCTTGAAATAGCCATTTCAGGGGAGGAAA...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGATTTGAGCAGTGTGGCTaGGTCTGCTTGCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGFEQCG*VCLLCT
Trigger: GGTGCAGAGCAAGCAGACCCAGCCACACTGCTCAAA...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTACAGAGCTCAGAAACTaGACTCTCCCTCTAGCCATT +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCTELRN*TLPLAI
Trigger: AATGGCTAGAGGGAGAGTCCAGTTTCTGAGCTCTGT...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATGCTCCACACTGTTCTTaGAAACACTACTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYAPHCS*KHYWAP
Trigger: GGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGAGC...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAACTTCCGGGCCAGTGTTaGCCGCAGGAGAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQLPGQC*PQENSL
Trigger: AAGACTGTTCTCCTGCGGCCAACACTGGCCCGGAAG...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGTCTTGCAGGGAGATCTaGAGTCCACCCCTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: AACQHVLFSKQGAFHLCESCREI*SPPLRA
Trigger: AGCCCTAAGGGGTGGACTCCAGATCTCCCTGCAAGA...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGATCACAGCAGCTCACCTaGCCCTACGGCATAGTTCAG +
Preference number: 4 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGSQQLT*PYGIVQ
Trigger: CTGAACTATGCCGTAGGGCCAGGTGAGCTGCTGTGA...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566428.5
3UTR CAA 72 bp TGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTaGGGGGCTACCAACAAGGTAATGTCTGGATGTGAG +
Preference number: 4 (lower is better)
Translates to: CNREDTGVTARH*GATNKVMSGCE
Trigger: CTCACATCCAGACATTACCTTGTTGGTAGCCCCCAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 72 bp ACTGCCAGACTGTTTCTCAGCGGCTGCTCATTTACATaGCTCCTAGCCATACAGGAGAGCTCCAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: TARLFLSGCSFT*LLAIQESSSFS
Trigger: GGAGAAACTGGAGCTCTCCTGTATGGCTAGGAGCAATGTAAATGAGCAGCCGCTGAGAAACAGTCTGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR TCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTTTACGACATCAGAATTaGGTTCTCTGGCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCLRHQN*VLWPVV
Trigger: AACCACAGGCCAGAGAACTCAATTCTGATGTCGTAA...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAAGAGAACGACCTTGAGTaGGAATCTGGCCGTTTCGCC +
Preference number: 4 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQENDLE*ESGRFA
Trigger: GGCGAAACGGCCAGATTCTCACTCAAGGTCGTTCTC...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGACATCGGTCACAGGATTaGTTCCGTCCCTTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGHRSQD*FRPFPG
Trigger: TCCAGGAAAGGGACGGAATCAATCCTGTGACCGATG...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGCATCGGTCACAGGATTaGTTCCGTCCCTTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: AACQHVLFSKQGAFHLCEHRSQD*FRPFPG
Trigger: TCCAGGAAAGGGACGGAATCAATCCTGTGACCGATG...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGGAGCCATCGCCGTCCTaGAGCACAGGGGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LNPMRVAWINLNIRILIWEPSPS*STGGGA
Trigger: GGCACCACCCCCTGTGCTGCAGGACGGCGATGGCTC...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp ATAATAAACGACGTTGCTACAGACATTTGTGTACAAGGTTTTGTGAGGACATGTTGGTCCCAGGACGGGTaGGAGGGCGACTCGCCCATG +
Preference number: 4 (lower is better)
Translates to: IINDVATDICVQGFVRTCWSQDG*EGDSPM
Trigger: CATGGGCGAGTCGCCCTCGCACCCGTCCTGGGACCA...ACATGTCCTCACAAAACCTTGTACACAAATGTCTGTAGCAACGTCGTTTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR GCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGGGTAGGAGTCGATGCTaGCCGCGGGCTTCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LNPMRVAWINLNIRILIWGRSRC*PRASPG
Trigger: CCCGGGAGAAGCCCGCGGGCAGCATCGACTCCTACC...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAAGGCCAGCCAGCTGTTTaGGGATTTCAGGTAGGAGTC +
Preference number: 4 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQGQPAV*GFQVGV
Trigger: GACTCCTACCTGAAATCCGCAAACAGCTGGCTGGCC...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCCCATGGAGGCTTCTCTaGTTCAGAAGGGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSPWRLL*FRRELS
Trigger: GGACAGCTCCCTTCTGAAGCAGAGAAGCCTCCATGG...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATCTTTCCTGTGCTTCTTaGGAGGGACACACAGCACAA +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYLSCAS*EGHTAQ
Trigger: TTGTGCTGTGTGTCCCTCGCAAGAAGCACAGGAAAG...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AAACTTTCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCACCTGAGTTTCACCGGTaGAAGGAGGAGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KLSYKNPVHTGVSPVGTAPEFHR*KEESSA
Trigger: GGCACTGCTCTCCTCCTTGCACCGGTGAAACTCAGG...TGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGAAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGGAGTTCAGGCTGCAGTaGACTCAGGCTCTGACTGTT +
Preference number: 4 (lower is better)
Translates to: AACQHVLFSKQGAFHLCEEFRLQ*TQALTV
Trigger: AACAGTCAGAGCCTGAGTGCACTGCAGCCTGAACTC...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TCACAGAGTAACTCTTGTGTTTCACCTTTAAAGGAACTGCCAGACTGTTTCTCACCTCTGGGGTCTCCATaGCTCAGGGGAGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SQSNSCVSPLKELPDCFSPLGSP*LRGAAG
Trigger: ACCAGCAGCTCCCCTGAGCCATGGAGACCCCAGAGG...TGAGAAACAGTCTGGCAGTTCCTTTAAAGGTGAAACACAAGAGTTACTCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAAACTCGGTGCTCTGGTTaGAGGAGAAGGACTCGTTGG +
Preference number: 4 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAETRCSG*RRRTRW
Trigger: CCAACGAGTCCTTCTCCTCCAACCAGAGCACCGAGT...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTAGTACTCTCCAAACTTaGCTTTCTCCTCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: VPESADKVGSWVLPKSYCSTLQT*LSPPDP
Trigger: TGGATCAGGAGGAGAAAGCCAAGTTTGGAGAGTACT...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTGCCCACGATGGCCCATaGAGTCCTTCCCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVAHDGP*SPSPPP
Trigger: GGGAGGAGGGGAAGGACTCCATGGGCCATCGTGGGC...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTAGTCTCTGCAGAGGCTaGAGGAGCTACAAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSASLCRG*RSYKGL
Trigger: CAGACCTTTGTAGCTCCTCCAGCCTCTGCAGAGACT...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAATCGTGCTCCTGGTTTTaGGCATTCTGCCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQSCSWF*AFCLLG
Trigger: TCCCAGCAGGCAGAATGCCCAAAACCAGGAGCACGA...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAAACTCCTCAGCATTACTaGGCTGGGAGGAGTGAGCGA +
Preference number: 4 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAETPQHY*AGRSER
Trigger: TCGCTCACTCCTCCCAGCCCAGTAATGCTGAGGAGT...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTATGGCTCAGTGGGACTaGAAACGGGACAGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSAMAQWD*KRDRKR
Trigger: CCTTTTCCTGTCCCGTTTCCAGTCCCACTGAGCCAT...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGGACTCCCCTTTCCTGTaGACGCAGCTGGGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: AACQHVLFSKQGAFHLCEDSPFL*TQLGKS
Trigger: ACTTTTTCCCAGCTGCGTCCACAGGAAAGGGGAGTC...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGACACATTCCTGTTCCTaGCCCGCGGCAGCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: TRLQKCNREDTGVTARHLTHSCS*PAAARV
Trigger: AACCCTTGCTGCCGCGGGCCAGGAACAGGAATGTGT...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTCTTGCAGGGAGATCTaGAGTCCACCCCTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSSCREI*SPPLRA
Trigger: AGCCCTAAGGGGTGGACTCCAGATCTCCCTGCAAGA...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAACAGAGGGCGTGTGCATaGGAGACGCCACTGATAGTT +
Preference number: 4 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQQRACA*ETPLIV
Trigger: AACTATCAGTGGCGTCTCCCATGCACACGCCCTCTG...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAGGAGAGCTCCAGTTTCTCCACATCCTCACCAACGCCTGTGAGTGTTCATCTTTTGGGCTTCTGTGTCTaGCTTCTTCCACTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: QESSSFSTSSPTPVSVHLLGFCV*LLPLSF
Trigger: GAAACTCAGTGGAAGAAGCCAGACACAGAAGCCCAA...AAGATGAACACTCACAGGCGTTGGTGAGGATGTGGAGAAACTGGAGCTCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR CAA 72 bp CCAGCCACTGTCACTCCCAACTCAGACTTTCCTGCCTaGTCTGGAATAAAGAGCAGCACTGTTTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: PATVTPNSDFPA*SGIKSSTVCFQ
Trigger: CTGAAAGCAAACAGTGCTGCTCTTTATTCCAGACAAGGCAGGAAAGTCTGAGTTGGGAGTGACAGTGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TCACAGAGTAACTCTTGTGTTTCACCTTTAAAGGAACTGCCAGACTGTTTCTCACCCCGAAGAAGCCCTTaGCATTCTCAGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: SQSNSCVSPLKELPDCFSPRRSP*HSQSWP
Trigger: CGGCCAGGACTGAGAATGTCAAGGGCTTCTTCGGGG...TGAGAAACAGTCTGGCAGTTCCTTTAAAGGTGAAACACAAGAGTTACTCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR TCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCTTCTTTCCTCACAACTaGACTCCTCAGCATTACTGG +
Preference number: 4 (lower is better)
Translates to: APDTHSVIQPICSTDCCLFFPHN*TPQHYW
Trigger: CCAGTAATGCTGAGGAGTTCAGTTGTGAGGAAAGAA...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATGCAGGAGAACAGTCTTaGTGTGCTTCTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYAGEQS*CASSIW
Trigger: CCAAATGGAAGAAGCACATCAAGACTGTTCTCCTGC...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCTCTTGGGCGACTCCTAGGAGTGGAGCTGCTGGGTCACAGAGTAACTCTTGTGCTTTTCCATTTTCACTaGTGCAGTACTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: SLGRLLGVELLGHRVTLVLFHFH*CSTLQT
Trigger: AGTTTGGAGAGTACTGCAGCAGTGAAAATGGAAAAG...CACAAGAGTTACTCTGTGACCCAGCAGCTCCACTCCTAGGAGTCGCCCAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR GCA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTCAGGTAGGAGTCGATaGTGCCCGCGGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVSGRSR*CPRASP
Trigger: GGGAGAAGCCCGCGGGCAGCATCGACTCCTACCTGA...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TCCAGTTTCTCCACATCCTCACCAACGCCTGTGAGTGTTCATCTTTTTATTCTGGGCCAGCCAGCTGTTTaGGGATTTCAGGTAGGAGTC +
Preference number: 4 (lower is better)
Translates to: SSFSTSSPTPVSVHLFILGQPAV*GFQVGV
Trigger: GACTCCTACCTGAAATCCGCAAACAGCTGGCTGGCC...CAGAATAAAAAGATGAACACTCACAGGCGTTGGTGAGGATGTGGAGAAACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR GCA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAACAGAACCTCAGAGTGTaGCAGATGGGCTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAEQNLRV*QMGCCF
Trigger: GAAGCAACAGCCCATCTGGCACACTCTGAGGTTCTG...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGACTGGGTGTGCCGGCTaGAGCCCCACCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: LNPMRVAWINLNIRILIWTGCAG*SPTSWL
Trigger: CAGCCATGAGGTGGGGCTGCAGCCGGCACACCCAGT...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGAGAACAAAGTCTGAATaGATTTCAGCTAACACGAAT +
Preference number: 4 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRRTKSE*ISANTN
Trigger: ATTCGTGTTAGCTGAAATGCATTCAGACTTTGTTCT...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGGGTCGGGCGGCAGAGTaGCTGCAATGGCCCCATGGA +
Preference number: 4 (lower is better)
Translates to: LNPMRVAWINLNIRILIWGRAAE*LQWPHG
Trigger: TCCATGGGGCCATTGCAGGCACTCTGCCGCCCGACC...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCCATGCACAGGGCAGATaGAATCTATTACCACGGCCC +
Preference number: 4 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSHAQGR*NLLPRP
Trigger: GGGCCGTGGTAATAGATTGCATCTGCCCTGTGCATG...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCCCCAGTTCTAGTCAATaGACAGGGGATTTACTGACA +
Preference number: 4 (lower is better)
Translates to: APDTHSVIQPICSTDCCLPSSSQ*TGDLLT
Trigger: TGTCAGTAAATCCCCTGTGCATTGACTAGAACTGGG...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AAACTTTCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAAGATACTGGTGTCACTaGACGCCACTTGGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: KLSYKNPVHTGVSPVGTARYWCH*TPLGGY
Trigger: GTAGCCCCCAAGTGGCGTGCAGTGACACCAGTATCT...TGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGAAAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CTTCTTCCACTGAGTTTCACGATGTTTCCCAGGTCTATCCCTGCTACAGCGTGGCTGTTTCTCAGCGGCTaGTCATTTACATTGCTCCTA +
Preference number: 4 (lower is better)
Translates to: LLPLSFTMFPRSIPATAWLFLSG*SFTLLL
Trigger: TAGGAGCAATGTAAATGAGCAGCCGCTGAGAAACAG...CCACGCTGTAGCAGGGATAGACCTGGGAAACATCGTGAAACTCAGTGGAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR GCA 90 bp CCGGGCAATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCGGAGCAGCATGCCATTaGTTTTCATGGCTGGCTAAT +
Preference number: 4 (lower is better)
Translates to: PGNLSSAVSLGICSSGHFGAACH*FSWLAN
Trigger: ATTAGCCAGCCATGAAAAGCAATGGCATGCTGCTCC...GAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTGCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp CAATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCATAGGAGGGTCTCTTCATCCTaGGTAGACTCGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QSVICCVSRNLQFWTFHRRVSSS*VDSVLW
Trigger: CCAGAGCACCGAGTCTACCCAGGATGAAGAGACCCT...CCTATGAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGTCTGCCTGCTGGGACTaGGAACCTCTCCCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: TRLQKCNREDTGVTARHLSACWD*EPLPRK
Trigger: TTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGA...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AAACTTTCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCATCGTGCTCCTGGTTTTaGGCATTCTGCCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KLSYKNPVHTGVSPVGTASCSWF*AFCLLG
Trigger: TCCCAGCAGGCAGAATGCCCAAAACCAGGAGCACGA...TGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGAAAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCCCAATGCGTGTTGCTTaGATTAACCTGAACATCAGG +
Preference number: 4 (lower is better)
Translates to: APDTHSVIQPICSTDCCLPMRVA*INLNIR
Trigger: CCTGATGTTCAGGTTAATCCAAGCAACACGCATTGG...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGAGCGAGAGGCCTGTTTaGTTTCAACTCACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AACQHVLFSKQGAFHLCESERPV*FQLTGR
Trigger: CCTTCCTGTGAGTTGAAACCAAACAGGCCTCTCGCT...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp ACAAGGTTTTGTGAGGACATGTTTTTCTCTTGGGCGACTCCTAGGAGTGGAGCTAGAATTCTGCCATTCTaGTGGGGACAAAGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: TRFCEDMFFSWATPRSGARILPF*WGQRQL
Trigger: TAGCTGCCTTTGTCCCCATCAGAATGGCAGAATTCT...AGCTCCACTCCTAGGAGTCGCCCAAGAGAAAAACATGTCCTCACAAAACCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR TCA 90 bp ACAAGGTTTTGTGAGGACATGTTTTTCTCTTGGGCGACTCCTAGGAGTGGAGCTTCTGGCTTCTTCCACTaGGTTTCACGATGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: TRFCEDMFFSWATPRSGASGFFH*VSRCFP
Trigger: TGGGAAACATCGTGAAACTCAGTGGAAGAAGCCAGA...AGCTCCACTCCTAGGAGTCGCCCAAGAGAAAAACATGTCCTCACAAAACCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp ATTTTTAGTGTATTCACAGAGTTGTGCAGCCACCACCATTTCCAGAACATTCTCCTGGGCCGCTTCTCCTaGGGTTTGTTCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: IFSVFTELCSHHHFQNILLGRFS*GLFSSS
Trigger: GGAAGACGAGAACAAACCCCAGGAGAAGCGGCCCAG...GAGAATGTTCTGGAAATGGTGGTGGCTGCACAACTCTGTGAATACACTAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp AAACTTTCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCACTGGGGCCTACTCAGTaGCCATTTGCTCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: KLSYKNPVHTGVSPVGTALGPTQ*PFAQCG
Trigger: ACCACATTGAGCAAATGGCCACTGAGTAGGCCCCAG...TGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGAAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGAGTCTCTGCAGAGGCTaGAGGAGCTACAAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TRLQKCNREDTGVTARHLSLCRG*RSYKGL
Trigger: CAGACCTTTGTAGCTCCTCCAGCCTCTGCAGAGACT...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGACAGAGCTCAGAAACTaGACTCTCCCTCTAGCCATT +
Preference number: 4 (lower is better)
Translates to: AACQHVLFSKQGAFHLCETELRN*TLPLAI
Trigger: AATGGCTAGAGGGAGAGTCCAGTTTCTGAGCTCTGT...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTGGTTCAAGATCAAGCTaGGGCTGGGGGCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVGSRSS*GWGQWL
Trigger: GAGCCACTGCCCCCAGCCCCAGCTTGATCTTGAACC...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000566428.5
CDS-3UTR TCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAAGCAGGAGAACAGTCTTaGTGTGCTTCTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQAGEQS*CASSIW
Trigger: CCAAATGGAAGAAGCACATCAAGACTGTTCTCCTGC...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TTTTGTGAGGACATGTTTTTCTCTTGGGCGACTCCTAGGAGTGGAGCTGCTGGGGTGTACAAGGTTTTGTaGGGACATGTTTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: FCEDMFFSWATPRSGAAGVYKVL*GHVFLL
Trigger: CAAGAGAAAAACATGTCCTCACAAAACCTTGTACAC...CCCAGCAGCTCCACTCCTAGGAGTCGCCCAAGAGAAAAACATGTCCTCACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR GCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTTTGCCAATCACAGCCTaGTTCTTCAGGAAGTCATTG +
Preference number: 4 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSALPITA*FFRKSL
Trigger: CAATGACTTCCTGAAGAAGCAGGCTGTGATTGGCAA...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTGCCACTGGCTTGCCCTaGACGTTGCACAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVATGLP*TLHRSA
Trigger: AGCAGATCTGTGCAACGTGCAGGGCAAGCCAGTGGC...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGCCGGCTCCCCCGTTCTaGAGTCTGGCAGCATATGGT +
Preference number: 4 (lower is better)
Translates to: LNPMRVAWINLNIRILIWPAPPF*SLAAYG
Trigger: ACCATATGCTGCCAGACTGCAGAACGGGGGAGCCGG...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTACAAACCCAATCCCTTaGCAGCACCAGAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVTNPIP*QHQRQG
Trigger: GCCCTGCCTCTGGTGCTGGCAAGGGATTGGGTTTGT...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp ACAAGGTTTTGTGAGGACATGTTTTTCTCTTGGGCGACTCCTAGGAGTGGAGCTAGTACTCTCCAAACTTaGCTTTCTCCTCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: TRFCEDMFFSWATPRSGASTLQT*LSPPDP
Trigger: TGGATCAGGAGGAGAAAGCCAAGTTTGGAGAGTACT...AGCTCCACTCCTAGGAGTCGCCCAAGAGAAAAACATGTCCTCACAAAACCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp ATTTTTAGTGTATTCACAGAGTTGTGCAGCCACCACCATTTCCAGAACATTCTCTTGGAGTTGCAGCGCTaGGCACTCACGTATCGAGCA +
Preference number: 4 (lower is better)
Translates to: IFSVFTELCSHHHFQNILLELQR*ALTYRA
Trigger: TGCTCGATACGTGAGTGCCCAGCGCTGCAACTCCAA...GAGAATGTTCTGGAAATGGTGGTGGCTGCACAACTCTGTGAATACACTAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGACTTTCCTGCCTTGTCTaGAATAAAGAGCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGLSCLV*NKEQHC
Trigger: ACAGTGCTGCTCTTTATTCCAGACAAGGCAGGAAAG...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTACACAACCCTCGCTCTaGCATTTCTCTAAATGGATT +
Preference number: 4 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSATQPSL*HFSKWI
Trigger: AATCCATTTAGAGAAATGTCAGAGCGAGGGTTGTGT...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp ATAATAAACGACGTTGCTACAGACATTTGTGTACAAGGTTTTGTGAGGACATGTGGGAGAAGAGGTGGGTaGCTCAGGCCCAAAGTCGAT +
Preference number: 4 (lower is better)
Translates to: IINDVATDICVQGFVRTCGRRGG*LRPKVD
Trigger: ATCGACTTTGGGCCTGAGGCACCCACCTCTTCTCCC...ACATGTCCTCACAAAACCTTGTACACAAATGTCTGTAGCAACGTCGTTTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR GCA 90 bp ACAAGGTTTTGTGAGGACATGTTTTTCTCTTGGGCGACTCCTAGGAGTGGAGCTTTCCATTTTCACTGCTaGAGTACTCTCCAAACTTGG +
Preference number: 4 (lower is better)
Translates to: TRFCEDMFFSWATPRSGAFHFHC*STLQTW
Trigger: CCAAGTTTGGAGAGTACTGCAGCAGTGAAAATGGAA...AGCTCCACTCCTAGGAGTCGCCCAAGAGAAAAACATGTCCTCACAAAACCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR GCA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGCAACTCAGACTTTCCTaGCTTGTCTGGAATAAAGAG +
Preference number: 4 (lower is better)
Translates to: AACQHVLFSKQGAFHLCEQLRLS*LVWNKE
Trigger: CTCTTTATTCCAGACAAGGCAGGAAAGTCTGAGTTG...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTAAAGCAGAGGGCGTGTaGATGGGAGACGCCACTGAT +
Preference number: 4 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVKAEGV*MGDATD
Trigger: ATCAGTGGCGTCTCCCATGCACACGCCCTCTGCTTT...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CCGGGCAATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCTTCATCTTTTTATTCTaGCACTCTGGTGAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: PGNLSSAVSLGICSSGHFFIFLF*HSGECE
Trigger: CTCACACTCACCAGAGTGGCAGAATAAAAAGATGAA...GAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTGCCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTGCCATTTGCTCAATGTaGTCACTAAGCAGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSAAICSM*SLSSLY
Trigger: ATACAAGCTGCTTAGTGACCACATTGAGCAAATGGC...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGTTCTCCAAGCAACCCTaGCCAGAGCCACTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LNPMRVAWINLNIRILIWFSKQP*PEPLSA
Trigger: GGCTGACAGTGGCTCTGGCCAGGGTTGCTTGGAGAA...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTGAGAGGAAACCTTGGTaGCAGGTGGTAAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVERKPW*QVVSPV
Trigger: GACAGGGCTTACCACCTGCCACCAAGGTTTCCTCTC...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTAGGCCTTCGTGCTCCTaGTTTTGGGCATTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVRPSCS*FWAFCL
Trigger: CAGGCAGAATGCCCAAAACCAGGAGCACGAAGGCCT...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CCGGGCAATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCAGGAATCTGCAGTTCTaGACATTTCATAGGGATGAT +
Preference number: 4 (lower is better)
Translates to: PGNLSSAVSLGICSSGHFRNLQF*TFHRDD
Trigger: ATCATCCCTATGAAATGTCCAGAACTGCAGATTCCT...GAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTGCCCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
3UTR CAA 72 bp ACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTaGTCTCTAGAGAATGTTCCGTCTCTGGAACATTCC +
Preference number: 4 (lower is better)
Translates to: TFCDPTNLQHRL*SLENVPSLEHS
Trigger: GGAATGTTCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 72 bp AGAGCTCAGAAACTGGACTCTCCCTCTAGCCATTTTTaGGAAATTTCAGAGCTGTTTGGCCCCCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: RAQKLDSPSSHF*EISELFGPLSF
Trigger: GAAAGAAAGGGGGCCAAACAGCTCTGAAATTTCCAAAAAATGGCTAGAGGGAGAGTCCAGTTTCTGAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
3UTR CAA 72 bp GTTGGAGTAAACAAACCCAGCCCATCGTCTCTCCCCTaGGATATGGTGAATTTTTCCCTTTCCAACAGTAAC +
Preference number: 4 (lower is better)
Translates to: VGVNKPSPSSLP*DMVNFSLSNSN
Trigger: GTTACTGTTGGAAAGGGAAAAATTCACCATATCCAAGGGGAGAGACGATGGGCTGGGTTTGTTTACTCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGTTACGACATCAGAATTaGGTTCTCTGGCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: TRLQKCNREDTGVTARHLLRHQN*VLWPVV
Trigger: AACCACAGGCCAGAGAACTCAATTCTGATGTCGTAA...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp AATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCATAGGGCCTCACCAACGCCTGTaGGTGTTCATCTTTTTATTC +
Preference number: 4 (lower is better)
Translates to: NLSSAVSLGICSSGHFIGPHQRL*VFIFLF
Trigger: GAATAAAAAGATGAACACTCACAGGCGTTGGTGAGG...CCCTATGAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR TCA 90 bp ATAATAAACGACGTTGCTACAGACATTTGTGTACAAGGTTTTGTGAGGACATGTATCACTGGACAGCCATaGAGGTGGTTTCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: IINDVATDICVQGFVRTCITGQP*RWFPPR
Trigger: CCGAGGTGGAAACCACCTTCATGGCTGTCCAGTGAT...ACATGTCCTCACAAAACCTTGTACACAAATGTCTGTAGCAACGTCGTTTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR GCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTCTTTTCCATTTTCACTaGTGCAGTACTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSALFHFH*CSTLQT
Trigger: AGTTTGGAGAGTACTGCAGCAGTGAAAATGGAAAAG...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp ATAATAAACGACGTTGCTACAGACATTTGTGTACAAGGTTTTGTGAGGACATGTAGACACACTTGGAGTTaGAGCGCTGGGCACTCACGT +
Preference number: 4 (lower is better)
Translates to: IINDVATDICVQGFVRTCRHTWS*SAGHSR
Trigger: ACGTGAGTGCCCAGCGCTGCAACTCCAAGTGTGTCT...ACATGTCCTCACAAAACCTTGTACACAAATGTCTGTAGCAACGTCGTTTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR GCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTAAAAACATACCATGCTaGCTGTCAACATGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSAKNIPC*LSTCPV
Trigger: AACAGGACATGTTGACAGGCAGCATGGTATGTTTTT...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTCTTGGAAACACTACTaGGCTCCCTGGCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVSWKHY*APWLCC
Trigger: ACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGA...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTGACTCCCCTTTCCTGTaGACGCAGCTGGGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVDSPFL*TQLGKS
Trigger: ACTTTTTCCCAGCTGCGTCCACAGGAAAGGGGAGTC...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGAAGACGGGACTTATCTaGCCGCATGTCAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LNPMRVAWINLNIRILIWKTGLI*PHVRGG
Trigger: ACCTCCTCTGACATGCGGTCAGATAAGTCCCGTCTT...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR TCA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAATCAGTTTCTACCTTCTaGCAACTCAAGGTGCAATAT +
Preference number: 4 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQSVSTF*QLKVQY
Trigger: ATATTGCACCTTGAGTTGTCAGAAGGTAGAAACTGA...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCCTTTTCCATTTTCACTaGTGCAGTACTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSLFHFH*CSTLQT
Trigger: AGTTTGGAGAGTACTGCAGCAGTGAAAATGGAAAAG...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGGAAGAGAGGAAACCTTaGTGGCAGGTGGTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LNPMRVAWINLNIRILIWEERKP*WQVVSP
Trigger: AGGGCTTACCACCTGCCACCAAGGTTTCCTCTCTTC...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGGACTCCCCTTTCCTGTaGACGCAGCTGGGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: LNPMRVAWINLNIRILIWDSPFL*TQLGKS
Trigger: ACTTTTTCCCAGCTGCGTCCACAGGAAAGGGGAGTC...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp CAATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCATAGGATTGCTTTTCATGGCTaGCTAATAGTCCATGCAACG +
Preference number: 4 (lower is better)
Translates to: QSVICCVSRNLQFWTFHRIAFHG*LIVHAT
Trigger: CGTTGCATGGACTATTAGCCAGCCATGAAAAGCAAT...CCTATGAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CCA 90 bp GTGTTCATCTTTTTATTCTGCCACTCTGGTGAGTGTGAGAATTCTGCCATTCTGTGCCATTGCTTTTCATaGCTGGCTAATAGTCCATGC +
Preference number: 4 (lower is better)
Translates to: VFIFLFCHSGECENSAILCHCFS*LANSPC
Trigger: GCATGGACTATTAGCCAGCCATGAAAAGCAATGGCA...CAGAATGGCAGAATTCTCACACTCACCAGAGTGGCAGAATAAAAAGATGAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR TCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGGTAGAAGGTTGCCTCTaGGACACACTTGGAGTTGCA +
Preference number: 4 (lower is better)
Translates to: LNPMRVAWINLNIRILIWVEGCL*DTLGVA
Trigger: TGCAACTCCAAGTGTGTCTCAGAGGCAACCTTCTAC...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTAGAACAAAGTCTGAATaGATTTCAGCTAACACGAAT +
Preference number: 4 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSARTKSE*ISANTN
Trigger: ATTCGTGTTAGCTGAAATGCATTCAGACTTTGTTCT...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGAGAACAGTCTTGATGTaGTTCTTCCATTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: TRLQKCNREDTGVTARHLRTVLM*FFHLVS
Trigger: AGACACCAAATGGAAGAAGCACATCAAGACTGTTCT...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGAGCGAGAGGCCTGTTTaGTTTCAACTCACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LNPMRVAWINLNIRILIWSERPV*FQLTGR
Trigger: CCTTCCTGTGAGTTGAAACCAAACAGGCCTCTCGCT...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGTTCCATTTTCACTGCTaGAGTACTCTCCAAACTTGG +
Preference number: 4 (lower is better)
Translates to: LNPMRVAWINLNIRILIWFHFHC*STLQTW
Trigger: CCAAGTTTGGAGAGTACTGCAGCAGTGAAAATGGAA...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR GCA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGAGAACAAAGTCTGAATaGATTTCAGCTAACACGAAT +
Preference number: 4 (lower is better)
Translates to: LNPMRVAWINLNIRILIWRTKSE*ISANTN
Trigger: ATTCGTGTTAGCTGAAATGCATTCAGACTTTGTTCT...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS GCA 90 bp ACCGGGCAGCGAACCGGCGCCGTCAGACTCGGCTGCTGCGGCGACTaGGCCGCCCGCGAGCAGCCGGGTCCTTTCCCGGCGCCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: TGQRTGAVRLGCCGD*AAREQPGPFPAPRR
Trigger: GCGCCGCGGCGCCGGGAAAGGACCCGGCTGCTCGCGGGCGGCGCAGTCGCCGCAGCAGCCGAGTCTGACGGCGCCGGTTCGCTGCCCGGT
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258180.7
ENST00000538274.5
CDS GCA 90 bp CGCGGGCGGACCGGGCAGCGAACCGGCGCCGTCAGACTCGGCTGCTaGGGCGACTGCGCCGCCCGCGAGCAGCCGGGTCCTTTCCCGGCG +
Preference number: 5 (lower is better)
Translates to: RGRTGQRTGAVRLGC*GDCAAREQPGPFPA
Trigger: CGCCGGGAAAGGACCCGGCTGCTCGCGGGCGGCGCAGTCGCCGCAGCAGCCGAGTCTGACGGCGCCGGTTCGCTGCCCGGTCCGCCCGCG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258180.7
ENST00000538274.5
CDS GCA 90 bp CACCGCGGGCGGACCGGGCAGCGAACCGGCGCCGTCAGACTCGGCTaGTGCGGCGACTGCGCCGCCCGCGAGCAGCCGGGTCCTTTCCCG +
Preference number: 5 (lower is better)
Translates to: HRGRTGQRTGAVRLG*CGDCAAREQPGPFP
Trigger: CGGGAAAGGACCCGGCTGCTCGCGGGCGGCGCAGTCGCCGCAGCAGCCGAGTCTGACGGCGCCGGTTCGCTGCCCGGTCCGCCCGCGGTG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538274.5
CDS GCA 90 bp CATCGCGGGCGGACCGGGCAGCGAACCGGCGCCGTCAGACTCGGCTaGTGCGGCGACTGCGCCGCCCGCGAGCAGCCGGGTCCTTTCCCG +
Preference number: 5 (lower is better)
Translates to: HRGRTGQRTGAVRLG*CGDCAAREQPGPFP
Trigger: CGGGAAAGGACCCGGCTGCTCGCGGGCGGCGCAGTCGCCGCAGCAGCCGAGTCTGACGGCGCCGGTTCGCTGCCCGGTCCGCCCGCGATG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258180.7
CDS CCA 90 bp CAGGTCATCGGGTGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATaGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: QVIGWGDGRALGPGE*HMASVLLRSATSGA
Trigger: GGCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCACCCGATGACCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562388.1
ENST00000566428.5
ENST00000683363.1
CDS CCA 90 bp TCGGGTGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATaGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCCTACTCAG +
Preference number: 5 (lower is better)
Translates to: SGGVTAGRWARENGT*PQSSCGVRPLGPTQ
Trigger: CTGAGTAGGCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCACCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562388.1
ENST00000566428.5
ENST00000683363.1
CDS-3UTR CAA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGCCGCGTGTGCACCCATaGCAGGGAAGGTGGCCCACG +
Preference number: 5 (lower is better)
Translates to: RALGPGEWHMASVLLRSAPRVHP*QGRWPT
Trigger: CGTGGGCCACCTTCCCTGCAATGGGTGCACACGCGG...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCGGCCACGCCACTGGCTaGCCCTGCACGTTGCACAGA +
Preference number: 5 (lower is better)
Translates to: GVTAGRWARENGTWPQSSGHATG*PCTLHR
Trigger: TCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCC...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCGCGTGTGCACCCATaGCAGGGAAGGTGGCCCACG +
Preference number: 5 (lower is better)
Translates to: GRWARENGTWPQSSCGVRPRVHP*QGRWPT
Trigger: CGTGGGCCACCTTCCCTGCAATGGGTGCACACGCGG...TCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCGGCCACGCCACTGGCTaGCCCTGCACGTTGCACAGA +
Preference number: 5 (lower is better)
Translates to: WGDGRALGPGEWHMASVLGHATG*PCTLHR
Trigger: TCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCC...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTCCCAGCATGCAGGTGTaGGGGTCAGGCCCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: LGPGEWHMASVLLRSATSPSMQV*GSGPGP
Trigger: GGGCCCGGGGCCTGACCCCAACACCTGCATGCTGGG...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS CCA 90 bp CAAGAGCGTCACCCGCTGGCCTCCCAGGGGAAAGGGCCGGGGAGCTaGGCCCTTGTCTCTGGGACGCCCACCATGGCCTGCCTGGAATTG +
Preference number: 5 (lower is better)
Translates to: QERHPLASQGKGPGS*ALVSGTPTMACLEL
Trigger: CAATTCCAGGCAGGCCATGGTGGGCGTCCCAGAGACAAGGGCCCAGCTCCCCGGCCCTTTCCCCTGGGAGGCCAGCGGGTGACGCTCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS-3UTR CAA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCGAGACACACTTGGAGTaGCAGCGCTGGGCACTCACG +
Preference number: 5 (lower is better)
Translates to: GVTAGRWARENGTWPQSSETHLE*QRWALT
Trigger: CGTGAGTGCCCAGCGCTGCAACTCCAAGTGTGTCTC...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCCCCACGCAGGGACCTTaGAGCAGTGTGGCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: VTAGRWARENGTWPQSSCPTQGP*SSVAGS
Trigger: AGACCCAGCCACACTGCTCAAAGGTCCCTGCGTGGG...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGCCTCTGAGACACACTaGGAGTTGCAGCGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: TAGRWARENGTWPQSSCGASETH*ELQRWA
Trigger: TGCCCAGCGCTGCAACTCCAAGTGTGTCTCAGAGGC...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCCCAGGCGGTAGAAGGTaGCCTCTGAGACACACTTGG +
Preference number: 5 (lower is better)
Translates to: GVTAGRWARENGTWPQSSPGGRR*PLRHTW
Trigger: CCAAGTGTGTCTCAGAGGCAACCTTCTACCGCCTGG...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCCCAAAGGCCAGCATGTaGTGCGTGAATGTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: GVTAGRWARENGTWPQSSPKASM*CVNVPS
Trigger: GCTGGGCACATTCACGCACAACATGCTGGCCTTTGG...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTCCGCGTGTGCACCCATaGCAGGGAAGGTGGCCCACG +
Preference number: 5 (lower is better)
Translates to: LGPGEWHMASVLLRSATSPRVHP*QGRWPT
Trigger: CGTGGGCCACCTTCCCTGCAATGGGTGCACACGCGG...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGTGGGAGCCAGGTCTaGCTCCAGCCGGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: LGPGEWHMASVLLRSATSGGSQV*LQPAKS
Trigger: GCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACC...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCGGCTTGCCCTGCACGTaGCACAGATCTGCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: GVTAGRWARENGTWPQSSGLPCT*HRSASL
Trigger: GAGAGAAGCAGATCTGTGCAACGTGCAGGGCAAGCC...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCGTGGAGACATGCCCGTaGGGGCCCAATGATGGGGGA +
Preference number: 5 (lower is better)
Translates to: ALGPGEWHMASVLLRSATVETCP*GPNDGG
Trigger: TCCCCCATCATTGGGCCCCAACGGGCATGTCTCCAC...GGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCTCTGGCCGTTTCGCCTaGTGGCTGCGGAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: VTAGRWARENGTWPQSSCSGRFA*WLRKLR
Trigger: CCTCAGTTTCCGCAGCCACAAGGCGAAACGGCCAGA...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS GCA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTaGGGAGTGCGACCTCTGGGGCCTACTCAGTGGCCATTTGCTCAA +
Preference number: 5 (lower is better)
Translates to: AGRWARENGTWPQSS*GVRPLGPTQWPFAQ
Trigger: TTGAGCAAATGGCCACTGAGTAGGCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562388.1
ENST00000562580.5
ENST00000566428.5
ENST00000683363.1
CDS-3UTR CAA 90 bp GCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCGAGACACACTTGGAGTaGCAGCGCTGGGCACTCACG +
Preference number: 5 (lower is better)
Translates to: ALGPGEWHMASVLLRSATETHLE*QRWALT
Trigger: CGTGAGTGCCCAGCGCTGCAACTCCAAGTGTGTCTC...GGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCCGCTTCTCCTGGGGTTaGTTCTCGTCTTCCTCGTTC +
Preference number: 5 (lower is better)
Translates to: GVTAGRWARENGTWPQSSRFSWG*FSSSSF
Trigger: GAACGAGGAAGACGAGAACAAACCCCAGGAGAAGCG...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCAAGGTGATGTTCTCGTaGAACCGGAGGCTGTCGTCG +
Preference number: 5 (lower is better)
Translates to: GVTAGRWARENGTWPQSSKVMFS*NRRLSS
Trigger: CGACGACAGCCTCCGGTTCAACGAGAACATCACCTT...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGGTGGAGACATGCCCGTaGGGGCCCAATGATGGGGGA +
Preference number: 5 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGVETCP*GPNDGG
Trigger: TCCCCCATCATTGGGCCCCAACGGGCATGTCTCCAC...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCTTCGTGCTCCTGGTTTaGGGCATTCTGCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: WGDGRALGPGEWHMASVLFVLLV*GILPAG
Trigger: CCCAGCAGGCAGAATGCCCAAAACCAGGAGCACGAA...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCTTCCGGGCCAGTGTaGGCCGCAGGAGAACAGTCT +
Preference number: 5 (lower is better)
Translates to: GPGEWHMASVLLRSATSGASGPV*AAGEQS
Trigger: AGACTGTTCTCCTGCGGCCAACACTGGCCCGGAAGC...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGCCATCGGTCACAGGATaGATTCCGTCCCTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: RPGAGPGRMAHGLSPPAEPSVTG*IPSLSW
Trigger: CCAGGAAAGGGACGGAATCAATCCTGTGACCGATGG...CTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCCACCAAGCTCACAAGTaGCCAGTAACTGCCGGCTAC +
Preference number: 5 (lower is better)
Translates to: PGAGPGRMAHGLSPPAECHQAHK*PVTAGY
Trigger: GTAGCCGGCAGTTACTGGCAACTTGTGAGCTTGGTG...GCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTCACCAAGCTCACAAGTaGCCAGTAACTGCCGGCTAC +
Preference number: 5 (lower is better)
Translates to: GRALGPGEWHMASVLLRSHQAHK*PVTAGY
Trigger: GTAGCCGGCAGTTACTGGCAACTTGTGAGCTTGGTG...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATGGAGGAACGGCGGTCTaGGTCCCAGGACGGGTGCGA +
Preference number: 5 (lower is better)
Translates to: QRLEAEATPLACPARCTDGGTAV*VPGRVR
Trigger: TCGCACCCGTCCTGGGACCAAGACCGCCGTTCCTCC...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCGAGGAGAAGGACTCGTaGGAGGAGGAACGGCGGTCT +
Preference number: 5 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGEEKDS*EEERRS
Trigger: AGACCGCCGTTCCTCCTCCAACGAGTCCTTCTCCTC...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCGAGGAGAAGGACTCGTaGGAGGAGGAACGGCGGTCT +
Preference number: 5 (lower is better)
Translates to: AGPGRMAHGLSPPAECDLEEKDS*EEERRS
Trigger: AGACCGCCGTTCCTCCTCCAACGAGTCCTTCTCCTC...GAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCCTCTGAGACACACTaGGAGTTGCAGCGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: GPGEWHMASVLLRSATSGASETH*ELQRWA
Trigger: TGCCCAGCGCTGCAACTCCAAGTGTGTCTCAGAGGC...CCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCGCCTCTGAGACACACTaGGAGTTGCAGCGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: AGPGRMAHGLSPPAECDLASETH*ELQRWA
Trigger: TGCCCAGCGCTGCAACTCCAAGTGTGTCTCAGAGGC...GAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCCAGGCGGTAGAAGGTaGCCTCTGAGACACACTTGG +
Preference number: 5 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDPGGRR*PLRHTW
Trigger: CCAAGTGTGTCTCAGAGGCAACCTTCTACCGCCTGG...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCGGCCAGCCAGCTGTTaGCGGATTTCAGGTAGGAGT +
Preference number: 5 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDRPASC*RISGRS
Trigger: ACTCCTACCTGAAATCCGCAAACAGCTGGCTGGCCG...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCCCCCGAAGAAGCCCTaGACATTCTCAGTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGPPKKP*TFSVLA
Trigger: GGCCAGGACTGAGAATGTCAAGGGCTTCTTCGGGGG...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCCGCTTCTCCTGGGGTTaGTTCTCGTCTTCCTCGTTC +
Preference number: 5 (lower is better)
Translates to: VTAGRWARENGTWPQSSCRFSWG*FSSSSF
Trigger: GAACGAGGAAGACGAGAACAAACCCCAGGAGAAGCG...GCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCGTGCCAGATGGGCTGTaGCTTCAGGTGCGTGTACAG +
Preference number: 5 (lower is better)
Translates to: ALGPGEWHMASVLLRSATVPDGL*LQVRVQ
Trigger: CTGTACACGCACCTGAAGCAACAGCCCATCTGGCAC...GGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGAGTGCCAGATGGGCTGTaGCTTCAGGTGCGTGTACAG +
Preference number: 5 (lower is better)
Translates to: GRWARENGTWPQSSCGVRVPDGL*LQVRVQ
Trigger: CTGTACACGCACCTGAAGCAACAGCCCATCTGGCAC...TCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGTCTTTCCTGTGCTTCTaGCGAGGGACACACAGCACA +
Preference number: 5 (lower is better)
Translates to: DGRALGPGEWHMASVLLRSFLCF*RGTHST
Trigger: TGTGCTGTGTGTCCCTCGCAAGAAGCACAGGAAAGA...CCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTCTTTCCTGTGCTTCTaGCGAGGGACACACAGCACA +
Preference number: 5 (lower is better)
Translates to: GVTAGRWARENGTWPQSSSFLCF*RGTHST
Trigger: TGTGCTGTGTGTCCCTCGCAAGAAGCACAGGAAAGA...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCGGCTTGCCCTGCACGTaGCACAGATCTGCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: ALGPGEWHMASVLLRSATGLPCT*HRSASL
Trigger: GAGAGAAGCAGATCTGTGCAACGTGCAGGGCAAGCC...GGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTCCCAGCATGCAGGTGTaGGGGTCAGGCCCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGPSMQV*GSGPGP
Trigger: GGGCCCGGGGCCTGACCCCAACACCTGCATGCTGGG...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGAGGAAGAGAGGAAACCTaGGTGGCAGGTGGTAAGCCC +
Preference number: 5 (lower is better)
Translates to: GRWARENGTWPQSSCGVRGREET*VAGGKP
Trigger: GGGCTTACCACCTGCCACCAAGGTTTCCTCTCTTCC...TCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGCTCCACACTGTTCTaGGAAACACTACTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: DGRALGPGEWHMASVLLRSSTLF*ETLLGS
Trigger: GGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGAGCT...CCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCGCTTCCGGGCCAGTGTaGGCCGCAGGAGAACAGTCT +
Preference number: 5 (lower is better)
Translates to: EWLWVLLASCRSSGGVTAASGPV*AAGEQS
Trigger: AGACTGTTCTCCTGCGGCCAACACTGGCCCGGAAGC...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCCCATCGGTCACAGGATaGATTCCGTCCCTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: PGAGPGRMAHGLSPPAECPSVTG*IPSLSW
Trigger: CCAGGAAAGGGACGGAATCAATCCTGTGACCGATGG...GCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS GCA 90 bp TTTCGGCCAGCCAGCTGTTTGCGGATTTCAGGTAGGAGTCGATGCTaGCCGCGGGCTTCTCCCGGGACTCCGGGGGCAGCAGCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: FRPASCLRISGRSRC*PRASPGTPGAAAVV
Trigger: AACCACAGCTGCTGCCCCCGGAGTCCCGGGAGAAGCCCGCGGGCAGCATCGACTCCTACCTGAAATCCGCAAACAGCTGGCTGGCCGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS GCA 90 bp TCTTTTCGGCCAGCCAGCTGTTTGCGGATTTCAGGTAGGAGTCGATaGTGCCCGCGGGCTTCTCCCGGGACTCCGGGGGCAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: SFRPASCLRISGRSR*CPRASPGTPGAAAV
Trigger: CACAGCTGCTGCCCCCGGAGTCCCGGGAGAAGCCCGCGGGCAGCATCGACTCCTACCTGAAATCCGCAAACAGCTGGCTGGCCGAAAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS-3UTR CAA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGATGGTCATGAGGTTCTaGGCAGGCCCAAAGTCATCC +
Preference number: 5 (lower is better)
Translates to: AGRWARENGTWPQSSCGVMVMRF*AGPKSS
Trigger: GGATGACTTTGGGCCTGCCAAGAACCTCATGACCAT...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCCGGCCAGCCAGCTGTTaGCGGATTTCAGGTAGGAGT +
Preference number: 5 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGRPASC*RISGRS
Trigger: ACTCCTACCTGAAATCCGCAAACAGCTGGCTGGCCG...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACAAGGTGATGTTCTCGTaGAACCGGAGGCTGTCGTCG +
Preference number: 5 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDKVMFS*NRRLSS
Trigger: CGACGACAGCCTCCGGTTCAACGAGAACATCACCTT...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGGAGCGAGAGGCCTGTTaGGTTTCAACTCACAGGAAG +
Preference number: 5 (lower is better)
Translates to: GDGRALGPGEWHMASVLLEREAC*VSTHRK
Trigger: CTTCCTGTGAGTTGAAACCAAACAGGCCTCTCGCTC...CAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAAGCTCCACACTGTTCTaGGAAACACTACTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: TAGRWARENGTWPQSSCGSSTLF*ETLLGS
Trigger: GGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGAGCT...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGGAGTGAGAACGACCTaGAGTGAGAATCTGGCCGTT +
Preference number: 5 (lower is better)
Translates to: PGAGPGRMAHGLSPPAECGVRTT*SENLAV
Trigger: AACGGCCAGATTCTCACTCAAGGTCGTTCTCACTCC...GCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGAAAGCCAAGCTGTCTCTaGCAGGGAGATCTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: GRWARENGTWPQSSCGVRKPSCL*QGDLES
Trigger: GGACTCCAGATCTCCCTGCAAGAGACAGCTTGGCTT...TCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS GCA 90 bp CAGCAGCCGCTCGGCGATGTCCTTCTTTTCGGCCAGCCAGCTGTTTaGGGATTTCAGGTAGGAGTCGATGCTGCCCGCGGGCTTCTCCCG +
Preference number: 5 (lower is better)
Translates to: QQPLGDVLLFGQPAV*GFQVGVDAARGLLP
Trigger: CGGGAGAAGCCCGCGGGCAGCATCGACTCCTACCTGAAATCCGCAAACAGCTGGCTGGCCGAAAAGAAGGACATCGCCGAGCGGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS GCA 90 bp GCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTaGGACCTCTGGGGCCTACTCAGTGGCCATTTGCTCAATGTGGTC +
Preference number: 5 (lower is better)
Translates to: AGPGRMAHGLSPPAE*DLWGLLSGHLLNVV
Trigger: GACCACATTGAGCAAATGGCCACTGAGTAGGCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562388.1
ENST00000562580.5
ENST00000566428.5
ENST00000683363.1
CDS-3UTR CAA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCGACTCGGTGCTCTGGTaGGAGGAGAAGGACTCGTTG +
Preference number: 5 (lower is better)
Translates to: EWLWVLLASCRSSGGVTADSVLW*EEKDSL
Trigger: CAACGAGTCCTTCTCCTCCAACCAGAGCACCGAGTC...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACATGGTCATGAGGTTCTaGGCAGGCCCAAAGTCATCC +
Preference number: 5 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDMVMRF*AGPKSS
Trigger: GGATGACTTTGGGCCTGCCAAGAACCTCATGACCAT...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCCCCCCGAAGAAGCCCTaGACATTCTCAGTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASPPKKP*TFSVLA
Trigger: GGCCAGGACTGAGAATGTCAAGGGCTTCTTCGGGGG...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCCCAAAGGCCAGCATGTaGTGCGTGAATGTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: EWLWVLLASCRSSGGVTAPKASM*CVNVPS
Trigger: GCTGGGCACATTCACGCACAACATGCTGGCCTTTGG...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGTCATTGCACAGCTTCTaGTTCAGTCCAAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: AGRWARENGTWPQSSCGVSLHSF*FSPKAS
Trigger: GCTGGCCTTTGGACTGAACAAGAAGCTGTGCAATGA...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGTCATTGCACAGCTTCTaGTTCAGTCCAAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GDGRALGPGEWHMASVLLSLHSF*FSPKAS
Trigger: GCTGGCCTTTGGACTGAACAAGAAGCTGTGCAATGA...CAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCCTTACGACATCAGAATaGAGTTCTCTGGCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: GVTAGRWARENGTWPQSSLTTSE*SSLACG
Trigger: ACCACAGGCCAGAGAACTCAATTCTGATGTCGTAAG...GGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCCGGCGGCACCCATCCTaGCGAGCCCATCGGTCACAG +
Preference number: 5 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFRRHPS*RAHRSQ
Trigger: CTGTGACCGATGGGCTCGCAAGGATGGGTGCCGCCG...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGAAGCCAAGCTGTCTCTaGCAGGGAGATCTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWKPSCL*QGDLES
Trigger: GGACTCCAGATCTCCCTGCAAGAGACAGCTTGGCTT...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GAGTGGCTCTGGGTGCTGCTGGCTTCATGCAGGTCATCGGGTGGGGTGACGGCCGTCACTGCACGCCACTaGGGGGCTACCAACAAGGTA +
Preference number: 5 (lower is better)
Translates to: EWLWVLLASCRSSGGVTAVTARH*GATNKV
Trigger: TACCTTGTTGGTAGCCCCCAAGTGGCGTGCAGTGAC...GGCCGTCACCCCACCCGATGACCTGCATGAAGCCAGCAGCACCCAGAGCCACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS TCA 90 bp GCCCATGTCATTCTCACTGTCCGCAGACTCAGTGGTCTCACTCTCTaGTGCACCGTCCCCCAGGGAGCCATCGCCGTCCTGCAGCACAGG +
Preference number: 5 (lower is better)
Translates to: AHVILTVRRLSGLTL*CTVPQGAIAVLQHR
Trigger: CCTGTGCTGCAGGACGGCGATGGCTCCCTGGGGGACGGTGCATCAGAGAGTGAGACCACTGAGTCTGCGGACAGTGAGAATGACATGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS GCA 90 bp AAGGACTCGTTGGAGGAGGAACGGCGGTCTTGGTCCCAGGACGGGTaGGAGGGCGACTCGCCCATGTCATTCTCACTGTCCGCAGACTCA +
Preference number: 5 (lower is better)
Translates to: KDSLEEERRSWSQDG*EGDSPMSFSLSADS
Trigger: TGAGTCTGCGGACAGTGAGAATGACATGGGCGAGTCGCCCTCGCACCCGTCCTGGGACCAAGACCGCCGTTCCTCCTCCAACGAGTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS CCA 90 bp GGAAAGGGCCGGGGAGCTGGGCCCTTGTCTCTGGGACGCCCACCATaGCCTGCCTGGAATTGTCAGCAGAAACTAAAACGCACTGCTGCC +
Preference number: 5 (lower is better)
Translates to: GKGRGAGPLSLGRPP*PAWNCQQKLKRTAA
Trigger: GGCAGCAGTGCGTTTTAGTTTCTGCTGACAATTCCAGGCAGGCCATGGTGGGCGTCCCAGAGACAAGGGCCCAGCTCCCCGGCCCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS-3UTR CAA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCCGGCCAGCCAGCTGTTaGCGGATTTCAGGTAGGAGT +
Preference number: 5 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTRPASC*RISGRS
Trigger: ACTCCTACCTGAAATCCGCAAACAGCTGGCTGGCCG...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCACTAAGCAGCTTGTATaGCTCTTCATCCAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: WGDGRALGPGEWHMASVLTKQLV*LFIQVA
Trigger: GGCAACCTGGATGAAGAGCAATACAAGCTGCTTAGT...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCTGGTCACTAAGCAGCTaGTATTGCTCTTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: WGDGRALGPGEWHMASVLWSLSS*YCSSSR
Trigger: CCTGGATGAAGAGCAATACAAGCTGCTTAGTGACCA...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACTGCAGCACAGACTGTaGTCTCTAGAGAATGTTCCG +
Preference number: 5 (lower is better)
Translates to: GRWARENGTWPQSSCGVRLQHRL*SLENVP
Trigger: CGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAG...TCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTTTTGGTTCACTAGGATaGGCACAGCCCTCAAGGTCG +
Preference number: 5 (lower is better)
Translates to: RWARENGTWPQSSCGVRPFGSLG*AQPSRS
Trigger: CGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA...AGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGGAAAGAAGACGAGACTaGGTGATGTCTGTGATTCCC +
Preference number: 5 (lower is better)
Translates to: AGRWARENGTWPQSSCGVERRRD*VMSVIP
Trigger: GGGAATCACAGACATCACCAAGTCTCGTCTTCTTTC...CACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGGAAAGAAGACGAGACTaGGTGATGTCTGTGATTCCC +
Preference number: 5 (lower is better)
Translates to: GDGRALGPGEWHMASVLLERRRD*VMSVIP
Trigger: GGGAATCACAGACATCACCAAGTCTCGTCTTCTTTC...CAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGGGAGTGAGAACGACCTaGAGTGAGAATCTGGCCGTT +
Preference number: 5 (lower is better)
Translates to: ARENGTWPQSSCGVRPLGGVRTT*SENLAV
Trigger: AACGGCCAGATTCTCACTCAAGGTCGTTCTCACTCC...CCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGACGCAGGAGAACAGTCTaGATGTGCTTCTTCCATTTG +
Preference number: 5 (lower is better)
Translates to: TAGRWARENGTWPQSSCGRRRTV*MCFFHL
Trigger: CAAATGGAAGAAGCACATCAAGACTGTTCTCCTGCG...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS TCA 90 bp GCCCACCAAGCTCACAAGTTGCCAGTAACTGCCGGCTACCAAGAATaGGTCCTTCACAGCAGCTCACCTGGCCCTACGGCATCGCGGGCG +
Preference number: 5 (lower is better)
Translates to: AHQAHKLPVTAGYQE*VLHSSSPGPTASRA
Trigger: CGCCCGCGATGCCGTAGGGCCAGGTGAGCTGCTGTGAAGGACTCATTCTTGGTAGCCGGCAGTTACTGGCAACTTGTGAGCTTGGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258180.7
CDS-3UTR CAA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCTCATTGCACAGCTTCTaGTTCAGTCCAAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGSLHSF*FSPKAS
Trigger: GCTGGCCTTTGGACTGAACAAGAAGCTGTGCAATGA...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTACTCAGTGGCCATTaGCTCAATGTGGTCACTAAG +
Preference number: 5 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDLLSGH*LNVVTK
Trigger: CTTAGTGACCACATTGAGCAAATGGCCACTGAGTAG...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCTTCCCCTCCTCCCTCTaGGTCTCATCTCACAAGCCT +
Preference number: 5 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTFPSSL*VSSHKP
Trigger: AGGCTTGTGAGATGAGACCAAGAGGGAGGAGGGGAA...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTGGTGGGAGCCAGGTCTaGCTCCAGCCGGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: STLFLETLLGSLAVLWSGGGSQV*LQPAKS
Trigger: GCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACC...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCACCCACGCAGGGACCTTaGAGCAGTGTGGCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPAPTQGP*SSVAGS
Trigger: AGACCCAGCCACACTGCTCAAAGGTCCCTGCGTGGG...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCCATCGTCTCTCCCCTaGGATATGGTGAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: GAGPGRMAHGLSPPAECDPSSLP*DMVNFS
Trigger: GGAAAAATTCACCATATCCAAGGGGAGAGACGATGG...GTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGGAGCGGGACACAAGATaGCAAAAATGCAACAGAGAA +
Preference number: 5 (lower is better)
Translates to: RALGPGEWHMASVLLRSAERDTR*QKCNRE
Trigger: TTCTCTGTTGCATTTTTGCAATCTTGTGTCCCGCTC...CGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS GCA 90 bp GGGCCGGGGAGCTGGGCCCTTGTCTCTGGGACGCCCACCATGGCCTaGCTGGAATTGTCAGCAGAAACTAAAACGCACTGCTGCCTAATT +
Preference number: 5 (lower is better)
Translates to: GPGSWALVSGTPTMA*LELSAETKTHCCLI
Trigger: AATTAGGCAGCAGTGCGTTTTAGTTTCTGCTGACAATTCCAGGCAGGCCATGGTGGGCGTCCCAGAGACAAGGGCCCAGCTCCCCGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS GCA 90 bp ACTGTCTCCGGAAGCCGTTCAAGCAGTAGCAGGGCCATGTCTCTCTaGCCACACACAGGAGGTTCAAGATCAAGCTGGGGCTGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: TVSGSRSSSSRAMSL*PHTGGSRSSWGWGQ
Trigger: CTGCCCCCAGCCCCAGCTTGATCTTGAACCTCCTGTGTGTGGGCAGAGAGACATGGCCCTGCTACTGCTTGAACGGCTTCCGGAGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566428.5
CDS CCA 90 bp TCCCTGAGTGCCAGGGTCTCTTCATCCTGGGTAGACTCGGTGCTCTaGTTGGAGGAGAAGGACTCGTTGGAGGAGGAACGGCGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: SLSARVSSSWVDSVL*LEEKDSLEEERRSW
Trigger: CCAAGACCGCCGTTCCTCCTCCAACGAGTCCTTCTCCTCCAACCAGAGCACCGAGTCTACCCAGGATGAAGAGACCCTGGCACTCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS CCA 90 bp GTCAGTAAGAGGGTGACGGGAAGCCGCGGGCTCGGCCTTACCAGATaGGCTGTTGCTTCAGGTGCGTGTACAGGTAGATCTTCTCCCCCT +
Preference number: 5 (lower is better)
Translates to: VSKRVTGSRGLGLTR*AVASGACTGRSSPP
Trigger: AGGGGGAGAAGATCTACCTGTACACGCACCTGAAGCAACAGCCCATCTGGTAAGGCCGAGCCCGCGGCTTCCCGTCACCCTCTTACTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CAA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGGAGGAGAAGGACTCGTaGGAGGAGGAACGGCGGTCT +
Preference number: 5 (lower is better)
Translates to: QCPRTVKQKALDPACRCWEEKDS*EEERRS
Trigger: AGACCGCCGTTCCTCCTCCAACGAGTCCTTCTCCTC...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGCCCCCGAAGAAGCCCTaGACATTCTCAGTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRPPKKP*TFSVLA
Trigger: GGCCAGGACTGAGAATGTCAAGGGCTTCTTCGGGGG...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCTTCTTCAGGAAGTCATaGCACAGCTTCTTGTTCAGT +
Preference number: 5 (lower is better)
Translates to: PGAGPGRMAHGLSPPAECFFRKS*HSFLFS
Trigger: ACTGAACAAGAAGCTGTGCAATGACTTCCTGAAGAA...GCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TGGGGTGACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCTTCTTCAGGAAGTCATaGCACAGCTTCTTGTTCAGT +
Preference number: 5 (lower is better)
Translates to: WGDGRALGPGEWHMASVLFFRKS*HSFLFS
Trigger: ACTGAACAAGAAGCTGTGCAATGACTTCCTGAAGAA...GAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGTCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCACTAAGCAGCTTGTATaGCTCTTCATCCAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGTKQLV*LFIQVA
Trigger: GGCAACCTGGATGAAGAGCAATACAAGCTGCTTAGT...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCGTGTATTATCTGCAGTaGGCATCAGAGCGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASVYYLQ*ASERGV
Trigger: CACCCCTCGCTCTGATGCCAACTGCAGATAATACAC...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTCAGGGAGCTTTTCACTaGTGTGAGTTGTTTGCATTT +
Preference number: 5 (lower is better)
Translates to: GRALGPGEWHMASVLLRSQGAFH*CELFAF
Trigger: AAATGCAAACAACTCACACAAGTGAAAAGCTCCCTG...ACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCCTTACGACATCAGAATaGAGTTCTCTGGCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGLTTSE*SSLACG
Trigger: ACCACAGGCCAGAGAACTCAATTCTGATGTCGTAAG...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCTCTGGCCGTTTCGCCTaGTGGCTGCGGAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLSGRFA*WLRKLR
Trigger: CCTCAGTTTCCGCAGCCACAAGGCGAAACGGCCAGA...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGCACAAACCCAATCCCTaGCCAGCACCAGAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRHKPNP*PAPEAG
Trigger: CCCTGCCTCTGGTGCTGGCAAGGGATTGGGTTTGTG...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGCACAAACCCAATCCCTaGCCAGCACCAGAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: QCPRTVKQKALDPACRCWHKPNP*PAPEAG
Trigger: CCCTGCCTCTGGTGCTGGCAAGGGATTGGGTTTGTG...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCCTAGTGTTCCAACGTTaGCCTTCTCTTTCTCCACGT +
Preference number: 5 (lower is better)
Translates to: AGPGRMAHGLSPPAECDLLVFQR*PSLSPR
Trigger: ACGTGGAGAAAGAGAAGGCAAACGTTGGAACACTAG...GAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp ACGGCCGGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGGGGATCCATGTGTGTaGTCTGAATTTCTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: TAGRWARENGTWPQSSCGGDPCV*SEFLAF
Trigger: AAAAGCTAGAAATTCAGACAACACACATGGATCCCC...TCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCCGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS CCA 90 bp GGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTaGGGCCTACTCAGTGGCCATTTGCTCAATGTGGTCACTAAGCAG +
Preference number: 5 (lower is better)
Translates to: GRMAHGLSPPAECDL*GLLSGHLLNVVTKQ
Trigger: CTGCTTAGTGACCACATTGAGCAAATGGCCACTGAGTAGGCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562388.1
ENST00000562580.5
ENST00000566428.5
ENST00000683363.1
CDS CCA 90 bp AAGGTGATGTTCTCGTTGAACCGGAGGCTGTCGTCGCGCTCCTCCTaGGTCATGTGGCACCACTTCTCCCAGATGGGCTGTTGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: KVMFSLNRRLSSRSS*VMWHHFSQMGCCFR
Trigger: CCTGAAGCAACAGCCCATCTGGGAGAAGTGGTGCCACATGACCCAGGAGGAGCGCGACGACAGCCTCCGGTTCAACGAGAACATCACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562564.1
CDS-3UTR CAA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCACCAGGCGGTAGAAGGTaGCCTCTGAGACACACTTGG +
Preference number: 5 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPAPGGRR*PLRHTW
Trigger: CCAAGTGTGTCTCAGAGGCAACCTTCTACCGCCTGG...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCGTGCCAGATGGGCTGTaGCTTCAGGTGCGTGTACAG +
Preference number: 5 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFVPDGL*LQVRVQ
Trigger: CTGTACACGCACCTGAAGCAACAGCCCATCTGGCAC...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCAGTGCCAGATGGGCTGTaGCTTCAGGTGCGTGTACAG +
Preference number: 5 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPAVPDGL*LQVRVQ
Trigger: CTGTACACGCACCTGAAGCAACAGCCCATCTGGCAC...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGATTCTTCAGGAAGTCATaGCACAGCTTCTTGTTCAGT +
Preference number: 5 (lower is better)
Translates to: GRWARENGTWPQSSCGVRFFRKS*HSFLFS
Trigger: ACTGAACAAGAAGCTGTGCAATGACTTCCTGAAGAA...TCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGACTAAGCAGCTTGTATaGCTCTTCATCCAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: WARENGTWPQSSCGVRPLTKQLV*LFIQVA
Trigger: GGCAACCTGGATGAAGAGCAATACAAGCTGCTTAGT...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTCTACTCAGTGGCCATTaGCTCAATGTGGTCACTAAG +
Preference number: 5 (lower is better)
Translates to: LGPGEWHMASVLLRSATSLLSGH*LNVVTK
Trigger: CTTAGTGACCACATTGAGCAAATGGCCACTGAGTAG...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCGGTGGGAGCCAGGTCTaGCTCCAGCCGGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: APDTHSVIQPICSTDCCLGGSQV*LQPAKS
Trigger: GCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACC...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCCTGCAGCACAGACTGTaGTCTCTAGAGAATGTTCCG +
Preference number: 5 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASLQHRL*SLENVP
Trigger: CGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAG...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CAGCGCTTAGAGGCAGAGGCCACGCCACTGGCTTGCCCTGCACGTTGCACAGATTTTGGTTCACTAGGATaGGCACAGCCCTCAAGGTCG +
Preference number: 5 (lower is better)
Translates to: QRLEAEATPLACPARCTDFGSLG*AQPSRS
Trigger: CGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA...ATCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCCTCTGCCTCTAAGCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGCGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACAGGGAGCTTTTCACTaGTGTGAGTTGTTTGCATTT +
Preference number: 5 (lower is better)
Translates to: GRWARENGTWPQSSCGVRQGAFH*CELFAF
Trigger: AAATGCAAACAACTCACACAAGTGAAAAGCTCCCTG...TCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGCGCAGGAGAACAGTCTaGATGTGCTTCTTCCATTTG +
Preference number: 5 (lower is better)
Translates to: WARENGTWPQSSCGVRPLRRRTV*MCFFHL
Trigger: CAAATGGAAGAAGCACATCAAGACTGTTCTCCTGCG...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCCGGCGGCACCCATCCTaGCGAGCCCATCGGTCACAG +
Preference number: 5 (lower is better)
Translates to: APDTHSVIQPICSTDCCLRRHPS*RAHRSQ
Trigger: CTGTGACCGATGGGCTCGCAAGGATGGGTGCCGCCG...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGCCATCGTCTCTCCCCTaGGATATGGTGAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: WARENGTWPQSSCGVRPLPSSLP*DMVNFS
Trigger: GGAAAAATTCACCATATCCAAGGGGAGAGACGATGG...CAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTCCATCGTCTCTCCCCTaGGATATGGTGAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: LGPGEWHMASVLLRSATSPSSLP*DMVNFS
Trigger: GGAAAAATTCACCATATCCAAGGGGAGAGACGATGG...AGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CGCTGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTGAGCGGGACACAAGATaGCAAAAATGCAACAGAGAA +
Preference number: 5 (lower is better)
Translates to: RWARENGTWPQSSCGVRPERDTR*QKCNRE
Trigger: TTCTCTGTTGCATTTTTGCAATCTTGTGTCCCGCTC...AGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS TCA 90 bp GCCCACCAAGCTCACAAGTTGCCAGTAACTGCCGGCTACCAAGAATaGGTCCTTCACAGCAGCTCACCTGGCCCTACGGCATCTCTCACC +
Preference number: 5 (lower is better)
Translates to: AHQAHKLPVTAGYQE*VLHSSSPGPTASLT
Trigger: GGTGAGAGATGCCGTAGGGCCAGGTGAGCTGCTGTGAAGGACTCATTCTTGGTAGCCGGCAGTTACTGGCAACTTGTGAGCTTGGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538274.5
ENST00000683363.1
CDS-3UTR CAA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTCGCTTCTCCTGGGGTTaGTTCTCGTCTTCCTCGTTC +
Preference number: 5 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGRFSWG*FSSSSF
Trigger: GAACGAGGAAGACGAGAACAAACCCCAGGAGAAGCG...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGAAGGTGATGTTCTCGTaGAACCGGAGGCTGTCGTCG +
Preference number: 5 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRKVMFS*NRRLSS
Trigger: CGACGACAGCCTCCGGTTCAACGAGAACATCACCTT...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCTGGTCACTAAGCAGCTaGTATTGCTCTTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTWSLSS*YCSSSR
Trigger: CCTGGATGAAGAGCAATACAAGCTGCTTAGTGACCA...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCTTCCCCTCCTCCCTCTaGGTCTCATCTCACAAGCCT +
Preference number: 5 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLFPSSL*VSSHKP
Trigger: AGGCTTGTGAGATGAGACCAAGAGGGAGGAGGGGAA...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TGGTGGGAGCCAGGTCTTGCTCCAGCCGGCCAAGAGCATCCTCTACACCGCACCATGTGCTTCTTCCATTaGGTGTCTCAGGCACCAACA +
Preference number: 5 (lower is better)
Translates to: WWEPGLAPAGQEHPLHRTMCFFH*VSQAPT
Trigger: TGTTGGTGCCTGAGACACCAAATGGAAGAAGCACAT...GGTGCGGTGTAGAGGATGCTCTTGGCCGGCTGGAGCAAGACCTGGCTCCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATCGGCGGCACCCATCCTaGCGAGCCCATCGGTCACAG +
Preference number: 5 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYRRHPS*RAHRSQ
Trigger: CTGTGACCGATGGGCTCGCAAGGATGGGTGCCGCCG...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp AAGGGGCTGTCTCTCCGGCATCCTGTGTGGATGGAGCACAGAGGAGACCTTCTCAAGCCAAGCTGTCTCTaGCAGGGAGATCTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: KGLSLRHPVWMEHRGDLLKPSCL*QGDLES
Trigger: GGACTCCAGATCTCCCTGCAAGAGACAGCTTGGCTT...GAGAAGGTCTCCTCTGTGCTCCATCCACACAGGATGCCGGAGAGACAGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGGGATCCATGTGTGTaGTCTGAATTTCTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: GPGRMAHGLSPPAECDLWGDPCV*SEFLAF
Trigger: AAAAGCTAGAAATTCAGACAACACACATGGATCCCC...CCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS GCA 90 bp AGGTGCGTTAGTAGGAGCCCACCAAGCTCACAAGTTGCCAGTAACTaGCGGCTACCAAGAATGAGTCCTTCACAGCAGCTCACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RCVSRSPPSSQVASN*RLPRMSPSQQLTWP
Trigger: GGGCCAGGTGAGCTGCTGTGAAGGACTCATTCTTGGTAGCCGGCAGTTACTGGCAACTTGTGAGCTTGGTGGGCTCCTACTAACGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS-3UTR CAA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACGGAAGAGAGGAAACCTaGGTGGCAGGTGGTAAGCCC +
Preference number: 5 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDGREET*VAGGKP
Trigger: GGGCTTACCACCTGCCACCAAGGTTTCCTCTCTTCC...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTTTCGTGCTCCTGGTTTaGGGCATTCTGCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: STLFLETLLGSLAVLWSGFVLLV*GILPAG
Trigger: CCCAGCAGGCAGAATGCCCAAAACCAGGAGCACGAA...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTTTTGGTTCACTAGGATaGGCACAGCCCTCAAGGTCG +
Preference number: 5 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGFGSLG*AQPSRS
Trigger: CGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTGGAGTGAGAACGACCTaGAGTGAGAATCTGGCCGTT +
Preference number: 5 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGGVRTT*SENLAV
Trigger: AACGGCCAGATTCTCACTCAAGGTCGTTCTCACTCC...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS TCA 90 bp CATTGCACAGCTTCTTGTTCAGTCCAAAGGCCAGCATGTTGTGCGTaGATGTGCTGCAGGAGAAACCCCAAGAGCGTCACCCGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: HCTASCSVQRPACCA*MCCRRNPKSVTRWP
Trigger: AGGCCAGCGGGTGACGCTCTTGGGGTTTCTCCTGCAGCACATTCACGCACAACATGCTGGCCTTTGGACTGAACAAGAAGCTGTGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS TCA 90 bp GCCCACCAAGCTCACAAGTTGCCAGTAACTGCCGGCTACCAAGAATaGGTCCTTCACAGCAGCTCACCTGGCCCTACGGCATCTAGAATG +
Preference number: 5 (lower is better)
Translates to: AHQAHKLPVTAGYQE*VLHSSSPGPTASRM
Trigger: CATTCTAGATGCCGTAGGGCCAGGTGAGCTGCTGTGAAGGACTCATTCTTGGTAGCCGGCAGTTACTGGCAACTTGTGAGCTTGGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CAA 90 bp GCAGCCACCACCATTTCCAGAACATTCTCTCACCCCATAAAGAAGCCCCATCCCCGGCCAGCCAGCTGTTaGCGGATTTCAGGTAGGAGT +
Preference number: 5 (lower is better)
Translates to: AATTISRTFSHPIKKPHPRPASC*RISGRS
Trigger: ACTCCTACCTGAAATCCGCAAACAGCTGGCTGGCCG...GGGATGGGGCTTCTTTATGGGGTGAGAGAATGTTCTGGAAATGGTGGTGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CAA 90 bp TTTTGTGAGGACATGTTTTTCTCTTGGGCGACTCCTAGGAGTGGAGCTGCTGGGCCCCCGAAGAAGCCCTaGACATTCTCAGTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: FCEDMFFSWATPRSGAAGPPKKP*TFSVLA
Trigger: GGCCAGGACTGAGAATGTCAAGGGCTTCTTCGGGGG...CCCAGCAGCTCCACTCCTAGGAGTCGCCCAAGAGAAAAACATGTCCTCACAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CAA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTCGCTTCTCCTGGGGTTaGTTCTCGTCTTCCTCGTTC +
Preference number: 5 (lower is better)
Translates to: STLFLETLLGSLAVLWSGRFSWG*FSSSSF
Trigger: GAACGAGGAAGACGAGAACAAACCCCAGGAGAAGCG...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TCTCTTGGGCGACTCCTAGGAGTGGAGCTGCTGGGTCACAGAGTAACTCTTGTGCGCTTCTCCTGGGGTTaGTTCTCGTCTTCCTCGTTC +
Preference number: 5 (lower is better)
Translates to: SLGRLLGVELLGHRVTLVRFSWG*FSSSSF
Trigger: GAACGAGGAAGACGAGAACAAACCCCAGGAGAAGCG...CACAAGAGTTACTCTGTGACCCAGCAGCTCCACTCCTAGGAGTCGCCCAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CAA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGTCATTGCACAGCTTCTaGTTCAGTCCAAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: QCPRTVKQKALDPACRCWSLHSF*FSPKAS
Trigger: GCTGGCCTTTGGACTGAACAAGAAGCTGTGCAATGA...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTGGCCACGCCACTGGCTaGCCCTGCACGTTGCACAGA +
Preference number: 5 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSAGHATG*PCTLHR
Trigger: TCTGTGCAACGTGCAGGGCAAGCCAGTGGCGTGGCC...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CCCGGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTGGGGCTTTCACTTGTGTGAGTaGTTTGCATTTTGGTTCACT +
Preference number: 5 (lower is better)
Translates to: PGRMAHGLSPPAECDLWGFHLCE*FAFWFT
Trigger: AGTGAACCAAAATGCAAACAACTCACACAAGTGAAA...GCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTCCATCGGTCACAGGATaGATTCCGTCCCTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: STLFLETLLGSLAVLWSGPSVTG*IPSLSW
Trigger: CCAGGAAAGGGACGGAATCAATCCTGTGACCGATGG...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATGAGACACACTTGGAGTaGCAGCGCTGGGCACTCACG +
Preference number: 5 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYETHLE*QRWALT
Trigger: CGTGAGTGCCCAGCGCTGCAACTCCAAGTGTGTCTC...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CCGGGCAATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCGAGACACACTTGGAGTaGCAGCGCTGGGCACTCACG +
Preference number: 5 (lower is better)
Translates to: PGNLSSAVSLGICSSGHFETHLE*QRWALT
Trigger: CGTGAGTGCCCAGCGCTGCAACTCCAAGTGTGTCTC...GAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CAA 90 bp CAACAGATAGTGGGACCCAGGAAGGTCAGGCCTGTAGCTTCCAGCCCTGGCTTCACTAAGCAGCTTGTATaGCTCTTCATCCAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: QQIVGPRKVRPVASSPGFTKQLV*LFIQVA
Trigger: GGCAACCTGGATGAAGAGCAATACAAGCTGCTTAGT...GAAGCCAGGGCTGGAAGCTACAGGCCTGACCTTCCTGGGTCCCACTATCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGTGGTCACTAAGCAGCTaGTATTGCTCTTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: QCPRTVKQKALDPACRCWWSLSS*YCSSSR
Trigger: CCTGGATGAAGAGCAATACAAGCTGCTTAGTGACCA...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTTCTTTCCTGTGCTTCTaGCGAGGGACACACAGCACA +
Preference number: 5 (lower is better)
Translates to: STLFLETLLGSLAVLWSGSFLCF*RGTHST
Trigger: TGTGCTGTGTGTCCCTCGCAAGAAGCACAGGAAAGA...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACGTGTATTATCTGCAGTaGGCATCAGAGCGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDVYYLQ*ASERGV
Trigger: CACCCCTCGCTCTGATGCCAACTGCAGATAATACAC...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGGAAAGAAGACGAGACTaGGTGATGTCTGTGATTCCC +
Preference number: 5 (lower is better)
Translates to: QCPRTVKQKALDPACRCWERRRD*VMSVIP
Trigger: GGGAATCACAGACATCACCAAGTCTCGTCTTCTTTC...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTGAGCGAGAGGCCTGTTaGGTTTCAACTCACAGGAAG +
Preference number: 5 (lower is better)
Translates to: STLFLETLLGSLAVLWSGEREAC*VSTHRK
Trigger: CTTCCTGTGAGTTGAAACCAAACAGGCCTCTCGCTC...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp AGGGACACTTTGGCACATGGATGGGGGTCGCAGACACAGGCAGAGGAGATGAGGATGTGCTTCTTCCATTaGGTGTCTCAGGCACCAACA +
Preference number: 5 (lower is better)
Translates to: RDTLAHGWGSQTQAEEMRMCFFH*VSQAPT
Trigger: TGTTGGTGCCTGAGACACCAAATGGAAGAAGCACAT...CCTCATCTCCTCTGCCTGTGTCTGCGACCCCCATCCATGTGCCAAAGTGTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CAGTGTCCACGCACGGTGAAACAGAAGGCTCTGGACCCAGCATGCAGGTGTTGGCTAGTGTTCCAACGTTaGCCTTCTCTTTCTCCACGT +
Preference number: 5 (lower is better)
Translates to: QCPRTVKQKALDPACRCWLVFQR*PSLSPR
Trigger: ACGTGGAGAAAGAGAAGGCAAACGTTGGAACACTAG...CCAACACCTGCATGCTGGGTCCAGAGCCTTCTGTTTCACCGTGCGTGGACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS GCA 90 bp AAGTCATTGCACAGCTTCTTGTTCAGTCCAAAGGCCAGCATGTTGTaGGTGAATGTGCTGCAGGAGAAACCCCAAGAGCGTCACCCGCTG +
Preference number: 5 (lower is better)
Translates to: KSLHSFLFSPKASML*VNVLQEKPQERHPL
Trigger: CAGCGGGTGACGCTCTTGGGGTTTCTCCTGCAGCACATTCACGCACAACATGCTGGCCTTTGGACTGAACAAGAAGCTGTGCAATGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS CCA 90 bp CGGAGTGCGACCTCTGGGGCCTACTCAGTGGCCATTTGCTCAATGTaGTCACTAAGCAGCTTGTATTGCTCTTCATCCAGGTTGCCAATC +
Preference number: 5 (lower is better)
Translates to: RSATSGAYSVAICSM*SLSSLYCSSSRLPI
Trigger: GATTGGCAACCTGGATGAAGAGCAATACAAGCTGCTTAGTGACCACATTGAGCAAATGGCCACTGAGTAGGCCCCAGAGGTCGCACTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562388.1
ENST00000562564.1
ENST00000562580.5
ENST00000566428.5
ENST00000683363.1
CDS-3UTR CAA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATGACTCGGTGCTCTGGTaGGAGGAGAAGGACTCGTTG +
Preference number: 5 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYDSVLW*EEKDSL
Trigger: CAACGAGTCCTTCTCCTCCAACCAGAGCACCGAGTC...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CTCTTGTGTTTCACCTTTAAAGGAACTGCCAGACTGTTTCTCAGCGGCTGCTCAGCCTCTGAGACACACTaGGAGTTGCAGCGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: LLCFTFKGTARLFLSGCSASETH*ELQRWA
Trigger: TGCCCAGCGCTGCAACTCCAAGTGTGTCTCAGAGGC...TGAGCAGCCGCTGAGAAACAGTCTGGCAGTTCCTTTAAAGGTGAAACACAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CAA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCTACTCAGTGGCCATTaGCTCAATGTGGTCACTAAG +
Preference number: 5 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWLLSGH*LNVVTK
Trigger: CTTAGTGACCACATTGAGCAAATGGCCACTGAGTAG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCTTCCCCTCCTCCCTCTaGGTCTCATCTCACAAGCCT +
Preference number: 5 (lower is better)
Translates to: APDTHSVIQPICSTDCCLFPSSL*VSSHKP
Trigger: AGGCTTGTGAGATGAGACCAAGAGGGAGGAGGGGAA...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CCCTCCTCCCTCTTGGTCTCATCTCACAAGCCTGGCACTCGGGGTACAACTGGTAAAGAGCAGCACTGTTaGCTTTCAGAAAGGGTGGTT +
Preference number: 5 (lower is better)
Translates to: PSSLLVSSHKPGTRGTTGKEQHC*LSERVV
Trigger: AACCACCCTTTCTGAAAGCAAACAGTGCTGCTCTTT...ACCAGTTGTACCCCGAGTGCCAGGCTTGTGAGATGAGACCAAGAGGGAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCAAAAGAGCAGCACTGTTaGCTTTCAGAAAGGGTGGTT +
Preference number: 5 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPAKEQHC*LSERVV
Trigger: AACCACCCTTTCTGAAAGCAAACAGTGCTGCTCTTT...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTGTGTATTATCTGCAGTaGGCATCAGAGCGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: VPESADKVGSWVLPKSYCVYYLQ*ASERGV
Trigger: CACCCCTCGCTCTGATGCCAACTGCAGATAATACAC...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TGCTCTGTCTGTGGTCTTAGCCTGTGCGAGCCAGGCGGGGTGCAGCTGGCATCCTTTCACTTGTGTGAGTaGTTTGCATTTTGGTTCACT +
Preference number: 5 (lower is better)
Translates to: CSVCGLSLCEPGGVQLASFHLCE*FAFWFT
Trigger: AGTGAACCAAAATGCAAACAACTCACACAAGTGAAA...GGATGCCAGCTGCACCCCGCCTGGCTCGCACAGGCTAAGACCACAGACAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TTTGGTTCACTAGGATTGGCACAGCCCTCAAGGTCGGGCGGCAGAGTGCCTGCAGAGCGGGACACAAGATaGCAAAAATGCAACAGAGAA +
Preference number: 5 (lower is better)
Translates to: FGSLGLAQPSRSGGRVPAERDTR*QKCNRE
Trigger: TTCTCTGTTGCATTTTTGCAATCTTGTGTCCCGCTC...TGCAGGCACTCTGCCGCCCGACCTTGAGGGCTGTGCCAATCCTAGTGAACCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGAGACTCGGTGCTCTGGTaGGAGGAGAAGGACTCGTTG +
Preference number: 5 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGDSVLW*EEKDSL
Trigger: CAACGAGTCCTTCTCCTCCAACCAGAGCACCGAGTC...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCCCCCCGAAGAAGCCCTaGACATTCTCAGTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSPPKKP*TFSVLA
Trigger: GGCCAGGACTGAGAATGTCAAGGGCTTCTTCGGGGG...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGCCAAAGGCCAGCATGTaGTGCGTGAATGTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: AACQHVLFSKQGAFHLCEPKASM*CVNVPS
Trigger: GCTGGGCACATTCACGCACAACATGCTGGCCTTTGG...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TCCACACTGTTCTTGGAAACACTACTGGGCTCCCTGGCTGTGCTGTGGTCTGGTTGGTCACTAAGCAGCTaGTATTGCTCTTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: STLFLETLLGSLAVLWSGWSLSS*YCSSSR
Trigger: CCTGGATGAAGAGCAATACAAGCTGCTTAGTGACCA...ACCAGACCACAGCACAGCCAGGGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGCCCAGCATGCAGGTGTaGGGGTCAGGCCCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: LNPMRVAWINLNIRILIWPSMQV*GSGPGP
Trigger: GGGCCCGGGGCCTGACCCCAACACCTGCATGCTGGG...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAACACAAACCCAATCCCTaGCCAGCACCAGAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAEHKPNP*PAPEAG
Trigger: CCCTGCCTCTGGTGCTGGCAAGGGATTGGGTTTGTG...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TTTGGGCATTCTGCCTGCTGGGACTGGGAACCTCTCCCTAGGAAATCACCTGACCTAGTGTTCCAACGTTaGCCTTCTCTTTCTCCACGT +
Preference number: 5 (lower is better)
Translates to: FGHSACWDWEPLPRKSPDLVFQR*PSLSPR
Trigger: ACGTGGAGAAAGAGAAGGCAAACGTTGGAACACTAG...GTCAGGTGATTTCCTAGGGAGAGGTTCCCAGTCCCAGCAGGCAGAATGCCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTGTCACTGCACGCCACTaGGGGGCTACCAACAAGGTA +
Preference number: 5 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSAVTARH*GATNKV
Trigger: TACCTTGTTGGTAGCCCCCAAGTGGCGTGCAGTGAC...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCTTTTCACTTGTGTGAGCACCAAGCTCACAAGTaGCCAGTAACTGCCGGCTAC +
Preference number: 5 (lower is better)
Translates to: AACQHVLFSKQGAFHLCEHQAHK*PVTAGY
Trigger: GTAGCCGGCAGTTACTGGCAACTTGTGAGCTTGGTG...CTCACACAAGTGAAAAGCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGCAATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCATGACTCGGTGCTCTGGTaGGAGGAGAAGGACTCGTTG +
Preference number: 5 (lower is better)
Translates to: GQSVICCVSRNLQFWTFHDSVLW*EEKDSL
Trigger: CAACGAGTCCTTCTCCTCCAACCAGAGCACCGAGTC...ATGAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CAA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAACCAAAGGCCAGCATGTaGTGCGTGAATGTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAEPKASM*CVNVPS
Trigger: GCTGGGCACATTCACGCACAACATGCTGGCCTTTGG...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACACGCAGGAGAACAGTCTaGATGTGCTTCTTCCATTTG +
Preference number: 5 (lower is better)
Translates to: AEQPREKRISQLQPSFLTRRRTV*MCFFHL
Trigger: CAAATGGAAGAAGCACATCAAGACTGTTCTCCTGCG...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGGGGGATCCATGTGTGTaGTCTGAATTTCTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWGDPCV*SEFLAF
Trigger: AAAAGCTAGAAATTCAGACAACACACATGGATCCCC...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAAGTCACTGCACGCCACTaGGGGGCTACCAACAAGGTA +
Preference number: 5 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAEVTARH*GATNKV
Trigger: TACCTTGTTGGTAGCCCCCAAGTGGCGTGCAGTGAC...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp AAACTTTCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAAGGCAGGAGAATCACTaGAACCGGGGAGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: KLSYKNPVHTGVSPVGTARQENH*NRGGGG
Trigger: GCCTCCACCTCCCCGGTTCAAGTGATTCTCCTGCCT...TGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGAAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566428.5
CDS-3UTR CAA 90 bp TCTTCCACTGAGTTTCACGATGTTTCCCAGGTCTATCCCTGCTACAGCGTGGAGGGCTGCTCATTTACATaGCTCCTAGCCATACAGGAG +
Preference number: 5 (lower is better)
Translates to: SSTEFHDVSQVYPCYSVEGCSFT*LLAIQE
Trigger: CTCCTGTATGGCTAGGAGCAATGTAAATGAGCAGCC...CTCCACGCTGTAGCAGGGATAGACCTGGGAAACATCGTGAAACTCAGTGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS GCA 90 bp TCACGTATCGAGCAAACCACTCCCGGCCTTTTCCATTTTCACTGCTaGAGTACTCTCCAAACTTGGCTTTCTCCTCCTGATCCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: SRIEQTTPGLFHFHC*STLQTWLSPPDPSP
Trigger: AGGACTTGGATCAGGAGGAGAAAGCCAAGTTTGGAGAGTACTGCAGCAGTGAAAATGGAAAAGGCCGGGAGTGGTTTGCTCGATACGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS GCA 90 bp CACTCACGTATCGAGCAAACCACTCCCGGCCTTTTCCATTTTCACTaGTGCAGTACTCTCCAAACTTGGCTTTCTCCTCCTGATCCAAGT +
Preference number: 5 (lower is better)
Translates to: HSRIEQTTPGLFHFH*CSTLQTWLSPPDPS
Trigger: ACTTGGATCAGGAGGAGAAAGCCAAGTTTGGAGAGTACTGCAGCAGTGAAAATGGAAAAGGCCGGGAGTGGTTTGCTCGATACGTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS-3UTR CAA 90 bp CTTTACAGTGTGAACCTGCATTCCTCATGTCAGGGGTCTGGAATACCAAGTGCTATGGTCATGAGGTTCTaGGCAGGCCCAAAGTCATCC +
Preference number: 5 (lower is better)
Translates to: LYSVNLHSSCQGSGIPSAMVMRF*AGPKSS
Trigger: GGATGACTTTGGGCCTGCCAAGAACCTCATGACCAT...AGCACTTGGTATTCCAGACCCCTGACATGAGGAATGCAGGTTCACACTGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGCGGCCAGCCAGCTGTTaGCGGATTTCAGGTAGGAGT +
Preference number: 5 (lower is better)
Translates to: TRLQKCNREDTGVTARHLRPASC*RISGRS
Trigger: ACTCCTACCTGAAATCCGCAAACAGCTGGCTGGCCG...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp ACTCCTCCCCAACAGCCAAAGCCAAGCCAAGCTGTCTCTTGCAGGGAGATCTGGCCCTCTAGCCATTTTTaGGAAATTTCAGAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: TPPQQPKPSQAVSCREIWPSSHF*EISELF
Trigger: AAACAGCTCTGAAATTTCCAAAAAATGGCTAGAGGG...CCAGATCTCCCTGCAAGAGACAGCTTGGCTTGGCTTTGGCTGTTGGGGAGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGAAGCTCCACACTGTTCTaGGAAACACTACTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGSSTLF*ETLLGS
Trigger: GGAGCCCAGTAGTGTTTCCAAGAACAGTGTGGAGCT...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCATGTGCTTCTTCCATTaGGTGTCTCAGGCACCAACA +
Preference number: 5 (lower is better)
Translates to: APDTHSVIQPICSTDCCLMCFFH*VSQAPT
Trigger: TGTTGGTGCCTGAGACACCAAATGGAAGAAGCACAT...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CAGGAGAGCTCCAGTTTCTCCACATCCTCACCAACGCCTGTGAGTGTTCATCTTAGTGTATTCACAGAGTaGTGCAGCCACCACCATTTC +
Preference number: 5 (lower is better)
Translates to: QESSSFSTSSPTPVSVHLSVFTE*CSHHHF
Trigger: GAAATGGTGGTGGCTGCACAACTCTGTGAATACACT...AAGATGAACACTCACAGGCGTTGGTGAGGATGTGGAGAAACTGGAGCTCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CAA 90 bp TGTGTTTCACCTTTAAAGGAACTGCCAGACTGTTTCTCAGCGGCTGCTCATTTACACCAAGCTCACAAGTaGCCAGTAACTGCCGGCTAC +
Preference number: 5 (lower is better)
Translates to: CVSPLKELPDCFSAAAHLHQAHK*PVTAGY
Trigger: GTAGCCGGCAGTTACTGGCAACTTGTGAGCTTGGTG...TAAATGAGCAGCCGCTGAGAAACAGTCTGGCAGTTCCTTTAAAGGTGAAACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CAA 90 bp ATTTTTAGTGTATTCACAGAGTTGTGCAGCCACCACCATTTCCAGAACATTCTCGAGGAGAAGGACTCGTaGGAGGAGGAACGGCGGTCT +
Preference number: 5 (lower is better)
Translates to: IFSVFTELCSHHHFQNILEEKDS*EEERRS
Trigger: AGACCGCCGTTCCTCCTCCAACGAGTCCTTCTCCTC...GAGAATGTTCTGGAAATGGTGGTGGCTGCACAACTCTGTGAATACACTAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CAA 90 bp GTGTTCATCTTTTTATTCTGCCACTCTGGTGAGTGTGAGAATTCTGCCATTCTGCCAGGCGGTAGAAGGTaGCCTCTGAGACACACTTGG +
Preference number: 5 (lower is better)
Translates to: VFIFLFCHSGECENSAILPGGRR*PLRHTW
Trigger: CCAAGTGTGTCTCAGAGGCAACCTTCTACCGCCTGG...CAGAATGGCAGAATTCTCACACTCACCAGAGTGGCAGAATAAAAAGATGAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CAA 90 bp GTCCCAGAGTCTGCAGATAAAGTGGGGAGCTGGGTTCTCCCCAAATCGTACTGTTTCTTCAGGAAGTCATaGCACAGCTTCTTGTTCAGT +
Preference number: 5 (lower is better)
Translates to: VPESADKVGSWVLPKSYCFFRKS*HSFLFS
Trigger: ACTGAACAAGAAGCTGTGCAATGACTTCCTGAAGAA...ACAGTACGATTTGGGGAGAACCCAGCTCCCCACTTTATCTGCAGACTCTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GGGCAATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCATTTACCAGATGGGCTGTaGCTTCAGGTGCGTGTACAG +
Preference number: 5 (lower is better)
Translates to: GQSVICCVSRNLQFWTFHLPDGL*LQVRVQ
Trigger: CTGTACACGCACCTGAAGCAACAGCCCATCTGGTAA...ATGAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CAA 90 bp TGTGTTTCACCTTTAAAGGAACTGCCAGACTGTTTCTCAGCGGCTGCTCATTTAATGGTCATGAGGTTCTaGGCAGGCCCAAAGTCATCC +
Preference number: 5 (lower is better)
Translates to: CVSPLKELPDCFSAAAHLMVMRF*AGPKSS
Trigger: GGATGACTTTGGGCCTGCCAAGAACCTCATGACCAT...TAAATGAGCAGCCGCTGAGAAACAGTCTGGCAGTTCCTTTAAAGGTGAAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CAA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGCCCACGCAGGGACCTTaGAGCAGTGTGGCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: LNPMRVAWINLNIRILIWPTQGP*SSVAGS
Trigger: AGACCCAGCCACACTGCTCAAAGGTCCCTGCGTGGG...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TCCAACCAATCTGCAGCACAGACTGTTGTCTCTAGAGAATGTTCCGTCTCTGGACTTACGACATCAGAATaGAGTTCTCTGGCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: SNQSAAQTVVSRECSVSGLTTSE*SSLACG
Trigger: ACCACAGGCCAGAGAACTCAATTCTGATGTCGTAAG...TCCAGAGACGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAGATTGGTTGGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCGGAACAGCCTAGGGAAAAGCGAATCTCACAGCTCCAGCCTTCTTTCCTCACACCCTCTAGCCATTTTTaGGAAATTTCAGAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: AEQPREKRISQLQPSFLTPSSHF*EISELF
Trigger: AAACAGCTCTGAAATTTCCAAAAAATGGCTAGAGGG...TGTGAGGAAAGAAGGCTGGAGCTGTGAGATTCGCTTTTCCCTAGGCTGTTCCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp AAACTTTCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAGCGAGAGGCCTGTTaGGTTTCAACTCACAGGAAG +
Preference number: 5 (lower is better)
Translates to: KLSYKNPVHTGVSPVGTAEREAC*VSTHRK
Trigger: CTTCCTGTGAGTTGAAACCAAACAGGCCTCTCGCTC...TGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGAAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTCTGGCCGTTTCGCCTaGTGGCTGCGGAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVSGRFA*WLRKLR
Trigger: CCTCAGTTTCCGCAGCCACAAGGCGAAACGGCCAGA...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGGCTTCCGGGCCAGTGTaGGCCGCAGGAGAACAGTCT +
Preference number: 5 (lower is better)
Translates to: LNPMRVAWINLNIRILIWASGPV*AAGEQS
Trigger: AGACTGTTCTCCTGCGGCCAACACTGGCCCGGAAGC...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS GCA 90 bp CTAAGCAGCTTGTATTGCTCTTCATCCAGGTTGCCAATCACAGCCTaGTTCTTCAGGAAGTCATTGCACAGCTTCTTGTTCAGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: LSSLYCSSSRLPITA*FFRKSLHSFLFSPK
Trigger: CTTTGGACTGAACAAGAAGCTGTGCAATGACTTCCTGAAGAAGCAGGCTGTGATTGGCAACCTGGATGAAGAGCAATACAAGCTGCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562388.1
ENST00000562564.1
ENST00000562580.5
ENST00000566428.5
ENST00000683363.1
CDS-3UTR CAA 90 bp ACAAGATTGCAAAAATGCAACAGAGAAGATACTGGTGTCACTGCACGCCACTTGCTGCAGCACAGACTGTaGTCTCTAGAGAATGTTCCG +
Preference number: 5 (lower is better)
Translates to: TRLQKCNREDTGVTARHLLQHRL*SLENVP
Trigger: CGGAACATTCTCTAGAGACAACAGTCTGTGCTGCAG...CAAGTGGCGTGCAGTGACACCAGTATCTTCTCTGTTGCATTTTTGCAATCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TCATACAAAAATCCTGTACATACAGGGGTAAGTCCTGTGGGCACCGCAGAACAAAAAGAGCAGCACTGTTaGCTTTCAGAAAGGGTGGTT +
Preference number: 5 (lower is better)
Translates to: SYKNPVHTGVSPVGTAEQKEQHC*LSERVV
Trigger: AACCACCCTTTCTGAAAGCAAACAGTGCTGCTCTTT...TTGTTCTGCGGTGCCCACAGGACTTACCCCTGTATGTACAGGATTTTTGTATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCCCCAGACACACATTCTGTGATCCAACCAATCTGCAGCACAGACTGTTGTCTCGATTTTAGCACTGTTTaGAGATCTTCACCCTTGAAA +
Preference number: 5 (lower is better)
Translates to: APDTHSVIQPICSTDCCLDFSTV*RSSPLK
Trigger: TTTCAAGGGTGAAGATCTCAAAACAGTGCTAAAATC...GAGACAACAGTCTGTGCTGCAGATTGGTTGGATCACAGAATGTGTGTCTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp CAATCTGTCATCTGCTGTGTCTCTAGGAATCTGCAGTTCTGGACATTTCATAGGGGGATGATACAATACTaGGGCTTCTGTGTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: QSVICCVSRNLQFWTFHRGMIQY*GFCVWL
Trigger: AAGCCAGACACAGAAGCCCAAGTATTGTATCATCCC...CCTATGAAATGTCCAGAACTGCAGATTCCTAGAGACACAGCAGATGACAGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS-3UTR CAA 90 bp TTAAACCCAATGCGTGTTGCTTGGATTAACCTGAACATCAGGATTTTAATTTGGAAGGTGATGTTCTCGTaGAACCGGAGGCTGTCGTCG +
Preference number: 5 (lower is better)
Translates to: LNPMRVAWINLNIRILIWKVMFS*NRRLSS
Trigger: CGACGACAGCCTCCGGTTCAACGAGAACATCACCTT...CCAAATTAAAATCCTGATGTTCAGGTTAATCCAAGCAACACGCATTGGGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATTTTCACTTGTGTGAGTaGTTTGCATTTTGGTTCACT +
Preference number: 5 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYFHLCE*FAFWFT
Trigger: AGTGAACCAAAATGCAAACAACTCACACAAGTGAAA...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAACAGGGAGCTTTTCACTaGTGTGAGTTGTTTGCATTT +
Preference number: 5 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAEQGAFH*CELFAF
Trigger: AAATGCAAACAACTCACACAAGTGAAAAGCTCCCTG...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GAGTTCTCTGGCCTGTGGTTAAACATGCGCATGCACAGGGCAGATGCAATCTATGATTTTAGCACTGTTTaGAGATCTTCACCCTTGAAA +
Preference number: 5 (lower is better)
Translates to: EFSGLWLNMRMHRADAIYDFSTV*RSSPLK
Trigger: TTTCAAGGGTGAAGATCTCAAAACAGTGCTAAAATC...ATAGATTGCATCTGCCCTGTGCATGCGCATGTTTAACCACAGGCCAGAGAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp GCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTTTCAAAGCAGGGAGCCCCTCTAGCCATTTTTaGGAAATTTCAGAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: AKNIPCCLSTCPVFKAGSPSSHF*EISELF
Trigger: AAACAGCTCTGAAATTTCCAAAAAATGGCTAGAGGG...GCTCCCTGCTTTGAAAACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp AAAACTGTAACAAAGGCTAAAAACATACCATGCTGCCTGTCAACATGTCCTGTTCTACTCAGTGGCCATTaGCTCAATGTGGTCACTAAG +
Preference number: 5 (lower is better)
Translates to: KTVTKAKNIPCCLSTCPVLLSGH*LNVVTK
Trigger: CTTAGTGACCACATTGAGCAAATGGCCACTGAGTAG...AACAGGACATGTTGACAGGCAGCATGGTATGTTTTTAGCCTTTGTTACAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TTACAGGACAAGGGAGTGAGACGGCTGCATCCTAAGAAAAATGGTTCAGCAGAAGATTTTAGCACTGTTTaGAGATCTTCACCCTTGAAA +
Preference number: 5 (lower is better)
Translates to: LQDKGVRRLHPKKNGSAEDFSTV*RSSPLK
Trigger: TTTCAAGGGTGAAGATCTCAAAACAGTGCTAAAATC...TTCTGCTGAACCATTTTTCTTAGGATGCAGCCGTCTCACTCCCTTGTCCTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
CDS-3UTR CAA 90 bp TCACAGAGTAACTCTTGTGTTTCACCTTTAAAGGAACTGCCAGACTGTTTCTCACGGATGGACCACATTTaGTTTACCCATTCATCACTG +
Preference number: 5 (lower is better)
Translates to: SQSNSCVSPLKELPDCFSRMDHI*FTHSSL
Trigger: CAGTGATGAATGGGTAAACAAAATGTGGTCCATCCG...TGAGAAACAGTCTGGCAGTTCCTTTAAAGGTGAAACACAAGAGTTACTCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS GCA 72 bp CGGACCGGGCAGCGAACCGGCGCCGTCAGACTCGGCTaGTGCGGCGACTGCGCCGCCCGCGAGCAGCCGGGT +
Preference number: 6 (lower is better)
Translates to: RTGQRTGAVRLG*CGDCAAREQPG
Trigger: ACCCGGCTGCTCGCGGGCGGCGCAGTCGCCGCAGCAGCCGAGTCTGACGGCGCCGGTTCGCTGCCCGGTCCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258180.7
ENST00000538274.5
CDS GCA 72 bp CGAACCGGCGCCGTCAGACTCGGCTGCTGCGGCGACTaGGCCGCCCGCGAGCAGCCGGGTCCTTTCCCGGCG +
Preference number: 6 (lower is better)
Translates to: RTGAVRLGCCGD*AAREQPGPFPA
Trigger: CGCCGGGAAAGGACCCGGCTGCTCGCGGGCGGCGCAGTCGCCGCAGCAGCCGAGTCTGACGGCGCCGGTTCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258180.7
ENST00000538274.5
CDS CCA 72 bp CACCCGCTGGCCTCCCAGGGGAAAGGGCCGGGGAGCTaGGCCCTTGTCTCTGGGACGCCCACCATGGCCTGC +
Preference number: 6 (lower is better)
Translates to: HPLASQGKGPGS*ALVSGTPTMAC
Trigger: GCAGGCCATGGTGGGCGTCCCAGAGACAAGGGCCCAGCTCCCCGGCCCTTTCCCCTGGGAGGCCAGCGGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS CCA 72 bp CCAGGGGAAAGGGCCGGGGAGCTGGGCCCTTGTCTCTaGGACGCCCACCATGGCCTGCCTGGAATTGTCAGC +
Preference number: 6 (lower is better)
Translates to: PGERAGELGPCL*DAHHGLPGIVS
Trigger: GCTGACAATTCCAGGCAGGCCATGGTGGGCGTCCCAGAGACAAGGGCCCAGCTCCCCGGCCCTTTCCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS GCA 72 bp GCCAGCTGTTTGCGGATTTCAGGTAGGAGTCGATGCTaGCCGCGGGCTTCTCCCGGGACTCCGGGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: ASCLRISGRSRC*PRASPGTPGAA
Trigger: TGCTGCCCCCGGAGTCCCGGGAGAAGCCCGCGGGCAGCATCGACTCCTACCTGAAATCCGCAAACAGCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS GCA 72 bp CCAGCCAGCTGTTTGCGGATTTCAGGTAGGAGTCGATaGTGCCCGCGGGCTTCTCCCGGGACTCCGGGGGCA +
Preference number: 6 (lower is better)
Translates to: PASCLRISGRSR*CPRASPGTPGA
Trigger: TGCCCCCGGAGTCCCGGGAGAAGCCCGCGGGCAGCATCGACTCCTACCTGAAATCCGCAAACAGCTGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS GCA 72 bp TGGGCCCGGGAGAATGGCACATGGCCTCAGTCCTCCTaGGGAGTGCGACCTCTGGGGCCTACTCAGTGGCCA +
Preference number: 6 (lower is better)
Translates to: WARENGTWPQSS*GVRPLGPTQWP
Trigger: TGGCCACTGAGTAGGCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCCGGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562388.1
ENST00000562580.5
ENST00000566428.5
ENST00000683363.1
CDS CCA 72 bp GAGGAGAAGGACTCGTTGGAGGAGGAACGGCGGTCTTaGTCCCAGGACGGGTGCGAGGGCGACTCGCCCATG +
Preference number: 6 (lower is better)
Translates to: EEKDSLEEERRS*SQDGCEGDSPM
Trigger: CATGGGCGAGTCGCCCTCGCACCCGTCCTGGGACCAAGACCGCCGTTCCTCCTCCAACGAGTCCTTCTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS CAA 72 bp GGAGGAGAAGGACTCGTTGGAGGAGGAACGGCGGTCTaGGTCCCAGGACGGGTGCGAGGGCGACTCGCCCAT +
Preference number: 6 (lower is better)
Translates to: GGEGLVGGGTAV*VPGRVRGRLAH
Trigger: ATGGGCGAGTCGCCCTCGCACCCGTCCTGGGACCAAGACCGCCGTTCCTCCTCCAACGAGTCCTTCTCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS CCA 72 bp CGGCTACCAAGAATGAGTCCTTCACAGCAGCTCACCTaGCCCTACGGCATCGCGGGCGGACCGGGCAGCGAA +
Preference number: 6 (lower is better)
Translates to: RLPRMSPSQQLT*PYGIAGGPGSE
Trigger: TTCGCTGCCCGGTCCGCCCGCGATGCCGTAGGGCCAGGTGAGCTGCTGTGAAGGACTCATTCTTGGTAGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258180.7
CDS CCA 72 bp GGGCTGTACGCGGTCACAGCCCTGGGCCGCTTCTCCTaGGGTTTGTTCTCGTCTTCCTCGTTCCTCCTGGCC +
Preference number: 6 (lower is better)
Translates to: GLYAVTALGRFS*GLFSSSSFLLA
Trigger: GGCCAGGAGGAACGAGGAAGACGAGAACAAACCCCAGGAGAAGCGGCCCAGGGCTGTGACCGCGTACAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS CAA 72 bp TACGCGGTCACAGCCCTGGGCCGCTTCTCCTGGGGTTaGTTCTCGTCTTCCTCGTTCCTCCTGGCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: YAVTALGRFSWG*FSSSSFLLARG
Trigger: GCCCCTGGCCAGGAGGAACGAGGAAGACGAGAACAAACCCCAGGAGAAGCGGCCCAGGGCTGTGACCGCGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS GCA 72 bp TTGGAGGAGGAACGGCGGTCTTGGTCCCAGGACGGGTaGGAGGGCGACTCGCCCATGTCATTCTCACTGTCC +
Preference number: 6 (lower is better)
Translates to: LEEERRSWSQDG*EGDSPMSFSLS
Trigger: GGACAGTGAGAATGACATGGGCGAGTCGCCCTCGCACCCGTCCTGGGACCAAGACCGCCGTTCCTCCTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS CAA 90 bp TCATCCTGGGTAGACTCGGTGCTCTGGTTGGAGGAGAAGGACTCGTaGGAGGAGGAACGGCGGTCTTGGTCCCAGGACGGGTGCGAGGGC +
Preference number: 6 (lower is better)
Translates to: SSWVDSVLWLEEKDS*EEERRSWSQDGCEG
Trigger: GCCCTCGCACCCGTCCTGGGACCAAGACCGCCGTTCCTCCTCCAACGAGTCCTTCTCCTCCAACCAGAGCACCGAGTCTACCCAGGATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS CAA 90 bp TCAGCAGCCGCTCGGCGATGTCCTTCTTTTCGGCCAGCCAGCTGTTaGCGGATTTCAGGTAGGAGTCGATGCTGCCCGCGGGCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: SAAARRCPSFRPASC*RISGRSRCCPRASP
Trigger: GGGAGAAGCCCGCGGGCAGCATCGACTCCTACCTGAAATCCGCAAACAGCTGGCTGGCCGAAAAGAAGGACATCGCCGAGCGGCTGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS GCA 72 bp GGGAGAATGGCACATGGCCTCAGTCCTCCTGCGGAGTaGGACCTCTGGGGCCTACTCAGTGGCCATTTGCTC +
Preference number: 6 (lower is better)
Translates to: GRMAHGLSPPAE*DLWGLLSGHLL
Trigger: GAGCAAATGGCCACTGAGTAGGCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGCCATTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562388.1
ENST00000562580.5
ENST00000566428.5
ENST00000683363.1
CDS CAA 72 bp GTAGACTCGGTGCTCTGGTTGGAGGAGAAGGACTCGTaGGAGGAGGAACGGCGGTCTTGGTCCCAGGACGGG +
Preference number: 6 (lower is better)
Translates to: VDSVLWLEEKDS*EEERRSWSQDG
Trigger: CCCGTCCTGGGACCAAGACCGCCGTTCCTCCTCCAACGAGTCCTTCTCCTCCAACCAGAGCACCGAGTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS CAA 72 bp GTGAATGTGCCCAGCTGCCCGAAGGTGATGTTCTCGTaGAACCGGAGGCTGTCGTCGCGCTCCTCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: VNVPSCPKVMFS*NRRLSSRSSWV
Trigger: GACCCAGGAGGAGCGCGACGACAGCCTCCGGTTCAACGAGAACATCACCTTCGGGCAGCTGGGCACATTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562564.1
ENST00000562580.5
ENST00000566428.5
ENST00000683363.1
CDS CAA 72 bp CGGGAAGCCGCGGGCTCGGCCTTACCAGATGGGCTGTaGCTTCAGGTGCGTGTACAGGTAGATCTTCTCCCC +
Preference number: 6 (lower is better)
Translates to: REAAGSALPDGL*LQVRVQVDLLP
Trigger: GGGGAGAAGATCTACCTGTACACGCACCTGAAGCAACAGCCCATCTGGTAAGGCCGAGCCCGCGGCTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS TCA 72 bp ATTCTCACTGTCCGCAGACTCAGTGGTCTCACTCTCTaGTGCACCGTCCCCCAGGGAGCCATCGCCGTCCTG +
Preference number: 6 (lower is better)
Translates to: ILTVRRLSGLTL*CTVPQGAIAVL
Trigger: CAGGACGGCGATGGCTCCCTGGGGGACGGTGCATCAGAGAGTGAGACCACTGAGTCTGCGGACAGTGAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS GCA 72 bp CTCGGCGATGTCCTTCTTTTCGGCCAGCCAGCTGTTTaGGGATTTCAGGTAGGAGTCGATGCTGCCCGCGGG +
Preference number: 6 (lower is better)
Translates to: LGDVLLFGQPAV*GFQVGVDAARG
Trigger: CCCGCGGGCAGCATCGACTCCTACCTGAAATCCGCAAACAGCTGGCTGGCCGAAAAGAAGGACATCGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS CCA 72 bp GCACATGGCCTCAGTCCTCCTGCGGAGTGCGACCTCTaGGGCCTACTCAGTGGCCATTTGCTCAATGTGGTC +
Preference number: 6 (lower is better)
Translates to: AHGLSPPAECDL*GLLSGHLLNVV
Trigger: GACCACATTGAGCAAATGGCCACTGAGTAGGCCCCAGAGGTCGCACTCCGCAGGAGGACTGAGGCCATGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562388.1
ENST00000562580.5
ENST00000566428.5
ENST00000683363.1
CDS CCA 72 bp TTCTCGTTGAACCGGAGGCTGTCGTCGCGCTCCTCCTaGGTCATGTGGCACCACTTCTCCCTGGTAGTGGGA +
Preference number: 6 (lower is better)
Translates to: FSLNRRLSSRSS*VMWHHFSLVVG
Trigger: TCCCACTACCAGGGAGAAGTGGTGCCACATGACCCAGGAGGAGCGCGACGACAGCCTCCGGTTCAACGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538274.5
ENST00000562580.5
CDS CCA 72 bp TTCTCGTTGAACCGGAGGCTGTCGTCGCGCTCCTCCTaGGTCATGTGGCACCACTTCTCCCAGATGGGCTGT +
Preference number: 6 (lower is better)
Translates to: FSLNRRLSSRSS*VMWHHFSQMGC
Trigger: ACAGCCCATCTGGGAGAAGTGGTGCCACATGACCCAGGAGGAGCGCGACGACAGCCTCCGGTTCAACGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562564.1
CDS CCA 72 bp CGGGGAGCTGGGCCCTTGTCTCTGGGACGCCCACCATaGCCTGCCTGGAATTGTCAGCAGAAACTAAAACGC +
Preference number: 6 (lower is better)
Translates to: RGAGPLSLGRPP*PAWNCQQKLKR
Trigger: GCGTTTTAGTTTCTGCTGACAATTCCAGGCAGGCCATGGTGGGCGTCCCAGAGACAAGGGCCCAGCTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS CCA 72 bp AGGGTGACGGGAAGCCGCGGGCTCGGCCTTACCAGATaGGCTGTTGCTTCAGGTGCGTGTACAGGTAGATCT +
Preference number: 6 (lower is better)
Translates to: RVTGSRGLGLTR*AVASGACTGRS
Trigger: AGATCTACCTGTACACGCACCTGAAGCAACAGCCCATCTGGTAAGGCCGAGCCCGCGGCTTCCCGTCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567328.5
CDS CAA 72 bp GCTCGGCGATGTCCTTCTTTTCGGCCAGCCAGCTGTTaGCGGATTTCAGGTAGGAGTCGATGCTGCCCGCGG +
Preference number: 6 (lower is better)
Translates to: ARRCPSFRPASC*RISGRSRCCPR
Trigger: CCGCGGGCAGCATCGACTCCTACCTGAAATCCGCAAACAGCTGGCTGGCCGAAAAGAAGGACATCGCCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562580.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS CAA 90 bp CTGAGTGCCAGGGTCTCTTCATCCTGGGTAGACTCGGTGCTCTGGTaGGAGGAGAAGGACTCGTTGGAGGAGGAACGGCGGTCTTGGTCC +
Preference number: 6 (lower is better)
Translates to: LSARVSSSWVDSVLW*EEKDSLEEERRSWS
Trigger: GGACCAAGACCGCCGTTCCTCCTCCAACGAGTCCTTCTCCTCCAACCAGAGCACCGAGTCTACCCAGGATGAAGAGACCCTGGCACTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS CAA 90 bp ATGTTGTGCGTGAATGTGCCCAGCTGCCCGAAGGTGATGTTCTCGTaGAACCGGAGGCTGTCGTCGCGCTCCTCCTGGGTCATGTGGCAC +
Preference number: 6 (lower is better)
Translates to: MLCVNVPSCPKVMFS*NRRLSSRSSWVMWH
Trigger: GTGCCACATGACCCAGGAGGAGCGCGACGACAGCCTCCGGTTCAACGAGAACATCACCTTCGGGCAGCTGGGCACATTCACGCACAACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562564.1
ENST00000562580.5
ENST00000566428.5
ENST00000683363.1
CDS CCA 72 bp GCCAGGGTCTCTTCATCCTGGGTAGACTCGGTGCTCTaGTTGGAGGAGAAGGACTCGTTGGAGGAGGAACGG +
Preference number: 6 (lower is better)
Translates to: ARVSSSWVDSVL*LEEKDSLEEER
Trigger: CCGTTCCTCCTCCAACGAGTCCTTCTCCTCCAACCAGAGCACCGAGTCTACCCAGGATGAAGAGACCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS CCA 72 bp GGGCCCTTGTCTCTGGGACGCCCACCATGGCCTGCCTaGAATTGTCAGCAGAAACTAAAACGCACTGCTGCC +
Preference number: 6 (lower is better)
Translates to: GPLSLGRPPWPA*NCQQKLKRTAA
Trigger: GGCAGCAGTGCGTTTTAGTTTCTGCTGACAATTCCAGGCAGGCCATGGTGGGCGTCCCAGAGACAAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS CAA 72 bp AGGGTCTCTTCATCCTGGGTAGACTCGGTGCTCTGGTaGGAGGAGAAGGACTCGTTGGAGGAGGAACGGCGG +
Preference number: 6 (lower is better)
Translates to: RVSSSWVDSVLW*EEKDSLEEERR
Trigger: CCGCCGTTCCTCCTCCAACGAGTCCTTCTCCTCCAACCAGAGCACCGAGTCTACCCAGGATGAAGAGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS GCA 72 bp AGCTGGGCCCTTGTCTCTGGGACGCCCACCATGGCCTaGCTGGAATTGTCAGCAGAAACTAAAACGCACTGC +
Preference number: 6 (lower is better)
Translates to: SWALVSGTPTMA*LELSAETKTHC
Trigger: GCAGTGCGTTTTAGTTTCTGCTGACAATTCCAGGCAGGCCATGGTGGGCGTCCCAGAGACAAGGGCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS GCA 72 bp GGAAGCCGTTCAAGCAGTAGCAGGGCCATGTCTCTCTaGCCACACACAGGAGGTTCAAGATCAAGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: GSRSSSSRAMSL*PHTGGSRSSWG
Trigger: GCCCCAGCTTGATCTTGAACCTCCTGTGTGTGGGCAGAGAGACATGGCCCTGCTACTGCTTGAACGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566428.5
CDS CCA 72 bp GCACCAGGCGGTAGAAGGTTGCCTCTGAGACACACTTaGAGTTGCAGCGCTGGGCACTCACGTATCGAGCAA +
Preference number: 6 (lower is better)
Translates to: APGGRRLPLRHT*SCSAGHSRIEQ
Trigger: TTGCTCGATACGTGAGTGCCCAGCGCTGCAACTCCAAGTGTGTCTCAGAGGCAACCTTCTACCGCCTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS CAA 72 bp GCACCACTGCAAAAGACTGCACCAGGCGGTAGAAGGTaGCCTCTGAGACACACTTGGAGTTGCAGCGCTGGG +
Preference number: 6 (lower is better)
Translates to: APLQKTAPGGRR*PLRHTWSCSAG
Trigger: CCCAGCGCTGCAACTCCAAGTGTGTCTCAGAGGCAACCTTCTACCGCCTGGTGCAGTCTTTTGCAGTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS CAA 90 bp ACTCGAACAGCACCACTGCAAAAGACTGCACCAGGCGGTAGAAGGTaGCCTCTGAGACACACTTGGAGTTGCAGCGCTGGGCACTCACGT +
Preference number: 6 (lower is better)
Translates to: TRTAPLQKTAPGGRR*PLRHTWSCSAGHSR
Trigger: ACGTGAGTGCCCAGCGCTGCAACTCCAAGTGTGTCTCAGAGGCAACCTTCTACCGCCTGGTGCAGTCTTTTGCAGTGGTGCTGTTCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS CAA 90 bp AGCTGGGCCCTTGTCTCTGGGACGCCCACCATGGCCTGCCTGGAATaGTCAGCAGAAACTAAAACGCACTGCTGCCTAATTAGCCACCAG +
Preference number: 6 (lower is better)
Translates to: SWALVSGTPTMACLE*SAETKTHCCLISHQ
Trigger: CTGGTGGCTAATTAGGCAGCAGTGCGTTTTAGTTTCTGCTGACAATTCCAGGCAGGCCATGGTGGGCGTCCCAGAGACAAGGGCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS TCA 72 bp GCTTCTTGTTCAGTCCAAAGGCCAGCATGTTGTGCGTaGATGTGCTGCAGGAGAAACCCCAAGAGCGTCACC +
Preference number: 6 (lower is better)
Translates to: ASCSVQRPACCA*MCCRRNPKSVT
Trigger: GGTGACGCTCTTGGGGTTTCTCCTGCAGCACATTCACGCACAACATGCTGGCCTTTGGACTGAACAAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS GCA 72 bp AGTAGGAGCCCACCAAGCTCACAAGTTGCCAGTAACTaGCGGCTACCAAGAATGAGTCCTTCACAGCAGCTC +
Preference number: 6 (lower is better)
Translates to: SRSPPSSQVASN*RLPRMSPSQQL
Trigger: GAGCTGCTGTGAAGGACTCATTCTTGGTAGCCGGCAGTTACTGGCAACTTGTGAGCTTGGTGGGCTCCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS GCA 72 bp CACAGCTTCTTGTTCAGTCCAAAGGCCAGCATGTTGTaGGTGAATGTGCCCAGCTGCCCGAAGGTGATGTTC +
Preference number: 6 (lower is better)
Translates to: HSFLFSPKASML*VNVPSCPKVMF
Trigger: GAACATCACCTTCGGGCAGCTGGGCACATTCACGCACAACATGCTGGCCTTTGGACTGAACAAGAAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562564.1
ENST00000562580.5
ENST00000566428.5
ENST00000683363.1
CDS CAA 72 bp TTGCACAGCTTCTTGTTCAGTCCAAAGGCCAGCATGTaGTGCGTGAATGTGCCCAGCTGCCCGAAGGTGATG +
Preference number: 6 (lower is better)
Translates to: LHSFLFSPKASM*CVNVPSCPKVM
Trigger: CATCACCTTCGGGCAGCTGGGCACATTCACGCACAACATGCTGGCCTTTGGACTGAACAAGAAGCTGTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562564.1
ENST00000562580.5
ENST00000566428.5
ENST00000683363.1
CDS CAA 90 bp AGGAAGTCATTGCACAGCTTCTTGTTCAGTCCAAAGGCCAGCATGTaGTGCGTGAATGTGCTGCAGGAGAAACCCCAAGAGCGTCACCCG +
Preference number: 6 (lower is better)
Translates to: RKSLHSFLFSPKASM*CVNVLQEKPQERHP
Trigger: CGGGTGACGCTCTTGGGGTTTCTCCTGCAGCACATTCACGCACAACATGCTGGCCTTTGGACTGAACAAGAAGCTGTGCAATGACTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS GCA 72 bp CACAGCTTCTTGTTCAGTCCAAAGGCCAGCATGTTGTaGGTGAATGTGCTGCAGGAGAAACCCCAAGAGCGT +
Preference number: 6 (lower is better)
Translates to: HSFLFSPKASML*VNVLQEKPQER
Trigger: ACGCTCTTGGGGTTTCTCCTGCAGCACATTCACGCACAACATGCTGGCCTTTGGACTGAACAAGAAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS CCA 72 bp CGGCTACCAAGAATGAGTCCTTCACAGCAGCTCACCTaGCCCTACGGCATAGTTCAGAGGGAAAAAGGAAAC +
Preference number: 6 (lower is better)
Translates to: RLPRMSPSQQLT*PYGIVQREKGN
Trigger: GTTTCCTTTTTCCCTCTGAACTATGCCGTAGGGCCAGGTGAGCTGCTGTGAAGGACTCATTCTTGGTAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566428.5
CDS CAA 72 bp CTTGTCTCTGGGACGCCCACCATGGCCTGCCTGGAATaGTCAGCAGAAACTAAAACGCACTGCTGCCTAATT +
Preference number: 6 (lower is better)
Translates to: LVSGTPTMACLE*SAETKTHCCLI
Trigger: AATTAGGCAGCAGTGCGTTTTAGTTTCTGCTGACAATTCCAGGCAGGCCATGGTGGGCGTCCCAGAGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS CAA 90 bp TTGCCAATCACAGCCTGCTTCTTCAGGAAGTCATTGCACAGCTTCTaGTTCAGTCCAAAGGCCAGCATGTTGTGCGTGAATGTGCCCAGC +
Preference number: 6 (lower is better)
Translates to: LPITACFFRKSLHSF*FSPKASMLCVNVPS
Trigger: GCTGGGCACATTCACGCACAACATGCTGGCCTTTGGACTGAACAAGAAGCTGTGCAATGACTTCCTGAAGAAGCAGGCTGTGATTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562564.1
ENST00000562580.5
ENST00000566428.5
ENST00000683363.1
CDS GCA 72 bp AAAGTCATCCATCTGATGACACTCGAACAGCACCACTaGAAAAGACTGCACCAGGCGGTAGAAGGTTGCCTC +
Preference number: 6 (lower is better)
Translates to: KVIHLMTLEQHH*KRLHQAVEGCL
Trigger: GAGGCAACCTTCTACCGCCTGGTGCAGTCTTTTGCAGTGGTGCTGTTCGAGTGTCATCAGATGGATGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS CAA 72 bp TTGCACAGCTTCTTGTTCAGTCCAAAGGCCAGCATGTaGTGCGTGAATGTGCTGCAGGAGAAACCCCAAGAG +
Preference number: 6 (lower is better)
Translates to: LHSFLFSPKASM*CVNVLQEKPQE
Trigger: CTCTTGGGGTTTCTCCTGCAGCACATTCACGCACAACATGCTGGCCTTTGGACTGAACAAGAAGCTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS CAA 90 bp TTGCCAATCACAGCCTGCTTCTTCAGGAAGTCATTGCACAGCTTCTaGTTCAGTCCAAAGGCCAGCATGTTGTGCGTGAATGTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: LPITACFFRKSLHSF*FSPKASMLCVNVLQ
Trigger: CTGCAGCACATTCACGCACAACATGCTGGCCTTTGGACTGAACAAGAAGCTGTGCAATGACTTCCTGAAGAAGCAGGCTGTGATTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562388.1
CDS GCA 72 bp GAGCAAACCACTCCCGGCCTTTTCCATTTTCACTGCTaGAGTACTCTCCAAACTTGGCTTTCTCCTCCTGAT +
Preference number: 6 (lower is better)
Translates to: EQTTPGLFHFHC*STLQTWLSPPD
Trigger: ATCAGGAGGAGAAAGCCAAGTTTGGAGAGTACTGCAGCAGTGAAAATGGAAAAGGCCGGGAGTGGTTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS GCA 72 bp ATCGAGCAAACCACTCCCGGCCTTTTCCATTTTCACTaGTGCAGTACTCTCCAAACTTGGCTTTCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: IEQTTPGLFHFH*CSTLQTWLSPP
Trigger: AGGAGGAGAAAGCCAAGTTTGGAGAGTACTGCAGCAGTGAAAATGGAAAAGGCCGGGAGTGGTTTGCTCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000566428.5
ENST00000567328.5
ENST00000683363.1
CDS GCA 72 bp GGTTGCCAATCACAGCCTGCTTCTTCAGGAAGTCATTaGACAGCTTCTTGTTCAGTCCAAAGGCCAGCATGT +
Preference number: 6 (lower is better)
Translates to: GCQSQPASSGSH*TASCSVQRPAC
Trigger: ACATGCTGGCCTTTGGACTGAACAAGAAGCTGTGCAATGACTTCCTGAAGAAGCAGGCTGTGATTGGCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562388.1
ENST00000562564.1
ENST00000562580.5
ENST00000566428.5
ENST00000683363.1
CDS GCA 72 bp TTGTATTGCTCTTCATCCAGGTTGCCAATCACAGCCTaGTTCTTCAGGAAGTCATTGCACAGCTTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: LYCSSSRLPITA*FFRKSLHSFLF
Trigger: GAACAAGAAGCTGTGCAATGACTTCCTGAAGAAGCAGGCTGTGATTGGCAACCTGGATGAAGAGCAATACAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258180.7
ENST00000538274.5
ENST00000562388.1
ENST00000562564.1
ENST00000562580.5
ENST00000566428.5
ENST00000683363.1
CDS CCA 72 bp CCATCACAACTAAATCAATCAATCAATCAATCAAACTaGACGATCGTGGCTATTTCTGATCCAGCCTCAGGC +
Preference number: 6 (lower is better)
Translates to: PSQLNQSINQSN*TIVAISDPASG
Trigger: GCCTGAGGCTGGATCAGAAATAGCCACGATCGTCCAGTTTGATTGATTGATTGATTGATTTAGTTGTGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566428.5