RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIAA0408 (Homo sapiens)

Ensembl gene IDs: ENSG00000189367

Ensembl transcript IDs: ENST00000368281.1, ENST00000465254.2, ENST00000472335.2, ENST00000483725.8, ENST00000487331.2

Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGGAGAGCAGATCATGAGTGAGCCCAGGCTTGGATTCTGTCCCTaGAATCTTGGCAGCCATGCAGACCTCTTTGAATCTCAGGTTTCC +
Preference number: 1 (lower is better)
Translates to: TGEQIMSEPRLGFCP*NLGSHADLFESQVS
Trigger: GGAAACCTGAGATTCAAAGAGGTCTGCATGGCTGCCAAGATTGCAGGGACAGAATCCAAGCCTGGGCTCACTCATGATCTGCTCTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
3UTR CCA 90 bp CTTGGGATACACTGGTGGAGAGGAACAGATAGGTTGCACAGTCCTTaGGCAGGCTCTCCATTGTCACACAACAGCATTTTCCTAACAGGT +
Preference number: 1 (lower is better)
Translates to: LGIHWWRGTDRLHSP*AGSPLSHNSIFLTG
Trigger: ACCTGTTAGGAAAATGCTGTTGTGTGACAATGGAGAGCCTGCCCAAGGACTGTGCAACCTATCTGTTCCTCTCCACCAGTGTATCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR GCA 90 bp ATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTTaGACAGTCCTTGGGCAGGCTCTCCATTGTCACACAACAGCATTT +
Preference number: 1 (lower is better)
Translates to: IPDYLGYTGGEEQIG*TVLGQALHCHTTAF
Trigger: AAATGCTGTTGTGTGACAATGGAGAGCCTGCCCAAGGACTGTGCAACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR TCA 90 bp GCTTGGATTCTGTCCCTGCAATCTTGGCAGCCATGCAGACCTCTTTaGATCTCAGGTTTCCCACCTCTAAATGAACTTGTTCTGAGTTCA +
Preference number: 1 (lower is better)
Translates to: AWILSLQSWQPCRPL*ISGFPPLNELVLSS
Trigger: TGAACTCAGAACAAGTTCATTTAGAGGTGGGAAACCTGAGATTCAAAGAGGTCTGCATGGCTGCCAAGATTGCAGGGACAGAATCCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
3UTR CCA 90 bp CATAGCATTCAGCTGCTTCTTGCTATTCTGCTGTTTCTCCATTGTTaGCCCCTTCTGCCATATAAAGACACAGCAATAAGGCACCACCTT +
Preference number: 1 (lower is better)
Translates to: HSIQLLLAILLFLHC*PLLPYKDTAIRHHL
Trigger: AAGGTGGTGCCTTATTGCTGTGTCTTTATATGGCAGAAGGGGCCAACAATGGAGAAACAGCAGAATAGCAAGAAGCAGCTGAATGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
3UTR GCA 90 bp AACTTCTGTAATATAGCAATCCAGGCCAAAGACTTAAACCATCAATaGTTCGGATCGCAGAGAAATGGTATAGTTGTGGGTAGTTCTCCG +
Preference number: 1 (lower is better)
Translates to: NFCNIAIQAKDLNHQ*FGSQRNGIVVGSSP
Trigger: CGGAGAACTACCCACAACTATACCATTTCTCTGCGATCCGAAGCATTGATGGTTTAAGTCTTTGGCCTGGATTGCTATATTACAGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465254.2
3UTR CCA 90 bp TCTTTACCTCAGGTCATGGGGTACAATGAAGTGAATTTCTCTAAATaGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACATTTGG +
Preference number: 1 (lower is better)
Translates to: SLPQVMGYNEVNFSK*FKYIIRRWLLEYIW
Trigger: CCAAATGTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCACTTCATTGTACCCCATGACCTGAGGTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR CCA 90 bp GCATCATTTATATTTTTATATTTGGCTTTGGGACATAAGGCAATATaGAGAACTTATGTGACACTGACACAAACACACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: ASFIFLYLALGHKAI*RTYVTLTQTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTTTGTGTCAGTGTCACATAAGTTCTCCATATTGCCTTATGTCCCAAAGCCAAATATAAAAATATAAATGATGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR TCA 90 bp ATGTGCATTGAACTGGTTTGTGCAGCATGTGACTGTAATTTTGAGTaGGGTTTATATTGGAAATTACTGTATGCTTGCTATGGTTTGAAT +
Preference number: 1 (lower is better)
Translates to: MCIELVCAACDCNFE*GLYWKLLYACYGLN
Trigger: ATTCAAACCATAGCAAGCATACAGTAATTTCCAATATAAACCTCACTCAAAATTACAGTCACATGCTGCACAAACCAGTTCAATGCACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
3UTR CCA 90 bp AAGATTGAGGTCAGGATTCAGTTGACGCTAGAGATGAATACTGATTaGCTATTTATTGGTTTTACTTCAACATCATGTCCTACATACAAA +
Preference number: 1 (lower is better)
Translates to: KIEVRIQLTLEMNTD*LFIGFTSTSCPTYK
Trigger: TTTGTATGTAGGACATGATGTTGAAGTAAAACCAATAAATAGCCAATCAGTATTCATCTCTAGCGTCAACTGAATCCTGACCTCAATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
3UTR CAA 90 bp CATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTaGCACAGTCCTTGGGCAGGCTCTCCATTGTCACACAACAGCATT +
Preference number: 2 (lower is better)
Translates to: HTRLLGIHWWRGTDR*HSPWAGSPLSHNSI
Trigger: AATGCTGTTGTGTGACAATGGAGAGCCTGCCCAAGGACTGTGCAACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR GCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCGAGGAACAGATAGGTTaGACAGTCCTTGGGCAGGCT +
Preference number: 2 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSEEQIG*TVLGQA
Trigger: AGCCTGCCCAAGGACTGTGCAACCTATCTGTTCCTC...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR CCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCAGGTTGCACAGTCCTTaGGCAGGCTCTCCATTGTCA +
Preference number: 2 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSRLHSP*AGSPLS
Trigger: TGACAATGGAGAGCCTGCCCAAGGACTGTGCAACCT...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR CCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCCTTTTTCATTGTAGCTaGGGGCCAAGGAAGTGGTCA +
Preference number: 2 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSLFHCS*GPRKWS
Trigger: TGACCACTTCCTTGGCCCCCAGCTACAATGAAAAAG...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR CCA 90 bp CCACCGCGCCCACCAGTTCTAAGTTCCGATACATGTACTTGCTACTTAAGAAAATCATACCAGACTACTTaGGATACACTGGTGGAGAGG +
Preference number: 2 (lower is better)
Translates to: PPRPPVLSSDTCTCYLRKSYQTT*DTLVER
Trigger: CCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGA...TTTTCTTAAGTAGCAAGTACATGTATCGGAACTTAGAACTGGTGGGCGCGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
3UTR CAA 90 bp AGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTaGGGATACACTGGTGGAGAGGAACAGATAGGTTGCACAGTCCTT +
Preference number: 2 (lower is better)
Translates to: RDPQYSKEPQIIPDY*GYTGGEEQIGCTVL
Trigger: AAGGACTGTGCAACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR TCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCACCTCTAAGTATGTATaGCTCCATGTTAAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSTSKYV*LHVKAA
Trigger: AGCTGCTTTAACATGGAGTCATACATACTTAGAGGT...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR TCA 90 bp TACTCCTCTCTGCCTCATCCTTATTCCTTTCTGAGATCAGCCCATAATATCAGTACCATGCTACAGTCTTaGGCCTTTCAAGGAAGTCTG +
Preference number: 2 (lower is better)
Translates to: YSSLPHPYSFLRSAHNISTMLQS*AFQGSL
Trigger: CAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGT...ACTGATATTATGGGCTGATCTCAGAAAGGAATAAGGATGAGGCAGAGAGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR CCA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATATCTGGATGCCCATCTaGAGGGGAGACGACGATTTG +
Preference number: 2 (lower is better)
Translates to: KEILNILRNHRSYQTTWDIWMPI*RGDDDL
Trigger: CAAATCGTCGTCTCCCCTCCAGATGGGCATCCAGAT...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465254.2
3UTR-3UTR CCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTTTTGATAGCTTCCTGTaGAAAAGGATCTTCCTGAAG +
Preference number: 2 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGFDSFL*KRIFLK
Trigger: CTTCAGGAAGATCCTTTTCCACAGGAAGCTATCAAA...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR CCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCTTTGATAGCTTCCTGTaGAAAAGGATCTTCCTGAAG +
Preference number: 2 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSFDSFL*KRIFLK
Trigger: CTTCAGGAAGATCCTTTTCCACAGGAAGCTATCAAA...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR CCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCTTTCTCCCCTCTAGCTaGAAAGCATATTATGAGAGT +
Preference number: 2 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSFLPSS*KAYYES
Trigger: ACTCTCATAATATGCTTTCCAGCTAGAGGGGAGAAA...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR CCA 90 bp TACTCCTCTCTGCCTCATCCTTATTCCTTTCTGAGATCAGCCCATAATATCAGTCTACTTGGGATACACTaGTGGAGAGGAACAGATAGG +
Preference number: 2 (lower is better)
Translates to: YSSLPHPYSFLRSAHNISLLGIH*WRGTDR
Trigger: CCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAG...ACTGATATTATGGGCTGATCTCAGAAAGGAATAAGGATGAGGCAGAGAGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR TCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTTGGGGTACAATGAAGTaGATTTCTCTAAATGGTTCA +
Preference number: 2 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGWGTMK*ISLNGS
Trigger: TGAACCATTTAGAGAAATTCACTTCATTGTACCCCA...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR GCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTCATAACCTTACTTTCTaGCACTTGCAACAAAGAATA +
Preference number: 2 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGHNLTF*HLQQRI
Trigger: TATTCTTTGTTGCAAGTGGCAGAAAGTAAGGTTATG...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR CCA 90 bp TACTCCTCTCTGCCTCATCCTTATTCCTTTCTGAGATCAGCCCATAATATCAGTTGGGGGCCAAGGAAGTaGTCAATTAATATTTGTACT +
Preference number: 2 (lower is better)
Translates to: YSSLPHPYSFLRSAHNISWGPRK*SINICT
Trigger: AGTACAAATATTAATTGACCACTTCCTTGGCCCCCA...ACTGATATTATGGGCTGATCTCAGAAAGGAATAAGGATGAGGCAGAGAGGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR CCA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACCTTTTTCATTGTAGCTaGGGGCCAAGGAAGTGGTCA +
Preference number: 2 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYLFHCS*GPRKWS
Trigger: TGACCACTTCCTTGGCCCCCAGCTACAATGAAAAAG...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR GCA 90 bp TACTCCTCTCTGCCTCATCCTTATTCCTTTCTGAGATCAGCCCATAATATCAGTCATAACCTTACTTTCTaGCACTTGCAACAAAGAATA +
Preference number: 2 (lower is better)
Translates to: YSSLPHPYSFLRSAHNISHNLTF*HLQQRI
Trigger: TATTCTTTGTTGCAAGTGGCAGAAAGTAAGGTTATG...ACTGATATTATGGGCTGATCTCAGAAAGGAATAAGGATGAGGCAGAGAGGAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR TCA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATTGGGGTACAATGAAGTaGATTTCTCTAAATGGTTCA +
Preference number: 2 (lower is better)
Translates to: KEILNILRNHRSYQTTWDWGTMK*ISLNGS
Trigger: TGAACCATTTAGAGAAATTCACTTCATTGTACCCCA...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR CCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATCCCAGTCCCTACCCCTaGAAATTTTGCTTTAGTAAT +
Preference number: 2 (lower is better)
Translates to: TLKSRCFLRITKPGKITYPSPYP*KFCFSN
Trigger: ATTACTAAAGCAAAATTTCCAGGGGTAGGGACTGGG...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR TCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATACACATTTCTATTCCTaGTGCTACTGTGGATGTCAA +
Preference number: 2 (lower is better)
Translates to: TLKSRCFLRITKPGKITYTHFYS*CYCGCQ
Trigger: TTGACATCCACAGTAGCATCAGGAATAGAAATGTGT...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR CCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATTGGGGGCCAAGGAAGTaGTCAATTAATATTTGTACT +
Preference number: 2 (lower is better)
Translates to: TLKSRCFLRITKPGKITYWGPRK*SINICT
Trigger: AGTACAAATATTAATTGACCACTTCCTTGGCCCCCA...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR TCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATCTTGCTTTACAAGGCTaGTCTATTAAACTTGTGACA +
Preference number: 2 (lower is better)
Translates to: TLKSRCFLRITKPGKITYLALQG*SIKLVT
Trigger: TGTCACAAGTTTAATAGATCAGCCTTGTAAAGCAAG...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR CCA 72 bp AGAGGATGTCAGTGTACGAGAAGCCATATGGAGTTTTaGGTGGCCAGGAGCAGGAAGTCAGGCAGGTTTGGC +
Preference number: 3 (lower is better)
Translates to: RGCQCTRSHMEF*VARSRKSGRFG
Trigger: GCCAAACCTGCCTGACTTCCTGCTCCTGGCCACCCAAAACTCCATATGGCTTCTCGTACACTGACATCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
3UTR GCA 72 bp TACTTGGGATACACTGGTGGAGAGGAACAGATAGGTTaGACAGTCCTTGGGCAGGCTCTCCATTGTCACACA +
Preference number: 3 (lower is better)
Translates to: YLGYTGGEEQIG*TVLGQALHCHT
Trigger: TGTGTGACAATGGAGAGCCTGCCCAAGGACTGTGCAACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR TCA 72 bp GATGCACATGGGACATTTATACAGGAGAGCAGATCATaGGTGAGCCCAGGCTTGGATTCTGTCCCTGCAATC +
Preference number: 3 (lower is better)
Translates to: DAHGTFIQESRS*VSPGLDSVPAI
Trigger: GATTGCAGGGACAGAATCCAAGCCTGGGCTCACTCATGATCTGCTCTCCTGTATAAATGTCCCATGTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
3UTR CCA 72 bp ACCACAGATCATACCAGACTACTTGGGATACACTGGTaGAGAGGAACAGATAGGTTGCACAGTCCTTGGGCA +
Preference number: 3 (lower is better)
Translates to: TTDHTRLLGIHW*RGTDRLHSPWA
Trigger: TGCCCAAGGACTGTGCAACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR CCA 72 bp GGAACCACAGATCATACCAGACTACTTGGGATACACTaGTGGAGAGGAACAGATAGGTTGCACAGTCCTTGG +
Preference number: 3 (lower is better)
Translates to: GTTDHTRLLGIH*WRGTDRLHSPW
Trigger: CCAAGGACTGTGCAACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR CCA 72 bp GTTTTGGGTGGCCAGGAGCAGGAAGTCAGGCAGGTTTaGCTTCAGTTGTACTACCTAGAGATATTTTGGAAG +
Preference number: 3 (lower is better)
Translates to: VLGGQEQEVRQV*LQLYYLEIFWK
Trigger: CTTCCAAAATATCTCTAGGTAGTACAACTGAAGCCAAACCTGCCTGACTTCCTGCTCCTGGCCACCCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483725.8
3UTR CCA 72 bp CAGCTGCTTCTTGCTATTCTGCTGTTTCTCCATTGTTaGCCCCTTCTGCCATATAAAGACACAGCAATAAGG +
Preference number: 3 (lower is better)
Translates to: QLLLAILLFLHC*PLLPYKDTAIR
Trigger: CCTTATTGCTGTGTCTTTATATGGCAGAAGGGGCCAACAATGGAGAAACAGCAGAATAGCAAGAAGCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
3UTR-3UTR CAA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCCCATTTAGGAAATGTTaGTTGCTGAGGCTGACAAAA +
Preference number: 3 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSPFRKC*LLRLTK
Trigger: TTTTGTCAGCCTCAGCAACAAACATTTCCTAAATGG...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR GCA 72 bp AAGCATCACATAGCATTCAGCTGCTTCTTGCTATTCTaGTGTTTCTCCATTGTTGGCCCCTTCTGCCATATA +
Preference number: 3 (lower is better)
Translates to: KHHIAFSCFLLF*CFSIVGPFCHI
Trigger: TATATGGCAGAAGGGGCCAACAATGGAGAAACAGCAGAATAGCAAGAAGCAGCTGAATGCTATGTGATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
3UTR GCA 72 bp AATATAGCAATCCAGGCCAAAGACTTAAACCATCAATaGTTCGGATCGCAGAGAAATGGTATAGTTGTGGGT +
Preference number: 3 (lower is better)
Translates to: NIAIQAKDLNHQ*FGSQRNGIVVG
Trigger: ACCCACAACTATACCATTTCTCTGCGATCCGAAGCATTGATGGTTTAAGTCTTTGGCCTGGATTGCTATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465254.2
3UTR-3UTR CAA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCACCATTTAGGAAATGTTaGTTGCTGAGGCTGACAAAA +
Preference number: 3 (lower is better)
Translates to: YESRHHHATVLSLSRKSAPFRKC*LLRLTK
Trigger: TTTTGTCAGCCTCAGCAACAAACATTTCCTAAATGG...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR CAA 90 bp TACTCCTCTCTGCCTCATCCTTATTCCTTTCTGAGATCAGCCCATAATATCAGTATAAGGAGATGGCTCTaGGAATACATTTGGCATAAG +
Preference number: 3 (lower is better)
Translates to: YSSLPHPYSFLRSAHNISIRRWL*EYIWHK
Trigger: CTTATGCCAAATGTATTCCAAGAGCCATCTCCTTAT...ACTGATATTATGGGCTGATCTCAGAAAGGAATAAGGATGAGGCAGAGAGGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR CAA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATTGGGCAGGCTCTCCATaGTCACACAACAGCATTTTC +
Preference number: 3 (lower is better)
Translates to: TLKSRCFLRITKPGKITYWAGSP*SHNSIF
Trigger: GAAAATGCTGTTGTGTGACAATGGAGAGCCTGCCCA...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR CCA 72 bp CAGGTCATGGGGTACAATGAAGTGAATTTCTCTAAATaGTTCAAATACATCATAAGGAGATGGCTCTTGGAA +
Preference number: 3 (lower is better)
Translates to: QVMGYNEVNFSK*FKYIIRRWLLE
Trigger: TTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCACTTCATTGTACCCCATGACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR-3UTR CAA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATAAGTTAAGATTCAAATaGCTTGTCGGAAGAGAACAG +
Preference number: 3 (lower is better)
Translates to: KEILNILRNHRSYQTTWDKLRFK*LVGREQ
Trigger: CTGTTCTCTTCCGACAAGCAATTTGAATCTTAACTT...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR CCA 72 bp ATTCTTCTTTTTCATTGTAGCTGGGGGCCAAGGAAGTaGTCAATTAATATTTGTACTGCAAATGCCTTAAGT +
Preference number: 3 (lower is better)
Translates to: ILLFHCSWGPRK*SINICTANALS
Trigger: ACTTAAGGCATTTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAAGAAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR CCA 72 bp GTCAGGATTCAGTTGACGCTAGAGATGAATACTGATTaGCTATTTATTGGTTTTACTTCAACATCATGTCCT +
Preference number: 3 (lower is better)
Translates to: VRIQLTLEMNTD*LFIGFTSTSCP
Trigger: AGGACATGATGTTGAAGTAAAACCAATAAATAGCCAATCAGTATTCATCTCTAGCGTCAACTGAATCCTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
3UTR-3UTR CAA 90 bp TACACATTTCTATTCCTGATGCTACTGTGGATGTCAAGGTTTAGTTTAAGCCTTAAGTTAAGATTCAAATaGCTTGTCGGAAGAGAACAG +
Preference number: 3 (lower is better)
Translates to: YTFLFLMLLWMSRFSLSLKLRFK*LVGREQ
Trigger: CTGTTCTCTTCCGACAAGCAATTTGAATCTTAACTT...AAGGCTTAAACTAAACCTTGACATCCACAGTAGCATCAGGAATAGAAATGTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR GCA 90 bp GGTATAGTTGTGGGTAGTTCTCCGCAAGGCAGGGGGTGCAGATGGAGATCTGGAGGGGAGACGACGATTTaGTGGTCTAGCAGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: GIVVGSSPQGRGCRWRSGGETTI*WSSRSG
Trigger: TCCCGACCTGCTAGACCAGCAAATCGTCGTCTCCCC...TCCAGATCTCCATCTGCACCCCCTGCCTTGCGGAGAACTACCCACAACTATACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465254.2
3UTR CAA 72 bp AAGCACACAGCAGCCCTCACCAGACACCGAATCTGCTaGCAGCTTGATCTTGGACTTCCCAGCCTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: KHTAALTRHRIC*QLDLGLPSLQN
Trigger: GTTCTGGAGGCTGGGAAGTCCAAGATCAAGCTGCAAGCAGATTCGGTGTCTGGTGAGGGCTGCTGTGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp GTAGTTCTCCGCAAGGCAGGGGGTGCAGATGGAGATCTGGATGCCCATCTGGAGCTTGGGATACACTGGTaGAGAGGAACAGATAGGTTG +
Preference number: 4 (lower is better)
Translates to: VVLRKAGGADGDLDAHLELGIHW*RGTDRL
Trigger: CAACCTATCTGTTCCTCTCCACCAGTGTATCCCAAG...CTCCAGATGGGCATCCAGATCTCCATCTGCACCCCCTGCCTTGCGGAGAACTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465254.2
CDS-3UTR GCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCCAGTGGCGCGATCTCTaGTCACTGCAAGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSQWRDL*SLQALP
Trigger: AGGCAGAGCTTGCAGTGAGCAGAGATCGCGCCACTG...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp GTAGTTCTCCGCAAGGCAGGGGGTGCAGATGGAGATCTGGATGCCCATCTGGAGCCCAGTCCCTACCCCTaGAAATTTTGCTTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: VVLRKAGGADGDLDAHLEPSPYP*KFCFSN
Trigger: ATTACTAAAGCAAAATTTCCAGGGGTAGGGACTGGG...CTCCAGATGGGCATCCAGATCTCCATCTGCACCCCCTGCCTTGCGGAGAACTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000465254.2
CDS-3UTR TCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCCAGGAGAGCAGATCATaGGTGAGCCCAGGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSQESRS*VSPGLD
Trigger: ATCCAAGCCTGGGCTCACTCATGATCTGCTCTCCTG...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp GTAGTTCTCCGCAAGGCAGGGGGTGCAGATGGAGATCTGGATGCCCATCTGGAGTGGGGTACAATGAAGTaGATTTCTCTAAATGGTTCA +
Preference number: 4 (lower is better)
Translates to: VVLRKAGGADGDLDAHLEWGTMK*ISLNGS
Trigger: TGAACCATTTAGAGAAATTCACTTCATTGTACCCCA...CTCCAGATGGGCATCCAGATCTCCATCTGCACCCCCTGCCTTGCGGAGAACTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465254.2
CDS-3UTR TCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTAATAAGGCACCACCTTaGAAGCACACAGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGNKAPP*KHTAAL
Trigger: GAGGGCTGCTGTGTGCTTTCAAGGTGGTGCCTTATT...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCATCTGGATGCCCATCTaGAGGGGAGACGACGATTTG +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSIWMPI*RGDDDL
Trigger: CAAATCGTCGTCTCCCCTCCAGATGGGCATCCAGAT...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR GCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCAGGGGAGACGACGATTTaGTGGTCTAGCAGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSAGETTI*WSSRSG
Trigger: TCCCGACCTGCTAGACCAGCAAATCGTCGTCTCCCC...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR GCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCATTCATGCCATTCTCCTaGCTCAGCCTCCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSAFMPFS*LSLPSS
Trigger: GCTGCTCGGGAGGCTGAGGCAGGAGAATGGCATGAA...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTCACCATAATTTGACCTaGGATCAGCTGACCTCGGAC +
Preference number: 4 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGHHNLT*DQLTSD
Trigger: GTCCGAGGTCAGCTGATCCCAGGTCAAATTATGGTG...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCGTACGAGAAGCCATATaGAGTTTTGGGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSVREAI*SFGWPG
Trigger: TCCTGGCCACCCAAAACTCCATATGGCTTCTCGTAC...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCAGGTATCACAGGGCTTaGGATCCTCCGATGATTTTG +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSRYHRA*DPPMIL
Trigger: CAAAATCATCGGAGGATCTCAAGCCCTGTGATACCT...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR TCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTACCATGCTACAGTCTTaGGCCTTTCAAGGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGTMLQS*AFQGSL
Trigger: CAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGT...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR GCA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAAGCGATCTCTGCTCACTaGAAGCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQAISAH*KLCLPG
Trigger: ACCCGGGAGGCAGAGCTTGCAGTGAGCAGAGATCGC...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCTGCTCTGGAGCACATTaGTACAGCTCAGATTCTTCC +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSCSGAH*YSSDSS
Trigger: GGAAGAATCTGAGCTGTACCAATGTGCTCCAGAGCA...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTCTACTTGGGATACACTaGTGGAGAGGAACAGATAGG +
Preference number: 4 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGLLGIH*WRGTDR
Trigger: CCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAG...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTTCATACCAGACTACTTaGGATACACTGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGSYQTT*DTLVER
Trigger: CCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGA...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR TCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCATGTGGCACCACCACTaGCATCAGAATTACATTTGG +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSMWHHH*HQNYIW
Trigger: CCAAATGTAATTCTGATGTCAGTGGTGGTGCCACAT...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCAAGAGCAGATCATGAGTaGGCCCAGGCTTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSARADHE*AQAWIL
Trigger: CAGAATCCAAGCCTGGGCTCACTCATGATCTGCTCT...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCCCTGAGCTAGGAGTCTaGAGAGCCATCTATTTAACT +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSPELGV*RAIYLT
Trigger: AGTTAAATAGATGGCTCTTCAGACTCCTAGCTCAGG...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCGAAAATTTCGAGAGGTaGTTCTTGGAGGAGGAACTG +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSENFER*FLEEEL
Trigger: CAGTTCCTCCTCCAAGAAGCACCTCTCGAAATTTTC...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp CCACCGCGCCCACCAGTTCTAAGTTCCGATACATGTACTTGCTACTTAAGAAAAGGACTTAGGTGTCCCTaGATTTGTCTTACTAGGCCT +
Preference number: 4 (lower is better)
Translates to: PPRPPVLSSDTCTCYLRKGLRCP*ICLTRP
Trigger: AGGCCTAGTAAGACAAATGCAGGGACACCTAAGTCC...TTTTCTTAAGTAGCAAGTACATGTATCGGAACTTAGAACTGGTGGGCGCGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCAGAGGAACAGATAGGTTaGACAGTCCTTGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSAEEQIG*TVLGQA
Trigger: AGCCTGCCCAAGGACTGTGCAACCTATCTGTTCCTC...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTTTCGTAGAATTGCTCTaGAGCACATTGGTACAGCTC +
Preference number: 4 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGFVELL*STLVQL
Trigger: GAGCTGTACCAATGTGCTCCAGAGCAATTCTACGAA...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCATCGAGAGGTGCTTCTTaGAGGAGGAACTGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSASRGAS*RRNWWS
Trigger: ACTCCACCAGTTCCTCCTCCAAGAAGCACCTCTCGA...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCAATCTGGATGCCCATCTaGAGGGGAGACGACGATTTG +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSAIWMPI*RGDDDL
Trigger: CAAATCGTCGTCTCCCCTCCAGATGGGCATCCAGAT...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp CCACCGCGCCCACCAGTTCTAAGTTCCGATACATGTACTTGCTACTTAAGAAAACTTTTTCATTGTAGCTaGGGGCCAAGGAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PPRPPVLSSDTCTCYLRKLFHCS*GPRKWS
Trigger: TGACCACTTCCTTGGCCCCCAGCTACAATGAAAAAG...TTTTCTTAAGTAGCAAGTACATGTATCGGAACTTAGAACTGGTGGGCGCGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCAAGGTTGCACAGTCCTTaGGCAGGCTCTCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSARLHSP*AGSPLS
Trigger: TGACAATGGAGAGCCTGCCCAAGGACTGTGCAACCT...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp TACTCCTCTCTGCCTCATCCTTATTCCTTTCTGAGATCAGCCCATAATATCAGTAGCCATATGGAGTTTTaGGTGGCCAGGAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: YSSLPHPYSFLRSAHNISSHMEF*VARSRK
Trigger: CTTCCTGCTCCTGGCCACCCAAAACTCCATATGGCT...ACTGATATTATGGGCTGATCTCAGAAAGGAATAAGGATGAGGCAGAGAGGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCAAAGTCTCAGCTCGGTaGATCTCGATTCTTTACAAG +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSKVSAR*ISILYK
Trigger: CTTGTAAAGAATCGAGATTCACCGAGCTGAGACTTT...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCACCATGCAGACCTCTTTaGATCTCAGGTTTCCCACCT +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSAPCRPL*ISGFPP
Trigger: AGGTGGGAAACCTGAGATTCAAAGAGGTCTGCATGG...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCTTCATCAGTCTTTGCTaGCAGCTTCTCATTCCTTGT +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSFISLC*QLLIPC
Trigger: ACAAGGAATGAGAAGCTGGCAGCAAAGACTGATGAA...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR GCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCACTCGGTCTCCAGTCATaGTCGTGGAGCATATTTCGA +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSALGLQS*SWSIFR
Trigger: TCGAAATATGCTCCACGAGCATGACTGGAGACCGAG...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACTCACCCAGGCTGGAGTaGAGTGGCGCGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYSPRLE*SGAISA
Trigger: AGCAGAGATCGCGCCACTGCACTCCAGCCTGGGTGA...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTGAGAAATCCTATGGATaGTCGACCACTGGTCAATTA +
Preference number: 4 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGEKSYG*STTGQL
Trigger: TAATTGACCAGTGGTCGAGCATCCATAGGATTTCTC...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCAGGCACCCAGCTGTTGTaGTCTAACCTTTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSAGTQLL*SNLSFH
Trigger: ATGGAAGGAAAGGTTAGACCACAACAGCTGGGTGCC...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTACTGAAATTTCTAAGTaGGCTACTGCTCTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGTEISK*ATALCY
Trigger: GTAGCAGAGAGCAGTAGCCCACTTAGAAATTTCAGT...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCCTGTTGTGGATTTCTTaGTGGGATTATCAGGCACAT +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSLLWIS*WDYQAH
Trigger: ATGTGCCTGATAATCCCACCAAGAAATCCACAACAG...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTGTGGAAGAAAGTGGATaGCTAGCTGTCTTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGVEESG*LAVLKR
Trigger: TCTCTTTAAGACAGCTAGCCATCCACTTTCTTCCAC...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCATGGGGAGAAATCCTATaGATGCTCGACCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSAWGEIL*MLDHWS
Trigger: TGACCAGTGGTCGAGCATCCATAGGATTTCTCCCCA...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCCTGTTTCTCCATTGTTaGCCCCTTCTGCCATATAAA +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSLFLHC*PLLPYK
Trigger: TTTATATGGCAGAAGGGGCCAACAATGGAGAAACAG...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTACCTCTAAGTATGTATaGCTCCATGTTAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGTSKYV*LHVKAA
Trigger: AGCTGCTTTAACATGGAGTCATACATACTTAGAGGT...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR TCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCACACATTTCTATTCCTaGTGCTACTGTGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSTHFYS*CYCGCQ
Trigger: TTGACATCCACAGTAGCATCAGGAATAGAAATGTGT...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR TCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCAACCATGCTACAGTCTTaGGCCTTTCAAGGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSATMLQS*AFQGSL
Trigger: CAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGT...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR TCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCATCCACAGAGCAGTACTaGCAAGTCCCTTTGAAACCT +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSASTEQY*QVPLKP
Trigger: AGGTTTCAAAGGGACTTGTCAGTACTGCTCTGTGGA...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTGATTCTTTTGAAGATTaGGGTCAGGATTCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGDSFED*GQDSVD
Trigger: GTCAACTGAATCCTGACCTCAATCTTCAAAAGAATC...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp TACTCCTCTCTGCCTCATCCTTATTCCTTTCTGAGATCAGCCCATAATATCAGTAGAGGGGCTCCTTTTTaGACCTATCCCAATGTCACA +
Preference number: 4 (lower is better)
Translates to: YSSLPHPYSFLRSAHNISRGAPF*TYPNVT
Trigger: TGTGACATTGGGATAGGTGCAAAAAGGAGCCCCTCT...ACTGATATTATGGGCTGATCTCAGAAAGGAATAAGGATGAGGCAGAGAGGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCATCTGTGTTCTCCCACTaGTTATGTAGGTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSASVFSH*LCRSMA
Trigger: TGCCATGGACCTACATAAGCAGTGGGAGAACACAGA...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTGACTTCATCCTTCTATaGTTAGACCGCTTTCGAATT +
Preference number: 4 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGDFILL*LDRFRI
Trigger: AATTCGAAAGCGGTCTAACCATAGAAGGATGAAGTC...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp CCACCGCGCCCACCAGTTCTAAGTTCCGATACATGTACTTGCTACTTAAGAAAAATTGGAAGAATGCACTaGTCATTGTTGATCATGGGG +
Preference number: 4 (lower is better)
Translates to: PPRPPVLSSDTCTCYLRKIGRMH*SLLIMG
Trigger: CCCCATGATCAACAATGACCAGTGCATTCTTCCAAT...TTTTCTTAAGTAGCAAGTACATGTATCGGAACTTAGAACTGGTGGGCGCGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCAGTTCAGAATCCGAGCTaGGAAAATTTCGAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSAVQNPS*ENFERC
Trigger: GCACCTCTCGAAATTTTCCCAGCTCGGATTCTGAAC...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTCACCATTTCATATTTTaGATTACTGGGGGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGHHFIF*ITGGRA
Trigger: TGCTCTACCCCCAGTAATCCAAAATATGAAATGGTG...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTGGACATAAGGCAATATaGAGAACTTATGTGACACTG +
Preference number: 4 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGGHKAI*RTYVTL
Trigger: CAGTGTCACATAAGTTCTCCATATTGCCTTATGTCC...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCATGGATGCTCGACCACTaGTCAATTAGCAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSAWMLDH*SISSGR
Trigger: TCTTCCACTGCTAATTGACCAGTGGTCGAGCATCCA...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTTTGTCTTCTCTTCCTTaGGAAAAGAAGGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGLSSLP*EKKAGK
Trigger: TTTTCCAGCCTTCTTTTCCCAAGGAAGAGAAGACAA...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACCTTCAAGAGCTGTACTaGGGGCGCCAGAACAGCTCT +
Preference number: 4 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYLQELY*GRQNSS
Trigger: AGAGCTGTTCTGGCGCCCTCAGTACAGCTCTTGAAG...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp TACACATTTCTATTCCTGATGCTACTGTGGATGTCAAGGTTTAGTTTAAGCCTTTGCACTGGTCATTGTTaGTCATGGGGTCCCCATGAG +
Preference number: 4 (lower is better)
Translates to: YTFLFLMLLWMSRFSLSLCTGHC*SWGPHE
Trigger: CTCATGGGGACCCCATGATCAACAATGACCAGTGCA...AAGGCTTAAACTAAACCTTGACATCCACAGTAGCATCAGGAATAGAAATGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp TACTCCTCTCTGCCTCATCCTTATTCCTTTCTGAGATCAGCCCATAATATCAGTGATATGCTACCTGTGTaGGTAGATGAGGTATCACAG +
Preference number: 4 (lower is better)
Translates to: YSSLPHPYSFLRSAHNISDMLPV*VDEVSQ
Trigger: CTGTGATACCTCATCTACTCACACAGGTAGCATATC...ACTGATATTATGGGCTGATCTCAGAAAGGAATAAGGATGAGGCAGAGAGGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCTGGGGTACAATGAAGTaGATTTCTCTAAATGGTTCA +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSWGTMK*ISLNGS
Trigger: TGAACCATTTAGAGAAATTCACTTCATTGTACCCCA...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR TCA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAAAGGTCCGTCATTTTATaGCCCAGGGTTCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQRSVIL*PRVPLS
Trigger: GGAAAGAGGAACCCTGGGTCATAAAATGACGGACCT...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR TCA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAAAATCTGCTTGCAGCTTaGTCTTGGACTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQNLLAA*SWTSQP
Trigger: AGGCTGGGAAGTCCAAGATCAAGCTGCAAGCAGATT...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATCTTGGATTCTGTCCCTaGAATCTTGGCAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: KEILNILRNHRSYQTTWDLGFCP*NLGSHA
Trigger: TGCATGGCTGCCAAGATTGCAGGGACAGAATCCAAG...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCTCACTTTCTCTGGAATaGTCTTCTCATGGTAAAGAT +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSSLSLE*SSHGKD
Trigger: ATCTTTACCATGAGAAGACCATTCCAGAGAAAGTGA...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATGAGACGACGATTTGCTaGTCTAGCAGGTCGGGAAAA +
Preference number: 4 (lower is better)
Translates to: KEILNILRNHRSYQTTWDETTIC*SSRSGK
Trigger: TTTTCCCGACCTGCTAGACCAGCAAATCGTCGTCTC...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp CCACCGCGCCCACCAGTTCTAAGTTCCGATACATGTACTTGCTACTTAAGAAAATGGGGGCCAAGGAAGTaGTCAATTAATATTTGTACT +
Preference number: 4 (lower is better)
Translates to: PPRPPVLSSDTCTCYLRKWGPRK*SINICT
Trigger: AGTACAAATATTAATTGACCACTTCCTTGGCCCCCA...TTTTCTTAAGTAGCAAGTACATGTATCGGAACTTAGAACTGGTGGGCGCGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp TACACATTTCTATTCCTGATGCTACTGTGGATGTCAAGGTTTAGTTTAAGCCTTAGGTTGCACAGTCCTTaGGCAGGCTCTCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: YTFLFLMLLWMSRFSLSLRLHSP*AGSPLS
Trigger: TGACAATGGAGAGCCTGCCCAAGGACTGTGCAACCT...AAGGCTTAAACTAAACCTTGACATCCACAGTAGCATCAGGAATAGAAATGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp CCACCGCGCCCACCAGTTCTAAGTTCCGATACATGTACTTGCTACTTAAGAAAAGGACATAAGGCAATATaGAGAACTTATGTGACACTG +
Preference number: 4 (lower is better)
Translates to: PPRPPVLSSDTCTCYLRKGHKAI*RTYVTL
Trigger: CAGTGTCACATAAGTTCTCCATATTGCCTTATGTCC...TTTTCTTAAGTAGCAAGTACATGTATCGGAACTTAGAACTGGTGGGCGCGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp TACTCCTCTCTGCCTCATCCTTATTCCTTTCTGAGATCAGCCCATAATATCAGTGCTTATGTAGGTCCATaGCAACAGTGTAAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: YSSLPHPYSFLRSAHNISAYVGP*QQCKCQ
Trigger: CTGACACTTACACTGTTGCCATGGACCTACATAAGC...ACTGATATTATGGGCTGATCTCAGAAAGGAATAAGGATGAGGCAGAGAGGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCATTTGATTTCCTCCACTaGCTAAGCTCTGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSAFDFLH*LSSALF
Trigger: AAAGAGAGCAGAGCTTAGTCAGTGGAGGAAATCAAA...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCAAGCATTTCTAAATGCTaGCTTAATGTGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSASISKC*LNVAPP
Trigger: TGGTGGTGCCACATTAAGTCAGCATTTAGAAATGCT...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCAACAGCTGTCTTTTGCTaGAACTGTTGTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSATAVFC*NCCSIW
Trigger: CCAAATGGAACAACAGTTTCAGCAAAAGACAGCTGT...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp TACTCCTCTCTGCCTCATCCTTATTCCTTTCTGAGATCAGCCCATAATATCAGTACTGACAAGTCCCTTTaGAACCTTCACCACTTTTAC +
Preference number: 4 (lower is better)
Translates to: YSSLPHPYSFLRSAHNISTDKSL*NLHHFY
Trigger: GTAAAAGTGGTGAAGGTTTCAAAGGGACTTGTCAGT...ACTGATATTATGGGCTGATCTCAGAAAGGAATAAGGATGAGGCAGAGAGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp CCACCGCGCCCACCAGTTCTAAGTTCCGATACATGTACTTGCTACTTAAGAAAATTTCCCACCTCTAAATaGACTTGTTCTGAGTTCATA +
Preference number: 4 (lower is better)
Translates to: PPRPPVLSSDTCTCYLRKFPTSK*TCSEFI
Trigger: TATGAACTCAGAACAAGTTCATTTAGAGGTGGGAAA...TTTTCTTAAGTAGCAAGTACATGTATCGGAACTTAGAACTGGTGGGCGCGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCAGTTTCTGCTCTTCTCTaGCTCCTCTTAACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSAVSALL*LLLTVS
Trigger: AGAAACAGTTAAGAGGAGGCAGAGAAGAGCAGAAAC...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAACAGGCATGTGGGCATTaGTTTTCCAAATACCGGACA +
Preference number: 4 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQQACGH*FSKYRT
Trigger: TGTCCGGTATTTGGAAAACCAATGCCCACATGCCTG...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp CCACCGCGCCCACCAGTTCTAAGTTCCGATACATGTACTTGCTACTTAAGAAAACATCAGAATTACATTTaGTCCAATTATCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PPRPPVLSSDTCTCYLRKHQNYI*SNYPGS
Trigger: GCTTCCAGGATAATTGGACCAAATGTAATTCTGATG...TTTTCTTAAGTAGCAAGTACATGTATCGGAACTTAGAACTGGTGGGCGCGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATCTTTTTCATTGTAGCTaGGGGCCAAGGAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: KEILNILRNHRSYQTTWDLFHCS*GPRKWS
Trigger: TGACCACTTCCTTGGCCCCCAGCTACAATGAAAAAG...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATCTGTCCCTGCAATCTTaGCAGCCATGCAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: TLKSRCFLRITKPGKITYLSLQS*QPCRPL
Trigger: AAGAGGTCTGCATGGCTGCCAAGATTGCAGGGACAG...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATGTAGAGCAGGTTTTCTaGAACCACGAAGTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: TLKSRCFLRITKPGKITYVEQVF*NHEVEG
Trigger: CCCCTCTACTTCGTGGTTTCAGAAAACCTGCTCTAC...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCAACACATTTCTATTCCTaGTGCTACTGTGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSATHFYS*CYCGCQ
Trigger: TTGACATCCACAGTAGCATCAGGAATAGAAATGTGT...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR TCA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACAGGTCCGTCATTTTATaGCCCAGGGTTCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYRSVIL*PRVPLS
Trigger: GGAAAGAGGAACCCTGGGTCATAAAATGACGGACCT...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR TCA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACGCTGGAAAAATAGCCTaGGCTAGGAGTCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYAGKIA*ARSLKS
Trigger: GCTCTTCAGACTCCTAGCTCAGGCTATTTTTCCAGC...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCATTAACAACAGGGATATaGTCTGAGAAACGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSALTTGI*SEKRVL
Trigger: GAGAACACGTTTCTCAGATCATATCCCTGTTGTTAA...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATGCCTCACATTCCTTTTaGTTGTCTGTAGCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: KEILNILRNHRSYQTTWDASHSF*LSVAKG
Trigger: TCCTTTGGCTACAGACAACCAAAAGGAATGTGAGGC...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATATGGGCACAGGCATGTaGGCATTGGTTTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: KEILNILRNHRSYQTTWDMGTGM*ALVFQI
Trigger: TATTTGGAAAACCAATGCCCACATGCCTGTGCCCAT...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATGAGACGACGATTTGCTaGTCTAGCAGGTCGGGAAAA +
Preference number: 4 (lower is better)
Translates to: TLKSRCFLRITKPGKITYETTIC*SSRSGK
Trigger: TTTTCCCGACCTGCTAGACCAGCAAATCGTCGTCTC...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCATTTCTCCCCTCTAGCTaGAAAGCATATTATGAGAGT +
Preference number: 4 (lower is better)
Translates to: YESRHHHATVLSLSRKSAFLPSS*KAYYES
Trigger: ACTCTCATAATATGCTTTCCAGCTAGAGGGGAGAAA...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACGTGATGAAACCAGGATaGTCTCCATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYVMKPG*SPSPDL
Trigger: GAGGTCAGGAGATGGAGACCATCCTGGTTTCATCAC...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATAGGTATCACAGGGCTTaGGATCCTCCGATGATTTTG +
Preference number: 4 (lower is better)
Translates to: TLKSRCFLRITKPGKITYRYHRA*DPPMIL
Trigger: CAAAATCATCGGAGGATCTCAAGCCCTGTGATACCT...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR GCA 90 bp TACACATTTCTATTCCTGATGCTACTGTGGATGTCAAGGTTTAGTTTAAGCCTTGCATATTTCGATAACTaGGAGGACTTAGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: YTFLFLMLLWMSRFSLSLAYFDN*EDLGVP
Trigger: AGGGACACCTAAGTCCTCGCAGTTATCGAAATATGC...AAGGCTTAAACTAAACCTTGACATCCACAGTAGCATCAGGAATAGAAATGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATCACATAGCATTCAGCTaGTTCTTGCTATTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KEILNILRNHRSYQTTWDHIAFS*FLLFCC
Trigger: ACAGCAGAATAGCAAGAAGCAGCTGAATGCTATGTG...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATACTGAAATTTCTAAGTaGGCTACTGCTCTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: KEILNILRNHRSYQTTWDTEISK*ATALCY
Trigger: GTAGCAGAGAGCAGTAGCCCACTTAGAAATTTCAGT...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATCTTGGGATACACTGGTaGAGAGGAACAGATAGGTTG +
Preference number: 4 (lower is better)
Translates to: TLKSRCFLRITKPGKITYLGIHW*RGTDRL
Trigger: CAACCTATCTGTTCCTCTCCACCAGTGTATCCCAAG...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACCTACTTGGGATACACTaGTGGAGAGGAACAGATAGG +
Preference number: 4 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYLLGIH*WRGTDR
Trigger: CCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAG...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATTCATACCAGACTACTTaGGATACACTGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TLKSRCFLRITKPGKITYSYQTT*DTLVER
Trigger: CCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGA...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp TACACATTTCTATTCCTGATGCTACTGTGGATGTCAAGGTTTAGTTTAAGCCTTGAAGTCAGGCAGGTTTaGCTTCAGTTGTACTACCTA +
Preference number: 4 (lower is better)
Translates to: YTFLFLMLLWMSRFSLSLEVRQV*LQLYYL
Trigger: TAGGTAGTACAACTGAAGCCAAACCTGCCTGACTTC...AAGGCTTAAACTAAACCTTGACATCCACAGTAGCATCAGGAATAGAAATGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATAGCAGTGGAAGAAAGTaGATGGCTAGCTGTCTTAAA +
Preference number: 4 (lower is better)
Translates to: KEILNILRNHRSYQTTWDSSGRK*MASCLK
Trigger: TTTAAGACAGCTAGCCATCCACTTTCTTCCACTGCT...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATTGTTCCTTACACATTTaGTTTCCTCCACTGACTAAG +
Preference number: 4 (lower is better)
Translates to: KEILNILRNHRSYQTTWDCSLHI*FPPLTK
Trigger: CTTAGTCAGTGGAGGAAATCAAATGTGTAAGGAACA...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACTATCCCAATGTCACATaGCCACATGCTAAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYYPNVT*PHAKSN
Trigger: GTTGGACTTAGCATGTGGTCATGTGACATTGGGATA...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAAACCTCTAAGTATGTATaGCTCCATGTTAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQTSKYV*LHVKAA
Trigger: AGCTGCTTTAACATGGAGTCATACATACTTAGAGGT...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR TCA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATTGGAAGAAGCTAGAGTaGACTGTGTACATATATGAG +
Preference number: 4 (lower is better)
Translates to: KEILNILRNHRSYQTTWDWKKLE*TVYIYE
Trigger: CTCATATATGTACACAGTTCACTCTAGCTTCTTCCA...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACACATGGATTCCTGTGTaGGTAGATGAGGTATCACAG +
Preference number: 4 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYTWIPV*VDEVSQ
Trigger: CTGTGATACCTCATCTACTCACACAGGAATCCATGT...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465254.2
CDS-3UTR TCA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAAATCATATATGTGCATTaGACTGGTTTGTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQIIYVH*TGLCSM
Trigger: CATGCTGCACAAACCAGTTCAATGCACATATATGAT...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp TACTCCTCTCTGCCTCATCCTTATTCCTTTCTGAGATCAGCCCATAATATCAGTGTGATTTTGCTGTATTaGCTGACAATTTCTATCTGT +
Preference number: 4 (lower is better)
Translates to: YSSLPHPYSFLRSAHNISVILLY*LTISIC
Trigger: ACAGATAGAAATTGTCAGGCAATACAGCAAAATCAC...ACTGATATTATGGGCTGATCTCAGAAAGGAATAAGGATGAGGCAGAGAGGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR GCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATGCAAAGAAGTGTTTCTaGTCTTCTCTGCCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TLKSRCFLRITKPGKITYAKKCF*SSLPPL
Trigger: AAGAGGAGGCAGAGAAGAGCAGAAACACTTCTTTGC...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAATCCATCTTTTCCTTATaGCAGTTAGTCTCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQSIFSL*QLVSVF
Trigger: GAACACAGAGACTAACTGGCATAAGGAAAAGATGGA...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATTCTTGGAGGAGGAACTaGTGGAGTTTCATTTCTTTT +
Preference number: 4 (lower is better)
Translates to: KEILNILRNHRSYQTTWDSWRRN*WSFISF
Trigger: AAAAGAAATGAAACTCCACCAGTTCCTCCTCCAAGA...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAATTACTAGGCCTGTTGTaGATTTCTTGGTGGGATTAT +
Preference number: 4 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQLLGLL*ISWWDY
Trigger: ATAATCCCACCAAGAAATCCACAACAGGCCTAGTAA...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAATGGGGGCCAAGGAAGTaGTCAATTAATATTTGTACT +
Preference number: 4 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQWGPRK*SINICT
Trigger: AGTACAAATATTAATTGACCACTTCCTTGGCCCCCA...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATTTTGATAGCTTCCTGTaGAAAAGGATCTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: KEILNILRNHRSYQTTWDFDSFL*KRIFLK
Trigger: CTTCAGGAAGATCCTTTTCCACAGGAAGCTATCAAA...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAAGAAGCAGACAAGTCGTaGAATATGAATTTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQEADKS*NMNLLC
Trigger: GCAAAGCAAATTCATATTCCACGACTTGTCTGCTTC...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAAATATGTGCATTGAACTaGTTTGTGCAGCATGTGACT +
Preference number: 4 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQICALN*FVQHVT
Trigger: AGTCACATGCTGCACAAACCAGTTCAATGCACATAT...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACCACATCGTTACTTTGTaGTATGCTACCTGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYHIVTL*YATCVS
Trigger: ACTCACACAGGTAGCATATCACAAAGTAACGATGTG...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATTTTTTGGTACTTGTCTaGAGAACTCATCCCCAATTT +
Preference number: 4 (lower is better)
Translates to: KEILNILRNHRSYQTTWDFLVLV*RTHPQF
Trigger: AAATTGGGGATGAGTTCTTCAGACAAGTACCAAAAA...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACTTCATCAGTCTTTGCTaGCAGCTTCTCATTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYFISLC*QLLIPC
Trigger: ACAAGGAATGAGAAGCTGGCAGCAAAGACTGATGAA...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR GCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATCAATGCAGACTCTGTTaGTGTCTCATAGGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: TLKSRCFLRITKPGKITYQCRLC*CLIGFQ
Trigger: CTGAAAACCTATGAGACAGCAACAGAGTCTGCATTG...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAATTTAGCAGGGTGATCTaGGATCACCATTTCATATTT +
Preference number: 4 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQFSRVI*DHHFIF
Trigger: AAATATGAAATGGTGATCCCAGATCACCCTGCTAAA...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp TACACATTTCTATTCCTGATGCTACTGTGGATGTCAAGGTTTAGTTTAAGCCTTCAATTAGCAGTTAAATaGGTAGAGAGAGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: YTFLFLMLLWMSRFSLSLQLAVK*VERGCQ
Trigger: CTGACATCCTCTCTCTACCCATTTAACTGCTAATTG...AAGGCTTAAACTAAACCTTGACATCCACAGTAGCATCAGGAATAGAAATGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACGACTTAAACCATCAATaGTTCGGATCGCAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYDLNHQ*FGSQRN
Trigger: ATTTCTCTGCGATCCGAAGCATTGATGGTTTAAGTC...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR GCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATGACTTAAACCATCAATaGTTCGGATCGCAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: TLKSRCFLRITKPGKITYDLNHQ*FGSQRN
Trigger: ATTTCTCTGCGATCCGAAGCATTGATGGTTTAAGTC...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR GCA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATCTCGATGTATACAAATaGCACAGACAGTTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: KEILNILRNHRSYQTTWDLDVYK*HRQLFL
Trigger: TAAAAACAACTGTCTGTGGCATTTGTATACATCGAG...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp TACACATTTCTATTCCTGATGCTACTGTGGATGTCAAGGTTTAGTTTAAGCCTTACATTTGGCATTTCCTaGAGAAAAGAATCTGACTTC +
Preference number: 4 (lower is better)
Translates to: YTFLFLMLLWMSRFSLSLTFGIS*RKESDF
Trigger: GAAGTCAGATTCTTTTCTCCAGGAAATGCCAAATGT...AAGGCTTAAACTAAACCTTGACATCCACAGTAGCATCAGGAATAGAAATGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp TACACATTTCTATTCCTGATGCTACTGTGGATGTCAAGGTTTAGTTTAAGCCTTTTCCTGATGCTACTGTaGATGTCAAGGTTTAGTTTA +
Preference number: 4 (lower is better)
Translates to: YTFLFLMLLWMSRFSLSLFLMLL*MSRFSL
Trigger: TAAACTAAACCTTGACATCCACAGTAGCATCAGGAA...AAGGCTTAAACTAAACCTTGACATCCACAGTAGCATCAGGAATAGAAATGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATTTTCTCCCCTCTAGCTaGAAAGCATATTATGAGAGT +
Preference number: 4 (lower is better)
Translates to: TLKSRCFLRITKPGKITYFLPSS*KAYYES
Trigger: ACTCTCATAATATGCTTTCCAGCTAGAGGGGAGAAA...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATGCTTCAAAAATAAACTaGCAGCAGAGCACAATTGCA +
Preference number: 4 (lower is better)
Translates to: TLKSRCFLRITKPGKITYASKIN*QQSTIA
Trigger: TGCAATTGTGCTCTGCTGCCAGTTTATTTTTGAAGC...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATCCAAAGAGGAAAAGATaGTACCATCTTTCGAAGTTT +
Preference number: 4 (lower is better)
Translates to: TLKSRCFLRITKPGKITYPKRKR*YHLSKF
Trigger: AAACTTCGAAAGATGGTATCATCTTTTCCTCTTTGG...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR TCA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACCTTGCTTTACAAGGCTaGTCTATTAAACTTGTGACA +
Preference number: 4 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYLALQG*SIKLVT
Trigger: TGTCACAAGTTTAATAGATCAGCCTTGTAAAGCAAG...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR GCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATAAGCACTTAGAATTTTaGAATGCAGACTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: TLKSRCFLRITKPGKITYKHLEF*NADSVA
Trigger: AGCAACAGAGTCTGCATTGCAAAATTCTAAGTGCTT...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATAGAAATCACAATGCCTaGCTTGTAGTTTGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: TLKSRCFLRITKPGKITYRNHNA*LVVCCK
Trigger: CTTACAACAAACTACAAGGCAGGCATTGTGATTTCT...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATTTCTATCACTTTCTCTaGAATGGTCTTCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: TLKSRCFLRITKPGKITYFYHFL*NGLLMV
Trigger: TACCATGAGAAGACCATTCCAGAGAAAGTGATAGAA...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CCA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACTTCCTGATGCTACTGTaGATGTCAAGGTTTAGTTTA +
Preference number: 4 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYFLMLL*MSRFSL
Trigger: TAAACTAAACCTTGACATCCACAGTAGCATCAGGAA...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
3UTR CAA 72 bp ATTCTGATTCTTTTGAAGATTGAGGTCAGGATTCAGTaGACGCTAGAGATGAATACTGATTGGCTATTTATT +
Preference number: 4 (lower is better)
Translates to: ILILLKIEVRIQ*TLEMNTDWLFI
Trigger: AATAAATAGCCAATCAGTATTCATCTCTAGCGTCAACTGAATCCTGACCTCAATCTTCAAAAGAATCAGAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR GCA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACCATAACCTTACTTTCTaGCACTTGCAACAAAGAATA +
Preference number: 4 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYHNLTF*HLQQRI
Trigger: TATTCTTTGTTGCAAGTGGCAGAAAGTAAGGTTATG...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CCA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACCTTTCATTGTCAAACTaGTCCAGTAATTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYLSLSN*SSNSIF
Trigger: AAAGATGGAATTACTGGACCAGTTTGACAATGAAAG...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS CCA 90 bp GGCCTGTTGTGGATTTCTTGGTGGGATTATCAGGCACATTTTCCATaGGCACAGGCATGTGGGCATTGGTTTTCCAAATACCGGACACAT +
Preference number: 5 (lower is better)
Translates to: GLLWISWWDYQAHFP*AQACGHWFSKYRTH
Trigger: ATGTGTCCGGTATTTGGAAAACCAATGCCCACATGCCTGTGCCCATGGAAAATGTGCCTGATAATCCCACCAAGAAATCCACAACAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CCA 90 bp TTAGGTGTCCCTGCATTTGTCTTACTAGGCCTGTTGTGGATTTCTTaGTGGGATTATCAGGCACATTTTCCATGGGCACAGGCATGTGGG +
Preference number: 5 (lower is better)
Translates to: LGVPAFVLLGLLWIS*WDYQAHFPWAQACG
Trigger: CCCACATGCCTGTGCCCATGGAAAATGTGCCTGATAATCCCACCAAGAAATCCACAACAGGCCTAGTAAGACAAATGCAGGGACACCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CCA 90 bp TGCGAGGACTTAGGTGTCCCTGCATTTGTCTTACTAGGCCTGTTGTaGATTTCTTGGTGGGATTATCAGGCACATTTTCCATGGGCACAG +
Preference number: 5 (lower is better)
Translates to: CEDLGVPAFVLLGLL*ISWWDYQAHFPWAQ
Trigger: CTGTGCCCATGGAAAATGTGCCTGATAATCCCACCAAGAAATCCACAACAGGCCTAGTAAGACAAATGCAGGGACACCTAAGTCCTCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CCA 90 bp TCTCATAGGTTTTCAGCAGCTTTTCCACAACACCATAATTTGACCTaGGATCAGCTGACCTCGGACGGCCAGACAAATTACTCGGTCTCC +
Preference number: 5 (lower is better)
Translates to: SHRFSAAFPQHHNLT*DQLTSDGQTNYSVS
Trigger: GGAGACCGAGTAATTTGTCTGGCCGTCCGAGGTCAGCTGATCCCAGGTCAAATTATGGTGTTGTGGAAAAGCTGCTGAAAACCTATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS-3UTR CAA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTGGAAGTCAGGCAGGTTaGGCTTCAGTTGTACTACCT +
Preference number: 5 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGGSQAG*ASVVLP
Trigger: AGGTAGTACAACTGAAGCCAAACCTGCCTGACTTCC...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp CCACCGCGCCCACCAGTTCTAAGTTCCGATACATGTACTTGCTACTTAAGAAAAGCCATGCAGACCTCTTaGAATCTCAGGTTTCCCACC +
Preference number: 5 (lower is better)
Translates to: PPRPPVLSSDTCTCYLRKAMQTS*NLRFPT
Trigger: GGTGGGAAACCTGAGATTCAAAGAGGTCTGCATGGC...TTTTCTTAAGTAGCAAGTACATGTATCGGAACTTAGAACTGGTGGGCGCGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS TCA 90 bp CCACGAAGTAGAGGGGCTCCTTTTTGCACCTATCCCAATGTCACATaGCCACATGCTAAGTCCAACATCTTCATTACTTGGAGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: PRSRGAPFCTYPNVT*PHAKSNIFITWRLA
Trigger: AGCAAGCCTCCAAGTAATGAAGATGTTGGACTTAGCATGTGGTCATGTGACATTGGGATAGGTGCAAAAAGGAGCCCCTCTACTTCGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS GCA 90 bp AATTACTCGGTCTCCAGTCATGCTCGTGGAGCATATTTCGATAACTaGGAGGACTTAGGTGTCCCTGCATTTGTCTTACTAGGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: NYSVSSHARGAYFDN*EDLGVPAFVLLGLL
Trigger: CAACAGGCCTAGTAAGACAAATGCAGGGACACCTAAGTCCTCGCAGTTATCGAAATATGCTCCACGAGCATGACTGGAGACCGAGTAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS-3UTR CAA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCTTGCTCTGGAGCACATaGGTACAGCTCAGATTCTTC +
Preference number: 5 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSLLWST*VQLRFF
Trigger: GAAGAATCTGAGCTGTACCAATGTGCTCCAGAGCAA...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCGAGGTATCACAGGGCTaGAGATCCTCCGATGATTTT +
Preference number: 5 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSEVSQG*RSSDDF
Trigger: AAAATCATCGGAGGATCTCAAGCCCTGTGATACCTC...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CAA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTGTCTTACTAGGCCTGTaGTGGATTTCTTGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGVLLGL*WISWWD
Trigger: ATCCCACCAAGAAATCCACAACAGGCCTAGTAAGAC...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS CCA 90 bp TTCTTGGTGGGATTATCAGGCACATTTTCCATGGGCACAGGCATGTaGGCATTGGTTTTCCAAATACCGGACACATCGTTACTTTGTGAT +
Preference number: 5 (lower is better)
Translates to: FLVGLSGTFSMGTGM*ALVFQIPDTSLLCD
Trigger: ATCACAAAGTAACGATGTGTCCGGTATTTGGAAAACCAATGCCCACATGCCTGTGCCCATGGAAAATGTGCCTGATAATCCCACCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CCA 90 bp ATCCTATGGATGCTCGACCACTGGTCAATTAGCAGTGGAAGAAAGTaGATGGCTAGCTGTCTTAAAGAGAAAAGTCTCAGCTCGGTGAAT +
Preference number: 5 (lower is better)
Translates to: ILWMLDHWSISSGRK*MASCLKEKSLSSVN
Trigger: ATTCACCGAGCTGAGACTTTTCTCTTTAAGACAGCTAGCCATCCACTTTCTTCCACTGCTAATTGACCAGTGGTCGAGCATCCATAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483725.8
ENST00000487331.2
CDS-3UTR CAA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATGCGCCAGAACAGCTCTaGCTGTCTTCCTCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: KEILNILRNHRSYQTTWDAPEQL*LSSSEV
Trigger: GACTTCTGAGGAAGACAGCAAGAGCTGTTCTGGCGC...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCAAGAATGCACTGGTCATaGTTGATCATGGGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: YESRHHHATVLSLSRKSARMHWS*LIMGSP
Trigger: TGGGGACCCCATGATCAACAATGACCAGTGCATTCT...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATTTCGAGAGGTGCTTCTaGGAGGAGGAACTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: KEILNILRNHRSYQTTWDFERCF*EEELVE
Trigger: CTCCACCAGTTCCTCCTCCAAGAAGCACCTCTCGAA...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAATGGGGCACCCAGCTGTaGTGGTCTAACCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQWGTQL*WSNLSF
Trigger: GAAGGAAAGGTTAGACCACAACAGCTGGGTGCCCCA...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCGGCTTGCTATCTATTTaGACTTCTGGTACCAAAGAG +
Preference number: 5 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSGLLSI*TSGTKE
Trigger: CTCTTTGGTACCAGAAGTCAAAATAGATAGCAAGCC...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp CCACCGCGCCCACCAGTTCTAAGTTCCGATACATGTACTTGCTACTTAAGAAAAGCAATGCAGACTCTGTaGCTGTCTCATAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: PPRPPVLSSDTCTCYLRKAMQTL*LSHRFS
Trigger: TGAAAACCTATGAGACAGCAACAGAGTCTGCATTGC...TTTTCTTAAGTAGCAAGTACATGTATCGGAACTTAGAACTGGTGGGCGCGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTGAAGCACTTAGAATTTaGCAATGCAGACTCTGTTGC +
Preference number: 5 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGEALRI*QCRLCC
Trigger: GCAACAGAGTCTGCATTGCAAAATTCTAAGTGCTTC...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCATGGGCAGGCTCTCCATaGTCACACAACAGCATTTTC +
Preference number: 5 (lower is better)
Translates to: YESRHHHATVLSLSRKSAWAGSP*SHNSIF
Trigger: GAAAATGCTGTTGTGTGACAATGGAGAGCCTGCCCA...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CAA 90 bp AACACACACACACACACACACACACAAACTCAAGTACTCCTCTCTGCCTCATCCTTTGTCTTCTCTTCCTaGGGAAAAGAAGGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: NTHTHTHTQTQVLLSASSFVFSS*GKEGWK
Trigger: TTTCCAGCCTTCTTTTCCCAAGGAAGAGAAGACAAA...GGATGAGGCAGAGAGGAGTACTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp CCACCGCGCCCACCAGTTCTAAGTTCCGATACATGTACTTGCTACTTAAGAAAAGAGGTCAGGATTCAGTaGACGCTAGAGATGAATACT +
Preference number: 5 (lower is better)
Translates to: PPRPPVLSSDTCTCYLRKEVRIQ*TLEMNT
Trigger: AGTATTCATCTCTAGCGTCAACTGAATCCTGACCTC...TTTTCTTAAGTAGCAAGTACATGTATCGGAACTTAGAACTGGTGGGCGCGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp TACACATTTCTATTCCTGATGCTACTGTGGATGTCAAGGTTTAGTTTAAGCCTTGCTTGCAGCTTGATCTaGGACTTCCCAGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: YTFLFLMLLWMSRFSLSLACSLI*DFPASR
Trigger: TCTGGAGGCTGGGAAGTCCAAGATCAAGCTGCAAGC...AAGGCTTAAACTAAACCTTGACATCCACAGTAGCATCAGGAATAGAAATGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS TCA 90 bp TTCCAAATACCGGACACATCGTTACTTTGTGATATGCTACCTGTGTaGGTAGATGAGGTATCACAGGGCTTGAGATCCTCCGATGATTTT +
Preference number: 5 (lower is better)
Translates to: FQIPDTSLLCDMLPV*VDEVSQGLRSSDDF
Trigger: AAAATCATCGGAGGATCTCAAGCCCTGTGATACCTCATCTACTCACACAGGTAGCATATCACAAAGTAACGATGTGTCCGGTATTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS-3UTR CAA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATGGCCTCACATTCCTTTaGGTTGTCTGTAGCCAAAGG +
Preference number: 5 (lower is better)
Translates to: KEILNILRNHRSYQTTWDGLTFL*VVCSQR
Trigger: CCTTTGGCTACAGACAACCAAAAGGAATGTGAGGCC...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAACCATCTTTCATAGGCTaGTTCAGAATCCGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQPSFIG*FRIRAG
Trigger: CCCAGCTCGGATTCTGAACAAGCCTATGAAAGATGG...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp CCACAGATCATACCAGACTACTTGGGATACACTGGTGGAGAGGAACAGATAGGTTGTGATTTTGCTGTATaGCCTGACAATTTCTATCTG +
Preference number: 5 (lower is better)
Translates to: PQIIPDYLGYTGGEEQIGCDFAV*PDNFYL
Trigger: CAGATAGAAATTGTCAGGCAATACAGCAAAATCACA...ACCTATCTGTTCCTCTCCACCAGTGTATCCCAAGTAGTCTGGTATGATCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CAA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATCCACAACACCATAATTaGACCTGGGATCAGCTGACC +
Preference number: 5 (lower is better)
Translates to: KEILNILRNHRSYQTTWDPQHHN*TWDQLT
Trigger: GGTCAGCTGATCCCAGGTCAAATTATGGTGTTGTGG...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp CCACCGCGCCCACCAGTTCTAAGTTCCGATACATGTACTTGCTACTTAAGAAAAATAAGGAGATGGCTCTaGGAATACATTTGGCATAAG +
Preference number: 5 (lower is better)
Translates to: PPRPPVLSSDTCTCYLRKIRRWL*EYIWHK
Trigger: CTTATGCCAAATGTATTCCAAGAGCCATCTCCTTAT...TTTTCTTAAGTAGCAAGTACATGTATCGGAACTTAGAACTGGTGGGCGCGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp CCACCGCGCCCACCAGTTCTAAGTTCCGATACATGTACTTGCTACTTAAGAAAACAGGTTTGGCTTCAGTaGTACTACCTAGAGATATTT +
Preference number: 5 (lower is better)
Translates to: PPRPPVLSSDTCTCYLRKQVWLQ*YYLEIF
Trigger: AAATATCTCTAGGTAGTACAACTGAAGCCAAACCTG...TTTTCTTAAGTAGCAAGTACATGTATCGGAACTTAGAACTGGTGGGCGCGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp CCACCGCGCCCACCAGTTCTAAGTTCCGATACATGTACTTGCTACTTAAGAAAAAATCATTTTTGGTACTaGTCTGAAGAACTCATCCCC +
Preference number: 5 (lower is better)
Translates to: PPRPPVLSSDTCTCYLRKNHFWY*SEELIP
Trigger: GGGGATGAGTTCTTCAGACAAGTACCAAAAATGATT...TTTTCTTAAGTAGCAAGTACATGTATCGGAACTTAGAACTGGTGGGCGCGGTGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATTCTGTCCCTGCAATCTaGGCAGCCATGCAGACCTCT +
Preference number: 5 (lower is better)
Translates to: TLKSRCFLRITKPGKITYSVPAI*AAMQTS
Trigger: AGAGGTCTGCATGGCTGCCAAGATTGCAGGGACAGA...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS CCA 90 bp GTCATTACTTACATGAAGATCAGGATGAGATTTAGCAGGGTGATCTaGGATCACCATTTCATATTTTGGATTACTGGGGGTAGAGCAGGT +
Preference number: 5 (lower is better)
Translates to: VITYMKIRMRFSRVI*DHHFIFWITGGRAG
Trigger: ACCTGCTCTACCCCCAGTAATCCAAAATATGAAATGGTGATCCCAGATCACCCTGCTAAATCTCATCCTGATCTTCATGTAAGTAATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS-3UTR CAA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAAGAGGTATCACAGGGCTaGAGATCCTCCGATGATTTT +
Preference number: 5 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQEVSQG*RSSDDF
Trigger: AAAATCATCGGAGGATCTCAAGCCCTGTGATACCTC...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CAA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATCCTGTTGTGGATTTCTaGGTGGGATTATCAGGCACA +
Preference number: 5 (lower is better)
Translates to: KEILNILRNHRSYQTTWDPVVDF*VGLSGT
Trigger: TGTGCCTGATAATCCCACCAAGAAATCCACAACAGG...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS TCA 90 bp TCTGACTTCATCCTTCTATGGTTAGACCGCTTTCGAATTTCCTCTTaGAAGCTGCATAATTCTTCACTCACCTTCGCAAGTTCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: SDFILLWLDRFRISS*KLHNSSLTFASSSR
Trigger: TCTTGAAGAACTTGCGAAGGTGAGTGAAGAATTATGCAGCTTTCAAGAGGAAATTCGAAAGCGGTCTAACCATAGAAGGATGAAGTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368281.1
ENST00000483725.8
ENST00000487331.2
CDS GCA 90 bp TTTCATAGGCTTGTTCAGAATCCGAGCTGGGAAAATTTCGAGAGGTaGTTCTTGGAGGAGGAACTGGTGGAGTTTCATTTCTTTTTAAAT +
Preference number: 5 (lower is better)
Translates to: FHRLVQNPSWENFER*FLEEELVEFHFFLN
Trigger: ATTTAAAAAGAAATGAAACTCCACCAGTTCCTCCTCCAAGAAGCACCTCTCGAAATTTTCCCAGCTCGGATTCTGAACAAGCCTATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS-3UTR CAA 90 bp AAAGAGATCCTCAATATTCTAAGGAACCACAGATCATACCAGACTACTTGGGATTCACATTCCTTTTGGTaGTCTGTAGCCAAAGGATCC +
Preference number: 5 (lower is better)
Translates to: KEILNILRNHRSYQTTWDSHSFW*SVAKGS
Trigger: GGATCCTTTGGCTACAGACAACCAAAAGGAATGTGA...ATCCCAAGTAGTCTGGTATGATCTGTGGTTCCTTAGAATATTGAGGATCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAAGATCCTCCGATGATTTaGAGCAGCTGTGATTTTGCT +
Preference number: 5 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQDPPMI*SSCDFA
Trigger: AGCAAAATCACAGCTGCTCAAAATCATCGGAGGATC...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CAA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACACAGGCATGTGGGCATaGGTTTTCCAAATACCGGAC +
Preference number: 5 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYTGMWA*VFQIPD
Trigger: GTCCGGTATTTGGAAAACCAATGCCCACATGCCTGT...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACTTTCGGATCTATTCCTaGCTTCACTTCCTGTCCCCC +
Preference number: 5 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYFRIYS*LHFLSP
Trigger: GGGGGACAGGAAGTGAAGCAAGGAATAGATCCGAAA...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp TACTCCTCTCTGCCTCATCCTTATTCCTTTCTGAGATCAGCCCATAATATCAGTCCATTTAGGAAATGTTaGTTGCTGAGGCTGACAAAA +
Preference number: 5 (lower is better)
Translates to: YSSLPHPYSFLRSAHNISPFRKC*LLRLTK
Trigger: TTTTGTCAGCCTCAGCAACAAACATTTCCTAAATGG...ACTGATATTATGGGCTGATCTCAGAAAGGAATAAGGATGAGGCAGAGAGGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CAA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCAATAAGGAGATGGCTCTaGGAATACATTTGGCATAAG +
Preference number: 5 (lower is better)
Translates to: YESRHHHATVLSLSRKSAIRRWL*EYIWHK
Trigger: CTTATGCCAAATGTATTCCAAGAGCCATCTCCTTAT...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS TCA 90 bp TATGAGATCTTAGTTGAACCTGCACACACTCATTCAGTTCACTTCTaGATAGAGGAAAGAAATGGCTTTCTCTTTAGGCTTGGGTCATGT +
Preference number: 5 (lower is better)
Translates to: YEILVEPAHTHSVHF*IEERNGFLFRLGSC
Trigger: ACATGACCCAAGCCTAAAGAGAAAGCCATTTCTTTCCTCTATTCAGAAGTGAACTGAATGAGTGTGTGCAGGTTCAACTAAGATCTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368281.1
CDS-3UTR CAA 90 bp TACTCCTCTCTGCCTCATCCTTATTCCTTTCTGAGATCAGCCCATAATATCAGTCAACATCTTCATTACTaGGAGGCTTGCTATCTATTT +
Preference number: 5 (lower is better)
Translates to: YSSLPHPYSFLRSAHNISQHLHY*EACYLF
Trigger: AAATAGATAGCAAGCCTCCAAGTAATGAAGATGTTG...ACTGATATTATGGGCTGATCTCAGAAAGGAATAAGGATGAGGCAGAGAGGAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp TACTCCTCTCTGCCTCATCCTTATTCCTTTCTGAGATCAGCCCATAATATCAGTAAGTTAAGATTCAAATaGCTTGTCGGAAGAGAACAG +
Preference number: 5 (lower is better)
Translates to: YSSLPHPYSFLRSAHNISKLRFK*LVGREQ
Trigger: CTGTTCTCTTCCGACAAGCAATTTGAATCTTAACTT...ACTGATATTATGGGCTGATCTCAGAAAGGAATAAGGATGAGGCAGAGAGGAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CAA 90 bp TATGAATCTAGACATCACCATGCTACAGTCTTGAGCCTTTCAAGGAAGTCTGCATTGAAGTTGTTTTATTaGAAGCAGTCTCACTTGCCT +
Preference number: 5 (lower is better)
Translates to: YESRHHHATVLSLSRKSALKLFY*KQSHLP
Trigger: AGGCAAGTGAGACTGCTTCAAATAAAACAACTTCAA...TGCAGACTTCCTTGAAAGGCTCAAGACTGTAGCATGGTGATGTCTAGATTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS CCA 90 bp CAAAGAGGAAAAGATGATACCATCTTTCGAAGTTTTCCCTTCATTTaGATACAACATAGACATCTCTTGTTGTCTCAAAGGGAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: QRGKDDTIFRSFPFI*IQHRHLLLSQREVR
Trigger: CCTCACTTCCCTTTGAGACAACAAGAGATGTCTATGTTGTATCCAAATGAAGGGAAAACTTCGAAAGATGGTATCATCTTTTCCTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS-3UTR CAA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACGATCCTCCGATGATTTaGAGCAGCTGTGATTTTGCT +
Preference number: 5 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYDPPMI*SSCDFA
Trigger: AGCAAAATCACAGCTGCTCAAAATCATCGGAGGATC...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CAA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAACCATTTAGGAAATGTTaGTTGCTGAGGCTGACAAAA +
Preference number: 5 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQPFRKC*LLRLTK
Trigger: TTTTGTCAGCCTCAGCAACAAACATTTCCTAAATGG...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CAA 90 bp TTTTTCATTGTAGCTGGGGGCCAAGGAAGTGGTCAATTAATATTTGTACTGCAAACATCAGAATTACATTaGGTCCAATTATCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: FFIVAGGQGSGQLIFVLQTSELH*VQLSWK
Trigger: CTTCCAGGATAATTGGACCAAATGTAATTCTGATGT...TTGCAGTACAAATATTAATTGACCACTTCCTTGGCCCCCAGCTACAATGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp TACACATTTCTATTCCTGATGCTACTGTGGATGTCAAGGTTTAGTTTAAGCCTTCTGCATAATCTTCCATaGACTTTCCCATTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: YTFLFLMLLWMSRFSLSLLHNLP*TFPFLS
Trigger: AGAAAGGAATGGGAAAGTCAATGGAAGATTATGCAG...AAGGCTTAAACTAAACCTTGACATCCACAGTAGCATCAGGAATAGAAATGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACCTAAATCGGGGTAATTaGGGGAAGATTCTATCACTT +
Preference number: 5 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYLNRGN*GKILSL
Trigger: AAGTGATAGAATCTTCCCCAAATTACCCCGATTTAG...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACCTACCTAGAGATATTTaGGAAGAAGCTAGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYLPRDI*EEARVN
Trigger: GTTCACTCTAGCTTCTTCCAAAATATCTCTAGGTAG...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATCATCATATATGTGCATaGAACTGGTTTGTGCAGCAT +
Preference number: 5 (lower is better)
Translates to: TLKSRCFLRITKPGKITYHHICA*NWFVQH
Trigger: ATGCTGCACAAACCAGTTCAATGCACATATATGATG...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATTCATTACTTGGAGGCTaGCTATCTATTTTGACTTCT +
Preference number: 5 (lower is better)
Translates to: TLKSRCFLRITKPGKITYSLLGG*LSILTS
Trigger: AGAAGTCAAAATAGATAGCAAGCCTCCAAGTAATGA...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS-3UTR CAA 90 bp ACTCTTAAGTCCAGATGTTTTCTCAGGATAACTAAACCTGGTAAAATCACCTATTGTGATTTTGCTGTATaGCCTGACAATTTCTATCTG +
Preference number: 5 (lower is better)
Translates to: TLKSRCFLRITKPGKITYCDFAV*PDNFYL
Trigger: CAGATAGAAATTGTCAGGCAATACAGCAAAATCACA...ATAGGTGATTTTACCAGGTTTAGTTATCCTGAGAAAACATCTGGACTTAAGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465254.2
ENST00000483725.8
CDS-3UTR CAA 90 bp GTGAATTTCTCTAAATGGTTCAAATACATCATAAGGAGATGGCTCTTGGAATACCTTGGAAGCTTGAAGTaGTTTTATTTGAAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: VNFSKWFKYIIRRWLLEYLGSLK*FYLKQS
Trigger: AGACTGCTTCAAATAAAACAACTTCAAGCTTCCAAG...GTATTCCAAGAGCCATCTCCTTATGATGTATTTGAACCATTTAGAGAAATTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS CAA 72 bp TCTTCAAGAGCTGTACTGAGGGCGCCAGAACAGCTCTaGCTGTCTTCCTCAGAAGTCCTCAGGTCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: SSRAVLRAPEQL*LSSSEVLRSGQ
Trigger: CTGGCCTGACCTGAGGACTTCTGAGGAAGACAGCAAGAGCTGTTCTGGCGCCCTCAGTACAGCTCTTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368281.1
ENST00000483725.8
ENST00000487331.2
CDS CAA 90 bp TTCGCAAGTTCTTCAAGAGCTGTACTGAGGGCGCCAGAACAGCTCTaGCTGTCTTCCTCAGAAGTCCTCAGGTCAGGCCAGGCCTCACAT +
Preference number: 6 (lower is better)
Translates to: FASSSRAVLRAPEQL*LSSSEVLRSGQASH
Trigger: ATGTGAGGCCTGGCCTGACCTGAGGACTTCTGAGGAAGACAGCAAGAGCTGTTCTGGCGCCCTCAGTACAGCTCTTGAAGAACTTGCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368281.1
ENST00000483725.8
ENST00000487331.2
CDS CCA 72 bp GAAGTCCTCAGGTCAGGCCAGGCCTCACATTCCTTTTaGTTGTCTGTAGCCAAAGGATCCAAAAACCCTACT +
Preference number: 6 (lower is better)
Translates to: EVLRSGQASHSF*LSVAKGSKNPT
Trigger: AGTAGGGTTTTTGGATCCTTTGGCTACAGACAACCAAAAGGAATGTGAGGCCTGGCCTGACCTGAGGACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368281.1
ENST00000483725.8
ENST00000487331.2
CDS CAA 72 bp AGAAGTCCTCAGGTCAGGCCAGGCCTCACATTCCTTTaGGTTGTCTGTAGCCAAAGGATCCAAAAACCCTAC +
Preference number: 6 (lower is better)
Translates to: RSPQVRPGLTFL*VVCSQRIQKPY
Trigger: GTAGGGTTTTTGGATCCTTTGGCTACAGACAACCAAAAGGAATGTGAGGCCTGGCCTGACCTGAGGACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368281.1
ENST00000483725.8
ENST00000487331.2
CDS CAA 72 bp CATAGGTTTTCAGCAGCTTTTCCACAACACCATAATTaGACCTGGGATCAGCTGACCTCGGACGGCCAGACA +
Preference number: 6 (lower is better)
Translates to: HRFSAAFPQHHN*TWDQLTSDGQT
Trigger: TGTCTGGCCGTCCGAGGTCAGCTGATCCCAGGTCAAATTATGGTGTTGTGGAAAAGCTGCTGAAAACCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CAA 90 bp CTTAGGTGTCCCTGCATTTGTCTTACTAGGCCTGTTGTGGATTTCTaGGTGGGATTATCAGGCACATTTTCCATGGGCACAGGCATGTGG +
Preference number: 6 (lower is better)
Translates to: LRCPCICLTRPVVDF*VGLSGTFSMGTGMW
Trigger: CCACATGCCTGTGCCCATGGAAAATGTGCCTGATAATCCCACCAAGAAATCCACAACAGGCCTAGTAAGACAAATGCAGGGACACCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS TCA 72 bp CCGGACACATCGTTACTTTGTGATATGCTACCTGTGTaGGTAGATGAGGTATCACAGGGCTTGAGATCCTCC +
Preference number: 6 (lower is better)
Translates to: PDTSLLCDMLPV*VDEVSQGLRSS
Trigger: GGAGGATCTCAAGCCCTGTGATACCTCATCTACTCACACAGGTAGCATATCACAAAGTAACGATGTGTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CAA 72 bp GTCCTCAGGTCAGGCCAGGCCTCACATTCCTTTTGGTaGTCTGTAGCCAAAGGATCCAAAAACCCTACTTTT +
Preference number: 6 (lower is better)
Translates to: VLRSGQASHSFW*SVAKGSKNPTF
Trigger: AAAAGTAGGGTTTTTGGATCCTTTGGCTACAGACAACCAAAAGGAATGTGAGGCCTGGCCTGACCTGAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368281.1
ENST00000483725.8
ENST00000487331.2
CDS CAA 90 bp TTGCTGTCTCATAGGTTTTCAGCAGCTTTTCCACAACACCATAATTaGACCTGGGATCAGCTGACCTCGGACGGCCAGACAAATTACTCG +
Preference number: 6 (lower is better)
Translates to: LLSHRFSAAFPQHHN*TWDQLTSDGQTNYS
Trigger: CGAGTAATTTGTCTGGCCGTCCGAGGTCAGCTGATCCCAGGTCAAATTATGGTGTTGTGGAAAAGCTGCTGAAAACCTATGAGACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS GCA 72 bp GTCTCCAGTCATGCTCGTGGAGCATATTTCGATAACTaGGAGGACTTAGGTGTCCCTGCATTTGTCTTACTA +
Preference number: 6 (lower is better)
Translates to: VSSHARGAYFDN*EDLGVPAFVLL
Trigger: TAGTAAGACAAATGCAGGGACACCTAAGTCCTCGCAGTTATCGAAATATGCTCCACGAGCATGACTGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CCA 72 bp CCTTCCATCTTTCATAGGCTTGTTCAGAATCCGAGCTaGGAAAATTTCGAGAGGTGCTTCTTGGAGGAGGAA +
Preference number: 6 (lower is better)
Translates to: PSIFHRLVQNPS*ENFERCFLEEE
Trigger: TTCCTCCTCCAAGAAGCACCTCTCGAAATTTTCCCAGCTCGGATTCTGAACAAGCCTATGAAAGATGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CCA 72 bp TTTTCAGCAGCTTTTCCACAACACCATAATTTGACCTaGGATCAGCTGACCTCGGACGGCCAGACAAATTAC +
Preference number: 6 (lower is better)
Translates to: FSAAFPQHHNLT*DQLTSDGQTNY
Trigger: GTAATTTGTCTGGCCGTCCGAGGTCAGCTGATCCCAGGTCAAATTATGGTGTTGTGGAAAAGCTGCTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CAA 72 bp CCCTGCATTTGTCTTACTAGGCCTGTTGTGGATTTCTaGGTGGGATTATCAGGCACATTTTCCATGGGCACA +
Preference number: 6 (lower is better)
Translates to: PCICLTRPVVDF*VGLSGTFSMGT
Trigger: TGTGCCCATGGAAAATGTGCCTGATAATCCCACCAAGAAATCCACAACAGGCCTAGTAAGACAAATGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS TCA 72 bp AGAGGGGCTCCTTTTTGCACCTATCCCAATGTCACATaGCCACATGCTAAGTCCAACATCTTCATTACTTGG +
Preference number: 6 (lower is better)
Translates to: RGAPFCTYPNVT*PHAKSNIFITW
Trigger: CCAAGTAATGAAGATGTTGGACTTAGCATGTGGTCATGTGACATTGGGATAGGTGCAAAAAGGAGCCCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CCA 72 bp TGGATTTCTTGGTGGGATTATCAGGCACATTTTCCATaGGCACAGGCATGTGGGCATTGGTTTTCCAAATAC +
Preference number: 6 (lower is better)
Translates to: WISWWDYQAHFP*AQACGHWFSKY
Trigger: GTATTTGGAAAACCAATGCCCACATGCCTGTGCCCATGGAAAATGTGCCTGATAATCCCACCAAGAAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CCA 72 bp TTAGGTGTCCCTGCATTTGTCTTACTAGGCCTGTTGTaGATTTCTTGGTGGGATTATCAGGCACATTTTCCA +
Preference number: 6 (lower is better)
Translates to: LGVPAFVLLGLL*ISWWDYQAHFP
Trigger: TGGAAAATGTGCCTGATAATCCCACCAAGAAATCCACAACAGGCCTAGTAAGACAAATGCAGGGACACCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CAA 72 bp CAGAATCCGAGCTGGGAAAATTTCGAGAGGTGCTTCTaGGAGGAGGAACTGGTGGAGTTTCATTTCTTTTTA +
Preference number: 6 (lower is better)
Translates to: QNPSWENFERCF*EEELVEFHFFL
Trigger: TAAAAAGAAATGAAACTCCACCAGTTCCTCCTCCAAGAAGCACCTCTCGAAATTTTCCCAGCTCGGATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CAA 90 bp AGGCTTGTTCAGAATCCGAGCTGGGAAAATTTCGAGAGGTGCTTCTaGGAGGAGGAACTGGTGGAGTTTCATTTCTTTTTAAATCGATTG +
Preference number: 6 (lower is better)
Translates to: RLVQNPSWENFERCF*EEELVEFHFFLNRL
Trigger: CAATCGATTTAAAAAGAAATGAAACTCCACCAGTTCCTCCTCCAAGAAGCACCTCTCGAAATTTTCCCAGCTCGGATTCTGAACAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CAA 72 bp TCCAAAGCTTTACTTCCCGGCAAAGCGATAACTCAGTaGAGAGAAGCACTAGAGTTGATGCCTCTTCTATTT +
Preference number: 6 (lower is better)
Translates to: SKALLPGKAITQ*REALELMPLLF
Trigger: AAATAGAAGAGGCATCAACTCTAGTGCTTCTCTCAACTGAGTTATCGCTTTGCCGGGAAGTAAAGCTTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487331.2
CDS CCA 72 bp TACATGAAGATCAGGATGAGATTTAGCAGGGTGATCTaGGATCACCATTTCATATTTTGGATTACTGGGGGT +
Preference number: 6 (lower is better)
Translates to: YMKIRMRFSRVI*DHHFIFWITGG
Trigger: ACCCCCAGTAATCCAAAATATGAAATGGTGATCCCAGATCACCCTGCTAAATCTCATCCTGATCTTCATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS TCA 72 bp GCATTTCTAAATGCTGACTTAATGTGGCACCACCACTaGCATCAGAATTACATTTGGTCCAATTATCCTGGA +
Preference number: 6 (lower is better)
Translates to: AFLNADLMWHHH*HQNYIWSNYPG
Trigger: TCCAGGATAATTGGACCAAATGTAATTCTGATGTCAGTGGTGGTGCCACATTAAGTCAGCATTTAGAAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS TCA 72 bp ATGCAAAATAAGTCCAACCATTCCACAGAGCAGTACTaGCAAGTCCCTTTGAAACCTTCACCACTTTTACAA +
Preference number: 6 (lower is better)
Translates to: MQNKSNHSTEQY*QVPLKPSPLLQ
Trigger: TTGTAAAAGTGGTGAAGGTTTCAAAGGGACTTGTCAGTACTGCTCTGTGGAATGGTTGGACTTATTTTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483725.8
CDS CAA 72 bp CACATGCTAAGTCCAACATCTTCATTACTTGGAGGCTaGCTATCTATTTTGACTTCTGGTACCAAAGAGGAA +
Preference number: 6 (lower is better)
Translates to: HMLSPTSSLLGG*LSILTSGTKEE
Trigger: TTCCTCTTTGGTACCAGAAGTCAAAATAGATAGCAAGCCTCCAAGTAATGAAGATGTTGGACTTAGCATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CAA 72 bp CTTAATGTGGCACCACCACTGACATCAGAATTACATTaGGTCCAATTATCCTGGAAGCACTTAGAATTTTGC +
Preference number: 6 (lower is better)
Translates to: LNVAPPLTSELH*VQLSWKHLEFC
Trigger: GCAAAATTCTAAGTGCTTCCAGGATAATTGGACCAAATGTAATTCTGATGTCAGTGGTGGTGCCACATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CAA 90 bp ATCAGAATTACATTTGGTCCAATTATCCTGGAAGCACTTAGAATTTaGCAATGCAGACTCTGTTGCTGTCTCATAGGTTTTCAGCAGCTT +
Preference number: 6 (lower is better)
Translates to: IRITFGPIILEALRI*QCRLCCCLIGFQQL
Trigger: AAGCTGCTGAAAACCTATGAGACAGCAACAGAGTCTGCATTGCAAAATTCTAAGTGCTTCCAGGATAATTGGACCAAATGTAATTCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS TCA 72 bp TTAGTTGAACCTGCACACACTCATTCAGTTCACTTCTaGATAGAGGAAAGAAATGGCTTTCTCTTTAGGCTT +
Preference number: 6 (lower is better)
Translates to: LVEPAHTHSVHF*IEERNGFLFRL
Trigger: AAGCCTAAAGAGAAAGCCATTTCTTTCCTCTATTCAGAAGTGAACTGAATGAGTGTGTGCAGGTTCAACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368281.1
CDS CCA 72 bp ATCGGGGTAATTTGGGGAAGATTCTATCACTTTCTCTaGAATGGTCTTCTCATGGTAAAGATCAATGATCTT +
Preference number: 6 (lower is better)
Translates to: IGVIWGRFYHFL*NGLLMVKINDL
Trigger: AAGATCATTGATCTTTACCATGAGAAGACCATTCCAGAGAAAGTGATAGAATCTTCCCCAAATTACCCCGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368281.1
ENST00000472335.2
ENST00000483725.8
ENST00000487331.2
CDS CAA 72 bp ACATTTGGTCCAATTATCCTGGAAGCACTTAGAATTTaGCAATGCAGACTCTGTTGCTGTCTCATAGGTTTT +
Preference number: 6 (lower is better)
Translates to: TFGPIILEALRI*QCRLCCCLIGF
Trigger: AAAACCTATGAGACAGCAACAGAGTCTGCATTGCAAAATTCTAAGTGCTTCCAGGATAATTGGACCAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CAA 90 bp ATCTTTCGAAGTTTTCCCTTCATTTGGATACAACATAGACATCTCTaGTTGTCTCAAAGGGAAGTGAGGGTTGTAATTCCTTTTACTTCG +
Preference number: 6 (lower is better)
Translates to: IFRSFPFIWIQHRHL*LSQREVRVVIPFTS
Trigger: CGAAGTAAAAGGAATTACAACCCTCACTTCCCTTTGAGACAACAAGAGATGTCTATGTTGTATCCAAATGAAGGGAAAACTTCGAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368281.1
ENST00000483725.8
CDS CCA 72 bp CTAAACAGTCACTTGTCAGTCAAAAGATGTTTCCTTTaGTTGGTCAATTACATTGTGAGGGCTAGATATTAC +
Preference number: 6 (lower is better)
Translates to: LNSHLSVKRCFL*LVNYIVRARYY
Trigger: GTAATATCTAGCCCTCACAATGTAATTGACCAACCAAAGGAAACATCTTTTGACTGACAAGTGACTGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368281.1
CDS CAA 90 bp ATCTCAGATAGTAAGTCAACTTATTCTTGTTCCCTAAACAGTCACTaGTCAGTCAAAAGATGTTTCCTTTGGTTGGTCAATTACATTGTG +
Preference number: 6 (lower is better)
Translates to: ISDSKSTYSCSLNSH*SVKRCFLWLVNYIV
Trigger: CACAATGTAATTGACCAACCAAAGGAAACATCTTTTGACTGACAAGTGACTGTTTAGGGAACAAGAATAAGTTGACTTACTATCTGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368281.1
CDS TCA 72 bp GTAAAAGCTTGTCAAACTTCAAAAGAGACTGTCAGATaGCTATCAAAGCAAATGACTCTATGTTTAACAGCC +
Preference number: 6 (lower is better)
Translates to: VKACQTSKETVR*LSKQMTLCLTA
Trigger: GGCTGTTAAACATAGAGTCATTTGCTTTGATAGTCATCTGACAGTCTCTTTTGAAGTTTGACAAGCTTTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368281.1
CDS CAA 72 bp AGTAAGTCAACTTATTCTTGTTCCCTAAACAGTCACTaGTCAGTCAAAAGATGTTTCCTTTGGTTGGTCAAT +
Preference number: 6 (lower is better)
Translates to: SKSTYSCSLNSH*SVKRCFLWLVN
Trigger: ATTGACCAACCAAAGGAAACATCTTTTGACTGACAAGTGACTGTTTAGGGAACAAGAATAAGTTGACTTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368281.1