RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIAA0319 (Homo sapiens)

Ensembl gene IDs: ENSG00000137261

Ensembl transcript IDs: ENST00000378214.8, ENST00000430948.6, ENST00000535378.5, ENST00000537886.5, ENST00000616673.4

Found 1134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAATGCCAAGGGCACCACCAAGGCCACCAGCCTCAGGACCAAGGGTaGATGGGGAACTACCCTGAACCAGTCAACGTAGCAGGCTACAAT +
Preference number: 1 (lower is better)
Translates to: KCQGHHQGHQPQDQG*MGNYPEPVNVAGYN
Trigger: ATTGTAGCCTGCTACGTTGACTGGTTCAGGGTAGTTCCCCATCCACCCTTGGTCCTGAGGCTGGTGGCCTTGGTGGTGCCCTTGGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR GCA 90 bp TTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATaGAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGACAA +
Preference number: 1 (lower is better)
Translates to: LALCECCRQHRKLAT*KTPYLHRWPVPLRQ
Trigger: TTGTCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR TCA 90 bp CCAAGGCCACCAGCCTCAGGACCAAGGGTGGATGGGGAACTACCCTaGACCAGTCAACGTAGCAGGCTACAATTAACTCCAGTTAATTGC +
Preference number: 1 (lower is better)
Translates to: PRPPASGPRVDGELP*TSQRSRLQLTPVNC
Trigger: GCAATTAACTGGAGTTAATTGTAGCCTGCTACGTTGACTGGTTCAGGGTAGTTCCCCATCCACCCTTGGTCCTGAGGCTGGTGGCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR CCA 90 bp CAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATaGCCCGTGCCTCTTAGACAAGCTATTTTAACATACACAGCCATC +
Preference number: 1 (lower is better)
Translates to: QHRKLATCKTPYLHR*PVPLRQAILTYTAI
Trigger: GATGGCTGTGTATGTTAAAATAGCTTGTCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR TCA 90 bp TGGCCCGTGCCTCTTAGACAAGCTATTTTAACATACACAGCCATCTaGCTGCAGGTCCTACAAGAGAAACCGTGTTTAGAATGCTGTTCC +
Preference number: 1 (lower is better)
Translates to: WPVPLRQAILTYTAI*LQVLQEKPCLECCS
Trigger: GGAACAGCATTCTAAACACGGTTTCTCTTGTAGGACCTGCAGTCAGATGGCTGTGTATGTTAAAATAGCTTGTCTAAGAGGCACGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR GCA 90 bp TCACTCCCTTCTTCCTCATTACGCCCGATGACTTTACATTTGGGCTaGTGTCCCCTATGCCAGAAATTCACATTTGCATGCAAACAACCA +
Preference number: 1 (lower is better)
Translates to: SLPSSSLRPMTLHLG*CPLCQKFTFACKQP
Trigger: TGGTTGTTTGCATGCAAATGTGAATTTCTGGCATAGGGGACAGCAGCCCAAATGTAAAGTCATCGGGCGTAATGAGGAAGAAGGGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR TCA 90 bp CATAAAGCGGTAAATGTTCACTCCCTTCTTCCTCATTACGCCCGATaGCTTTACATTTGGGCTGCTGTCCCCTATGCCAGAAATTCACAT +
Preference number: 1 (lower is better)
Translates to: HKAVNVHSLLPHYAR*LYIWAAVPYARNSH
Trigger: ATGTGAATTTCTGGCATAGGGGACAGCAGCCCAAATGTAAAGTCATCGGGCGTAATGAGGAAGAAGGGAGTGAACATTTACCGCTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR TCA 90 bp GCGTGCTTTATCTCCCAAAGATCCTCAATGATAAGCAGTCCACCATaGAGAATGCTGGTTGGTCATTCCATCTCGTGCTTTGTTCTGATG +
Preference number: 1 (lower is better)
Translates to: ACFISQRSSMISSPP*RMLVGHSISCFVLM
Trigger: CATCAGAACAAAGCACGAGATGGAATGACCAACCAGCATTCTTCATGGTGGACTGCTTATCATTGAGGATCTTTGGGAGATAAAGCACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR CCA 90 bp CCATTAAAAGAAATTCCTCTTAGTCCTGGGAATAGAACTTTCAGGTaGCCCAAAAGTTCCACCAGAATTTGCCCTCCATCCATCAAGGCA +
Preference number: 1 (lower is better)
Translates to: PLKEIPLSPGNRTFR*PKSSTRICPPSIKA
Trigger: TGCCTTGATGGATGGAGGGCAAATTCTGGTGGAACTTTTGGGCCACCTGAAAGTTCTATTCCCAGGACTAAGAGGAATTTCTTTTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR GCA 90 bp ATGGGTATGAATCCTCCTTCATTGAATGTAAACCAGCAACTAAAGTaGTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCT +
Preference number: 1 (lower is better)
Translates to: MGMNPPSLNVNQQLK*LLACEPYKHPLPYS
Trigger: AGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCACTTTAGTTGCTGGTTTACATTCAATGAAGGAGGATTCATACCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR GCA 90 bp TTTCTTAGAGAAAGAAAAGATAATGTTACAATGCTACCTTCAACCTaGACGGCATTAAGCTCCTCCTCCCCTTTCTATTGCCTCAGTCCT +
Preference number: 1 (lower is better)
Translates to: FLRERKDNVTMLPST*TALSSSSPFYCLSP
Trigger: AGGACTGAGGCAATAGAAAGGGGAGGAGGAGCTTAATGCCGTGCAGGTTGAAGGTAGCATTGTAACATTATCTTTTCTTTCTCTAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR CCA 90 bp CATAACCACGCCATCCAAGTTAAGACTGACTGTATTTCAGAGTTTTaGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCA +
Preference number: 1 (lower is better)
Translates to: HNHAIQVKTDCISEF*NIYTIAESLSLSMA
Trigger: TGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCCAAAACTCTGAAATACAGTCAGTCTTAACTTGGATGGCGTGGTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGAGGGCTTGGCACTGTaGGAGTGTTGCCGTCAGCAC +
Preference number: 2 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLEGLAL*ECCRQH
Trigger: GTGCTGACGGCAACACTCGCACAGTGCCAAGCCCTC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR CAA 90 bp AGGAGGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTaGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTC +
Preference number: 2 (lower is better)
Translates to: RRAWHCASVAVSTES*LHARLRTSTDGPCL
Trigger: GAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGGGGTGGCCCGGGTGTaGTCCACAGGAGACTATGCA +
Preference number: 2 (lower is better)
Translates to: RSFCDGRIREARLRWPRTGVARV*STGDYA
Trigger: TGCATAGTCTCCTGTGGATCACACCCGGGCCACCCC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCCTCAGGACCAAGGGTaGATGGGGAACTACCCTGAA +
Preference number: 2 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLPQDQG*MGNYPE
Trigger: TTCAGGGTAGTTCCCCATCCACCCTTGGTCCTGAGG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGCACTGTGCGAGTGTTaGCGTCAGCACAGAAAGCTT +
Preference number: 2 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLALCEC*RQHRKL
Trigger: AAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGAGGGCTTGGCACTGTaGGAGTGTTGCCGTCAGCAC +
Preference number: 2 (lower is better)
Translates to: RSFCDGRIREARLRWPRTEGLAL*ECCRQH
Trigger: GTGCTGACGGCAACACTCGCACAGTGCCAAGCCCTC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCCCACTGACTGGTCTTaGATTCAAGGGGTCCTTCCA +
Preference number: 2 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLPTDWS*IQGVLP
Trigger: TGGAAGGACCCCTTGAATCCAAGACCAGTCAGTGGG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGGGAAACATTTTCTCTaGCACTCCTGCCCTGGTGTT +
Preference number: 2 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLGKHFL*HSCPGV
Trigger: AACACCAGGGCAGGAGTGCCAGAGAAAATGTTTCCC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGATGGGGAACTACCCTaGACCAGTCAACGTAGCAGG +
Preference number: 2 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFDGELP*TSQRSR
Trigger: CCTGCTACGTTGACTGGTTCAGGGTAGTTCCCCATC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCCGTACCTCCACAGATaGCCCGTGCCTCTTAGACAA +
Preference number: 2 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFPYLHR*PVPLRQ
Trigger: TTGTCTAAGAGGCACGGGCCATCTGTGGAGGTACGG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAGGTGTGCTCACACTTaGTACCACAACACTGGTTCT +
Preference number: 2 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLRCAHT*YHNTGS
Trigger: AGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGAATACTGCGGGAGATaGCAAAAGCACCTAAAAGCT +
Preference number: 2 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLEYCGR*QKHLKA
Trigger: AGCTTTTAGGTGCTTTTGTCATCTCCCGCAGTATTC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGCACTGTGCGAGTGTTaGCGTCAGCACAGAAAGCTT +
Preference number: 2 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFALCEC*RQHRKL
Trigger: AAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAATCCACAGGAGACTATaGAGGCCATCTCTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: RSFCDGRIREARLRWPRTIHRRL*RPSLPL
Trigger: CAGAGGGAGAGATGGCCTGCATAGTCTCCTGTGGAT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACCCACTGACTGGTCTTaGATTCAAGGGGTCCTTCCA +
Preference number: 2 (lower is better)
Translates to: RSFCDGRIREARLRWPRTPTDWS*IQGVLP
Trigger: TGGAAGGACCCCTTGAATCCAAGACCAGTCAGTGGG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGCCCACTGACTGGTCTTaGATTCAAGGGGTCCTTCCA +
Preference number: 2 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQPTDWS*IQGVLP
Trigger: TGGAAGGACCCCTTGAATCCAAGACCAGTCAGTGGG...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGTAACTCCCACTGACTaGTCTTGGATTCAAGGGGTC +
Preference number: 2 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQVTPTD*SWIQGV
Trigger: GACCCCTTGAATCCAAGACCAGTCAGTGGGAGTTAC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGACACATCTAACCCACTaGGGAAGAAGGTCAATGAAC +
Preference number: 2 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLTHLTH*GRRSMN
Trigger: GTTCATTGACCTTCTTCCCCAGTGGGTTAGATGTGT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCCTCAGGACCAAGGGTaGATGGGGAACTACCCTGAA +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACPQDQG*MGNYPE
Trigger: TTCAGGGTAGTTCCCCATCCACCCTTGGTCCTGAGG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGTTTGCATTCAGTTCTTaGAGCCACTACTTCTTGGCC +
Preference number: 2 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLFAFSS*SHYFLA
Trigger: GGCCAAGAAGTAGTGGCTCCAAGAACTGAATGCAAA...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGTGTTCTGATGAGAAATaGGGTGACAAGACAGGACTC +
Preference number: 2 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLCSDEK*GDKTGL
Trigger: GAGTCCTGTCTTGTCACCCCATTTCTCATCAGAACA...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATCCACAGATGGCCCGTaGCTCTTAGACAAGCTATTT +
Preference number: 2 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQSTDGP*LLDKLF
Trigger: AAATAGCTTGTCTAAGAGGCACGGGCCATCTGTGGA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTATCCACAGGAGACTATaGAGGCCATCTCTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACIHRRL*RPSLPL
Trigger: CAGAGGGAGAGATGGCCTGCATAGTCTCCTGTGGAT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAAAAGGTGGCATCACTaGCTTGTTGAGTGGTACATT +
Preference number: 2 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLKRWHH*LVEWYI
Trigger: AATGTACCACTCAACAAGCCAGTGATGCCACCTTTT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCCTCATTACGCCCGATaGCTTTACATTTGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACPHYAR*LYIWAA
Trigger: AGCAGCCCAAATGTAAAGTCATCGGGCGTAATGAGG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTACACAGCCATCTGACTaGAGGTCCTACAAGAGAAAC +
Preference number: 2 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFTQPSD*RSYKRN
Trigger: GTTTCTCTTGTAGGACCTGCAGTCAGATGGCTGTGT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAACACAGCCATCTGACTaGAGGTCCTACAAGAGAAAC +
Preference number: 2 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRTQPSD*RSYKRN
Trigger: GTTTCTCTTGTAGGACCTGCAGTCAGATGGCTGTGT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCTTCTTCATCAGCAATaGATTCCTAGTTTTCCCATG +
Preference number: 2 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLLLHQQ*IPSFPM
Trigger: CATGGGAAAACTAGGAATGCATTGCTGATGAAGAAG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGGCTGCTGTCCCCTATaGCAGAAATTCACATTTGCA +
Preference number: 2 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFGCCPL*QKFTFA
Trigger: TGCAAATGTGAATTTCTGGCATAGGGGACAGCAGCC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGGCTGCTGTCCCCTATaGCAGAAATTCACATTTGCA +
Preference number: 2 (lower is better)
Translates to: RSFCDGRIREARLRWPRTGCCPL*QKFTFA
Trigger: TGCAAATGTGAATTTCTGGCATAGGGGACAGCAGCC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGACACATCTAACCCACTaGGGAAGAAGGTCAATGAAC +
Preference number: 2 (lower is better)
Translates to: VSTESLLHARLRTSTDGPTHLTH*GRRSMN
Trigger: GTTCATTGACCTTCTTCCCCAGTGGGTTAGATGTGT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCGGTCTTTTAGTACGTaGGGATACACATCTAACCCA +
Preference number: 2 (lower is better)
Translates to: VSTESLLHARLRTSTDGPRSFST*GYTSNP
Trigger: TGGGTTAGATGTGTATCCCCACGTACTAAAAGACCG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGTATGTCAAGTTATTTTaGAAAGTACCTGTCGGGGAC +
Preference number: 2 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLYVKLF*KVPVGD
Trigger: GTCCCCGACAGGTACTTTCCAAAATAACTTGACATA...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAAGGTGTGCTCACACTTaGTACCACAACACTGGTTCT +
Preference number: 2 (lower is better)
Translates to: RSFCDGRIREARLRWPRTRCAHT*YHNTGS
Trigger: AGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTACACAGCCATCTGACTaGAGGTCCTACAAGAGAAAC +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACTQPSD*RSYKRN
Trigger: GTTTCTCTTGTAGGACCTGCAGTCAGATGGCTGTGT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAGAAAGCTTGCTACATaGAAGACTCCGTACCTCCAC +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACRKLAT*KTPYLH
Trigger: GTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTTCAGCACAGAAAGCTTaGTACATGCAAGACTCCGTA +
Preference number: 2 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFSAQKA*YMQDSV
Trigger: TACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGA...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGGCTGCTGTCCCCTATaGCAGAAATTCACATTTGCA +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACGCCPL*QKFTFA
Trigger: TGCAAATGTGAATTTCTGGCATAGGGGACAGCAGCC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAGTTCCACCAGAATTTaGCCTCCATCCATCAAGGCA +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACSSTRI*PPSIKA
Trigger: TGCCTTGATGGATGGAGGGCAAATTCTGGTGGAACT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGTCCACCATGAAGAATaGTGGTTGGTCATTCCATCT +
Preference number: 2 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFVHHEE*WLVIPS
Trigger: AGATGGAATGACCAACCAGCATTCTTCATGGTGGAC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCCAGAGCTCTTAGCGTaGTTTATCTCCCAAAGATCC +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACPELLA*FISQRS
Trigger: GGATCTTTGGGAGATAAAGCACGCTAAGAGCTCTGG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTACACATCTAACCCACTaGGGAAGAAGGTCAATGAAC +
Preference number: 2 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFTHLTH*GRRSMN
Trigger: GTTCATTGACCTTCTTCCCCAGTGGGTTAGATGTGT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACGGTCTTTTAGTACGTaGGGATACACATCTAACCCA +
Preference number: 2 (lower is better)
Translates to: RSFCDGRIREARLRWPRTRSFST*GYTSNP
Trigger: TGGGTTAGATGTGTATCCCCACGTACTAAAAGACCG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATCCTTAGCTCTTGAATaGCCAACAGCTGCTTTCTTG +
Preference number: 2 (lower is better)
Translates to: RSFCDGRIREARLRWPRTSLALE*PTAAFL
Trigger: CAAGAAAGCAGCTGTTGGCCATTCAAGAGCTAAGGA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAGGGGAAGAAGGTCAATaGACTATTCTAAAAGAGTGG +
Preference number: 2 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRGEEGQ*TILKEW
Trigger: CCACTCTTTTAGAATAGTTCATTGACCTTCTTCCCC...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGGGGAAGAAGGTCAATaGACTATTCTAAAAGAGTGG +
Preference number: 2 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQGEEGQ*TILKEW
Trigger: CCACTCTTTTAGAATAGTTCATTGACCTTCTTCCCC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTACTTTACATTTGGGCTaGTGTCCCCTATGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACTLHLG*CPLCQK
Trigger: TTTCTGGCATAGGGGACAGCAGCCCAAATGTAAAGT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGTCCACCATGAAGAATaGTGGTTGGTCATTCCATCT +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACVHHEE*WLVIPS
Trigger: AGATGGAATGACCAACCAGCATTCTTCATGGTGGAC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTACACATCTAACCCACTaGGGAAGAAGGTCAATGAAC +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACTHLTH*GRRSMN
Trigger: GTTCATTGACCTTCTTCCCCAGTGGGTTAGATGTGT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCGGTCTTTTAGTACGTaGGGATACACATCTAACCCA +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACRSFST*GYTSNP
Trigger: TGGGTTAGATGTGTATCCCCACGTACTAAAAGACCG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTTCCTTAGCTCTTGAATaGCCAACAGCTGCTTTCTTG +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACSLALE*PTAAFL
Trigger: CAAGAAAGCAGCTGTTGGCCATTCAAGAGCTAAGGA...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTTTTGCATTCAGTTCTTaGAGCCACTACTTCTTGGCC +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACFAFSS*SHYFLA
Trigger: GGCCAAGAAGTAGTGGCTCCAAGAACTGAATGCAAA...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAAATAGAACTTTCAGGTaGCCCAAAAGTTCCACCAGA +
Preference number: 2 (lower is better)
Translates to: RSFCDGRIREARLRWPRTNRTFR*PKSSTR
Trigger: TCTGGTGGAACTTTTGGGCCACCTGAAAGTTCTATT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCACCATGAAGAATGCTaGTTGGTCATTCCATCTCGT +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACHHEEC*LVIPSR
Trigger: ACGAGATGGAATGACCAACCAGCATTCTTCATGGTG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR CAA 90 bp GCTACCTTCAACCTGCACGGCATTAAGCTCCTCCTCCCCTTTCTATaGCCTCAGTCCTTAGAATACGATTCTTCCTTAGCTCTTGAATGG +
Preference number: 2 (lower is better)
Translates to: ATFNLHGIKLLLPFL*PQSLEYDSSLALEW
Trigger: CCATTCAAGAGCTAAGGAAGAATCGTATTCTAAGGACTGAGGCAATAGAAAGGGGAGGAGGAGCTTAATGCCGTGCAGGTTGAAGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGGGGAAGAAGGTCAATaGACTATTCTAAAAGAGTGG +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACGEEGQ*TILKEW
Trigger: CCACTCTTTTAGAATAGTTCATTGACCTTCTTCCCC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGATGGGGAACTACCCTaGACCAGTCAACGTAGCAGG +
Preference number: 2 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSDGELP*TSQRSR
Trigger: CCTGCTACGTTGACTGGTTCAGGGTAGTTCCCCATC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCACTACTGTGATGTTTaGTTTCCCAGAGATTCAAGA +
Preference number: 2 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFHYCDV*FPRDSR
Trigger: TCTTGAATCTCTGGGAAATCAAACATCACAGTAGTG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGAAACCGTGTTTAGAATaGTGTTCCTTAGAGGCAATC +
Preference number: 2 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQKPCLE*CSLEAI
Trigger: GATTGCCTCTAAGGAACAGCATTCTAAACACGGTTT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTAAACCGTGTTTAGAATaGTGTTCCTTAGAGGCAATC +
Preference number: 2 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFKPCLE*CSLEAI
Trigger: GATTGCCTCTAAGGAACAGCATTCTAAACACGGTTT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGAGGGCTTGGCACTGTaGGAGTGTTGCCGTCAGCAC +
Preference number: 2 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLEGLAL*ECCRQH
Trigger: GTGCTGACGGCAACACTCGCACAGTGCCAAGCCCTC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTTTAACTCCAGTTAATTaGTCGGGAGTACTGCTTTGT +
Preference number: 2 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFLTPVN*SGVLLC
Trigger: ACAAAGCAGTACTCCCGAGCAATTAACTGGAGTTAA...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCCGTACCTCCACAGATaGCCCGTGCCTCTTAGACAA +
Preference number: 2 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRPYLHR*PVPLRQ
Trigger: TTGTCTAAGAGGCACGGGCCATCTGTGGAGGTACGG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCAAAACCAGGAGGGCTTaGCACTGTGCGAGTGTTGCC +
Preference number: 2 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRKTRRA*HCASVA
Trigger: GGCAACACTCGCACAGTGCCAAGCCCTCCTGGTTTT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATATGTCAAGTTATTTTaGAAAGTACCTGTCGGGGAC +
Preference number: 2 (lower is better)
Translates to: RSFCDGRIREARLRWPRTYVKLF*KVPVGD
Trigger: GTCCCCGACAGGTACTTTCCAAAATAACTTGACATA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTAGGACCAAGGGTGGATaGGGAACTACCCTGAACCAG +
Preference number: 2 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSRTKGG*GTTLNQ
Trigger: CTGGTTCAGGGTAGTTCCCCATCCACCCTTGGTCCT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCCTCAGGACCAAGGGTaGATGGGGAACTACCCTGAA +
Preference number: 2 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSPQDQG*MGNYPE
Trigger: TTCAGGGTAGTTCCCCATCCACCCTTGGTCCTGAGG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAATAGAACTTTCAGGTaGCCCAAAAGTTCCACCAGA +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACNRTFR*PKSSTR
Trigger: TCTGGTGGAACTTTTGGGCCACCTGAAAGTTCTATT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACAGATTCTAGGCTTATaGAGCTCAATACTGGTTAAA +
Preference number: 2 (lower is better)
Translates to: RSFCDGRIREARLRWPRTQILGL*SSILVK
Trigger: TTTAACCAGTATTGAGCTTCATAAGCCTAGAATCTG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCAGATTCTAGGCTTATaGAGCTCAATACTGGTTAAA +
Preference number: 2 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFQILGL*SSILVK
Trigger: TTTAACCAGTATTGAGCTTCATAAGCCTAGAATCTG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCACTACTGTGATGTTTaGTTTCCCAGAGATTCAAGA +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACHYCDV*FPRDSR
Trigger: TCTTGAATCTCTGGGAAATCAAACATCACAGTAGTG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAAACCGTGTTTAGAATaGTGTTCCTTAGAGGCAATC +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACKPCLE*CSLEAI
Trigger: GATTGCCTCTAAGGAACAGCATTCTAAACACGGTTT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGCACTGTGCGAGTGTTaGCGTCAGCACAGAAAGCTT +
Preference number: 2 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSALCEC*RQHRKL
Trigger: AAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCTTCTTCATCAGCAATaGATTCCTAGTTTTCCCATG +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACLLHQQ*IPSFPM
Trigger: CATGGGAAAACTAGGAATGCATTGCTGATGAAGAAG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCCAGAAATTCACATTTaGATGCAAACAACCATAACC +
Preference number: 2 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFPEIHI*MQTTIT
Trigger: GGTTATGGTTGTTTGCATGCAAATGTGAATTTCTGG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAACTATTCTAAAAGAGTaGGTTTTGTGCTGTAACTCC +
Preference number: 2 (lower is better)
Translates to: RSFCDGRIREARLRWPRTTILKE*VLCCNS
Trigger: GGAGTTACAGCACAAAACCCACTCTTTTAGAATAGT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGTACTGCTTTGTGGGTaGGAATGTTTTAATTGTCTT +
Preference number: 2 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFVLLCG*ECFNCL
Trigger: AAGACAATTAAAACATTCCCACCCACAAAGCAGTAC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGATGGGGAACTACCCTaGACCAGTCAACGTAGCAGG +
Preference number: 2 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDDGELP*TSQRSR
Trigger: CCTGCTACGTTGACTGGTTCAGGGTAGTTCCCCATC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTACTATTCTAAAAGAGTaGGTTTTGTGCTGTAACTCC +
Preference number: 2 (lower is better)
Translates to: CLLACEPYKHPLPYSRACTILKE*VLCCNS
Trigger: GGAGTTACAGCACAAAACCCACTCTTTTAGAATAGT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCCGTACCTCCACAGATaGCCCGTGCCTCTTAGACAA +
Preference number: 2 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLPYLHR*PVPLRQ
Trigger: TTGTCTAAGAGGCACGGGCCATCTGTGGAGGTACGG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCCGTACCTCCACAGATaGCCCGTGCCTCTTAGACAA +
Preference number: 2 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDPYLHR*PVPLRQ
Trigger: TTGTCTAAGAGGCACGGGCCATCTGTGGAGGTACGG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATAAAACCAGGAGGGCTTaGCACTGTGCGAGTGTTGCC +
Preference number: 2 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDKTRRA*HCASVA
Trigger: GGCAACACTCGCACAGTGCCAAGCCCTCCTGGTTTT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGCATTTAATGTAAACTaGGGATCCGTTTACATTAGA +
Preference number: 2 (lower is better)
Translates to: RSFCDGRIREARLRWPRTAFNVN*GSVYIR
Trigger: TCTAATGTAAACGGATCCCCAGTTTACATTAAATGC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCGTTATCCCTATCTATaGCAGTCCAAACGCACAGCC +
Preference number: 2 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSRYPYL*QSKRTA
Trigger: GGCTGTGCGTTTGGACTGCCATAGATAGGGATAACG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR CAA 90 bp AAATGTTCACTCCCTTCTTCCTCATTACGCCCGATGACTTTACATTaGGGCTGCTGTCCCCTATGCCAGAAATTCACATTTGCATGCAAA +
Preference number: 2 (lower is better)
Translates to: KCSLPSSSLRPMTLH*GCCPLCQKFTFACK
Trigger: TTTGCATGCAAATGTGAATTTCTGGCATAGGGGACAGCAGCCCAAATGTAAAGTCATCGGGCGTAATGAGGAAGAAGGGAGTGAACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR CAA 90 bp GGTATGAATCCTCCTTCATTGAATGTAAACCAGCAACTAAAGTGCTaGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGG +
Preference number: 2 (lower is better)
Translates to: GMNPPSLNVNQQLKC*LACEPYKHPLPYSR
Trigger: CCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCACTTTAGTTGCTGGTTTACATTCAATGAAGGAGGATTCATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCACACAGCCATCTGACTaGAGGTCCTACAAGAGAAAC +
Preference number: 2 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRTQPSD*RSYKRN
Trigger: GTTTCTCTTGTAGGACCTGCAGTCAGATGGCTGTGT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCTCCACAGATGGCCCGTaGCTCTTAGACAAGCTATTT +
Preference number: 2 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRSTDGP*LLDKLF
Trigger: AAATAGCTTGTCTAAGAGGCACGGGCCATCTGTGGA...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTATTGCTCGGGAGTACTaGTTTGTGGGTGGGAATGTT +
Preference number: 2 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSIAREY*FVGGNV
Trigger: AACATTCCCACCCACAAAGCAGTACTCCCGAGCAAT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCCCACTGACTGGTCTTaGATTCAAGGGGTCCTTCCA +
Preference number: 2 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDPTDWS*IQGVLP
Trigger: TGGAAGGACCCCTTGAATCCAAGACCAGTCAGTGGG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTTTCTTCCTTAGCTCTTaGATGGCCAACAGCTGCTTT +
Preference number: 2 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSFFLSS*MANSCF
Trigger: AAAGCAGCTGTTGGCCATTCAAGAGCTAAGGAAGAA...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCCTCATTACGCCCGATaGCTTTACATTTGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDPHYAR*LYIWAA
Trigger: AGCAGCCCAAATGTAAAGTCATCGGGCGTAATGAGG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGGGAAACATTTTCTCTaGCACTCCTGCCCTGGTGTT +
Preference number: 2 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDGKHFL*HSCPGV
Trigger: AACACCAGGGCAGGAGTGCCAGAGAAAATGTTTCCC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTTCAAGATCCTTCTGTaGTGGAAGGATCAGAGAGGC +
Preference number: 2 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLFKILL*WKDQRG
Trigger: GCCTCTCTGATCCTTCCATCACAGAAGGATCTTGAA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTACACAGCCATCTGACTaGAGGTCCTACAAGAGAAAC +
Preference number: 2 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLTQPSD*RSYKRN
Trigger: GTTTCTCTTGTAGGACCTGCAGTCAGATGGCTGTGT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTCCACAGATGGCCCGTaGCTCTTAGACAAGCTATTT +
Preference number: 2 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLSTDGP*LLDKLF
Trigger: AAATAGCTTGTCTAAGAGGCACGGGCCATCTGTGGA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATATTGCTCGGGAGTACTaGTTTGTGGGTGGGAATGTT +
Preference number: 2 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDIAREY*FVGGNV
Trigger: AACATTCCCACCCACAAAGCAGTACTCCCGAGCAAT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTATTGCTCGGGAGTACTaGTTTGTGGGTGGGAATGTT +
Preference number: 2 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLIAREY*FVGGNV
Trigger: AACATTCCCACCCACAAAGCAGTACTCCCGAGCAAT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATAGTTCCACCAGAATTTaGCCTCCATCCATCAAGGCA +
Preference number: 2 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDSSTRI*PPSIKA
Trigger: TGCCTTGATGGATGGAGGGCAAATTCTGGTGGAACT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATAGGTGTGCTCACACTTaGTACCACAACACTGGTTCT +
Preference number: 2 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDRCAHT*YHNTGS
Trigger: AGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTATAAGCAGTCCACCATaGAGAATGCTGGTTGGTCAT +
Preference number: 2 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLISSPP*RMLVGH
Trigger: ATGACCAACCAGCATTCTTCATGGTGGACTGCTTAT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCAAACCGTGTTTAGAATaGTGTTCCTTAGAGGCAATC +
Preference number: 2 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRKPCLE*CSLEAI
Trigger: GATTGCCTCTAAGGAACAGCATTCTAAACACGGTTT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATTCAGCACAGAAAGCTTaGTACATGCAAGACTCCGTA +
Preference number: 2 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDSAQKA*YMQDSV
Trigger: TACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGA...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTTTAACTCCAGTTAATTaGTCGGGAGTACTGCTTTGT +
Preference number: 2 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSLTPVN*SGVLLC
Trigger: ACAAAGCAGTACTCCCGAGCAATTAACTGGAGTTAA...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTACTTTACATTTGGGCTaGTGTCCCCTATGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLTLHLG*CPLCQK
Trigger: TTTCTGGCATAGGGGACAGCAGCCCAAATGTAAAGT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGTCCACCATGAAGAATaGTGGTTGGTCATTCCATCT +
Preference number: 2 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLVHHEE*WLVIPS
Trigger: AGATGGAATGACCAACCAGCATTCTTCATGGTGGAC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTACACATCTAACCCACTaGGGAAGAAGGTCAATGAAC +
Preference number: 2 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLTHLTH*GRRSMN
Trigger: GTTCATTGACCTTCTTCCCCAGTGGGTTAGATGTGT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCGGTCTTTTAGTACGTaGGGATACACATCTAACCCA +
Preference number: 2 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDRSFST*GYTSNP
Trigger: TGGGTTAGATGTGTATCCCCACGTACTAAAAGACCG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTCCTTAGCTCTTGAATaGCCAACAGCTGCTTTCTTG +
Preference number: 2 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLSLALE*PTAAFL
Trigger: CAAGAAAGCAGCTGTTGGCCATTCAAGAGCTAAGGA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGGGGAAGAAGGTCAATaGACTATTCTAAAAGAGTGG +
Preference number: 2 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDGEEGQ*TILKEW
Trigger: CCACTCTTTTAGAATAGTTCATTGACCTTCTTCCCC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTACTATTCTAAAAGAGTaGGTTTTGTGCTGTAACTCC +
Preference number: 2 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSTILKE*VLCCNS
Trigger: GGAGTTACAGCACAAAACCCACTCTTTTAGAATAGT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGTACTGCTTTGTGGGTaGGAATGTTTTAATTGTCTT +
Preference number: 2 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSVLLCG*ECFNCL
Trigger: AAGACAATTAAAACATTCCCACCCACAAAGCAGTAC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTATGAAGAATGCTGGTTaGTCATTCCATCTCGTGCTT +
Preference number: 2 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLMKNAG*SFHLVL
Trigger: AAGCACGAGATGGAATGACCAACCAGCATTCTTCAT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR GCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATAAACCGTGTTTAGAATaGTGTTCCTTAGAGGCAATC +
Preference number: 2 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDKPCLE*CSLEAI
Trigger: GATTGCCTCTAAGGAACAGCATTCTAAACACGGTTT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGCATTTAATGTAAACTaGGGATCCGTTTACATTAGA +
Preference number: 2 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRAFNVN*GSVYIR
Trigger: TCTAATGTAAACGGATCCCCAGTTTACATTAAATGC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGCATTTAATGTAAACTaGGGATCCGTTTACATTAGA +
Preference number: 2 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSAFNVN*GSVYIR
Trigger: TCTAATGTAAACGGATCCCCAGTTTACATTAAATGC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATTATGTCAAGTTATTTTaGAAAGTACCTGTCGGGGAC +
Preference number: 2 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDYVKLF*KVPVGD
Trigger: GTCCCCGACAGGTACTTTCCAAAATAACTTGACATA...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTACTATTCTAAAAGAGTaGGTTTTGTGCTGTAACTCC +
Preference number: 2 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLTILKE*VLCCNS
Trigger: GGAGTTACAGCACAAAACCCACTCTTTTAGAATAGT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATACTATTCTAAAAGAGTaGGTTTTGTGCTGTAACTCC +
Preference number: 2 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDTILKE*VLCCNS
Trigger: GGAGTTACAGCACAAAACCCACTCTTTTAGAATAGT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR TCA 72 bp TCCACTGTAAACCTAGAGGGAGGGGTGGCCCGGGTGTaGTCCACAGGAGACTATGCAGGCCATCTCTCCCTC +
Preference number: 3 (lower is better)
Translates to: STVNLEGGVARV*STGDYAGHLSL
Trigger: GAGGGAGAGATGGCCTGCATAGTCTCCTGTGGATCACACCCGGGCCACCCCTCCCTCTAGGTTTACAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAAAAACCAGGAGGGCTaGGCACTGTGCGAGTGTTGC +
Preference number: 3 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLKNQEG*ALCECC
Trigger: GCAACACTCGCACAGTGCCAAGCCCTCCTGGTTTTT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGTCAGCACAGAAAGCTaGCTACATGCAAGACTCCGT +
Preference number: 3 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLVSTES*LHARLR
Trigger: ACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGGCACTGTGCGAGTGTaGCCGTCAGCACAGAAAGCT +
Preference number: 3 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFGTVRV*PSAQKA
Trigger: AGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGGCACTGTGCGAGTGTaGCCGTCAGCACAGAAAGCT +
Preference number: 3 (lower is better)
Translates to: RSFCDGRIREARLRWPRTGTVRV*PSAQKA
Trigger: AGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCAGCAACTAAAGTGCTaGTTAGCCTGTGAGCCCTAC +
Preference number: 3 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLQQLKC*LACEPY
Trigger: GTAGGGCTCACAGGCTAACAAGCACTTTAGTTGCTG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAAAAAACCAGGAGGGCTaGGCACTGTGCGAGTGTTGC +
Preference number: 3 (lower is better)
Translates to: RSFCDGRIREARLRWPRTKNQEG*ALCECC
Trigger: GCAACACTCGCACAGTGCCAAGCCCTCCTGGTTTTT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATGGAGCCACTACTTCTaGGCCATGACCTCTGGGAAG +
Preference number: 3 (lower is better)
Translates to: RSFCDGRIREARLRWPRTWSHYF*AMTSGK
Trigger: CTTCCCAGAGGTCATGGCCAAGAAGTAGTGGCTCCA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCATGAAGAATGCTGGTaGGTCATTCCATCTCGTGCT +
Preference number: 3 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLHEECW*VIPSRA
Trigger: AGCACGAGATGGAATGACCAACCAGCATTCTTCATG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGGTGGCATCACTGGCTaGTTGAGTGGTACATTTTCT +
Preference number: 3 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLGGITG*LSGTFS
Trigger: AGAAAATGTACCACTCAACAAGCCAGTGATGCCACC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR TCA 72 bp CCAGCCTCAGGACCAAGGGTGGATGGGGAACTACCCTaGACCAGTCAACGTAGCAGGCTACAATTAACTCCA +
Preference number: 3 (lower is better)
Translates to: PASGPRVDGELP*TSQRSRLQLTP
Trigger: TGGAGTTAATTGTAGCCTGCTACGTTGACTGGTTCAGGGTAGTTCCCCATCCACCCTTGGTCCTGAGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAAAAACCAGGAGGGCTaGGCACTGTGCGAGTGTTGC +
Preference number: 3 (lower is better)
Translates to: CLLACEPYKHPLPYSRACKNQEG*ALCECC
Trigger: GCAACACTCGCACAGTGCCAAGCCCTCCTGGTTTTT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACCGATGACTTTACATTaGGGCTGCTGTCCCCTATGC +
Preference number: 3 (lower is better)
Translates to: RSFCDGRIREARLRWPRTPMTLH*GCCPLC
Trigger: GCATAGGGGACAGCAGCCCAAATGTAAAGTCATCGG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAGCAAAGTTTTTGTTTaGTGCCTTCAAAAACCGGTC +
Preference number: 3 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLSKVFV*CLQKPV
Trigger: GACCGGTTTTTGAAGGCACAAAACAAAAACTTTGCT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGCCAGAAATTCACATTaGCATGCAAACAACCATAAC +
Preference number: 3 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLARNSH*HANNHN
Trigger: GTTATGGTTGTTTGCATGCAAATGTGAATTTCTGGC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAAGTTCCACCAGAATTaGCCCTCCATCCATCAAGGC +
Preference number: 3 (lower is better)
Translates to: CLLACEPYKHPLPYSRACKFHQN*PSIHQG
Trigger: GCCTTGATGGATGGAGGGCAAATTCTGGTGGAACTT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGGAATATATACACAATaGCTGAGTCGTTATCCCTAT +
Preference number: 3 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLGIYTQ*LSRYPY
Trigger: ATAGGGATAACGACTCAGCAATTGTGTATATATTCC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAATTTGCATTCAGTTCTaGGAGCCACTACTTCTTGGC +
Preference number: 3 (lower is better)
Translates to: RSFCDGRIREARLRWPRTICIQF*EPLLLG
Trigger: GCCAAGAAGTAGTGGCTCCAAGAACTGAATGCAAAT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCAAGGCAGGAGTTCTTaGTTTAGTGGAAAGCAGAAC +
Preference number: 3 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFQGRSS*FSGKQN
Trigger: GTTCTGCTTTCCACTAAACAAAGAACTCCTGCCTTG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACAAGGCAGGAGTTCTTaGTTTAGTGGAAAGCAGAAC +
Preference number: 3 (lower is better)
Translates to: RSFCDGRIREARLRWPRTQGRSS*FSGKQN
Trigger: GTTCTGCTTTCCACTAAACAAAGAACTCCTGCCTTG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR GCA 72 bp ATTAAAAACCAGGAGGGCTTGGCACTGTGCGAGTGTTaGCGTCAGCACAGAAAGCTTGCTACATGCAAGACT +
Preference number: 3 (lower is better)
Translates to: IKNQEGLALCEC*RQHRKLATCKT
Trigger: AGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCCTCCTGGTTTTTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGGCACTGTGCGAGTGTaGCCGTCAGCACAGAAAGCT +
Preference number: 3 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRGTVRV*PSAQKA
Trigger: AGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCTATGTCAAGTTATTTaGGAAAGTACCTGTCGGGGA +
Preference number: 3 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFLCQVI*ESTCRG
Trigger: TCCCCGACAGGTACTTTCCAAAATAACTTGACATAG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTATTTGCATTCAGTTCTaGGAGCCACTACTTCTTGGC +
Preference number: 3 (lower is better)
Translates to: CLLACEPYKHPLPYSRACICIQF*EPLLLG
Trigger: GCCAAGAAGTAGTGGCTCCAAGAACTGAATGCAAAT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR TCA 72 bp GTAAATGTTCACTCCCTTCTTCCTCATTACGCCCGATaGCTTTACATTTGGGCTGCTGTCCCCTATGCCAGA +
Preference number: 3 (lower is better)
Translates to: VNVHSLLPHYAR*LYIWAAVPYAR
Trigger: TCTGGCATAGGGGACAGCAGCCCAAATGTAAAGTCATCGGGCGTAATGAGGAAGAAGGGAGTGAACATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAAGCAAAGTTTTTGTTTaGTGCCTTCAAAAACCGGTC +
Preference number: 3 (lower is better)
Translates to: RSFCDGRIREARLRWPRTSKVFV*CLQKPV
Trigger: GACCGGTTTTTGAAGGCACAAAACAAAAACTTTGCT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCTATGTCAAGTTATTTaGGAAAGTACCTGTCGGGGA +
Preference number: 3 (lower is better)
Translates to: CLLACEPYKHPLPYSRACLCQVI*ESTCRG
Trigger: TCCCCGACAGGTACTTTCCAAAATAACTTGACATAG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGGAATATATACACAATaGCTGAGTCGTTATCCCTAT +
Preference number: 3 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFGIYTQ*LSRYPY
Trigger: ATAGGGATAACGACTCAGCAATTGTGTATATATTCC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTTGGTGTTTAAATACCTaGCTTCTTCATCAGCAATGC +
Preference number: 3 (lower is better)
Translates to: CLLACEPYKHPLPYSRACWCLNT*LLHQQC
Trigger: GCATTGCTGATGAAGAAGCAAGGTATTTAAACACCA...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR TCA 72 bp TTGCATTCAGTTCTTGGAGCCACTACTTCTTGGCCATaGCCTCTGGGAAGTTATTTAACCTCTCTGGGCCTT +
Preference number: 3 (lower is better)
Translates to: LHSVLGATTSWP*PLGSYLTSLGL
Trigger: AAGGCCCAGAGAGGTTAAATAACTTCCCAGAGGTCATGGCCAAGAAGTAGTGGCTCCAAGAACTGAATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR GCA 72 bp TCTTCCTCATTACGCCCGATGACTTTACATTTGGGCTaGTGTCCCCTATGCCAGAAATTCACATTTGCATGC +
Preference number: 3 (lower is better)
Translates to: SSSLRPMTLHLG*CPLCQKFTFAC
Trigger: GCATGCAAATGTGAATTTCTGGCATAGGGGACAGCAGCCCAAATGTAAAGTCATCGGGCGTAATGAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR CCA 72 bp AGTGGGTTTTGTGCTGTAACTCCCACTGACTGGTCTTaGATTCAAGGGGTCCTTCCACTTTACAATGAACTG +
Preference number: 3 (lower is better)
Translates to: SGFCAVTPTDWS*IQGVLPLYNEL
Trigger: CAGTTCATTGTAAAGTGGAAGGACCCCTTGAATCCAAGACCAGTCAGTGGGAGTTACAGCACAAAACCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR CCA 72 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATaGCCCGTGCCTCTTAGACAAGCTATTTTAACATAC +
Preference number: 3 (lower is better)
Translates to: KLATCKTPYLHR*PVPLRQAILTY
Trigger: GTATGTTAAAATAGCTTGTCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR CCA 72 bp GAAATTCCTCTTAGTCCTGGGAATAGAACTTTCAGGTaGCCCAAAAGTTCCACCAGAATTTGCCCTCCATCC +
Preference number: 3 (lower is better)
Translates to: EIPLSPGNRTFR*PKSSTRICPPS
Trigger: GGATGGAGGGCAAATTCTGGTGGAACTTTTGGGCCACCTGAAAGTTCTATTCCCAGGACTAAGAGGAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGGAATATATACACAATaGCTGAGTCGTTATCCCTAT +
Preference number: 3 (lower is better)
Translates to: CLLACEPYKHPLPYSRACGIYTQ*LSRYPY
Trigger: ATAGGGATAACGACTCAGCAATTGTGTATATATTCC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATTGGAGCCACTACTTCTaGGCCATGACCTCTGGGAAG +
Preference number: 3 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDWSHYF*AMTSGK
Trigger: CTTCCCAGAGGTCATGGCCAAGAAGTAGTGGCTCCA...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTGGAGCCACTACTTCTaGGCCATGACCTCTGGGAAG +
Preference number: 3 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLWSHYF*AMTSGK
Trigger: CTTCCCAGAGGTCATGGCCAAGAAGTAGTGGCTCCA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR GCA 72 bp CTAGGGCCTGTTTTTCTCTGTCCAGAGCTCTTAGCGTaGTTTATCTCCCAAAGATCCTCAATGATAAGCAGT +
Preference number: 3 (lower is better)
Translates to: LGPVFLCPELLA*FISQRSSMISS
Trigger: ACTGCTTATCATTGAGGATCTTTGGGAGATAAAGCACGCTAAGAGCTCTGGACAGAGAAAAACAGGCCCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCCGATGACTTTACATTaGGGCTGCTGTCCCCTATGC +
Preference number: 3 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDPMTLH*GCCPLC
Trigger: GCATAGGGGACAGCAGCCCAAATGTAAAGTCATCGG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR TCA 72 bp ATCTCCCAAAGATCCTCAATGATAAGCAGTCCACCATaGAGAATGCTGGTTGGTCATTCCATCTCGTGCTTT +
Preference number: 3 (lower is better)
Translates to: ISQRSSMISSPP*RMLVGHSISCF
Trigger: AAAGCACGAGATGGAATGACCAACCAGCATTCTTCATGGTGGACTGCTTATCATTGAGGATCTTTGGGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR GCA 72 bp AATCCTCCTTCATTGAATGTAAACCAGCAACTAAAGTaGTTGTTAGCCTGTGAGCCCTACAAACACCCACTC +
Preference number: 3 (lower is better)
Translates to: NPPSLNVNQQLK*LLACEPYKHPL
Trigger: GAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCACTTTAGTTGCTGGTTTACATTCAATGAAGGAGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGTCAGCACAGAAAGCTaGCTACATGCAAGACTCCGT +
Preference number: 3 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLVSTES*LHARLR
Trigger: ACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCAGCAACTAAAGTGCTaGTTAGCCTGTGAGCCCTAC +
Preference number: 3 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLQQLKC*LACEPY
Trigger: GTAGGGCTCACAGGCTAACAAGCACTTTAGTTGCTG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR TCA 72 bp AACAGCTGCTTTCTTGAGAGAGATGAAAACTGCCATTaGCATAGCACAGAATTAAAAACCAGGAGGGCTTGG +
Preference number: 3 (lower is better)
Translates to: NSCFLERDENCH*HSTELKTRRAW
Trigger: CCAAGCCCTCCTGGTTTTTAATTCTGTGCTATGTCAATGGCAGTTTTCATCTCTCTCAAGAAAGCAGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR GCA 72 bp GAAAGAAAAGATAATGTTACAATGCTACCTTCAACCTaGACGGCATTAAGCTCCTCCTCCCCTTTCTATTGC +
Preference number: 3 (lower is better)
Translates to: ERKDNVTMLPST*TALSSSSPFYC
Trigger: GCAATAGAAAGGGGAGGAGGAGCTTAATGCCGTGCAGGTTGAAGGTAGCATTGTAACATTATCTTTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR TCA 72 bp CCTCTTAGACAAGCTATTTTAACATACACAGCCATCTaGCTGCAGGTCCTACAAGAGAAACCGTGTTTAGAA +
Preference number: 3 (lower is better)
Translates to: PLRQAILTYTAI*LQVLQEKPCLE
Trigger: TTCTAAACACGGTTTCTCTTGTAGGACCTGCAGTCAGATGGCTGTGTATGTTAAAATAGCTTGTCTAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR GCA 72 bp AGTTATTTAACCTCTCTGGGCCTTCAGAGGGCTATCTaGAACATAAGAATGATAGTATCTCCTCTTCAAGGT +
Preference number: 3 (lower is better)
Translates to: SYLTSLGLQRAI*NIRMIVSPLQG
Trigger: ACCTTGAAGAGGAGATACTATCATTCTTATGTTGCAGATAGCCCTCTGAAGGCCCAGAGAGGTTAAATAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCAGCAAAGTTTTTGTTTaGTGCCTTCAAAAACCGGTC +
Preference number: 3 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRSKVFV*CLQKPV
Trigger: GACCGGTTTTTGAAGGCACAAAACAAAAACTTTGCT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTAGCAAAGTTTTTGTTTaGTGCCTTCAAAAACCGGTC +
Preference number: 3 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSSKVFV*CLQKPV
Trigger: GACCGGTTTTTGAAGGCACAAAACAAAAACTTTGCT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTTGTGCAACAGGATATaGTTTAGGTGTGCTCACACT +
Preference number: 3 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLLCNRI*FRCAHT
Trigger: AGTGTGAGCACACCTAAACAATATCCTGTTGCACAA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATTTGTGCAACAGGATATaGTTTAGGTGTGCTCACACT +
Preference number: 3 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDLCNRI*FRCAHT
Trigger: AGTGTGAGCACACCTAAACAATATCCTGTTGCACAA...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR CCA 72 bp TTGTGCAACAGGATATTGTTTAGGTGTGCTCACACTTaGTACCACAACACTGGTTCTATCTCTCATTCTAAT +
Preference number: 3 (lower is better)
Translates to: LCNRILFRCAHT*YHNTGSISHSN
Trigger: ATTAGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAATATCCTGTTGCACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATAGCAAAGTTTTTGTTTaGTGCCTTCAAAAACCGGTC +
Preference number: 3 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDSKVFV*CLQKPV
Trigger: GACCGGTTTTTGAAGGCACAAAACAAAAACTTTGCT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTGGTGTTTAAATACCTaGCTTCTTCATCAGCAATGC +
Preference number: 3 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLWCLNT*LLHQQC
Trigger: GCATTGCTGATGAAGAAGCAAGGTATTTAAACACCA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGCCAGAAATTCACATTaGCATGCAAACAACCATAAC +
Preference number: 3 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDARNSH*HANNHN
Trigger: GTTATGGTTGTTTGCATGCAAATGTGAATTTCTGGC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR TCA 72 bp CTGTATTTCAGAGTTTTGGAATATATACACAATTGCTaGGTCGTTATCCCTATCTATGGCAGTCCAAACGCA +
Preference number: 3 (lower is better)
Translates to: LYFRVLEYIHNC*VVIPIYGSPNA
Trigger: TGCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCCAAAACTCTGAAATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGGAATATATACACAATaGCTGAGTCGTTATCCCTAT +
Preference number: 3 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLGIYTQ*LSRYPY
Trigger: ATAGGGATAACGACTCAGCAATTGTGTATATATTCC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTATGAATCCTCCTTCATaGAATGTAAACCAGCAACTA +
Preference number: 3 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLMNPPS*NVNQQL
Trigger: TAGTTGCTGGTTTACATTCAATGAAGGAGGATTCAT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR CCA 72 bp GCCATCCAAGTTAAGACTGACTGTATTTCAGAGTTTTaGAATATATACACAATTGCTGAGTCGTTATCCCTA +
Preference number: 3 (lower is better)
Translates to: AIQVKTDCISEF*NIYTIAESLSL
Trigger: TAGGGATAACGACTCAGCAATTGTGTATATATTCCAAAACTCTGAAATACAGTCAGTCTTAACTTGGATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATCTCACCTCCGGCAGTaGCAGCGAGCGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQSHLRQ*QRAPPP
Trigger: CGGCGGCGGCGCTCGCTGTCACTGCCGGAGGTGAGA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTTCTCACCTCCGGCAGTaGCAGCGAGCGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFSHLRQ*QRAPPP
Trigger: CGGCGGCGGCGCTCGCTGTCACTGCCGGAGGTGAGA...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGTGTCCGAGGCCCCCTaGCTGTCGGTGACTCGCAAG +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLVSEAP*LSVTRK
Trigger: CTTGCGAGTCACCGACAGTCAGGGGGCCTCGGACAC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAGCTCAGGGTCCTGCTaGGTCTCCGCTGGCACCGCA +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLSSGSC*VSAGTA
Trigger: TGCGGTGCCAGCGGAGACGCAGCAGGACCCTGAGCT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCACTGCTGGCGACACTaGAGCTCGCCCCATGCGTTG +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLHCWRH*SSPHAL
Trigger: CAACGCATGGGGCGAGCTTCAGTGTCGCCAGCAGTG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGCCCGCGGCAGCTTCTaGAGGCTCGGGGAAAGCGCG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQARGSF*RLGESA
Trigger: CGCGCTTTCCCCGAGCCTGCAGAAGCTGCCGCGGGC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378214.8
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCGTTGCTGCTGGCCCTaGGCATCACTCGCCGTCCCA +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPRCCWP*ASLAVP
Trigger: TGGGACGGCGAGTGATGCTCAGGGCCAGCAGCAACG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGTGATGGCAGGCTTCTaGGGCGGCCCTGAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLVMAGF*GGPEES
Trigger: ACTCTCTTCAGGGCCGCCTCAGAAGCCTGCCATCAC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGTGTCCGAGGCCCCCTaGCTGTCGGTGACTCGCAAG +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPVSEAP*LSVTRK
Trigger: CTTGCGAGTCACCGACAGTCAGGGGGCCTCGGACAC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATGGAGCTCAGGGTCCTaGTGCGTCTCCGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQWSSGS*CVSAGT
Trigger: GGTGCCAGCGGAGACGCAGCAGGACCCTGAGCTCCA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGGTGTTGGGATGCTGTaGTCTGTACTCCCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLGVGML*SVLPGV
Trigger: CACCCCGGGGAGTACAGAGCACAGCATCCCAACACC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGTGCCCAACACCAACCTaGAGGGTCAGCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLCPTPT*RVSSTR
Trigger: CCTGGTGGAGCTGACCCTGCAGGTTGGTGTTGGGCA...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCTGCTGCGTCTCCGCTaGCACCGCAGGACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPLLRLR*HRRTVS
Trigger: GGAGACAGTCCTGCGGTGCCAGCGGAGACGCAGCAG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCCAGCTGCTGGACTCTaGCCATCCCGGATCCACAGA +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLPAAGL*PSRIHR
Trigger: TCTGTGGATCCGGGATGGCCAGAGTCCAGCAGCTGG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCGTTGCTGCTGGCCCTaGGCATCACTCGCCGTCCCA +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFRCCWP*ASLAVP
Trigger: TGGGACGGCGAGTGATGCTCAGGGCCAGCAGCAACG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGACGTTGCTGCTGGCCCTaGGCATCACTCGCCGTCCCA +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRRCCWP*ASLAVP
Trigger: TGGGACGGCGAGTGATGCTCAGGGCCAGCAGCAACG...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACACTGCTGGCGACACTaGAGCTCGCCCCATGCGTTG +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQHCWRH*SSPHAL
Trigger: CAACGCATGGGGCGAGCTTCAGTGTCGCCAGCAGTG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGCACCACACAGTGGGTaGTGGCAGGCTTCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPAPHSG*WQASEA
Trigger: CGCCTCAGAAGCCTGCCATCACCCACTGTGTGGTGC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGCACCACACAGTGGGTaGTGGCAGGCTTCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQAPHSG*WQASEA
Trigger: CGCCTCAGAAGCCTGCCATCACCCACTGTGTGGTGC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCACCAGCAGCAGCAATaGAGAGAGCACACCTGTGGG +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLHQQQQ*REHTCG
Trigger: CCCACAGGTGTGCTCTCTTCATTGCTGCTGCTGGTG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAGCTGTGCAGGCCTCTaGACAGGCCGGAGCACAAAA +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLSCAGL*TGRSTK
Trigger: TTTTGTGCTCCGGCCTGTTCAGAGGCCTGCACAGCT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCTCCAACAGAGGAGTTaGAGGCCCCCTCGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFLQQRS*RPPRCP
Trigger: CGGGCAGCGAGGGGGCCTTCAACTCCTCTGTTGGAG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGTCTTCACAGCCACAGTaGGGGTGGACGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLSSQPQ*GWTCCS
Trigger: TGAGCAGCACGTCCACCCTCACTGTGGCTGTGAAGA...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGTGTCCGAGGCCCCCTaGCTGTCGGTGACTCGCAAG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQVSEAP*LSVTRK
Trigger: CTTGCGAGTCACCGACAGTCAGGGGGCCTCGGACAC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGGGGTGGCCCGGGTGTaGTCCACAGGAGACTATGCA +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPGVARV*STGDYA
Trigger: TGCATAGTCTCCTGTGGATCACACCCGGGCCACCCC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGGGGTGGCCCGGGTGTaGTCCACAGGAGACTATGCA +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASGVARV*STGDYA
Trigger: TGCATAGTCTCCTGTGGATCACACCCGGGCCACCCC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGATGTCCTCCCCTCGCTaGACTGCTTACGGGCACAAC +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLMSSPR*TAYGHN
Trigger: GTTGTGCCCGTAAGCAGTGCAGCGAGGGGAGGACAT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTTGGAGCTCAGGGTCCTaGTGCGTCTCCGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFWSSGS*CVSAGT
Trigger: GGTGCCAGCGGAGACGCAGCAGGACCCTGAGCTCCA...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGATGACATCTCCAGCTaGTGGACTCTGGCCATCCCG +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLDDISS*WTLAIP
Trigger: CGGGATGGCCAGAGTCCAGCAGCTGGAGATGTCATC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTACTCGGCACTCCCTCTaGGCTCCTGCTTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASTRHSL*APACHW
Trigger: CCAGTGGCAAGCAGGAGCCCAGAGGGAGTGCCGAGT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGACTCGGCACTCCCTCTaGGCTCCTGCTTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPTRHSL*APACHW
Trigger: CCAGTGGCAAGCAGGAGCCCAGAGGGAGTGCCGAGT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGCTGCTGCGTCTCCGCTaGCACCGCAGGACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQLLRLR*HRRTVS
Trigger: GGAGACAGTCCTGCGGTGCCAGCGGAGACGCAGCAG...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGACATCTCCAGCTGCTaGACTCTGGCCATCCCGGAT +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLDISSC*TLAIPD
Trigger: ATCCGGGATGGCCAGAGTCCAGCAGCTGGAGATGTC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGCTGCACTTCCACAGTaGCAGTGTCTGTGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLAALPQ*QCLCPR
Trigger: CCTCGGACACAGACACTGCCACTGTGGAAGTGCAGC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGTGCTGAGATCCGAGTaGGCCCGAATCTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLVLRSE*ARIFWT
Trigger: GGTCCAGAAGATTCGGGCCCACTCGGATCTCAGCAC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGACACTGCTGGCGACACTaGAGCTCGCCCCATGCGTTG +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRHCWRH*SSPHAL
Trigger: CAACGCATGGGGCGAGCTTCAGTGTCGCCAGCAGTG...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACACTGCTGGCGACACTaGAGCTCGCCCCATGCGTTG +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTHCWRH*SSPHAL
Trigger: CAACGCATGGGGCGAGCTTCAGTGTCGCCAGCAGTG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGTGAGGGGGTCGCAGTaGCCATGGCCAGAACACTTC +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPVRGSQ*PWPEHF
Trigger: GAAGTGTTCTGGCCATGGTCACTGCGACCCCCTCAC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGTGAGGGGGTCGCAGTaGCCATGGCCAGAACACTTC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASVRGSQ*PWPEHF
Trigger: GAAGTGTTCTGGCCATGGTCACTGCGACCCCCTCAC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGATGGGGAACTACCCTaGACCAGTCAACGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLDGELP*TSQRSR
Trigger: CCTGCTACGTTGACTGGTTCAGGGTAGTTCCCCATC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGCTGAAGCTCGCCCCATaGGTTGCTGCTGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQLKLAP*VAAGPE
Trigger: CTCAGGGCCAGCAGCAACGCATGGGGCGAGCTTCAG...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACTGAAGCTCGCCCCATaGGTTGCTGCTGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTLKLAP*VAAGPE
Trigger: CTCAGGGCCAGCAGCAACGCATGGGGCGAGCTTCAG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGACTGAAGCTCGCCCCATaGGTTGCTGCTGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRLKLAP*VAAGPE
Trigger: CTCAGGGCCAGCAGCAACGCATGGGGCGAGCTTCAG...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACTCCCCTCGCTGCACTaGTTACGGGCACAACCTGCA +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQLPSLH*LRAQPA
Trigger: TGCAGGTTGTGCCCGTAAGCAGTGCAGCGAGGGGAG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378214.8
ENST00000537886.5
CDS-3UTR GCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTCACAGCAAGCGGCCGTaGAGTCTACGACAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASHSKRP*SLRQGR
Trigger: CCTTCCCTGTCGTAGACTGCACGGCCGCTTGCTGTG...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACACAGCAAGCGGCCGTaGAGTCTACGACAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQHSKRP*SLRQGR
Trigger: CCTTCCCTGTCGTAGACTGCACGGCCGCTTGCTGTG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGGTGTTGGGATGCTGTaGTCTGTACTCCCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASGVGML*SVLPGV
Trigger: CACCCCGGGGAGTACAGAGCACAGCATCCCAACACC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGGACTCAGAGGGGGCTaGGCTAGTGGGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQGLRGG*ASGRCW
Trigger: CCAACACCTCCCACTAGCGCAGCCCCCTCTGAGTCC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGGACTCAGAGGGGGCTaGGCTAGTGGGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFGLRGG*ASGRCW
Trigger: CCAACACCTCCCACTAGCGCAGCCCCCTCTGAGTCC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGGCGTCTGTACTCCCTaGATGACCACATGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLGVCTP*MTTCLP
Trigger: GGGCAAACATGTGGTCATGCAGGGAGTACAGACGCC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGCACAAGAACATGTCTaGCACCAGCCCGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASAQEHV*HQPGLW
Trigger: CCAGAGCCCGGGCTGGTGGCAGACATGTTCTTGTGC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGCACAAGAACATGTCTaGCACCAGCCCGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPAQEHV*HQPGLW
Trigger: CCAGAGCCCGGGCTGGTGGCAGACATGTTCTTGTGC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACGCTGCTCTGTCAGCTaGCCAACACCAACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQRCSVS*PTPTCR
Trigger: CCTGCAGGTTGGTGTTGGGCAGCTGACAGAGCAGCG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTAAGAGAGCACACCTGTaGGGGGCGCCATTGTGCACC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASKRAHL*GAPLCT
Trigger: GGTGCACAATGGCGCCCCCCACAGGTGTGCTCTCTT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAACTCGGCACTCCCTCTaGGCTCCTGCTTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRTRHSL*APACHW
Trigger: CCAGTGGCAAGCAGGAGCCCAGAGGGAGTGCCGAGT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGTAGCTCAGATGGGGTaGACTCAGAGGGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQVAQMG*TQRGLR
Trigger: GCGCAGCCCCCTCTGAGTCCACCCCATCTGAGCTAC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGTAGCTCAGATGGGGTaGACTCAGAGGGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFVAQMG*TQRGLR
Trigger: GCGCAGCCCCCTCTGAGTCCACCCCATCTGAGCTAC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGCCGGCCACAGCCACTaGAGGTCTATTGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLAGHSH*RSIVFR
Trigger: CCTGAAAACAATAGACCTCCAGTGGCTGTGGCCGGC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCCAGCTGCTGGACTCTaGCCATCCCGGATCCACAGA +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPPAAGL*PSRIHR
Trigger: TCTGTGGATCCGGGATGGCCAGAGTCCAGCAGCTGG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTCCAGCTGCTGGACTCTaGCCATCCCGGATCCACAGA +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASPAAGL*PSRIHR
Trigger: TCTGTGGATCCGGGATGGCCAGAGTCCAGCAGCTGG...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGTCGGTGACTCGCAAGTaGAAAGTGTACACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLSVTRK*KVYTPS
Trigger: GGAGGGGGTGTACACTTTCCACTTGCGAGTCACCGA...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCCCGCGCACAAAAGGTaGCATCACTGGCTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLPAHKR*HHWLVE
Trigger: CTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTAAGCCCAAGACAGGCTaGAGCTACTGCTGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASKPKTG*SYCCAL
Trigger: GAGAGCGCAGCAGTAGCTTCAGCCTGTCTTGGGCTT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACTTCTGAGGCGGCCCTaGAGAGAGTTTGGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQLLRRP*REFGAS
Trigger: GCTTGCACCAAACTCTCTTCAGGGCCGCCTCAGAAG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCTTCTGAGGCGGCCCTaGAGAGAGTTTGGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPLLRRP*REFGAS
Trigger: GCTTGCACCAAACTCTCTTCAGGGCCGCCTCAGAAG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGTGATGGCAGGCTTCTaGGGCGGCCCTGAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQVMAGF*GGPEES
Trigger: ACTCTCTTCAGGGCCGCCTCAGAAGCCTGCCATCAC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGCACCACACAGTGGGTaGTGGCAGGCTTCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACAPHSG*WQASEA
Trigger: CGCCTCAGAAGCCTGCCATCACCCACTGTGTGGTGC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACACCAGCAGCAGCAATaGAGAGAGCACACCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQHQQQQ*REHTCG
Trigger: CCCACAGGTGTGCTCTCTTCATTGCTGCTGCTGGTG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGAGCTGTGCAGGCCTCTaGACAGGCCGGAGCACAAAA +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPSCAGL*TGRSTK
Trigger: TTTTGTGCTCCGGCCTGTTCAGAGGCCTGCACAGCT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATCTTCACAGCCACAGTaGGGGTGGACGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQSSQPQ*GWTCCS
Trigger: TGAGCAGCACGTCCACCCTCACTGTGGCTGTGAAGA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGGTCAGAGCCATCGATaGCATCTCCAGCTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASGQSHR*HLQLLD
Trigger: GTCCAGCAGCTGGAGATGTCATCGATGGCTCTGACC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTCCCCCTGACTGTCGGTaGCTCGCAAGTGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASPPDCR*LASGKC
Trigger: ACACTTTCCACTTGCGAGTCACCGACAGTCAGGGGG...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGTCAGCCTTCTCCTTTaGGAGCCGCATGTGCAGATT +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLVSLLL*EPHVQI
Trigger: AATCTGCACATGCGGCTCTCAAAGGAGAAGGCTGAC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGTGAGGGGGTCGCAGTaGCCATGGCCAGAACACTTC +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTVRGSQ*PWPEHF
Trigger: GAAGTGTTCTGGCCATGGTCACTGCGACCCCCTCAC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGTGAGGGGGTCGCAGTaGCCATGGCCAGAACACTTC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFVRGSQ*PWPEHF
Trigger: GAAGTGTTCTGGCCATGGTCACTGCGACCCCCTCAC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGTGCTTGTTAGCCTGTaGGCCCTACAAACACCCACT +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLVLVSL*ALQTPT
Trigger: AGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCAC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCACAGCAAGCGGCCGTaGAGTCTACGACAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFHSKRP*SLRQGR
Trigger: CCTTCCCTGTCGTAGACTGCACGGCCGCTTGCTGTG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCTCTGGGCTCCTGCTTaGCACTGGGTTGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPLWAPA*HWVARG
Trigger: ACCTCTTGCAACCCAGTGGCAAGCAGGAGCCCAGAG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATGGGAGGTGTTGGGATaGTGTGCTCTGTACTCCCCG +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQWEVLG*CALYSP
Trigger: CGGGGAGTACAGAGCACAGCATCCCAACACCTCCCA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGGACTCAGAGGGGGCTaGGCTAGTGGGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACGLRGG*ASGRCW
Trigger: CCAACACCTCCCACTAGCGCAGCCCCCTCTGAGTCC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGCACAAGAACATGTCTaGCACCAGCCCGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTAQEHV*HQPGLW
Trigger: CCAGAGCCCGGGCTGGTGGCAGACATGTTCTTGTGC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGCACAAGAACATGTCTaGCACCAGCCCGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQAQEHV*HQPGLW
Trigger: CCAGAGCCCGGGCTGGTGGCAGACATGTTCTTGTGC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATGCCCAACACCAACCTaGAGGGTCAGCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRCPTPT*RVSSTR
Trigger: CCTGGTGGAGCTGACCCTGCAGGTTGGTGTTGGGCA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGACGCTGCTCTGTCAGCTaGCCAACACCAACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRRCSVS*PTPTCR
Trigger: CCTGCAGGTTGGTGTTGGGCAGCTGACAGAGCAGCG...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGAGGGTGTCCTTCCGCTaGTCTGTCAGCTGCCCAACA +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPRVSFR*SVSCPT
Trigger: TGTTGGGCAGCTGACAGAGCAGCGGAAGGACACCCT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGATCAGGCTGGAGTTGTaGTCTGTGCTTCGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLIRLEL*SVLRCL
Trigger: CAAGCACCGAAGCACAGAGCACAACTCCAGCCTGAT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAGAGGGCTTGGCACTGTaGGAGTGTTGCCGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLREGLAL*ECCRQH
Trigger: GTGCTGACGGCAACACTCGCACAGTGCCAAGCCCTC...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGATCCACAGGAGACTATaGAGGCCATCTCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLIHRRL*RPSLPL
Trigger: CAGAGGGAGAGATGGCCTGCATAGTCTCCTGTGGAT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTCTCCCCTCGCTGCACTaGTTACGGGCACAACCTTCT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASLPSLH*LRAQPS
Trigger: AGAAGGTTGTGCCCGTAAGCAGTGCAGCGAGGGGAG...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTCCAGAGGAGCGAATCTaGACCAAGCCCAAGACAGGC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASPEERI*TKPKTG
Trigger: GCCTGTCTTGGGCTTGGTCCAGATTCGCTCCTCTGG...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCCAGAGGAGCGAATCTaGACCAAGCCCAAGACAGGC +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPPEERI*TKPKTG
Trigger: GCCTGTCTTGGGCTTGGTCCAGATTCGCTCCTCTGG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAAAGAGAGCACACCTGTaGGGGGCGCCATTGTGCACC +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRKRAHL*GAPLCT
Trigger: GGTGCACAATGGCGCCCCCCACAGGTGTGCTCTCTT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGACATCTCCAGCTGCTaGACTCTGGCCATCCCGGAT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASDISSC*TLAIPD
Trigger: ATCCGGGATGGCCAGAGTCCAGCAGCTGGAGATGTC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGACATCTCCAGCTGCTaGACTCTGGCCATCCCGGAT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPDISSC*TLAIPD
Trigger: ATCCGGGATGGCCAGAGTCCAGCAGCTGGAGATGTC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGCTGCACTTCCACAGTaGCAGTGTCTGTGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASAALPQ*QCLCPR
Trigger: CCTCGGACACAGACACTGCCACTGTGGAAGTGCAGC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGTGCTGAGATCCGAGTaGGCCCGAATCTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASVLRSE*ARIFWT
Trigger: GGTCCAGAAGATTCGGGCCCACTCGGATCTCAGCAC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGTGCTGAGATCCGAGTaGGCCCGAATCTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPVLRSE*ARIFWT
Trigger: GGTCCAGAAGATTCGGGCCCACTCGGATCTCAGCAC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCTCGGCCAGGCGCTCTaGGAAGTAGATACCGTACCT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPLGQAL*EVDTVP
Trigger: AGGTACGGTATCTACTTCCCAGAGCGCCTGGCCGAG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCTCTCACCTCCGGCAGTaGCAGCGAGCGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRSHLRQ*QRAPPP
Trigger: CGGCGGCGGCGCTCGCTGTCACTGCCGGAGGTGAGA...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTACGACAGGGAAGGTGTaGGACACCCGCATGATTCTG +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASTTGKV*DTRMIL
Trigger: CAGAATCATGCGGGTGTCTCACACCTTCCCTGTCGT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGAGCTGTGCAGGCCTCTaGACAGGCCGGAGCACAAAA +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQSCAGL*TGRSTK
Trigger: TTTTGTGCTCCGGCCTGTTCAGAGGCCTGCACAGCT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAGGTCAAGTCCTTTCTaGTATCCTCAGGTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLRSSPF*YPQVSP
Trigger: GGGACTCACCTGAGGATATCAGAAAGGACTTGACCT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGTTTCTCCACGGTGACTaGGCTGAGCTCCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQFLHGD*AELQAC
Trigger: GCAAGCCTGGAGCTCAGCTCAGTCACCGTGGAGAAA...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATCTTCACAGCCACAGTaGGGGTGGACGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTSSQPQ*GWTCCS
Trigger: TGAGCAGCACGTCCACCCTCACTGTGGCTGTGAAGA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGTCTTCACAGCCACAGTaGGGGTGGACGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQSSQPQ*GWTCCS
Trigger: TGAGCAGCACGTCCACCCTCACTGTGGCTGTGAAGA...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGGTCAGAGCCATCGATaGCATCTCCAGCTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTGQSHR*HLQLLD
Trigger: GTCCAGCAGCTGGAGATGTCATCGATGGCTCTGACC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGGTCAGAGCCATCGATaGCATCTCCAGCTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFGQSHR*HLQLLD
Trigger: GTCCAGCAGCTGGAGATGTCATCGATGGCTCTGACC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGCCCCCTGACTGTCGGTaGCTCGCAAGTGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQPPDCR*LASGKC
Trigger: ACACTTTCCACTTGCGAGTCACCGACAGTCAGGGGG...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGACCCCCTGACTGTCGGTaGCTCGCAAGTGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRPPDCR*LASGKC
Trigger: ACACTTTCCACTTGCGAGTCACCGACAGTCAGGGGG...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGATGGGGAACTACCCTaGACCAGTCAACGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASDGELP*TSQRSR
Trigger: CCTGCTACGTTGACTGGTTCAGGGTAGTTCCCCATC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGATGGGGAACTACCCTaGACCAGTCAACGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQDGELP*TSQRSR
Trigger: CCTGCTACGTTGACTGGTTCAGGGTAGTTCCCCATC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTATGTCCTCCCCTCGCTaGACTGCTTACGGGCACAAC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFMSSPR*TAYGHN
Trigger: GTTGTGCCCGTAAGCAGTGCAGCGAGGGGAGGACAT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCACAGCAAGCGGCCGTaGAGTCTACGACAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACHSKRP*SLRQGR
Trigger: CCTTCCCTGTCGTAGACTGCACGGCCGCTTGCTGTG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCTCCCTCTGGGCTCCTaGTTGCCACTGGGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACLPLGS*LPLGCK
Trigger: CTTGCAACCCAGTGGCAAGCAGGAGCCCAGAGGGAG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGCTGAGCTCCAGGCTTaGCGGAGGAAGACTATGGGA +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTAELQA*RRKTMG
Trigger: TCCCATAGTCTTCCTCCGGCAAGCCTGGAGCTCAGC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGCTGAGCTCCAGGCTTaGCGGAGGAAGACTATGGGA +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFAELQA*RRKTMG
Trigger: TCCCATAGTCTTCCTCCGGCAAGCCTGGAGCTCAGC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGGCGTCTGTACTCCCTaGATGACCACATGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASGVCTP*MTTCLP
Trigger: GGGCAAACATGTGGTCATGCAGGGAGTACAGACGCC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGATGACATCTCCAGCTaGTGGACTCTGGCCATCCCG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQDDISS*WTLAIP
Trigger: CGGGATGGCCAGAGTCCAGCAGCTGGAGATGTCATC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGACCAGATTCGTAAGCTaGAGAGCCACACTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLTRFVS*RATLWS
Trigger: TGACCACAGTGTGGCTCTGCAGCTTACGAATCTGGT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTTCCTAGGGTCTGGCTaGACTTCCACAGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPFLGSG*TSTVAV
Trigger: CACTGCCACTGTGGAAGTGCAGCCAGACCCTAGGAA...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTTGCCCAACACCAACCTaGAGGGTCAGCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACCPTPT*RVSSTR
Trigger: CCTGGTGGAGCTGACCCTGCAGGTTGGTGTTGGGCA...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAAGGGTGTCCTTCCGCTaGTCTGTCAGCTGCCCAACA +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRRVSFR*SVSCPT
Trigger: TGTTGGGCAGCTGACAGAGCAGCGGAAGGACACCCT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAAGGGTGTCCTTCCGCTaGTCTGTCAGCTGCCCAACA +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTRVSFR*SVSCPT
Trigger: TGTTGGGCAGCTGACAGAGCAGCGGAAGGACACCCT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGAGGGCTTGGCACTGTaGGAGTGTTGCCGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACEGLAL*ECCRQH
Trigger: GTGCTGACGGCAACACTCGCACAGTGCCAAGCCCTC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGGCCTGCCTACTGGCTaGCCTCTTTCCTATTTCTCG +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASGLPTG*PLSYFS
Trigger: CGAGAAATAGGAAAGAGGGCAGCCAGTAGGCAGGCC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCCAGAGGAGCGAATCTaGACCAAGCCCAAGACAGGC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFPEERI*TKPKTG
Trigger: GCCTGTCTTGGGCTTGGTCCAGATTCGCTCCTCTGG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGCTCCTGCTTGCCACTaGGTTGCAAGAGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQAPACH*VARGPS
Trigger: AGAAGGACCTCTTGCAACCCAGTGGCAAGCAGGAGC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTTCTACAGGTGGCGCTaGCGCAACAAAGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASFYRWR*RNKGLQ
Trigger: CTGAAGGCCTTTGTTGCGCCAGCGCCACCTGTAGAA...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAACAACTGCTACAGGTaGCAGGTTGACTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLNNCYR*QVDSSG
Trigger: GCCAGAAGAGTCAACCTGCCACCTGTAGCAGTTGTT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGCCGGCCACAGCCACTaGAGGTCTATTGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPAGHSH*RSIVFR
Trigger: CCTGAAAACAATAGACCTCCAGTGGCTGTGGCCGGC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAGACATCTCCAGCTGCTaGACTCTGGCCATCCCGGAT +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRDISSC*TLAIPD
Trigger: ATCCGGGATGGCCAGAGTCCAGCAGCTGGAGATGTC...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATCGGTGACTCGCAAGTaGAAAGTGTACACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQSVTRK*KVYTPS
Trigger: GGAGGGGGTGTACACTTTCCACTTGCGAGTCACCGA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAGCTGCACTTCCACAGTaGCAGTGTCTGTGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRAALPQ*QCLCPR
Trigger: CCTCGGACACAGACACTGCCACTGTGGAAGTGCAGC...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGCTGCACTTCCACAGTaGCAGTGTCTGTGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQAALPQ*QCLCPR
Trigger: CCTCGGACACAGACACTGCCACTGTGGAAGTGCAGC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTACTCTTCCTAGGGTCTaGCTGCACTTCCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASTLPRV*LHFHSG
Trigger: GCCACTGTGGAAGTGCAGCCAGACCCTAGGAAGAGT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAACTCTTCCTAGGGTCTaGCTGCACTTCCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQTLPRV*LHFHSG
Trigger: GCCACTGTGGAAGTGCAGCCAGACCCTAGGAAGAGT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGTGCTGAGATCCGAGTaGGCCCGAATCTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTVLRSE*ARIFWT
Trigger: GGTCCAGAAGATTCGGGCCCACTCGGATCTCAGCAC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACCGTACCTCCACAGATaGCCCGTGCCTCTTAGACAA +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQPYLHR*PVPLRQ
Trigger: TTGTCTAAGAGGCACGGGCCATCTGTGGAGGTACGG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTAAAACCAGGAGGGCTTaGCACTGTGCGAGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASKTRRA*HCASVA
Trigger: GGCAACACTCGCACAGTGCCAAGCCCTCCTGGTTTT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAAAAACCAGGAGGGCTTaGCACTGTGCGAGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQKTRRA*HCASVA
Trigger: GGCAACACTCGCACAGTGCCAAGCCCTCCTGGTTTT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTAGGACCAAGGGTGGATaGGGAACTACCCTGAACCAG +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASRTKGG*GTTLNQ
Trigger: CTGGTTCAGGGTAGTTCCCCATCCACCCTTGGTCCT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCCTCAGGACCAAGGGTaGATGGGGAACTACCCTGAA +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPPQDQG*MGNYPE
Trigger: TTCAGGGTAGTTCCCCATCCACCCTTGGTCCTGAGG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR CAA 72 bp TGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTaGCTACATGCAAGACTCCGTACCTCCACAGATGGC +
Preference number: 4 (lower is better)
Translates to: WHCASVAVSTES*LHARLRTSTDG
Trigger: GCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGACGACAGGGAAGGTGTaGGACACCCGCATGATTCTG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQTTGKV*DTRMIL
Trigger: CAGAATCATGCGGGTGTCTCACACCTTCCCTGTCGT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAACGACAGGGAAGGTGTaGGACACCCGCATGATTCTG +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTTTGKV*DTRMIL
Trigger: CAGAATCATGCGGGTGTCTCACACCTTCCCTGTCGT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCTCCCGGTAGTCATCTaGGTACTCAGACATCTCCTC +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPLPVVI*VLRHLL
Trigger: GAGGAGATGTCTGAGTACTCAGATGACTACCGGGAG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGCCATCAATGAGGGCTaGCGTCAAAGGCAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPAINEG*RQRQSE
Trigger: CTCACTTTGCCTTTGACGTCAGCCCTCATTGATGGC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGTCAGCCTTCTCCTTTaGGAGCCGCATGTGCAGATT +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQVSLLL*EPHVQI
Trigger: AATCTGCACATGCGGCTCTCAAAGGAGAAGGCTGAC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGTGCTTGTTAGCCTGTaGGCCCTACAAACACCCACT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPVLVSL*ALQTPT
Trigger: AGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCAC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGTGCTTGTTAGCCTGTaGGCCCTACAAACACCCACT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASVLVSL*ALQTPT
Trigger: AGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCAC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGTGCTTGTTAGCCTGTaGGCCCTACAAACACCCACT +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQVLVSL*ALQTPT
Trigger: AGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCAC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTATGTCCTCCCCTCGCTaGACTGCTTACGGGCACAAC +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACMSSPR*TAYGHN
Trigger: GTTGTGCCCGTAAGCAGTGCAGCGAGGGGAGGACAT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATGCTTGCCACTGGGTTaGAAGAGGTCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRCLPLG*KRSFSS
Trigger: GCTGGAGAAGGACCTCTTGCAACCCAGTGGCAAGCA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATGCTTGCCACTGGGTTaGAAGAGGTCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTCLPLG*KRSFSS
Trigger: GCTGGAGAAGGACCTCTTGCAACCCAGTGGCAAGCA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCTCTGGGCTCCTGCTTaGCACTGGGTTGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACLWAPA*HWVARG
Trigger: ACCTCTTGCAACCCAGTGGCAAGCAGGAGCCCAGAG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGCTGAGCTCCAGGCTTaGCGGAGGAAGACTATGGGA +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACAELQA*RRKTMG
Trigger: TCCCATAGTCTTCCTCCGGCAAGCCTGGAGCTCAGC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGGCGTCTGTACTCCCTaGATGACCACATGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFGVCTP*MTTCLP
Trigger: GGGCAAACATGTGGTCATGCAGGGAGTACAGACGCC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAAGTGGTAGAAGACAATaGCGTGGTCATCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQSGRRQ*RGHRCC
Trigger: GCAGCAGCGATGACCACGGCATTGTCTTCTACCACT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGATGACATCTCCAGCTaGTGGACTCTGGCCATCCCG +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACDDISS*WTLAIP
Trigger: CGGGATGGCCAGAGTCCAGCAGCTGGAGATGTCATC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATTCCTAGGGTCTGGCTaGACTTCCACAGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRFLGSG*TSTVAV
Trigger: CACTGCCACTGTGGAAGTGCAGCCAGACCCTAGGAA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATTCCTAGGGTCTGGCTaGACTTCCACAGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTFLGSG*TSTVAV
Trigger: CACTGCCACTGTGGAAGTGCAGCCAGACCCTAGGAA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAGGGTGTCCTTCCGCTaGTCTGTCAGCTGCCCAACA +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACRVSFR*SVSCPT
Trigger: TGTTGGGCAGCTGACAGAGCAGCGGAAGGACACCCT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGTGCTCTGTGCTTCGGTaGTTGATACCATATTTGGGC +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLCSVLR*LIPYLG
Trigger: GCCCAAATATGGTATCAAGCACCGAAGCACAGAGCA...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGACACAGCCATCTGACTaGAGGTCCTACAAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLTQPSD*RSYKRN
Trigger: GTTTCTCTTGTAGGACCTGCAGTCAGATGGCTGTGT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGCACTGTGCGAGTGTTaGCGTCAGCACAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPALCEC*RQHRKL
Trigger: AAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGATTGCTCGGGAGTACTaGTTTGTGGGTGGGAATGTT +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLIAREY*FVGGNV
Trigger: AACATTCCCACCCACAAAGCAGTACTCCCGAGCAAT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGGCTGCTGTCCCCTATaGCAGAAATTCACATTTGCA +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLGCCPL*QKFTFA
Trigger: TGCAAATGTGAATTTCTGGCATAGGGGACAGCAGCC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTATCCACAGGAGACTATaGAGGCCATCTCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASIHRRL*RPSLPL
Trigger: CAGAGGGAGAGATGGCCTGCATAGTCTCCTGTGGAT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCCAGAGCTCTTAGCGTaGTTTATCTCCCAAAGATCC +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLPELLA*FISQRS
Trigger: GGATCTTTGGGAGATAAAGCACGCTAAGAGCTCTGG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCCAGAGGAGCGAATCTaGACCAAGCCCAAGACAGGC +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACPEERI*TKPKTG
Trigger: GCCTGTCTTGGGCTTGGTCCAGATTCGCTCCTCTGG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGCTCCTGCTTGCCACTaGGTTGCAAGAGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTAPACH*VARGPS
Trigger: AGAAGGACCTCTTGCAACCCAGTGGCAAGCAGGAGC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGCTAGTGGGAGGTGTTaGGATGCTGTGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQASGRC*DAVLCT
Trigger: AGTACAGAGCACAGCATCCCAACACCTCCCACTAGC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGTTCTACAGGTGGCGCTaGCGCAACAAAGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQFYRWR*RNKGLQ
Trigger: CTGAAGGCCTTTGTTGCGCCAGCGCCACCTGTAGAA...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGGTTGTTTCTACAGGTaGCGCTGGCGCAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFGCFYR*RWRNKG
Trigger: GCCTTTGTTGCGCCAGCGCCACCTGTAGAAACAACC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGCCGGCCACAGCCACTaGAGGTCTATTGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQAGHSH*RSIVFR
Trigger: CCTGAAAACAATAGACCTCCAGTGGCTGTGGCCGGC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTCTGCTCAGTCCCTGCTaGTCTTTCACTGTCAAACGG +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASLLSPC*SFTVKR
Trigger: CCGTTTGACAGTGAAAGACCAGCAGGGACTGAGCAG...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACTGCTCAGTCCCTGCTaGTCTTTCACTGTCAAACGG +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQLLSPC*SFTVKR
Trigger: CCGTTTGACAGTGAAAGACCAGCAGGGACTGAGCAG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCAGAGCCACACTGTaGTCAGAGCCATCGATGACA +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPCRATL*SEPSMT
Trigger: TGTCATCGATGGCTCTGACCACAGTGTGGCTCTGCA...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGTCGGTGACTCGCAAGTaGAAAGTGTACACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQSVTRK*KVYTPS
Trigger: GGAGGGGGTGTACACTTTCCACTTGCGAGTCACCGA...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGTGCTGAGATCCGAGTaGGCCCGAATCTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACVLRSE*ARIFWT
Trigger: GGTCCAGAAGATTCGGGCCCACTCGGATCTCAGCAC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCGGATACCATCAGGCTaGAGTTGTGCTCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPRIPSG*SCALCF
Trigger: GAAGCACAGAGCACAACTCCAGCCTGATGGTATCCG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACCCACTGACTGGTCTTaGATTCAAGGGGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQPTDWS*IQGVLP
Trigger: TGGAAGGACCCCTTGAATCCAAGACCAGTCAGTGGG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGCCGTACCTCCACAGATaGCCCGTGCCTCTTAGACAA +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQPYLHR*PVPLRQ
Trigger: TTGTCTAAGAGGCACGGGCCATCTGTGGAGGTACGG...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTAGGACCAAGGGTGGATaGGGAACTACCCTGAACCAG +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFRTKGG*GTTLNQ
Trigger: CTGGTTCAGGGTAGTTCCCCATCCACCCTTGGTCCT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAAGGACCAAGGGTGGATaGGGAACTACCCTGAACCAG +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRRTKGG*GTTLNQ
Trigger: CTGGTTCAGGGTAGTTCCCCATCCACCCTTGGTCCT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCCCGCGCACAAAAGGTaGCATCACTGGCTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFPAHKR*HHWLVE
Trigger: CTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGCCCGCGCACAAAAGGTaGCATCACTGGCTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQPAHKR*HHWLVE
Trigger: CTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGG...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAACTTTTGTTGGGTATTaGCCTGCCTACTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQTFVGY*PAYWLP
Trigger: GGGCAGCCAGTAGGCAGGCCAATACCCAACAAAAGT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTGTGAGACACCCGCATaGTTCTGGTGGTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASCETPA*FWWFPS
Trigger: ACTTGGAAACCACCAGAATCATGCGGGTGTCTCACA...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGTGAGACACCCGCATaGTTCTGGTGGTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPCETPA*FWWFPS
Trigger: ACTTGGAAACCACCAGAATCATGCGGGTGTCTCACA...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGACTCCCGGTAGTCATCTaGGTACTCAGACATCTCCTC +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRLPVVI*VLRHLL
Trigger: GAGGAGATGTCTGAGTACTCAGATGACTACCGGGAG...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGCCATCAATGAGGGCTaGCGTCAAAGGCAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQAINEG*RQRQSE
Trigger: CTCACTTTGCCTTTGACGTCAGCCCTCATTGATGGC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGCCATCAATGAGGGCTaGCGTCAAAGGCAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFAINEG*RQRQSE
Trigger: CTCACTTTGCCTTTGACGTCAGCCCTCATTGATGGC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATTTGGCTGCCATCAATaGGGGCTGACGTCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRFGCHQ*GLTSKA
Trigger: TGCCTTTGACGTCAGCCCTCATTGATGGCAGCCAAA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATTTGGCTGCCATCAATaGGGGCTGACGTCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTFGCHQ*GLTSKA
Trigger: TGCCTTTGACGTCAGCCCTCATTGATGGCAGCCAAA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGTTTGGCTGCCATCAATaGGGGCTGACGTCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQFGCHQ*GLTSKA
Trigger: TGCCTTTGACGTCAGCCCTCATTGATGGCAGCCAAA...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGGCAAAGTTATGGTGTaGTTTGGTCCTGCATTAGCA +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLGKVMV*FGPALA
Trigger: TGCTAATGCAGGACCAAATCACACCATAACTTTGCC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGTCTGTACTCCCTGCATaGCCACATGTTTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQSVLPA*PHVCPH
Trigger: GTGAGGGCAAACATGTGGTCATGCAGGGAGTACAGA...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTCCATCTTTTCTCGGCTaGAGATTGTGTCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASPSFLG*RLCPGH
Trigger: GTGACCAGGACACAATCTTCAGCCGAGAAAAGATGG...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCCTTCCACTTTACAATaGACTGCGCCATTATCTGTC +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLPSTLQ*TAPLSV
Trigger: GACAGATAATGGCGCAGTTCATTGTAAAGTGGAAGG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGATGGGGAACTACCCTaGACCAGTCAACGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACDGELP*TSQRSR
Trigger: CCTGCTACGTTGACTGGTTCAGGGTAGTTCCCCATC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCCTCATTACGCCCGATaGCTTTACATTTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPPHYAR*LYIWAA
Trigger: AGCAGCCCAAATGTAAAGTCATCGGGCGTAATGAGG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGCATCACTGGCTTGTTaGGTGGTACATTTTCTTACC +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLASLAC*VVHFLT
Trigger: GGTAAGAAAATGTACCACTCAACAAGCCAGTGATGC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTACGGGCACAACCTTCTaGACTCAGGGCGTCTCGATT +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACTGTTF*TQGVSI
Trigger: AATCGAGACGCCCTGAGTTCAGAAGGTTGTGCCCGT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATTGGGGAGAAACAACTaGTACAGGTGGCAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQLGRNN*YRWQVD
Trigger: GTCAACCTGCCACCTGTAGCAGTTGTTTCTCCCCAA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGAGTGGTAGAAGACAATaGCGTGGTCATCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQSGRRQ*RGHRCC
Trigger: GCAGCAGCGATGACCACGGCATTGTCTTCTACCACT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAAGTGGTAGAAGACAATaGCGTGGTCATCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTSGRRQ*RGHRCC
Trigger: GCAGCAGCGATGACCACGGCATTGTCTTCTACCACT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAAGTGGTAGAAGACAATaGCGTGGTCATCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRSGRRQ*RGHRCC
Trigger: GCAGCAGCGATGACCACGGCATTGTCTTCTACCACT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTTTCCTAGGGTCTGGCTaGACTTCCACAGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACFLGSG*TSTVAV
Trigger: CACTGCCACTGTGGAAGTGCAGCCAGACCCTAGGAA...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAATCAGGCTGGAGTTGTaGTCTGTGCTTCGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRIRLEL*SVLRCL
Trigger: CAAGCACCGAAGCACAGAGCACAACTCCAGCCTGAT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGCACTGTGCGAGTGTTaGCGTCAGCACAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQALCEC*RQHRKL
Trigger: AAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTATCCACAGGAGACTATaGAGGCCATCTCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFIHRRL*RPSLPL
Trigger: CAGAGGGAGAGATGGCCTGCATAGTCTCCTGTGGAT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGTCCACCATGAAGAATaGTGGTTGGTCATTCCATCT +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLVHHEE*WLVIPS
Trigger: AGATGGAATGACCAACCAGCATTCTTCATGGTGGAC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTGCTCTGTGCTTCGGTaGTTGATACCACAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASCSVLR*LIPQLL
Trigger: GAGCAACTGTGGTATCAAGCACCGAAGCACAGAGCA...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537886.5
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTTCCAGAGCTGTTGCTaGATTGTTCCTGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASFQSCC*IVPGAE
Trigger: CTCAGCTCCAGGAACAATCCAGCAACAGCTCTGGAA...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGCCGGAGGAAGACTATaGGAAGGCATTAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPAGGRL*EGIRTS
Trigger: AGAGGTTCTAATGCCTTCCCATAGTCTTCCTCCGGC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAGCTAGTGGGAGGTGTTaGGATGCTGTGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRASGRC*DAVLCT
Trigger: AGTACAGAGCACAGCATCCCAACACCTCCCACTAGC...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCACCTTGGTAGTCTGTaGGGTGGCTTATTAAATTCC +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLHLGSL*GGLLNS
Trigger: GGAATTTAATAAGCCACCCCACAGACTACCAAGGTG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTAACAACTGCTACAGGTaGCAGGTTGACTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASNNCYR*QVDSSG
Trigger: GCCAGAAGAGTCAACCTGCCACCTGTAGCAGTTGTT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGCCGGCCACAGCCACTaGAGGTCTATTGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACAGHSH*RSIVFR
Trigger: CCTGAAAACAATAGACCTCCAGTGGCTGTGGCCGGC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACTGCTCAGTCCCTGCTaGTCTTTCACTGTCAAACGG +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTLLSPC*SFTVKR
Trigger: CCGTTTGACAGTGAAAGACCAGCAGGGACTGAGCAG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACACCAGCCCGGGCTCTaGGAGGACTATTATTTTCCT +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTHQPGL*EDYYFP
Trigger: AGGAAAATAATAGTCCTCCCAGAGCCCGGGCTGGTG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGACACCAGCCCGGGCTCTaGGAGGACTATTATTTTCCT +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRHQPGL*EDYYFP
Trigger: AGGAAAATAATAGTCCTCCCAGAGCCCGGGCTGGTG...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATGCAGAGCCACACTGTaGTCAGAGCCATCGATGACA +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTCRATL*SEPSMT
Trigger: TGTCATCGATGGCTCTGACCACAGTGTGGCTCTGCA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGTGCAGAGCCACACTGTaGTCAGAGCCATCGATGACA +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQCRATL*SEPSMT
Trigger: TGTCATCGATGGCTCTGACCACAGTGTGGCTCTGCA...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATGGGCCCGAATCTTCTaGACCTTAATGTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRWARIF*TLMSES
Trigger: GGACTCGGACATTAAGGTCCAGAAGATTCGGGCCCA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTTGGGCCCGAATCTTCTaGACCTTAATGTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFWARIF*TLMSES
Trigger: GGACTCGGACATTAAGGTCCAGAAGATTCGGGCCCA...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCGGATACCATCAGGCTaGAGTTGTGCTCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFRIPSG*SCALCF
Trigger: GAAGCACAGAGCACAACTCCAGCCTGATGGTATCCG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACGGATACCATCAGGCTaGAGTTGTGCTCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTRIPSG*SCALCF
Trigger: GAAGCACAGAGCACAACTCCAGCCTGATGGTATCCG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCCCACTGACTGGTCTTaGATTCAAGGGGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFPTDWS*IQGVLP
Trigger: TGGAAGGACCCCTTGAATCCAAGACCAGTCAGTGGG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGTAACTCCCACTGACTaGTCTTGGATTCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPVTPTD*SWIQGV
Trigger: GACCCCTTGAATCCAAGACCAGTCAGTGGGAGTTAC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAAAACCAGGAGGGCTTaGCACTGTGCGAGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACKTRRA*HCASVA
Trigger: GGCAACACTCGCACAGTGCCAAGCCCTCCTGGTTTT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGGGAAACATTTTCTCTaGCACTCCTGCCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQGKHFL*HSCPGV
Trigger: AACACCAGGGCAGGAGTGCCAGAGAAAATGTTTCCC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCGATTCTACTTTTGTTaGGTATTGGCCTGCCTACTG +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLRFYFC*VLACLL
Trigger: CAGTAGGCAGGCCAATACCCAACAAAAGTAGAATCG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS-3UTR TCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTTGTGAGACACCCGCATaGTTCTGGTGGTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFCETPA*FWWFPS
Trigger: ACTTGGAAACCACCAGAATCATGCGGGTGTCTCACA...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAAGGTCAAGTCCTTTCTaGTATCCTCAGGTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTRSSPF*YPQVSP
Trigger: GGGACTCACCTGAGGATATCAGAAAGGACTTGACCT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCTCCAACAGAGGAGTTaGAGGCCCCCTCGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRLQQRS*RPPRCP
Trigger: CGGGCAGCGAGGGGGCCTTCAACTCCTCTGTTGGAG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGATTGTTCCTGGAGCTaGGAAGCCTTTTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASDCSWS*EAFSFS
Trigger: GGAGAAAGAAAAGGCTTCTCAGCTCCAGGAACAATC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTTTTGGCTGCCATCAATaGGGGCTGACGTCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACFGCHQ*GLTSKA
Trigger: TGCCTTTGACGTCAGCCCTCATTGATGGCAGCCAAA...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGTCATCAGTAGACCTTaGACCATCCAAAGTAATGGA +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLVISRP*TIQSNG
Trigger: TCCATTACTTTGGATGGTTCAAGGTCTACTGATGAC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGTGTCCGAGGCCCCCTaGCTGTCGGTGACTCGCAAG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRVSEAP*LSVTRK
Trigger: CTTGCGAGTCACCGACAGTCAGGGGGCCTCGGACAC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACAACCCTCAAGACCTTaGAAAGCAAGAAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQQPSRP*KARSQP
Trigger: AGGCTGACTTCTTGCTTTTCAAGGTCTTGAGGGTTG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGCCATCTTTTCTCGGCTaGAGATTGTGTCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQPSFLG*RLCPGH
Trigger: GTGACCAGGACACAATCTTCAGCCGAGAAAAGATGG...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACCTCATTACGCCCGATaGCTTTACATTTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTPHYAR*LYIWAA
Trigger: AGCAGCCCAAATGTAAAGTCATCGGGCGTAATGAGG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTTCAAGATCCTTCTGTaGTGGAAGGATCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPFKILL*WKDQRG
Trigger: GCCTCTCTGATCCTTCCATCACAGAAGGATCTTGAA...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATTCAAGATCCTTCTGTaGTGGAAGGATCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQFKILL*WKDQRG
Trigger: GCCTCTCTGATCCTTCCATCACAGAAGGATCTTGAA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACTAGGCCCCAATCTTTaGCTAGAAAGGTCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQLGPNL*LERSSP
Trigger: AGGACTTGACCTTTCTAGGCAAAGATTGGGGCCTAG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTCTAGGCCCCAATCTTTaGCTAGAAAGGTCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASLGPNL*LERSSP
Trigger: AGGACTTGACCTTTCTAGGCAAAGATTGGGGCCTAG...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACTTTTCCAGAGCTGTTaGTGGATTGTTCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQLFQSC*WIVPGA
Trigger: AGCTCCAGGAACAATCCAGCAACAGCTCTGGAAAAG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTCTTTTCCAGAGCTGTTaGTGGATTGTTCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASLFQSC*WIVPGA
Trigger: AGCTCCAGGAACAATCCAGCAACAGCTCTGGAAAAG...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATTGGGGAGAAACAACTaGTACAGGTGGCAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTLGRNN*YRWQVD
Trigger: GTCAACCTGCCACCTGTAGCAGTTGTTTCTCCCCAA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGGCAAAGTGAGCTCTTaGAGTTGGGGAGAAACAACT +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQGKVSS*SWGETT
Trigger: AGTTGTTTCTCCCCAACTGCAAGAGCTCACTTTGCC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGGCAAAGTGAGCTCTTaGAGTTGGGGAGAAACAACT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPGKVSS*SWGETT
Trigger: AGTTGTTTCTCCCCAACTGCAAGAGCTCACTTTGCC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGGTGTGATTTGGTCCTaGATTAGCAACTGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASGVIWS*ISNWWV
Trigger: TACCCACCAGTTGCTAATGCAGGACCAAATCACACC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGGTGTGATTTGGTCCTaGATTAGCAACTGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPGVIWS*ISNWWV
Trigger: TACCCACCAGTTGCTAATGCAGGACCAAATCACACC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGACCAGATTCGTAAGCTaGAGAGCCACACTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQTRFVS*RATLWS
Trigger: TGACCACAGTGTGGCTCTGCAGCTTACGAATCTGGT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTACCAGATTCGTAAGCTaGAGAGCCACACTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFTRFVS*RATLWS
Trigger: TGACCACAGTGTGGCTCTGCAGCTTACGAATCTGGT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAACCAGATTCGTAAGCTaGAGAGCCACACTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTTRFVS*RATLWS
Trigger: TGACCACAGTGTGGCTCTGCAGCTTACGAATCTGGT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCTTCAGAAGGCAACCTaGTGTATCAACCCTCAAGAC +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPLQKAT*CINPQD
Trigger: GTCTTGAGGGTTGATACAGCAGGTTGCCTTCTGAAG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTATCAGGCTGGAGTTGTaGTCTGTGCTTCGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACIRLEL*SVLRCL
Trigger: CAAGCACCGAAGCACAGAGCACAACTCCAGCCTGAT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGACACAGCCATCTGACTaGAGGTCCTACAAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPTQPSD*RSYKRN
Trigger: GTTTCTCTTGTAGGACCTGCAGTCAGATGGCTGTGT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAACACAGCCATCTGACTaGAGGTCCTACAAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQTQPSD*RSYKRN
Trigger: GTTTCTCTTGTAGGACCTGCAGTCAGATGGCTGTGT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAAGAAAGCTTGCTACATaGAAGACTCCGTACCTCCAC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQRKLAT*KTPYLH
Trigger: GTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAATTGCTCGGGAGTACTaGTTTGTGGGTGGGAATGTT +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQIAREY*FVGGNV
Trigger: AACATTCCCACCCACAAAGCAGTACTCCCGAGCAAT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACCAGAGCTCTTAGCGTaGTTTATCTCCCAAAGATCC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQPELLA*FISQRS
Trigger: GGATCTTTGGGAGATAAAGCACGCTAAGAGCTCTGG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTCCAGAGCTCTTAGCGTaGTTTATCTCCCAAAGATCC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASPELLA*FISQRS
Trigger: GGATCTTTGGGAGATAAAGCACGCTAAGAGCTCTGG...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGAACCAGCAACTAAAGTaGTTGTTAGCCTGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPNQQLK*LLACEP
Trigger: GGGCTCACAGGCTAACAAGCACTTTAGTTGCTGGTT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCTGCTGCGTCTCCGCTaGCACCGCAGGACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSLLRLR*HRRTVS
Trigger: GGAGACAGTCCTGCGGTGCCAGCGGAGACGCAGCAG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATTCCAGAGCTGTTGCTaGATTGTTCCTGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRFQSCC*IVPGAE
Trigger: CTCAGCTCCAGGAACAATCCAGCAACAGCTCTGGAA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGCCGGAGGAAGACTATaGGAAGGCATTAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFAGGRL*EGIRTS
Trigger: AGAGGTTCTAATGCCTTCCCATAGTCTTCCTCCGGC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTAACAACTGCTACAGGTaGCAGGTTGACTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFNNCYR*QVDSSG
Trigger: GCCAGAAGAGTCAACCTGCCACCTGTAGCAGTTGTT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTCCTGCATTAGCAACTaGTGGGTAGTCCACAGCATT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPSCISN*WVVHSI
Trigger: AATGCTGTGGACTACCCACCAGTTGCTAATGCAGGA...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAGTTATGGTGTGATTTaGTCCTGCATTAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLSYGVI*SCISNW
Trigger: CCAGTTGCTAATGCAGGACCAAATCACACCATAACT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTTGCAGAGCCACACTGTaGTCAGAGCCATCGATGACA +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACCRATL*SEPSMT
Trigger: TGTCATCGATGGCTCTGACCACAGTGTGGCTCTGCA...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTTGGGCCCGAATCTTCTaGACCTTAATGTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACWARIF*TLMSES
Trigger: GGACTCGGACATTAAGGTCCAGAAGATTCGGGCCCA...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCGGATACCATCAGGCTaGAGTTGTGCTCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACRIPSG*SCALCF
Trigger: GAAGCACAGAGCACAACTCCAGCCTGATGGTATCCG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAGTAACTCCCACTGACTaGTCTTGGATTCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRVTPTD*SWIQGV
Trigger: GACCCCTTGAATCCAAGACCAGTCAGTGGGAGTTAC...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGCGTTATCCCTATCTATaGCAGTCCAAACGCACAGCC +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQRYPYL*QSKRTA
Trigger: GGCTGTGCGTTTGGACTGCCATAGATAGGGATAACG...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGAGGTGTGCTCACACTTaGTACCACAACACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPRCAHT*YHNTGS
Trigger: AGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTCTGGCACTCCTGCCCTaGTGTTTAAATACCTTGCTT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASLALLP*CLNTLL
Trigger: AAGCAAGGTATTTAAACACCAGGGCAGGAGTGCCAG...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACTGGCACTCCTGCCCTaGTGTTTAAATACCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQLALLP*CLNTLL
Trigger: AAGCAAGGTATTTAAACACCAGGGCAGGAGTGCCAG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGGGAAACATTTTCTCTaGCACTCCTGCCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTGKHFL*HSCPGV
Trigger: AACACCAGGGCAGGAGTGCCAGAGAAAATGTTTCCC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGGGAAACATTTTCTCTaGCACTCCTGCCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQGKHFL*HSCPGV
Trigger: AACACCAGGGCAGGAGTGCCAGAGAAAATGTTTCCC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAATAGAACTTTCAGGTaGCCCAAAAGTTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLNRTFR*PKSSTR
Trigger: TCTGGTGGAACTTTTGGGCCACCTGAAAGTTCTATT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAGGTCAAGTCCTTTCTaGTATCCTCAGGTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACRSSPF*YPQVSP
Trigger: GGGACTCACCTGAGGATATCAGAAAGGACTTGACCT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGATTGTTCCTGGAGCTaGGAAGCCTTTTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTDCSWS*EAFSFS
Trigger: GGAGAAAGAAAAGGCTTCTCAGCTCCAGGAACAATC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACGGGAGAGTCAACTaGAGTCTTCTCTTCTATGAA +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQDGRVN*SLLFYE
Trigger: TTCATAGAAGAGAAGACTTCAGTTGACTCTCCCGTC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGGCAAAGTTATGGTGTaGTTTGGTCCTGCATTAGCA +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQGKVMV*FGPALA
Trigger: TGCTAATGCAGGACCAAATCACACCATAACTTTGCC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGGTTTCCATTCAAAGTaGTGGAGTTTTGGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQGFHSK*WSFGAK
Trigger: CTTTGCCCCAAAACTCCATCACTTTGAATGGAAACC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTAGTAGACTGTTGCCTTaGAGAATCTGTCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASSRLLP*RICHLQ
Trigger: CTGAAGGTGACAGATTCTTCAAGGCAACAGTCTACT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGACAACCCTCAAGACCTTaGAAAGCAAGAAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRQPSRP*KARSQP
Trigger: AGGCTGACTTCTTGCTTTTCAAGGTCTTGAGGGTTG...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCAACCCTCAAGACCTTaGAAAGCAAGAAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFQPSRP*KARSQP
Trigger: AGGCTGACTTCTTGCTTTTCAAGGTCTTGAGGGTTG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTTCTCCATCCATAAGTaGGAGCAAATGCAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPFSIHK*EQMQRF
Trigger: AAAGCGCTGCATTTGCTCTCACTTATGGATGGAGAA...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGAGATGCAAAGCCAAGTaGAACCTCCTGTTAGCACAA +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPRCKAK*NLLLAQ
Trigger: TTGTGCTAACAGGAGGTTTCACTTGGCTTTGCATCT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCCATCTTTTCTCGGCTaGAGATTGTGTCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACPSFLG*RLCPGH
Trigger: GTGACCAGGACACAATCTTCAGCCGAGAAAAGATGG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTTCTTCCTTAGCTCTTaGATGGCCAACAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPFFLSS*MANSCF
Trigger: AAAGCAGCTGTTGGCCATTCAAGAGCTAAGGAAGAA...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGAATACTGCGGGAGATaGCAAAAGCACCTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASEYCGR*QKHLKA
Trigger: AGCTTTTAGGTGCTTTTGTCATCTCCCGCAGTATTC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGGGGTGGCCCGGGTGTaGTCCACAGGAGACTATGCA +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRGVARV*STGDYA
Trigger: TGCATAGTCTCCTGTGGATCACACCCGGGCCACCCC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATTCAAGATCCTTCTGTaGTGGAAGGATCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRFKILL*WKDQRG
Trigger: GCCTCTCTGATCCTTCCATCACAGAAGGATCTTGAA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTTTCAAGATCCTTCTGTaGTGGAAGGATCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFFKILL*WKDQRG
Trigger: GCCTCTCTGATCCTTCCATCACAGAAGGATCTTGAA...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATTCAAGATCCTTCTGTaGTGGAAGGATCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTFKILL*WKDQRG
Trigger: GCCTCTCTGATCCTTCCATCACAGAAGGATCTTGAA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTATAAGCAGTCCACCATaGAGAATGCTGGTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASISSPP*RMLVGH
Trigger: ATGACCAACCAGCATTCTTCATGGTGGACTGCTTAT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGCATCACTGGCTTGTTaGGTGGTACATTTTCTTACC +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPASLAC*VVHFLT
Trigger: GGTAAGAAAATGTACCACTCAACAAGCCAGTGATGC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAATCTCCTTCCTGCATaGCCACATGTTTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACNLLPA*PHVCPH
Trigger: GTGAGGGCAAACATGTGGTCATGCAGGAAGGAGATT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616673.4
CDS-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACTAGGCCCCAATCTTTaGCTAGAAAGGTCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTLGPNL*LERSSP
Trigger: AGGACTTGACCTTTCTAGGCAAAGATTGGGGCCTAG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACTTTTCCAGAGCTGTTaGTGGATTGTTCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTLFQSC*WIVPGA
Trigger: AGCTCCAGGAACAATCCAGCAACAGCTCTGGAAAAG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGGACTCAGAGGGGGCTaGGCTAGTGGGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRGLRGG*ASGRCW
Trigger: CCAACACCTCCCACTAGCGCAGCCCCCTCTGAGTCC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGGCAAAGTGAGCTCTTaGAGTTGGGGAGAAACAACT +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTGKVSS*SWGETT
Trigger: AGTTGTTTCTCCCCAACTGCAAGAGCTCACTTTGCC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTCTGGTGATCGTCACTaGTCTGGTTTCCATTCAAAG +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASSGDRH*SGFHSK
Trigger: CTTTGAATGGAAACCAGAGCAGTGACGATCACCAGA...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCTTCAGAAGGCAACCTaGTGTATCAACCCTCAAGAC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFLQKAT*CINPQD
Trigger: GTCTTGAGGGTTGATACAGCAGGTTGCCTTCTGAAG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATGCTCTGTGCTTCGGTaGTTGATACCATATTTGGGC +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTCSVLR*LIPYLG
Trigger: GCCCAAATATGGTATCAAGCACCGAAGCACAGAGCA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTTGCTCTGTGCTTCGGTaGTTGATACCATATTTGGGC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFCSVLR*LIPYLG
Trigger: GCCCAAATATGGTATCAAGCACCGAAGCACAGAGCA...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAAACCGTGTTTAGAATaGTGTTCCTTAGAGGCAATC +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLKPCLE*CSLEAI
Trigger: GATTGCCTCTAAGGAACAGCATTCTAAACACGGTTT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGACACAGCCATCTGACTaGAGGTCCTACAAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQTQPSD*RSYKRN
Trigger: GTTTCTCTTGTAGGACCTGCAGTCAGATGGCTGTGT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTTCCACAGATGGCCCGTaGCTCTTAGACAAGCTATTT +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFSTDGP*LLDKLF
Trigger: AAATAGCTTGTCTAAGAGGCACGGGCCATCTGTGGA...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGTCCACAGATGGCCCGTaGCTCTTAGACAAGCTATTT +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQSTDGP*LLDKLF
Trigger: AAATAGCTTGTCTAAGAGGCACGGGCCATCTGTGGA...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATCCACAGATGGCCCGTaGCTCTTAGACAAGCTATTT +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRSTDGP*LLDKLF
Trigger: AAATAGCTTGTCTAAGAGGCACGGGCCATCTGTGGA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTAGAAAGCTTGCTACATaGAAGACTCCGTACCTCCAC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFRKLAT*KTPYLH
Trigger: GTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTATTGCTCGGGAGTACTaGTTTGTGGGTGGGAATGTT +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFIAREY*FVGGNV
Trigger: AACATTCCCACCCACAAAGCAGTACTCCCGAGCAAT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGGCTGCTGTCCCCTATaGCAGAAATTCACATTTGCA +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQGCCPL*QKFTFA
Trigger: TGCAAATGTGAATTTCTGGCATAGGGGACAGCAGCC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGACTTTACATTTGGGCTaGTGTCCCCTATGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPTLHLG*CPLCQK
Trigger: TTTCTGGCATAGGGGACAGCAGCCCAAATGTAAAGT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTAGTTCCACCAGAATTTaGCCTCCATCCATCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFSSTRI*PPSIKA
Trigger: TGCCTTGATGGATGGAGGGCAAATTCTGGTGGAACT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGTCCACCATGAAGAATaGTGGTTGGTCATTCCATCT +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQVHHEE*WLVIPS
Trigger: AGATGGAATGACCAACCAGCATTCTTCATGGTGGAC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGCCAGAGCTCTTAGCGTaGTTTATCTCCCAAAGATCC +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQPELLA*FISQRS
Trigger: GGATCTTTGGGAGATAAAGCACGCTAAGAGCTCTGG...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTAACCAGCAACTAAAGTaGTTGTTAGCCTGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFNQQLK*LLACEP
Trigger: GGGCTCACAGGCTAACAAGCACTTTAGTTGCTGGTT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGCCCTGAAGAGAGTTTaGTGCAAGCTTCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTALKRV*CKLPLM
Trigger: CATCAAAGGAAGCTTGCACCAAACTCTCTTCAGGGC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGCCCTGAAGAGAGTTTaGTGCAAGCTTCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQALKRV*CKLPLM
Trigger: CATCAAAGGAAGCTTGCACCAAACTCTCTTCAGGGC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTTTCCAGAGCTGTTGCTaGATTGTTCCTGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACFQSCC*IVPGAE
Trigger: CTCAGCTCCAGGAACAATCCAGCAACAGCTCTGGAA...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGTAGCTCAGATGGGGTaGACTCAGAGGGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSVAQMG*TQRGLR
Trigger: GCGCAGCCCCCTCTGAGTCCACCCCATCTGAGCTAC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACACCTTGGTAGTCTGTaGGGTGGCTTATTAAATTCC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQHLGSL*GGLLNS
Trigger: GGAATTTAATAAGCCACCCCACAGACTACCAAGGTG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAACAACTGCTACAGGTaGCAGGTTGACTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACNNCYR*QVDSSG
Trigger: GCCAGAAGAGTCAACCTGCCACCTGTAGCAGTTGTT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTGCATTAGCAACTGGTaGGTAGTCCACAGCATTGTT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASCISNW*VVHSIV
Trigger: AACAATGCTGTGGACTACCCACCAGTTGCTAATGCA...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCATTAGCAACTGGTaGGTAGTCCACAGCATTGTT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPCISNW*VVHSIV
Trigger: AACAATGCTGTGGACTACCCACCAGTTGCTAATGCA...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATCCTGCATTAGCAACTaGTGGGTAGTCCACAGCATT +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTSCISN*WVVHSI
Trigger: AATGCTGTGGACTACCCACCAGTTGCTAATGCAGGA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATCCTGCATTAGCAACTaGTGGGTAGTCCACAGCATT +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRSCISN*WVVHSI
Trigger: AATGCTGTGGACTACCCACCAGTTGCTAATGCAGGA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACTGAAGATTGTGTCCTaGTCACTGTCAAACTCAGAC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQLKIVS*SLSNSD
Trigger: GTCTGAGTTTGACAGTGACCAGGACACAATCTTCAG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACGGTCTTTTAGTACGTaGGGATACACATCTAACCCA +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQRSFST*GYTSNP
Trigger: TGGGTTAGATGTGTATCCCCACGTACTAAAAGACCG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCGTTATCCCTATCTATaGCAGTCCAAACGCACAGCC +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACRYPYL*QSKRTA
Trigger: GGCTGTGCGTTTGGACTGCCATAGATAGGGATAACG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGAGGTGTGCTCACACTTaGTACCACAACACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQRCAHT*YHNTGS
Trigger: AGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTTTGCATTCAGTTCTTaGAGCCACTACTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASFAFSS*SHYFLA
Trigger: GGCCAAGAAGTAGTGGCTCCAAGAACTGAATGCAAA...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATTTGCATTCAGTTCTTaGAGCCACTACTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQFAFSS*SHYFLA
Trigger: GGCCAAGAAGTAGTGGCTCCAAGAACTGAATGCAAA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTTTGCATTCAGTTCTTaGAGCCACTACTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPFAFSS*SHYFLA
Trigger: GGCCAAGAAGTAGTGGCTCCAAGAACTGAATGCAAA...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATGTTCTGATGAGAAATaGGGTGACAAGACAGGACTC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQCSDEK*GDKTGL
Trigger: GAGTCCTGTCTTGTCACCCCATTTCTCATCAGAACA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTCACCATGAAGAATGCTaGTTGGTCATTCCATCTCGT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASHHEEC*LVIPSR
Trigger: ACGAGATGGAATGACCAACCAGCATTCTTCATGGTG...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATATTGGCCTGCCTACTaGCTGCCCTCTTTCCTATTT +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTYWPAY*LPSFLF
Trigger: AAATAGGAAAGAGGGCAGCCAGTAGGCAGGCCAATA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCGTTGCTGCTGGCCCTaGGCATCACTCGCCGTCCCA +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLRCCWP*ASLAVP
Trigger: TGGGACGGCGAGTGATGCTCAGGGCCAGCAGCAACG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCTCCAACAGAGGAGTTaGAGGCCCCCTCGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDLQQRS*RPPRCP
Trigger: CGGGCAGCGAGGGGGCCTTCAACTCCTCTGTTGGAG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCTCCAACAGAGGAGTTaGAGGCCCCCTCGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLLQQRS*RPPRCP
Trigger: CGGGCAGCGAGGGGGCCTTCAACTCCTCTGTTGGAG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGATTGTTCCTGGAGCTaGGAAGCCTTTTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACDCSWS*EAFSFS
Trigger: GGAGAAAGAAAAGGCTTCTCAGCTCCAGGAACAATC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGACGGGAGAGTCAACTaGAGTCTTCTCTTCTATGAA +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFDGRVN*SLLFYE
Trigger: TTCATAGAAGAGAAGACTTCAGTTGACTCTCCCGTC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTGCATTGCAGATAAATaGAGGTATGGCGTCTGTACT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASCIADK*RYGVCT
Trigger: AGTACAGACGCCATACCTTCATTTATCTGCAATGCA...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGAGTAGACTGTTGCCTTaGAGAATCTGTCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQSRLLP*RICHLQ
Trigger: CTGAAGGTGACAGATTCTTCAAGGCAACAGTCTACT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAAGTAGACTGTTGCCTTaGAGAATCTGTCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRSRLLP*RICHLQ
Trigger: CTGAAGGTGACAGATTCTTCAAGGCAACAGTCTACT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAAGTAGACTGTTGCCTTaGAGAATCTGTCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTSRLLP*RICHLQ
Trigger: CTGAAGGTGACAGATTCTTCAAGGCAACAGTCTACT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCAACCCTCAAGACCTTaGAAAGCAAGAAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACQPSRP*KARSQP
Trigger: AGGCTGACTTCTTGCTTTTCAAGGTCTTGAGGGTTG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGTGAGGGGGTCGCAGTaGCCATGGCCAGAACACTTC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSVRGSQ*PWPEHF
Trigger: GAAGTGTTCTGGCCATGGTCACTGCGACCCCCTCAC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATTCTCCATCCATAAGTaGGAGCAAATGCAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTFSIHK*EQMQRF
Trigger: AAAGCGCTGCATTTGCTCTCACTTATGGATGGAGAA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTAGGAAGCTCCATTTCTaGTGGAACCATTCATGGAAA +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASRKLHF*WNHSWK
Trigger: TTTCCATGAATGGTTCCATCAGAAATGGAGCTTCCT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCCATTATCTGTCCTTTaGGCAATAACTGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPPLSVL*AITEGS
Trigger: GCTTCCTTCAGTTATTGCTCAAAGGACAGATAATGG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGGGGAAGAAGGTCAATaGACTATTCTAAAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASGEEGQ*TILKEW
Trigger: CCACTCTTTTAGAATAGTTCATTGACCTTCTTCCCC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATTCTTCCTTAGCTCTTaGATGGCCAACAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRFFLSS*MANSCF
Trigger: AAAGCAGCTGTTGGCCATTCAAGAGCTAAGGAAGAA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATTCTTCCTTAGCTCTTaGATGGCCAACAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTFFLSS*MANSCF
Trigger: AAAGCAGCTGTTGGCCATTCAAGAGCTAAGGAAGAA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAGAATACTGCGGGAGATaGCAAAAGCACCTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLREYCGR*QKHLKA
Trigger: AGCTTTTAGGTGCTTTTGTCATCTCCCGCAGTATTC...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAATAAGCAGTCCACCATaGAGAATGCTGGTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTISSPP*RMLVGH
Trigger: ATGACCAACCAGCATTCTTCATGGTGGACTGCTTAT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGCATCACTGGCTTGTTaGGTGGTACATTTTCTTACC +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTASLAC*VVHFLT
Trigger: GGTAAGAAAATGTACCACTCAACAAGCCAGTGATGC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGCATCACTGGCTTGTTaGGTGGTACATTTTCTTACC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFASLAC*VVHFLT
Trigger: GGTAAGAAAATGTACCACTCAACAAGCCAGTGATGC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCTCCCTCTGGGCTCCTaGTTGCCACTGGGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRLPLGS*LPLGCK
Trigger: CTTGCAACCCAGTGGCAAGCAGGAGCCCAGAGGGAG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATAGCTCAGGGTCCTGCTaGGTCTCCGCTGGCACCGCA +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDSSGSC*VSAGTA
Trigger: TGCGGTGCCAGCGGAGACGCAGCAGGACCCTGAGCT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTAGCTCAGGGTCCTGCTaGGTCTCCGCTGGCACCGCA +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLSSGSC*VSAGTA
Trigger: TGCGGTGCCAGCGGAGACGCAGCAGGACCCTGAGCT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGGCAAAGTGAGCTCTTaGAGTTGGGGAGAAACAACT +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACGKVSS*SWGETT
Trigger: AGTTGTTTCTCCCCAACTGCAAGAGCTCACTTTGCC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATCTGGTGATCGTCACTaGTCTGGTTTCCATTCAAAG +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRSGDRH*SGFHSK
Trigger: CTTTGAATGGAAACCAGAGCAGTGACGATCACCAGA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGTCTGGTGATCGTCACTaGTCTGGTTTCCATTCAAAG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQSGDRH*SGFHSK
Trigger: CTTTGAATGGAAACCAGAGCAGTGACGATCACCAGA...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGCACAAGAACATGTCTaGCACCAGCCCGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRAQEHV*HQPGLW
Trigger: CCAGAGCCCGGGCTGGTGGCAGACATGTTCTTGTGC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCGCTGCTCTGTCAGCTaGCCAACACCAACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRRCSVS*PTPTCR
Trigger: CCTGCAGGTTGGTGTTGGGCAGCTGACAGAGCAGCG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCGCTGCTCTGTCAGCTaGCCAACACCAACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSRCSVS*PTPTCR
Trigger: CCTGCAGGTTGGTGTTGGGCAGCTGACAGAGCAGCG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCTTCAGAAGGCAACCTaGTGTATCAACCCTCAAGAC +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACLQKAT*CINPQD
Trigger: GTCTTGAGGGTTGATACAGCAGGTTGCCTTCTGAAG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTTCCACAGATGGCCCGTaGCTCTTAGACAAGCTATTT +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACSTDGP*LLDKLF
Trigger: AAATAGCTTGTCTAAGAGGCACGGGCCATCTGTGGA...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGTCAGCACAGAAAGCTTaGTACATGCAAGACTCCGTA +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQSAQKA*YMQDSV
Trigger: TACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGA...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATCAGCACAGAAAGCTTaGTACATGCAAGACTCCGTA +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTSAQKA*YMQDSV
Trigger: TACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGAGGGCTTGGCACTGTaGGAGTGTTGCCGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKREGLAL*ECCRQH
Trigger: GTGCTGACGGCAACACTCGCACAGTGCCAAGCCCTC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTACTTTACATTTGGGCTaGTGTCCCCTATGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFTLHLG*CPLCQK
Trigger: TTTCTGGCATAGGGGACAGCAGCCCAAATGTAAAGT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAACTTTACATTTGGGCTaGTGTCCCCTATGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTTLHLG*CPLCQK
Trigger: TTTCTGGCATAGGGGACAGCAGCCCAAATGTAAAGT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGTTTAGGAGCCAGATTTaGCCTCAAGAACTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQFRSQI*PQELWS
Trigger: TGACCACAGTTCTTGAGGCCAAATCTGGCTCCTAAA...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACACCTTGGTAGTCTGTaGGGTGGCTTATTAAATTCC +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTHLGSL*GGLLNS
Trigger: GGAATTTAATAAGCCACCCCACAGACTACCAAGGTG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGTATCATCTGTACTTTaGCTGCCATCAATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFVSSVL*LPSMRA
Trigger: AGCCCTCATTGATGGCAGCCAAAGTACAGATGATAC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAGTATCATCTGTACTTTaGCTGCCATCAATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRVSSVL*LPSMRA
Trigger: AGCCCTCATTGATGGCAGCCAAAGTACAGATGATAC...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCTATTGTTTTCAGGCTaGACAATCACAGTCACCACA +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPLLFSG*TITVTT
Trigger: TGTGGTGACTGTGATTGTCCAGCCTGAAAACAATAG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACTATTGTTTTCAGGCTaGACAATCACAGTCACCACA +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQLLFSG*TITVTT
Trigger: TGTGGTGACTGTGATTGTCCAGCCTGAAAACAATAG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGGTAGCACTTTCCACTaGGAAGATCAGCTCTTTATC +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQGSTFH*EDQLFI
Trigger: GATAAAGAGCTGATCTTCCCAGTGGAAAGTGCTACC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGGAGACCAGTCACAGTaGCTATTGCTTTGTCAATAT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPGDQSQ*LLLCQY
Trigger: ATATTGACAAAGCAATAGCCACTGTGACTGGTCTCC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCCAGCTGCTGGACTCTaGCCATCCCGGATCCACAGA +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRPAAGL*PSRIHR
Trigger: TCTGTGGATCCGGGATGGCCAGAGTCCAGCAGCTGG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCTGAAGATTGTGTCCTaGTCACTGTCAAACTCAGAC +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFLKIVS*SLSNSD
Trigger: GTCTGAGTTTGACAGTGACCAGGACACAATCTTCAG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGACTGAAGATTGTGTCCTaGTCACTGTCAAACTCAGAC +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRLKIVS*SLSNSD
Trigger: GTCTGAGTTTGACAGTGACCAGGACACAATCTTCAG...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGCTGAAGATTGTGTCCTaGTCACTGTCAAACTCAGAC +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQLKIVS*SLSNSD
Trigger: GTCTGAGTTTGACAGTGACCAGGACACAATCTTCAG...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAACACATCTAACCCACTaGGGAAGAAGGTCAATGAAC +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRTHLTH*GRRSMN
Trigger: GTTCATTGACCTTCTTCCCCAGTGGGTTAGATGTGT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAACACATCTAACCCACTaGGGAAGAAGGTCAATGAAC +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTTHLTH*GRRSMN
Trigger: GTTCATTGACCTTCTTCCCCAGTGGGTTAGATGTGT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGACGGTCTTTTAGTACGTaGGGATACACATCTAACCCA +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRRSFST*GYTSNP
Trigger: TGGGTTAGATGTGTATCCCCACGTACTAAAAGACCG...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCGGTCTTTTAGTACGTaGGGATACACATCTAACCCA +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFRSFST*GYTSNP
Trigger: TGGGTTAGATGTGTATCCCCACGTACTAAAAGACCG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTTCCTTAGCTCTTGAATaGCCAACAGCTGCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFSLALE*PTAAFL
Trigger: CAAGAAAGCAGCTGTTGGCCATTCAAGAGCTAAGGA...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATCCTTAGCTCTTGAATaGCCAACAGCTGCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRSLALE*PTAAFL
Trigger: CAAGAAAGCAGCTGTTGGCCATTCAAGAGCTAAGGA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATTTGCATTCAGTTCTTaGAGCCACTACTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRFAFSS*SHYFLA
Trigger: GGCCAAGAAGTAGTGGCTCCAAGAACTGAATGCAAA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGAATAGAACTTTCAGGTaGCCCAAAAGTTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPNRTFR*PKSSTR
Trigger: TCTGGTGGAACTTTTGGGCCACCTGAAAGTTCTATT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAAATAGAACTTTCAGGTaGCCCAAAAGTTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQNRTFR*PKSSTR
Trigger: TCTGGTGGAACTTTTGGGCCACCTGAAAGTTCTATT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATGTTCTGATGAGAAATaGGGTGACAAGACAGGACTC +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRCSDEK*GDKTGL
Trigger: GAGTCCTGTCTTGTCACCCCATTTCTCATCAGAACA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTATGAAGAATGCTGGTTaGTCATTCCATCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASMKNAG*SFHLVL
Trigger: AAGCACGAGATGGAATGACCAACCAGCATTCTTCAT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACACCATGAAGAATGCTaGTTGGTCATTCCATCTCGT +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTHHEEC*LVIPSR
Trigger: ACGAGATGGAATGACCAACCAGCATTCTTCATGGTG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAAAAAGGTGGCATCACTaGCTTGTTGAGTGGTACATT +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQKRWHH*LVEWYI
Trigger: AATGTACCACTCAACAAGCCAGTGATGCCACCTTTT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTAAAAGGTGGCATCACTaGCTTGTTGAGTGGTACATT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASKRWHH*LVEWYI
Trigger: AATGTACCACTCAACAAGCCAGTGATGCCACCTTTT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTAAGCCCAAGACAGGCTaGAGCTACTGCTGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSKPKTG*SYCCAL
Trigger: GAGAGCGCAGCAGTAGCTTCAGCCTGTCTTGGGCTT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCACCAGCAGCAGCAATaGAGAGAGCACACCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRHQQQQ*REHTCG
Trigger: CCCACAGGTGTGCTCTCTTCATTGCTGCTGCTGGTG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCTTTCTCCACGGTGACTaGGCTGAGCTCCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRFLHGD*AELQAC
Trigger: GCAAGCCTGGAGCTCAGCTCAGTCACCGTGGAGAAA...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTTTTCTCCACGGTGACTaGGCTGAGCTCCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSFLHGD*AELQAC
Trigger: GCAAGCCTGGAGCTCAGCTCAGTCACCGTGGAGAAA...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTAAGTCTTCTCTTCTATaGAGGGCCCGTTTATTTCTT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASKSSLL*RARLFL
Trigger: AAGAAATAAACGGGCCCTTCATAGAAGAGAAGACTT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGAAGTCTTCTCTTCTATaGAGGGCCCGTTTATTTCTT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPKSSLL*RARLFL
Trigger: AAGAAATAAACGGGCCCTTCATAGAAGAGAAGACTT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGGCAAAGTTATGGTGTaGTTTGGTCCTGCATTAGCA +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACGKVMV*FGPALA
Trigger: TGCTAATGCAGGACCAAATCACACCATAACTTTGCC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGTGCATTGCAGATAAATaGAGGTATGGCGTCTGTACT +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQCIADK*RYGVCT
Trigger: AGTACAGACGCCATACCTTCATTTATCTGCAATGCA...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGTCATCAGTAGACCTTaGACCATCCAAAGTAATGGA +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTVISRP*TIQSNG
Trigger: TCCATTACTTTGGATGGTTCAAGGTCTACTGATGAC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAAGGAAGCTCCATTTCTaGTGGAACCATTCATGGAAA +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTRKLHF*WNHSWK
Trigger: TTTCCATGAATGGTTCCATCAGAAATGGAGCTTCCT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCCTTCCACTTTACAATaGACTGCGCCATTATCTGTC +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACPSTLQ*TAPLSV
Trigger: GACAGATAATGGCGCAGTTCATTGTAAAGTGGAAGG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGGGGAAGAAGGTCAATaGACTATTCTAAAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFGEEGQ*TILKEW
Trigger: CCACTCTTTTAGAATAGTTCATTGACCTTCTTCCCC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGGGGTGGCCCGGGTGTaGTCCACAGGAGACTATGCA +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDGVARV*STGDYA
Trigger: TGCATAGTCTCCTGTGGATCACACCCGGGCCACCCC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTCACTACTGTGATGTTTaGTTTCCCAGAGATTCAAGA +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASHYCDV*FPRDSR
Trigger: TCTTGAATCTCTGGGAAATCAAACATCACAGTAGTG...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTATAAGCAGTCCACCATaGAGAATGCTGGTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACISSPP*RMLVGH
Trigger: ATGACCAACCAGCATTCTTCATGGTGGACTGCTTAT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCTGAAGCTCGCCCCATaGGTTGCTGCTGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLLKLAP*VAAGPE
Trigger: CTCAGGGCCAGCAGCAACGCATGGGGCGAGCTTCAG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCTCTGGGCTCCTGCTTaGCACTGGGTTGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRLWAPA*HWVARG
Trigger: ACCTCTTGCAACCCAGTGGCAAGCAGGAGCCCAGAG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCTGGGAGGTGTTGGGATaGTGTGCTCTGTACTCCCCG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRWEVLG*CALYSP
Trigger: CGGGGAGTACAGAGCACAGCATCCCAACACCTCCCA...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAGTCACAGTGGCTATTaGTTTGTCAATATTTTCCAT +
Preference number: 4 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLSHSGY*FVNIFH
Trigger: ATGGAAAATATTGACAAAGCAATAGCCACTGTGACT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGATGACATCTCCAGCTaGTGGACTCTGGCCATCCCG +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSDDISS*WTLAIP
Trigger: CGGGATGGCCAGAGTCCAGCAGCTGGAGATGTCATC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCAGGGTGTCCTTCCGCTaGTCTGTCAGCTGCCCAACA +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRRVSFR*SVSCPT
Trigger: TGTTGGGCAGCTGACAGAGCAGCGGAAGGACACCCT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTAAACCGTGTTTAGAATaGTGTTCCTTAGAGGCAATC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASKPCLE*CSLEAI
Trigger: GATTGCCTCTAAGGAACAGCATTCTAAACACGGTTT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTTAACTCCAGTTAATTaGTCGGGAGTACTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASLTPVN*SGVLLC
Trigger: ACAAAGCAGTACTCCCGAGCAATTAACTGGAGTTAA...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCTTCTTCATCAGCAATaGATTCCTAGTTTTCCCATG +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPLLHQQ*IPSFPM
Trigger: CATGGGAAAACTAGGAATGCATTGCTGATGAAGAAG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGTATCATCTGTACTTTaGCTGCCATCAATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACVSSVL*LPSMRA
Trigger: AGCCCTCATTGATGGCAGCCAAAGTACAGATGATAC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTTGCATTAGCAACTGGTaGGTAGTCCACAGCATTGTT +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACCISNW*VVHSIV
Trigger: AACAATGCTGTGGACTACCCACCAGTTGCTAATGCA...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGAGTTATGGTGTGATTTaGTCCTGCATTAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQSYGVI*SCISNW
Trigger: CCAGTTGCTAATGCAGGACCAAATCACACCATAACT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCTATTGTTTTCAGGCTaGACAATCACAGTCACCACA +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFLLFSG*TITVTT
Trigger: TGTGGTGACTGTGATTGTCCAGCCTGAAAACAATAG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGCTATTGTTTTCAGGCTaGACAATCACAGTCACCACA +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQLLFSG*TITVTT
Trigger: TGTGGTGACTGTGATTGTCCAGCCTGAAAACAATAG...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGGAGACCAGTCACAGTaGCTATTGCTTTGTCAATAT +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFGDQSQ*LLLCQY
Trigger: ATATTGACAAAGCAATAGCCACTGTGACTGGTCTCC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAATTCATGGAAACCTTTaGATTCCCTCTCTCCATCTT +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQIHGNL*IPSLHL
Trigger: AAGATGGAGAGAGGGAATCCAAAGGTTTCCATGAAT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATATGTCAAGTTATTTTaGAAAGTACCTGTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQYVKLF*KVPVGD
Trigger: GTCCCCGACAGGTACTTTCCAAAATAACTTGACATA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTTGTTCTGATGAGAAATaGGGTGACAAGACAGGACTC +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACCSDEK*GDKTGL
Trigger: GAGTCCTGTCTTGTCACCCCATTTCTCATCAGAACA...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGAAGAATGCTGGTTaGTCATTCCATCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQMKNAG*SFHLVL
Trigger: AAGCACGAGATGGAATGACCAACCAGCATTCTTCAT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAATGAAGAATGCTGGTTaGTCATTCCATCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTMKNAG*SFHLVL
Trigger: AAGCACGAGATGGAATGACCAACCAGCATTCTTCAT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAAAAAGGTGGCATCACTaGCTTGTTGAGTGGTACATT +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTKRWHH*LVEWYI
Trigger: AATGTACCACTCAACAAGCCAGTGATGCCACCTTTT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGGTTTCCAAGTTAGGTaGAATGACTGCATTGGAATA +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQGFQVR*NDCIGI
Trigger: TATTCCAATGCAGTCATTTCACCTAACTTGGAAACC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTAAGTCTTCTCTTCTATaGAGGGCCCGTTTATTTCTT +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFKSSLL*RARLFL
Trigger: AAGAAATAAACGGGCCCTTCATAGAAGAGAAGACTT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAAAGTCTTCTCTTCTATaGAGGGCCCGTTTATTTCTT +
Preference number: 4 (lower is better)
Translates to: RSFCDGRIREARLRWPRTKSSLL*RARLFL
Trigger: AAGAAATAAACGGGCCCTTCATAGAAGAGAAGACTT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCAGATTCTAGGCTTATaGAGCTCAATACTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPQILGL*SSILVK
Trigger: TTTAACCAGTATTGAGCTTCATAAGCCTAGAATCTG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGACACTACTGTGATGTTTaGTTTCCCAGAGATTCAAGA +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRHYCDV*FPRDSR
Trigger: TCTTGAATCTCTGGGAAATCAAACATCACAGTAGTG...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTTGCTTGCCACTGGGTTaGAAGAGGTCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSCLPLG*KRSFSS
Trigger: GCTGGAGAAGGACCTCTTGCAACCCAGTGGCAAGCA...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGGTGTTGGGATGCTGTaGTCTGTACTCCCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDGVGML*SVLPGV
Trigger: CACCCCGGGGAGTACAGAGCACAGCATCCCAACACC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGGCGTCTGTACTCCCTaGATGACCACATGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSGVCTP*MTTCLP
Trigger: GGGCAAACATGTGGTCATGCAGGGAGTACAGACGCC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCTTCCTAGGGTCTGGCTaGACTTCCACAGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRFLGSG*TSTVAV
Trigger: CACTGCCACTGTGGAAGTGCAGCCAGACCCTAGGAA...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTGCCCAACACCAACCTaGAGGGTCAGCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLCPTPT*RVSSTR
Trigger: CCTGGTGGAGCTGACCCTGCAGGTTGGTGTTGGGCA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCGCTGCTCTGTCAGCTaGCCAACACCAACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLRCSVS*PTPTCR
Trigger: CCTGCAGGTTGGTGTTGGGCAGCTGACAGAGCAGCG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGCACTTTACAATGAACTaGGCCATTATCTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQHFTMN*AIICPL
Trigger: CAAAGGACAGATAATGGCGCAGTTCATTGTAAAGTG...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTCCAGAAATTCACATTTaGATGCAAACAACCATAACC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASPEIHI*MQTTIT
Trigger: GGTTATGGTTGTTTGCATGCAAATGTGAATTTCTGG...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCCAGAAATTCACATTTaGATGCAAACAACCATAACC +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPPEIHI*MQTTIT
Trigger: GGTTATGGTTGTTTGCATGCAAATGTGAATTTCTGG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACCAGAAATTCACATTTaGATGCAAACAACCATAACC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQPEIHI*MQTTIT
Trigger: GGTTATGGTTGTTTGCATGCAAATGTGAATTTCTGG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCTCCCCTCGCTGCACTaGTTACGGGCACAACATGGG +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDLPSLH*LRAQHG
Trigger: CCCATGTTGTGCCCGTAAGCAGTGCAGCGAGGGGAG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535378.5
CDS-3UTR CCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCTGGCCTCAAGAACTGTaGTCACTGCTGGCGACACTG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRWPQEL*SLLATL
Trigger: CAGTGTCGCCAGCAGTGACCACAGTTCTTGAGGCCA...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATAAGAGAGCACACCTGTaGGGGGCGCCATTGTGCACC +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDKRAHL*GAPLCT
Trigger: GGTGCACAATGGCGCCCCCCACAGGTGTGCTCTCTT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTTTCTACAGGTGGCGCTaGCGCAACAAAGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSFYRWR*RNKGLQ
Trigger: CTGAAGGCCTTTGTTGCGCCAGCGCCACCTGTAGAA...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGGTTGTTTCTACAGGTaGCGCTGGCGCAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSGCFYR*RWRNKG
Trigger: GCCTTTGTTGCGCCAGCGCCACCTGTAGAAACAACC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGCCGGCCACAGCCACTaGAGGTCTATTGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSAGHSH*RSIVFR
Trigger: CCTGAAAACAATAGACCTCCAGTGGCTGTGGCCGGC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAATTCATGGAAACCTTTaGATTCCCTCTCTCCATCTT +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRIHGNL*IPSLHL
Trigger: AAGATGGAGAGAGGGAATCCAAAGGTTTCCATGAAT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTATTCATGGAAACCTTTaGATTCCCTCTCTCCATCTT +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFIHGNL*IPSLHL
Trigger: AAGATGGAGAGAGGGAATCCAAAGGTTTCCATGAAT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTACTATTCTAAAAGAGTaGGTTTTGTGCTGTAACTCC +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASTILKE*VLCCNS
Trigger: GGAGTTACAGCACAAAACCCACTCTTTTAGAATAGT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAACTATTCTAAAAGAGTaGGTTTTGTGCTGTAACTCC +
Preference number: 4 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQTILKE*VLCCNS
Trigger: GGAGTTACAGCACAAAACCCACTCTTTTAGAATAGT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCCGTACCTCCACAGATaGCCCGTGCCTCTTAGACAA +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSPYLHR*PVPLRQ
Trigger: TTGTCTAAGAGGCACGGGCCATCTGTGGAGGTACGG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTAAAACCAGGAGGGCTTaGCACTGTGCGAGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSKTRRA*HCASVA
Trigger: GGCAACACTCGCACAGTGCCAAGCCCTCCTGGTTTT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATATGTCAAGTTATTTTaGAAAGTACCTGTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRYVKLF*KVPVGD
Trigger: GTCCCCGACAGGTACTTTCCAAAATAACTTGACATA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCCCGCGCACAAAAGGTaGCATCACTGGCTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSPAHKR*HHWLVE
Trigger: CTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCTTACGGGCACAACATaGGCTCGGCCAGCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLLTGTT*ARPAQS
Trigger: AGACTGGGCTGGCCGAGCCCATGTTGTGCCCGTAAG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535378.5
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCTTCTGAGGCGGCCCTaGAGAGAGTTTGGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDLLRRP*REFGAS
Trigger: GCTTGCACCAAACTCTCTTCAGGGCCGCCTCAGAAG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCTCCCGGTAGTCATCTaGGTACTCAGACATCTCCTC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSLPVVI*VLRHLL
Trigger: GAGGAGATGTCTGAGTACTCAGATGACTACCGGGAG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCTCCAACACCTCTCCTaGAGATGGAGTAGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRLQHLS*RWSSRQ
Trigger: TTGCCGACTACTCCATCTTCAGGAGAGGTGTTGGAG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCTCCAACACCTCTCCTaGAGATGGAGTAGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSLQHLS*RWSSRQ
Trigger: TTGCCGACTACTCCATCTTCAGGAGAGGTGTTGGAG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTTCTGTACTCCCTGCATaGCCACATGTTTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSSVLPA*PHVCPH
Trigger: GTGAGGGCAAACATGTGGTCATGCAGGGAGTACAGA...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCTCTGTACTCCCTGCATaGCCACATGTTTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRSVLPA*PHVCPH
Trigger: GTGAGGGCAAACATGTGGTCATGCAGGGAGTACAGA...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGGTCAGAGCCATCGATaGCATCTCCAGCTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDGQSHR*HLQLLD
Trigger: GTCCAGCAGCTGGAGATGTCATCGATGGCTCTGACC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCCCCCTGACTGTCGGTaGCTCGCAAGTGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDPPDCR*LASGKC
Trigger: ACACTTTCCACTTGCGAGTCACCGACAGTCAGGGGG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGTGCTTGTTAGCCTGTaGGCCCTACAAACACCCACT +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSVLVSL*ALQTPT
Trigger: AGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCAC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCTGTGCTTCGGTGCTTaGTACCACAGTTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSLCFGA*YHSCSL
Trigger: GAGAGAGCAACTGTGGTATCAAGCACCGAAGCACAG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537886.5
CDS-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCTTACGGGCACAACCTaGAATTGTCACCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSLTGTT*NCHQQQ
Trigger: CTGCTGCTGGTGACAATTGCAGGTTGTGCCCGTAAG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378214.8
ENST00000537886.5
CDS-3UTR GCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATATGTCCTCCCCTCGCTaGACTGCTTACGGGCACAAC +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDMSSPR*TAYGHN
Trigger: GTTGTGCCCGTAAGCAGTGCAGCGAGGGGAGGACAT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCTCTGGGCTCCTGCTTaGCACTGGGTTGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDLWAPA*HWVARG
Trigger: ACCTCTTGCAACCCAGTGGCAAGCAGGAGCCCAGAG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGCTGAGCTCCAGGCTTaGCGGAGGAAGACTATGGGA +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDAELQA*RRKTMG
Trigger: TCCCATAGTCTTCCTCCGGCAAGCCTGGAGCTCAGC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTGGGAGGTGTTGGGATaGTGTGCTCTGTACTCCCCG +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLWEVLG*CALYSP
Trigger: CGGGGAGTACAGAGCACAGCATCCCAACACCTCCCA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGAGTCACAGTGGCTATTaGTTTGTCAATATTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VSTESLLHARLRTSTDGPSHSGY*FVNIFH
Trigger: ATGGAAAATATTGACAAAGCAATAGCCACTGTGACT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGATGACATCTCCAGCTaGTGGACTCTGGCCATCCCG +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLDDISS*WTLAIP
Trigger: CGGGATGGCCAGAGTCCAGCAGCTGGAGATGTCATC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTATCAGGCTGGAGTTGTaGTCTGTGCTTCGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSIRLEL*SVLRCL
Trigger: CAAGCACCGAAGCACAGAGCACAACTCCAGCCTGAT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCACTTTACAATGAACTaGGCCATTATCTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACHFTMN*AIICPL
Trigger: CAAAGGACAGATAATGGCGCAGTTCATTGTAAAGTG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGCACTGTGCGAGTGTTaGCGTCAGCACAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRALCEC*RQHRKL
Trigger: AAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCATCCACAGGAGACTATaGAGGCCATCTCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRIHRRL*RPSLPL
Trigger: CAGAGGGAGAGATGGCCTGCATAGTCTCCTGTGGAT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGCTAGTGGGAGGTGTTaGGATGCTGTGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRASGRC*DAVLCT
Trigger: AGTACAGAGCACAGCATCCCAACACCTCCCACTAGC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGCTAGTGGGAGGTGTTaGGATGCTGTGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSASGRC*DAVLCT
Trigger: AGTACAGAGCACAGCATCCCAACACCTCCCACTAGC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCACCAGCCCGGGCTCTaGGAGGACTATTATTTTCCT +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRHQPGL*EDYYFP
Trigger: AGGAAAATAATAGTCCTCCCAGAGCCCGGGCTGGTG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGACATCTCCAGCTGCTaGACTCTGGCCATCCCGGAT +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLDISSC*TLAIPD
Trigger: ATCCGGGATGGCCAGAGTCCAGCAGCTGGAGATGTC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGCTGCACTTCCACAGTaGCAGTGTCTGTGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDAALPQ*QCLCPR
Trigger: CCTCGGACACAGACACTGCCACTGTGGAAGTGCAGC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTTGGGCCCGAATCTTCTaGACCTTAATGTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSWARIF*TLMSES
Trigger: GGACTCGGACATTAAGGTCCAGAAGATTCGGGCCCA...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGACTATTCTAAAAGAGTaGGTTTTGTGCTGTAACTCC +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQTILKE*VLCCNS
Trigger: GGAGTTACAGCACAAAACCCACTCTTTTAGAATAGT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAACTATTCTAAAAGAGTaGGTTTTGTGCTGTAACTCC +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRTILKE*VLCCNS
Trigger: GGAGTTACAGCACAAAACCCACTCTTTTAGAATAGT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGCATTTAATGTAAACTaGGGATCCGTTTACATTAGA +
Preference number: 4 (lower is better)
Translates to: QKACYMQDSVPPQMARASAFNVN*GSVYIR
Trigger: TCTAATGTAAACGGATCCCCAGTTTACATTAAATGC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAGTACTGCTTTGTGGGTaGGAATGTTTTAATTGTCTT +
Preference number: 4 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRVLLCG*ECFNCL
Trigger: AAGACAATTAAAACATTCCCACCCACAAAGCAGTAC...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR CAA 72 bp CTCCCTTCTTCCTCATTACGCCCGATGACTTTACATTaGGGCTGCTGTCCCCTATGCCAGAAATTCACATTT +
Preference number: 4 (lower is better)
Translates to: LPSSSLRPMTLH*GCCPLCQKFTF
Trigger: AAATGTGAATTTCTGGCATAGGGGACAGCAGCCCAAATGTAAAGTCATCGGGCGTAATGAGGAAGAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR CAA 72 bp CCTCCTTCATTGAATGTAAACCAGCAACTAAAGTGCTaGTTAGCCTGTGAGCCCTACAAACACCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: PPSLNVNQQLKC*LACEPYKHPLP
Trigger: TGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCACTTTAGTTGCTGGTTTACATTCAATGAAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATACGACAGGGAAGGTGTaGGACACCCGCATGATTCTG +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDTTGKV*DTRMIL
Trigger: CAGAATCATGCGGGTGTCTCACACCTTCCCTGTCGT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCCATCTTTTCTCGGCTaGAGATTGTGTCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRPSFLG*RLCPGH
Trigger: GTGACCAGGACACAATCTTCAGCCGAGAAAAGATGG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCAGATTCTAGGCTTATaGAGCTCAATACTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: CLLACEPYKHPLPYSRACQILGL*SSILVK
Trigger: TTTAACCAGTATTGAGCTTCATAAGCCTAGAATCTG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCCTCATTACGCCCGATaGCTTTACATTTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSPHYAR*LYIWAA
Trigger: AGCAGCCCAAATGTAAAGTCATCGGGCGTAATGAGG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTGCTTGCCACTGGGTTaGAAGAGGTCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLCLPLG*KRSFSS
Trigger: GCTGGAGAAGGACCTCTTGCAACCCAGTGGCAAGCA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTTTGGGGAGAAACAACTaGTACAGGTGGCAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSLGRNN*YRWQVD
Trigger: GTCAACCTGCCACCTGTAGCAGTTGTTTCTCCCCAA...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTAGTCACAGTGGCTATTaGTTTGTCAATATTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFSHSGY*FVNIFH
Trigger: ATGGAAAATATTGACAAAGCAATAGCCACTGTGACT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGAGTCACAGTGGCTATTaGTTTGTCAATATTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQSHSGY*FVNIFH
Trigger: ATGGAAAATATTGACAAAGCAATAGCCACTGTGACT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCACCAGATTCGTAAGCTaGAGAGCCACACTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRTRFVS*RATLWS
Trigger: TGACCACAGTGTGGCTCTGCAGCTTACGAATCTGGT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGCTCCTGCTTGCCACTaGGTTGCAAGAGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLAPACH*VARGPS
Trigger: AGAAGGACCTCTTGCAACCCAGTGGCAAGCAGGAGC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGCCGGAGGAAGACTATaGGAAGGCATTAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSAGGRL*EGIRTS
Trigger: AGAGGTTCTAATGCCTTCCCATAGTCTTCCTCCGGC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTTCTACAGGTGGCGCTaGCGCAACAAAGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLFYRWR*RNKGLQ
Trigger: CTGAAGGCCTTTGTTGCGCCAGCGCCACCTGTAGAA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGGTTGTTTCTACAGGTaGCGCTGGCGCAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLGCFYR*RWRNKG
Trigger: GCCTTTGTTGCGCCAGCGCCACCTGTAGAAACAACC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATTCGGTGACTCGCAAGTaGAAAGTGTACACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDSVTRK*KVYTPS
Trigger: GGAGGGGGTGTACACTTTCCACTTGCGAGTCACCGA...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGTAACTCCCACTGACTaGTCTTGGATTCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRVTPTD*SWIQGV
Trigger: GACCCCTTGAATCCAAGACCAGTCAGTGGGAGTTAC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGTAACTCCCACTGACTaGTCTTGGATTCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSVTPTD*SWIQGV
Trigger: GACCCCTTGAATCCAAGACCAGTCAGTGGGAGTTAC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTAGGACCAAGGGTGGATaGGGAACTACCCTGAACCAG +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLRTKGG*GTTLNQ
Trigger: CTGGTTCAGGGTAGTTCCCCATCCACCCTTGGTCCT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCCTCAGGACCAAGGGTaGATGGGGAACTACCCTGAA +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLPQDQG*MGNYPE
Trigger: TTCAGGGTAGTTCCCCATCCACCCTTGGTCCTGAGG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCCTCAGGACCAAGGGTaGATGGGGAACTACCCTGAA +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDPQDQG*MGNYPE
Trigger: TTCAGGGTAGTTCCCCATCCACCCTTGGTCCTGAGG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGGGAAACATTTTCTCTaGCACTCCTGCCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSGKHFL*HSCPGV
Trigger: AACACCAGGGCAGGAGTGCCAGAGAAAATGTTTCCC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCCCGCGCACAAAAGGTaGCATCACTGGCTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLPAHKR*HHWLVE
Trigger: CTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
3UTR CAA 72 bp ATTTGGGCTGCTGTCCCCTATGCCAGAAATTCACATTaGCATGCAAACAACCATAACCCTGGTCACCTGATA +
Preference number: 4 (lower is better)
Translates to: IWAAVPYARNSH*HANNHNPGHLI
Trigger: TATCAGGTGACCAGGGTTATGGTTGTTTGCATGCAAATGTGAATTTCTGGCATAGGGGACAGCAGCCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCTCCAACACCTCTCCTaGAGATGGAGTAGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLLQHLS*RWSSRQ
Trigger: TTGCCGACTACTCCATCTTCAGGAGAGGTGTTGGAG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCTCCAACACCTCTCCTaGAGATGGAGTAGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDLQHLS*RWSSRQ
Trigger: TTGCCGACTACTCCATCTTCAGGAGAGGTGTTGGAG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGCCATCAATGAGGGCTaGCGTCAAAGGCAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLAINEG*RQRQSE
Trigger: CTCACTTTGCCTTTGACGTCAGCCCTCATTGATGGC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATTTTGGCTGCCATCAATaGGGGCTGACGTCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDFGCHQ*GLTSKA
Trigger: TGCCTTTGACGTCAGCCCTCATTGATGGCAGCCAAA...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATTCTGTACTCCCTGCATaGCCACATGTTTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDSVLPA*PHVCPH
Trigger: GTGAGGGCAAACATGTGGTCATGCAGGGAGTACAGA...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCTTACGGGCACAACCTaGAATTGTCACCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDLTGTT*NCHQQQ
Trigger: CTGCTGCTGGTGACAATTGCAGGTTGTGCCCGTAAG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378214.8
ENST00000537886.5
CDS-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGGTGTGATTTGGTCCTaGATTAGCAACTGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSGVIWS*ISNWWV
Trigger: TACCCACCAGTTGCTAATGCAGGACCAAATCACACC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCTTCAGAAGGCAACCTaGTGTATCAACCCTCAAGAC +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRLQKAT*CINPQD
Trigger: GTCTTGAGGGTTGATACAGCAGGTTGCCTTCTGAAG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCAGAAAGCTTGCTACATaGAAGACTCCGTACCTCCAC +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRRKLAT*KTPYLH
Trigger: GTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGGCTGCTGTCCCCTATaGCAGAAATTCACATTTGCA +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRGCCPL*QKFTFA
Trigger: TGCAAATGTGAATTTCTGGCATAGGGGACAGCAGCC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCAGTTCCACCAGAATTTaGCCTCCATCCATCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRSSTRI*PPSIKA
Trigger: TGCCTTGATGGATGGAGGGCAAATTCTGGTGGAACT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTAGTTCCACCAGAATTTaGCCTCCATCCATCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSSSTRI*PPSIKA
Trigger: TGCCTTGATGGATGGAGGGCAAATTCTGGTGGAACT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTATCCACAGGAGACTATaGAGGCCATCTCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLIHRRL*RPSLPL
Trigger: CAGAGGGAGAGATGGCCTGCATAGTCTCCTGTGGAT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCAACCAGCAACTAAAGTaGTTGTTAGCCTGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRNQQLK*LLACEP
Trigger: GGGCTCACAGGCTAACAAGCACTTTAGTTGCTGGTT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTAACCAGCAACTAAAGTaGTTGTTAGCCTGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSNQQLK*LLACEP
Trigger: GGGCTCACAGGCTAACAAGCACTTTAGTTGCTGGTT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTGTTGGGTATTGGCCTaGCTACTGGCTGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLCWVLA*LLAALF
Trigger: AAAGAGGGCAGCCAGTAGGCAGGCCAATACCCAACA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTTCCTGCATTAGCAACTaGTGGGTAGTCCACAGCATT +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSSCISN*WVVHSI
Trigger: AATGCTGTGGACTACCCACCAGTTGCTAATGCAGGA...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCTGCTCAGTCCCTGCTaGTCTTTCACTGTCAAACGG +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDLLSPC*SFTVKR
Trigger: CCGTTTGACAGTGAAAGACCAGCAGGGACTGAGCAG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTGGGCCCGAATCTTCTaGACCTTAATGTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLWARIF*TLMSES
Trigger: GGACTCGGACATTAAGGTCCAGAAGATTCGGGCCCA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCGGATACCATCAGGCTaGAGTTGTGCTCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDRIPSG*SCALCF
Trigger: GAAGCACAGAGCACAACTCCAGCCTGATGGTATCCG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCAGGTGTGCTCACACTTaGTACCACAACACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRRCAHT*YHNTGS
Trigger: AGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCTGGCACTCCTGCCCTaGTGTTTAAATACCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSLALLP*CLNTLL
Trigger: AAGCAAGGTATTTAAACACCAGGGCAGGAGTGCCAG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTGTGAGACACCCGCATaGTTCTGGTGGTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLCETPA*FWWFPS
Trigger: ACTTGGAAACCACCAGAATCATGCGGGTGTCTCACA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTAGGTCAAGTCCTTTCTaGTATCCTCAGGTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLRSSPF*YPQVSP
Trigger: GGGACTCACCTGAGGATATCAGAAAGGACTTGACCT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGACGGGAGAGTCAACTaGAGTCTTCTCTTCTATGAA +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSDGRVN*SLLFYE
Trigger: TTCATAGAAGAGAAGACTTCAGTTGACTCTCCCGTC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGGCAAAGTTATGGTGTaGTTTGGTCCTGCATTAGCA +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSGKVMV*FGPALA
Trigger: TGCTAATGCAGGACCAAATCACACCATAACTTTGCC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGGTTTCCATTCAAAGTaGTGGAGTTTTGGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRGFHSK*WSFGAK
Trigger: CTTTGCCCCAAAACTCCATCACTTTGAATGGAAACC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTTTCTCCATCCATAAGTaGGAGCAAATGCAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSFSIHK*EQMQRF
Trigger: AAAGCGCTGCATTTGCTCTCACTTATGGATGGAGAA...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTAGATGCAAAGCCAAGTaGAACCTCCTGTTAGCACAA +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSRCKAK*NLLLAQ
Trigger: TTGTGCTAACAGGAGGTTTCACTTGGCTTTGCATCT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCCTTCCACTTTACAATaGACTGCGCCATTATCTGTC +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRPSTLQ*TAPLSV
Trigger: GACAGATAATGGCGCAGTTCATTGTAAAGTGGAAGG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCCTTCCACTTTACAATaGACTGCGCCATTATCTGTC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSPSTLQ*TAPLSV
Trigger: GACAGATAATGGCGCAGTTCATTGTAAAGTGGAAGG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCTTCTTCCTTAGCTCTTaGATGGCCAACAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRFFLSS*MANSCF
Trigger: AAAGCAGCTGTTGGCCATTCAAGAGCTAAGGAAGAA...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGAATACTGCGGGAGATaGCAAAAGCACCTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKREYCGR*QKHLKA
Trigger: AGCTTTTAGGTGCTTTTGTCATCTCCCGCAGTATTC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGCATCACTGGCTTGTTaGGTGGTACATTTTCTTACC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSASLAC*VVHFLT
Trigger: GGTAAGAAAATGTACCACTCAACAAGCCAGTGATGC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCTCTGGTGATCGTCACTaGTCTGGTTTCCATTCAAAG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRSGDRH*SGFHSK
Trigger: CTTTGAATGGAAACCAGAGCAGTGACGATCACCAGA...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTTCAGCACAGAAAGCTTaGTACATGCAAGACTCCGTA +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSSAQKA*YMQDSV
Trigger: TACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGA...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCACTTTACATTTGGGCTaGTGTCCCCTATGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRTLHLG*CPLCQK
Trigger: TTTCTGGCATAGGGGACAGCAGCCCAAATGTAAAGT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGTCCACCATGAAGAATaGTGGTTGGTCATTCCATCT +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSVHHEE*WLVIPS
Trigger: AGATGGAATGACCAACCAGCATTCTTCATGGTGGAC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCAGGTCCCAGGTCAAATaGTTACTGAATGGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRRSQVK*LLNGRA
Trigger: TGCTCTACCATTCAGTAAGCATTTGACCTGGGACCT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616673.4
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTTTTAGGAGCCAGATTTaGCCTCAAGAACTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSFRSQI*PQELWS
Trigger: TGACCACAGTTCTTGAGGCCAAATCTGGCTCCTAAA...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGCCGGAGGAAGACTATaGGAAGGCATTAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDAGGRL*EGIRTS
Trigger: AGAGGTTCTAATGCCTTCCCATAGTCTTCCTCCGGC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGTATCATCTGTACTTTaGCTGCCATCAATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSVSSVL*LPSMRA
Trigger: AGCCCTCATTGATGGCAGCCAAAGTACAGATGATAC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCTGAAGATTGTGTCCTaGTCACTGTCAAACTCAGAC +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRLKIVS*SLSNSD
Trigger: GTCTGAGTTTGACAGTGACCAGGACACAATCTTCAG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGTAACTCCCACTGACTaGTCTTGGATTCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLVTPTD*SWIQGV
Trigger: GACCCCTTGAATCCAAGACCAGTCAGTGGGAGTTAC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCACACATCTAACCCACTaGGGAAGAAGGTCAATGAAC +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRTHLTH*GRRSMN
Trigger: GTTCATTGACCTTCTTCCCCAGTGGGTTAGATGTGT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCTCCTTAGCTCTTGAATaGCCAACAGCTGCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRSLALE*PTAAFL
Trigger: CAAGAAAGCAGCTGTTGGCCATTCAAGAGCTAAGGA...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCGTTATCCCTATCTATaGCAGTCCAAACGCACAGCC +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLRYPYL*QSKRTA
Trigger: GGCTGTGCGTTTGGACTGCCATAGATAGGGATAACG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGGGAAACATTTTCTCTaGCACTCCTGCCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLGKHFL*HSCPGV
Trigger: AACACCAGGGCAGGAGTGCCAGAGAAAATGTTTCCC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTTTTGCATTCAGTTCTTaGAGCCACTACTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSFAFSS*SHYFLA
Trigger: GGCCAAGAAGTAGTGGCTCCAAGAACTGAATGCAAA...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTTGTTCTGATGAGAAATaGGGTGACAAGACAGGACTC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSCSDEK*GDKTGL
Trigger: GAGTCCTGTCTTGTCACCCCATTTCTCATCAGAACA...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGATTGTTCCTGGAGCTaGGAAGCCTTTTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDDCSWS*EAFSFS
Trigger: GGAGAAAGAAAAGGCTTCTCAGCTCCAGGAACAATC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCTGCATTGCAGATAAATaGAGGTATGGCGTCTGTACT +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRCIADK*RYGVCT
Trigger: AGTACAGACGCCATACCTTCATTTATCTGCAATGCA...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGTCATCAGTAGACCTTaGACCATCCAAAGTAATGGA +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSVISRP*TIQSNG
Trigger: TCCATTACTTTGGATGGTTCAAGGTCTACTGATGAC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGTCATCAGTAGACCTTaGACCATCCAAAGTAATGGA +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRVISRP*TIQSNG
Trigger: TCCATTACTTTGGATGGTTCAAGGTCTACTGATGAC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCAACCCTCAAGACCTTaGAAAGCAAGAAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDQPSRP*KARSQP
Trigger: AGGCTGACTTCTTGCTTTTCAAGGTCTTGAGGGTTG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCAGGAAGCTCCATTTCTaGTGGAACCATTCATGGAAA +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRRKLHF*WNHSWK
Trigger: TTTCCATGAATGGTTCCATCAGAAATGGAGCTTCCT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCCATTATCTGTCCTTTaGGCAATAACTGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSPLSVL*AITEGS
Trigger: GCTTCCTTCAGTTATTGCTCAAAGGACAGATAATGG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGGGGAAGAAGGTCAATaGACTATTCTAAAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSGEEGQ*TILKEW
Trigger: CCACTCTTTTAGAATAGTTCATTGACCTTCTTCCCC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCTTTTCCAGAGCTGTTaGTGGATTGTTCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDLFQSC*WIVPGA
Trigger: AGCTCCAGGAACAATCCAGCAACAGCTCTGGAAAAG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGGTGTGATTTGGTCCTaGATTAGCAACTGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLGVIWS*ISNWWV
Trigger: TACCCACCAGTTGCTAATGCAGGACCAAATCACACC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGGTGTGATTTGGTCCTaGATTAGCAACTGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDGVIWS*ISNWWV
Trigger: TACCCACCAGTTGCTAATGCAGGACCAAATCACACC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCTTCAGAAGGCAACCTaGTGTATCAACCCTCAAGAC +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLLQKAT*CINPQD
Trigger: GTCTTGAGGGTTGATACAGCAGGTTGCCTTCTGAAG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTGCTCTGTGCTTCGGTaGTTGATACCATATTTGGGC +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLCSVLR*LIPYLG
Trigger: GCCCAAATATGGTATCAAGCACCGAAGCACAGAGCA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGGCTGCTGTCCCCTATaGCAGAAATTCACATTTGCA +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLGCCPL*QKFTFA
Trigger: TGCAAATGTGAATTTCTGGCATAGGGGACAGCAGCC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTAGTTATGGTGTGATTTaGTCCTGCATTAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSSYGVI*SCISNW
Trigger: CCAGTTGCTAATGCAGGACCAAATCACACCATAACT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCAGTTATGGTGTGATTTaGTCCTGCATTAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRSYGVI*SCISNW
Trigger: CCAGTTGCTAATGCAGGACCAAATCACACCATAACT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCTGGCACTCCTGCCCTaGTGTTTAAATACCTTGCTT +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLLALLP*CLNTLL
Trigger: AAGCAAGGTATTTAAACACCAGGGCAGGAGTGCCAG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCAATAGAACTTTCAGGTaGCCCAAAAGTTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRNRTFR*PKSSTR
Trigger: TCTGGTGGAACTTTTGGGCCACCTGAAAGTTCTATT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTAATAGAACTTTCAGGTaGCCCAAAAGTTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSNRTFR*PKSSTR
Trigger: TCTGGTGGAACTTTTGGGCCACCTGAAAGTTCTATT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGGCAAAGTTATGGTGTaGTTTGGTCCTGCATTAGCA +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDGKVMV*FGPALA
Trigger: TGCTAATGCAGGACCAAATCACACCATAACTTTGCC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGGTTTCCATTCAAAGTaGTGGAGTTTTGGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLGFHSK*WSFGAK
Trigger: CTTTGCCCCAAAACTCCATCACTTTGAATGGAAACC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGGTTTCCATTCAAAGTaGTGGAGTTTTGGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDGFHSK*WSFGAK
Trigger: CTTTGCCCCAAAACTCCATCACTTTGAATGGAAACC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTTCTCCATCCATAAGTaGGAGCAAATGCAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLFSIHK*EQMQRF
Trigger: AAAGCGCTGCATTTGCTCTCACTTATGGATGGAGAA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATTTCTCCATCCATAAGTaGGAGCAAATGCAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDFSIHK*EQMQRF
Trigger: AAAGCGCTGCATTTGCTCTCACTTATGGATGGAGAA...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATAGATGCAAAGCCAAGTaGAACCTCCTGTTAGCACAA +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDRCKAK*NLLLAQ
Trigger: TTGTGCTAACAGGAGGTTTCACTTGGCTTTGCATCT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTAGATGCAAAGCCAAGTaGAACCTCCTGTTAGCACAA +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLRCKAK*NLLLAQ
Trigger: TTGTGCTAACAGGAGGTTTCACTTGGCTTTGCATCT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCCTTCCACTTTACAATaGACTGCGCCATTATCTGTC +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLPSTLQ*TAPLSV
Trigger: GACAGATAATGGCGCAGTTCATTGTAAAGTGGAAGG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTTCTTCCTTAGCTCTTaGATGGCCAACAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLFFLSS*MANSCF
Trigger: AAAGCAGCTGTTGGCCATTCAAGAGCTAAGGAAGAA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGAATACTGCGGGAGATaGCAAAAGCACCTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLEYCGR*QKHLKA
Trigger: AGCTTTTAGGTGCTTTTGTCATCTCCCGCAGTATTC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCTGAAGAGAGTTTGGTaGAAGCTTCCTTTGATGTTT +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRLKRVW*KLPLMF
Trigger: AAACATCAAAGGAAGCTTGCACCAAACTCTCTTCAG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCTGAAGAGAGTTTGGTaGAAGCTTCCTTTGATGTTT +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSLKRVW*KLPLMF
Trigger: AAACATCAAAGGAAGCTTGCACCAAACTCTCTTCAG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTCTGGTGATCGTCACTaGTCTGGTTTCCATTCAAAG +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLSGDRH*SGFHSK
Trigger: CTTTGAATGGAAACCAGAGCAGTGACGATCACCAGA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCACTTTACAATGAACTaGGCCATTATCTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSHFTMN*AIICPL
Trigger: CAAAGGACAGATAATGGCGCAGTTCATTGTAAAGTG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCACTTTACAATGAACTaGGCCATTATCTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRHFTMN*AIICPL
Trigger: CAAAGGACAGATAATGGCGCAGTTCATTGTAAAGTG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCTTCTTCATCAGCAATaGATTCCTAGTTTTCCCATG +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRLLHQQ*IPSFPM
Trigger: CATGGGAAAACTAGGAATGCATTGCTGATGAAGAAG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTTTAGGAGCCAGATTTaGCCTCAAGAACTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLFRSQI*PQELWS
Trigger: TGACCACAGTTCTTGAGGCCAAATCTGGCTCCTAAA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCACCTTGGTAGTCTGTaGGGTGGCTTATTAAATTCC +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLHLGSL*GGLLNS
Trigger: GGAATTTAATAAGCCACCCCACAGACTACCAAGGTG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGGTAGCACTTTCCACTaGGAAGATCAGCTCTTTATC +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLGSTFH*EDQLFI
Trigger: GATAAAGAGCTGATCTTCCCAGTGGAAAGTGCTACC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTATTCATGGAAACCTTTaGATTCCCTCTCTCCATCTT +
Preference number: 4 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSIHGNL*IPSLHL
Trigger: AAGATGGAGAGAGGGAATCCAAAGGTTTCCATGAAT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATACACATCTAACCCACTaGGGAAGAAGGTCAATGAAC +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDTHLTH*GRRSMN
Trigger: GTTCATTGACCTTCTTCCCCAGTGGGTTAGATGTGT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCTATGTCAAGTTATTTTaGAAAGTACCTGTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRYVKLF*KVPVGD
Trigger: GTCCCCGACAGGTACTTTCCAAAATAACTTGACATA...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATTGTTCTGATGAGAAATaGGGTGACAAGACAGGACTC +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDCSDEK*GDKTGL
Trigger: GAGTCCTGTCTTGTCACCCCATTTCTCATCAGAACA...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCACCATGAAGAATGCTaGTTGGTCATTCCATCTCGT +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLHHEEC*LVIPSR
Trigger: ACGAGATGGAATGACCAACCAGCATTCTTCATGGTG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCACCATGAAGAATGCTaGTTGGTCATTCCATCTCGT +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDHHEEC*LVIPSR
Trigger: ACGAGATGGAATGACCAACCAGCATTCTTCATGGTG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTGCATTGCAGATAAATaGAGGTATGGCGTCTGTACT +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLCIADK*RYGVCT
Trigger: AGTACAGACGCCATACCTTCATTTATCTGCAATGCA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGTCATCAGTAGACCTTaGACCATCCAAAGTAATGGA +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLVISRP*TIQSNG
Trigger: TCCATTACTTTGGATGGTTCAAGGTCTACTGATGAC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATAGGAAGCTCCATTTCTaGTGGAACCATTCATGGAAA +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDRKLHF*WNHSWK
Trigger: TTTCCATGAATGGTTCCATCAGAAATGGAGCTTCCT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCCATTATCTGTCCTTTaGGCAATAACTGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLPLSVL*AITEGS
Trigger: GCTTCCTTCAGTTATTGCTCAAAGGACAGATAATGG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGGGGAAGAAGGTCAATaGACTATTCTAAAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLGEEGQ*TILKEW
Trigger: CCACTCTTTTAGAATAGTTCATTGACCTTCTTCCCC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCAGATTCTAGGCTTATaGAGCTCAATACTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRQILGL*SSILVK
Trigger: TTTAACCAGTATTGAGCTTCATAAGCCTAGAATCTG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTAGTTATGGTGTGATTTaGTCCTGCATTAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLSYGVI*SCISNW
Trigger: CCAGTTGCTAATGCAGGACCAAATCACACCATAACT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGGAGACCAGTCACAGTaGCTATTGCTTTGTCAATAT +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDGDQSQ*LLLCQY
Trigger: ATATTGACAAAGCAATAGCCACTGTGACTGGTCTCC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGTACTGCTTTGTGGGTaGGAATGTTTTAATTGTCTT +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRVLLCG*ECFNCL
Trigger: AAGACAATTAAAACATTCCCACCCACAAAGCAGTAC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATATGAAGAATGCTGGTTaGTCATTCCATCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDMKNAG*SFHLVL
Trigger: AAGCACGAGATGGAATGACCAACCAGCATTCTTCAT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGGTTTCCAAGTTAGGTaGAATGACTGCATTGGAATA +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLGFQVR*NDCIGI
Trigger: TATTCCAATGCAGTCATTTCACCTAACTTGGAAACC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGGTTTCCAAGTTAGGTaGAATGACTGCATTGGAATA +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDGFQVR*NDCIGI
Trigger: TATTCCAATGCAGTCATTTCACCTAACTTGGAAACC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTAAGTCTTCTCTTCTATaGAGGGCCCGTTTATTTCTT +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLKSSLL*RARLFL
Trigger: AAGAAATAAACGGGCCCTTCATAGAAGAGAAGACTT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCACTACTGTGATGTTTaGTTTCCCAGAGATTCAAGA +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLHYCDV*FPRDSR
Trigger: TCTTGAATCTCTGGGAAATCAAACATCACAGTAGTG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCACTACTGTGATGTTTaGTTTCCCAGAGATTCAAGA +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDHYCDV*FPRDSR
Trigger: TCTTGAATCTCTGGGAAATCAAACATCACAGTAGTG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCAGTCACAGTGGCTATTaGTTTGTCAATATTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRSHSGY*FVNIFH
Trigger: ATGGAAAATATTGACAAAGCAATAGCCACTGTGACT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCACTTTACAATGAACTaGGCCATTATCTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDHFTMN*AIICPL
Trigger: CAAAGGACAGATAATGGCGCAGTTCATTGTAAAGTG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCTTCTTCATCAGCAATaGATTCCTAGTTTTCCCATG +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDLLHQQ*IPSFPM
Trigger: CATGGGAAAACTAGGAATGCATTGCTGATGAAGAAG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCTTCTTCATCAGCAATaGATTCCTAGTTTTCCCATG +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLLLHQQ*IPSFPM
Trigger: CATGGGAAAACTAGGAATGCATTGCTGATGAAGAAG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR TCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCAGATTCTAGGCTTATaGAGCTCAATACTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDQILGL*SSILVK
Trigger: TTTAACCAGTATTGAGCTTCATAAGCCTAGAATCTG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR GCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCCAGAAATTCACATTTaGATGCAAACAACCATAACC +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDPEIHI*MQTTIT
Trigger: GGTTATGGTTGTTTGCATGCAAATGTGAATTTCTGG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGTACTGCTTTGTGGGTaGGAATGTTTTAATTGTCTT +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDVLLCG*ECFNCL
Trigger: AAGACAATTAAAACATTCCCACCCACAAAGCAGTAC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGCATTTAATGTAAACTaGGGATCCGTTTACATTAGA +
Preference number: 4 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDAFNVN*GSVYIR
Trigger: TCTAATGTAAACGGATCCCCAGTTTACATTAAATGC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CCA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGCATTTAATGTAAACTaGGGATCCGTTTACATTAGA +
Preference number: 4 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLAFNVN*GSVYIR
Trigger: TCTAATGTAAACGGATCCCCAGTTTACATTAAATGC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS CCA 90 bp CGCTGCCCGGCAGTAGGCCCCAGTCCGTGTACTCGGCACTCCCTCTaGGCTCCTGCTTGCCACTGGGTTGCAAGAGGTCCTTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: RCPAVGPSPCTRHSL*APACHWVARGPSPA
Trigger: AGCTGGAGAAGGACCTCTTGCAACCCAGTGGCAAGCAGGAGCCCAGAGGGAGTGCCGAGTACACGGACTGGGGCCTACTGCCGGGCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS TCA 90 bp ACTGCTGGCGACACTGAAGCTCGCCCCATGCGTTGCTGCTGGCCCTaGGCATCACTCGCCGTCCCACTTGTTCCTCCTCGTCGTCATCGC +
Preference number: 5 (lower is better)
Translates to: TAGDTEARPMRCCWP*ASLAVPLVPPRRHR
Trigger: GCGATGACGACGAGGAGGAACAAGTGGGACGGCGAGTGATGCTCAGGGCCAGCAGCAACGCATGGGGCGAGCTTCAGTGTCGCCAGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGACAGGTGGAGCAAGGTaGCACCCCCGGGGGATCCCC +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLTGGAR*HPRGIP
Trigger: GGGGATCCCCCGGGGGTGCAACCTTGCTCCACCTGT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS TCA 90 bp TCTGGCTGCACTTCCACAGTGGCAGTGTCTGTGTCCGAGGCCCCCTaGCTGTCGGTGACTCGCAAGTGGAAAGTGTACACCCCCTCCACC +
Preference number: 5 (lower is better)
Translates to: SGCTSTVAVSVSEAP*LSVTRKWKVYTPST
Trigger: GGTGGAGGGGGTGTACACTTTCCACTTGCGAGTCACCGACAGTCAGGGGGCCTCGGACACAGACACTGCCACTGTGGAAGTGCAGCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS TCA 90 bp GCTCTGGGAAGTAGATACCGTACCTGTGGTCACTGCTGGCGACACTaGAGCTCGCCCCATGCGTTGCTGCTGGCCCTGAGCATCACTCGC +
Preference number: 5 (lower is better)
Translates to: ALGSRYRTCGHCWRH*SSPHALLLALSITR
Trigger: GCGAGTGATGCTCAGGGCCAGCAGCAACGCATGGGGCGAGCTTCAGTGTCGCCAGCAGTGACCACAGGTACGGTATCTACTTCCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS GCA 90 bp CCTCAAGAACTGTGGTCACTGCTGGCGACACTGAAGCTCGCCCCATaGGTTGCTGCTGGCCCTGAGCATCACTCGCCGTCCCACTTGTTC +
Preference number: 5 (lower is better)
Translates to: PQELWSLLATLKLAP*VAAGPEHHSPSHLF
Trigger: GAACAAGTGGGACGGCGAGTGATGCTCAGGGCCAGCAGCAACGCATGGGGCGAGCTTCAGTGTCGCCAGCAGTGACCACAGTTCTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS GCA 90 bp ATACCGTACCTGTGGTCACTGCTGGCGACACTGAAGCTCGCCCCATaGGTTGCTGCTGGCCCTGAGCATCACTCGCCGTCCCACTTGTTC +
Preference number: 5 (lower is better)
Translates to: IPYLWSLLATLKLAP*VAAGPEHHSPSHLF
Trigger: GAACAAGTGGGACGGCGAGTGATGCTCAGGGCCAGCAGCAACGCATGGGGCGAGCTTCAGTGTCGCCAGCAGTGACCACAGGTACGGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS CCA 90 bp CCCAGTCCGTGTACTCGGCACTCCCTCTGGGCTCCTGCTTGCCACTaGGTTGCAAGAGGTCCTTCTCCAGCTCCCGGTAGTCATCTGAGT +
Preference number: 5 (lower is better)
Translates to: PSPCTRHSLWAPACH*VARGPSPAPGSHLS
Trigger: ACTCAGATGACTACCGGGAGCTGGAGAAGGACCTCTTGCAACCCAGTGGCAAGCAGGAGCCCAGAGGGAGTGCCGAGTACACGGACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS CCA 90 bp CGACTCATTCAGGTAATGGAGCTCAGGGTCCTGCTGCGTCTCCGCTaGCACCGCAGGACTGTCTCCAACAGAGGAGTTGAAGGCCCCCTC +
Preference number: 5 (lower is better)
Translates to: RLIQVMELRVLLRLR*HRRTVSNRGVEGPL
Trigger: GAGGGGGCCTTCAACTCCTCTGTTGGAGACAGTCCTGCGGTGCCAGCGGAGACGCAGCAGGACCCTGAGCTCCATTACCTGAATGAGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGTCTCCAACAGAGGAGTaGAAGGCCCCCTCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLSPTEE*KAPSLP
Trigger: GGGCAGCGAGGGGGCCTTCAACTCCTCTGTTGGAGA...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTACAGGTGGAGCAAGGTaGCACCCCCGGGGGATCCCC +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFTGGAR*HPRGIP
Trigger: GGGGATCCCCCGGGGGTGCAACCTTGCTCCACCTGT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGAGCTCGCCCCATGCGTaGCTGCTGGCCCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPSSPHA*LLALSI
Trigger: GATGCTCAGGGCCAGCAGCAACGCATGGGGCGAGCT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS GCA 90 bp TGGACCTTAATGTCCGAGTCCAGCACGTTCAGCAGCACAGCCAGCTaGCTCACAAGGGTGTCCTTCCGCTGCTCTGTCAGCTGCCCAACA +
Preference number: 5 (lower is better)
Translates to: WTLMSESSTFSSTAS*LTRVSFRCSVSCPT
Trigger: TGTTGGGCAGCTGACAGAGCAGCGGAAGGACACCCTTGTGAGGCAGCTGGCTGTGCTGCTGAACGTGCTGGACTCGGACATTAAGGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTACAGGTGGAGCAAGGTaGCACCCCCGGGGGATCCCC +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACTGGAR*HPRGIP
Trigger: GGGGATCCCCCGGGGGTGCAACCTTGCTCCACCTGT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTAGCTCGCCCCATGCGTaGCTGCTGGCCCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFSSPHA*LLALSI
Trigger: GATGCTCAGGGCCAGCAGCAACGCATGGGGCGAGCT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAAGCTCGCCCCATGCGTaGCTGCTGGCCCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRSSPHA*LLALSI
Trigger: GATGCTCAGGGCCAGCAGCAACGCATGGGGCGAGCT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCTGCTTGCCACTGGGTaGCAAGAGGTCCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLLLATG*QEVLLQ
Trigger: CTGGAGAAGGACCTCTTGCAACCCAGTGGCAAGCAG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCCTCTGGGCTCCTGCTaGCCACTGGGTTGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPPLGSC*PLGCKR
Trigger: CCTCTTGCAACCCAGTGGCAAGCAGGAGCCCAGAGG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATCTCCAACAGAGGAGTaGAAGGCCCCCTCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQSPTEE*KAPSLP
Trigger: GGGCAGCGAGGGGGCCTTCAACTCCTCTGTTGGAGA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGACCATCAGGCTGGAGTaGTGCTCTGTGCTTCGGTGC +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLTIRLE*CSVLRC
Trigger: GCACCGAAGCACAGAGCACAACTCCAGCCTGATGGT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS CCA 90 bp AACCTGCAATTGTCACCAGCAGCAGCAATGAAGAGAGCACACCTGTaGGGGGCGCCATTGTGCACCACACAGTGGGTGATGGCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: NLQLSPAAAMKRAHL*GAPLCTTQWVMAGF
Trigger: GAAGCCTGCCATCACCCACTGTGTGGTGCACAATGGCGCCCCCCACAGGTGTGCTCTCTTCATTGCTGCTGCTGGTGACAATTGCAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378214.8
ENST00000537886.5
CDS CCA 90 bp GTGTACACCCCCTCCACCAGATTCGTAAGCTGCAGAGCCACACTGTaGTCAGAGCCATCGATGACATCTCCAGCTGCTGGACTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: VYTPSTRFVSCRATL*SEPSMTSPAAGLWP
Trigger: TGGCCAGAGTCCAGCAGCTGGAGATGTCATCGATGGCTCTGACCACAGTGTGGCTCTGCAGCTTACGAATCTGGTGGAGGGGGTGTACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS CCA 90 bp CCTGCCTACTGGCTGCCCTCTTTCCTATTTCTCGGCCAGGCGCTCTaGGAAGTAGATACCGTACCTGTGGTCACTGCTGGCGACACTGAA +
Preference number: 5 (lower is better)
Translates to: PAYWLPSFLFLGQAL*EVDTVPVVTAGDTE
Trigger: TTCAGTGTCGCCAGCAGTGACCACAGGTACGGTATCTACTTCCCAGAGCGCCTGGCCGAGAAATAGGAAAGAGGGCAGCCAGTAGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACCTCTGGGCTCCTGCTaGCCACTGGGTTGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTPLGSC*PLGCKR
Trigger: CCTCTTGCAACCCAGTGGCAAGCAGGAGCCCAGAGG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATCTCCAACAGAGGAGTaGAAGGCCCCCTCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTSPTEE*KAPSLP
Trigger: GGGCAGCGAGGGGGCCTTCAACTCCTCTGTTGGAGA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGTCTCCAACAGAGGAGTaGAAGGCCCCCTCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQSPTEE*KAPSLP
Trigger: GGGCAGCGAGGGGGCCTTCAACTCCTCTGTTGGAGA...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGCCACTTCAGCAGCTTaGAGAACCTTGAAAGGCGGC +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLATSAA*RTLKGG
Trigger: GCCGCCTTTCAAGGTTCTCAAAGCTGCTGAAGTGGC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS CCA 90 bp AAACTGCAATTGTCACCAGCAGCAGCAATGAAGAGAGCACACCTGTaGGGGGCGCCATTGTGCACCACACAGTGGGTGATGGCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: KLQLSPAAAMKRAHL*GAPLCTTQWVMAGF
Trigger: GAAGCCTGCCATCACCCACTGTGTGGTGCACAATGGCGCCCCCCACAGGTGTGCTCTCTTCATTGCTGCTGCTGGTGACAATTGCAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535378.5
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCACTCGCCGTCCCACTaGTTCCTCCTCGTCGTCATC +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFHSPSH*FLLVVI
Trigger: GATGACGACGAGGAGGAACAAGTGGGACGGCGAGTG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGCACTCGCCGTCCCACTaGTTCCTCCTCGTCGTCATC +
Preference number: 5 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQHSPSH*FLLVVI
Trigger: GATGACGACGAGGAGGAACAAGTGGGACGGCGAGTG...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAACCATCAGGCTGGAGTaGTGCTCTGTGCTTCGGTGC +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQTIRLE*CSVLRC
Trigger: GCACCGAAGCACAGAGCACAACTCCAGCCTGATGGT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGACCATCAGGCTGGAGTaGTGCTCTGTGCTTCGGTGC +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPTIRLE*CSVLRC
Trigger: GCACCGAAGCACAGAGCACAACTCCAGCCTGATGGT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGGCACTGTGCGAGTGTaGCCGTCAGCACAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: QKACYMQDSVPPQMARASGTVRV*PSAQKA
Trigger: AGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCCGATGACTTTACATTaGGGCTGCTGTCCCCTATGC +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLPMTLH*GCCPLC
Trigger: GCATAGGGGACAGCAGCCCAAATGTAAAGTCATCGG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGCTGTAGGCCACAGTTaGCTGACCTATACTCAAGGG +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLAVGHS*LTYTQG
Trigger: CCCTTGAGTATAGGTCAGCAAACTGTGGCCTACAGC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGGCTCACAGTTCTCTTaGTGGGGGCAGCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACGSQFS*WGQLTR
Trigger: CCTGGTGAGCTGCCCCCACAAAGAGAACTGTGAGCC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACTGCTTGCCACTGGGTaGCAAGAGGTCCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTLLATG*QEVLLQ
Trigger: CTGGAGAAGGACCTCTTGCAACCCAGTGGCAAGCAG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGCTACAGGTGGCAGGTaGACTCTTCTGGCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: QKACYMQDSVPPQMARASATGGR*TLLAGL
Trigger: TAAGCCTGCCAGAAGAGTCAACCTGCCACCTGTAGC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGCTACAGGTGGCAGGTaGACTCTTCTGGCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQATGGR*TLLAGL
Trigger: TAAGCCTGCCAGAAGAGTCAACCTGCCACCTGTAGC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAGTGAGCTCTTGCAGTaGGGGAGAAACAACTGCTAC +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLSELLQ*GRNNCY
Trigger: GTAGCAGTTGTTTCTCCCCAACTGCAAGAGCTCACT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGCAGCTTTGAGAACCTaGAAAGGCGGCCTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPAALRT*KGGLLC
Trigger: ACAGAGCAGGCCGCCTTTCAAGGTTCTCAAAGCTGC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGACCATCAGGCTGGAGTaGTGCTCTGTGCTTCGGTGC +
Preference number: 5 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQTIRLE*CSVLRC
Trigger: GCACCGAAGCACAGAGCACAACTCCAGCCTGATGGT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAAAAAACCAGGAGGGCTaGGCACTGTGCGAGTGTTGC +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQKNQEG*ALCECC
Trigger: GCAACACTCGCACAGTGCCAAGCCCTCCTGGTTTTT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAAGTTCCACCAGAATTaGCCCTCCATCCATCAAGGC +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLKFHQN*PSIHQG
Trigger: GCCTTGATGGATGGAGGGCAAATTCTGGTGGAACTT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS GCA 90 bp ACTCGCAAGTGGAAAGTGTACACCCCCTCCACCAGATTCGTAAGCTaGAGAGCCACACTGTGGTCAGAGCCATCGATGACATCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: TRKWKVYTPSTRFVS*RATLWSEPSMTSPA
Trigger: AGCTGGAGATGTCATCGATGGCTCTGACCACAGTGTGGCTCTGCAGCTTACGAATCTGGTGGAGGGGGTGTACACTTTCCACTTGCGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS GCA 90 bp TCTGAACTCAGGGCGTCTCGATTCTACTTTTGTTGGGTATTGGCCTaGCTACTGGCTGCCCTCTTTCCTATTTCTCGGCCAGGCGCTCTG +
Preference number: 5 (lower is better)
Translates to: SELRASRFYFCWVLA*LLAALFPISRPGAL
Trigger: CAGAGCGCCTGGCCGAGAAATAGGAAAGAGGGCAGCCAGTAGGCAGGCCAATACCCAACAAAAGTAGAATCGAGACGCCCTGAGTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS CCA 90 bp TCAGGGCGTCTCGATTCTACTTTTGTTGGGTATTGGCCTGCCTACTaGCTGCCCTCTTTCCTATTTCTCGGCCAGGCGCTCTGGGAAGTA +
Preference number: 5 (lower is better)
Translates to: SGRLDSTFVGYWPAY*LPSFLFLGQALWEV
Trigger: TACTTCCCAGAGCGCCTGGCCGAGAAATAGGAAAGAGGGCAGCCAGTAGGCAGGCCAATACCCAACAAAAGTAGAATCGAGACGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS-3UTR CAA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGGGCACAACCTGCAATaGTCACCAGCAGCAGCAATG +
Preference number: 5 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQGHNLQ*SPAAAM
Trigger: CATTGCTGCTGCTGGTGACAATTGCAGGTTGTGCCC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378214.8
ENST00000537886.5
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAATGGGGCCCATCTTCTaGGGCTCACAGTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQMGPIF*GSQFSL
Trigger: CAAAGAGAACTGTGAGCCCAAGAAGATGGGCCCCAT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGCTACAGGTGGCAGGTaGACTCTTCTGGCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTATGGR*TLLAGL
Trigger: TAAGCCTGCCAGAAGAGTCAACCTGCCACCTGTAGC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAGCTACAGGTGGCAGGTaGACTCTTCTGGCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRATGGR*TLLAGL
Trigger: TAAGCCTGCCAGAAGAGTCAACCTGCCACCTGTAGC...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAGTATCATCTGTACTTaGGCTGCCATCAATGAGGGC +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLSIICT*AAINEG
Trigger: GCCCTCATTGATGGCAGCCAAAGTACAGATGATACT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGCAGCTTTGAGAACCTaGAAAGGCGGCCTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTAALRT*KGGLLC
Trigger: ACAGAGCAGGCCGCCTTTCAAGGTTCTCAAAGCTGC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAAGTCAGCCTTCTCCTTaGAGAGCCGCATGTGCAGAT +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQSQPSP*RAACAD
Trigger: ATCTGCACATGCGGCTCTCAAAGGAGAAGGCTGACT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGAGTCAGCCTTCTCCTTaGAGAGCCGCATGTGCAGAT +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPSQPSP*RAACAD
Trigger: ATCTGCACATGCGGCTCTCAAAGGAGAAGGCTGACT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGGCACTGTGCGAGTGTaGCCGTCAGCACAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACGTVRV*PSAQKA
Trigger: AGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTAAAAACCAGGAGGGCTaGGCACTGTGCGAGTGTTGC +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFKNQEG*ALCECC
Trigger: GCAACACTCGCACAGTGCCAAGCCCTCCTGGTTTTT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCCGATGACTTTACATTaGGGCTGCTGTCCCCTATGC +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPPMTLH*GCCPLC
Trigger: GCATAGGGGACAGCAGCCCAAATGTAAAGTCATCGG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTTGGAGCCACTACTTCTaGGCCATGACCTCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFWSHYF*AMTSGK
Trigger: CTTCCCAGAGGTCATGGCCAAGAAGTAGTGGCTCCA...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATGGAGCCACTACTTCTaGGCCATGACCTCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRWSHYF*AMTSGK
Trigger: CTTCCCAGAGGTCATGGCCAAGAAGTAGTGGCTCCA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS CCA 90 bp AACCTTCTGAACTCAGGGCGTCTCGATTCTACTTTTGTTGGGTATTaGCCTGCCTACTGGCTGCCCTCTTTCCTATTTCTCGGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: NLLNSGRLDSTFVGY*PAYWLPSFLFLGQA
Trigger: CGCCTGGCCGAGAAATAGGAAAGAGGGCAGCCAGTAGGCAGGCCAATACCCAACAAAAGTAGAATCGAGACGCCCTGAGTTCAGAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS CCA 90 bp CGGGCACAACCTTCTGAACTCAGGGCGTCTCGATTCTACTTTTGTTaGGTATTGGCCTGCCTACTGGCTGCCCTCTTTCCTATTTCTCGG +
Preference number: 5 (lower is better)
Translates to: RAQPSELRASRFYFC*VLACLLAALFPISR
Trigger: CCGAGAAATAGGAAAGAGGGCAGCCAGTAGGCAGGCCAATACCCAACAAAAGTAGAATCGAGACGCCCTGAGTTCAGAAGGTTGTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAATGGGGCCCATCTTCTaGGGCTCACAGTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRMGPIF*GSQFSL
Trigger: CAAAGAGAACTGTGAGCCCAAGAAGATGGGCCCCAT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATCTAGGCCCCAATCTTaGCCTAGAAAGGTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQSRPQS*PRKVKS
Trigger: GGACTTGACCTTTCTAGGCAAAGATTGGGGCCTAGA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAAGAGCTGTTGCTGGATaGTTCCTGGAGCTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRRAVAG*FLELRS
Trigger: GCTTCTCAGCTCCAGGAACAATCCAGCAACAGCTCT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTAGAGCTGTTGCTGGATaGTTCCTGGAGCTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFRAVAG*FLELRS
Trigger: GCTTCTCAGCTCCAGGAACAATCCAGCAACAGCTCT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAAGAGCTGTTGCTGGATaGTTCCTGGAGCTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTRAVAG*FLELRS
Trigger: GCTTCTCAGCTCCAGGAACAATCCAGCAACAGCTCT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATCTTTTCCAGAGCTGTaGCTGGATTGTTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQSFPEL*LDCSWS
Trigger: GCTCCAGGAACAATCCAGCAACAGCTCTGGAAAAGA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGATTCATAGTTGTAGGTaGTTTCTACAGGTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLIHSCR*FLQVAL
Trigger: CAGCGCCACCTGTAGAAACAACCTACAACTATGAAT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTAGTGAGCTCTTGCAGTaGGGGAGAAACAACTGCTAC +
Preference number: 5 (lower is better)
Translates to: QKACYMQDSVPPQMARASSELLQ*GRNNCY
Trigger: GTAGCAGTTGTTTCTCCCCAACTGCAAGAGCTCACT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAAGGCAAAGTGAGCTCTaGCAGTTGGGGAGAAACAAC +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQRQSEL*QLGRNN
Trigger: GTTGTTTCTCCCCAACTGCAAGAGCTCACTTTGCCT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGCCACTGGAGGTCTATaGTTTTCAGGCTGGACAATC +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQATGGL*FSGWTI
Trigger: GATTGTCCAGCCTGAAAACAATAGACCTCCAGTGGC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGCCACTGGAGGTCTATaGTTTTCAGGCTGGACAATC +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPATGGL*FSGWTI
Trigger: GATTGTCCAGCCTGAAAACAATAGACCTCCAGTGGC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGCCACTTCAGCAGCTTaGAGAACCTTGAAAGGCGGC +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACATSAA*RTLKGG
Trigger: GCCGCCTTTCAAGGTTCTCAAAGCTGCTGAAGTGGC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTCTGTGCTTCGGTGCTaGATACCATATTTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPSVLRC*IPYLGL
Trigger: GAGGCCCAAATATGGTATCAAGCACCGAAGCACAGA...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGTCAGCACAGAAAGCTaGCTACATGCAAGACTCCGT +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQVSTES*LHARLR
Trigger: ACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCCGATGACTTTACATTaGGGCTGCTGTCCCCTATGC +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFPMTLH*GCCPLC
Trigger: GCATAGGGGACAGCAGCCCAAATGTAAAGTCATCGG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCAAGGCAGGAGTTCTTaGTTTAGTGGAAAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLQGRSS*FSGKQN
Trigger: GTTCTGCTTTCCACTAAACAAAGAACTCCTGCCTTG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTAAGTTCCACCAGAATTaGCCCTCCATCCATCAAGGC +
Preference number: 5 (lower is better)
Translates to: QKACYMQDSVPPQMARASKFHQN*PSIHQG
Trigger: GCCTTGATGGATGGAGGGCAAATTCTGGTGGAACTT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGGGCATCACTGGCTTGTaGAGTGGTACATTTTCTTAC +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLGITGL*SGTFSY
Trigger: GTAAGAAAATGTACCACTCAACAAGCCAGTGATGCC...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGCTGTAGGCCACAGTTaGCTGACCTATACTCAAGGG +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTAVGHS*LTYTQG
Trigger: CCCTTGAGTATAGGTCAGCAAACTGTGGCCTACAGC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAGCTGTAGGCCACAGTTaGCTGACCTATACTCAAGGG +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRAVGHS*LTYTQG
Trigger: CCCTTGAGTATAGGTCAGCAAACTGTGGCCTACAGC...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGTTAAAAACAATGCATTaGACAGGCCACAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLLKTMH*TGHRSQ
Trigger: CTGGGACCTGTGGCCTGTCAAATGCATTGTTTTTAA...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616673.4
CDS GCA 90 bp TGGCTGCCATCAATGAGGGCTGACGTCAAAGGCAAAGTGAGCTCTTaGAGTTGGGGAGAAACAACTGCTACAGGTGGCAGGTTGACTCTT +
Preference number: 5 (lower is better)
Translates to: WLPSMRADVKGKVSS*SWGETTATGGRLTL
Trigger: AAGAGTCAACCTGCCACCTGTAGCAGTTGTTTCTCCCCAACTGCAAGAGCTCACTTTGCCTTTGACGTCAGCCCTCATTGATGGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS GCA 90 bp TGGTCACTGTCAAACTCAGACTCGGATACCATCAGGCTGGAGTTGTaGTCTGTGCTTCGGTGCTTGATACCACAGTTGCTCTCTCCATCC +
Preference number: 5 (lower is better)
Translates to: WSLSNSDSDTIRLEL*SVLRCLIPQLLSPS
Trigger: GGATGGAGAGAGCAACTGTGGTATCAAGCACCGAAGCACAGAGCACAACTCCAGCCTGATGGTATCCGAGTCTGAGTTTGACAGTGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537886.5
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAGGCCCTGAAGAGAGTTaGGTGCAAGCTTCCTTTGAT +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRGPEES*VQASFD
Trigger: ATCAAAGGAAGCTTGCACCAAACTCTCTTCAGGGCC...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGGCCCTGAAGAGAGTTaGGTGCAAGCTTCCTTTGAT +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTGPEES*VQASFD
Trigger: ATCAAAGGAAGCTTGCACCAAACTCTCTTCAGGGCC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTATGGGGCCCATCTTCTaGGGCTCACAGTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACMGPIF*GSQFSL
Trigger: CAAAGAGAACTGTGAGCCCAAGAAGATGGGCCCCAT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTTCTAGGCCCCAATCTTaGCCTAGAAAGGTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFSRPQS*PRKVKS
Trigger: GGACTTGACCTTTCTAGGCAAAGATTGGGGCCTAGA...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAGAGCTGTTGCTGGATaGTTCCTGGAGCTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACRAVAG*FLELRS
Trigger: GCTTCTCAGCTCCAGGAACAATCCAGCAACAGCTCT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACATCTTTTCCAGAGCTGTaGCTGGATTGTTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTSFPEL*LDCSWS
Trigger: GCTCCAGGAACAATCCAGCAACAGCTCTGGAAAAGA...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAAGTGAGCTCTTGCAGTaGGGGAGAAACAACTGCTAC +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTSELLQ*GRNNCY
Trigger: GTAGCAGTTGTTTCTCCCCAACTGCAAGAGCTCACT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGAGTGAGCTCTTGCAGTaGGGGAGAAACAACTGCTAC +
Preference number: 5 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQSELLQ*GRNNCY
Trigger: GTAGCAGTTGTTTCTCCCCAACTGCAAGAGCTCACT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAAGGCAAAGTGAGCTCTaGCAGTTGGGGAGAAACAAC +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTRQSEL*QLGRNN
Trigger: GTTGTTTCTCCCCAACTGCAAGAGCTCACTTTGCCT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTAGGCAAAGTGAGCTCTaGCAGTTGGGGAGAAACAAC +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFRQSEL*QLGRNN
Trigger: GTTGTTTCTCCCCAACTGCAAGAGCTCACTTTGCCT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGAGGCAAAGTGAGCTCTaGCAGTTGGGGAGAAACAAC +
Preference number: 5 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQRQSEL*QLGRNN
Trigger: GTTGTTTCTCCCCAACTGCAAGAGCTCACTTTGCCT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAAGTATCATCTGTACTTaGGCTGCCATCAATGAGGGC +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQSIICT*AAINEG
Trigger: GCCCTCATTGATGGCAGCCAAAGTACAGATGATACT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGAGTATCATCTGTACTTaGGCTGCCATCAATGAGGGC +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPSIICT*AAINEG
Trigger: GCCCTCATTGATGGCAGCCAAAGTACAGATGATACT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAGCCACTGGAGGTCTATaGTTTTCAGGCTGGACAATC +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTATGGL*FSGWTI
Trigger: GATTGTCCAGCCTGAAAACAATAGACCTCCAGTGGC...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAGCCACTGGAGGTCTATaGTTTTCAGGCTGGACAATC +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRATGGL*FSGWTI
Trigger: GATTGTCCAGCCTGAAAACAATAGACCTCCAGTGGC...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAGTCAGCCTTCTCCTTaGAGAGCCGCATGTGCAGAT +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACSQPSP*RAACAD
Trigger: ATCTGCACATGCGGCTCTCAAAGGAGAAGGCTGACT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGATACTCCACTCACAGTaGCTCTCTCCATCCCAGATA +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPILHSQ*LSPSQI
Trigger: TATCTGGGATGGAGAGAGCAACTGTGAGTGGAGTAT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTATACTCCACTCACAGTaGCTCTCTCCATCCCAGATA +
Preference number: 5 (lower is better)
Translates to: QKACYMQDSVPPQMARASILHSQ*LSPSQI
Trigger: TATCTGGGATGGAGAGAGCAACTGTGAGTGGAGTAT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGTCTGTGCTTCGGTGCTaGATACCATATTTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQSVLRC*IPYLGL
Trigger: GAGGCCCAAATATGGTATCAAGCACCGAAGCACAGA...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGTCAGCACAGAAAGCTaGCTACATGCAAGACTCCGT +
Preference number: 5 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQVSTES*LHARLR
Trigger: ACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAGTCAGCACAGAAAGCTaGCTACATGCAAGACTCCGT +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRVSTES*LHARLR
Trigger: ACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCTATGTCAAGTTATTTaGGAAAGTACCTGTCGGGGA +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLLCQVI*ESTCRG
Trigger: TCCCCGACAGGTACTTTCCAAAATAACTTGACATAG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTAAGTTCCACCAGAATTaGCCCTCCATCCATCAAGGC +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFKFHQN*PSIHQG
Trigger: GCCTTGATGGATGGAGGGCAAATTCTGGTGGAACTT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTCATGAAGAATGCTGGTaGGTCATTCCATCTCGTGCT +
Preference number: 5 (lower is better)
Translates to: QKACYMQDSVPPQMARASHEECW*VIPSRA
Trigger: AGCACGAGATGGAATGACCAACCAGCATTCTTCATG...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAACATGAAGAATGCTGGTaGGTCATTCCATCTCGTGCT +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQHEECW*VIPSRA
Trigger: AGCACGAGATGGAATGACCAACCAGCATTCTTCATG...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGACAGCAACTAAAGTGCTaGTTAGCCTGTGAGCCCTAC +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRQQLKC*LACEPY
Trigger: GTAGGGCTCACAGGCTAACAAGCACTTTAGTTGCTG...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGGTGGCATCACTGGCTaGTTGAGTGGTACATTTTCT +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPGGITG*LSGTFS
Trigger: AGAAAATGTACCACTCAACAAGCCAGTGATGCCACC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGCTGTAGGCCACAGTTaGCTGACCTATACTCAAGGG +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACAVGHS*LTYTQG
Trigger: CCCTTGAGTATAGGTCAGCAAACTGTGGCCTACAGC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTTACTTTTGTTGGGTATaGGCCTGCCTACTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACYFCWV*ACLLAA
Trigger: GGCAGCCAGTAGGCAGGCCAATACCCAACAAAAGTA...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCTTGATACCACAGTaGCTCTCTCCATCCCAGATA +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPCLIPQ*LSPSQI
Trigger: TATCTGGGATGGAGAGAGCAACTGTGGTATCAAGCA...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537886.5
CDS GCA 90 bp TGGTCACTGTCAAACTCAGACTCGGATACCATCAGGCTGGAGTTGTaGTCTGTGCTTCGGTGCTTGATACCATATTTGGGCCTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: WSLSNSDSDTIRLEL*SVLRCLIPYLGLSS
Trigger: GGAACTGAGGCCCAAATATGGTATCAAGCACCGAAGCACAGAGCACAACTCCAGCCTGATGGTATCCGAGTCTGAGTTTGACAGTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCCTCTGGGCTCCTGCTaGCCACTGGGTTGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSPLGSC*PLGCKR
Trigger: CCTCTTGCAACCCAGTGGCAAGCAGGAGCCCAGAGG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTTCTTTTCCAGAGCTGTaGCTGGATTGTTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACSFPEL*LDCSWS
Trigger: GCTCCAGGAACAATCCAGCAACAGCTCTGGAAAAGA...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGATTCATAGTTGTAGGTaGTTTCTACAGGTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPIHSCR*FLQVAL
Trigger: CAGCGCCACCTGTAGAAACAACCTACAACTATGAAT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAATTCATAGTTGTAGGTaGTTTCTACAGGTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQIHSCR*FLQVAL
Trigger: CAGCGCCACCTGTAGAAACAACCTACAACTATGAAT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTTGTTTTATTTCACCTaGGTAGTCTGTGGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPLFYFT*VVCGVA
Trigger: AGCCACCCCACAGACTACCAAGGTGAAATAAAACAA...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAAGTATCATCTGTACTTaGGCTGCCATCAATGAGGGC +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRSIICT*AAINEG
Trigger: GCCCTCATTGATGGCAGCCAAAGTACAGATGATACT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTAGTATCATCTGTACTTaGGCTGCCATCAATGAGGGC +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFSIICT*AAINEG
Trigger: GCCCTCATTGATGGCAGCCAAAGTACAGATGATACT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTCAAAGTGATGGAGTTTaGGGGCAAAGTTATGGTGTG +
Preference number: 5 (lower is better)
Translates to: QKACYMQDSVPPQMARASQSDGV*GQSYGV
Trigger: CACACCATAACTTTGCCCCAAAACTCCATCACTTTG...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGCCACTGGAGGTCTATaGTTTTCAGGCTGGACAATC +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACATGGL*FSGWTI
Trigger: GATTGTCCAGCCTGAAAACAATAGACCTCCAGTGGC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGCAGTCACAGTGGCTATaGCTTTGTCAATATTTTCCA +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLQSQWL*LCQYFP
Trigger: TGGAAAATATTGACAAAGCAATAGCCACTGTGACTG...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTATACTCCACTCACAGTaGCTCTCTCCATCCCAGATA +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFILHSQ*LSPSQI
Trigger: TATCTGGGATGGAGAGAGCAACTGTGAGTGGAGTAT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTTCTGTGCTTCGGTGCTaGATACCATATTTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACSVLRC*IPYLGL
Trigger: GAGGCCCAAATATGGTATCAAGCACCGAAGCACAGA...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCATTCATGGAAACCTTaGGATTCCCTCTCTCCATCT +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPHSWKP*DSLSPS
Trigger: AGATGGAGAGAGGGAATCCAAAGGTTTCCATGAATG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGTCAGCACAGAAAGCTaGCTACATGCAAGACTCCGT +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACVSTES*LHARLR
Trigger: ACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTATTTGCATTCAGTTCTaGGAGCCACTACTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: QKACYMQDSVPPQMARASICIQF*EPLLLG
Trigger: GCCAAGAAGTAGTGGCTCCAAGAACTGAATGCAAAT...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGCAAGGCAGGAGTTCTTaGTTTAGTGGAAAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPQGRSS*FSGKQN
Trigger: GTTCTGCTTTCCACTAAACAAAGAACTCCTGCCTTG...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACATGAAGAATGCTGGTaGGTCATTCCATCTCGTGCT +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTHEECW*VIPSRA
Trigger: AGCACGAGATGGAATGACCAACCAGCATTCTTCATG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGGCATCACTGGCTTGTaGAGTGGTACATTTTCTTAC +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQGITGL*SGTFSY
Trigger: GTAAGAAAATGTACCACTCAACAAGCCAGTGATGCC...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGGTGGCATCACTGGCTaGTTGAGTGGTACATTTTCT +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFGGITG*LSGTFS
Trigger: AGAAAATGTACCACTCAACAAGCCAGTGATGCCACC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATCGATTCTACTTTTGTaGGGTATTGGCCTGCCTACT +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQSILLL*GIGLPT
Trigger: AGTAGGCAGGCCAATACCCAACAAAAGTAGAATCGA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS-3UTR CAA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGTCTCGATTCTACTTTaGTTGGGTATTGGCCTGCCT +
Preference number: 5 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQVSILL*LGIGLP
Trigger: AGGCAGGCCAATACCCAACAAAAGTAGAATCGAGAC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGATAAGCAAACTGCAATaGTCACCAGCAGCAGCAATG +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPISKLQ*SPAAAM
Trigger: CATTGCTGCTGCTGGTGACAATTGCAGTTTGCTTAT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535378.5
CDS TCA 90 bp TTGTTCCTGGAGCTGAGAAGCCTTTTCTTTCTCCAACACCTCTCCTaGAGATGGAGTAGTCGGCAAGGGAAGCAACACACTTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: LFLELRSLFFLQHLS*RWSSRQGKQHTSLR
Trigger: CCTGAGAGAAGTGTGTTGCTTCCCTTGCCGACTACTCCATCTTCAGGAGAGGTGTTGGAGAAAGAAAAGGCTTCTCAGCTCCAGGAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS TCA 90 bp ATCAACCCTCAAGACCTTGAAAAGCAAGAAGTCAGCCTTCTCCTTTaGGAGCCGCATGTGCAGATTTCGGGCCACTTCAGCAGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: INPQDLEKQEVSLLL*EPHVQISGHFSSFE
Trigger: CTCAAAGCTGCTGAAGTGGCCCGAAATCTGCACATGCGGCTCTCAAAGGAGAAGGCTGACTTCTTGCTTTTCAAGGTCTTGAGGGTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS GCA 90 bp ACCTTGAAAAGCAAGAAGTCAGCCTTCTCCTTTGAGAGCCGCATGTaGAGATTTCGGGCCACTTCAGCAGCTTTGAGAACCTTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: TLKSKKSAFSFESRM*RFRATSAALRTLKG
Trigger: GCCTTTCAAGGTTCTCAAAGCTGCTGAAGTGGCCCGAAATCTGCACATGCGGCTCTCAAAGGAGAAGGCTGACTTCTTGCTTTTCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGGCTCACAGTTCTCTTaGTGGGGGCAGCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRGSQFS*WGQLTR
Trigger: CCTGGTGAGCTGCCCCCACAAAGAGAACTGTGAGCC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGGCTCACAGTTCTCTTaGTGGGGGCAGCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSGSQFS*WGQLTR
Trigger: CCTGGTGAGCTGCCCCCACAAAGAGAACTGTGAGCC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTTTGTTTTATTTCACCTaGGTAGTCTGTGGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFLFYFT*VVCGVA
Trigger: AGCCACCCCACAGACTACCAAGGTGAAATAAAACAA...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAGTTTGCTTGTGTCCTaGTTTTATTTCACCTTGGTA +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLSLLVS*FYFTLV
Trigger: TACCAAGGTGAAATAAAACAAGGACACAAGCAAACT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGAGAGAGGTTAAGAGTTaGCTTGTGTCCTTGTTTTAT +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLREVKS*LVSLFY
Trigger: ATAAAACAAGGACACAAGCAAACTCTTAACCTCTCT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTAAGTCCGACGGACAATaGAGAGAGGTTAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFKSDGQ*REVKSL
Trigger: CAAACTCTTAACCTCTCTCAATTGTCCGTCGGACTT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAAAGTCCGACGGACAATaGAGAGAGGTTAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTKSDGQ*REVKSL
Trigger: CAAACTCTTAACCTCTCTCAATTGTCCGTCGGACTT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGGGCTTAACAGTGACATaGACAAATCCTTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPGLTVT*TNPSPK
Trigger: CTTTGGAGAAGGATTTGTCAATGTCACTGTTAAGCC...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCAAAGTGATGGAGTTTaGGGGCAAAGTTATGGTGTG +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFQSDGV*GQSYGV
Trigger: CACACCATAACTTTGCCCCAAAACTCCATCACTTTG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGCAAAGTGATGGAGTTTaGGGGCAAAGTTATGGTGTG +
Preference number: 5 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQQSDGV*GQSYGV
Trigger: CACACCATAACTTTGCCCCAAAACTCCATCACTTTG...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATTGTGCAACAGGATATaGTTTAGGTGTGCTCACACT +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQLCNRI*FRCAHT
Trigger: AGTGTGAGCACACCTAAACAATATCCTGTTGCACAA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTTGTGCAACAGGATATaGTTTAGGTGTGCTCACACT +
Preference number: 5 (lower is better)
Translates to: QKACYMQDSVPPQMARASLCNRI*FRCAHT
Trigger: AGTGTGAGCACACCTAAACAATATCCTGTTGCACAA...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTATTTGCATTCAGTTCTaGGAGCCACTACTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFICIQF*EPLLLG
Trigger: GCCAAGAAGTAGTGGCTCCAAGAACTGAATGCAAAT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGACAAGGCAGGAGTTCTTaGTTTAGTGGAAAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRQGRSS*FSGKQN
Trigger: GTTCTGCTTTCCACTAAACAAAGAACTCCTGCCTTG...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GACCCACTTTTCGGCTCATGGGGCGTGCACACACAGGCTGTAGGCCACAGTTTGATGAATCCTCCTTCATaGAATGTAAACCAGCAACTA +
Preference number: 5 (lower is better)
Translates to: DPLFGSWGVHTQAVGHSLMNPPS*NVNQQL
Trigger: TAGTTGCTGGTTTACATTCAATGAAGGAGGATTCAT...CAAACTGTGGCCTACAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGGCATCACTGGCTTGTaGAGTGGTACATTTTCTTAC +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFGITGL*SGTFSY
Trigger: GTAAGAAAATGTACCACTCAACAAGCCAGTGATGCC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGGTGGCATCACTGGCTaGTTGAGTGGTACATTTTCT +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACGGITG*LSGTFS
Trigger: AGAAAATGTACCACTCAACAAGCCAGTGATGCCACC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCTGCTTGCCACTGGGTaGCAAGAGGTCCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRLLATG*QEVLLQ
Trigger: CTGGAGAAGGACCTCTTGCAACCCAGTGGCAAGCAG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCCTCTGGGCTCCTGCTaGCCACTGGGTTGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDPLGSC*PLGCKR
Trigger: CCTCTTGCAACCCAGTGGCAAGCAGGAGCCCAGAGG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAAGTCCGACGGACAATaGAGAGAGGTTAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACKSDGQ*REVKSL
Trigger: CAAACTCTTAACCTCTCTCAATTGTCCGTCGGACTT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGGGCTTAACAGTGACATaGACAAATCCTTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQGLTVT*TNPSPK
Trigger: CTTTGGAGAAGGATTTGTCAATGTCACTGTTAAGCC...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTGGCTTAACAGTGACATaGACAAATCCTTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFGLTVT*TNPSPK
Trigger: CTTTGGAGAAGGATTTGTCAATGTCACTGTTAAGCC...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCAAAGTGATGGAGTTTaGGGGCAAAGTTATGGTGTG +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACQSDGV*GQSYGV
Trigger: CACACCATAACTTTGCCCCAAAACTCCATCACTTTG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATGCTTGATACCATATTaGGGCCTCAGTTCCATTCTT +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRCLIPY*GLSSIL
Trigger: AAGAATGGAACTGAGGCCCAAATATGGTATCAAGCA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTTGCTTGATACCATATTaGGGCCTCAGTTCCATTCTT +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFCLIPY*GLSSIL
Trigger: AAGAATGGAACTGAGGCCCAAATATGGTATCAAGCA...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTCATTCATGGAAACCTTaGGATTCCCTCTCTCCATCT +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACHSWKP*DSLSPS
Trigger: AGATGGAGAGAGGGAATCCAAAGGTTTCCATGAATG...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGAGCAAAGTTTTTGTTTaGTGCCTTCAAAAACCGGTC +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPSKVFV*CLQKPV
Trigger: GACCGGTTTTTGAAGGCACAAAACAAAAACTTTGCT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGGCACTGTGCGAGTGTaGCCGTCAGCACAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSGTVRV*PSAQKA
Trigger: AGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACTATGTCAAGTTATTTaGGAAAGTACCTGTCGGGGA +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTLCQVI*ESTCRG
Trigger: TCCCCGACAGGTACTTTCCAAAATAACTTGACATAG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGACTATGTCAAGTTATTTaGGAAAGTACCTGTCGGGGA +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRLCQVI*ESTCRG
Trigger: TCCCCGACAGGTACTTTCCAAAATAACTTGACATAG...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGATTGTGCAACAGGATATaGTTTAGGTGTGCTCACACT +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRLCNRI*FRCAHT
Trigger: AGTGTGAGCACACCTAAACAATATCCTGTTGCACAA...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAATGGTGTTTAAATACCTaGCTTCTTCATCAGCAATGC +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQWCLNT*LLHQQC
Trigger: GCATTGCTGATGAAGAAGCAAGGTATTTAAACACCA...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGGTGTTTAAATACCTaGCTTCTTCATCAGCAATGC +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPWCLNT*LLHQQC
Trigger: GCATTGCTGATGAAGAAGCAAGGTATTTAAACACCA...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGGCATCACTGGCTTGTaGAGTGGTACATTTTCTTAC +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACGITGL*SGTFSY
Trigger: GTAAGAAAATGTACCACTCAACAAGCCAGTGATGCC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGGGCACAACCTGCAATaGTCACCAGCAGCAGCAATG +
Preference number: 5 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSGHNLQ*SPAAAM
Trigger: CATTGCTGCTGCTGGTGACAATTGCAGGTTGTGCCC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378214.8
ENST00000537886.5
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGGCTCACAGTTCTCTTaGTGGGGGCAGCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLGSQFS*WGQLTR
Trigger: CCTGGTGAGCTGCCCCCACAAAGAGAACTGTGAGCC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGAGTTTGCTTGTGTCCTaGTTTTATTTCACCTTGGTA +
Preference number: 5 (lower is better)
Translates to: VSTESLLHARLRTSTDGPSLLVS*FYFTLV
Trigger: TACCAAGGTGAAATAAAACAAGGACACAAGCAAACT...CGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGGCTTGGCACTGTGCGAGTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAAGAGAGGTTAAGAGTTaGCTTGTGTCCTTGTTTTAT +
Preference number: 5 (lower is better)
Translates to: GLGTVRVLPSAQKACYMQREVKS*LVSLFY
Trigger: ATAAAACAAGGACACAAGCAAACTCTTAACCTCTCT...TTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACACTCGCACAGTGCCAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTGGCTTAACAGTGACATaGACAAATCCTTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACGLTVT*TNPSPK
Trigger: CTTTGGAGAAGGATTTGTCAATGTCACTGTTAAGCC...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAAATCTCCTTCCTGCATaGCAGATAAATGAAGGTATG +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRNLLPA*QINEGM
Trigger: CATACCTTCATTTATCTGCAATGCAGGAAGGAGATT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTAATCTCCTTCCTGCATaGCAGATAAATGAAGGTATG +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFNLLPA*QINEGM
Trigger: CATACCTTCATTTATCTGCAATGCAGGAAGGAGATT...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTCAGTCACAGTGGCTATaGCTTTGTCAATATTTTCCA +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFQSQWL*LCQYFP
Trigger: TGGAAAATATTGACAAAGCAATAGCCACTGTGACTG...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACACAGTCACAGTGGCTATaGCTTTGTCAATATTTTCCA +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTQSQWL*LCQYFP
Trigger: TGGAAAATATTGACAAAGCAATAGCCACTGTGACTG...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGCAGCTTTGAGAACCTaGAAAGGCGGCCTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSAALRT*KGGLLC
Trigger: ACAGAGCAGGCCGCCTTTCAAGGTTCTCAAAGCTGC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGCCACTTCAGCAGCTTaGAGAACCTTGAAAGGCGGC +
Preference number: 5 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRATSAA*RTLKGG
Trigger: GCCGCCTTTCAAGGTTCTCAAAGCTGCTGAAGTGGC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGCCACTTCAGCAGCTTaGAGAACCTTGAAAGGCGGC +
Preference number: 5 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSATSAA*RTLKGG
Trigger: GCCGCCTTTCAAGGTTCTCAAAGCTGCTGAAGTGGC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTAAAAACCAGGAGGGCTaGGCACTGTGCGAGTGTTGC +
Preference number: 5 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSKNQEG*ALCECC
Trigger: GCAACACTCGCACAGTGCCAAGCCCTCCTGGTTTTT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTGGAATATATACACAATaGCTGAGTCGTTATCCCTAT +
Preference number: 5 (lower is better)
Translates to: QKACYMQDSVPPQMARASGIYTQ*LSRYPY
Trigger: ATAGGGATAACGACTCAGCAATTGTGTATATATTCC...AGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp CTCTCCTCCCCGCGCACAAAAGGTGGCATCACTGGCTTGTTGAGTGGTACATTTTGGTGTTTAAATACCTaGCTTCTTCATCAGCAATGC +
Preference number: 5 (lower is better)
Translates to: LSSPRTKGGITGLLSGTFWCLNT*LLHQQC
Trigger: GCATTGCTGATGAAGAAGCAAGGTATTTAAACACCA...AAATGTACCACTCAACAAGCCAGTGATGCCACCTTTTGTGCGCGGGGAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCTGGAGCCACTACTTCTaGGCCATGACCTCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRWSHYF*AMTSGK
Trigger: CTTCCCAGAGGTCATGGCCAAGAAGTAGTGGCTCCA...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS TCA 90 bp CATTCATGGAAACCTTTGGATTCCCTCTCTCCATCTTTTCTCGGCTaGAGATTGTGTCCTGGTCACTGTCAAACTCAGACTCGGATACCA +
Preference number: 5 (lower is better)
Translates to: HSWKPLDSLSPSFLG*RLCPGHCQTQTRIP
Trigger: TGGTATCCGAGTCTGAGTTTGACAGTGACCAGGACACAATCTTCAGCCGAGAAAAGATGGAGAGAGGGAATCCAAAGGTTTCCATGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCTGCTTGCCACTGGGTaGCAAGAGGTCCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLLLATG*QEVLLQ
Trigger: CTGGAGAAGGACCTCTTGCAACCCAGTGGCAAGCAG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGAGTTTGCTTGTGTCCTaGTTTTATTTCACCTTGGTA +
Preference number: 5 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQSLLVS*FYFTLV
Trigger: TACCAAGGTGAAATAAAACAAGGACACAAGCAAACT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GTGTTGCCGTCAGCACAGAAAGCTTGCTACATGCAAGACTCCGTACCTCCACAGAGAGAGGTTAAGAGTTaGCTTGTGTCCTTGTTTTAT +
Preference number: 5 (lower is better)
Translates to: VLPSAQKACYMQDSVPPQREVKS*LVSLFY
Trigger: ATAAAACAAGGACACAAGCAAACTCTTAACCTCTCT...CTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGACGGCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAAGAGAGGTTAAGAGTTaGCTTGTGTCCTTGTTTTAT +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRREVKS*LVSLFY
Trigger: ATAAAACAAGGACACAAGCAAACTCTTAACCTCTCT...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAATCTCCTTCCTGCATaGCAGATAAATGAAGGTATG +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACNLLPA*QINEGM
Trigger: CATACCTTCATTTATCTGCAATGCAGGAAGGAGATT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATACCATCAGGCTGGAGTaGTGCTCTGTGCTTCGGTGC +
Preference number: 5 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDTIRLE*CSVLRC
Trigger: GCACCGAAGCACAGAGCACAACTCCAGCCTGATGGT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AAGCTTGCTACATGCAAGACTCCGTACCTCCACAGATGGCCCGTGCCTCTTAGAGGAATATATACACAATaGCTGAGTCGTTATCCCTAT +
Preference number: 5 (lower is better)
Translates to: KLATCKTPYLHRWPVPLRGIYTQ*LSRYPY
Trigger: ATAGGGATAACGACTCAGCAATTGTGTATATATTCC...TCTAAGAGGCACGGGCCATCTGTGGAGGTACGGAGTCTTGCATGTAGCAAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AGATCCTTCTGTGATGGAAGGATCAGAGAGGCCAGGCTGAGATGGCCAAGGACAATGAATCCTCCTTCATaGAATGTAAACCAGCAACTA +
Preference number: 5 (lower is better)
Translates to: RSFCDGRIREARLRWPRTMNPPS*NVNQQL
Trigger: TAGTTGCTGGTTTACATTCAATGAAGGAGGATTCAT...TGTCCTTGGCCATCTCAGCCTGGCCTCTCTGATCCTTCCATCACAGAAGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS TCA 90 bp ATTAGAACCTCTTTTCCAGAGCTGTTGCTGGATTGTTCCTGGAGCTaGGAAGCCTTTTCTTTCTCCAACACCTCTCCTGAAGATGGAGTA +
Preference number: 5 (lower is better)
Translates to: IRTSFPELLLDCSWS*EAFSFSNTSPEDGV
Trigger: TACTCCATCTTCAGGAGAGGTGTTGGAGAAAGAAAAGGCTTCTCAGCTCCAGGAACAATCCAGCAACAGCTCTGGAAAAGAGGTTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS TCA 90 bp TTCAGGCTGGACAATCACAGTCACCACAGCAGTAGACTGTTGCCTTaGAGAATCTGTCACCTTCAGCTGAAATGTATAATCTCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: FRLDNHSHHSSRLLP*RICHLQLKCIISFL
Trigger: CAGGAAGGAGATTATACATTTCAGCTGAAGGTGACAGATTCTTCAAGGCAACAGTCTACTGCTGTGGTGACTGTGATTGTCCAGCCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCTCTTTTCCAGAGCTGTaGCTGGATTGTTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRSFPEL*LDCSWS
Trigger: GCTCCAGGAACAATCCAGCAACAGCTCTGGAAAAGA...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAGTTTGCTTGTGTCCTaGTTTTATTTCACCTTGGTA +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACSLLVS*FYFTLV
Trigger: TACCAAGGTGAAATAAAACAAGGACACAAGCAAACT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTAGAGAGGTTAAGAGTTaGCTTGTGTCCTTGTTTTAT +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACREVKS*LVSLFY
Trigger: ATAAAACAAGGACACAAGCAAACTCTTAACCTCTCT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGCTACAGGTGGCAGGTaGACTCTTCTGGCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDATGGR*TLLAGL
Trigger: TAAGCCTGCCAGAAGAGTCAACCTGCCACCTGTAGC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGTCAGCACAGAAAGCTaGCTACATGCAAGACTCCGT +
Preference number: 5 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRVSTES*LHARLR
Trigger: ACGGAGTCTTGCATGTAGCAAGCTTTCTGTGCTGAC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTAAAAACCAGGAGGGCTaGGCACTGTGCGAGTGTTGC +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLKNQEG*ALCECC
Trigger: GCAACACTCGCACAGTGCCAAGCCCTCCTGGTTTTT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCAGCAACTAAAGTGCTaGTTAGCCTGTGAGCCCTAC +
Preference number: 5 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRQQLKC*LACEPY
Trigger: GTAGGGCTCACAGGCTAACAAGCACTTTAGTTGCTG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCAGCAACTAAAGTGCTaGTTAGCCTGTGAGCCCTAC +
Preference number: 5 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSQQLKC*LACEPY
Trigger: GTAGGGCTCACAGGCTAACAAGCACTTTAGTTGCTG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TGCTTGTTAGCCTGTGAGCCCTACAAACACCCACTCCCATATTCTAGGGCCTGTATGAATCCTCCTTCATaGAATGTAAACCAGCAACTA +
Preference number: 5 (lower is better)
Translates to: CLLACEPYKHPLPYSRACMNPPS*NVNQQL
Trigger: TAGTTGCTGGTTTACATTCAATGAAGGAGGATTCAT...ACAGGCCCTAGAATATGGGAGTGGGTGTTTGTAGGGCTCACAGGCTAACAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTTCTGTGCTTCGGTGCTaGATACCACAGTTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSSVLRC*IPQLLS
Trigger: AGAGAGCAACTGTGGTATCAAGCACCGAAGCACAGA...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537886.5
CDS-3UTR CAA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATATGGGGCCCATCTTCTaGGGCTCACAGTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDMGPIF*GSQFSL
Trigger: CAAAGAGAACTGTGAGCCCAAGAAGATGGGCCCCAT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATAGTCAGCCTTCTCCTTaGAGAGCCGCATGTGCAGAT +
Preference number: 5 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDSQPSP*RAACAD
Trigger: ATCTGCACATGCGGCTCTCAAAGGAGAAGGCTGACT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTATACTCCACTCACAGTaGCTCTCTCCATCCCAGATA +
Preference number: 5 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSILHSQ*LSPSQI
Trigger: TATCTGGGATGGAGAGAGCAACTGTGAGTGGAGTAT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGGTGGCATCACTGGCTaGTTGAGTGGTACATTTTCT +
Preference number: 5 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSGGITG*LSGTFS
Trigger: AGAAAATGTACCACTCAACAAGCCAGTGATGCCACC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGCTGTAGGCCACAGTTaGCTGACCTATACTCAAGGG +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLAVGHS*LTYTQG
Trigger: CCCTTGAGTATAGGTCAGCAAACTGTGGCCTACAGC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGGCCCTGAAGAGAGTTaGGTGCAAGCTTCCTTTGAT +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLGPEES*VQASFD
Trigger: ATCAAAGGAAGCTTGCACCAAACTCTCTTCAGGGCC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTCTAGGCCCCAATCTTaGCCTAGAAAGGTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLSRPQS*PRKVKS
Trigger: GGACTTGACCTTTCTAGGCAAAGATTGGGGCCTAGA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTAAGTCCGACGGACAATaGAGAGAGGTTAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSKSDGQ*REVKSL
Trigger: CAAACTCTTAACCTCTCTCAATTGTCCGTCGGACTT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATAGGCAAAGTGAGCTCTaGCAGTTGGGGAGAAACAAC +
Preference number: 5 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDRQSEL*QLGRNN
Trigger: GTTGTTTCTCCCCAACTGCAAGAGCTCACTTTGCCT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATTCTGTGCTTCGGTGCTaGATACCATATTTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDSVLRC*IPYLGL
Trigger: GAGGCCCAAATATGGTATCAAGCACCGAAGCACAGA...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTCATTCATGGAAACCTTaGGATTCCCTCTCTCCATCT +
Preference number: 5 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSHSWKP*DSLSPS
Trigger: AGATGGAGAGAGGGAATCCAAAGGTTTCCATGAATG...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCCATTCATGGAAACCTTaGGATTCCCTCTCTCCATCT +
Preference number: 5 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRHSWKP*DSLSPS
Trigger: AGATGGAGAGAGGGAATCCAAAGGTTTCCATGAATG...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCATTTGCATTCAGTTCTaGGAGCCACTACTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRICIQF*EPLLLG
Trigger: GCCAAGAAGTAGTGGCTCCAAGAACTGAATGCAAAT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTAAGTTCCACCAGAATTaGCCCTCCATCCATCAAGGC +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLKFHQN*PSIHQG
Trigger: GCCTTGATGGATGGAGGGCAAATTCTGGTGGAACTT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTGGCTTAACAGTGACATaGACAAATCCTTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSGLTVT*TNPSPK
Trigger: CTTTGGAGAAGGATTTGTCAATGTCACTGTTAAGCC...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTTGCTTGATACCATATTaGGGCCTCAGTTCCATTCTT +
Preference number: 5 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSCLIPY*GLSSIL
Trigger: AAGAATGGAACTGAGGCCCAAATATGGTATCAAGCA...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCTTGTGCAACAGGATATaGTTTAGGTGTGCTCACACT +
Preference number: 5 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRLCNRI*FRCAHT
Trigger: AGTGTGAGCACACCTAAACAATATCCTGTTGCACAA...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTATTCATAGTTGTAGGTaGTTTCTACAGGTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLIHSCR*FLQVAL
Trigger: CAGCGCCACCTGTAGAAACAACCTACAACTATGAAT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTTTGTTTTATTTCACCTaGGTAGTCTGTGGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLLFYFT*VVCGVA
Trigger: AGCCACCCCACAGACTACCAAGGTGAAATAAAACAA...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTAAGTCCGACGGACAATaGAGAGAGGTTAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLKSDGQ*REVKSL
Trigger: CAAACTCTTAACCTCTCTCAATTGTCCGTCGGACTT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TTGTTTAGGTGTGCTCACACTTGGTACCACAACACTGGTTCTATCTCTCATTCTAATCTCCTTCCTGCATaGCAGATAAATGAAGGTATG +
Preference number: 5 (lower is better)
Translates to: LFRCAHTWYHNTGSISHSNLLPA*QINEGM
Trigger: CATACCTTCATTTATCTGCAATGCAGGAAGGAGATT...AGAATGAGAGATAGAACCAGTGTTGTGGTACCAAGTGTGAGCACACCTAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCATTCATGGAAACCTTaGGATTCCCTCTCTCCATCT +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLHSWKP*DSLSPS
Trigger: AGATGGAGAGAGGGAATCCAAAGGTTTCCATGAATG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCTGGTGTTTAAATACCTaGCTTCTTCATCAGCAATGC +
Preference number: 5 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRWCLNT*LLHQQC
Trigger: GCATTGCTGATGAAGAAGCAAGGTATTTAAACACCA...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCGCCAGAAATTCACATTaGCATGCAAACAACCATAAC +
Preference number: 5 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRARNSH*HANNHN
Trigger: GTTATGGTTGTTTGCATGCAAATGTGAATTTCTGGC...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTATTTGCATTCAGTTCTaGGAGCCACTACTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLICIQF*EPLLLG
Trigger: GCCAAGAAGTAGTGGCTCCAAGAACTGAATGCAAAT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCAAGGCAGGAGTTCTTaGTTTAGTGGAAAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLQGRSS*FSGKQN
Trigger: GTTCTGCTTTCCACTAAACAAAGAACTCCTGCCTTG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp GGAATATATACACAATTGCTGAGTCGTTATCCCTATCTATGGCAGTCCAAACGCAGTTTGCTTGTGTCCTaGTTTTATTTCACCTTGGTA +
Preference number: 5 (lower is better)
Translates to: GIYTQLLSRYPYLWQSKRSLLVS*FYFTLV
Trigger: TACCAAGGTGAAATAAAACAAGGACACAAGCAAACT...GCGTTTGGACTGCCATAGATAGGGATAACGACTCAGCAATTGTGTATATATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCTATGTCAAGTTATTTaGGAAAGTACCTGTCGGGGA +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLLCQVI*ESTCRG
Trigger: TCCCCGACAGGTACTTTCCAAAATAACTTGACATAG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATCAGTCACAGTGGCTATaGCTTTGTCAATATTTTCCA +
Preference number: 5 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDQSQWL*LCQYFP
Trigger: TGGAAAATATTGACAAAGCAATAGCCACTGTGACTG...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTCAGTCACAGTGGCTATaGCTTTGTCAATATTTTCCA +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLQSQWL*LCQYFP
Trigger: TGGAAAATATTGACAAAGCAATAGCCACTGTGACTG...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTAGCAAAGTTTTTGTTTaGTGCCTTCAAAAACCGGTC +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLSKVFV*CLQKPV
Trigger: GACCGGTTTTTGAAGGCACAAAACAAAAACTTTGCT...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATTGGTGTTTAAATACCTaGCTTCTTCATCAGCAATGC +
Preference number: 5 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDWCLNT*LLHQQC
Trigger: GCATTGCTGATGAAGAAGCAAGGTATTTAAACACCA...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp TACCTTGCTGCATGTTTTTCAGATAGTTCCTTAGTCATACACATGCTTAGCCTTGCCAGAAATTCACATTaGCATGCAAACAACCATAAC +
Preference number: 5 (lower is better)
Translates to: YLAACFSDSSLVIHMLSLARNSH*HANNHN
Trigger: GTTATGGTTGTTTGCATGCAAATGTGAATTTCTGGC...AAGGCTAAGCATGTGTATGACTAAGGAACTATCTGAAAAACATGCAGCAAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATGGAATATATACACAATaGCTGAGTCGTTATCCCTAT +
Preference number: 5 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDGIYTQ*LSRYPY
Trigger: ATAGGGATAACGACTCAGCAATTGTGTATATATTCC...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS-3UTR CAA 90 bp AGGACTCACTTTCTGATCACTACTGTGATGTTTGATTTCCCAGAGATTCAAGATATGAATCCTCCTTCATaGAATGTAAACCAGCAACTA +
Preference number: 5 (lower is better)
Translates to: RTHFLITTVMFDFPEIQDMNPPS*NVNQQL
Trigger: TAGTTGCTGGTTTACATTCAATGAAGGAGGATTCAT...ATCTTGAATCTCTGGGAAATCAAACATCACAGTAGTGATCAGAAAGTGAGTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS TCA 72 bp CCGCTGGCACCGCAGGACTGTCTCCAACAGAGGAGTTaGAGGCCCCCTCGCTGCCCGGCAGTAGGCCCCAGT +
Preference number: 6 (lower is better)
Translates to: PLAPQDCLQQRS*RPPRCPAVGPS
Trigger: ACTGGGGCCTACTGCCGGGCAGCGAGGGGGCCTTCAACTCCTCTGTTGGAGACAGTCCTGCGGTGCCAGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS GCA 72 bp CTGTGGTCACTGCTGGCGACACTGAAGCTCGCCCCATaGGTTGCTGCTGGCCCTGAGCATCACTCGCCGTCC +
Preference number: 6 (lower is better)
Translates to: LWSLLATLKLAP*VAAGPEHHSPS
Trigger: GGACGGCGAGTGATGCTCAGGGCCAGCAGCAACGCATGGGGCGAGCTTCAGTGTCGCCAGCAGTGACCACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS GCA 72 bp CCCCAGTCCGTGTACTCGGCACTCCCTCTGGGCTCCTaGTTGCCACTGGGTTGCAAGAGGTCCTTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: PQSVYSALPLGS*LPLGCKRSFSS
Trigger: GCTGGAGAAGGACCTCTTGCAACCCAGTGGCAAGCAGGAGCCCAGAGGGAGTGCCGAGTACACGGACTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS TCA 72 bp GACACTGAAGCTCGCCCCATGCGTTGCTGCTGGCCCTaGGCATCACTCGCCGTCCCACTTGTTCCTCCTCGT +
Preference number: 6 (lower is better)
Translates to: DTEARPMRCCWP*ASLAVPLVPPR
Trigger: ACGAGGAGGAACAAGTGGGACGGCGAGTGATGCTCAGGGCCAGCAGCAACGCATGGGGCGAGCTTCAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS GCA 72 bp CCAGGTCACAGCTGGACAGGTCACAGCAAGCGGCCGTaGAGTCTACGACAGGGAAGGTGTGAGACACCCGCA +
Preference number: 6 (lower is better)
Translates to: PGHSWTGHSKRP*SLRQGRCETPA
Trigger: TGCGGGTGTCTCACACCTTCCCTGTCGTAGACTGCACGGCCGCTTGCTGTGACCTGTCCAGCTGTGACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS GCA 72 bp AGTCCGTGTACTCGGCACTCCCTCTGGGCTCCTGCTTaGCACTGGGTTGCAAGAGGTCCTTCTCCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: SPCTRHSLWAPA*HWVARGPSPAP
Trigger: GGGAGCTGGAGAAGGACCTCTTGCAACCCAGTGGCAAGCAGGAGCCCAGAGGGAGTGCCGAGTACACGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS GCA 72 bp TGCCTCACAAGGGTGTCCTTCCGCTGCTCTGTCAGCTaGCCAACACCAACCTGCAGGGTCAGCTCCACCAGG +
Preference number: 6 (lower is better)
Translates to: CLTRVSFRCSVS*PTPTCRVSSTR
Trigger: CCTGGTGGAGCTGACCCTGCAGGTTGGTGTTGGGCAGCTGACAGAGCAGCGGAAGGACACCCTTGTGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS CAA 72 bp CAGTCCGTGTACTCGGCACTCCCTCTGGGCTCCTGCTaGCCACTGGGTTGCAAGAGGTCCTTCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: QSVYSALPLGSC*PLGCKRSFSSS
Trigger: GGAGCTGGAGAAGGACCTCTTGCAACCCAGTGGCAAGCAGGAGCCCAGAGGGAGTGCCGAGTACACGGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS TCA 72 bp TTTGGCCTCAAGAACTGTGGTCACTGCTGGCGACACTaGAGCTCGCCCCATGCGTTGCTGCTGGCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: FGLKNCGHCWRH*SSPHALLLALS
Trigger: GCTCAGGGCCAGCAGCAACGCATGGGGCGAGCTTCAGTGTCGCCAGCAGTGACCACAGTTCTTGAGGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS TCA 72 bp TGGCAGTGTCTGTGTCCGAGGCCCCCTGACTGTCGGTaGCTCGCAAGTGGAAAGTGTACACCCCCTCCACCA +
Preference number: 6 (lower is better)
Translates to: WQCLCPRPPDCR*LASGKCTPPPP
Trigger: TGGTGGAGGGGGTGTACACTTTCCACTTGCGAGTCACCGACAGTCAGGGGGCCTCGGACACAGACACTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS TCA 72 bp AGTAGATACCGTACCTGTGGTCACTGCTGGCGACACTaGAGCTCGCCCCATGCGTTGCTGCTGGCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: SRYRTCGHCWRH*SSPHALLLALS
Trigger: GCTCAGGGCCAGCAGCAACGCATGGGGCGAGCTTCAGTGTCGCCAGCAGTGACCACAGGTACGGTATCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS GCA 72 bp ATGTCCGAGTCCAGCACGTTCAGCAGCACAGCCAGCTaGCTCACAAGGGTGTCCTTCCGCTGCTCTGTCAGC +
Preference number: 6 (lower is better)
Translates to: MSESSTFSSTAS*LTRVSFRCSVS
Trigger: GCTGACAGAGCAGCGGAAGGACACCCTTGTGAGGCAGCTGGCTGTGCTGCTGAACGTGCTGGACTCGGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS CCA 72 bp CAGGTAATGGAGCTCAGGGTCCTGCTGCGTCTCCGCTaGCACCGCAGGACTGTCTCCAACAGAGGAGTTGAA +
Preference number: 6 (lower is better)
Translates to: QVMELRVLLRLR*HRRTVSNRGVE
Trigger: TTCAACTCCTCTGTTGGAGACAGTCCTGCGGTGCCAGCGGAGACGCAGCAGGACCCTGAGCTCCATTACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS TCA 72 bp GGTGACTGTGAGCACTGGGCTTTTCTCCACGGTGACTaGGCTGAGCTCCAGGCTTGCCGGAGGAAGACTATG +
Preference number: 6 (lower is better)
Translates to: GDCEHWAFLHGD*AELQACRRKTM
Trigger: CATAGTCTTCCTCCGGCAAGCCTGGAGCTCAGCTCAGTCACCGTGGAGAAAAGCCCAGTGCTCACAGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS TCA 72 bp ACTTCCACAGTGGCAGTGTCTGTGTCCGAGGCCCCCTaGCTGTCGGTGACTCGCAAGTGGAAAGTGTACACC +
Preference number: 6 (lower is better)
Translates to: TSTVAVSVSEAP*LSVTRKWKVYT
Trigger: GGTGTACACTTTCCACTTGCGAGTCACCGACAGTCAGGGGGCCTCGGACACAGACACTGCCACTGTGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS GCA 72 bp ATGACTGCATTGGAATATGTCCTCCCCTCGCTGCACTaGTTACGGGCACAACATGGGCTCGGCCAGCCCAGT +
Preference number: 6 (lower is better)
Translates to: MTALEYVLPSLH*LRAQHGLGQPS
Trigger: ACTGGGCTGGCCGAGCCCATGTTGTGCCCGTAAGCAGTGCAGCGAGGGGAGGACATATTCCAATGCAGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535378.5
CDS CCA 72 bp TTGTCACCAGCAGCAGCAATGAAGAGAGCACACCTGTaGGGGGCGCCATTGTGCACCACACAGTGGGTGATG +
Preference number: 6 (lower is better)
Translates to: LSPAAAMKRAHL*GAPLCTTQWVM
Trigger: CATCACCCACTGTGTGGTGCACAATGGCGCCCCCCACAGGTGTGCTCTCTTCATTGCTGCTGCTGGTGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378214.8
ENST00000535378.5
ENST00000537886.5
CDS CCA 72 bp TGGCTGCCCTCTTTCCTATTTCTCGGCCAGGCGCTCTaGGAAGTAGATACCGTACCTGTGGTCACTGCTGGC +
Preference number: 6 (lower is better)
Translates to: WLPSFLFLGQAL*EVDTVPVVTAG
Trigger: GCCAGCAGTGACCACAGGTACGGTATCTACTTCCCAGAGCGCCTGGCCGAGAAATAGGAAAGAGGGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS CCA 72 bp CCCTCCACCAGATTCGTAAGCTGCAGAGCCACACTGTaGTCAGAGCCATCGATGACATCTCCAGCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: PSTRFVSCRATL*SEPSMTSPAAG
Trigger: TCCAGCAGCTGGAGATGTCATCGATGGCTCTGACCACAGTGTGGCTCTGCAGCTTACGAATCTGGTGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS CCA 72 bp ATCACGGTGCTGAGATCCGAGTGGGCCCGAATCTTCTaGACCTTAATGTCCGAGTCCAGCACGTTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: ITVLRSEWARIF*TLMSESSTFSS
Trigger: GCTGCTGAACGTGCTGGACTCGGACATTAAGGTCCAGAAGATTCGGGCCCACTCGGATCTCAGCACCGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS TCA 72 bp CAGCAAGCGGCCGTGCAGTCTACGACAGGGAAGGTGTaGGACACCCGCATGATTCTGGTGGTTTCCAAGTTA +
Preference number: 6 (lower is better)
Translates to: QQAAVQSTTGKV*DTRMILVVSKL
Trigger: TAACTTGGAAACCACCAGAATCATGCGGGTGTCTCACACCTTCCCTGTCGTAGACTGCACGGCCGCTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS GCA 72 bp ATGACTGCATTGGAATATGTCCTCCCCTCGCTGCACTaGTTACGGGCACAACCTGCAATTGTCACCAGCAGC +
Preference number: 6 (lower is better)
Translates to: MTALEYVLPSLH*LRAQPAIVTSS
Trigger: GCTGCTGGTGACAATTGCAGGTTGTGCCCGTAAGCAGTGCAGCGAGGGGAGGACATATTCCAATGCAGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378214.8
ENST00000537886.5
CDS GCA 72 bp TGGAAAGTGTACACCCCCTCCACCAGATTCGTAAGCTaGAGAGCCACACTGTGGTCAGAGCCATCGATGACA +
Preference number: 6 (lower is better)
Translates to: WKVYTPSTRFVS*RATLWSEPSMT
Trigger: TGTCATCGATGGCTCTGACCACAGTGTGGCTCTGCAGCTTACGAATCTGGTGGAGGGGGTGTACACTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS GCA 72 bp ATTCTACTTTTGTTGGGTATTGGCCTGCCTACTGGCTaGCCTCTTTCCTATTTCTCGGCCAGGCGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: ILLLLGIGLPTG*PLSYFSARRSG
Trigger: CCCAGAGCGCCTGGCCGAGAAATAGGAAAGAGGGCAGCCAGTAGGCAGGCCAATACCCAACAAAAGTAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS GCA 72 bp ATGACTGCATTGGAATATGTCCTCCCCTCGCTGCACTaGTTACGGGCACAACCTTCTGAACTCAGGGCGTCT +
Preference number: 6 (lower is better)
Translates to: MTALEYVLPSLH*LRAQPSELRAS
Trigger: AGACGCCCTGAGTTCAGAAGGTTGTGCCCGTAAGCAGTGCAGCGAGGGGAGGACATATTCCAATGCAGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS CCA 72 bp CTCGATTCTACTTTTGTTGGGTATTGGCCTGCCTACTaGCTGCCCTCTTTCCTATTTCTCGGCCAGGCGCTC +
Preference number: 6 (lower is better)
Translates to: LDSTFVGYWPAY*LPSFLFLGQAL
Trigger: GAGCGCCTGGCCGAGAAATAGGAAAGAGGGCAGCCAGTAGGCAGGCCAATACCCAACAAAAGTAGAATCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS CAA 90 bp CAACCTTCTGAACTCAGGGCGTCTCGATTCTACTTTTGTTGGGTATaGGCCTGCCTACTGGCTGCCCTCTTTCCTATTTCTCGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: QPSELRASRFYFCWV*ACLLAALFPISRPG
Trigger: GCCTGGCCGAGAAATAGGAAAGAGGGCAGCCAGTAGGCAGGCCAATACCCAACAAAAGTAGAATCGAGACGCCCTGAGTTCAGAAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS GCA 72 bp AGGCAAAGTGAGCTCTTGCAGTTGGGGAGAAACAACTaGTACAGGTGGCAGGTTGACTCTTCTGGCAGGCTT +
Preference number: 6 (lower is better)
Translates to: RQSELLQLGRNN*YRWQVDSSGRL
Trigger: AAGCCTGCCAGAAGAGTCAACCTGCCACCTGTAGCAGTTGTTTCTCCCCAACTGCAAGAGCTCACTTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS GCA 72 bp AGCAAGAAGTCAGCCTTCTCCTTTGAGAGCCGCATGTaGAGATTTCGGGCCACTTCAGCAGCTTTGAGAACC +
Preference number: 6 (lower is better)
Translates to: SKKSAFSFESRM*RFRATSAALRT
Trigger: GGTTCTCAAAGCTGCTGAAGTGGCCCGAAATCTGCACATGCGGCTCTCAAAGGAGAAGGCTGACTTCTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS GCA 72 bp AGGGCGTCTCGATTCTACTTTTGTTGGGTATTGGCCTaGCTACTGGCTGCCCTCTTTCCTATTTCTCGGCCA +
Preference number: 6 (lower is better)
Translates to: RASRFYFCWVLA*LLAALFPISRP
Trigger: TGGCCGAGAAATAGGAAAGAGGGCAGCCAGTAGGCAGGCCAATACCCAACAAAAGTAGAATCGAGACGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS CCA 72 bp CCTTCTGAACTCAGGGCGTCTCGATTCTACTTTTGTTaGGTATTGGCCTGCCTACTGGCTGCCCTCTTTCCT +
Preference number: 6 (lower is better)
Translates to: PSELRASRFYFC*VLACLLAALFP
Trigger: AGGAAAGAGGGCAGCCAGTAGGCAGGCCAATACCCAACAAAAGTAGAATCGAGACGCCCTGAGTTCAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS CAA 90 bp TCCTGGTCACTGTCAAACTCAGACTCGGATACCATCAGGCTGGAGTaGTGCTCTGTGCTTCGGTGCTTGATACCACAGTTGCTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: SWSLSNSDSDTIRLE*CSVLRCLIPQLLSP
Trigger: TGGAGAGAGCAACTGTGGTATCAAGCACCGAAGCACAGAGCACAACTCCAGCCTGATGGTATCCGAGTCTGAGTTTGACAGTGACCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537886.5
CDS CAA 90 bp TCCTGGTCACTGTCAAACTCAGACTCGGATACCATCAGGCTGGAGTaGTGCTCTGTGCTTCGGTGCTTGATACCATATTTGGGCCTCAGT +
Preference number: 6 (lower is better)
Translates to: SWSLSNSDSDTIRLE*CSVLRCLIPYLGLS
Trigger: ACTGAGGCCCAAATATGGTATCAAGCACCGAAGCACAGAGCACAACTCCAGCCTGATGGTATCCGAGTCTGAGTTTGACAGTGACCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS TCA 72 bp CAAGACCTTGAAAAGCAAGAAGTCAGCCTTCTCCTTTaGGAGCCGCATGTGCAGATTTCGGGCCACTTCAGC +
Preference number: 6 (lower is better)
Translates to: QDLEKQEVSLLL*EPHVQISGHFS
Trigger: GCTGAAGTGGCCCGAAATCTGCACATGCGGCTCTCAAAGGAGAAGGCTGACTTCTTGCTTTTCAAGGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS GCA 72 bp TCAAACTCAGACTCGGATACCATCAGGCTGGAGTTGTaGTCTGTGCTTCGGTGCTTGATACCACAGTTGCTC +
Preference number: 6 (lower is better)
Translates to: SNSDSDTIRLEL*SVLRCLIPQLL
Trigger: GAGCAACTGTGGTATCAAGCACCGAAGCACAGAGCACAACTCCAGCCTGATGGTATCCGAGTCTGAGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537886.5
CDS CAA 72 bp CTGTCAAACTCAGACTCGGATACCATCAGGCTGGAGTaGTGCTCTGTGCTTCGGTGCTTGATACCACAGTTG +
Preference number: 6 (lower is better)
Translates to: LSNSDSDTIRLE*CSVLRCLIPQL
Trigger: CAACTGTGGTATCAAGCACCGAAGCACAGAGCACAACTCCAGCCTGATGGTATCCGAGTCTGAGTTTGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537886.5
CDS TCA 72 bp AGTATCATCTGTACTTTGGCTGCCATCAATGAGGGCTaGCGTCAAAGGCAAAGTGAGCTCTTGCAGTTGGGG +
Preference number: 6 (lower is better)
Translates to: SIICTLAAINEG*RQRQSELLQLG
Trigger: CCCCAACTGCAAGAGCTCACTTTGCCTTTGACGTCAGCCCTCATTGATGGCAGCCAAAGTACAGATGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS GCA 72 bp TCAAACTCAGACTCGGATACCATCAGGCTGGAGTTGTaGTCTGTGCTTCGGTGCTTGATACCATATTTGGGC +
Preference number: 6 (lower is better)
Translates to: SNSDSDTIRLEL*SVLRCLIPYLG
Trigger: GCCCAAATATGGTATCAAGCACCGAAGCACAGAGCACAACTCCAGCCTGATGGTATCCGAGTCTGAGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS CCA 72 bp CCTCTCTCCATCTTTTCTCGGCTGAAGATTGTGTCCTaGTCACTGTCAAACTCAGACTCGGATACCATCAGG +
Preference number: 6 (lower is better)
Translates to: PLSIFSRLKIVS*SLSNSDSDTIR
Trigger: CCTGATGGTATCCGAGTCTGAGTTTGACAGTGACCAGGACACAATCTTCAGCCGAGAAAAGATGGAGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS CCA 72 bp AACTCAGGGCGTCTCGATTCTACTTTTGTTGGGTATTaGCCTGCCTACTGGCTGCCCTCTTTCCTATTTCTC +
Preference number: 6 (lower is better)
Translates to: NSGRLDSTFVGY*PAYWLPSFLFL
Trigger: GAGAAATAGGAAAGAGGGCAGCCAGTAGGCAGGCCAATACCCAACAAAAGTAGAATCGAGACGCCCTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS CAA 72 bp GAACTCAGGGCGTCTCGATTCTACTTTTGTTGGGTATaGGCCTGCCTACTGGCTGCCCTCTTTCCTATTTCT +
Preference number: 6 (lower is better)
Translates to: ELRASRFYFCWV*ACLLAALFPIS
Trigger: AGAAATAGGAAAGAGGGCAGCCAGTAGGCAGGCCAATACCCAACAAAAGTAGAATCGAGACGCCCTGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430948.6
CDS CAA 90 bp CTTTGGTCATCAGTAGACCTTGAACCATCCAAAGTAATGGAATTATaGGGAAGCACAAGAACATGTCTGCCACCAGCCCGGGCTCTGGGA +
Preference number: 6 (lower is better)
Translates to: LWSSVDLEPSKVMEL*GSTRTCLPPARALG
Trigger: TCCCAGAGCCCGGGCTGGTGGCAGACATGTTCTTGTGCTTCCCAATAATTCCATTACTTTGGATGGTTCAAGGTCTACTGATGACCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS CAA 72 bp CTGTCAAACTCAGACTCGGATACCATCAGGCTGGAGTaGTGCTCTGTGCTTCGGTGCTTGATACCATATTTG +
Preference number: 6 (lower is better)
Translates to: LSNSDSDTIRLE*CSVLRCLIPYL
Trigger: CAAATATGGTATCAAGCACCGAAGCACAGAGCACAACTCCAGCCTGATGGTATCCGAGTCTGAGTTTGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000616673.4
CDS CAA 72 bp GGCGCTGGCGCAACAAAGGCCTTCAGTTCAACTTCATaGTCGGGTAAAGTTATAATTAGGTTATCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: GAGATKAFSSTS*SGKVIIRLSPA
Trigger: GGCTGGAGATAACCTAATTATAACTTTACCCGACAATGAAGTTGAACTGAAGGCCTTTGTTGCGCCAGCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS CAA 72 bp TCAGTAGACCTTGAACCATCCAAAGTAATGGAATTATaGGGAAGCACAAGAACATGTCTGCCACCAGCCCGG +
Preference number: 6 (lower is better)
Translates to: SVDLEPSKVMEL*GSTRTCLPPAR
Trigger: CCGGGCTGGTGGCAGACATGTTCTTGTGCTTCCCAATAATTCCATTACTTTGGATGGTTCAAGGTCTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS CAA 72 bp GGCAGGTTGACTCTTCTGGCAGGCTTAACAGTGACATaGACAAATCCTTCTCCAAAGGCGTTTTCACTAGAA +
Preference number: 6 (lower is better)
Translates to: GRLTLLAGLTVT*TNPSPKAFSLE
Trigger: TTCTAGTGAAAACGCCTTTGGAGAAGGATTTGTCAATGTCACTGTTAAGCCTGCCAGAAGAGTCAACCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS CAA 72 bp GGACAATTGAGAGAGGTTAAGAGTTTGCTTGTGTCCTaGTTTTATTTCACCTTGGTAGTCTGTGGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: GQLREVKSLLVS*FYFTLVVCGVA
Trigger: AGCCACCCCACAGACTACCAAGGTGAAATAAAACAAGGACACAAGCAAACTCTTAACCTCTCTCAATTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS CAA 72 bp TCACCTTCAGCTGAAATGTATAATCTCCTTCCTGCATaGCAGATAAATGAAGGTATGGCGTCTGTACTCCCT +
Preference number: 6 (lower is better)
Translates to: SPSAEMYNLLPA*QINEGMASVLP
Trigger: AGGGAGTACAGACGCCATACCTTCATTTATCTGCAATGCAGGAAGGAGATTATACATTTCAGCTGAAGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
CDS TCA 72 bp CAGATAGGACACAATTCTTTGGTCATCAGTAGACCTTaGACCATCCAAAGTAATGGAATTATTGGGAAGCAC +
Preference number: 6 (lower is better)
Translates to: QIGHNSLVISRP*TIQSNGIIGKH
Trigger: GTGCTTCCCAATAATTCCATTACTTTGGATGGTTCAAGGTCTACTGATGACCAAAGAATTGTGTCCTATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4
CDS CAA 72 bp ATAAAGTCCGACGGACAATTGAGAGAGGTTAAGAGTTaGCTTGTGTCCTTGTTTTATTTCACCTTGGTAGTC +
Preference number: 6 (lower is better)
Translates to: IKSDGQLREVKS*LVSLFYFTLVV
Trigger: GACTACCAAGGTGAAATAAAACAAGGACACAAGCAAACTCTTAACCTCTCTCAATTGTCCGTCGGACTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378214.8
ENST00000430948.6
ENST00000535378.5
ENST00000537886.5
ENST00000616673.4