RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIAA0100 (Homo sapiens)

Ensembl gene IDs: ENSG00000007202

Ensembl transcript IDs: ENST00000389003.7, ENST00000528896.7, ENST00000544884.5, ENST00000577261.1, ENST00000577417.5, ENST00000577580.1, ENST00000579253.1, ENST00000579924.6, ENST00000580395.1, ENST00000580882.5, ENST00000581064.1, ENST00000581267.1, ENST00000582417.1, ENST00000582901.1, ENST00000583403.5, ENST00000583860.1

Found 1200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCTaGCACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCC +
Preference number: 1 (lower is better)
Translates to: LQRTDQVLKSDAYGL*HPQILVDNGKPLPP
Trigger: GGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
3UTR CCA 90 bp CAGGGAACAGGCTTAGATGCTAGGCTTGGGCCCTGGCACAGCAGTTaGCTCTGGAAGAGGCCCTCATGCAGTTCAGCATGGAGTGTCCAC +
Preference number: 1 (lower is better)
Translates to: QGTGLDARLGPWHSS*LWKRPSCSSAWSVH
Trigger: GTGGACACTCCATGCTGAACTGCATGAGGGCCTCTTCCAGAGCCAACTGCTGTGCCAGGGCCCAAGCCTAGCATCTAAGCCTGTTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR CCA 90 bp AAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTaGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAT +
Preference number: 1 (lower is better)
Translates to: KSSWITGSPSHPTSP*SLSQSQILYCSHSN
Trigger: ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
3UTR CCA 90 bp ACAGGCTTAGATGCTAGGCTTGGGCCCTGGCACAGCAGTTGGCTCTaGAAGAGGCCCTCATGCAGTTCAGCATGGAGTGTCCACACATCC +
Preference number: 1 (lower is better)
Translates to: TGLDARLGPWHSSWL*KRPSCSSAWSVHTS
Trigger: GGATGTGTGGACACTCCATGCTGAACTGCATGAGGGCCTCTTCCAGAGCCAACTGCTGTGCCAGGGCCCAAGCCTAGCATCTAAGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR CCA 90 bp GTCACCTCTGAACAGGGAACAGGCTTAGATGCTAGGCTTGGGCCCTaGCACAGCAGTTGGCTCTGGAAGAGGCCCTCATGCAGTTCAGCA +
Preference number: 1 (lower is better)
Translates to: VTSEQGTGLDARLGP*HSSWLWKRPSCSSA
Trigger: TGCTGAACTGCATGAGGGCCTCTTCCAGAGCCAACTGCTGTGCCAGGGCCCAAGCCTAGCATCTAAGCCTGTTCCCTGTTCAGAGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR TCA 90 bp TCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTaGAGAGTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGG +
Preference number: 1 (lower is better)
Translates to: SALLSTMPCSEQTRC*RVMPMGSDTHKSSW
Trigger: CCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
3UTR CCA 90 bp TGGCACAGCAGTTGGCTCTGGAAGAGGCCCTCATGCAGTTCAGCATaGAGTGTCCACACATCCACAGTGATAGCAGTGAGATGCCGACTG +
Preference number: 1 (lower is better)
Translates to: WHSSWLWKRPSCSSA*SVHTSTVIAVRCRL
Trigger: CAGTCGGCATCTCACTGCTATCACTGTGGATGTGTGGACACTCCATGCTGAACTGCATGAGGGCCTCTTCCAGAGCCAACTGCTGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR TCA 90 bp CCCCACTCCAGAACACCAATACCTCTTTCAAACATGACAGTGGAGTaGGGATCAGAGGATCAGCCCCCTCCCGTTTCCTGGCACAGAGGA +
Preference number: 1 (lower is better)
Translates to: PHSRTPIPLSNMTVE*GSEDQPPPVSWHRG
Trigger: TCCTCTGTGCCAGGAAACGGGAGGGGGCTGATCCTCTGATCCTCACTCCACTGTCATGTTTGAAAGAGGTATTGGTGTTCTGGAGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528896.7
3UTR TCA 90 bp CCAGCAGCAGTTCAGTGCTCATCTGTGCCATATCAGAGTTTGCTGTaGAGCTTCGAAGGGGCAGCTGATCCTCATCACGGTGGTACAGGA +
Preference number: 1 (lower is better)
Translates to: PAAVQCSSVPYQSLL*SFEGAADPHHGGTG
Trigger: TCCTGTACCACCGTGATGAGGATCAGCTGCCCCTTCGAAGCTTCACAGCAAACTCTGATATGGCACAGATGAGCACTGAACTGCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581267.1
ENST00000583403.5
3UTR TCA 90 bp CTAGCAGGTGCAGCCAGTGAGAGAATTCCTGGTGCCGGTAGTGAATaGTGCAAGTGTTCAGAACTAGGGAGGCTGAGAGGTCAATGGTGG +
Preference number: 1 (lower is better)
Translates to: LAGAASERIPGAGSE*CKCSELGRLRGQWW
Trigger: CCACCATTGACCTCTCAGCCTCCCTAGTTCTGAACACTTGCATCATTCACTACCGGCACCAGGAATTCTCTCACTGGCTGCACCTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581267.1
3UTR GCA 90 bp AGTTCAGCATGGAGTGTCCACACATCCACAGTGATAGCAGTGAGATaGCGACTGCTAATGCCCACCTTTAGACACAGGTCCAGGGCCAGT +
Preference number: 1 (lower is better)
Translates to: SSAWSVHTSTVIAVR*RLLMPTFRHRSRAS
Trigger: ACTGGCCCTGGACCTGTGTCTAAAGGTGGGCATTAGCAGTCGGCATCTCACTGCTATCACTGTGGATGTGTGGACACTCCATGCTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR TCA 90 bp ATCTGTGCCATATCAGAGTTTGCTGTGAAGCTTCGAAGGGGCAGCTaGTCCTCATCACGGTGGTACAGGAACTGCAGCAGCTTCAGAGTC +
Preference number: 1 (lower is better)
Translates to: ICAISEFAVKLRRGS*SSSRWYRNCSSFRV
Trigger: GACTCTGAAGCTGCTGCAGTTCCTGTACCACCGTGATGAGGATCAGCTGCCCCTTCGAAGCTTCACAGCAAACTCTGATATGGCACAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581267.1
ENST00000583403.5
3UTR TCA 90 bp GTATCTAGTCCTCCCATTCTCGCTCAGTACCAGTACCCCGACCCATaGACCTTCCAGCAGCAGTTCAGTGCTCATCTGTGCCATATCAGA +
Preference number: 1 (lower is better)
Translates to: VSSPPILAQYQYPDP*TFQQQFSAHLCHIR
Trigger: TCTGATATGGCACAGATGAGCACTGAACTGCTGCTGGAAGGTTCATGGGTCGGGGTACTGGTACTGAGCGAGAATGGGAGGACTAGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR GCA 90 bp ACCTTCCAGCAGCAGTTCAGTGCTCATCTGTGCCATATCAGAGTTTaGTGTGAAGCTTCGAAGGGGCAGCTGATCCTCATCACGGTGGTA +
Preference number: 1 (lower is better)
Translates to: TFQQQFSAHLCHIRV*CEASKGQLILITVV
Trigger: TACCACCGTGATGAGGATCAGCTGCCCCTTCGAAGCTTCACAGCAAACTCTGATATGGCACAGATGAGCACTGAACTGCTGCTGGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR CCA 90 bp TTCATGGACAATACCACGCTTGTGTTCTCCATCTTAACCTTGACCTaGTCTGGCAGCTGCTGGAGAAGGAATAGGCCAGGCAGAGTTGGC +
Preference number: 1 (lower is better)
Translates to: FMDNTTLVFSILTLT*SGSCWRRNRPGRVG
Trigger: GCCAACTCTGCCTGGCCTATTCCTTCTCCAGCAGCTGCCAGACCAGGTCAAGGTTAAGATGGAGAACACAAGCGTGGTATTGTCCATGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR GCA 90 bp ATCTTCCAGCAGCAGTTCAGTGCTCATCTGTGCCATATCAGAGTTTaGTGTGAAGCTTCGAAGGGGCAGCTGATCCTCATCACGGTGGTA +
Preference number: 1 (lower is better)
Translates to: IFQQQFSAHLCHIRV*CEASKGQLILITVV
Trigger: TACCACCGTGATGAGGATCAGCTGCCCCTTCGAAGCTTCACAGCAAACTCTGATATGGCACAGATGAGCACTGAACTGCTGCTGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581267.1
3UTR GCA 90 bp GGACAACAACAACCCATCTTCCAGCAGCAGTTCAGTGCTCATCTGTaGCATATCAGAGTTTGCTGTGAAGCTTCGAAGGGGCAGCTGATC +
Preference number: 1 (lower is better)
Translates to: GQQQPIFQQQFSAHL*HIRVCCEASKGQLI
Trigger: GATCAGCTGCCCCTTCGAAGCTTCACAGCAAACTCTGATATGGCACAGATGAGCACTGAACTGCTGCTGGAAGATGGGTTGTTGTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581267.1
3UTR CCA 90 bp ACGCTTGTGTTCTCCATCTTAACCTTGACCTGGTCTGGCAGCTGCTaGAGAAGGAATAGGCCAGGCAGAGTTGGCTCAACTAAGTTTTCT +
Preference number: 1 (lower is better)
Translates to: TLVFSILTLTWSGSC*RRNRPGRVGSTKFS
Trigger: AGAAAACTTAGTTGAGCCAACTCTGCCTGGCCTATTCCTTCTCCAGCAGCTGCCAGACCAGGTCAAGGTTAAGATGGAGAACACAAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR TCA 90 bp CATGAATGGAGAATAGTTGGCAGAAGATCTTCAATAAGGATGGGCTaGAGGACAGTTCCTTTTGATCCACCCCAGCGCTCTGGGAGAATG +
Preference number: 1 (lower is better)
Translates to: HEWRIVGRRSSIRMG*RTVPFDPPQRSGRM
Trigger: CATTCTCCCAGAGCGCTGGGGTGGATCAAAAGGAACTGTCCTTCAGCCCATCCTTATTGAAGATCTTCTGCCAACTATTCTCCATTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR CAA 90 bp GACCCCAAGGGAATAGGGTCCTGCCCTGGGCCCATTCCCTGGGTCTaGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCAGTGTGAG +
Preference number: 2 (lower is better)
Translates to: DPKGIGSCPGPIPWV*LSCCLSGPEPDQCE
Trigger: CTCACACTGATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCCAGGGCAGGACCCTATTCCCTTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528896.7
3UTR-3UTR CCA 90 bp CCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCAGTCACCCCACAAGTCCCTaGAGCCTGAGCCAGAGTCAG +
Preference number: 2 (lower is better)
Translates to: PFPGSCSLVASLALSLISHPTSP*SLSQSQ
Trigger: CTGACTCTGGCTCAGGCTCCAGGGACTTGTGGGGTG...ACTGATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528896.7
3UTR-3UTR GCA 90 bp GGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCATTACTGTCCACCATaGCCTGCAGCGAACAGACCA +
Preference number: 2 (lower is better)
Translates to: GPIPWVLLSCCLSGPEPDHYCPP*PAANRP
Trigger: TGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATG...ATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
3UTR-3UTR CCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCACCCCACAAGTCCCTaGAGCCTGAGCCAGAGTCAG +
Preference number: 2 (lower is better)
Translates to: ETELSITVHHALQRTDQVHPTSP*SLSQSQ
Trigger: CTGACTCTGGCTCAGGCTCCAGGGACTTGTGGGGTG...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
3UTR-3UTR TCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTCAAGTCCCTGGAGCCTaGGCCAGAGTCAGATCCTGT +
Preference number: 2 (lower is better)
Translates to: DRTQHYCPPCPAANRPGAQVPGA*ARVRSC
Trigger: ACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTG...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
3UTR-3UTR GCA 90 bp GGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATAGTCAGATCCTGTACTaGAGCCACTCGAATCGCCAA +
Preference number: 2 (lower is better)
Translates to: GPIPWVLLSCCLSGPEPDSQILY*SHSNRQ
Trigger: TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACT...ATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
3UTR-3UTR GCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGAGTCAGATCCTGTACTaGAGCCACTCGAATCGCCAA +
Preference number: 2 (lower is better)
Translates to: PQILVDNGKPLPPHKSLESQILY*SHSNRQ
Trigger: TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACT...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
3UTR-3UTR CCA 90 bp CCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCAGTACCCACAAATCCTCGTaGATAACGGGAAGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: PFPGSCSLVASLALSLISTHKSS*ITGSPS
Trigger: GGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT...ACTGATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528896.7
3UTR-3UTR CCA 90 bp GGTACAGGAACTGCAGCAGCTTCAGAGTCCAAGTCAGGTGCCTCTTTTGACTATTCCACCCCAGCGCTCTaGGAGAATGGGGCAGACAGG +
Preference number: 2 (lower is better)
Translates to: GTGTAAASESKSGASFDYSTPAL*ENGADR
Trigger: CCTGTCTGCCCCATTCTCCCAGAGCGCTGGGGTGGA...ATAGTCAAAAGAGGCACCTGACTTGGACTCTGAAGCTGCTGCAGTTCCTGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR-3UTR GCA 90 bp TATCTAGTCCTCCCATTCTCGCTCAGTACCAGTACCCCGACCCATGAACCTTCCGTGATAGCAGTGAGATaGCGACTGCTAATGCCCACC +
Preference number: 2 (lower is better)
Translates to: YLVLPFSLSTSTPTHEPSVIAVR*RLLMPT
Trigger: GGTGGGCATTAGCAGTCGGCATCTCACTGCTATCAC...GGAAGGTTCATGGGTCGGGGTACTGGTACTGAGCGAGAATGGGAGGACTAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR-3UTR TCA 90 bp GGTCACCTGCACACTAGCCTTGAGGGAGTTGAGGCAGACAATGCGTTGGCGACTGTCAGGTGCCTCTTTTaGCTATTCATGGACAATACC +
Preference number: 2 (lower is better)
Translates to: GHLHTSLEGVEADNALATVRCLF*LFMDNT
Trigger: GGTATTGTCCATGAATAGTCAAAAGAGGCACCTGAC...AGTCGCCAACGCATTGTCTGCCTCAACTCCCTCAAGGCTAGTGTGCAGGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581267.1
3UTR-3UTR TCA 90 bp AAGGGGCAGCTGATCCTCATCACGGTGGTACAGGAACTGCAGCAGCTTCAGAGTGTCAGGTGCCTCTTTTaGCTATTCATGGACAATACC +
Preference number: 2 (lower is better)
Translates to: KGQLILITVVQELQQLQSVRCLF*LFMDNT
Trigger: GGTATTGTCCATGAATAGTCAAAAGAGGCACCTGAC...ACTCTGAAGCTGCTGCAGTTCCTGTACCACCGTGATGAGGATCAGCTGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581267.1
ENST00000583403.5
3UTR-3UTR CCA 90 bp GGTACAGGAACTGCAGCAGCTTCAGAGTCCAAGTCAGGTGCCTCTTTTGACTATAGGCAGACAATGCGTTaGCGACTCTGGGACAACAAC +
Preference number: 2 (lower is better)
Translates to: GTGTAAASESKSGASFDYRQTMR*RLWDNN
Trigger: GTTGTTGTCCCAGAGTCGCCAACGCATTGTCTGCCT...ATAGTCAAAAGAGGCACCTGACTTGGACTCTGAAGCTGCTGCAGTTCCTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581267.1
3UTR-3UTR TCA 90 bp GGTACAGGAACTGCAGCAGCTTCAGAGTCCAAGTCAGGTGCCTCTTTTGACTATCAGGTGTCCTCCAGCTaGCCACTCTTTAGAACTTTG +
Preference number: 2 (lower is better)
Translates to: GTGTAAASESKSGASFDYQVSSS*PLFRTL
Trigger: CAAAGTTCTAAAGAGTGGTCAGCTGGAGGACACCTG...ATAGTCAAAAGAGGCACCTGACTTGGACTCTGAAGCTGCTGCAGTTCCTGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR-3UTR GCA 90 bp CAGGAACTGCAGCAGCTTCAGAGTCCAAGTCAGGTGCCTCTTTTGACTATTCATTCAATGGTGGTCACCTaGACACTAGCCTTGAGGGAG +
Preference number: 2 (lower is better)
Translates to: QELQQLQSPSQVPLLTIHSMVVT*TLALRE
Trigger: CTCCCTCAAGGCTAGTGTGCAGGTGACCACCATTGA...ATGAATAGTCAAAAGAGGCACCTGACTTGGACTCTGAAGCTGCTGCAGTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581267.1
3UTR-3UTR TCA 90 bp CAGGAACTGCAGCAGCTTCAGAGTCCAAGTCAGGTGCCTCTTTTGACTATTCATTATCAGAGTTTGCTGTaGAGCTTCGAAGGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: QELQQLQSPSQVPLLTIHYQSLL*SFEGAA
Trigger: AGCTGCCCCTTCGAAGCTTCACAGCAAACTCTGATA...ATGAATAGTCAAAAGAGGCACCTGACTTGGACTCTGAAGCTGCTGCAGTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581267.1
ENST00000583403.5
3UTR-3UTR TCA 90 bp ATGCCCACCTTTAGACACAGGTCCAGGGCCAGTGAAAGCTCCACTAGGCAGGTGTTAGAACTTTGCTGTTaGTCTTACATAAGCTCACCT +
Preference number: 2 (lower is better)
Translates to: MPTFRHRSRASESSTRQVLELCC*SYISSP
Trigger: AGGTGAGCTTATGTAAGATCAACAGCAAAGTTCTAA...CACCTGCCTAGTGGAGCTTTCACTGGCCCTGGACCTGTGTCTAAAGGTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR-3UTR CCA 90 bp CACCTGCACACTAGCCTTGAGGGAGTTGAGGCAGACAATGCGTTGGCGACTCTGTCTTTTGACTATTCATaGACAATACCACGCTTGTGT +
Preference number: 2 (lower is better)
Translates to: HLHTSLEGVEADNALATLSFDYS*TIPRLC
Trigger: ACACAAGCGTGGTATTGTCCATGAATAGTCAAAAGA...CAGAGTCGCCAACGCATTGTCTGCCTCAACTCCCTCAAGGCTAGTGTGCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581267.1
3UTR-3UTR TCA 90 bp TTGCTGTTGATCTTACATAAGCTCACCTCACAGATTAGCCTTTTCCCATCACTACTTCGAAGGGGCAGCTaGTCCTCATCACGGTGGTAC +
Preference number: 2 (lower is better)
Translates to: LLLILHKLTSQISLFPSLLRRGS*SSSRWY
Trigger: GTACCACCGTGATGAGGATCAGCTGCCCCTTCGAAG...TAGTGATGGGAAAAGGCTAATCTGTGAGGTGAGCTTATGTAAGATCAACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR-3UTR GCA 90 bp CAGGAACTGCAGCAGCTTCAGAGTCCAAGTCAGGTGCCTCTTTTGACTATTCATTGCCATATCAGAGTTTaGTGTGAAGCTTCGAAGGGG +
Preference number: 2 (lower is better)
Translates to: QELQQLQSPSQVPLLTIHCHIRV*CEASKG
Trigger: CCCCTTCGAAGCTTCACAGCAAACTCTGATATGGCA...ATGAATAGTCAAAAGAGGCACCTGACTTGGACTCTGAAGCTGCTGCAGTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581267.1
ENST00000583403.5
3UTR-3UTR GCA 90 bp TGCAGTTCAGCATGGAGTGTCCACACATCCACAGTGATAGCAGTGAGATGCCGATTCAGTGCTCATCTGTaGCATATCAGAGTTTGCTGT +
Preference number: 2 (lower is better)
Translates to: CSSAWSVHTSTVIAVRCRFSAHL*HIRVCC
Trigger: ACAGCAAACTCTGATATGGCACAGATGAGCACTGAA...TCGGCATCTCACTGCTATCACTGTGGATGTGTGGACACTCCATGCTGAACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR-3UTR GCA 90 bp GTATGTTCCCTCCTTCCACTCCCCAGTTACACTGAGATTAGATTAAGGAGACCACCAGCAGCAGTTCAGTaGTCATCTGTGCCATATCAG +
Preference number: 2 (lower is better)
Translates to: VCSLLPLPSYTEIRLRRPPAAVQ*SSVPYQ
Trigger: CTGATATGGCACAGATGAGCACTGAACTGCTGCTGG...TGGTCTCCTTAATCTAATCTCAGTGTAACTGGGGAGTGGAAGGAGGGAACATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR-3UTR TCA 90 bp GTATGTTCCCTCCTTCCACTCCCCAGTTACACTGAGATTAGATTAAGGAGACCAGTTTTCTGTCACCTCTaGACAGGGAACAGGCTTAGA +
Preference number: 2 (lower is better)
Translates to: VCSLLPLPSYTEIRLRRPVFCHL*TGNRLR
Trigger: TCTAAGCCTGTTCCCTGTTCAGAGGTGACAGAAAAC...TGGTCTCCTTAATCTAATCTCAGTGTAACTGGGGAGTGGAAGGAGGGAACATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR-3UTR GCA 90 bp TTGCTGTTGATCTTACATAAGCTCACCTCACAGATTAGCCTTTTCCCATCACTATGCCATATCAGAGTTTaGTGTGAAGCTTCGAAGGGG +
Preference number: 2 (lower is better)
Translates to: LLLILHKLTSQISLFPSLCHIRV*CEASKG
Trigger: CCCCTTCGAAGCTTCACAGCAAACTCTGATATGGCA...TAGTGATGGGAAAAGGCTAATCTGTGAGGTGAGCTTATGTAAGATCAACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR-3UTR TCA 90 bp TTGCTGTTGATCTTACATAAGCTCACCTCACAGATTAGCCTTTTCCCATCACTACTGCTTCTACTGATCTaGATATGCCATAAGGACTCA +
Preference number: 2 (lower is better)
Translates to: LLLILHKLTSQISLFPSLLLLLI*ICHKDS
Trigger: TGAGTCCTTATGGCATATTCAGATCAGTAGAAGCAG...TAGTGATGGGAAAAGGCTAATCTGTGAGGTGAGCTTATGTAAGATCAACAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR-3UTR CCA 90 bp CTCAGAGGTATCCACCTTGAGAACCATGATGTTTATAGCATCTACATGAATGGATCTTTTGACTATTCATaGACAATACCACGCTTGTGT +
Preference number: 2 (lower is better)
Translates to: LRGIHLENHDVYSIYMNGSFDYS*TIPRLC
Trigger: ACACAAGCGTGGTATTGTCCATGAATAGTCAAAAGA...TCCATTCATGTAGATGCTATAAACATCATGGTTCTCAAGGTGGATACCTCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR CCA 72 bp TGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTaGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGC +
Preference number: 3 (lower is better)
Translates to: WITGSPSHPTSP*SLSQSQILYCS
Trigger: GCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
3UTR CCA 72 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTaGATAACGGGAAGCCCCTCCCACCCCACAAGTCCC +
Preference number: 3 (lower is better)
Translates to: VMPMGSDTHKSS*ITGSPSHPTSP
Trigger: GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
3UTR CCA 72 bp GGCTTAGATGCTAGGCTTGGGCCCTGGCACAGCAGTTaGCTCTGGAAGAGGCCCTCATGCAGTTCAGCATGG +
Preference number: 3 (lower is better)
Translates to: GLDARLGPWHSS*LWKRPSCSSAW
Trigger: CCATGCTGAACTGCATGAGGGCCTCTTCCAGAGCCAACTGCTGTGCCAGGGCCCAAGCCTAGCATCTAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR TCA 72 bp CTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTaGAGAGTGATGCCTATGGGCTCTGACACCCACAAA +
Preference number: 3 (lower is better)
Translates to: LSTMPCSEQTRC*RVMPMGSDTHK
Trigger: TTTGTGGGTGTCAGAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
3UTR TCA 72 bp CCTCCCATTCTCGCTCAGTACCAGTACCCCGACCCATaGACCTTCCAGCAGCAGTTCAGTGCTCATCTGTGC +
Preference number: 3 (lower is better)
Translates to: PPILAQYQYPDP*TFQQQFSAHLC
Trigger: GCACAGATGAGCACTGAACTGCTGCTGGAAGGTTCATGGGTCGGGGTACTGGTACTGAGCGAGAATGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR GCA 72 bp TGGAGTGTCCACACATCCACAGTGATAGCAGTGAGATaGCGACTGCTAATGCCCACCTTTAGACACAGGTCC +
Preference number: 3 (lower is better)
Translates to: WSVHTSTVIAVR*RLLMPTFRHRS
Trigger: GGACCTGTGTCTAAAGGTGGGCATTAGCAGTCGGCATCTCACTGCTATCACTGTGGATGTGTGGACACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR CCA 72 bp TTGAGGGAGTTGAGGCAGACAATGCGTTGGCGACTCTaGGACAACAACAACCCATCTTCCAGCAGCAGTTCA +
Preference number: 3 (lower is better)
Translates to: LRELRQTMRWRL*DNNNPSSSSSS
Trigger: TGAACTGCTGCTGGAAGATGGGTTGTTGTTGTCCCAGAGTCGCCAACGCATTGTCTGCCTCAACTCCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581267.1
3UTR CCA 72 bp AATACCACGCTTGTGTTCTCCATCTTAACCTTGACCTaGTCTGGCAGCTGCTGGAGAAGGAATAGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: NTTLVFSILTLT*SGSCWRRNRPG
Trigger: GCCTGGCCTATTCCTTCTCCAGCAGCTGCCAGACCAGGTCAAGGTTAAGATGGAGAACACAAGCGTGGTATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR TCA 72 bp AGAACACCAATACCTCTTTCAAACATGACAGTGGAGTaGGGATCAGAGGATCAGCCCCCTCCCGTTTCCTGG +
Preference number: 3 (lower is better)
Translates to: RTPIPLSNMTVE*GSEDQPPPVSW
Trigger: CCAGGAAACGGGAGGGGGCTGATCCTCTGATCCTCACTCCACTGTCATGTTTGAAAGAGGTATTGGTGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528896.7
3UTR GCA 72 bp CAGCAGTTCAGTGCTCATCTGTGCCATATCAGAGTTTaGTGTGAAGCTTCGAAGGGGCAGCTGATCCTCATC +
Preference number: 3 (lower is better)
Translates to: QQFSAHLCHIRV*CEASKGQLILI
Trigger: GATGAGGATCAGCTGCCCCTTCGAAGCTTCACAGCAAACTCTGATATGGCACAGATGAGCACTGAACTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581267.1
ENST00000583403.5
3UTR GCA 72 bp CAACCCATCTTCCAGCAGCAGTTCAGTGCTCATCTGTaGCATATCAGAGTTTGCTGTGAAGCTTCGAAGGGG +
Preference number: 3 (lower is better)
Translates to: QPIFQQQFSAHL*HIRVCCEASKG
Trigger: CCCCTTCGAAGCTTCACAGCAAACTCTGATATGGCACAGATGAGCACTGAACTGCTGCTGGAAGATGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581267.1
3UTR-3UTR CAA 90 bp TTTAGAACAGGTGAACTAGACCCTTGGGTTTCCAGTGCTAGCAGGTGCAGCCAGAGTCAGGTGCCTCTTTaGACTATTCATGGACAATAC +
Preference number: 3 (lower is better)
Translates to: FRTGELDPWVSSASRCSQSQVPL*TIHGQY
Trigger: GTATTGTCCATGAATAGTCAAAAGAGGCACCTGACT...CTGGCTGCACCTGCTAGCACTGGAAACCCAAGGGTCTAGTTCACCTGTTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581267.1
3UTR TCA 72 bp AGAATAGTTGGCAGAAGATCTTCAATAAGGATGGGCTaGAGGACAGTTCCTTTTGATCCACCCCAGCGCTCT +
Preference number: 3 (lower is better)
Translates to: RIVGRRSSIRMG*RTVPFDPPQRS
Trigger: AGAGCGCTGGGGTGGATCAAAAGGAACTGTCCTTCAGCCCATCCTTATTGAAGATCTTCTGCCAACTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR CCA 72 bp AAAGGGATCAACAGACTGTCATCAAAACTTGTGAGCTaGGGCTATTTTCTCTCAGTATGTTCCCTCCTTCCA +
Preference number: 3 (lower is better)
Translates to: KGINRLSSKLVS*GYFLSVCSLLP
Trigger: TGGAAGGAGGGAACATACTGAGAGAAAATAGCCCCAGCTCACAAGTTTTGATGACAGTCTGTTGATCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR-3UTR CAA 90 bp GTATGTTCCCTCCTTCCACTCCCCAGTTACACTGAGATTAGATTAAGGAGACCATCAGAGGTATCCACCTaGAGAACCATGATGTTTATA +
Preference number: 3 (lower is better)
Translates to: VCSLLPLPSYTEIRLRRPSEVST*RTMMFI
Trigger: TATAAACATCATGGTTCTCAAGGTGGATACCTCTGA...TGGTCTCCTTAATCTAATCTCAGTGTAACTGGGGAGTGGAAGGAGGGAACATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR TCA 72 bp TGTCCTCCAGCTGACCACTCTTTAGAACTTTGCTGTTaGTCTTACATAAGCTCACCTCACAGATTAGCCTTT +
Preference number: 3 (lower is better)
Translates to: CPPADHSLELCC*SYISSPHRLAF
Trigger: AAAGGCTAATCTGTGAGGTGAGCTTATGTAAGATCAACAGCAAAGTTCTAAAGAGTGGTCAGCTGGAGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR-3UTR CAA 90 bp TGCCATAAGGACTCAGAGGTATCCACCTTGAGAACCATGATGTTTATAGCATCTAGTCAGGTGCCTCTTTaGACTATTCATGGACAATAC +
Preference number: 3 (lower is better)
Translates to: CHKDSEVSTLRTMMFIASSQVPL*TIHGQY
Trigger: GTATTGTCCATGAATAGTCAAAAGAGGCACCTGACT...AGATGCTATAAACATCATGGTTCTCAAGGTGGATACCTCTGAGTCCTTATGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
3UTR TCA 72 bp CCATCACTATCCAAAAGAAATCTGCTTCTACTGATCTaGATATGCCATAAGGACTCAGAGGTATCCACCTTG +
Preference number: 3 (lower is better)
Translates to: PSLSKRNLLLLI*ICHKDSEVSTL
Trigger: CAAGGTGGATACCTCTGAGTCCTTATGGCATATTCAGATCAGTAGAAGCAGATTTCTTTTGGATAGTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR TCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGCGACGGGAGCAAGGCTaGCCACTCTGCTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLRREQG*PLCSVP
Trigger: GGGCACCGAGCAGAGTGGTCAGCCTTGCTCCCGTCG...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCGGACCACAAGCCACCTaGGCTGGCGGTGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPGPQAT*AGGGPG
Trigger: GCCAGGTCCACCGCCAGCCCAGGTGGCTTGTGGTCC...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389003.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCCGACGGGAGCAAGGCTaGCCACTCTGCTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLRREQG*PLCSVP
Trigger: GGGCACCGAGCAGAGTGGTCAGCCTTGCTCCCGTCG...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGCGGTTCCGGAGGGTCTaGAGCGCAGGGAAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLRFRRV*SAGKGF
Trigger: GAACCCCTTCCCTGCGCTGCAGACCCTCCGGAACCG...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGCGGTTCCGGAGGGTCTaGAGCGCAGGGAAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWRFRRV*SAGKGF
Trigger: GAACCCCTTCCCTGCGCTGCAGACCCTCCGGAACCG...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCAGCTGTCGCCCAGACTaGCAGGAGCTCTGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLSCRPD*QELWGR
Trigger: GCGGCCCCAGAGCTCCTGCCAGTCTGGGCGACAGCT...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCGCCTGCAGCTTCCGCTaGCACCACTTGGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPACSFR*HHLVAN
Trigger: GTTGGCCACCAAGTGGTGTCAGCGGAAGCTGCAGGC...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCGGGTGTGGCGCCCGCTaGATGTGGGAGTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPGCGAR*MWESLP
Trigger: GGGCAGTGACTCCCACATTCAGCGGGCGCCACACCC...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAACGACGGGAGCAAGGCTaGCCACTCTGCTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLERREQG*PLCSVP
Trigger: GGGCACCGAGCAGAGTGGTCAGCCTTGCTCCCGTCG...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCCCAAGTGCAAGATCTaGCGCCGACGGGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: GPIPWVLLSCCLSGPEPDPKCKI*RRREQG
Trigger: GCCTTGCTCCCGTCGGCGTCAGATCTTGCACTTGGG...ATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR TCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGGCTGAGTCCCCCGAGTaGAGACATGGCCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEAESPE*RHGPDC
Trigger: GCAGTCAGGGCCATGTCTTCACTCGGGGGACTCAGC...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTCCTGCCCTGGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCAACAACTCCCCATGCTaGTTCCGAAGGGCGGCCACT +
Preference number: 4 (lower is better)
Translates to: VLPWAHSLGLALLLPLWPNNSPC*FRRAAT
Trigger: AGTGGCCGCCCTTCGGAAGCAGCATGGGGAGTTGTT...GGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCCAGGGCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGGCAACAACTCCCCATaGTGCTTCCGAAGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLGNNSP*CFRRAA
Trigger: GGCCGCCCTTCGGAAGCAGCATGGGGAGTTGTTGCC...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTCCGAGTCAAACCCTGTaGCACACCCTTCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPPSQTL*HTLPRA
Trigger: GGCCCTGGGAAGGGTGTGGCACAGGGTTTGACTCGG...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGCCGAGTCAAACCCTGTaGCACACCCTTCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLPSQTL*HTLPRA
Trigger: GGCCCTGGGAAGGGTGTGGCACAGGGTTTGACTCGG...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGACAAGCCACCTGGGCTaGCGGTGGACCTGGCTGACT +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLTSHLG*RWTWLT
Trigger: AGTCAGCCAGGTCCACCGCCAGCCCAGGTGGCTTGT...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389003.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCGGACCACAAGCCACCTaGGCTGGCGGTGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPGPQAT*AGGGPG
Trigger: GCCAGGTCCACCGCCAGCCCAGGTGGCTTGTGGTCC...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389003.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTGCTAGGCTTGGGCCCTaGCACAGCAGTTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPARLGP*HSSWLW
Trigger: CCAGAGCCAACTGCTGTGCCAGGGCCCAAGCCTAGC...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCAGGGCAAAGGTGGGCTaGGGTCAGCTGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPRAKVG*GQLRAW
Trigger: CCAAGCCCTCAGCTGACCCCAGCCCACCTTTGCCCT...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCAGCTGTCGCCCAGACTaGCAGGAGCTCTGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPSCRPD*QELWGR
Trigger: GCGGCCCCAGAGCTCCTGCCAGTCTGGGCGACAGCT...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTCCTGCCCTGGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCCCCCCTCCCGTTTCCTaGCACAGAGGAAGGACAGTT +
Preference number: 4 (lower is better)
Translates to: VLPWAHSLGLALLLPLWPPPPVS*HRGRTV
Trigger: AACTGTCCTTCCTCTGTGCCAGGAAACGGGAGGGGG...GGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCCAGGGCAGGAC
62% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR TCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCAGCAGGTGCAGCCAGTaGGAGAATTCCTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPSRCSQ*ENSWCR
Trigger: CCGGCACCAGGAATTCTCTCACTGGCTGCACCTGCT...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGTTAGGACGCCCCGCTaGTGGATGCTTTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLVRTPR*WMLCGL
Trigger: CAGGCCACAAAGCATCCATCAGCGGGGCGTCCTAAC...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGGGGTGTGGCGCCCGCTaGATGTGGGAGTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEGCGAR*MWESLP
Trigger: GGGCAGTGACTCCCACATTCAGCGGGCGCCACACCC...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGGGTGTGGCGCCCGCTaGATGTGGGAGTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLGCGAR*MWESLP
Trigger: GGGCAGTGACTCCCACATTCAGCGGGCGCCACACCC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCCTGCACCACACTaGACCTCCAGAGAGCGGATG +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWSPAPH*TSRERM
Trigger: CATCCGCTCTCTGGAGGTTCAGTGTGGTGCAGGGCT...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGTGGGCTGGGGTCAGCTaGGGGCTTGGTCAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGWAGVS*GLGQEV
Trigger: GACCTCTTGACCAAGCCCTCAGCTGACCCCAGCCCA...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACTGGGCTGGGGTCAGCTaGGGGCTTGGTCAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHWAGVS*GLGQEV
Trigger: GACCTCTTGACCAAGCCCTCAGCTGACCCCAGCCCA...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTCTGGGGCCCGCAGAGTaGCACTATGGTGATCATGGG +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPLGPAE*HYGDHG
Trigger: CCCATGATCACCATAGTGTCACTCTGCGGGCCCCAG...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAGCTGAGTCCCCCGAGTaGAGACATGGCCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQAESPE*RHGPDC
Trigger: GCAGTCAGGGCCATGTCTTCACTCGGGGGACTCAGC...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGGCTGAGTCCCCCGAGTaGAGACATGGCCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGAESPE*RHGPDC
Trigger: GCAGTCAGGGCCATGTCTTCACTCGGGGGACTCAGC...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTCCTGCCCTGGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCGAACAGACCAGGTGCTaGAGAGTGATGCCTATGGGC +
Preference number: 4 (lower is better)
Translates to: VLPWAHSLGLALLLPLWPEQTRC*RVMPMG
Trigger: GCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTC...GGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCCAGGGCAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGGGTATCTGACTGGGTaGTGGACAGGCCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLGYLTG*WTGPEA
Trigger: AGCCTCTGGGCCTGTCCAGCACCCAGTCAGATACCC...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTCCTGCCCTGGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCCATGTTCCTCTCCACTaGCACGTTACCCCACGGAAG +
Preference number: 4 (lower is better)
Translates to: VLPWAHSLGLALLLPLWPHVPLH*HVTPRK
Trigger: CTTCCGTGGGGTAACGTGGCAGTGGAGAGGAACATG...GGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCCAGGGCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGAACCATGCCGCCCACTaGCTGCCCACTCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLNHAAH*LPTLHQ
Trigger: CTGATGGAGAGTGGGCAGGCAGTGGGCGGCATGGTT...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAACCATGCCGCCCACTaGCTGCCCACTCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWNHAAH*LPTLHQ
Trigger: CTGATGGAGAGTGGGCAGGCAGTGGGCGGCATGGTT...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCGTATTTGGGCCACATaGTGCCGCACAGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLERIWAT*CRTASC
Trigger: GCAGGAGGCTGTGCGGCAGCATGTGGCCCAAATACG...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGCGTATTTGGGCCACATaGTGCCGCACAGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLRIWAT*CRTASC
Trigger: GCAGGAGGCTGTGCGGCAGCATGTGGCCCAAATACG...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACACTGTCCACCATGCCCTaGAGCGAACAGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTLSTMP*SEQTRC
Trigger: GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAG...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCCTGTCCACCATGCCCTaGAGCGAACAGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPLSTMP*SEQTRC
Trigger: GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAG...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACACAAGCCACCTGGGCTaGCGGTGGACCTGGCTGACT +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHTSHLG*RWTWLT
Trigger: AGTCAGCCAGGTCCACCGCCAGCCCAGGTGGCTTGT...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389003.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGTCCACCCCAGCGCTCTaGGAGAATGGGGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGSTPAL*ENGADR
Trigger: CCTGTCTGCCCCATTCTCCCAGAGCGCTGGGGTGGA...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAATCCACCCCAGCGCTCTaGGAGAATGGGGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQSTPAL*ENGADR
Trigger: CCTGTCTGCCCCATTCTCCCAGAGCGCTGGGGTGGA...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTCCCTGGCACAGCAGTTaGCTCTGGAAGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPPWHSS*LWKRPS
Trigger: TGAGGGCCTCTTCCAGAGCCAACTGCTGTGCCAGGG...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGCCCTGGCACAGCAGTTaGCTCTGGAAGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWPWHSS*LWKRPS
Trigger: TGAGGGCCTCTTCCAGAGCCAACTGCTGTGCCAGGG...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCACACGCCAGCAGAGGTaGTCCACAGTTAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPTRQQR*STVRTP
Trigger: GGGCGTCCTAACTGTGGACCACCTCTGCTGGCGTGT...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAAGGGCAAAGGTGGGCTaGGGTCAGCTGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQRAKVG*GQLRAW
Trigger: CCAAGCCCTCAGCTGACCCCAGCCCACCTTTGCCCT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACATCATGGGGGTTCCCATaGCACAGCCACTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTSWGFP*HSHCRS
Trigger: GGACCTGCAGTGGCTGTGCCATGGGAACCCCCATGA...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGTCATGGGGGTTCCCATaGCACAGCCACTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLSWGFP*HSHCRS
Trigger: GGACCTGCAGTGGCTGTGCCATGGGAACCCCCATGA...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGCTCAGGCAGGAACTCTaGGGCCCGCAGAGTGACACT +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLLRQEL*GPQSDT
Trigger: AGTGTCACTCTGCGGGCCCCAGAGTTCCTGCCTGAG...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGCAGGCTGGATGGTGCTaGCACTGCAGCAGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWQAGWC*HCSSWA
Trigger: AGCCCAACTGCTGCAGTGCCAGCACCATCCAGCCTG...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCAGCTGTCGCCCAGACTaGCAGGAGCTCTGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDASCRPD*QELWGR
Trigger: GCGGCCCCAGAGCTCCTGCCAGTCTGGGCGACAGCT...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCACCCCACAAGTCCCTaGAGCCTGAGCCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEHPTSP*SLSQSQ
Trigger: CTGACTCTGGCTCAGGCTCCAGGGACTTGTGGGGTG...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAAGGGTAGGGGACCCATaGCCAGCCCTGGCTCCTACT +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQRVGDP*PALAPT
Trigger: AGTAGGAGCCAGGGCTGGCCATGGGTCCCCTACCCT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR TCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAGCCTGCAGCTTCCGCTaGCACCACTTGGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEACSFR*HHLVAN
Trigger: GTTGGCCACCAAGTGGTGTCAGCGGAAGCTGCAGGC...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGCTTCGAAGGGGCAGCTaGTCCTCATCACGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWLRRGS*SSSRWY
Trigger: GTACCACCGTGATGAGGATCAGCTGCCCCTTCGAAG...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGGTTAGGACGCCCCGCTaGTGGATGCTTTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGVRTPR*WMLCGL
Trigger: CAGGCCACAAAGCATCCATCAGCGGGGCGTCCTAAC...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCAGCCCTGCACCACACTaGACCTCCAGAGAGCGGATG +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLSPAPH*TSRERM
Trigger: CATCCGCTCTCTGGAGGTTCAGTGTGGTGCAGGGCT...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCCCCAAGTGCAAGATCTaGCGCCGACGGGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPPKCKI*RRREQG
Trigger: GCCTTGCTCCCGTCGGCGTCAGATCTTGCACTTGGG...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAACCCAAGTGCAAGATCTaGCGCCGACGGGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEPKCKI*RRREQG
Trigger: GCCTTGCTCCCGTCGGCGTCAGATCTTGCACTTGGG...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCCTGGGGCCCGCAGAGTaGCACTATGGTGATCATGGG +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLLGPAE*HYGDHG
Trigger: CCCATGATCACCATAGTGTCACTCTGCGGGCCCCAG...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CATGACAGTGGAGTGAGGATCAGAGGATCAGCCCCCTCCCGTTTCCTGGCACAGCTGGGGCCCGCAGAGTaGCACTATGGTGATCATGGG +
Preference number: 4 (lower is better)
Translates to: HDSGVRIRGSAPSRFLAQLGPAE*HYGDHG
Trigger: CCCATGATCACCATAGTGTCACTCTGCGGGCCCCAG...CTGTGCCAGGAAACGGGAGGGGGCTGATCCTCTGATCCTCACTCCACTGTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR TCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGAACACGAGGTGGGGCTaGGGCACTAGTTGGGACACC +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGNTRWG*GTSWDT
Trigger: GGTGTCCCAACTAGTGCCTCAGCCCCACCTCGTGTT...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACGGGGCCGAACTTTGCTaGAGAGGCGGAGAGCTAGCT +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHGAELC*RGGELA
Trigger: AGCTAGCTCTCCGCCTCTTCAGCAAAGTTCGGCCCC...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTCCTGCCCTGGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCAACATGACAGTGGAGTaGGGATCAGAGGATCAGCCC +
Preference number: 4 (lower is better)
Translates to: VLPWAHSLGLALLLPLWPNMTVE*GSEDQP
Trigger: GGGCTGATCCTCTGATCCTCACTCCACTGTCATGTT...GGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCCAGGGCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGGCGCATGGGTGTGTTaGCATAGAGACGACGGGAAC +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLGAWVC*HRDDGN
Trigger: GTTCCCGTCGTCTCTATGGCAACACACCCATGCGCC...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTGGCGCATGGGTGTGTTaGCATAGAGACGACGGGAAC +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPGAWVC*HRDDGN
Trigger: GTTCCCGTCGTCTCTATGGCAACACACCCATGCGCC...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGCCATGGCACAGCCACTaGAGGTCCAGTGTCATGCAG +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLPWHSH*RSSVMQ
Trigger: CTGCATGACACTGGACCTGCAGTGGCTGTGCCATGG...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACATACCAGGCTGGATGGTaGTGGCACTGCAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTYQAGW*WHCSSW
Trigger: CCAACTGCTGCAGTGCCAGCACCATCCAGCCTGGTA...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGTACCAGGCTGGATGGTaGTGGCACTGCAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLYQAGW*WHCSSW
Trigger: CCAACTGCTGCAGTGCCAGCACCATCCAGCCTGGTA...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCTGTCGGCCATCCTaGTCTGTGGGGCTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWSCRPS*SVGLLS
Trigger: TGAAAGCAGCCCCACAGAGCAGGATGGCCGACAGCT...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGCTGTCGGCCATCCTaGTCTGTGGGGCTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTSCRPS*SVGLLS
Trigger: TGAAAGCAGCCCCACAGAGCAGGATGGCCGACAGCT...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACATTGCTGGGCTTGCTGTaGCTCAGCTGGCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTLLGLL*LSWLVP
Trigger: TGGAACCAGCCAGCTGAGGCACAGCAAGCCCAGCAA...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGGCTGACACCACTTGGTaGCCAACCGGACCACAAGCC +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGADTTW*PTGPQA
Trigger: GGCTTGTGGTCCGGTTGGCCACCAAGTGGTGTCAGC...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTCCGCTGACACCACTTaGTGGCCAACCGGACCACAA +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLESADTT*WPTGPQ
Trigger: TTGTGGTCCGGTTGGCCACCAAGTGGTGTCAGCGGA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAACACGCCAGCAGAGGTaGTCCACAGTTAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQTRQQR*STVRTP
Trigger: GGGCGTCCTAACTGTGGACCACCTCTGCTGGCGTGT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGCCCAAACATGCATATTaGGTGGGTGTGGCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWPKHAY*VGVAPA
Trigger: AGCGGGCGCCACACCCACCCAATATGCATGTTTGGG...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCCAAACATGCATATTaGGTGGGTGTGGCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEPKHAY*VGVAPA
Trigger: AGCGGGCGCCACACCCACCCAATATGCATGTTTGGG...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACATATCTGACTGGGTGCTaGACAGGCCCAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTYLTGC*TGPEAG
Trigger: ACCAGCCTCTGGGCCTGTCCAGCACCCAGTCAGATA...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CATGACAGTGGAGTGAGGATCAGAGGATCAGCCCCCTCCCGTTTCCTGGCACAGGCCAGCAGCCAGCTCTaGACAGTATGCCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HDSGVRIRGSAPSRFLAQASSQL*TVCLQG
Trigger: TCCCTGCAGGCATACTGTCCAGAGCTGGCTGCTGGC...CTGTGCCAGGAAACGGGAGGGGGCTGATCCTCTGATCCTCACTCCACTGTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCGCAGTGCCCGGCGCATaGGTGTGTTGCCATAGAGAC +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLAVPGA*VCCHRD
Trigger: GTCTCTATGGCAACACACCCATGCGCCGGGCACTGC...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGGGCTGGATCCCAGCATaGGCCCCACACCACTGTGTA +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGGWIPA*APHHCV
Trigger: TACACAGTGGTGTGGGGCCCATGCTGGGATCCAGCC...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCGGCTGGATCCCAGCATaGGCCCCACACCACTGTGTA +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLGWIPA*APHHCV
Trigger: TACACAGTGGTGTGGGGCCCATGCTGGGATCCAGCC...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAAGGGCAAAGGTGGGCTaGGGTCAGCTGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLERAKVG*GQLRAW
Trigger: CCAAGCCCTCAGCTGACCCCAGCCCACCTTTGCCCT...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAACTCAGGCAGGAACTCTaGGGCCCGCAGAGTGACACT +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQLRQEL*GPQSDT
Trigger: AGTGTCACTCTGCGGGCCCCAGAGTTCCTGCCTGAG...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGCCATACCAGGCTGGATaGTGCTGGCACTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLPYQAG*CWHCSS
Trigger: ACTGCTGCAGTGCCAGCACCATCCAGCCTGGTATGG...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTCCATACCAGGCTGGATaGTGCTGGCACTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPPYQAG*CWHCSS
Trigger: ACTGCTGCAGTGCCAGCACCATCCAGCCTGGTATGG...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCACCCCACAAGTCCCTaGAGCCTGAGCCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGHPTSP*SLSQSQ
Trigger: CTGACTCTGGCTCAGGCTCCAGGGACTTGTGGGGTG...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTGGGCCCATTCCCTaGGTCTTGCTCTCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEPGPIP*VLLSCC
Trigger: GCAACAAGAGAGCAAGACCCAGGGAATGGGCCCAGG...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR TCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGGCCTGCAGCTTCCGCTaGCACCACTTGGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEACSFR*HHLVAN
Trigger: GTTGGCCACCAAGTGGTGTCAGCGGAAGCTGCAGGC...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCAAGGACAGTTCCTTTTaGTCCACCCCAGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPKDSSF*STPALW
Trigger: CCAGAGCGCTGGGGTGGATCAAAAGGAACTGTCCTT...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCGTGCCTAGAGACAGCTaGCTTCCCAGATTGTGGACC +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPVPRDS*LPRLWT
Trigger: GGTCCACAATCTGGGAAGTCAGCTGTCTCTAGGCAC...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTGTGCCTAGAGACAGCTaGCTTCCCAGATTGTGGACC +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPVPRDS*LPRLWT
Trigger: GGTCCACAATCTGGGAAGTCAGCTGTCTCTAGGCAC...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGGTGCCTAGAGACAGCTaGCTTCCCAGATTGTGGACC +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWVPRDS*LPRLWT
Trigger: GGTCCACAATCTGGGAAGTCAGCTGTCTCTAGGCAC...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTGTCCAGTCGTACCTCTaGAGCACCAACCAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPVQSYL*STNQGR
Trigger: TCTGCCTTGGTTGGTGCTTCAGAGGTACGACTGGAC...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCAGCCCTGCACCACACTaGACCTCCAGAGAGCGGATG +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPSPAPH*TSRERM
Trigger: CATCCGCTCTCTGGAGGTTCAGTGTGGTGCAGGGCT...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAAACTCCACCGAGACTaGGCCGAAAGAGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTKLHRD*AEREEP
Trigger: TGGCTCCTCTCTTTCGGCTCAGTCTCGGTGGAGTTT...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTTGGGCTGGGGTCAGCTaGGGGCTTGGTCAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: DRTQHYCPPCPAANRPGAWAGVS*GLGQEV
Trigger: GACCTCTTGACCAAGCCCTCAGCTGACCCCAGCCCA...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCAACACGAGGTGGGGCTaGGGCACTAGTTGGGACACC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPNTRWG*GTSWDT
Trigger: GGTGTCCCAACTAGTGCCTCAGCCCCACCTCGTGTT...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAGGGGCCGAACTTTGCTaGAGAGGCGGAGAGCTAGCT +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEGAELC*RGGELA
Trigger: AGCTAGCTCTCCGCCTCTTCAGCAAAGTTCGGCCCC...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGGATGCCTATGGGCTCTaGCACCCACAAATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEDAYGL*HPQILV
Trigger: CACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATC...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCGAACAGACCAGGTGCTaGAGAGTGATGCCTATGGGC +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPEQTRC*RVMPMG
Trigger: GCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTC...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATGCCTCACCCCAAACATaGATATTGGGTGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GPIPWVLLSCCLSGPEPDASPQT*ILGGCG
Trigger: GCCACACCCACCCAATATGCATGTTTGGGGTGAGGC...ATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCGGGTATCTGACTGGGTaGTGGACAGGCCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPGYLTG*WTGPEA
Trigger: AGCCTCTGGGCCTGTCCAGCACCCAGTCAGATACCC...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACTGCAGGGAACCTCCATaGCGGCTCAGTGACACACTC +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHCREPP*RLSDTL
Trigger: GAGTGTGTCACTGAGCCGGCATGGAGGTTCCCTGCA...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACTCTGGACAGTATGCCTaGAGGGAACCTCCATGCCGG +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHSGQYA*REPPCR
Trigger: CCGGCATGGAGGTTCCCTGCAGGCATACTGTCCAGA...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CTTGATCAGGACTATCCCCCTACCCTTTCACTTGACCCCAAGGGAATAGGGTCCCGGTTCCGGAGGGTCTaGAGCGCAGGGAAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LDQDYPPTLSLDPKGIGSRFRRV*SAGKGF
Trigger: GAACCCCTTCCCTGCGCTGCAGACCCTCCGGAACCG...GGACCCTATTCCCTTGGGGTCAAGTGAAAGGGTAGGGGGATAGTCCTGATCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGAACAACTCCCCATGCTaGTTCCGAAGGGCGGCCACT +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGNNSPC*FRRAAT
Trigger: AGTGGCCGCCCTTCGGAAGCAGCATGGGGAGTTGTT...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGGGCAACAACTCCCCATaGTGCTTCCGAAGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEGNNSP*CFRRAA
Trigger: GGCCGCCCTTCGGAAGCAGCATGGGGAGTTGTTGCC...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGCAACAACTCCCCATaGTGCTTCCGAAGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: DRTQHYCPPCPAANRPGAGNNSP*CFRRAA
Trigger: GGCCGCCCTTCGGAAGCAGCATGGGGAGTTGTTGCC...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGGACCACTCTGCTCGGTaGCCACAAGTCGACCCATTA +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEDHSAR*PQVDPL
Trigger: TAATGGGTCGACTTGTGGGCACCGAGCAGAGTGGTC...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAGACCACTCTGCTCGGTaGCCACAAGTCGACCCATTA +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTDHSAR*PQVDPL
Trigger: TAATGGGTCGACTTGTGGGCACCGAGCAGAGTGGTC...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGCATGTTCCTCTCCACTaGCACGTTACCCCACGGAAG +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWHVPLH*HVTPRK
Trigger: CTTCCGTGGGGTAACGTGGCAGTGGAGAGGAACATG...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTCAGTGGCCAGCTGGTaGAGGTTCGCCTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPSVASW*RFACSM
Trigger: CATTGAACAGGCGAACCTGCACCAGCTGGCCACTGA...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCCATGGCACAGCCACTaGAGGTCCAGTGTCATGCAG +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGPWHSH*RSSVMQ
Trigger: CTGCATGACACTGGACCTGCAGTGGCTGTGCCATGG...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGATCTGGATGCCCCGTTaGTGGGCAAATGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLIWMPR*WANEAQ
Trigger: TTGGGCCTCATTTGCCCAGCAACGGGGCATCCAGAT...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAATCTGGATGCCCCGTTaGTGGGCAAATGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTIWMPR*WANEAQ
Trigger: TTGGGCCTCATTTGCCCAGCAACGGGGCATCCAGAT...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGACATGGCCCTGACTaGACTCAATCTGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTRHGPD*TQSGCP
Trigger: GGGGCATCCAGATTGAGTGCAGTCAGGGCCATGTCT...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTGCTCCTCCTCAGCTGTaGGATTGCTATGCCGTTGGT +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPAPPQL*DCYAVG
Trigger: ACCAACGGCATAGCAATCGCACAGCTGAGGAGGAGC...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCGCTCCTCCTCAGCTGTaGGATTGCTATGCCGTTGGT +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPAPPQL*DCYAVG
Trigger: ACCAACGGCATAGCAATCGCACAGCTGAGGAGGAGC...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACTACCAGGCTGGATGGTaGTGGCACTGCAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHYQAGW*WHCSSW
Trigger: CCAACTGCTGCAGTGCCAGCACCATCCAGCCTGGTA...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTGAGTCCAGACTACGCTaGCGGTGCTCCTCGATATTC +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPESRLR*RCSSIF
Trigger: GAATATCGAGGAGCACCGGCAGCGTAGTCTGGACTC...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAGAGTCCAGACTACGCTaGCGGTGCTCCTCGATATTC +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTESRLR*RCSSIF
Trigger: GAATATCGAGGAGCACCGGCAGCGTAGTCTGGACTC...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTATGATCCGCTGGACTTaGTGGGCTTGCTGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPMIRWT*WACCAS
Trigger: TGAGGCACAGCAAGCCCAGCAAGTCCAGCGGATCAT...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGTGCCGCACAGCCTCCTaGAAATGCAGTATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLCRTAS*KCSMLL
Trigger: CAGCAGCATACTGCATTTGCAGGAGGCTGTGCGGCA...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCCGTATTTGGGCCACATaGTGCCGCACAGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPRIWAT*CRTASC
Trigger: GCAGGAGGCTGTGCGGCAGCATGTGGCCCAAATACG...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCCGAGTCAAACCCTGTaGCACACCCTTCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVPSQTL*HTLPRA
Trigger: GGCCCTGGGAAGGGTGTGGCACAGGGTTTGACTCGG...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTCCTGCCCTGGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCAGTCAGATCCTGTACTaGAGCCACTCGAATCGCCAA +
Preference number: 4 (lower is better)
Translates to: VLPWAHSLGLALLLPLWPSQILY*SHSNRQ
Trigger: TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACT...GGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCCAGGGCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAACTGTCCACCATGCCCTaGAGCGAACAGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLELSTMP*SEQTRC
Trigger: GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAG...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGAGCGCTCTGGGAGAATaGGGCAGACAGGTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLSALGE*GRQVRN
Trigger: GTTTCTGACCTGTCTGCCCCATTCTCCCAGAGCGCT...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGCGCTCTGGGAGAATaGGGCAGACAGGTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTSALGE*GRQVRN
Trigger: GTTTCTGACCTGTCTGCCCCATTCTCCCAGAGCGCT...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTCCACCCCAGCGCTCTaGGAGAATGGGGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDASTPAL*ENGADR
Trigger: CCTGTCTGCCCCATTCTCCCAGAGCGCTGGGGTGGA...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTCACAGCAGTTGGCTCTaGAAGAGGCCCTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPHSSWL*KRPSCS
Trigger: ACTGCATGAGGGCCTCTTCCAGAGCCAACTGCTGTG...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCCCCTGGCACAGCAGTTaGCTCTGGAAGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPPWHSS*LWKRPS
Trigger: TGAGGGCCTCTTCCAGAGCCAACTGCTGTGCCAGGG...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGCTAGGCTTGGGCCCTaGCACAGCAGTTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLARLGP*HSSWLW
Trigger: CCAGAGCCAACTGCTGTGCCAGGGCCCAAGCCTAGC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGGCTAGGCTTGGGCCCTaGCACAGCAGTTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEARLGP*HSSWLW
Trigger: CCAGAGCCAACTGCTGTGCCAGGGCCCAAGCCTAGC...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAACACGCCAGCAGAGGTaGTCCACAGTTAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLETRQQR*STVRTP
Trigger: GGGCGTCCTAACTGTGGACCACCTCTGCTGGCGTGT...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCATATTGGGTGGGTGTaGCGCCCGCTGAATGTGGGA +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHHIGWV*RPLNVG
Trigger: TCCCACATTCAGCGGGCGCCACACCCACCCAATATG...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAATATCTGACTGGGTGCTaGACAGGCCCAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQYLTGC*TGPEAG
Trigger: ACCAGCCTCTGGGCCTGTCCAGCACCCAGTCAGATA...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACTATCTGACTGGGTGCTaGACAGGCCCAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHYLTGC*TGPEAG
Trigger: ACCAGCCTCTGGGCCTGTCCAGCACCCAGTCAGATA...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCCTTGAATCCCCACAGTaGACGTCTCTGCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPLESPQ*TSLHCP
Trigger: TGGGCAGTGCAGAGACGTCCACTGTGGGGATTCAAG...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCGGAAAGGCTGAGCACTaGGGTAGGGATGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPGKAEH*GRDVRG
Trigger: GCCCCTGACATCCCTACCCCAGTGCTCAGCCTTTCC...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAGCAGTGCCCGGCGCATaGGTGTGTTGCCATAGAGAC +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEAVPGA*VCCHRD
Trigger: GTCTCTATGGCAACACACCCATGCGCCGGGCACTGC...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATGGTCAGCTGAGGGCTTaGTCAAGAGGTCCACACACT +
Preference number: 4 (lower is better)
Translates to: GPIPWVLLSCCLSGPEPDGQLRA*SRGPHT
Trigger: AGTGTGTGGACCTCTTGACCAAGCCCTCAGCTGACC...ATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAGGTCAGCTGAGGGCTTaGTCAAGAGGTCCACACACT +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTGQLRA*SRGPHT
Trigger: AGTGTGTGGACCTCTTGACCAAGCCCTCAGCTGACC...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTCCTGCCCTGGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCATGTGCCAGTCTCCATaGAACAGAAGACGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: VLPWAHSLGLALLLPLWPMCQSP*NRRRLL
Trigger: CAAGAGCCGTCTTCTGTTCCATGGAGACTGGCACAT...GGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCCAGGGCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTGTATGGATCCTCAGTaGCCAGCTGGTGCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLECMDPQ*PAGAGS
Trigger: CGAACCTGCACCAGCTGGCCACTGAGGATCCATACA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTGGGACACCCCGCTTTaGCTTTTTGGCTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEWDTPL*LFGWHL
Trigger: CAGATGCCAGCCAAAAAGCCAAAGCGGGGTGTCCCA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTGGCACTGCAGCAGTTaGGCTTTGGCAGCTGACACA +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEWHCSS*ALAADT
Trigger: TGTGTCAGCTGCCAAAGCCCAACTGCTGCAGTGCCA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGATCACCATACCAGGCTaGATGGTGCTGGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEITIPG*MVLALQ
Trigger: CTGCAGTGCCAGCACCATCCAGCCTGGTATGGTGAT...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCATCCGCTGGACTTGCTaGGCTTGCTGTGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLIRWTC*ACCASA
Trigger: AGCTGAGGCACAGCAAGCCCAGCAAGTCCAGCGGAT...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTCGCGAAATGATCCGCTaGACTTGCTGGGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPREMIR*TCWACC
Trigger: ACAGCAAGCCCAGCAAGTCCAGCGGATCATTTCGCG...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTCCAGCTGTCGTATTTaGGCCACATGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPSSCRI*ATCCRT
Trigger: TGTGCGGCAGCATGTGGCCCAAATACGACAGCTGGA...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGCTTCCCAGGGCCCAGTaGTACTGCATCATCTGTTGC +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWLPRAQ*YCIICC
Trigger: GCAACAGATGATGCAGTACCACTGGGCCCTGGGAAG...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACACTTCCCAGGGCCCAGTaGTACTGCATCATCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTLPRAQ*YCIICC
Trigger: GCAACAGATGATGCAGTACCACTGGGCCCTGGGAAG...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCCACCCCACAAGTCCCTaGAGCCTGAGCCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPHPTSP*SLSQSQ
Trigger: CTGACTCTGGCTCAGGCTCCAGGGACTTGTGGGGTG...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATACCCACAAATCCTCGTaGATAACGGGAAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GPIPWVLLSCCLSGPEPDTHKSS*ITGSPS
Trigger: GGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT...ATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR TCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGAAGGACAGTTCCTTTTaGTCCACCCCAGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGKDSSF*STPALW
Trigger: CCAGAGCGCTGGGGTGGATCAAAAGGAACTGTCCTT...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGAGCAGGTGCAGCCAGTaGGAGAATTCCTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEESRCSQ*ENSWCR
Trigger: CCGGCACCAGGAATTCTCTCACTGGCTGCACCTGCT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCGGATGCTTTGTGGCCTaGGGTGCTGGTAATCCAGAG +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLGCFVA*GAGNPE
Trigger: CTCTGGATTACCAGCACCTCAGGCCACAAAGCATCC...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACGGATGCTTTGTGGCCTaGGGTGCTGGTAATCCAGAG +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHGCFVA*GAGNPE
Trigger: CTCTGGATTACCAGCACCTCAGGCCACAAAGCATCC...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCGTTAGGACGCCCCGCTaGTGGATGCTTTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCVRTPR*WMLCGL
Trigger: CAGGCCACAAAGCATCCATCAGCGGGGCGTCCTAAC...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGTTGGGCACAGGTATCTaGTGCTTCCACCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWLGTGI*CFHLKS
Trigger: GGACTTCAGGTGGAAGCATCAGATACCTGTGCCCAA...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCGTCCAGTCGTACCTCTaGAGCACCAACCAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLVQSYL*STNQGR
Trigger: TCTGCCTTGGTTGGTGCTTCAGAGGTACGACTGGAC...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGGCTAACACAAGTCCTTaGATCCCCACAGTGGACGTC +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWANTSP*IPTVDV
Trigger: GACGTCCACTGTGGGGATTCAAGGACTTGTGTTAGC...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGCTAACACAAGTCCTTaGATCCCCACAGTGGACGTC +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLANTSP*IPTVDV
Trigger: GACGTCCACTGTGGGGATTCAAGGACTTGTGTTAGC...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAAAACTCCACCGAGACTaGGCCGAAAGAGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQKLHRD*AEREEP
Trigger: TGGCTCCTCTCTTTCGGCTCAGTCTCGGTGGAGTTT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCAAGCACGAGTCCCTTaGTGTAGTCCCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGQARVP*CSPFSH
Trigger: GTGGCTGAAGGGACTACATCAAGGGACTCGTGCTTG...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCAAGCACGAGTCCCTTaGTGTAGTCCCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHQARVP*CSPFSH
Trigger: GTGGCTGAAGGGACTACATCAAGGGACTCGTGCTTG...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCACCGTGGATAGTCCCTaGTCCGAACCAGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPTVDSP*SEPESS
Trigger: AGAGCTTTCTGGTTCGGATCAGGGACTATCCACGGT...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGAGTGACACTATGGTaGTCATGGGGGTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWRVTLW*SWGFPW
Trigger: CCATGGGAACCCCCATGATCACCATAGTGTCACTCT...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGAGAGTGACACTATGGTaGTCATGGGGGTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLERVTLW*SWGFPW
Trigger: CCATGGGAACCCCCATGATCACCATAGTGTCACTCT...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGTATGCCGTTGGTAGGTaGGGGAGGACAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGYAVGR*GRTSSA
Trigger: TGCTGAGCTTGTCCTCCCTCACCTACCAACGGCATA...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCAACACGAGGTGGGGCTaGGGCACTAGTTGGGACACC +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCNTRWG*GTSWDT
Trigger: GGTGTCCCAACTAGTGCCTCAGCCCCACCTCGTGTT...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTTGGCAGCTGACACAATaGCACAGCCTTCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPWQLTQ*HSLLSL
Trigger: CAGAGACAGAAGGCTGTGTCATTGTGTCAGCTGCCA...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTTGGGCTTTGGCAGCTaGCACAATGACACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLELGFGS*HNDTAF
Trigger: GAAGGCTGTGTCATTGTGTCAGCTGCCAAAGCCCAA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAAGTTGCAACGCGAAATaGTCCGCTGGACTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQSCNAK*SAGLAG
Trigger: CCCAGCAAGTCCAGCGGATCATTTCGCGTTGCAACT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAGGAGCAGCAGGTTGTTaGCAATGTCCAGGATCATGG +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTGAAGC*QCPGSW
Trigger: CCATGATCCTGGACATTGTCAACAACCTGCTGCTCC...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTGGAGCAGCAGGTTGTTaGCAATGTCCAGGATCATGG +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPGAAGC*QCPGSW
Trigger: CCATGATCCTGGACATTGTCAACAACCTGCTGCTCC...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGGAGCAGCAGGTTGTTaGCAATGTCCAGGATCATGG +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLGAAGC*QCPGSW
Trigger: CCATGATCCTGGACATTGTCAACAACCTGCTGCTCC...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGTCTCAAGCTGGAACCTaGCCCGTTGCTTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWSQAGT*PVASSH
Trigger: GTGAGAAGAAGCAACGGGTCAGGTTCCAGCTTGAGA...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGGGGCCGAACTTTGCTaGAGAGGCGGAGAGCTAGCT +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLGAELC*RGGELA
Trigger: AGCTAGCTCTCCGCCTCTTCAGCAAAGTTCGGCCCC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTTGCGAAATGACCTTCTaGCCCCAGAACTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPCEMTF*PQNSES
Trigger: TGACTCGGAGTTCTGGGGTCAGAAGGTCATTTCGCA...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTCTCACCCTTGTAGCTaGCACACAGTGGAACCTGTG +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLESHPCS*HTVEPV
Trigger: CACAGGTTCCACTGTGTGTCAGCTACAAGGGTGAGA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCGCCTTAGCTTCTCTTTaGTTACCTGGGCAACCAGGG +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPALASL*LPGQPG
Trigger: CCCTGGTTGCCCAGGTAATCAAAGAGAAGCTAAGGC...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCAGTCAAGTCCCTGGAGCCTaGGCCAGAGTCAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: PFPGSCSLVASLALSLISQVPGA*ARVRSC
Trigger: ACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTG...ACTGATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR TCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACGATGCCTATGGGCTCTaGCACCCACAAATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHDAYGL*HPQILV
Trigger: CACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATC...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGGAACAGACCAGGTGCTaGAGAGTGATGCCTATGGGC +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGEQTRC*RVMPMG
Trigger: GCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTC...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp TCGCTCAGTACCAGTACCCCGACCCATGAACCTTCCAGCAGCAGTTCAGTGCTCCAGTACCCCGACCCATaGACCTTCCAGCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SLSTSTPTHEPSSSSSVLQYPDP*TFQQQF
Trigger: GAACTGCTGCTGGAAGGTTCATGGGTCGGGGTACTG...GAGCACTGAACTGCTGCTGGAAGGTTCATGGGTCGGGGTACTGGTACTGAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR GCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGGTGATAGCAGTGAGATaGCGACTGCTAATGCCCACC +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWVIAVR*RLLMPT
Trigger: GGTGGGCATTAGCAGTCGGCATCTCACTGCTATCAC...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGTCAATGGTGGTCACCTaGACACTAGCCTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWSMVVT*TLALRE
Trigger: CTCCCTCAAGGCTAGTGTGCAGGTGACCACCATTGA...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCGCCTCACCCCAAACATaGATATTGGGTGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLASPQT*ILGGCG
Trigger: GCCACACCCACCCAATATGCATGTTTGGGGTGAGGC...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCGGGTATCTGACTGGGTaGTGGACAGGCCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCGYLTG*WTGPEA
Trigger: AGCCTCTGGGCCTGTCCAGCACCCAGTCAGATACCC...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTGCAGGGAACCTCCATaGCGGCTCAGTGACACACTC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPCREPP*RLSDTL
Trigger: GAGTGTGTCACTGAGCCGGCATGGAGGTTCCCTGCA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCTGGACAGTATGCCTaGAGGGAACCTCCATGCCGG +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPSGQYA*REPPCR
Trigger: CCGGCATGGAGGTTCCCTGCAGGCATACTGTCCAGA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACAGCTCAGGTAGCAGCTaGACCTCCACCTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHSSGSS*TSTSLK
Trigger: CTTCAAGGAGGTGGAGGTGCAGCTGCTACCTGAGCT...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAAGCTCAGGTAGCAGCTaGACCTCCACCTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQSSGSS*TSTSLK
Trigger: CTTCAAGGAGGTGGAGGTGCAGCTGCTACCTGAGCT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGAGCTCCTCAATTTTaGGGGCAGGCAACAACTCCC +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWRAPQF*GQATTP
Trigger: GGGAGTTGTTGCCTGCCCGCAAAATTGAGGAGCTCT...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCAGAGCTCCTCAATTTTaGGGGCAGGCAACAACTCCC +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPRAPQF*GQATTP
Trigger: GGGAGTTGTTGCCTGCCCGCAAAATTGAGGAGCTCT...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTAGAGCTCCTCAATTTTaGGGGCAGGCAACAACTCCC +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPRAPQF*GQATTP
Trigger: GGGAGTTGTTGCCTGCCCGCAAAATTGAGGAGCTCT...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCGCTCCAAGTAAGCAGTaGCCGGCGCATGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPAPSKQ*PAHGCV
Trigger: AACACACCCATGCGCCGGGCACTGCTTACTTGGAGC...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACACAGGGGGAAAAGGGCTaGCTGGATCAAGCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTQGEKG*LDQALE
Trigger: TTCAAGAGCTTGATCCAGGCAGCCCTTTTCCCCCTG...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACATGCACTCAATCTGGATaGCCCGTTGCTGGGCAAATG +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTCTQSG*PVAGQM
Trigger: CATTTGCCCAGCAACGGGGCATCCAGATTGAGTGCA...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCGGATGGTGCTGGCACTaGAGCAGTTGGGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPGWCWH*SSWALA
Trigger: TGCCAAAGCCCAACTGCTGCAGTGCCAGCACCATCC...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCTCTCCATCAGCTCCTaGACAGAGTCCAGACTACGC +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHLSISS*TESRLR
Trigger: GCGTAGTCTGGACTCTGTGCAGGAGCTGATGGAGAG...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCAACCATGCCGCCCACTaGCTGCCCACTCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDANHAAH*LPTLHQ
Trigger: CTGATGGAGAGTGGGCAGGCAGTGGGCGGCATGGTT...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTTGCTGGGCTTGCTGTaGCTCAGCTGGCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPLLGLL*LSWLVP
Trigger: TGGAACCAGCCAGCTGAGGCACAGCAAGCCCAGCAA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTACAGCCTCCTGCAAATaGAGTATGCTGCTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPTASCK*SMLLRC
Trigger: GCAACGCAGCAGCATACTGCATTTGCAGGAGGCTGT...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCTGCCGCACAGCCTCCTaGAAATGCAGTATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLCRTAS*KCSMLL
Trigger: CAGCAGCATACTGCATTTGCAGGAGGCTGTGCGGCA...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGTCTTCACTTTCCAGCTaGAGGTTGGCCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLSSLSS*RLAFSW
Trigger: CCAGGAGAAGGCCAACCTGCAGCTGGAAAGTGAAGA...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTCTTCACTTTCCAGCTaGAGGTTGGCCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLESSLSS*RLAFSW
Trigger: CCAGGAGAAGGCCAACCTGCAGCTGGAAAGTGAAGA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTGTCAGGCGCCACCGTaGCTGAGCAAAGTAAAACTC +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLECQAPP*LSKVKL
Trigger: GAGTTTTACTTTGCTCAGGCACGGTGGCGCCTGACA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGCATTACTGTCCACCATaGCCTGCAGCGAACAGACCA +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLHYCPP*PAANRP
Trigger: TGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATG...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCGCTGACACCACTTaGTGGCCAACCGGACCACAA +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPSADTT*WPTGPQ
Trigger: TTGTGGTCCGGTTGGCCACCAAGTGGTGTCAGCGGA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CAGCTGATCCTCATCACGGTGGTACAGGAACTGCAGCAGCTTCAGAGTCCAAGTTCCACCCCAGCGCTCTaGGAGAATGGGGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: QLILITVVQELQQLQSPSSTPAL*ENGADR
Trigger: CCTGTCTGCCCCATTCTCCCAGAGCGCTGGGGTGGA...ACTTGGACTCTGAAGCTGCTGCAGTTCCTGTACCACCGTGATGAGGATCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR CCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAACACAGCAGTTGGCTCTaGAAGAGGCCCTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQHSSWL*KRPSCS
Trigger: ACTGCATGAGGGCCTCTTCCAGAGCCAACTGCTGTG...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCGACCCATGAACCTTCCAGCAGCAGTTCAGTGCTCATCTGTGCCATATCAGAGGCTAGGCTTGGGCCCTaGCACAGCAGTTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PTHEPSSSSSVLICAISEARLGP*HSSWLW
Trigger: CCAGAGCCAACTGCTGTGCCAGGGCCCAAGCCTAGC...CTCTGATATGGCACAGATGAGCACTGAACTGCTGCTGGAAGGTTCATGGGTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR CCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAGGTGAACTAGACCCTTaGGTTTCCAGTGCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTGELDP*VSSASR
Trigger: CCTGCTAGCACTGGAAACCCAAGGGTCTAGTTCACC...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCGGTGAACTAGACCCTTaGGTTTCCAGTGCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPGELDP*VSSASR
Trigger: CCTGCTAGCACTGGAAACCCAAGGGTCTAGTTCACC...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAACATATTGGGTGGGTGTaGCGCCCGCTGAATGTGGGA +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEHIGWV*RPLNVG
Trigger: TCCCACATTCAGCGGGCGCCACACCCACCCAATATG...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCCATATTGGGTGGGTGTaGCGCCCGCTGAATGTGGGA +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPHIGWV*RPLNVG
Trigger: TCCCACATTCAGCGGGCGCCACACCCACCCAATATG...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTAAAAGGGTATCTGACTaGGTGCTGGACAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPKRVSD*VLDRPR
Trigger: TCTGGGCCTGTCCAGCACCCAGTCAGATACCCTTTT...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATGGAAAGGCTGAGCACTaGGGTAGGGATGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNGKAEH*GRDVRG
Trigger: GCCCCTGACATCCCTACCCCAGTGCTCAGCCTTTCC...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGGGAAAGGCTGAGCACTaGGGTAGGGATGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEGKAEH*GRDVRG
Trigger: GCCCCTGACATCCCTACCCCAGTGCTCAGCCTTTCC...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCGGCACTGTAGAGTaGCCAGGACATGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGLGTVE*PGHAGT
Trigger: TGTACCAGCATGTCCTGGCCACTCTACAGTGCCGAG...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCCTCGGCACTGTAGAGTaGCCAGGACATGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLLGTVE*PGHAGT
Trigger: TGTACCAGCATGTCCTGGCCACTCTACAGTGCCGAG...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCGCCAGCAGCCAGCTCTaGACAGTATGCCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAASSQL*TVCLQG
Trigger: TCCCTGCAGGCATACTGTCCAGAGCTGGCTGCTGGC...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGGCCAGCAGCCAGCTCTaGACAGTATGCCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVASSQL*TVCLQG
Trigger: TCCCTGCAGGCATACTGTCCAGAGCTGGCTGCTGGC...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGGAGTGGGACAGGGCTTaGAGAGGCCCAAGCACGAGT +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEEWDRA*RGPSTS
Trigger: ACTCGTGCTTGGGCCTCTCCAAGCCCTGTCCCACTC...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGAGTGGGACAGGGCTTaGAGAGGCCCAAGCACGAGT +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLEWDRA*RGPSTS
Trigger: ACTCGTGCTTGGGCCTCTCCAAGCCCTGTCCCACTC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCGCAGTGCCCGGCGCATaGGTGTGTTGCCATAGAGAC +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAAVPGA*VCCHRD
Trigger: GTCTCTATGGCAACACACCCATGCGCCGGGCACTGC...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCACATGCTCAGGACCATaGAAGGAGGCATCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPTCSGP*KEASAR
Trigger: TCTGGCAGATGCCTCCTTCCATGGTCCTGAGCATGT...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAGGGAAAAGGGCTGCCTaGATCAAGCTCTTGAACCTG +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTGKRAA*IKLLNL
Trigger: CAGGTTCAAGAGCTTGATCCAGGCAGCCCTTTTCCC...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGGGGAAAAGGGCTGCCTaGATCAAGCTCTTGAACCTG +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEGKRAA*IKLLNL
Trigger: CAGGTTCAAGAGCTTGATCCAGGCAGCCCTTTTCCC...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCGGCTGGATCCCAGCATaGGCCCCACACCACTGTGTA +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCGWIPA*APHHCV
Trigger: TACACAGTGGTGTGGGGCCCATGCTGGGATCCAGCC...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCTGTATGGATCCTCAGTaGCCAGCTGGTGCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLCMDPQ*PAGAGS
Trigger: CGAACCTGCACCAGCTGGCCACTGAGGATCCATACA...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTCATGGGGGTTCCCATaGCACAGCCACTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEESWGFP*HSHCRS
Trigger: GGACCTGCAGTGGCTGTGCCATGGGAACCCCCATGA...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGCTCAGGCAGGAACTCTaGGGCCCGCAGAGTGACACT +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEELRQEL*GPQSDT
Trigger: AGTGTCACTCTGCGGGCCCCAGAGTTCCTGCCTGAG...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTCAGGCTGGATGGTGCTaGCACTGCAGCAGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: DRTQHYCPPCPAANRPGAQAGWC*HCSSWA
Trigger: AGCCCAACTGCTGCAGTGCCAGCACCATCCAGCCTG...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGATCACCATACCAGGCTaGATGGTGCTGGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGITIPG*MVLALQ
Trigger: CTGCAGTGCCAGCACCATCCAGCCTGGTATGGTGAT...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTTGGGGCTGCTTTCAGTaGTGGCAAAGTACTGCATGC +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPWGCFQ*WQSTAC
Trigger: GCATGCAGTACTTTGCCACCACTGAAAGCAGCCCCA...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGTGGGGCTGCTTTCAGTaGTGGCAAAGTACTGCATGC +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWWGCFQ*WQSTAC
Trigger: GCATGCAGTACTTTGCCACCACTGAAAGCAGCCCCA...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCATCCGCTGGACTTGCTaGGCTTGCTGTGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPIRWTC*ACCASA
Trigger: AGCTGAGGCACAGCAAGCCCAGCAAGTCCAGCGGAT...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCGCGAAATGATCCGCTaGACTTGCTGGGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHREMIR*TCWACC
Trigger: ACAGCAAGCCCAGCAAGTCCAGCGGATCATTTCGCG...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAGACTGGCAGGAGCTCTaGGGCCGCAGTATTGCCTTA +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEDWQEL*GRSIAL
Trigger: TAAGGCAATACTGCGGCCCCAGAGCTCCTGCCAGTC...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389003.7
CDS-3UTR CCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCAACTGGTGTGTCAGCTaGATGGTGAGAGGCACCACA +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPNWCVS*MVRGTT
Trigger: TGTGGTGCCTCTCACCATCCAGCTGACACACCAGTT...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGAACTGGTGTGTCAGCTaGATGGTGAGAGGCACCACA +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLENWCVS*MVRGTT
Trigger: TGTGGTGCCTCTCACCATCCAGCTGACACACCAGTT...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTCCGAGGCTTCACCACTaGTATTCCAGTAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPPRLHH*YSSSHQ
Trigger: CTGGTGACTACTGGAATACCAGTGGTGAAGCCTCGG...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACACCCACAAATCCTCGTaGATAACGGGAAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHTHKSS*ITGSPS
Trigger: GGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCAGTGACTGGCAGGAGCTCTaGGGCCGCAGTACTACCTTA +
Preference number: 4 (lower is better)
Translates to: PFPGSCSLVASLALSLISDWQEL*GRSTTL
Trigger: TAAGGTAGTACTGCGGCCCCAGAGCTCCTGCCAGTC...ACTGATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCAATAGGGTCCTGCCCTaGGCCCATTCCCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPNRVLP*AHSLGL
Trigger: AAGACCCAGGGAATGGGCCCAGGGCAGGACCCTATT...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR TCA 90 bp TGCAGTTCAGCATGGAGTGTCCACACATCCACAGTGATAGCAGTGAGATGCCGAGCCTGCAGCTTCCGCTaGCACCACTTGGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: CSSAWSVHTSTVIAVRCRACSFR*HHLVAN
Trigger: GTTGGCCACCAAGTGGTGTCAGCGGAAGCTGCAGGC...TCGGCATCTCACTGCTATCACTGTGGATGTGTGGACACTCCATGCTGAACTGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR TCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACATCTGTAGGTCCGTTCTaGTACGCACTTCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTSVGPF*YALLQS
Trigger: GCTTTGGAGAAGTGCGTATCAGAACGGACCTACAGA...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGTCTGTAGGTCCGTTCTaGTACGCACTTCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLSVGPF*YALLQS
Trigger: GCTTTGGAGAAGTGCGTATCAGAACGGACCTACAGA...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCAGGTGTCCTCCAGCTaGCCACTCTTTAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEQVSSS*PLFRTL
Trigger: CAAAGTTCTAAAGAGTGGTCAGCTGGAGGACACCTG...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCCAGGTGTCCTCCAGCTaGCCACTCTTTAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPQVSSS*PLFRTL
Trigger: CAAAGTTCTAAAGAGTGGTCAGCTGGAGGACACCTG...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGCTTCGAAGGGGCAGCTaGTCCTCATCACGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEELRRGS*SSSRWY
Trigger: GTACCACCGTGATGAGGATCAGCTGCCCCTTCGAAG...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGTATCAGAGTTTGCTGTaGAGCTTCGAAGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLYQSLL*SFEGAA
Trigger: AGCTGCCCCTTCGAAGCTTCACAGCAAACTCTGATA...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACATATCAGAGTTTGCTGTaGAGCTTCGAAGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTYQSLL*SFEGAA
Trigger: AGCTGCCCCTTCGAAGCTTCACAGCAAACTCTGATA...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGCTACCCTGTAGTGTaGAGGAGTCCAGAACAAGTG +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTSYPVV*RSPEQV
Trigger: CACTTGTTCTGGACTCCTTCACACTACAGGGTAGCT...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGAGCTACCCTGTAGTGTaGAGGAGTCCAGAACAAGTG +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLESYPVV*RSPEQV
Trigger: CACTTGTTCTGGACTCCTTCACACTACAGGGTAGCT...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGCACAGATTCCCCAAATaGAGAGTGCCTAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWHRFPK*RVPRDS
Trigger: GCTGTCTCTAGGCACTCTTCATTTGGGGAATCTGTG...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGTTGCATCTTCTCCGTaGCTGATTTCACCAGCGCTA +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLVASSP*LISPAL
Trigger: TAGCGCTGGTGAAATCAGTCACGGAGAAGATGCAAC...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATGTTGCATCTTCTCCGTaGCTGATTTCACCAGCGCTA +
Preference number: 4 (lower is better)
Translates to: GPIPWVLLSCCLSGPEPDVASSP*LISPAL
Trigger: TAGCGCTGGTGAAATCAGTCACGGAGAAGATGCAAC...ATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR TCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAATGCTGCTGTGATAGGTaGTGGAGAGCATGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQCCCDR*WRAWKG
Trigger: GCCTTTCCATGCTCTCCATCACCTATCACAGCAGCA...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCTGCTGCTGTGATAGGTaGTGGAGAGCATGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLCCCDR*WRAWKG
Trigger: GCCTTTCCATGCTCTCCATCACCTATCACAGCAGCA...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGCCTGGATCAAGCTCTTaGACCTGTTCTACCACATGC +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLPGSSS*TCSTTC
Trigger: GCATGTGGTAGAACAGGTTCAAGAGCTTGATCCAGG...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAATTCTCTTCAGTGGGTaGGGCCATCAGGTGAACGGT +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQILFSG*GHQVNG
Trigger: ACCGTTCACCTGATGGCCTCACCCACTGAAGAGAAT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACTGGCAGCTGACACAATaGCACAGCCTTCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHWQLTQ*HSLLSL
Trigger: CAGAGACAGAAGGCTGTGTCATTGTGTCAGCTGCCA...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAAGTTGCAACGCGAAATaGTCCGCTGGACTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLESCNAK*SAGLAG
Trigger: CCCAGCAAGTCCAGCGGATCATTTCGCGTTGCAACT...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACTCTCAAGCTGGAACCTaGCCCGTTGCTTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHSQAGT*PVASSH
Trigger: GTGAGAAGAAGCAACGGGTCAGGTTCCAGCTTGAGA...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCGTGTCAGCTGGATGGTaGGAGGCACCACATTTACCT +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLVSAGW*EAPHLP
Trigger: AGGTAAATGTGGTGCCTCTCACCATCCAGCTGACAC...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAGTGTCAGCTGGATGGTaGGAGGCACCACATTTACCT +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQVSAGW*EAPHLP
Trigger: AGGTAAATGTGGTGCCTCTCACCATCCAGCTGACAC...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAATCTCACCCTTGTAGCTaGCACACAGTGGAACCTGTG +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQSHPCS*HTVEPV
Trigger: CACAGGTTCCACTGTGTGTCAGCTACAAGGGTGAGA...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCCACACTTAAACCAATaGGGAGCCGGGCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGPHLNQ*GAGLSP
Trigger: AGGAGAAAGCCCGGCTCCTCATTGGTTTAAGTGTGG...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCCCACACTTAAACCAATaGGGAGCCGGGCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLPHLNQ*GAGLSP
Trigger: AGGAGAAAGCCCGGCTCCTCATTGGTTTAAGTGTGG...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGCAAGTCCCTGGAGCCTaGGCCAGAGTCAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEQVPGA*ARVRSC
Trigger: ACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTG...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCAAGTCCCTGGAGCCTaGGCCAGAGTCAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVQVPGA*ARVRSC
Trigger: ACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTG...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCTGCACACTAGCCTTGAGGGAGTTGAGGCAGACAATGCGTTGGCGACTCTGACCTGGTCTGGCAGCTaGACAGGGAACAGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: HLHTSLEGVEADNALATLTWSGS*TGNRLR
Trigger: TCTAAGCCTGTTCCCTGTTCAGCTGCCAGACCAGGT...CAGAGTCGCCAACGCATTGTCTGCCTCAACTCCCTCAAGGCTAGTGTGCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581267.1
CDS-3UTR GCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCGTGATAGCAGTGAGATaGCGACTGCTAATGCCCACC +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLVIAVR*RLLMPT
Trigger: GGTGGGCATTAGCAGTCGGCATCTCACTGCTATCAC...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCCAGCAGCAGTTCAGTaGTCATCTGTGCCATATCAG +
Preference number: 4 (lower is better)
Translates to: GPIPWVLLSCCLSGPEPDPAAVQ*SSVPYQ
Trigger: CTGATATGGCACAGATGAGCACTGAACTGCTGCTGG...ATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAATCAATGGTGGTCACCTaGACACTAGCCTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQSMVVT*TLALRE
Trigger: CTCCCTCAAGGCTAGTGTGCAGGTGACCACCATTGA...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCGCCTCACCCCAAACATaGATATTGGGTGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPASPQT*ILGGCG
Trigger: GCCACACCCACCCAATATGCATGTTTGGGGTGAGGC...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTGGAGTCCAGAACAAGTaGCTCACCCCAAACATGCAT +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPGVQNK*LTPNMH
Trigger: ATGCATGTTTGGGGTGAGGCACTTGTTCTGGACTCC...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAGGAGTCCAGAACAAGTaGCTCACCCCAAACATGCAT +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTGVQNK*LTPNMH
Trigger: ATGCATGTTTGGGGTGAGGCACTTGTTCTGGACTCC...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGGCCTTGCAACAGGGTTaGATCTTCTCCGTGACTGAT +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEALQQG*IFSVTD
Trigger: ATCAGTCACGGAGAAGATGCAACCCTGTTGCAAGGC...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGCAGGGAACCTCCATaGCGGCTCAGTGACACACTC +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEECREPP*RLSDTL
Trigger: GAGTGTGTCACTGAGCCGGCATGGAGGTTCCCTGCA...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCCAGCTCTGGACAGTATaGCTGCAGGGAACCTCCATG +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPQLWTV*LQGTSM
Trigger: CATGGAGGTTCCCTGCAGGCATACTGTCCAGAGCTG...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCAACAACTCCCCATGCTaGTTCCGAAGGGCGGCCACT +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCNNSPC*FRRAAT
Trigger: AGTGGCCGCCCTTCGGAAGCAGCATGGGGAGTTGTT...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCGGCGCATGGGTGTGTTaGCATAGAGACGACGGGAAC +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAGAWVC*HRDDGN
Trigger: GTTCCCGTCGTCTCTATGGCAACACACCCATGCGCC...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCGCTCCAAGTAAGCAGTaGCCGGCGCATGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCAPSKQ*PAHGCV
Trigger: AACACACCCATGCGCCGGGCACTGCTTACTTGGAGC...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCACCTGTTCTACCACATaGTCAGGACCATGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPTCSTT*SGPWKE
Trigger: CTCCTTCCATGGTCCTGAGCATGTGGTAGAACAGGT...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCAGTGGCCAGCTGGTaGAGGTTCGCCTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLESVASW*RFACSM
Trigger: CATTGAACAGGCGAACCTGCACCAGCTGGCCACTGA...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGTGCACTCAATCTGGATaGCCCGTTGCTGGGCAAATG +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGCTQSG*PVAGQM
Trigger: CATTTGCCCAGCAACGGGGCATCCAGATTGAGTGCA...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCGCTCCTCCTCAGCTGTaGGATTGCTATGCCGTTGGT +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPAPPQL*DCYAVG
Trigger: ACCAACGGCATAGCAATCGCACAGCTGAGGAGGAGC...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATGGATGGTGCTGGCACTaGAGCAGTTGGGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNGWCWH*SSWALA
Trigger: TGCCAAAGCCCAACTGCTGCAGTGCCAGCACCATCC...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAACCTGCTCTGTGGGGCTaGTTTCAGTGGTGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEPALWG*FQWWQS
Trigger: ACTTTGCCACCACTGAAAGCAGCCCCACAGAGCAGG...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCCTCTCCATCAGCTCCTaGACAGAGTCCAGACTACGC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPLSISS*TESRLR
Trigger: GCGTAGTCTGGACTCTGTGCAGGAGCTGATGGAGAG...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGTTGCTGGGCTTGCTGTaGCTCAGCTGGCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVLLGLL*LSWLVP
Trigger: TGGAACCAGCCAGCTGAGGCACAGCAAGCCCAGCAA...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGTCCACAGCCCCTTCCTaGTTCTTTAGGAGATCTTCC +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWSTAPS*FFRRSS
Trigger: GGAAGATCTCCTAAAGAAGCAGGAAGGGGCTGTGGA...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTCCACAGCCCCTTCCTaGTTCTTTAGGAGATCTTCC +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPSTAPS*FFRRSS
Trigger: GGAAGATCTCCTAAAGAAGCAGGAAGGGGCTGTGGA...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAACAGCCTCCTGCAAATaGAGTATGCTGCTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQTASCK*SMLLRC
Trigger: GCAACGCAGCAGCATACTGCATTTGCAGGAGGCTGT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCAGTTGCCGCACAGCCTCCTaGAAATGCAGTATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PFPGSCSLVASLALSLISCRTAS*KCSMLL
Trigger: CAGCAGCATACTGCATTTGCAGGAGGCTGTGCGGCA...ACTGATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp CCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCAGTATTTGGGCCACATGCTaGCGCACAGCCTCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: PFPGSCSLVASLALSLISIWATC*RTASCK
Trigger: TTTGCAGGAGGCTGTGCGGCAGCATGTGGCCCAAAT...ACTGATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGTGTCAGGCGCCACCGTaGCTGAGCAAAGTAAAACTC +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGCQAPP*LSKVKL
Trigger: GAGTTTTACTTTGCTCAGGCACGGTGGCGCCTGACA...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAATCTGTTGCAATCAGCTaGCGAGGCTTCACCACTGGT +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQSVAIS*RGFTTG
Trigger: ACCAGTGGTGAAGCCTCGGCAGCTGATTGCAACAGA...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGGGCCCAGTGGTACTaGATCATCTGTTGCAATCAG +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTRAQWY*IICCNQ
Trigger: CTGATTGCAACAGATGATGCAGTACCACTGGGCCCT...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGCAAAGATGGACTTCTTaGCAGGGTTCTTGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWQRWTS*QGSCRP
Trigger: TGGGCGACAAGAACCCTGGCAAGAAGTCCATCTTTG...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCATTCCCTGGGTCTTaGTCTCTTGTTGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHPFPGS*SLVASL
Trigger: CAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGG...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTCCGCTGACACCACTTaGTGGCCAACCGGACCACAA +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCSADTT*WPTGPQ
Trigger: TTGTGGTCCGGTTGGCCACCAAGTGGTGTCAGCGGA...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ATGCCCACCTTTAGACACAGGTCCAGGGCCAGTGAAAGCTCCACTAGGCAGGTGCACAGCAGTTGGCTCTaGAAGAGGCCCTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: MPTFRHRSRASESSTRQVHSSWL*KRPSCS
Trigger: ACTGCATGAGGGCCTCTTCCAGAGCCAACTGCTGTG...CACCTGCCTAGTGGAGCTTTCACTGGCCCTGGACCTGTGTCTAAAGGTGGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR CCA 90 bp CCGACCCATGAACCTTCCAGCAGCAGTTCAGTGCTCATCTGTGCCATATCAGAGCCCTGGCACAGCAGTTaGCTCTGGAAGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PTHEPSSSSSVLICAISEPWHSS*LWKRPS
Trigger: TGAGGGCCTCTTCCAGAGCCAACTGCTGTGCCAGGG...CTCTGATATGGCACAGATGAGCACTGAACTGCTGCTGGAAGGTTCATGGGTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR CCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGATCTTAACCTTGACCTaGTCTGGCAGCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLILTLT*SGSCWR
Trigger: TCTCCAGCAGCTGCCAGACCAGGTCAAGGTTAAGAT...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAATGCGTTGGCGACTCTaGGACAACAACAACCCATCT +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTMRWRL*DNNNPS
Trigger: AGATGGGTTGTTGTTGTCCCAGAGTCGCCAACGCAT...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCAGGCAGACAATGCGTTaGCGACTCTGGGACAACAAC +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLRQTMR*RLWDNN
Trigger: GTTGTTGTCCCAGAGTCGCCAACGCATTGTCTGCCT...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CATGACAGTGGAGTGAGGATCAGAGGATCAGCCCCCTCCCGTTTCCTGGCACAGGGTGAACTAGACCCTTaGGTTTCCAGTGCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: HDSGVRIRGSAPSRFLAQGELDP*VSSASR
Trigger: CCTGCTAGCACTGGAAACCCAAGGGTCTAGTTCACC...CTGTGCCAGGAAACGGGAGGGGGCTGATCCTCTGATCCTCACTCCACTGTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTCTGATGGATGCTTTGTaGCCTGAGGTGCTGGTAATC +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPLMDAL*PEVLVI
Trigger: GATTACCAGCACCTCAGGCCACAAAGCATCCATCAG...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGCCCAAACATGCATATTaGGTGGGTGTGGCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLPKHAY*VGVAPA
Trigger: AGCGGGCGCCACACCCACCCAATATGCATGTTTGGG...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACAAAAGGGTATCTGACTaGGTGCTGGACAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHKRVSD*VLDRPR
Trigger: TCTGGGCCTGTCCAGCACCCAGTCAGATACCCTTTT...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCAGTCTCGGCACTGTAGAGTaGCCAGGACATGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: PFPGSCSLVASLALSLISLGTVE*PGHAGT
Trigger: TGTACCAGCATGTCCTGGCCACTCTACAGTGCCGAG...ACTGATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGTCTCAGGAAACACAGTaGCTCTTAGTAGGTCTCGGC +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWSQETQ*LLVGLG
Trigger: GCCGAGACCTACTAAGAGCCACTGTGTTTCCTGAGA...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGACATGCTCAGGACCATaGAAGGAGGCATCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGTCSGP*KEASAR
Trigger: TCTGGCAGATGCCTCCTTCCATGGTCCTGAGCATGT...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAGGGAAAAGGGCTGCCTaGATCAAGCTCTTGAACCTG +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQGKRAA*IKLLNL
Trigger: CAGGTTCAAGAGCTTGATCCAGGCAGCCCTTTTCCC...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTCTCAAACAGGTACCGTaGATAGTCCCTGATCCGAAC +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPLKQVP*IVPDPN
Trigger: GTTCGGATCAGGGACTATCCACGGTACCTGTTTGAG...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGAAGAGGTCCACACACTaGCCAATTAGTGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEKRSTH*PISVQA
Trigger: AGCCTGGACACTAATTGGCCAGTGTGTGGACCTCTT...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGAAGAGGTCCACACACTaGCCAATTAGTGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLKRSTH*PISVQA
Trigger: AGCCTGGACACTAATTGGCCAGTGTGTGGACCTCTT...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCGGTCAGCTGAGGGCTTaGTCAAGAGGTCCACACACT +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPGQLRA*SRGPHT
Trigger: AGTGTGTGGACCTCTTGACCAAGCCCTCAGCTGACC...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGAGCAGAATTCGGGGCTaGGATATTGTTCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLESRIRG*DIVPLC
Trigger: GCACAGTGGAACAATATCCCAGCCCCGAATTCTGCT...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCAGAATTCGGGGCTaGGATATTGTTCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWSRIRG*DIVPLC
Trigger: GCACAGTGGAACAATATCCCAGCCCCGAATTCTGCT...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACACAGCATTCTCTTCAGTaGGTGAGGCCATCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTQHSLQ*VRPSGE
Trigger: TTCACCTGATGGCCTCACCCACTGAAGAGAATGCTG...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTCAGCATTCTCTTCAGTaGGTGAGGCCATCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPQHSLQ*VRPSGE
Trigger: TTCACCTGATGGCCTCACCCACTGAAGAGAATGCTG...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAGACAAGCTCAGCAGGTaGGTCTTTGTTACCAAGGGA +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTDKLSR*VFVTKG
Trigger: TCCCTTGGTAACAAAGACCCACCTGCTGAGCTTGTC...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGCCCGCTTTGGCTTTTTaGCTGGCATCTGTGGATCAA +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLPALAF*LASVDQ
Trigger: TTGATCCACAGATGCCAGCCAAAAAGCCAAAGCGGG...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGCCATACCAGGCTGGATaGTGCTGGCACTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLPYQAG*CWHCSS
Trigger: ACTGCTGCAGTGCCAGCACCATCCAGCCTGGTATGG...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAGGCTGCTTTCAGTGGTaGCAAAGTACTGCATGCCAT +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTGCFQW*QSTACH
Trigger: ATGGCATGCAGTACTTTGCCACCACTGAAAGCAGCC...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGATCCGCTGGACTTGCTaGGCTTGCTGTGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEIRWTC*ACCASA
Trigger: AGCTGAGGCACAGCAAGCCCAGCAAGTCCAGCGGAT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCTAGAGATCTCAAGCTaGAACCTGACCCGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLELEISS*NLTRCF
Trigger: GAAGCAACGGGTCAGGTTCCAGCTTGAGATCTCTAG...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCCCGAGGCTTCACCACTaGTATTCCAGTAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLPRLHH*YSSSHQ
Trigger: CTGGTGACTACTGGAATACCAGTGGTGAAGCCTCGG...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAATGCGCCTGCCAAAGATaGACTTCTTGCCAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQCACQR*TSCQGS
Trigger: AGAACCCTGGCAAGAAGTCCATCTTTGGCAGGCGCA...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACTGCGCCTGCCAAAGATaGACTTCTTGCCAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHCACQR*TSCQGS
Trigger: AGAACCCTGGCAAGAAGTCCATCTTTGGCAGGCGCA...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGGACTGGCAGGAGCTCTaGGGCCGCAGTACTACCTTA +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEDWQEL*GRSTTL
Trigger: TAAGGTAGTACTGCGGCCCCAGAGCTCCTGCCAGTC...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCCAGGTGTCCTCCAGCTaGCCACTCTTTAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLQVSSS*PLFRTL
Trigger: CAAAGTTCTAAAGAGTGGTCAGCTGGAGGACACCTG...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAGTTTTCTGTCACCTCTaGACAGGGAACAGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTVFCHL*TGNRLR
Trigger: TCTAAGCCTGTTCCCTGTTCAGAGGTGACAGAAAAC...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CTGATCCTCATCACGGTGGTACAGGAACTGCAGCAGCTTCAGAGTCCAAGTCAGCTTCGAAGGGGCAGCTaGTCCTCATCACGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: LILITVVQELQQLQSPSQLRRGS*SSSRWY
Trigger: GTACCACCGTGATGAGGATCAGCTGCCCCTTCGAAG...CTGACTTGGACTCTGAAGCTGCTGCAGTTCCTGTACCACCGTGATGAGGATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581267.1
ENST00000583403.5
CDS-3UTR TCA 90 bp TTTAGAACAGGTGAACTAGACCCTTGGGTTTCCAGTGCTAGCAGGTGCAGCCAGAGCAGGTGCAGCCAGTaGGAGAATTCCTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: FRTGELDPWVSSASRCSQSRCSQ*ENSWCR
Trigger: CCGGCACCAGGAATTCTCTCACTGGCTGCACCTGCT...CTGGCTGCACCTGCTAGCACTGGAAACCCAAGGGTCTAGTTCACCTGTTCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581267.1
CDS-3UTR TCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGGATGCTTTGTGGCCTaGGGTGCTGGTAATCCAGAG +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLGCFVA*GAGNPE
Trigger: CTCTGGATTACCAGCACCTCAGGCCACAAAGCATCC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTCTGATGCTTCCACCTaGAGTCCTCGAATGGTACAA +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLESDAST*SPRMVQ
Trigger: TTGTACCATTCGAGGACTTCAGGTGGAAGCATCAGA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTTGGGCACAGGTATCTaGTGCTTCCACCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPLGTGI*CFHLKS
Trigger: GGACTTCAGGTGGAAGCATCAGATACCTGTGCCCAA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCCACAGATTCCCCAAATaGAGAGTGCCTAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLHRFPK*RVPRDS
Trigger: GCTGTCTCTAGGCACTCTTCATTTGGGGAATCTGTG...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCACAGATTCCCCAAATaGAGAGTGCCTAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHHRFPK*RVPRDS
Trigger: GCTGTCTCTAGGCACTCTTCATTTGGGGAATCTGTG...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCGTCCAGTCGTACCTCTaGAGCACCAACCAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCVQSYL*STNQGR
Trigger: TCTGCCTTGGTTGGTGCTTCAGAGGTACGACTGGAC...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTGCTGCTGTGATAGGTaGTGGAGAGCATGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPCCCDR*WRAWKG
Trigger: GCCTTTCCATGCTCTCCATCACCTATCACAGCAGCA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGAAACTCCACCGAGACTaGGCCGAAAGAGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEKLHRD*AEREEP
Trigger: TGGCTCCTCTCTTTCGGCTCAGTCTCGGTGGAGTTT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGCAAGCACGAGTCCCTTaGTGTAGTCCCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLQARVP*CSPFSH
Trigger: GTGGCTGAAGGGACTACATCAAGGGACTCGTGCTTG...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCCTGGATCAAGCTCTTaGACCTGTTCTACCACATGC +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGPGSSS*TCSTTC
Trigger: GCATGTGGTAGAACAGGTTCAAGAGCTTGATCCAGG...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAACCGTGGATAGTCCCTaGTCCGAACCAGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLETVDSP*SEPESS
Trigger: AGAGCTTTCTGGTTCGGATCAGGGACTATCCACGGT...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCAGTCATGGTAGAATTTaGGTGGGGGCATGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPSHGRI*VGACSS
Trigger: AGAGGAACATGCCCCCACTCAAATTCTACCATGACT...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAGTGAAGACATGGCCCTaGCTGCACTCAATCTGGATG +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEVKTWP*LHSIWM
Trigger: CATCCAGATTGAGTGCAGTCAGGGCCATGTCTTCAC...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCATTCTCTTCAGTGGGTaGGGCCATCAGGTGAACGGT +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPILFSG*GHQVNG
Trigger: ACCGTTCACCTGATGGCCTCACCCACTGAAGAGAAT...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTATGCCGTTGGTAGGTaGGGGAGGACAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCYAVGR*GRTSSA
Trigger: TGCTGAGCTTGTCCTCCCTCACCTACCAACGGCATA...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATTATGCCGTTGGTAGGTaGGGGAGGACAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNYAVGR*GRTSSA
Trigger: TGCTGAGCTTGTCCTCCCTCACCTACCAACGGCATA...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCTGGTCACTCATGCCTaGTTCCTCTTCTGTGAACAC +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHLVTHA*FLFCEH
Trigger: GTGTTCACAGAAGAGGAATCAGGCATGAGTGACCAG...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGAGTTGCAACGCGAAATaGTCCGCTGGACTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEESCNAK*SAGLAG
Trigger: CCCAGCAAGTCCAGCGGATCATTTCGCGTTGCAACT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACATGGTTTAGCTGCAACTaGAGCTTCTGGTTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTWFSCN*SFWFRS
Trigger: TGACCTGAACCAGAAGCTTCAGTTGCAGCTAAACCA...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGTGGTTTAGCTGCAACTaGAGCTTCTGGTTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLWFSCN*SFWFRS
Trigger: TGACCTGAACCAGAAGCTTCAGTTGCAGCTAAACCA...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTGCGAAATGACCTTCTaGCCCCAGAACTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPCEMTF*PQNSES
Trigger: TGACTCGGAGTTCTGGGGTCAGAAGGTCATTTCGCA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCTCACCCTTGTAGCTaGCACACAGTGGAACCTGTG +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLESHPCS*HTVEPV
Trigger: CACAGGTTCCACTGTGTGTCAGCTACAAGGGTGAGA...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCAGTGCCTTAGCTTCTCTTTaGTTACCTGGGCAACCAGGG +
Preference number: 4 (lower is better)
Translates to: PFPGSCSLVASLALSLISALASL*LPGQPG
Trigger: CCCTGGTTGCCCAGGTAATCAAAGAGAAGCTAAGGC...ACTGATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR TCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAACCACACTTAAACCAATaGGGAGCCGGGCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEPHLNQ*GAGLSP
Trigger: AGGAGAAAGCCCGGCTCCTCATTGGTTTAAGTGTGG...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTGCCATATCAGAGTTTaGTGTGAAGCTTCGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLECHIRV*CEASKG
Trigger: CCCCTTCGAAGCTTCACAGCAAACTCTGATATGGCA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCAGCAGCAGTTCAGTaGTCATCTGTGCCATATCAG +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHPAAVQ*SSVPYQ
Trigger: CTGATATGGCACAGATGAGCACTGAACTGCTGCTGG...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GCTTCGAAGGGGCAGCTGATCCTCATCACGGTGGTACAGGAACTGCAGCAGCTTTCAATGGTGGTCACCTaGACACTAGCCTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ASKGQLILITVVQELQQLSMVVT*TLALRE
Trigger: CTCCCTCAAGGCTAGTGTGCAGGTGACCACCATTGA...AAGCTGCTGCAGTTCCTGTACCACCGTGATGAGGATCAGCTGCCCCTTCGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581267.1
CDS-3UTR GCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACGGAGTCCAGAACAAGTaGCTCACCCCAAACATGCAT +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHGVQNK*LTPNMH
Trigger: ATGCATGTTTGGGGTGAGGCACTTGTTCTGGACTCC...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCCAGCTCTGGACAGTATaGCTGCAGGGAACCTCCATG +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAQLWTV*LQGTSM
Trigger: CATGGAGGTTCCCTGCAGGCATACTGTCCAGAGCTG...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTCAGCTCTGGACAGTATaGCTGCAGGGAACCTCCATG +
Preference number: 4 (lower is better)
Translates to: DRTQHYCPPCPAANRPGAQLWTV*LQGTSM
Trigger: CATGGAGGTTCCCTGCAGGCATACTGTCCAGAGCTG...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCAGCTCAGGTAGCAGCTaGACCTCCACCTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDASSGSS*TSTSLK
Trigger: CTTCAAGGAGGTGGAGGTGCAGCTGCTACCTGAGCT...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAACCTGTTCTACCACATaGTCAGGACCATGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQTCSTT*SGPWKE
Trigger: CTCCTTCCATGGTCCTGAGCATGTGGTAGAACAGGT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCAGTCAGGGGGAAAAGGGCTaGCTGGATCAAGCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: PFPGSCSLVASLALSLISQGEKG*LDQALE
Trigger: TTCAAGAGCTTGATCCAGGCAGCCCTTTTCCCCCTG...ACTGATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGCATGTTCCTCTCCACTaGCACGTTACCCCACGGAAG +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLHVPLH*HVTPRK
Trigger: CTTCCGTGGGGTAACGTGGCAGTGGAGAGGAACATG...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTTCAGTGGCCAGCTGGTaGAGGTTCGCCTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: DRTQHYCPPCPAANRPGASVASW*RFACSM
Trigger: CATTGAACAGGCGAACCTGCACCAGCTGGCCACTGA...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATGCACTCAATCTGGATaGCCCGTTGCTGGGCAAATG +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLECTQSG*PVAGQM
Trigger: CATTTGCCCAGCAACGGGGCATCCAGATTGAGTGCA...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAGACATGGCCCTGACTaGACTCAATCTGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLRHGPD*TQSGCP
Trigger: GGGGCATCCAGATTGAGTGCAGTCAGGGCCATGTCT...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCAGACATGGCCCTGACTaGACTCAATCTGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDARHGPD*TQSGCP
Trigger: GGGGCATCCAGATTGAGTGCAGTCAGGGCCATGTCT...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCACAGCCTTCTGTCTCTaGTCCACGAAGAACCATCTG +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLTAFCL*STKNHL
Trigger: CAGATGGTTCTTCGTGGAGCAGAGACAGAAGGCTGT...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGACAGCCTTCTGTCTCTaGTCCACGAAGAACCATCTG +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGTAFCL*STKNHL
Trigger: CAGATGGTTCTTCGTGGAGCAGAGACAGAAGGCTGT...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CTTGATCAGGACTATCCCCCTACCCTTTCACTTGACCCCAAGGGAATAGGGTCCGGATGGTGCTGGCACTaGAGCAGTTGGGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LDQDYPPTLSLDPKGIGSGWCWH*SSWALA
Trigger: TGCCAAAGCCCAACTGCTGCAGTGCCAGCACCATCC...GGACCCTATTCCCTTGGGGTCAAGTGAAAGGGTAGGGGGATAGTCCTGATCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGTGGCAAAGTACTGCATaGCATCCAAGAGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGWQSTA*HPRGKS
Trigger: GGACTTGCCTCTTGGATGGCATGCAGTACTTTGCCA...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCTGGCAAAGTACTGCATaGCATCCAAGAGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLWQSTA*HPRGKS
Trigger: GGACTTGCCTCTTGGATGGCATGCAGTACTTTGCCA...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGCCTGCTCTGTGGGGCTaGTTTCAGTGGTGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLPALWG*FQWWQS
Trigger: ACTTTGCCACCACTGAAAGCAGCCCCACAGAGCAGG...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCATGATCCGCTGGACTTaGTGGGCTTGCTGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAMIRWT*WACCAS
Trigger: TGAGGCACAGCAAGCCCAGCAAGTCCAGCGGATCAT...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGATGATCCGCTGGACTTaGTGGGCTTGCTGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVMIRWT*WACCAS
Trigger: TGAGGCACAGCAAGCCCAGCAAGTCCAGCGGATCAT...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAACCTGACCCGTTaGTTCTTCTCACTATGTTCC +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPWNLTR*FFSLCS
Trigger: GGAACATAGTGAGAAGAAGCAACGGGTCAGGTTCCA...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGTGGAACCTGACCCGTTaGTTCTTCTCACTATGTTCC +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLWNLTR*FFSLCS
Trigger: GGAACATAGTGAGAAGAAGCAACGGGTCAGGTTCCA...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCAATGCAGTATGCTGCTaGGTTGCTCCTCTGGATTGC +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLNAVCC*VAPLDC
Trigger: GCAATCCAGAGGAGCAACGCAGCAGCATACTGCATT...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAACCTGCAAATGCAGTATaGTGCTGCGTTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEPANAV*CCVAPL
Trigger: CAGAGGAGCAACGCAGCAGCATACTGCATTTGCAGG...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGATTTGGGCCACATGCTaGCGCACAGCCTCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEIWATC*RTASCK
Trigger: TTTGCAGGAGGCTGTGCGGCAGCATGTGGCCCAAAT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGATTTGGGCCACATGCTaGCGCACAGCCTCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVIWATC*RTASCK
Trigger: TTTGCAGGAGGCTGTGCGGCAGCATGTGGCCCAAAT...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCCTCACATCTTCTTGCTaGTTTCGCAGCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPLTSSC*FRSSIL
Trigger: CAAGATGGAGCTGCGAAAGCAGCAAGAAGATGTGAG...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAACACTCACATCTTCTTaGTGCTTTCGCAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTTLTSS*CFRSSI
Trigger: GATGGAGCTGCGAAAGCAGCAAGAAGATGTGAGTGT...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCTGTTGCAATCAGCTaGCGAGGCTTCACCACTGGT +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPSVAIS*RGFTTG
Trigger: ACCAGTGGTGAAGCCTCGGCAGCTGATTGCAACAGA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTACTGCATCATCTGTTaGAATCAGCTGCCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEYCIIC*NQLPRL
Trigger: AAGCCTCGGCAGCTGATTGCAACAGATGATGCAGTA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAAGTCAGATCCTGTACTaGAGCCACTCGAATCGCCAA +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQSQILY*SHSNRQ
Trigger: TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGAGCGCTCTGGGAGAATaGGGCAGACAGGTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEESALGE*GRQVRN
Trigger: GTTTCTGACCTGTCTGCCCCATTCTCCCAGAGCGCT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCACAGCAGTTGGCTCTaGAAGAGGCCCTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNHSSWL*KRPSCS
Trigger: ACTGCATGAGGGCCTCTTCCAGAGCCAACTGCTGTG...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAAACATGCATATTGGGTaGGTGTGGCGCCCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLENMHIG*VWRPLN
Trigger: ATTCAGCGGGCGCCACACCCACCCAATATGCATGTT...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCAAAAGGGTATCTGACTaGGTGCTGGACAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPKRVSD*VLDRPR
Trigger: TCTGGGCCTGTCCAGCACCCAGTCAGATACCCTTTT...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGCTTGAATCCCCACAGTaGACGTCTCTGCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEELESPQ*TSLHCP
Trigger: TGGGCAGTGCAGAGACGTCCACTGTGGGGATTCAAG...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTTGAATCCCCACAGTaGACGTCTCTGCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVLESPQ*TSLHCP
Trigger: TGGGCAGTGCAGAGACGTCCACTGTGGGGATTCAAG...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAACTCAAACAGGTACCGTaGATAGTCCCTGATCCGAAC +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQLKQVP*IVPDPN
Trigger: GTTCGGATCAGGGACTATCCACGGTACCTGTTTGAG...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCCTCAAACAGGTACCGTaGATAGTCCCTGATCCGAAC +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLLKQVP*IVPDPN
Trigger: GTTCGGATCAGGGACTATCCACGGTACCTGTTTGAG...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCATGGTAGAATTTGAGTaGGGGCATGTTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPMVEFE*GHVPLH
Trigger: GTGGAGAGGAACATGCCCCCACTCAAATTCTACCAT...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGATGGTAGAATTTGAGTaGGGGCATGTTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWMVEFE*GHVPLH
Trigger: GTGGAGAGGAACATGCCCCCACTCAAATTCTACCAT...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGTGTATGGATCCTCAGTaGCCAGCTGGTGCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLCMDPQ*PAGAGS
Trigger: CGAACCTGCACCAGCTGGCCACTGAGGATCCATACA...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCAGCAGAATTCGGGGCTaGGATATTGTTCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLSRIRG*DIVPLC
Trigger: GCACAGTGGAACAATATCCCAGCCCCGAATTCTGCT...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAACAGCATTCTCTTCAGTaGGTGAGGCCATCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQQHSLQ*VRPSGE
Trigger: TTCACCTGATGGCCTCACCCACTGAAGAGAATGCTG...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCCCCGCTTTGGCTTTTTaGCTGGCATCTGTGGATCAA +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLPALAF*LASVDQ
Trigger: TTGATCCACAGATGCCAGCCAAAAAGCCAAAGCGGG...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATTGGGACACCCCGCTTTaGCTTTTTGGCTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNWDTPL*LFGWHL
Trigger: CAGATGCCAGCCAAAAAGCCAAAGCGGGGTGTCCCA...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGTATATGTCATCCGTCTaGCAGGCAGCAATGCCACAC +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGYMSSV*QAAMPH
Trigger: GTGTGGCATTGCTGCCTGCCAGACGGATGACATATA...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGTGGCACTGCAGCAGTTaGGCTTTGGCAGCTGACACA +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLWHCSS*ALAADT
Trigger: TGTGTCAGCTGCCAAAGCCCAACTGCTGCAGTGCCA...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTTGGCACTGCAGCAGTTaGGCTTTGGCAGCTGACACA +
Preference number: 4 (lower is better)
Translates to: DRTQHYCPPCPAANRPGAWHCSS*ALAADT
Trigger: TGTGTCAGCTGCCAAAGCCCAACTGCTGCAGTGCCA...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATGTGCCTCAGCTGGCTaGTTCCAATCTGTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLECASAG*FQSVVV
Trigger: CACAACCACAGATTGGAACCAGCCAGCTGAGGCACA...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTGTGCCTCAGCTGGCTaGTTCCAATCTGTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPCASAG*FQSVVV
Trigger: CACAACCACAGATTGGAACCAGCCAGCTGAGGCACA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCCGCGAAATGATCCGCTaGACTTGCTGGGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCREMIR*TCWACC
Trigger: ACAGCAAGCCCAGCAAGTCCAGCGGATCATTTCGCG...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCAATGTCCAGGATCATaGCATACTGAGCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGQCPGS*HTELGW
Trigger: CCAACCCAGCTCAGTATGCCATGATCCTGGACATTG...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCCGCTTAGGTTCTACATaGAGCAGCAGGTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPRLGST*SSRLLT
Trigger: TGTCAACAACCTGCTGCTCCATGTAGAACCTAAGCG...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGCGCTTAGGTTCTACATaGAGCAGCAGGTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWRLGST*SSRLLT
Trigger: TGTCAACAACCTGCTGCTCCATGTAGAACCTAAGCG...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCTAGAGATCTCAAGCTaGAACCTGACCCGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHLEISS*NLTRCF
Trigger: GAAGCAACGGGTCAGGTTCCAGCTTGAGATCTCTAG...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAGCTGCGTTGCTCCTCTaGATTGCTAGAGATCTCAAG +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQAALLL*IARDLK
Trigger: CTTGAGATCTCTAGCAATCCAGAGGAGCAACGCAGC...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTCCAGCTGTCGTATTTaGGCCACATGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCSSCRI*ATCCRT
Trigger: TGTGCGGCAGCATGTGGCCCAAATACGACAGCTGGA...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTCCAGCTGTCGTATTTaGGCCACATGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDASSCRI*ATCCRT
Trigger: TGTGCGGCAGCATGTGGCCCAAATACGACAGCTGGA...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGAAGCCCATCATTCTGTaGAAGAACTGGTGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEKPIIL*KNWCVS
Trigger: GCTGACACACCAGTTCTTCCACAGAATGATGGGCTT...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGCTTCCCAGGGCCCAGTaGTACTGCATCATCTGTTGC +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLLPRAQ*YCIICC
Trigger: GCAACAGATGATGCAGTACCACTGGGCCCTGGGAAG...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGTTCTCTTTGATTACCTaGGCAACCAGGGCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGFSLIT*ATRALR
Trigger: CCGCAAAGCCCTGGTTGCCCAGGTAATCAAAGAGAA...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGACCCACAAATCCTCGTaGATAACGGGAAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLTHKSS*ITGSPS
Trigger: GGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
3UTR CAA 72 bp TCAATGGTGGTCACCTGCACACTAGCCTTGAGGGAGTaGAGGCAGACAATGCGTTGGCGACTCTGGGACAAC +
Preference number: 4 (lower is better)
Translates to: SMVVTCTLALRE*RQTMRWRLWDN
Trigger: GTTGTCCCAGAGTCGCCAACGCATTGTCTGCCTCAACTCCCTCAAGGCTAGTGTGCAGGTGACCACCATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581267.1
CDS-3UTR TCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCTGTAGGTCCGTTCTaGTACGCACTTCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPSVGPF*YALLQS
Trigger: GCTTTGGAGAAGTGCGTATCAGAACGGACCTACAGA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATATCAGAGTTTGCTGTaGAGCTTCGAAGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEYQSLL*SFEGAA
Trigger: AGCTGCCCCTTCGAAGCTTCACAGCAAACTCTGATA...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp TCGCTCAGTACCAGTACCCCGACCCATGAACCTTCCAGCAGCAGTTCAGTGCTCTATCAGAGTTTGCTGTaGAGCTTCGAAGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLSTSTPTHEPSSSSSVLYQSLL*SFEGAA
Trigger: AGCTGCCCCTTCGAAGCTTCACAGCAAACTCTGATA...GAGCACTGAACTGCTGCTGGAAGGTTCATGGGTCGGGGTACTGGTACTGAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR TCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGTTGGGCACAGGTATCTaGTGCTTCCACCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLLGTGI*CFHLKS
Trigger: GGACTTCAGGTGGAAGCATCAGATACCTGTGCCCAA...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCGCTAACACAAGTCCTTaGATCCCCACAGTGGACGTC +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAANTSP*IPTVDV
Trigger: GACGTCCACTGTGGGGATTCAAGGACTTGTGTTAGC...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCCCTGGATCAAGCTCTTaGACCTGTTCTACCACATGC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPPGSSS*TCSTTC
Trigger: GCATGTGGTAGAACAGGTTCAAGAGCTTGATCCAGG...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTTCGACACCACTGAATaGCAAGATCTAATCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEFDTTE*QDLIPQ
Trigger: CTGAGGGATTAGATCTTGTCATTCAGTGGTGTCGAA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTAGCATTCGACACCACTaGATGACAAGATCTAATCCC +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPSIRHH*MTRSNP
Trigger: GGGATTAGATCTTGTCATTCAGTGGTGTCGAATGCT...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCACCGTGGATAGTCCCTaGTCCGAACCAGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDATVDSP*SEPESS
Trigger: AGAGCTTTCTGGTTCGGATCAGGGACTATCCACGGT...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGAGTCATGGTAGAATTTaGGTGGGGGCATGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGSHGRI*VGACSS
Trigger: AGAGGAACATGCCCCCACTCAAATTCTACCATGACT...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGTGGGTTTCAGGTTATTaGAGAGCTTTCCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGWVSGY*RAFPCR
Trigger: TCTGCAGGGGAAAGCTCTTCAATAACCTGAAACCCA...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCGTGAAGACATGGCCCTaGCTGCACTCAATCTGGATG +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAVKTWP*LHSIWM
Trigger: CATCCAGATTGAGTGCAGTCAGGGCCATGTCTTCAC...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGTGAAGACATGGCCCTaGCTGCACTCAATCTGGATG +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLVKTWP*LHSIWM
Trigger: CATCCAGATTGAGTGCAGTCAGGGCCATGTCTTCAC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGATTCTCTTCAGTGGGTaGGGCCATCAGGTGAACGGT +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVILFSG*GHQVNG
Trigger: ACCGTTCACCTGATGGCCTCACCCACTGAAGAGAAT...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGAAGGGATCAAGACAGTaGTCAGCATTCTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEKGSRQ*SAFSSV
Trigger: CACTGAAGAGAATGCTGATCACTGTCTTGATCCCTT...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAAGGGATCAAGACAGTaGTCAGCATTCTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWKGSRQ*SAFSSV
Trigger: CACTGAAGAGAATGCTGATCACTGTCTTGATCCCTT...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCAAGGGATCAAGACAGTaGTCAGCATTCTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPKGSRQ*SAFSSV
Trigger: CACTGAAGAGAATGCTGATCACTGTCTTGATCCCTT...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAACTGGTCACTCATGCCTaGTTCCTCTTCTGTGAACAC +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLELVTHA*FLFCEH
Trigger: GTGTTCACAGAAGAGGAATCAGGCATGAGTGACCAG...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGTGGCAGCTGACACAATaGCACAGCCTTCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLWQLTQ*HSLLSL
Trigger: CAGAGACAGAAGGCTGTGTCATTGTGTCAGCTGCCA...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTTGGGCTTTGGCAGCTaGCACAATGACACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEELGFGS*HNDTAF
Trigger: GAAGGCTGTGTCATTGTGTCAGCTGCCAAAGCCCAA...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTTCAGGTGGCTTAATCTaGGTTGCTAGTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPSGGLI*VASSGS
Trigger: TGATCCTGAACTAGCAACTCAGATTAAGCCACCTGA...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACAGGATCATGGCATACTaGGCTGGGTTGGTGGAAATT +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHRIMAY*AGLVEI
Trigger: AATTTCCACCAACCCAGCTCAGTATGCCATGATCCT...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTCTCAAGCTGGAACCTaGCCCGTTGCTTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCSQAGT*PVASSH
Trigger: GTGAGAAGAAGCAACGGGTCAGGTTCCAGCTTGAGA...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGTGGTTTAGCTGCAACTaGAGCTTCTGGTTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGWFSCN*SFWFRS
Trigger: TGACCTGAACCAGAAGCTTCAGTTGCAGCTAAACCA...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGTGTCAGCTGGATGGTaGGAGGCACCACATTTACCT +
Preference number: 4 (lower is better)
Translates to: DRTQHYCPPCPAANRPGAVSAGW*EAPHLP
Trigger: AGGTAAATGTGGTGCCTCTCACCATCCAGCTGACAC...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTGGCGATTTGCGAAATaGCCTTCTGACCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPWRFAK*PSDPRT
Trigger: AGTTCTGGGGTCAGAAGGTCATTTCGCAAATCGCCA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGGTGATAGCAGTGAGATaGCGACTGCTAATGCCCACC +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVVIAVR*RLLMPT
Trigger: GGTGGGCATTAGCAGTCGGCATCTCACTGCTATCAC...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CTAATGCCCACCTTTAGACACAGGTCCAGGGCCAGTGAAAGCTCCACTAGGCAGGTGATAGCAGTGAGATaGCGACTGCTAATGCCCACC +
Preference number: 4 (lower is better)
Translates to: LMPTFRHRSRASESSTRQVIAVR*RLLMPT
Trigger: GGTGGGCATTAGCAGTCGGCATCTCACTGCTATCAC...CTGCCTAGTGGAGCTTTCACTGGCCCTGGACCTGTGTCTAAAGGTGGGCATTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR GCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAACCAGCAGCAGTTCAGTaGTCATCTGTGCCATATCAG +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEPAAVQ*SSVPYQ
Trigger: CTGATATGGCACAGATGAGCACTGAACTGCTGCTGG...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGTCAATGGTGGTCACCTaGACACTAGCCTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVSMVVT*TLALRE
Trigger: CTCCCTCAAGGCTAGTGTGCAGGTGACCACCATTGA...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCAGGGGGAAAAGGGCTaGCTGGATCAAGCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNQGEKG*LDQALE
Trigger: TTCAAGAGCTTGATCCAGGCAGCCCTTTTCCCCCTG...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CTTGATCAGGACTATCCCCCTACCCTTTCACTTGACCCCAAGGGAATAGGGTCCGACCACTCTGCTCGGTaGCCACAAGTCGACCCATTA +
Preference number: 4 (lower is better)
Translates to: LDQDYPPTLSLDPKGIGSDHSAR*PQVDPL
Trigger: TAATGGGTCGACTTGTGGGCACCGAGCAGAGTGGTC...GGACCCTATTCCCTTGGGGTCAAGTGAAAGGGTAGGGGGATAGTCCTGATCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTGTTCAATGTCCATGTaGCAGTCTCCATGGAACAGA +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLECSMSM*QSPWNR
Trigger: TCTGTTCCATGGAGACTGGCACATGGACATTGAACA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGTTCAATGTCCATGTaGCAGTCTCCATGGAACAGA +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPCSMSM*QSPWNR
Trigger: TCTGTTCCATGGAGACTGGCACATGGACATTGAACA...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACATGTTCAATGTCCATGTaGCAGTCTCCATGGAACAGA +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTCSMSM*QSPWNR
Trigger: TCTGTTCCATGGAGACTGGCACATGGACATTGAACA...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGTGGCTCCACTCCCAGTaGATATTTTCAGTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLWLHSQ*IFSVVL
Trigger: CAACACAACTGAAAATATGCACTGGGAGTGGAGCCA...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATTGGCTCCACTCCCAGTaGATATTTTCAGTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: GPIPWVLLSCCLSGPEPDWLHSQ*IFSVVL
Trigger: CAACACAACTGAAAATATGCACTGGGAGTGGAGCCA...ATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGGATATTGTTCCACTGTaGCGAGTCAGATCCATCTTG +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWDIVPL*RVRSIL
Trigger: CAAGATGGATCTGACTCGGCACAGTGGAACAATATC...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAGTTGCCCAGAAGTTTTaGATCCAGCGCAGGGTACTA +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEVAQKF*IQRRVL
Trigger: TAGTACCCTGCGCTGGATGCAAAACTTCTGGGCAAC...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAGACACTTGTCCAAGTTaGCCAGAAGTTTTGCATCCA +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTDTCPS*PEVLHP
Trigger: TGGATGCAAAACTTCTGGGCAACTTGGACAAGTGTC...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CTTGATCAGGACTATCCCCCTACCCTTTCACTTGACCCCAAGGGAATAGGGTCCATCTGGATGCCCCGTTaGTGGGCAAATGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: LDQDYPPTLSLDPKGIGSIWMPR*WANEAQ
Trigger: TTGGGCCTCATTTGCCCAGCAACGGGGCATCCAGAT...GGACCCTATTCCCTTGGGGTCAAGTGAAAGGGTAGGGGGATAGTCCTGATCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAGACTACGCTGCCGGTaGTCCTCGATATTCTTCACC +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLRLRCR*SSIFFT
Trigger: GGTGAAGAATATCGAGGAGCACCGGCAGCGTAGTCT...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGAGACTACGCTGCCGGTaGTCCTCGATATTCTTCACC +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEERLRCR*SSIFFT
Trigger: GGTGAAGAATATCGAGGAGCACCGGCAGCGTAGTCT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATAGACTACGCTGCCGGTaGTCCTCGATATTCTTCACC +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNRLRCR*SSIFFT
Trigger: GGTGAAGAATATCGAGGAGCACCGGCAGCGTAGTCT...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCACAGCCCCTTCCTaGTTCTTTAGGAGATCTTCC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPSTAPS*FFRRSS
Trigger: GGAAGATCTCCTAAAGAAGCAGGAAGGGGCTGTGGA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCAGTATGCTGCTGCGTTaGTCCTCTGGATTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPSMLLR*SSGLLE
Trigger: CTCTAGCAATCCAGAGGAGCAACGCAGCAGCATACT...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGCCTGCAAATGCAGTATaGTGCTGCGTTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEPANAV*CCVAPL
Trigger: CAGAGGAGCAACGCAGCAGCATACTGCATTTGCAGG...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCCCTGCAAATGCAGTATaGTGCTGCGTTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCPANAV*CCVAPL
Trigger: CAGAGGAGCAACGCAGCAGCATACTGCATTTGCAGG...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCACAGCCTCCTGCAAATaGAGTATGCTGCTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCTASCK*SMLLRC
Trigger: GCAACGCAGCAGCATACTGCATTTGCAGGAGGCTGT...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATTCTTCACTTTCCAGCTaGAGGTTGGCCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNSSLSS*RLAFSW
Trigger: CCAGGAGAAGGCCAACCTGCAGCTGGAAAGTGAAGA...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTCCTGCCCTGGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCATCTTGTTAGCCCGCTaGAGTTGGAAATCCTTAAAA +
Preference number: 4 (lower is better)
Translates to: VLPWAHSLGLALLLPLWPILLAR*SWKSLK
Trigger: TTTTAAGGATTTCCAACTGCAGCGGGCTAACAAGAT...GGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCCAGGGCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAACTCACATCTTCTTGCTaGTTTCGCAGCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQLTSSC*FRSSIL
Trigger: CAAGATGGAGCTGCGAAAGCAGCAAGAAGATGTGAG...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCACACTCACATCTTCTTaGTGCTTTCGCAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLTLTSS*CFRSSI
Trigger: GATGGAGCTGCGAAAGCAGCAAGAAGATGTGAGTGT...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGACACTCACATCTTCTTaGTGCTTTCGCAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGTLTSS*CFRSSI
Trigger: GATGGAGCTGCGAAAGCAGCAAGAAGATGTGAGTGT...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACACAAAGTAAAACTCAGTaGGACGGACCACACTCACAT +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTQSKTQ*DGPHSH
Trigger: ATGTGAGTGTGGTCCGTCGCACTGAGTTTTACTTTG...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACACAGACTTATTCACCTTaGTGTAGAGGAACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTQTYSP*CRGTSA
Trigger: TGCAGAGGTTCCTCTACAGCAAGGTGAATAAGTCTG...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTCAGACTTATTCACCTTaGTGTAGAGGAACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPQTYSP*CRGTSA
Trigger: TGCAGAGGTTCCTCTACAGCAAGGTGAATAAGTCTG...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTCTGTTGCAATCAGCTaGCGAGGCTTCACCACTGGT +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEESVAIS*RGFTTG
Trigger: ACCAGTGGTGAAGCCTCGGCAGCTGATTGCAACAGA...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCTACTGCATCATCTGTTaGAATCAGCTGCCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLYCIIC*NQLPRL
Trigger: AAGCCTCGGCAGCTGATTGCAACAGATGATGCAGTA...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCAGGGCCCAGTGGTACTaGATCATCTGTTGCAATCAG +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPRAQWY*IICCNQ
Trigger: CTGATTGCAACAGATGATGCAGTACCACTGGGCCCT...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCCAAAGATGGACTTCTTaGCAGGGTTCTTGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPQRWTS*QGSCRP
Trigger: TGGGCGACAAGAACCCTGGCAAGAAGTCCATCTTTG...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCCATTACTGTCCACCATaGCCTGCAGCGAACAGACCA +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAHYCPP*PAANRP
Trigger: TGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATG...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGCATTACTGTCCACCATaGCCTGCAGCGAACAGACCA +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEHYCPP*PAANRP
Trigger: TGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATG...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGCAATGCCACATAGTGTaGAAGATCATGGCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWQCHIV*KIMAKE
Trigger: CTCCTTAGCCATGATCTTCCACACTATGTGGCATTG...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp AGTGTCCACACATCCACAGTGATAGCAGTGAGATGCCGACTGCTAATGCCCACCAGCGCTCTGGGAGAATaGGGCAGACAGGTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SVHTSTVIAVRCRLLMPTSALGE*GRQVRN
Trigger: GTTTCTGACCTGTCTGCCCCATTCTCCCAGAGCGCT...GGTGGGCATTAGCAGTCGGCATCTCACTGCTATCACTGTGGATGTGTGGACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR CCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCATCTTAACCTTGACCTaGTCTGGCAGCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPILTLT*SGSCWR
Trigger: TCTCCAGCAGCTGCCAGACCAGGTCAAGGTTAAGAT...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGAGGCAGACAATGCGTTaGCGACTCTGGGACAACAAC +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVRQTMR*RLWDNN
Trigger: GTTGTTGTCCCAGAGTCGCCAACGCATTGTCTGCCT...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CTCATCACGGTGGTACAGGAACTGCAGCAGCTTCAGAGTCCAAGTCAGGTGCCTAGGCAGACAATGCGTTaGCGACTCTGGGACAACAAC +
Preference number: 4 (lower is better)
Translates to: LITVVQELQQLQSPSQVPRQTMR*RLWDNN
Trigger: GTTGTTGTCCCAGAGTCGCCAACGCATTGTCTGCCT...AGGCACCTGACTTGGACTCTGAAGCTGCTGCAGTTCCTGTACCACCGTGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581267.1
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGAACATGCATATTGGGTaGGTGTGGCGCCCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEENMHIG*VWRPLN
Trigger: ATTCAGCGGGCGCCACACCCACCCAATATGCATGTT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATAACATGCATATTGGGTaGGTGTGGCGCCCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNNMHIG*VWRPLN
Trigger: ATTCAGCGGGCGCCACACCCACCCAATATGCATGTT...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGATACGAGACAGACATTaGGCACAGGTATCTGATGCT +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLIRDRH*AQVSDA
Trigger: AGCATCAGATACCTGTGCCCAATGTCTGTCTCGTAT...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGATACGAGACAGACATTaGGCACAGGTATCTGATGCT +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEIRDRH*AQVSDA
Trigger: AGCATCAGATACCTGTGCCCAATGTCTGTCTCGTAT...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCACATGCTCAGGACCATaGAAGGAGGCATCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCTCSGP*KEASAR
Trigger: TCTGGCAGATGCCTCCTTCCATGGTCCTGAGCATGT...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAATGGTAGAATTTGAGTaGGGGCATGTTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQMVEFE*GHVPLH
Trigger: GTGGAGAGGAACATGCCCCCACTCAAATTCTACCAT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCAGTAAGAGGTCCACACACTaGCCAATTAGTGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PFPGSCSLVASLALSLISKRSTH*PISVQA
Trigger: AGCCTGGACACTAATTGGCCAGTGTGTGGACCTCTT...ACTGATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTATATGTCATCCGTCTaGCAGGCAGCAATGCCACAC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPYMSSV*QAAMPH
Trigger: GTGTGGCATTGCTGCCTGCCAGACGGATGACATATA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGTGTGCCTCAGCTGGCTaGTTCCAATCTGTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLCASAG*FQSVVV
Trigger: CACAACCACAGATTGGAACCAGCCAGCTGAGGCACA...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTTGCTGTGCCTCAGCTaGCTGGTTCCAATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDALLCLS*LVPICG
Trigger: ACCACAGATTGGAACCAGCCAGCTGAGGCACAGCAA...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTTGCTGTGCCTCAGCTaGCTGGTTCCAATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEELLCLS*LVPICG
Trigger: ACCACAGATTGGAACCAGCCAGCTGAGGCACAGCAA...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATTTGCTGTGCCTCAGCTaGCTGGTTCCAATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNLLCLS*LVPICG
Trigger: ACCACAGATTGGAACCAGCCAGCTGAGGCACAGCAA...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAATTTCCAGCTCATGGTaGATAAGGGTGAAGGTATCC +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTISSSW*IRVKVS
Trigger: GGATACCTTCACCCTTATCCACCATGAGCTGGAAAT...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGACTGAGCTGGGTTGGTaGAAATTTCCAGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGTELGW*KFPAHG
Trigger: ACCATGAGCTGGAAATTTCCACCAACCCAGCTCAGT...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCATACTGAGCTGGGTTaGTGGAAATTTCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: GPIPWVLLSCCLSGPEPDHTELG*WKFPAH
Trigger: ATGAGCTGGAAATTTCCACCAACCCAGCTCAGTATG...ATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAACATGGCATACTGAGCTaGGTTGGTGGAAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQHGILS*VGGNFQ
Trigger: CTGGAAATTTCCACCAACCCAGCTCAGTATGCCATG...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTTAGCCCGCTGCAGTTaGAAATCCTTAAAACACCTG +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPLARCS*KSLKHL
Trigger: CAGGTGTTTTAAGGATTTCCAACTGCAGCGGGCTAA...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTTTAGCCCGCTGCAGTTaGAAATCCTTAAAACACCTG +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPLARCS*KSLKHL
Trigger: CAGGTGTTTTAAGGATTTCCAACTGCAGCGGGCTAA...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCCCTTATAGACAGCATTaGGGAGGAGGTTGTTCATGG +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLPYRQH*GGGCSW
Trigger: CCATGAACAACCTCCTCCCCAATGCTGTCTATAAGG...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCAACTGGTGTGTCAGCTaGATGGTGAGAGGCACCACA +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCNWCVS*MVRGTT
Trigger: TGTGGTGCCTCTCACCATCCAGCTGACACACCAGTT...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGCCGAGGCTTCACCACTaGTATTCCAGTAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLPRLHH*YSSSHQ
Trigger: CTGGTGACTACTGGAATACCAGTGGTGAAGCCTCGG...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATGTCCATGTGTTGTTGTaGTACTCCAGACAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNVHVLL*YSRQGS
Trigger: GCTGCCCTGTCTGGAGTACCACAACAACACATGGAC...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGTCCATGTGTTGTTGTaGTACTCCAGACAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLVHVLL*YSRQGS
Trigger: GCTGCCCTGTCTGGAGTACCACAACAACACATGGAC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTTCTCTTTGATTACCTaGGCAACCAGGGCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPFSLIT*ATRALR
Trigger: CCGCAAAGCCCTGGTTGCCCAGGTAATCAAAGAGAA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGTGCGCCTGCCAAAGATaGACTTCTTGCCAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLCACQR*TSCQGS
Trigger: AGAACCCTGGCAAGAAGTCCATCTTTGGCAGGCGCA...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GCAGCTGATCCTCATCACGGTGGTACAGGAACTGCAGCAGCTTCAGAGTCCAAGTCTGTAGGTCCGTTCTaGTACGCACTTCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: AADPHHGGTGTAAASESKSVGPF*YALLQS
Trigger: GCTTTGGAGAAGTGCGTATCAGAACGGACCTACAGA...CTTGGACTCTGAAGCTGCTGCAGTTCCTGTACCACCGTGATGAGGATCAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR TCA 90 bp AAGGGGCAGCTGATCCTCATCACGGTGGTACAGGAACTGCAGCAGCTTCAGAGTCAGGTGTCCTCCAGCTaGCCACTCTTTAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: KGQLILITVVQELQQLQSQVSSS*PLFRTL
Trigger: CAAAGTTCTAAAGAGTGGTCAGCTGGAGGACACCTG...ACTCTGAAGCTGCTGCAGTTCCTGTACCACCGTGATGAGGATCAGCTGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR TCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATAGCTACCCTGTAGTGTaGAGGAGTCCAGAACAAGTG +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNSYPVV*RSPEQV
Trigger: CACTTGTTCTGGACTCCTTCACACTACAGGGTAGCT...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGTTGCATCTTCTCCGTaGCTGATTTCACCAGCGCTA +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLVASSP*LISPAL
Trigger: TAGCGCTGGTGAAATCAGTCACGGAGAAGATGCAAC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAAGCATTCGACACCACTaGATGACAAGATCTAATCCC +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQSIRHH*MTRSNP
Trigger: GGGATTAGATCTTGTCATTCAGTGGTGTCGAATGCT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACAGCATTCGACACCACTaGATGACAAGATCTAATCCC +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHSIRHH*MTRSNP
Trigger: GGGATTAGATCTTGTCATTCAGTGGTGTCGAATGCT...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAAGTCATGGTAGAATTTaGGTGGGGGCATGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLESHGRI*VGACSS
Trigger: AGAGGAACATGCCCCCACTCAAATTCTACCATGACT...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CTTGATCAGGACTATCCCCCTACCCTTTCACTTGACCCCAAGGGAATAGGGTCCAGAGTGACACTATGGTaGTCATGGGGGTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: LDQDYPPTLSLDPKGIGSRVTLW*SWGFPW
Trigger: CCATGGGAACCCCCATGATCACCATAGTGTCACTCT...GGACCCTATTCCCTTGGGGTCAAGTGAAAGGGTAGGGGGATAGTCCTGATCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR TCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGCTGATTCCTCTTCTGTaGACACTACAAACCTATCTG +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLLIPLL*TLQTYL
Trigger: CAGATAGGTTTGTAGTGTTCACAGAAGAGGAATCAG...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGTCACTCATGCCTaGTTCCTCTTCTGTGAACAC +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVLVTHA*FLFCEH
Trigger: GTGTTCACAGAAGAGGAATCAGGCATGAGTGACCAG...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCCCACGAAGAACCATCTaGCAGTTGACCAATTCAATA +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPPRRTI*QLTNSI
Trigger: TATTGAATTGGTCAACTGTCAGATGGTTCTTCGTGG...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCCACGAAGAACCATCTaGCAGTTGACCAATTCAATA +
Preference number: 4 (lower is better)
Translates to: GPIPWVLLSCCLSGPEPDPRRTI*QLTNSI
Trigger: TATTGAATTGGTCAACTGTCAGATGGTTCTTCGTGG...ATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR TCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACACCACGAAGAACCATCTaGCAGTTGACCAATTCAATA +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTPRRTI*QLTNSI
Trigger: TATTGAATTGGTCAACTGTCAGATGGTTCTTCGTGG...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACTCAGGTGGCTTAATCTaGGTTGCTAGTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHSGGLI*VASSGS
Trigger: TGATCCTGAACTAGCAACTCAGATTAAGCCACCTGA...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGTGGCGATTTGCGAAATaGCCTTCTGACCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLWRFAK*PSDPRT
Trigger: AGTTCTGGGGTCAGAAGGTCATTTCGCAAATCGCCA...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGCGATTTGCGAAATaGCCTTCTGACCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCWRFAK*PSDPRT
Trigger: AGTTCTGGGGTCAGAAGGTCATTTCGCAAATCGCCA...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGTTCAGTGCTCATCTGTaGCATATCAGAGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLFSAHL*HIRVCC
Trigger: ACAGCAAACTCTGATATGGCACAGATGAGCACTGAA...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCGCCTTGCAACAGGGTTaGATCTTCTCCGTGACTGAT +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCALQQG*IFSVTD
Trigger: ATCAGTCACGGAGAAGATGCAACCCTGTTGCAAGGC...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGGCCTTGCAACAGGGTTaGATCTTCTCCGTGACTGAT +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEALQQG*IFSVTD
Trigger: ATCAGTCACGGAGAAGATGCAACCCTGTTGCAAGGC...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCGTTGCCCAGAAGTTTTaGATCCAGCGCAGGGTACTA +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAVAQKF*IQRRVL
Trigger: TAGTACCCTGCGCTGGATGCAAAACTTCTGGGCAAC...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGTTGCCCAGAAGTTTTaGATCCAGCGCAGGGTACTA +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLVAQKF*IQRRVL
Trigger: TAGTACCCTGCGCTGGATGCAAAACTTCTGGGCAAC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAGACACTTGTCCAAGTTaGCCAGAAGTTTTGCATCCA +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQDTCPS*PEVLHP
Trigger: TGGATGCAAAACTTCTGGGCAACTTGGACAAGTGTC...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGACAGCCTTCTGTCTCTaGTCCACGAAGAACCATCTG +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLTAFCL*STKNHL
Trigger: CAGATGGTTCTTCGTGGAGCAGAGACAGAAGGCTGT...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGCAAAGTACTGCATaGCATCCAAGAGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCWQSTA*HPRGKS
Trigger: GGACTTGCCTCTTGGATGGCATGCAGTACTTTGCCA...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGAGTATGCTGCTGCGTTaGTCCTCTGGATTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVSMLLR*SSGLLE
Trigger: CTCTAGCAATCCAGAGGAGCAACGCAGCAGCATACT...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATAATGCAGTATGCTGCTaGGTTGCTCCTCTGGATTGC +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNNAVCC*VAPLDC
Trigger: GCAATCCAGAGGAGCAACGCAGCAGCATACTGCATT...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCAATGCAGTATGCTGCTaGGTTGCTCCTCTGGATTGC +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDANAVCC*VAPLDC
Trigger: GCAATCCAGAGGAGCAACGCAGCAGCATACTGCATT...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGGCAAATGCAGTATGCTaGTGCGTTGCTCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEANAVC*CVAPLD
Trigger: ATCCAGAGGAGCAACGCAGCAGCATACTGCATTTGC...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCGCAAATGCAGTATGCTaGTGCGTTGCTCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCANAVC*CVAPLD
Trigger: ATCCAGAGGAGCAACGCAGCAGCATACTGCATTTGC...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTGCAGATTCTCATTCTTaGTGTCATCCTGCAAAGACT +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPADSHS*CHPAKT
Trigger: AGTCTTTGCAGGATGACAGCAAGAATGAGAATCTGC...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCCAGACTTATTCACCTTaGTGTAGAGGAACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLQTYSP*CRGTSA
Trigger: TGCAGAGGTTCCTCTACAGCAAGGTGAATAAGTCTG...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTAGGGCCCAGTGGTACTaGATCATCTGTTGCAATCAG +
Preference number: 4 (lower is better)
Translates to: DRTQHYCPPCPAANRPGARAQWY*IICCNQ
Trigger: CTGATTGCAACAGATGATGCAGTACCACTGGGCCCT...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGCAAAGATGGACTTCTTaGCAGGGTTCTTGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLQRWTS*QGSCRP
Trigger: TGGGCGACAAGAACCCTGGCAAGAAGTCCATCTTTG...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCAAATCATTTGCGCCTaGCAAAGATGGACTTCTTGC +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGQIICA*QRWTSC
Trigger: GCAAGAAGTCCATCTTTGGCAGGCGCAAATGATTTG...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCCAAATCATTTGCGCCTaGCAAAGATGGACTTCTTGC +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLQIICA*QRWTSC
Trigger: GCAAGAAGTCCATCTTTGGCAGGCGCAAATGATTTG...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACAATCGCCAAATCATTTaGGCCTGCCAAAGATGGACT +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHNRQII*ACQRWT
Trigger: AGTCCATCTTTGGCAGGCGCAAATGATTTGGCGATT...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCAGTCAGATCCTGTACTaGAGCCACTCGAATCGCCAA +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDASQILY*SHSNRQ
Trigger: TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACT...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATATCTTAACCTTGACCTaGTCTGGCAGCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNILTLT*SGSCWR
Trigger: TCTCCAGCAGCTGCCAGACCAGGTCAAGGTTAAGAT...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGATGCGTTGGCGACTCTaGGACAACAACAACCCATCT +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVMRWRL*DNNNPS
Trigger: AGATGGGTTGTTGTTGTCCCAGAGTCGCCAACGCAT...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGATGCGTTGGCGACTCTaGGACAACAACAACCCATCT +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLMRWRL*DNNNPS
Trigger: AGATGGGTTGTTGTTGTCCCAGAGTCGCCAACGCAT...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCCTGATGGATGCTTTGTaGCCTGAGGTGCTGGTAATC +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDALMDAL*PEVLVI
Trigger: GATTACCAGCACCTCAGGCCACAAAGCATCCATCAG...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCTGATGGATGCTTTGTaGCCTGAGGTGCTGGTAATC +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNLMDAL*PEVLVI
Trigger: GATTACCAGCACCTCAGGCCACAAAGCATCCATCAG...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCCCTGAAGTCCTCGAATaGTACAATCAAGAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPPEVLE*YNQEKG
Trigger: CCCTTTTTCTTGATTGTACCATTCGAGGACTTCAGG...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTCTCAGGAAACACAGTaGCTCTTAGTAGGTCTCGGC +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEESQETQ*LLVGLG
Trigger: GCCGAGACCTACTAAGAGCCACTGTGTTTCCTGAGA...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTTCTCAGGAAACACAGTaGCTCTTAGTAGGTCTCGGC +
Preference number: 4 (lower is better)
Translates to: DRTQHYCPPCPAANRPGASQETQ*LLVGLG
Trigger: GCCGAGACCTACTAAGAGCCACTGTGTTTCCTGAGA...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATATGTGCCAGTCTCCATaGAACAGAAGACGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNMCQSP*NRRRLL
Trigger: CAAGAGCCGTCTTCTGTTCCATGGAGACTGGCACAT...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGATGTGCCAGTCTCCATaGAACAGAAGACGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEMCQSP*NRRRLL
Trigger: CAAGAGCCGTCTTCTGTTCCATGGAGACTGGCACAT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGGACAAGCTCAGCAGGTaGGTCTTTGTTACCAAGGGA +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEDKLSR*VFVTKG
Trigger: TCCCTTGGTAACAAAGACCCACCTGCTGAGCTTGTC...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGACAAGCTCAGCAGGTaGGTCTTTGTTACCAAGGGA +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLDKLSR*VFVTKG
Trigger: TCCCTTGGTAACAAAGACCCACCTGCTGAGCTTGTC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCCCCGCTTTGGCTTTTTaGCTGGCATCTGTGGATCAA +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAPALAF*LASVDQ
Trigger: TTGATCCACAGATGCCAGCCAAAAAGCCAAAGCGGG...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTTATATGTCATCCGTCTaGCAGGCAGCAATGCCACAC +
Preference number: 4 (lower is better)
Translates to: DRTQHYCPPCPAANRPGAYMSSV*QAAMPH
Trigger: GTGTGGCATTGCTGCCTGCCAGACGGATGACATATA...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGGGCTGCTTTCAGTGGTaGCAAAGTACTGCATGCCAT +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVGCFQW*QSTACH
Trigger: ATGGCATGCAGTACTTTGCCACCACTGAAAGCAGCC...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CTTGATCAGGACTATCCCCCTACCCTTTCACTTGACCCCAAGGGAATAGGGTCCTGGGGCTGCTTTCAGTaGTGGCAAAGTACTGCATGC +
Preference number: 4 (lower is better)
Translates to: LDQDYPPTLSLDPKGIGSWGCFQ*WQSTAC
Trigger: GCATGCAGTACTTTGCCACCACTGAAAGCAGCCCCA...GGACCCTATTCCCTTGGGGTCAAGTGAAAGGGTAGGGGGATAGTCCTGATCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACATTTCCAGCTCATGGTaGATAAGGGTGAAGGTATCC +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHISSSW*IRVKVS
Trigger: GGATACCTTCACCCTTATCCACCATGAGCTGGAAAT...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAACTGAGCTGGGTTGGTaGAAATTTCCAGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLETELGW*KFPAHG
Trigger: ACCATGAGCTGGAAATTTCCACCAACCCAGCTCAGT...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCAGTACTGAGCTGGGTTGGTaGAAATTTCCAGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: PFPGSCSLVASLALSLISTELGW*KFPAHG
Trigger: ACCATGAGCTGGAAATTTCCACCAACCCAGCTCAGT...ACTGATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAACATGGCATACTGAGCTaGGTTGGTGGAAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEHGILS*VGGNFQ
Trigger: CTGGAAATTTCCACCAACCCAGCTCAGTATGCCATG...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGCAATGTCCAGGATCATaGCATACTGAGCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEQCPGS*HTELGW
Trigger: CCAACCCAGCTCAGTATGCCATGATCCTGGACATTG...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCAATGTCCAGGATCATaGCATACTGAGCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVQCPGS*HTELGW
Trigger: CCAACCCAGCTCAGTATGCCATGATCCTGGACATTG...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATGCTGCGTTGCTCCTCTaGATTGCTAGAGATCTCAAG +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNAALLL*IARDLK
Trigger: CTTGAGATCTCTAGCAATCCAGAGGAGCAACGCAGC...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGCTGCGTTGCTCCTCTaGATTGCTAGAGATCTCAAG +
Preference number: 4 (lower is better)
Translates to: DRTQHYCPPCPAANRPGAAALLL*IARDLK
Trigger: CTTGAGATCTCTAGCAATCCAGAGGAGCAACGCAGC...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCTTAGCCCGCTGCAGTTaGAAATCCTTAAAACACCTG +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLLARCS*KSLKHL
Trigger: CAGGTGTTTTAAGGATTTCCAACTGCAGCGGGCTAA...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTTTCTCTTTGATTACCTaGGCAACCAGGGCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: DRTQHYCPPCPAANRPGAFSLIT*ATRALR
Trigger: CCGCAAAGCCCTGGTTGCCCAGGTAATCAAAGAGAA...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
3UTR CAA 72 bp CTGGCAGCTGCTGGAGAAGGAATAGGCCAGGCAGAGTaGGCTCAACTAAGTTTTCTGTCACCTCTGAACAGG +
Preference number: 4 (lower is better)
Translates to: LAAAGEGIGQAE*AQLSFLSPLNR
Trigger: CCTGTTCAGAGGTGACAGAAAACTTAGTTGAGCCAACTCTGCCTGGCCTATTCCTTCTCCAGCAGCTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR TCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCGTTTGCTGGTGTTGCTaGAACTTAAGACTGACATTC +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLVCWCC*NLRLTF
Trigger: GAATGTCAGTCTTAAGTTTCAGCAACACCAGCAAAC...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ATGGACAATACCACGCTTGTGTTCTCCATCTTAACCTTGACCTGGTCTGGCAGCAAGGACAGTTCCTTTTaGTCCACCCCAGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: MDNTTLVFSILTLTWSGSKDSSF*STPALW
Trigger: CCAGAGCGCTGGGGTGGATCAAAAGGAACTGTCCTT...GCTGCCAGACCAGGTCAAGGTTAAGATGGAGAACACAAGCGTGGTATTGTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR TCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCTCAATAAGGATGGGCTaGAGGACAGTTCCTTTTGAT +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLSIRMG*RTVPFD
Trigger: ATCAAAAGGAACTGTCCTTCAGCCCATCCTTATTGA...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACTCAATAAGGATGGGCTaGAGGACAGTTCCTTTTGAT +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHSIRMG*RTVPFD
Trigger: ATCAAAAGGAACTGTCCTTCAGCCCATCCTTATTGA...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCCTGCTTCTACTGATCTaGATATGCCATAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLLLLLI*ICHKDS
Trigger: TGAGTCCTTATGGCATATTCAGATCAGTAGAAGCAG...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCGAAATCTGCTTCTACTaGTCTGAATATGCCATAAGG +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPEICFY*SEYAIR
Trigger: CCTTATGGCATATTCAGATCAGTAGAAGCAGATTTC...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGGTTTTCTGTCACCTCTaGACAGGGAACAGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVVFCHL*TGNRLR
Trigger: TCTAAGCCTGTTCCCTGTTCAGAGGTGACAGAAAAC...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGTTTTCTGTCACCTCTaGACAGGGAACAGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLVFCHL*TGNRLR
Trigger: TCTAAGCCTGTTCCCTGTTCAGAGGTGACAGAAAAC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCGTCAGGTGCCTCTTTTaGCTATTCATGGACAATACC +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPVRCLF*LFMDNT
Trigger: GGTATTGTCCATGAATAGTCAAAAGAGGCACCTGAC...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CAGCTGATCCTCATCACGGTGGTACAGGAACTGCAGCAGCTTCAGAGTCCAAGTTATCAGAGTTTGCTGTaGAGCTTCGAAGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QLILITVVQELQQLQSPSYQSLL*SFEGAA
Trigger: AGCTGCCCCTTCGAAGCTTCACAGCAAACTCTGATA...ACTTGGACTCTGAAGCTGCTGCAGTTCCTGTACCACCGTGATGAGGATCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581267.1
ENST00000583403.5
CDS-3UTR TCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATGGTGCCGGTAGTGAATaGTGCAAGTGTTCAGAACTA +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNGAGSE*CKCSEL
Trigger: TAGTTCTGAACACTTGCATCATTCACTACCGGCACC...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATTCTGATGCTTCCACCTaGAGTCCTCGAATGGTACAA +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNSDAST*SPRMVQ
Trigger: TTGTACCATTCGAGGACTTCAGGTGGAAGCATCAGA...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTTCGACACCACTGAATaGCAAGATCTAATCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPFDTTE*QDLIPQ
Trigger: CTGAGGGATTAGATCTTGTCATTCAGTGGTGTCGAA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTATCCAAGTCACCCTTaGACACAAACTGACCAGGTT +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPYPSHP*TQTDQV
Trigger: AACCTGGTCAGTTTGTGTTCAAGGGTGACTTGGATA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTGGGTTTCAGGTTATTaGAGAGCTTTCCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAWVSGY*RAFPCR
Trigger: TCTGCAGGGGAAAGCTCTTCAATAACCTGAAACCCA...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATTGGGTTTCAGGTTATTaGAGAGCTTTCCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNWVSGY*RAFPCR
Trigger: TCTGCAGGGGAAAGCTCTTCAATAACCTGAAACCCA...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGAGGATCATGGCATACTaGGCTGGGTTGGTGGAAATT +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEERIMAY*AGLVEI
Trigger: AATTTCCACCAACCCAGCTCAGTATGCCATGATCCT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTAGGATCATGGCATACTaGGCTGGGTTGGTGGAAATT +
Preference number: 4 (lower is better)
Translates to: DRTQHYCPPCPAANRPGARIMAY*AGLVEI
Trigger: AATTTCCACCAACCCAGCTCAGTATGCCATGATCCT...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCGAATCTTTATGTAGATaGAGGAGTTGTTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPESLCR*RSCSWQ
Trigger: CTGCCATGAACAACTCCTTCATCTACATAAAGATTC...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAAAATTTATCACACTTaGTCAGGACTATCCCCCTAC +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWKIYHT*SGLSPY
Trigger: GTAGGGGGATAGTCCTGATCAAGTGTGATAAATTTT...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp CATGACAGTGGAGTGAGGATCAGAGGATCAGCCCCCTCCCGTTTCCTGGCACAGTTCAGTGCTCATCTGTaGCATATCAGAGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HDSGVRIRGSAPSRFLAQFSAHL*HIRVCC
Trigger: ACAGCAAACTCTGATATGGCACAGATGAGCACTGAA...CTGTGCCAGGAAACGGGAGGGGGCTGATCCTCTGATCCTCACTCCACTGTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp CCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCAGTGATATTGTTCCACTGTaGCGAGTCAGATCCATCTTG +
Preference number: 4 (lower is better)
Translates to: PFPGSCSLVASLALSLISDIVPL*RVRSIL
Trigger: CAAGATGGATCTGACTCGGCACAGTGGAACAATATC...ACTGATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAACGTTTGAGTACAGCTaGCTTTTTGTACCCATCATA +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTTFEYS*LFVPII
Trigger: TATGATGGGTACAAAAAGGCAGCTGTACTCAAACGT...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGACGTTTGAGTACAGCTaGCTTTTTGTACCCATCATA +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWTFEYS*LFVPII
Trigger: TATGATGGGTACAAAAAGGCAGCTGTACTCAAACGT...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTACGTTTGAGTACAGCTaGCTTTTTGTACCCATCATA +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPTFEYS*LFVPII
Trigger: TATGATGGGTACAAAAAGGCAGCTGTACTCAAACGT...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGTCCAGGATGTCTTTTaGTTCAATGTATCACCATAC +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLVQDVF*FNVSPY
Trigger: GTATGGTGATACATTGAAGCAAAAGACATCCTGGAC...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGGAACCTGACCCGTTaGTTCTTCTCACTATGTTCC +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEWNLTR*FFSLCS
Trigger: GGAACATAGTGAGAAGAAGCAACGGGTCAGGTTCCA...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCGCAGATTCTCATTCTTaGTGTCATCCTGCAAAGACT +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLADSHS*CHPAKT
Trigger: AGTCTTTGCAGGATGACAGCAAGAATGAGAATCTGC...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTATCTTGTTAGCCCGCTaGAGTTGGAAATCCTTAAAA +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPILLAR*SWKSLK
Trigger: TTTTAAGGATTTCCAACTGCAGCGGGCTAACAAGAT...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCCTCACATCTTCTTGCTaGTTTCGCAGCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDALTSSC*FRSSIL
Trigger: CAAGATGGAGCTGCGAAAGCAGCAAGAAGATGTGAG...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCCTCCAGAAGATGTTCTaGTGTGTCATCAGACTTATT +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPLQKMF*CVIRLI
Trigger: AATAAGTCTGATGACACAGCAGAACATCTTCTGGAG...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTACTGCATCATCTGTTaGAATCAGCTGCCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAYCIIC*NQLPRL
Trigger: AAGCCTCGGCAGCTGATTGCAACAGATGATGCAGTA...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCCTCTTCCTGCTGTTaGATGTTCAGGTCCGATTTA +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLESSSCC*MFRSDL
Trigger: TAAATCGGACCTGAACATGCAACAGCAGGAAGAGGA...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAACAAATCATTTGCGCCTaGCAAAGATGGACTTCTTGC +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEQIICA*QRWTSC
Trigger: GCAAGAAGTCCATCTTTGGCAGGCGCAAATGATTTG...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAAATCGCCAAATCATTTaGGCCTGCCAAAGATGGACT +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLENRQII*ACQRWT
Trigger: AGTCCATCTTTGGCAGGCGCAAATGATTTGGCGATT...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAACAATGCCACATAGTGTaGAAGATCATGGCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEQCHIV*KIMAKE
Trigger: CTCCTTAGCCATGATCTTCCACACTATGTGGCATTG...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCCAATGCCACATAGTGTaGAAGATCATGGCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPQCHIV*KIMAKE
Trigger: CTCCTTAGCCATGATCTTCCACACTATGTGGCATTG...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGTAGCTGTAGTCTTTTaGCACTCTCCTTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLVAVVF*HSPYFH
Trigger: ATGAAAGTAAGGAGAGTGCCAAAAGACTACAGCTAC...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGGTAGCTGTAGTCTTTTaGCACTCTCCTTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEVAVVF*HSPYFH
Trigger: ATGAAAGTAAGGAGAGTGCCAAAAGACTACAGCTAC...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTGTAGCTGTAGTCTTTTaGCACTCTCCTTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPVAVVF*HSPYFH
Trigger: ATGAAAGTAAGGAGAGTGCCAAAAGACTACAGCTAC...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCGAAATTTCCAGCTCATaGTGGATAAGGGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLEISSS*WIRVKV
Trigger: TACCTTCACCCTTATCCACCATGAGCTGGAAATTTC...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCCATGGCATACTGAGCTaGGTTGGTGGAAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAHGILS*VGGNFQ
Trigger: CTGGAAATTTCCACCAACCCAGCTCAGTATGCCATG...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCTTAGGTTCTACATaGAGCAGCAGGTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNRLGST*SSRLLT
Trigger: TGTCAACAACCTGCTGCTCCATGTAGAACCTAAGCG...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTCCTTATAGACAGCATTaGGGAGGAGGTTGTTCATGG +
Preference number: 4 (lower is better)
Translates to: DRTQHYCPPCPAANRPGAPYRQH*GGGCSW
Trigger: CCATGAACAACCTCCTCCCCAATGCTGTCTATAAGG...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCCTTATAGACAGCATTaGGGAGGAGGTTGTTCATGG +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVPYRQH*GGGCSW
Trigger: CCATGAACAACCTCCTCCCCAATGCTGTCTATAAGG...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGAAGCCCATCATTCTGTaGAAGAACTGGTGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEKPIIL*KNWCVS
Trigger: GCTGACACACCAGTTCTTCCACAGAATGATGGGCTT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGGTAGCTGACACACAGTaGAACCTGTGGAATCTTTAT +
Preference number: 4 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGVADTQ*NLWNLY
Trigger: ATAAAGATTCCACAGGTTCCACTGTGTGTCAGCTAC...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GCTTCGAAGGGGCAGCTGATCCTCATCACGGTGGTACAGGAACTGCAGCAGCTTCTGCTTCTACTGATCTaGATATGCCATAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: ASKGQLILITVVQELQQLLLLLI*ICHKDS
Trigger: TGAGTCCTTATGGCATATTCAGATCAGTAGAAGCAG...AAGCTGCTGCAGTTCCTGTACCACCGTGATGAGGATCAGCTGCCCCTTCGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR TCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACATTAGAACTTTGCTGTTaGTCTTACATAAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTLELCC*SYISSP
Trigger: AGGTGAGCTTATGTAAGATCAACAGCAAAGTTCTAA...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCGTCAGGTGCCTCTTTTaGCTATTCATGGACAATACC +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAVRCLF*LFMDNT
Trigger: GGTATTGTCCATGAATAGTCAAAAGAGGCACCTGAC...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCGTCAGGTGCCTCTTTTaGCTATTCATGGACAATACC +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCVRCLF*LFMDNT
Trigger: GGTATTGTCCATGAATAGTCAAAAGAGGCACCTGAC...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CTTGATCAGGACTATCCCCCTACCCTTTCACTTGACCCCAAGGGAATAGGGTCCGGTGCCGGTAGTGAATaGTGCAAGTGTTCAGAACTA +
Preference number: 4 (lower is better)
Translates to: LDQDYPPTLSLDPKGIGSGAGSE*CKCSEL
Trigger: TAGTTCTGAACACTTGCATCATTCACTACCGGCACC...GGACCCTATTCCCTTGGGGTCAAGTGAAAGGGTAGGGGGATAGTCCTGATCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR TCA 90 bp GCTGATCCTCATCACGGTGGTACAGGAACTGCAGCAGCTTCAGAGTCCAAGTCAGGTGCCGGTAGTGAATaGTGCAAGTGTTCAGAACTA +
Preference number: 4 (lower is better)
Translates to: ADPHHGGTGTAAASESKSGAGSE*CKCSEL
Trigger: TAGTTCTGAACACTTGCATCATTCACTACCGGCACC...TGACTTGGACTCTGAAGCTGCTGCAGTTCCTGTACCACCGTGATGAGGATCAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581267.1
CDS-3UTR TCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTTCGACACCACTGAATaGCAAGATCTAATCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAFDTTE*QDLIPQ
Trigger: CTGAGGGATTAGATCTTGTCATTCAGTGGTGTCGAA...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATCCAAGTCACCCTTaGACACAAACTGACCAGGTT +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAYPSHP*TQTDQV
Trigger: AACCTGGTCAGTTTGTGTTCAAGGGTGACTTGGATA...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTCAGGTGGCTTAATCTaGGTTGCTAGTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEESGGLI*VASSGS
Trigger: TGATCCTGAACTAGCAACTCAGATTAAGCCACCTGA...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAGAATCTTTATGTAGATaGAGGAGTTGTTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQESLCR*RSCSWQ
Trigger: CTGCCATGAACAACTCCTTCATCTACATAAAGATTC...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTACCTCTTTCAAACATaGCAGTGGAGTGAGGATCAG +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCYLFQT*QWSEDQ
Trigger: CTGATCCTCACTCCACTGTCATGTTTGAAAGAGGTA...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATTCAGTGCTCATCTGTaGCATATCAGAGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEFSAHL*HIRVCC
Trigger: ACAGCAAACTCTGATATGGCACAGATGAGCACTGAA...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp TTTAGAACAGGTGAACTAGACCCTTGGGTTTCCAGTGCTAGCAGGTGCAGCCAGCCAGCAGCAGTTCAGTaGTCATCTGTGCCATATCAG +
Preference number: 4 (lower is better)
Translates to: FRTGELDPWVSSASRCSQPAAVQ*SSVPYQ
Trigger: CTGATATGGCACAGATGAGCACTGAACTGCTGCTGG...CTGGCTGCACCTGCTAGCACTGGAAACCCAAGGGTCTAGTTCACCTGTTCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581267.1
CDS-3UTR GCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGTGGCTCCACTCCCAGTaGATATTTTCAGTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLWLHSQ*IFSVVL
Trigger: CAACACAACTGAAAATATGCACTGGGAGTGGAGCCA...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCGACACTTGTCCAAGTTaGCCAGAAGTTTTGCATCCA +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDADTCPS*PEVLHP
Trigger: TGGATGCAAAACTTCTGGGCAACTTGGACAAGTGTC...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCGTCCAGGATGTCTTTTaGTTCAATGTATCACCATAC +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLVQDVF*FNVSPY
Trigger: GTATGGTGATACATTGAAGCAAAAGACATCCTGGAC...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGATGATAGAATACATCTaGTTCTCCAGCTGTCGTATT +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWMIEYI*FSSCRI
Trigger: AATACGACAGCTGGAGAAGCAGATGTATTCTATCAT...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTTTCTTGCTGTCATCCTaGAAAGACTTCATGATAGAA +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPFLLSS*KDFMIE
Trigger: TTCTATCATGAAGTCTTTGCAGGATGACAGCAAGAA...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGCAAAGTAAAACTCAGTaGGACGGACCACACTCACAT +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLQSKTQ*DGPHSH
Trigger: ATGTGAGTGTGGTCCGTCGCACTGAGTTTTACTTTG...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCTCCAGAAGATGTTCTaGTGTGTCATCAGACTTATT +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHLQKMF*CVIRLI
Trigger: AATAAGTCTGATGACACAGCAGAACATCTTCTGGAG...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAACTCCAGAAGATGTTCTaGTGTGTCATCAGACTTATT +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQLQKMF*CVIRLI
Trigger: AATAAGTCTGATGACACAGCAGAACATCTTCTGGAG...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAACATTTACCTCAAAATaGTCCTTAACAGAGATACCC +
Preference number: 4 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTTFTSK*SLTEIP
Trigger: GGGTATCTCTGTTAAGGAGCATTTTGAGGTAAATGT...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCACATTTACCTCAAAATaGTCCTTAACAGAGATACCC +
Preference number: 4 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPTFTSK*SLTEIP
Trigger: GGGTATCTCTGTTAAGGAGCATTTTGAGGTAAATGT...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATTCCTCTTCCTGCTGTTaGATGTTCAGGTCCGATTTA +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNSSSCC*MFRSDL
Trigger: TAAATCGGACCTGAACATGCAACAGCAGGAAGAGGA...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCAATCGCCAAATCATTTaGGCCTGCCAAAGATGGACT +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCNRQII*ACQRWT
Trigger: AGTCCATCTTTGGCAGGCGCAAATGATTTGGCGATT...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GGACAATACCACGCTTGTGTTCTCCATCTTAACCTTGACCTGGTCTGGCAGCTGATCTTAACCTTGACCTaGTCTGGCAGCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GQYHACVLHLNLDLVWQLILTLT*SGSCWR
Trigger: TCTCCAGCAGCTGCCAGACCAGGTCAAGGTTAAGAT...CAGCTGCCAGACCAGGTCAAGGTTAAGATGGAGAACACAAGCGTGGTATTGTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR CCA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTTCTTTTGACTATTCATaGACAATACCACGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPSFDYS*TIPRLC
Trigger: ACACAAGCGTGGTATTGTCCATGAATAGTCAAAAGA...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGTCTTTTGACTATTCATaGACAATACCACGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: THKSSWITGSPSHPTSPWSFDYS*TIPRLC
Trigger: ACACAAGCGTGGTATTGTCCATGAATAGTCAAAAGA...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp GGGACAACAACAACCCATCTTCCAGCAGCAGTTCAGTGCTCATCTGTGCCATATGGTGAACTAGACCCTTaGGTTTCCAGTGCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: GTTTTHLPAAVQCSSVPYGELDP*VSSASR
Trigger: CCTGCTAGCACTGGAAACCCAAGGGTCTAGTTCACC...ATATGGCACAGATGAGCACTGAACTGCTGCTGGAAGATGGGTTGTTGTTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581267.1
CDS-3UTR CCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGATTTCCAGCTCATGGTaGATAAGGGTGAAGGTATCC +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVISSSW*IRVKVS
Trigger: GGATACCTTCACCCTTATCCACCATGAGCTGGAAAT...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGCATACTGAGCTGGGTTaGTGGAAATTTCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEHTELG*WKFPAH
Trigger: ATGAGCTGGAAATTTCCACCAACCCAGCTCAGTATG...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGTCAATAAGGATGGGCTaGAGGACAGTTCCTTTTGAT +
Preference number: 4 (lower is better)
Translates to: ETELSITVHHALQRTDQVSIRMG*RTVPFD
Trigger: ATCAAAAGGAACTGTCCTTCAGCCCATCCTTATTGA...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGCTGCTTCTACTGATCTaGATATGCCATAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLLLLLI*ICHKDS
Trigger: TGAGTCCTTATGGCATATTCAGATCAGTAGAAGCAG...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTCTGCTTCTACTGATCTaGATATGCCATAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: DRTQHYCPPCPAANRPGALLLLI*ICHKDS
Trigger: TGAGTCCTTATGGCATATTCAGATCAGTAGAAGCAG...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAGAAATCTGCTTCTACTaGTCTGAATATGCCATAAGG +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEEICFY*SEYAIR
Trigger: CCTTATGGCATATTCAGATCAGTAGAAGCAGATTTC...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACTTAGAACTTTGCTGTTaGTCTTACATAAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHLELCC*SYISSP
Trigger: AGGTGAGCTTATGTAAGATCAACAGCAAAGTTCTAA...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAGGTGTATCTCCAAGTTaGATGGAAATGTTGACATTG +
Preference number: 4 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEGVSPS*MEMLTL
Trigger: CAATGTCAACATTTCCATTCAACTTGGAGATACACC...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCTGATTCCTCTTCTGTaGACACTACAAACCTATCTG +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNLIPLL*TLQTYL
Trigger: CAGATAGGTTTGTAGTGTTCACAGAAGAGGAATCAG...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp CTCATCACGGTGGTACAGGAACTGCAGCAGCTTCAGAGTCCAAGTCAGGTGCCTTTCAGTGCTCATCTGTaGCATATCAGAGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LITVVQELQQLQSPSQVPFSAHL*HIRVCC
Trigger: ACAGCAAACTCTGATATGGCACAGATGAGCACTGAA...AGGCACCTGACTTGGACTCTGAAGCTGCTGCAGTTCCTGTACCACCGTGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581267.1
ENST00000583403.5
CDS-3UTR GCA 90 bp ATGGACAATACCACGCTTGTGTTCTCCATCTTAACCTTGACCTGGTCTGGCAGCCCAGCAGCAGTTCAGTaGTCATCTGTGCCATATCAG +
Preference number: 4 (lower is better)
Translates to: MDNTTLVFSILTLTWSGSPAAVQ*SSVPYQ
Trigger: CTGATATGGCACAGATGAGCACTGAACTGCTGCTGG...GCTGCCAGACCAGGTCAAGGTTAAGATGGAGAACACAAGCGTGGTATTGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR GCA 90 bp CATGACAGTGGAGTGAGGATCAGAGGATCAGCCCCCTCCCGTTTCCTGGCACAGATGATAGAATACATCTaGTTCTCCAGCTGTCGTATT +
Preference number: 4 (lower is better)
Translates to: HDSGVRIRGSAPSRFLAQMIEYI*FSSCRI
Trigger: AATACGACAGCTGGAGAAGCAGATGTATTCTATCAT...CTGTGCCAGGAAACGGGAGGGGGCTGATCCTCTGATCCTCACTCCACTGTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAATTCTTGCTGTCATCCTaGAAAGACTTCATGATAGAA +
Preference number: 4 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQFLLSS*KDFMIE
Trigger: TTCTATCATGAAGTCTTTGCAGGATGACAGCAAGAA...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGCAGATTCTCATTCTTaGTGTCATCCTGCAAAGACT +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLADSHS*CHPAKT
Trigger: AGTCTTTGCAGGATGACAGCAAGAATGAGAATCTGC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp TGCCCACCTTTAGACACAGGTCCAGGGCCAGTGAAAGCTCCACTAGGCAGGTGTTTCTCCAAAGCACAATaGCACATAGTGTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: CPPLDTGPGPVKAPLGRCFSKAQ*HIVSLF
Trigger: AAACAGTGACACTATGTGGCATTGTGCTTTGGAGAA...ACACCTGCCTAGTGGAGCTTTCACTGGCCCTGGACCTGTGTCTAAAGGTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR CCA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCTCTTTTGACTATTCATaGACAATACCACGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLSFDYS*TIPRLC
Trigger: ACACAAGCGTGGTATTGTCCATGAATAGTCAAAAGA...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGCCTGAAGTCCTCGAATaGTACAATCAAGAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEPEVLE*YNQEKG
Trigger: CCCTTTTTCTTGATTGTACCATTCGAGGACTTCAGG...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCCCTGAAGTCCTCGAATaGTACAATCAAGAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCPEVLE*YNQEKG
Trigger: CCCTTTTTCTTGATTGTACCATTCGAGGACTTCAGG...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CTTGATCAGGACTATCCCCCTACCCTTTCACTTGACCCCAAGGGAATAGGGTCCATACGAGACAGACATTaGGCACAGGTATCTGATGCT +
Preference number: 4 (lower is better)
Translates to: LDQDYPPTLSLDPKGIGSIRDRH*AQVSDA
Trigger: AGCATCAGATACCTGTGCCCAATGTCTGTCTCGTAT...GGACCCTATTCCCTTGGGGTCAAGTGAAAGGGTAGGGGGATAGTCCTGATCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGAAATTTCCAGCTCATaGTGGATAAGGGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLEISSS*WIRVKV
Trigger: TACCTTCACCCTTATCCACCATGAGCTGGAAATTTC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCGAAATTTCCAGCTCATaGTGGATAAGGGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCEISSS*WIRVKV
Trigger: TACCTTCACCCTTATCCACCATGAGCTGGAAATTTC...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CAACAACAACCCATCTTCCAGCAGCAGTTCAGTGCTCATCTGTGCCATATCAGAAACCTTGACCTGGTCTaGCAGCTGAACAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: QQQPIFQQQFSAHLCHIRNLDLV*QLNREQ
Trigger: CTGTTCCCTGTTCAGCTGCCAGACCAGGTCAAGGTT...TCTGATATGGCACAGATGAGCACTGAACTGCTGCTGGAAGATGGGTTGTTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581267.1
CDS-3UTR TCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGGAAATCTGCTTCTACTaGTCTGAATATGCCATAAGG +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEEICFY*SEYAIR
Trigger: CCTTATGGCATATTCAGATCAGTAGAAGCAGATTTC...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGGTGTATCTCCAAGTTaGATGGAAATGTTGACATTG +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLGVSPS*MEMLTL
Trigger: CAATGTCAACATTTCCATTCAACTTGGAGATACACC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATGGTGTATCTCCAAGTTaGATGGAAATGTTGACATTG +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNGVSPS*MEMLTL
Trigger: CAATGTCAACATTTCCATTCAACTTGGAGATACACC...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp CTTGATCAGGACTATCCCCCTACCCTTTCACTTGACCCCAAGGGAATAGGGTCCCTGATTCCTCTTCTGTaGACACTACAAACCTATCTG +
Preference number: 4 (lower is better)
Translates to: LDQDYPPTLSLDPKGIGSLIPLL*TLQTYL
Trigger: CAGATAGGTTTGTAGTGTTCACAGAAGAGGAATCAG...GGACCCTATTCCCTTGGGGTCAAGTGAAAGGGTAGGGGGATAGTCCTGATCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR GCA 90 bp GGAGTTGAGGCAGACAATGCGTTGGCGACTCTGGGACAACAACAACCCATCTTCTTCAGTGCTCATCTGTaGCATATCAGAGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GVEADNALATLGQQQPIFFSAHL*HIRVCC
Trigger: ACAGCAAACTCTGATATGGCACAGATGAGCACTGAA...GAAGATGGGTTGTTGTTGTCCCAGAGTCGCCAACGCATTGTCTGCCTCAACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581267.1
CDS-3UTR GCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCGTCCAGGATGTCTTTTaGTTCAATGTATCACCATAC +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAVQDVF*FNVSPY
Trigger: GTATGGTGATACATTGAAGCAAAAGACATCCTGGAC...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGATCTTGTTAGCCCGCTaGAGTTGGAAATCCTTAAAA +
Preference number: 4 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEILLAR*SWKSLK
Trigger: TTTTAAGGATTTCCAACTGCAGCGGGCTAACAAGAT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CAGGAACTGCAGCAGCTTCAGAGTCCAAGTCAGGTGCCTCTTTTGACTATTCATATGCGTTGGCGACTCTaGGACAACAACAACCCATCT +
Preference number: 4 (lower is better)
Translates to: QELQQLQSPSQVPLLTIHMRWRL*DNNNPS
Trigger: AGATGGGTTGTTGTTGTCCCAGAGTCGCCAACGCAT...ATGAATAGTCAAAAGAGGCACCTGACTTGGACTCTGAAGCTGCTGCAGTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581267.1
CDS-3UTR CCA 90 bp CTTGATCAGGACTATCCCCCTACCCTTTCACTTGACCCCAAGGGAATAGGGTCCGTAGCTGACACACAGTaGAACCTGTGGAATCTTTAT +
Preference number: 4 (lower is better)
Translates to: LDQDYPPTLSLDPKGIGSVADTQ*NLWNLY
Trigger: ATAAAGATTCCACAGGTTCCACTGTGTGTCAGCTAC...GGACCCTATTCCCTTGGGGTCAAGTGAAAGGGTAGGGGGATAGTCCTGATCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CCA 90 bp GCTGATCCTCATCACGGTGGTACAGGAACTGCAGCAGCTTCAGAGTCCAAGTCAATTAAGGAGACCATATaGGGCATGAGCAAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: ADPHHGGTGTAAASESKSIKETI*GMSKES
Trigger: ACTCTCTTTGCTCATGCCCCATATGGTCTCCTTAAT...TGACTTGGACTCTGAAGCTGCTGCAGTTCCTGTACCACCGTGATGAGGATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR TCA 90 bp CCGACCCATGAACCTTCCAGCAGCAGTTCAGTGCTCATCTGTGCCATATCAGAGGAAATCTGCTTCTACTaGTCTGAATATGCCATAAGG +
Preference number: 4 (lower is better)
Translates to: PTHEPSSSSSVLICAISEEICFY*SEYAIR
Trigger: CCTTATGGCATATTCAGATCAGTAGAAGCAGATTTC...CTCTGATATGGCACAGATGAGCACTGAACTGCTGCTGGAAGGTTCATGGGTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR TCA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTTTAGAACTTTGCTGTTaGTCTTACATAAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: DRTQHYCPPCPAANRPGALELCC*SYISSP
Trigger: AGGTGAGCTTATGTAAGATCAACAGCAAAGTTCTAA...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR TCA 90 bp GGGACAACAACAACCCATCTTCCAGCAGCAGTTCAGTGCTCATCTGTGCCATATGTCAGGTGCCTCTTTTaGCTATTCATGGACAATACC +
Preference number: 4 (lower is better)
Translates to: GTTTTHLPAAVQCSSVPYVRCLF*LFMDNT
Trigger: GGTATTGTCCATGAATAGTCAAAAGAGGCACCTGAC...ATATGGCACAGATGAGCACTGAACTGCTGCTGGAAGATGGGTTGTTGTTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581267.1
CDS-3UTR TCA 90 bp GGAACTGCAGCAGCTTCAGAGTCCAAGTCAGGTGCCTCTTTTGACTATTCATGGGTCAGGTGCCTCTTTTaGCTATTCATGGACAATACC +
Preference number: 4 (lower is better)
Translates to: GTAAASESKSGASFDYSWVRCLF*LFMDNT
Trigger: GGTATTGTCCATGAATAGTCAAAAGAGGCACCTGAC...CCATGAATAGTCAAAAGAGGCACCTGACTTGGACTCTGAAGCTGCTGCAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581267.1
ENST00000583403.5
CDS-3UTR TCA 90 bp CTCAGAGGTATCCACCTTGAGAACCATGATGTTTATAGCATCTACATGAATGGACTTCGAAGGGGCAGCTaGTCCTCATCACGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: LRGIHLENHDVYSIYMNGLRRGS*SSSRWY
Trigger: GTACCACCGTGATGAGGATCAGCTGCCCCTTCGAAG...TCCATTCATGTAGATGCTATAAACATCATGGTTCTCAAGGTGGATACCTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR TCA 90 bp ATGGACAATACCACGCTTGTGTTCTCCATCTTAACCTTGACCTGGTCTGGCAGCAGACCATATGGGGCATaGGCAAAGAGAGTATCTAGT +
Preference number: 4 (lower is better)
Translates to: MDNTTLVFSILTLTWSGSRPYGA*AKRVSS
Trigger: ACTAGATACTCTCTTTGCTCATGCCCCATATGGTCT...GCTGCCAGACCAGGTCAAGGTTAAGATGGAGAACACAAGCGTGGTATTGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR GCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATATGATAGAATACATCTaGTTCTCCAGCTGTCGTATT +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNMIEYI*FSSCRI
Trigger: AATACGACAGCTGGAGAAGCAGATGTATTCTATCAT...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGTTCTTGCTGTCATCCTaGAAAGACTTCATGATAGAA +
Preference number: 4 (lower is better)
Translates to: TELSITVHHALQRTDQVLFLLSS*KDFMIE
Trigger: TTCTATCATGAAGTCTTTGCAGGATGACAGCAAGAA...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR GCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATACATTTACCTCAAAATaGTCCTTAACAGAGATACCC +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNTFTSK*SLTEIP
Trigger: GGGTATCTCTGTTAAGGAGCATTTTGAGGTAAATGT...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp TTGCTGTTGATCTTACATAAGCTCACCTCACAGATTAGCCTTTTCCCATCACTATCCGCTGACACCACTTaGTGGCCAACCGGACCACAA +
Preference number: 4 (lower is better)
Translates to: LLLILHKLTSQISLFPSLSADTT*WPTGPQ
Trigger: TTGTGGTCCGGTTGGCCACCAAGTGGTGTCAGCGGA...TAGTGATGGGAAAAGGCTAATCTGTGAGGTGAGCTTATGTAAGATCAACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR CCA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCACACAGTGGAACCTGTaGAATCTTTATGTAGATGAA +
Preference number: 4 (lower is better)
Translates to: ITVHHALQRTDQVLKSDATQWNL*NLYVDE
Trigger: TTCATCTACATAAAGATTCCACAGGTTCCACTGTGT...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATACACAGTGGAACCTGTaGAATCTTTATGTAGATGAA +
Preference number: 4 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNTQWNL*NLYVDE
Trigger: TTCATCTACATAAAGATTCCACAGGTTCCACTGTGT...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CCA 90 bp CCGACCCATGAACCTTCCAGCAGCAGTTCAGTGCTCATCTGTGCCATATCAGAGTCAAAACTTGTGAGCTaGGGCTATTTTCTCTCAGTA +
Preference number: 4 (lower is better)
Translates to: PTHEPSSSSSVLICAISESKLVS*GYFLSV
Trigger: TACTGAGAGAAAATAGCCCCAGCTCACAAGTTTTGA...CTCTGATATGGCACAGATGAGCACTGAACTGCTGCTGGAAGGTTCATGGGTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR TCA 90 bp GGTACAGGAACTGCAGCAGCTTCAGAGTCCAAGTCAGGTGCCTCTTTTGACTATTCAATAAGGATGGGCTaGAGGACAGTTCCTTTTGAT +
Preference number: 4 (lower is better)
Translates to: GTGTAAASESKSGASFDYSIRMG*RTVPFD
Trigger: ATCAAAAGGAACTGTCCTTCAGCCCATCCTTATTGA...ATAGTCAAAAGAGGCACCTGACTTGGACTCTGAAGCTGCTGCAGTTCCTGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR TCA 90 bp TGCCATAAGGACTCAGAGGTATCCACCTTGAGAACCATGATGTTTATAGCATCTGTTTTCTGTCACCTCTaGACAGGGAACAGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: CHKDSEVSTLRTMMFIASVFCHL*TGNRLR
Trigger: TCTAAGCCTGTTCCCTGTTCAGAGGTGACAGAAAAC...AGATGCTATAAACATCATGGTTCTCAAGGTGGATACCTCTGAGTCCTTATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR TCA 90 bp GTATGTTCCCTCCTTCCACTCCCCAGTTACACTGAGATTAGATTAAGGAGACCATTAGAACTTTGCTGTTaGTCTTACATAAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: VCSLLPLPSYTEIRLRRPLELCC*SYISSP
Trigger: AGGTGAGCTTATGTAAGATCAACAGCAAAGTTCTAA...TGGTCTCCTTAATCTAATCTCAGTGTAACTGGGGAGTGGAAGGAGGGAACATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR CCA 90 bp ATATGCCATAAGGACTCAGAGGTATCCACCTTGAGAACCATGATGTTTATAGCATCTTTTGACTATTCATaGACAATACCACGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: ICHKDSEVSTLRTMMFIASFDYS*TIPRLC
Trigger: ACACAAGCGTGGTATTGTCCATGAATAGTCAAAAGA...TGCTATAAACATCATGGTTCTCAAGGTGGATACCTCTGAGTCCTTATGGCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS CCA 90 bp AGCCAATCTTTAGCTCCGCCTGCAGCTTCCGCTGACACCACTTGGTaGCCAACCGGACCACAAGCCACCTGGGCTGGCGGTGGACCTGGC +
Preference number: 5 (lower is better)
Translates to: SQSLAPPAASADTTW*PTGPQATWAGGGPG
Trigger: GCCAGGTCCACCGCCAGCCCAGGTGGCTTGTGGTCCGGTTGGCCACCAAGTGGTGTCAGCGGAAGCTGCAGGCGGAGCTAAAGATTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389003.7
ENST00000544884.5
CDS TCA 90 bp GCTGGCCCAAGGGCACCTCAGGCAGGAACTCTGGGGCCCGCAGAGTaGCACTATGGTGATCATGGGGGTTCCCATGGCACAGCCACTGCA +
Preference number: 5 (lower is better)
Translates to: AGPRAPQAGTLGPAE*HYGDHGGSHGTATA
Trigger: TGCAGTGGCTGTGCCATGGGAACCCCCATGATCACCATAGTGTCACTCTGCGGGCCCCAGAGTTCCTGCCTGAGGTGCCCTTGGGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000577261.1
ENST00000582417.1
CDS GCA 90 bp CATGCATATTGGGTGGGTGTGGCGCCCGCTGAATGTGGGAGTCACTaGCCACACGCCAGCAGAGGTGGTCCACAGTTAGGACGCCCCGCT +
Preference number: 5 (lower is better)
Translates to: HAYWVGVAPAECGSH*PHASRGGPQLGRPA
Trigger: AGCGGGGCGTCCTAACTGTGGACCACCTCTGCTGGCGTGTGGGCAGTGACTCCCACATTCAGCGGGCGCCACACCCACCCAATATGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 90 bp AGGAGCCAATCTTTAGCTCCGCCTGCAGCTTCCGCTGACACCACTTaGTGGCCAACCGGACCACAAGCCACCTGGGCTGGCGGTGGACCT +
Preference number: 5 (lower is better)
Translates to: RSQSLAPPAASADTT*WPTGPQATWAGGGP
Trigger: AGGTCCACCGCCAGCCCAGGTGGCTTGTGGTCCGGTTGGCCACCAAGTGGTGTCAGCGGAAGCTGCAGGCGGAGCTAAAGATTGGCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389003.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTGGAGTGGGACAGGGCTaGGAGAGGCCCAAGCACGAG +
Preference number: 5 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPGVGQG*ERPKHE
Trigger: CTCGTGCTTGGGCCTCTCCAAGCCCTGTCCCACTCC...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 90 bp GGCACCTCAGGCAGGAACTCTGGGGCCCGCAGAGTGACACTATGGTaGTCATGGGGGTTCCCATGGCACAGCCACTGCAGGTCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: GTSGRNSGARRVTLW*SWGFPWHSHCRSSV
Trigger: GACACTGGACCTGCAGTGGCTGTGCCATGGGAACCCCCATGATCACCATAGTGTCACTCTGCGGGCCCCAGAGTTCCTGCCTGAGGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000577261.1
ENST00000582417.1
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGGGAGTGGGACAGGGCTaGGAGAGGCCCAAGCACGAG +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGGVGQG*ERPKHE
Trigger: CTCGTGCTTGGGCCTCTCCAAGCCCTGTCCCACTCC...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACGGAGTGGGACAGGGCTaGGAGAGGCCCAAGCACGAG +
Preference number: 5 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHGVGQG*ERPKHE
Trigger: CTCGTGCTTGGGCCTCTCCAAGCCCTGTCCCACTCC...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACACTGGACTTGCTGGGCTaGCTGTGCCTCAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTLDLLG*LCLSWL
Trigger: CAGCCAGCTGAGGCACAGCAAGCCCAGCAAGTCCAG...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 90 bp AGTGCCTCACCCCAAACATGCATATTGGGTGGGTGTGGCGCCCGCTaGATGTGGGAGTCACTGCCCACACGCCAGCAGAGGTGGTCCACA +
Preference number: 5 (lower is better)
Translates to: SASPQTCILGGCGAR*MWESLPTRQQRWST
Trigger: TGTGGACCACCTCTGCTGGCGTGTGGGCAGTGACTCCCACATTCAGCGGGCGCCACACCCACCCAATATGCATGTTTGGGGTGAGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 90 bp GAGACTGAGCCGAAAGAGAGGAGCCAAACACGGTTCCGGAGGGTCTaGAGCGCAGGGAAGGGGTTCCGGTGGAGGATCATCTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: ETEPKERSQTRFRRV*SAGKGFRWRIISSS
Trigger: GCTGGAAGAGATGATCCTCCACCGGAACCCCTTCCCTGCGCTGCAGACCCTCCGGAACCGTGTTTGGCTCCTCTCTTTCGGCTCAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAACCCCAAACATGCATATaGGGTGGGTGTGGCGCCCGC +
Preference number: 5 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQPQTCI*GGCGAR
Trigger: GCGGGCGCCACACCCACCCAATATGCATGTTTGGGG...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGGGTTTAGCAGCCGCTTaGGGGGTAATGGCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: THKSSWITGSPSHPTSPWGLAAA*GVMAQG
Trigger: CCCCTGAGCCATTACCCCCAAAGCGGCTGCTAAACC...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCTGGACTTGCTGGGCTaGCTGTGCCTCAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHLDLLG*LCLSWL
Trigger: CAGCCAGCTGAGGCACAGCAAGCCCAGCAAGTCCAG...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGACAGGGGGCCGAACTTaGCTGAAGAGGCGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLTGGRT*LKRRRA
Trigger: AGCTCTCCGCCTCTTCAGCAAAGTTCGGCCCCCTGT...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTCCTGCCCTGGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCGGGTGCTCTGGCGATTaGCGAAATGACCTTCTGACC +
Preference number: 5 (lower is better)
Translates to: VLPWAHSLGLALLLPLWPGCSGD*RNDLLT
Trigger: GGTCAGAAGGTCATTTCGCAAATCGCCAGAGCACCC...GGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCCAGGGCAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS TCA 90 bp AAAAAGCGGAAGGAGCCAATCTTTAGCTCCGCCTGCAGCTTCCGCTaGCACCACTTGGTGGCCAACCGGACCACAAGCCACCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: KKRKEPIFSSACSFR*HHLVANRTTSHLGW
Trigger: CCAGCCCAGGTGGCTTGTGGTCCGGTTGGCCACCAAGTGGTGTCAGCGGAAGCTGCAGGCGGAGCTAAAGATTGGCTCCTTCCGCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389003.7
ENST00000544884.5
CDS GCA 90 bp GCAAGATCTGACGCCGACGGGAGCAAGGCTGACCACTCTGCTCGGTaGCCACAAGTCGACCCATTAGCCGCCAGTCACGGATCTCAAACA +
Preference number: 5 (lower is better)
Translates to: ARSDADGSKADHSAR*PQVDPLAASHGSQT
Trigger: TGTTTGAGATCCGTGACTGGCGGCTAATGGGTCGACTTGTGGGCACCGAGCAGAGTGGTCAGCCTTGCTCCCGTCGGCGTCAGATCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000581064.1
CDS GCA 90 bp GTGGTAACCATGCCGCCCACTGCCTGCCCACTCTCCATCAGCTCCTaGACAGAGTCCAGACTACGCTGCCGGTGCTCCTCGATATTCTTC +
Preference number: 5 (lower is better)
Translates to: VVTMPPTACPLSISS*TESRLRCRCSSIFF
Trigger: GAAGAATATCGAGGAGCACCGGCAGCGTAGTCTGGACTCTGTGCAGGAGCTGATGGAGAGTGGGCAGGCAGTGGGCGGCATGGTTACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCGGGATGTCAGGGGCCTaGCAACAGGGTTGCATCTTC +
Preference number: 5 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPGMSGA*QQGCIF
Trigger: GAAGATGCAACCCTGTTGCAAGGCCCCTGACATCCC...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCGGTTTAGCAGCCGCTTaGGGGGTAATGGCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLGLAAA*GVMAQG
Trigger: CCCCTGAGCCATTACCCCCAAAGCGGCTGCTAAACC...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGGGGTCAGCTGAGGGCTaGGTCAAGAGGTCCACACAC +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGGSAEG*VKRSTH
Trigger: GTGTGTGGACCTCTTGACCAAGCCCTCAGCTGACCC...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACGGGTCAGCTGAGGGCTaGGTCAAGAGGTCCACACAC +
Preference number: 5 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHGSAEG*VKRSTH
Trigger: GTGTGTGGACCTCTTGACCAAGCCCTCAGCTGACCC...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCCTGGACTTGCTGGGCTaGCTGTGCCTCAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPLDLLG*LCLSWL
Trigger: CAGCCAGCTGAGGCACAGCAAGCCCAGCAAGTCCAG...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCTCCAGCTGTCGTATTaGGGCCACATGCTGCCGCAC +
Preference number: 5 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHLQLSY*GHMLPH
Trigger: GTGCGGCAGCATGTGGCCCAAATACGACAGCTGGAG...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTGGGCAACCAGGGCTTaGCGGCTGTCCCTTTTGACA +
Preference number: 5 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEWATRA*RLSLLT
Trigger: TGTCAAAAGGGACAGCCGCAAAGCCCTGGTTGCCCA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 90 bp AAAAAGCGGAAGGAGCCAATCTTTAGCTCCGCCTGCAGCTTCCGCTaGCACCACTTGGTGGCCAACCGGACCACAAGCCACCGGCCTAGA +
Preference number: 5 (lower is better)
Translates to: KKRKEPIFSSACSFR*HHLVANRTTSHRPR
Trigger: TCTAGGCCGGTGGCTTGTGGTCCGGTTGGCCACCAAGTGGTGTCAGCGGAAGCTGCAGGCGGAGCTAAAGATTGGCTCCTTCCGCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528896.7
ENST00000577417.5
ENST00000580882.5
ENST00000583403.5
CDS GCA 90 bp TCCTCAGTGGCCAGCTGGTGCAGGTTCGCCTGTTCAATGTCCATGTaGCAGTCTCCATGGAACAGAAGACGGCTCTTGTCCCACCAGGGC +
Preference number: 5 (lower is better)
Translates to: SSVASWCRFACSMSM*QSPWNRRRLLSHQG
Trigger: GCCCTGGTGGGACAAGAGCCGTCTTCTGTTCCATGGAGACTGGCACATGGACATTGAACAGGCGAACCTGCACCAGCTGGCCACTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 90 bp GCCTGCCCACTCTCCATCAGCTCCTGCACAGAGTCCAGACTACGCTaGCGGTGCTCCTCGATATTCTTCACCTCTAACCAGAGCTGTCGG +
Preference number: 5 (lower is better)
Translates to: ACPLSISSCTESRLR*RCSSIFFTSNQSCR
Trigger: CCGACAGCTCTGGTTAGAGGTGAAGAATATCGAGGAGCACCGGCAGCGTAGTCTGGACTCTGTGCAGGAGCTGATGGAGAGTGGGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCGAAGGACAGTTCCTTTaGATCCACCCCAGCGCTCTG +
Preference number: 5 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPEGQFL*IHPSAL
Trigger: CAGAGCGCTGGGGTGGATCAAAAGGAACTGTCCTTC...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAGAGGCAGACAATGCGTaGGCGACTCTGGGACAACAA +
Preference number: 5 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTEADNA*ATLGQQ
Trigger: TTGTTGTCCCAGAGTCGCCAACGCATTGTCTGCCTC...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTCTAGCCTTGAGGGAGTaGAGGCAGACAATGCGTTGG +
Preference number: 5 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPLALRE*RQTMRW
Trigger: CCAACGCATTGTCTGCCTCAACTCCCTCAAGGCTAG...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGACCTGCACACTAGCCTaGAGGGAGTTGAGGCAGACA +
Preference number: 5 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLTCTLA*RELRQT
Trigger: TGTCTGCCTCAACTCCCTCAAGGCTAGTGTGCAGGT...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGACCTGCACACTAGCCTaGAGGGAGTTGAGGCAGACA +
Preference number: 5 (lower is better)
Translates to: PQILVDNGKPLPPHKSLETCTLA*RELRQT
Trigger: TGTCTGCCTCAACTCCCTCAAGGCTAGTGTGCAGGT...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGACCTGCACACTAGCCTaGAGGGAGTTGAGGCAGACA +
Preference number: 5 (lower is better)
Translates to: THKSSWITGSPSHPTSPWTCTLA*RELRQT
Trigger: TGTCTGCCTCAACTCCCTCAAGGCTAGTGTGCAGGT...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCGCTGATGGATGCTTaGTGGCCTGAGGTGCTGGTA +
Preference number: 5 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHPLMDA*WPEVLV
Trigger: TACCAGCACCTCAGGCCACAAAGCATCCATCAGCGG...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCCCCAAACATGCATATaGGGTGGGTGTGGCGCCCGC +
Preference number: 5 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNPQTCI*GGCGAR
Trigger: GCGGGCGCCACACCCACCCAATATGCATGTTTGGGG...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGGGGATGTCAGGGGCCTaGCAACAGGGTTGCATCTTC +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGGMSGA*QQGCIF
Trigger: GAAGATGCAACCCTGTTGCAAGGCCCCTGACATCCC...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTACAAAAGCTGTGAGCTaGGCTGTGCTCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPTKAVS*AVLTSR
Trigger: CCTGGAGGTGAGCACAGCCAAGCTCACAGCTTTTGT...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACACCCCGCTTTGGCTTTTaGGCTGGCATCTGTGGATCA +
Preference number: 5 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTPRFGF*AGICGS
Trigger: TGATCCACAGATGCCAGCCAAAAAGCCAAAGCGGGG...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTTGGGACACCCCGCTTaGGCTTTTTGGCTGGCATCT +
Preference number: 5 (lower is better)
Translates to: PQILVDNGKPLPPHKSLELGHPA*AFWLAS
Trigger: AGATGCCAGCCAAAAAGCCAAAGCGGGGTGTCCCAA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAACTCCAGCTGTCGTATTaGGGCCACATGCTGCCGCAC +
Preference number: 5 (lower is better)
Translates to: HKSLEPEPESDPVLQPLELQLSY*GHMLPH
Trigger: GTGCGGCAGCATGTGGCCCAAATACGACAGCTGGAG...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTCTTTCCAGCTGCAGGTaGGCCTTCTCCTGGTTTAGC +
Preference number: 5 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPLSSCR*AFSWFS
Trigger: GCTAAACCAGGAGAAGGCCAACCTGCAGCTGGAAAG...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTTTTCGCAGCTCCATCTaGTTAGCCCGCTGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPFRSSI*LARCSW
Trigger: CCAACTGCAGCGGGCTAACAAGATGGAGCTGCGAAA...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAACAGGGGGCCGAACTTaGCTGAAGAGGCGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: HKSLEPEPESDPVLQPLETGGRT*LKRRRA
Trigger: AGCTCTCCGCCTCTTCAGCAAAGTTCGGCCCCCTGT...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTGGGTGCTCTGGCGATTaGCGAAATGACCTTCTGACC +
Preference number: 5 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPGCSGD*RNDLLT
Trigger: GGTCAGAAGGTCATTTCGCAAATCGCCAGAGCACCC...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGGGGTGCTCTGGCGATTaGCGAAATGACCTTCTGACC +
Preference number: 5 (lower is better)
Translates to: THKSSWITGSPSHPTSPWGCSGD*RNDLLT
Trigger: GGTCAGAAGGTCATTTCGCAAATCGCCAGAGCACCC...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCTGGGCAACCAGGGCTTaGCGGCTGTCCCTTTTGACA +
Preference number: 5 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLWATRA*RLSLLT
Trigger: TGTCAAAAGGGACAGCCGCAAAGCCCTGGTTGCCCA...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTCCTGCCCTGGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTTCTTGCCAGGGTTCTaGTCGCCCACACTTAAACCA +
Preference number: 5 (lower is better)
Translates to: VLPWAHSLGLALLLPLWPFLPGF*SPTLKP
Trigger: TGGTTTAAGTGTGGGCGACAAGAACCCTGGCAAGAA...GGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCCAGGGCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CAA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACACCCATTCCCTGGGTCTaGCTCTCTTGTTGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTPIPWV*LSCCLS
Trigger: AGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGG...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS GCA 90 bp AAGCCAGCAGCCAGCTCTGGACAGTATGCCTGCAGGGAACCTCCATaGCGGCTCAGTGACACACTCTCTGCAGCCAGGGTAATGAACTTG +
Preference number: 5 (lower is better)
Translates to: KPAASSGQYACREPP*RLSDTLSAARVMNL
Trigger: CAAGTTCATTACCCTGGCTGCAGAGAGTGTGTCACTGAGCCGGCATGGAGGTTCCCTGCAGGCATACTGTCCAGAGCTGGCTGCTGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 90 bp AACTCAGTGGCCAGCTGGTGCAGGTTCGCCTGTTCAATGTCCATGTaGCAGTCTCCATGGAACAGAAGACGGCTCTTGTCCCACCAGGGC +
Preference number: 5 (lower is better)
Translates to: NSVASWCRFACSMSM*QSPWNRRRLLSHQG
Trigger: GCCCTGGTGGGACAAGAGCCGTCTTCTGTTCCATGGAGACTGGCACATGGACATTGAACAGGCGAACCTGCACCAGCTGGCCACTGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577261.1
CDS-3UTR CAA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACGAGGCAGACAATGCGTaGGCGACTCTGGGACAACAA +
Preference number: 5 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHEADNA*ATLGQQ
Trigger: TTGTTGTCCCAGAGTCGCCAACGCATTGTCTGCCTC...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTAGCCTTGAGGGAGTaGAGGCAGACAATGCGTTGG +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGLALRE*RQTMRW
Trigger: CCAACGCATTGTCTGCCTCAACTCCCTCAAGGCTAG...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCTAGCCTTGAGGGAGTaGAGGCAGACAATGCGTTGG +
Preference number: 5 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHLALRE*RQTMRW
Trigger: CCAACGCATTGTCTGCCTCAACTCCCTCAAGGCTAG...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAACCGCTGATGGATGCTTaGTGGCCTGAGGTGCTGGTA +
Preference number: 5 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEPLMDA*WPEVLV
Trigger: TACCAGCACCTCAGGCCACAAAGCATCCATCAGCGG...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGACAAAAGCTGTGAGCTaGGCTGTGCTCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGTKAVS*AVLTSR
Trigger: CCTGGAGGTGAGCACAGCCAAGCTCACAGCTTTTGT...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATGGGTCAGCTGAGGGCTaGGTCAAGAGGTCCACACAC +
Preference number: 5 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNGSAEG*VKRSTH
Trigger: GTGTGTGGACCTCTTGACCAAGCCCTCAGCTGACCC...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAAACAGAAGACGGCTCTaGTCCCACCAGGGCAAAGGT +
Preference number: 5 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQNRRRL*SHQGKG
Trigger: ACCTTTGCCCTGGTGGGACAAGAGCCGTCTTCTGTT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCAACAGAAGACGGCTCTaGTCCCACCAGGGCAAAGGT +
Preference number: 5 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLNRRRL*SHQGKG
Trigger: ACCTTTGCCCTGGTGGGACAAGAGCCGTCTTCTGTT...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTAGTTGCCCAGAAGTTTaGCATCCAGCGCAGGGTACT +
Preference number: 5 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPSCPEV*HPAQGT
Trigger: AGTACCCTGCGCTGGATGCAAAACTTCTGGGCAACT...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGCATCACTGTGCCTGCTaGAGGTATAAGCCGCTGAGT +
Preference number: 5 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLHHCAC*RYKPLS
Trigger: ACTCAGCGGCTTATACCTCAAGCAGGCACAGTGATG...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGGCGATTGCTATGCCGTaGGTAGGTGAGGGAGGACAA +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGAIAMP*VGEGGQ
Trigger: TTGTCCTCCCTCACCTACCAACGGCATAGCAATCGC...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCCCCGCTTTGGCTTTTaGGCTGGCATCTGTGGATCA +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGPRFGF*AGICGS
Trigger: TGATCCACAGATGCCAGCCAAAAAGCCAAAGCGGGG...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGTTGGGACACCCCGCTTaGGCTTTTTGGCTGGCATCT +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGLGHPA*AFWLAS
Trigger: AGATGCCAGCCAAAAAGCCAAAGCGGGGTGTCCCAA...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACTTGGGACACCCCGCTTaGGCTTTTTGGCTGGCATCT +
Preference number: 5 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHLGHPA*AFWLAS
Trigger: AGATGCCAGCCAAAAAGCCAAAGCGGGGTGTCCCAA...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTTGCAGCAGTTGGGCTTaGGCAGCTGACACAATGACA +
Preference number: 5 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPCSSWA*AADTMT
Trigger: TGTCATTGTGTCAGCTGCCAAAGCCCAACTGCTGCA...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCCTCCAGCTGTCGTATTaGGGCCACATGCTGCCGCAC +
Preference number: 5 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCLQLSY*GHMLPH
Trigger: GTGCGGCAGCATGTGGCCCAAATACGACAGCTGGAG...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGTTTCGCAGCTCCATCTaGTTAGCCCGCTGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGFRSSI*LARCSW
Trigger: CCAACTGCAGCGGGCTAACAAGATGGAGCTGCGAAA...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAATTTCGCAGCTCCATCTaGTTAGCCCGCTGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQFRSSI*LARCSW
Trigger: CCAACTGCAGCGGGCTAACAAGATGGAGCTGCGAAA...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGACAGGGGGCCGAACTTaGCTGAAGAGGCGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: ETELSITVHHALQRTDQVTGGRT*LKRRRA
Trigger: AGCTCTCCGCCTCTTCAGCAAAGTTCGGCCCCCTGT...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGGTACTGCATCATCTGTaGCAATCAGCTGCCGAGGCT +
Preference number: 5 (lower is better)
Translates to: THKSSWITGSPSHPTSPWVLHHL*QSAAEA
Trigger: AGCCTCGGCAGCTGATTGCAACAGATGATGCAGTAC...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCATGTCCATGTGTTGTaGTGGTACTCCAGACAGGGC +
Preference number: 5 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEHVHVL*WYSRQG
Trigger: GCCCTGTCTGGAGTACCACAACAACACATGGACATG...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 90 bp CAGCTCTGGACAGTATGCCTGCAGGGAACCTCCATGCCGGCTCAGTaGCACACTCTCTGCAGCCAGGGTAATGAACTTGTCCTCAGCTAC +
Preference number: 5 (lower is better)
Translates to: QLWTVCLQGTSMPAQ*HTLCSQGNELVLSY
Trigger: GTAGCTGAGGACAAGTTCATTACCCTGGCTGCAGAGAGTGTGTCACTGAGCCGGCATGGAGGTTCCCTGCAGGCATACTGTCCAGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 90 bp GCAGTTGCAACGCGAAATGATCCGCTGGACTTGCTGGGCTTGCTGTaGCTCAGCTGGCTGGTTCCAATCTGTGGTTGTGGTAACCATGCC +
Preference number: 5 (lower is better)
Translates to: AVATRNDPLDLLGLL*LSWLVPICGCGNHA
Trigger: GGCATGGTTACCACAACCACAGATTGGAACCAGCCAGCTGAGGCACAGCAAGCCCAGCAAGTCCAGCGGATCATTTCGCGTTGCAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 90 bp CTGTGCCACACCCTTCCCAGGGCCCAGTGGTACTGCATCATCTGTTaGAATCAGCTGCCGAGGCTTCACCACTGGTATTCCAGTAGTCAC +
Preference number: 5 (lower is better)
Translates to: LCHTLPRAQWYCIIC*NQLPRLHHWYSSSH
Trigger: GTGACTACTGGAATACCAGTGGTGAAGCCTCGGCAGCTGATTGCAACAGATGATGCAGTACCACTGGGCCCTGGGAAGGGTGTGGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000583860.1
CDS GCA 90 bp CACCCCACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTaGAGCCACTCGAATCGCCAAATCATTTGCGCCTGCCAAAGATGG +
Preference number: 5 (lower is better)
Translates to: HPTSPWSLSQSQILY*SHSNRQIICACQRW
Trigger: CCATCTTTGGCAGGCGCAAATGATTTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 90 bp ACCAGAGCTGTCGGCCATCCTGCTCTGTGGGGCTGCTTTCAGTGGTaGCAAAGTACTGCATGCCATCCAAGAGGCAAGTCCAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: TRAVGHPALWGCFQW*QSTACHPRGKSRMS
Trigger: AGACATCCTGGACTTGCCTCTTGGATGGCATGCAGTACTTTGCCACCACTGAAAGCAGCCCCACAGAGCAGGATGGCCGACAGCTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAGAAGGACAGTTCCTTTaGATCCACCCCAGCGCTCTG +
Preference number: 5 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEEGQFL*IHPSAL
Trigger: CAGAGCGCTGGGGTGGATCAAAAGGAACTGTCCTTC...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GGTCACCTGCACACTAGCCTTGAGGGAGTTGAGGCAGACAATGCGTTGGCGACTGAGGCAGACAATGCGTaGGCGACTCTGGGACAACAA +
Preference number: 5 (lower is better)
Translates to: GHLHTSLEGVEADNALATEADNA*ATLGQQ
Trigger: TTGTTGTCCCAGAGTCGCCAACGCATTGTCTGCCTC...AGTCGCCAACGCATTGTCTGCCTCAACTCCCTCAAGGCTAGTGTGCAGGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581267.1
CDS-3UTR CAA 90 bp GCTTCGAAGGGGCAGCTGATCCTCATCACGGTGGTACAGGAACTGCAGCAGCTTCTAGCCTTGAGGGAGTaGAGGCAGACAATGCGTTGG +
Preference number: 5 (lower is better)
Translates to: ASKGQLILITVVQELQQLLALRE*RQTMRW
Trigger: CCAACGCATTGTCTGCCTCAACTCCCTCAAGGCTAG...AAGCTGCTGCAGTTCCTGTACCACCGTGATGAGGATCAGCTGCCCCTTCGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581267.1
CDS-3UTR CAA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCCCGCTGATGGATGCTTaGTGGCCTGAGGTGCTGGTA +
Preference number: 5 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCPLMDA*WPEVLV
Trigger: TACCAGCACCTCAGGCCACAAAGCATCCATCAGCGG...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGGGGATGTCAGGGGCCTaGCAACAGGGTTGCATCTTC +
Preference number: 5 (lower is better)
Translates to: ETELSITVHHALQRTDQVGMSGA*QQGCIF
Trigger: GAAGATGCAACCCTGTTGCAAGGCCCCTGACATCCC...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTCCTGCCCTGGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCCGAACCAGAAAGCTCTaGACATTGCACTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: VLPWAHSLGLALLLPLWPRTRKL*TLHLSI
Trigger: AATGCTCAAGTGCAATGTCAAGAGCTTTCTGGTTCG...GGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCCAGGGCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CAA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGGCTGTTCTCACGTaGATATCCAAGTCACCCTTG +
Preference number: 5 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLEAVLT*ISKSPL
Trigger: CAAGGGTGACTTGGATATCAACGTGAGAACAGCCTC...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGAGTTGCCCAGAAGTTTaGCATCCAGCGCAGGGTACT +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGSCPEV*HPAQGT
Trigger: AGTACCCTGCGCTGGATGCAAAACTTCTGGGCAACT...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCCTGGGTTTCAGGTTATaGAAGAGCTTTCCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPLGFRL*KSFPLQ
Trigger: CTGCAGGGGAAAGCTCTTCAATAACCTGAAACCCAG...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGCTGGGTTTCAGGTTATaGAAGAGCTTTCCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLLGFRL*KSFPLQ
Trigger: CTGCAGGGGAAAGCTCTTCAATAACCTGAAACCCAG...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTCAGCAGGTGGGTCTTaGTTACCAAGGGATCAAGAC +
Preference number: 5 (lower is better)
Translates to: PQILVDNGKPLPPHKSLESAGGS*LPRDQD
Trigger: GTCTTGATCCCTTGGTAACAAAGACCCACCTGCTGA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTCAGCAGGTGGGTCTTaGTTACCAAGGGATCAAGAC +
Preference number: 5 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPSAGGS*LPRDQD
Trigger: GTCTTGATCCCTTGGTAACAAAGACCCACCTGCTGA...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTACATGGAGCAGCAGGTaGTTGACAATGTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPTWSSR*LTMSRI
Trigger: GATCCTGGACATTGTCAACAACCTGCTGCTCCATGT...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCCTGGAACCTGACCCGTaGCTTCTTCTCACTATGTTC +
Preference number: 5 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPLEPDP*LLLTMF
Trigger: GAACATAGTGAGAAGAAGCAACGGGTCAGGTTCCAG...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCAGTATGCTGCTGCGTaGCTCCTCTGGATTGCTAGA +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGQYAAA*LLWIAR
Trigger: TCTAGCAATCCAGAGGAGCAACGCAGCAGCATACTG...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAACAGTATGCTGCTGCGTaGCTCCTCTGGATTGCTAGA +
Preference number: 5 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQQYAAA*LLWIAR
Trigger: TCTAGCAATCCAGAGGAGCAACGCAGCAGCATACTG...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCGCATTGGGGAGGAGGTaGTTCATGGTAAACCAGCCC +
Preference number: 5 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPALGRR*FMVNQP
Trigger: GGGCTGGTTTACCATGAACAACCTCCTCCCCAATGC...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGGTACTGCATCATCTGTaGCAATCAGCTGCCGAGGCT +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGVLHHL*QSAAEA
Trigger: AGCCTCGGCAGCTGATTGCAACAGATGATGCAGTAC...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATGCTCGCTCTTTCATCTaGTCAATGTCATCCACAGGG +
Preference number: 5 (lower is better)
Translates to: GPIPWVLLSCCLSGPEPDARSFI*SMSSTG
Trigger: CCCTGTGGATGACATTGACAAGATGAAAGAGCGAGC...ATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CAA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTGCTCGCTCTTTCATCTaGTCAATGTCATCCACAGGG +
Preference number: 5 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPARSFI*SMSSTG
Trigger: CCCTGTGGATGACATTGACAAGATGAAAGAGCGAGC...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCCATGTCCATGTGTTGTaGTGGTACTCCAGACAGGGC +
Preference number: 5 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLHVHVL*WYSRQG
Trigger: GCCCTGTCTGGAGTACCACAACAACACATGGACATG...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATTGGGCAACCAGGGCTTaGCGGCTGTCCCTTTTGACA +
Preference number: 5 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNWATRA*RLSLLT
Trigger: TGTCAAAAGGGACAGCCGCAAAGCCCTGGTTGCCCA...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTAGCCTTAGCTTCTCTTaGATTACCTGGGCAACCAGG +
Preference number: 5 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPSLSFS*ITWATR
Trigger: CCTGGTTGCCCAGGTAATCAAAGAGAAGCTAAGGCT...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCCTCCTCTTCCTGCTGTaGCATGTTCAGGTCCGATTT +
Preference number: 5 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPLLFLL*HVQVRF
Trigger: AAATCGGACCTGAACATGCAACAGCAGGAAGAGGAG...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCTCCTCTTCCTGCTGTaGCATGTTCAGGTCCGATTT +
Preference number: 5 (lower is better)
Translates to: PQILVDNGKPLPPHKSLELLFLL*HVQVRF
Trigger: AAATCGGACCTGAACATGCAACAGCAGGAAGAGGAG...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGTTCTTGCCAGGGTTCTaGTCGCCCACACTTAAACCA +
Preference number: 5 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLFLPGF*SPTLKP
Trigger: TGGTTTAAGTGTGGGCGACAAGAACCCTGGCAAGAA...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTTCTTGCCAGGGTTCTaGTCGCCCACACTTAAACCA +
Preference number: 5 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEFLPGF*SPTLKP
Trigger: TGGTTTAAGTGTGGGCGACAAGAACCCTGGCAAGAA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGGAATCGCCAAATCATTaGCGCCTGCCAAAGATGGAC +
Preference number: 5 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEESPNH*RLPKMD
Trigger: GTCCATCTTTGGCAGGCGCAAATGATTTGGCGATTC...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 90 bp CAGAGAGCTCCTCCTCAGCTGTGCGATTGCTATGCCGTTGGTAGGTaGGGGAGGACAAGCTCAGCAGGTGGGTCTTTGTTACCAAGGGAT +
Preference number: 5 (lower is better)
Translates to: QRAPPQLCDCYAVGR*GRTSSAGGSLLPRD
Trigger: ATCCCTTGGTAACAAAGACCCACCTGCTGAGCTTGTCCTCCCTCACCTACCAACGGCATAGCAATCGCACAGCTGAGGAGGAGCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 90 bp CAATGTCATCCACAGGGTGCTCTGGCGATTTGCGAAATGACCTTCTaGCCCCAGAACTCCGAGTCAAACCCTGTGCCACACCCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: QCHPQGALAICEMTF*PQNSESNPVPHPSQ
Trigger: CTGGGAAGGGTGTGGCACAGGGTTTGACTCGGAGTTCTGGGGTCAGAAGGTCATTTCGCAAATCGCCAGAGCACCCTGTGGATGACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 90 bp TCAGGGGCATGTTTGGTACCTCTGGCGATTTGCGAAATGACCTTCTaGCCCCAGAACTCCGAGTCAAACCCTGTGCCACACCCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: SGACLVPLAICEMTF*PQNSESNPVPHPSQ
Trigger: CTGGGAAGGGTGTGGCACAGGGTTTGACTCGGAGTTCTGGGGTCAGAAGGTCATTTCGCAAATCGCCAGAGGTACCAAACATGCCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583860.1
CDS GCA 90 bp AGGCTGAGCACTGGGGTAGGGATGTCAGGGGCCTTGCAACAGGGTTaGATCTTCTCCGTGACTGATTTCACCAGCGCTAACACAAGTCCT +
Preference number: 5 (lower is better)
Translates to: RLSTGVGMSGALQQG*IFSVTDFTSANTSP
Trigger: AGGACTTGTGTTAGCGCTGGTGAAATCAGTCACGGAGAAGATGCAACCCTGTTGCAAGGCCCCTGACATCCCTACCCCAGTGCTCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 90 bp ATTCGGCAGTTGCAACGCGAAATGATCCGCTGGACTTGCTGGGCTTaGTGTGCCTCAGCTGGCTGGTTCCAATCTGTGGTTGTGGTAACC +
Preference number: 5 (lower is better)
Translates to: IRQLQREMIRWTCWA*CASAGWFQSVVVVT
Trigger: GGTTACCACAACCACAGATTGGAACCAGCCAGCTGAGGCACAGCAAGCCCAGCAAGTCCAGCGGATCATTTCGCGTTGCAACTGCCGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 90 bp ACATGCTGCCGCACAGCCTCCTGCAAATGCAGTATGCTGCTGCGTTaGTCCTCTGGATTGCTAGAGATCTCAAGCTGGAACCTGACCCGT +
Preference number: 5 (lower is better)
Translates to: TCCRTASCKCSMLLR*SSGLLEISSWNLTR
Trigger: ACGGGTCAGGTTCCAGCTTGAGATCTCTAGCAATCCAGAGGAGCAACGCAGCAGCATACTGCATTTGCAGGAGGCTGTGCGGCAGCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS GCA 90 bp TTCTCCAGCTGTCGTATTTGGGCCACATGCTGCCGCACAGCCTCCTaGAAATGCAGTATGCTGCTGCGTTGCTCCTCTGGATTGCTAGAG +
Preference number: 5 (lower is better)
Translates to: FSSCRIWATCCRTAS*KCSMLLRCSSGLLE
Trigger: CTCTAGCAATCCAGAGGAGCAACGCAGCAGCATACTGCATTTGCAGGAGGCTGTGCGGCAGCATGTGGCCCAAATACGACAGCTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS GCA 90 bp CTTCCTCTGTCAGGCGCCACCGTGCCTGAGCAAAGTAAAACTCAGTaGGACGGACCACACTCACATCTTCTTGCTGCTTTCGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: LPLSGATVPEQSKTQ*DGPHSHLLAAFAAP
Trigger: TGGAGCTGCGAAAGCAGCAAGAAGATGTGAGTGTGGTCCGTCGCACTGAGTTTTACTTTGCTCAGGCACGGTGGCGCCTGACAGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000579924.6
ENST00000580395.1
CDS GCA 90 bp CCCTTCCCAGGGCCCAGTGGTACTGCATCATCTGTTGCAATCAGCTaGCGAGGCTTCACCACTGGTATTCCAGTAGTCACCAGTTTGGAC +
Preference number: 5 (lower is better)
Translates to: PFPGPSGTASSVAIS*RGFTTGIPVVTSLD
Trigger: GTCCAAACTGGTGACTACTGGAATACCAGTGGTGAAGCCTCGGCAGCTGATTGCAACAGATGATGCAGTACCACTGGGCCCTGGGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000583860.1
CDS CCA 90 bp GTCACCTGCACACTAGCCTTGAGGGAGTTGAGGCAGACAATGCGTTaGCGACTCTGGGACAACAACAACCCATCTGTAAGAGGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: VTCTLALRELRQTMR*RLWDNNNPSVRGQR
Trigger: CCTCTGGCCTCTTACAGATGGGTTGTTGTTGTCCCAGAGTCGCCAACGCATTGTCTGCCTCAACTCCCTCAAGGCTAGTGTGCAGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577417.5
CDS-3UTR CAA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGGAAGGACAGTTCCTTTaGATCCACCCCAGCGCTCTG +
Preference number: 5 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEEGQFL*IHPSAL
Trigger: CAGAGCGCTGGGGTGGATCAAAAGGAACTGTCCTTC...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTTCTCCATCTTAACCTaGACCTGGTCTGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPFSILT*TWSGSC
Trigger: GCAGCTGCCAGACCAGGTCAAGGTTAAGATGGAGAA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp AAGGGGCAGCTGATCCTCATCACGGTGGTACAGGAACTGCAGCAGCTTCAGAGTACCTGCACACTAGCCTaGAGGGAGTTGAGGCAGACA +
Preference number: 5 (lower is better)
Translates to: KGQLILITVVQELQQLQSTCTLA*RELRQT
Trigger: TGTCTGCCTCAACTCCCTCAAGGCTAGTGTGCAGGT...ACTCTGAAGCTGCTGCAGTTCCTGTACCACCGTGATGAGGATCAGCTGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581267.1
CDS-3UTR CAA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATACAAAAGCTGTGAGCTaGGCTGTGCTCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNTKAVS*AVLTSR
Trigger: CCTGGAGGTGAGCACAGCCAAGCTCACAGCTTTTGT...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGCCAGGGTAATGAACTaGTCCTCAGCTACAAAAGCT +
Preference number: 5 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLARVMN*SSATKA
Trigger: AGCTTTTGTAGCTGAGGACAAGTTCATTACCCTGGC...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CATGACAGTGGAGTGAGGATCAGAGGATCAGCCCCCTCCCGTTTCCTGGCACAGGCCTGGATCAAGCTCTaGAACCTGTTCTACCACATG +
Preference number: 5 (lower is better)
Translates to: HDSGVRIRGSAPSRFLAQAWIKL*NLFYHM
Trigger: CATGTGGTAGAACAGGTTCAAGAGCTTGATCCAGGC...CTGTGCCAGGAAACGGGAGGGGGCTGATCCTCTGATCCTCACTCCACTGTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGGCCTGGATCAAGCTCTaGAACCTGTTCTACCACATG +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGAWIKL*NLFYHM
Trigger: CATGTGGTAGAACAGGTTCAAGAGCTTGATCCAGGC...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGAACAGAAGACGGCTCTaGTCCCACCAGGGCAAAGGT +
Preference number: 5 (lower is better)
Translates to: ETELSITVHHALQRTDQVNRRRL*SHQGKG
Trigger: ACCTTTGCCCTGGTGGGACAAGAGCCGTCTTCTGTT...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CATGACAGTGGAGTGAGGATCAGAGGATCAGCCCCCTCCCGTTTCCTGGCACAGGAGGCTGTTCTCACGTaGATATCCAAGTCACCCTTG +
Preference number: 5 (lower is better)
Translates to: HDSGVRIRGSAPSRFLAQEAVLT*ISKSPL
Trigger: CAAGGGTGACTTGGATATCAACGTGAGAACAGCCTC...CTGTGCCAGGAAACGGGAGGGGGCTGATCCTCTGATCCTCACTCCACTGTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CAA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCGAGGCTGTTCTCACGTaGATATCCAAGTCACCCTTG +
Preference number: 5 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLEAVLT*ISKSPL
Trigger: CAAGGGTGACTTGGATATCAACGTGAGAACAGCCTC...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACACGAGTCAGATCCATCTaGATGGAGAGATTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTRVRSI*MERLRF
Trigger: GAACCTCAATCTCTCCATCAAGATGGATCTGACTCG...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGCGAGTCAGATCCATCTaGATGGAGAGATTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: THKSSWITGSPSHPTSPWRVRSI*MERLRF
Trigger: GAACCTCAATCTCTCCATCAAGATGGATCTGACTCG...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCCATCACTGTGCCTGCTaGAGGTATAAGCCGCTGAGT +
Preference number: 5 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPHHCAC*RYKPLS
Trigger: ACTCAGCGGCTTATACCTCAAGCAGGCACAGTGATG...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGGCGATTGCTATGCCGTaGGTAGGTGAGGGAGGACAA +
Preference number: 5 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEAIAMP*VGEGGQ
Trigger: TTGTCCTCCCTCACCTACCAACGGCATAGCAATCGC...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGCGATTGCTATGCCGTaGGTAGGTGAGGGAGGACAA +
Preference number: 5 (lower is better)
Translates to: TELSITVHHALQRTDQVLAIAMP*VGEGGQ
Trigger: TTGTCCTCCCTCACCTACCAACGGCATAGCAATCGC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCCCCCGCTTTGGCTTTTaGGCTGGCATCTGTGGATCA +
Preference number: 5 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCPRFGF*AGICGS
Trigger: TGATCCACAGATGCCAGCCAAAAAGCCAAAGCGGGG...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTGGAACCTGACCCGTaGCTTCTTCTCACTATGTTC +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGLEPDP*LLLTMF
Trigger: GAACATAGTGAGAAGAAGCAACGGGTCAGGTTCCAG...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCAGTCGTTGCTCCTCTGGATaGCTAGAGATCTCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: PFPGSCSLVASLALSLISRCSSG*LEISSW
Trigger: CCAGCTTGAGATCTCTAGCAATCCAGAGGAGCAACG...ACTGATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CAA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCCAGTATGCTGCTGCGTaGCTCCTCTGGATTGCTAGA +
Preference number: 5 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPQYAAA*LLWIAR
Trigger: TCTAGCAATCCAGAGGAGCAACGCAGCAGCATACTG...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGCTTTCCAGCTGCAGGTaGGCCTTCTCCTGGTTTAGC +
Preference number: 5 (lower is better)
Translates to: TELSITVHHALQRTDQVLLSSCR*AFSWFS
Trigger: GCTAAACCAGGAGAAGGCCAACCTGCAGCTGGAAAG...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCTTTCCAGCTGCAGGTaGGCCTTCTCCTGGTTTAGC +
Preference number: 5 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNLSSCR*AFSWFS
Trigger: GCTAAACCAGGAGAAGGCCAACCTGCAGCTGGAAAG...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGTTAGCCCGCTGCAGTaGGAAATCCTTAAAACACCT +
Preference number: 5 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLVSPLQ*EILKTP
Trigger: AGGTGTTTTAAGGATTTCCAACTGCAGCGGGCTAAC...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAGTTAGCCCGCTGCAGTaGGAAATCCTTAAAACACCT +
Preference number: 5 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTVSPLQ*EILKTP
Trigger: AGGTGTTTTAAGGATTTCCAACTGCAGCGGGCTAAC...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAACACACTCACATCTTCTaGCTGCTTTCGCAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQHTHIF*LLSQLH
Trigger: ATGGAGCTGCGAAAGCAGCAAGAAGATGTGAGTGTG...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCACACTCACATCTTCTaGCTGCTTTCGCAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHHTHIF*LLSQLH
Trigger: ATGGAGCTGCGAAAGCAGCAAGAAGATGTGAGTGTG...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGCATTGGGGAGGAGGTaGTTCATGGTAAACCAGCCC +
Preference number: 5 (lower is better)
Translates to: TELSITVHHALQRTDQVLALGRR*FMVNQP
Trigger: GGGCTGGTTTACCATGAACAACCTCCTCCCCAATGC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGGCATTGGGGAGGAGGTaGTTCATGGTAAACCAGCCC +
Preference number: 5 (lower is better)
Translates to: ETELSITVHHALQRTDQVALGRR*FMVNQP
Trigger: GGGCTGGTTTACCATGAACAACCTCCTCCCCAATGC...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCTGGGGCCGCAGTATaGCCTTATAGACAGCATTGG +
Preference number: 5 (lower is better)
Translates to: HKSLEPEPESDPVLQPLESGAAV*PYRQHW
Trigger: CCAATGCTGTCTATAAGGCAATACTGCGGCCCCAGA...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389003.7
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGGCTCGCTCTTTCATCTaGTCAATGTCATCCACAGGG +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGARSFI*SMSSTG
Trigger: CCCTGTGGATGACATTGACAAGATGAAAGAGCGAGC...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAAGCCATGTCCATGTGTaGTTGTGGTACTCCAGACAG +
Preference number: 5 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQSHVHV*LWYSRQ
Trigger: CTGTCTGGAGTACCACAACAACACATGGACATGGCT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATTGCGGCTGTCCCTTTaGACAGCCATGGCAAAGTCT +
Preference number: 5 (lower is better)
Translates to: HKSLEPEPESDPVLQPLELRLSL*TAMAKS
Trigger: AGACTTTGCCATGGCTGTCAAAAGGGACAGCCGCAA...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCAGCCTTAGCTTCTCTTaGATTACCTGGGCAACCAGG +
Preference number: 5 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLSLSFS*ITWATR
Trigger: CCTGGTTGCCCAGGTAATCAAAGAGAAGCTAAGGCT...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAGAATCGCCAAATCATTaGCGCCTGCCAAAGATGGAC +
Preference number: 5 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQESPNH*RLPKMD
Trigger: GTCCATCTTTGGCAGGCGCAAATGATTTGGCGATTC...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 90 bp AGCTGTCGTATTTGGGCCACATGCTGCCGCACAGCCTCCTGCAAATaGAGTATGCTGCTGCGTTGCTCCTCTGGATTGCTAGAGATCTCA +
Preference number: 5 (lower is better)
Translates to: SCRIWATCCRTASCK*SMLLRCSSGLLEIS
Trigger: TGAGATCTCTAGCAATCCAGAGGAGCAACGCAGCAGCATACTGCATTTGCAGGAGGCTGTGCGGCAGCATGTGGCCCAAATACGACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS GCA 90 bp TTCAGCAATTCCCAGCTGTCCATCTTCCTCTGTCAGGCGCCACCGTaGCTGAGCAAAGTAAAACTCAGTGCGACGGACCACACTCACATC +
Preference number: 5 (lower is better)
Translates to: FSNSQLSIFLCQAPP*LSKVKLSATDHTHI
Trigger: GATGTGAGTGTGGTCCGTCGCACTGAGTTTTACTTTGCTCAGGCACGGTGGCGCCTGACAGAGGAAGATGGACAGCTGGGAATTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000579924.6
ENST00000580395.1
CDS-3UTR CAA 90 bp AGTGTCCACACATCCACAGTGATAGCAGTGAGATGCCGACTGCTAATGCCCACCGAAGGACAGTTCCTTTaGATCCACCCCAGCGCTCTG +
Preference number: 5 (lower is better)
Translates to: SVHTSTVIAVRCRLLMPTEGQFL*IHPSAL
Trigger: CAGAGCGCTGGGGTGGATCAAAAGGAACTGTCCTTC...GGTGGGCATTAGCAGTCGGCATCTCACTGCTATCACTGTGGATGTGTGGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGATAGGCCAGGCAGAGTaGGCTCAACTAAGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGIGQAE*AQLSFL
Trigger: CAGAAAACTTAGTTGAGCCAACTCTGCCTGGCCTAT...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGTTCTCCATCTTAACCTaGACCTGGTCTGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: TELSITVHHALQRTDQVLFSILT*TWSGSC
Trigger: GCAGCTGCCAGACCAGGTCAAGGTTAAGATGGAGAA...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTTCTCCATCTTAACCTaGACCTGGTCTGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEFSILT*TWSGSC
Trigger: GCAGCTGCCAGACCAGGTCAAGGTTAAGATGGAGAA...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCGCCAGGGTAATGAACTaGTCCTCAGCTACAAAAGCT +
Preference number: 5 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLARVMN*SSATKA
Trigger: AGCTTTTGTAGCTGAGGACAAGTTCATTACCCTGGC...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGGCCAGGGTAATGAACTaGTCCTCAGCTACAAAAGCT +
Preference number: 5 (lower is better)
Translates to: VHHALQRTDQVLKSDAYGARVMN*SSATKA
Trigger: AGCTTTTGTAGCTGAGGACAAGTTCATTACCCTGGC...CCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTAAGTTGAAGATACTATaGCCATCAAAGCCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPKLKIL*PSKPAA
Trigger: GGCTGCTGGCTTTGATGGCAATAGTATCTTCAACTT...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAGCCTGGATCAAGCTCTaGAACCTGTTCTACCACATG +
Preference number: 5 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEAWIKL*NLFYHM
Trigger: CATGTGGTAGAACAGGTTCAAGAGCTTGATCCAGGC...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGAAAGCTCTTGACATaGCACTTGAGCATTCGACAC +
Preference number: 5 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTRKLLT*HLSIRH
Trigger: GTGTCGAATGCTCAAGTGCAATGTCAAGAGCTTTCT...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAATCTTGATGGAGAGATaGAGGTTCTCCGAGCGAAAG +
Preference number: 5 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQILMER*RFSERK
Trigger: CTTTCGCTCGGAGAACCTCAATCTCTCCATCAAGAT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGAGTTGCCCAGAAGTTTaGCATCCAGCGCAGGGTACT +
Preference number: 5 (lower is better)
Translates to: TQHYCPPCPAANRPGAEESCPEV*HPAQGT
Trigger: AGTACCCTGCGCTGGATGCAAAACTTCTGGGCAACT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGAAGGCAATGTCTCGATaGGTAGTTGTCCAGGAAATC +
Preference number: 5 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEKAMSR*VVVQEI
Trigger: GATTTCCTGGACAACTACCAATCGAGACATTGCCTT...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTGCAGCAGTTGGGCTTaGGCAGCTGACACAATGACA +
Preference number: 5 (lower is better)
Translates to: ITVHHALQRTDQVLKSDACSSWA*AADTMT
Trigger: TGTCATTGTGTCAGCTGCCAAAGCCCAACTGCTGCA...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGTGCAGCAGTTGGGCTTaGGCAGCTGACACAATGACA +
Preference number: 5 (lower is better)
Translates to: ETELSITVHHALQRTDQVCSSWA*AADTMT
Trigger: TGTCATTGTGTCAGCTGCCAAAGCCCAACTGCTGCA...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGCGTTGCTCCTCTGGATaGCTAGAGATCTCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: TQHYCPPCPAANRPGAEERCSSG*LEISSW
Trigger: CCAGCTTGAGATCTCTAGCAATCCAGAGGAGCAACG...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTCGTTGCTCCTCTGGATaGCTAGAGATCTCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: DRTQHYCPPCPAANRPGARCSSG*LEISSW
Trigger: CCAGCTTGAGATCTCTAGCAATCCAGAGGAGCAACG...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGAGCAGATTCTCATTCTaGCTGTCATCCTGCAAAGAC +
Preference number: 5 (lower is better)
Translates to: HPQILVDNGKPLPPHKSLSRFSF*LSSCKD
Trigger: GTCTTTGCAGGATGACAGCAAGAATGAGAATCTGCT...CAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGGTACTGCATCATCTGTaGCAATCAGCTGCCGAGGCT +
Preference number: 5 (lower is better)
Translates to: TELSITVHHALQRTDQVLVLHHL*QSAAEA
Trigger: AGCCTCGGCAGCTGATTGCAACAGATGATGCAGTAC...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCATGTCCATGTGTTGTaGTGGTACTCCAGACAGGGC +
Preference number: 5 (lower is better)
Translates to: ETELSITVHHALQRTDQVHVHVL*WYSRQG
Trigger: GCCCTGTCTGGAGTACCACAACAACACATGGACATG...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGTTGCGGCTGTCCCTTTaGACAGCCATGGCAAAGTCT +
Preference number: 5 (lower is better)
Translates to: TELSITVHHALQRTDQVLLRLSL*TAMAKS
Trigger: AGACTTTGCCATGGCTGTCAAAAGGGACAGCCGCAA...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTTGCGGCTGTCCCTTTaGACAGCCATGGCAAAGTCT +
Preference number: 5 (lower is better)
Translates to: TQHYCPPCPAANRPGAEELRLSL*TAMAKS
Trigger: AGACTTTGCCATGGCTGTCAAAAGGGACAGCCGCAA...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCGAATCGCCAAATCATTaGCGCCTGCCAAAGATGGAC +
Preference number: 5 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPESPNH*RLPKMD
Trigger: GTCCATCTTTGGCAGGCGCAAATGATTTGGCGATTC...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 90 bp CGGCCATCCTGCTCTGTGGGGCTGCTTTCAGTGGTGGCAAAGTACTaGATGCCATCCAAGAGGCAAGTCCAGGATGTCTTTTGCTTCAAT +
Preference number: 5 (lower is better)
Translates to: RPSCSVGLLSVVAKY*MPSKRQVQDVFCFN
Trigger: ATTGAAGCAAAAGACATCCTGGACTTGCCTCTTGGATGGCATGCAGTACTTTGCCACCACTGAAAGCAGCCCCACAGAGCAGGATGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 90 bp ATAGAATACATCTGCTTCTCCAGCTGTCGTATTTGGGCCACATGCTaGCGCACAGCCTCCTGCAAATGCAGTATGCTGCTGCGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: IEYICFSSCRIWATC*RTASCKCSMLLRCS
Trigger: GGAGCAACGCAGCAGCATACTGCATTTGCAGGAGGCTGTGCGGCAGCATGTGGCCCAAATACGACAGCTGGAGAAGCAGATGTATTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS GCA 90 bp CAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAATCATTTaGGCCTGCCAAAGATGGACTTCTTGCCAGGGTTCTTGTCGCCCA +
Preference number: 5 (lower is better)
Translates to: QSQILYCSHSNRQII*ACQRWTSCQGSCRP
Trigger: TGGGCGACAAGAACCCTGGCAAGAAGTCCATCTTTGGCAGGCGCAAATGATTTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 90 bp CAAAGCACAATGCCACATAGTGTCTGCCCAGAAGAGAAATCTCACTaGCACCAGGTCCATCCCTCCCATAGCAGTCTATTCCCCACCCTC +
Preference number: 5 (lower is better)
Translates to: QSTMPHSVCPEEKSH*HQVHPSHSSLFPTL
Trigger: GAGGGTGGGGAATAGACTGCTATGGGAGGGATGGACCTGGTGGCAGTGAGATTTCTCTTCTGGGCAGACACTATGTGGCATTGTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577417.5
CDS CCA 90 bp ACTGCCTCATCTCTACTCACAGTGAAAGTCATGGTAGAATTTGAGTaGGGGCATGTTCCTCTCCACTGCCACGTTACCCCACGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: TASSLLTVKVMVEFE*GHVPLHCHVTPRKP
Trigger: GGGCTTCCGTGGGGTAACGTGGCAGTGGAGAGGAACATGCCCCCACTCAAATTCTACCATGACTTTCACTGTGAGTAGAGATGAGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581064.1
CDS-3UTR CAA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACTCATGGCTAAGGAGTTaGCTGGAAATCCACAGGTTA +
Preference number: 5 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHSWLRS*LEIHRL
Trigger: TAACCTGTGGATTTCCAGCAAACTCCTTAGCCATGA...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ATCACGGTGGTACAGGAACTGCAGCAGCTTCAGAGTCCAAGTCAGGTGCCTCTTTTCTCCATCTTAACCTaGACCTGGTCTGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ITVVQELQQLQSPSQVPLFSILT*TWSGSC
Trigger: GCAGCTGCCAGACCAGGTCAAGGTTAAGATGGAGAA...AAGAGGCACCTGACTTGGACTCTGAAGCTGCTGCAGTTCCTGTACCACCGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR CAA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCAAGTTGAAGATACTATaGCCATCAAAGCCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLKLKIL*PSKPAA
Trigger: GGCTGCTGGCTTTGATGGCAATAGTATCTTCAACTT...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGTCCACCTCCTTGAAGTaGAAGATACTATTGCCATCA +
Preference number: 5 (lower is better)
Translates to: THKSSWITGSPSHPTSPWSTSLK*KILLPS
Trigger: TGATGGCAATAGTATCTTCAACTTCAAGGAGGTGGA...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAATATTTTCAGTTGTGTaGTATGGATCCTCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: GSDTHKSSWITGSPSHPTIFSVV*YGSSVA
Trigger: GGCCACTGAGGATCCATACAACACAACTGAAAATAT...TGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GGGCCCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATATATTTTCAGTTGTGTaGTATGGATCCTCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: GPIPWVLLSCCLSGPEPDIFSVV*YGSSVA
Trigger: GGCCACTGAGGATCCATACAACACAACTGAAAATAT...ATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CAA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGATATTTTCAGTTGTGTaGTATGGATCCTCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: THKSSWITGSPSHPTSPWIFSVV*YGSSVA
Trigger: GGCCACTGAGGATCCATACAACACAACTGAAAATAT...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCATCTTGATGGAGAGATaGAGGTTCTCCGAGCGAAAG +
Preference number: 5 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPILMER*RFSERK
Trigger: CTTTCGCTCGGAGAACCTCAATCTCTCCATCAAGAT...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGCTGGGTTTCAGGTTATaGAAGAGCTTTCCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: TELSITVHHALQRTDQVLLGFRL*KSFPLQ
Trigger: CTGCAGGGGAAAGCTCTTCAATAACCTGAAACCCAG...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAATAAGGCAGTTTCGGTaGTATATGTCATCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQIRQFR*YMSSVW
Trigger: CCAGACGGATGACATATACAACCGAAACTGCCTTAT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCATAAGGCAGTTTCGGTaGTATATGTCATCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLIRQFR*YMSSVW
Trigger: CCAGACGGATGACATATACAACCGAAACTGCCTTAT...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATACATGGAGCAGCAGGTaGTTGACAATGTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNTWSSR*LTMSRI
Trigger: GATCCTGGACATTGTCAACAACCTGCTGCTCCATGT...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGACATGGAGCAGCAGGTaGTTGACAATGTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: TQHYCPPCPAANRPGAEETWSSR*LTMSRI
Trigger: GATCCTGGACATTGTCAACAACCTGCTGCTCCATGT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGCTGGAACCTGACCCGTaGCTTCTTCTCACTATGTTC +
Preference number: 5 (lower is better)
Translates to: TELSITVHHALQRTDQVLLEPDP*LLLTMF
Trigger: GAACATAGTGAGAAGAAGCAACGGGTCAGGTTCCAG...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCACACTCACATCTTCTaGCTGCTTTCGCAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNHTHIF*LLSQLH
Trigger: ATGGAGCTGCGAAAGCAGCAAGAAGATGTGAGTGTG...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGAGCCATGTCCATGTGTaGTTGTGGTACTCCAGACAG +
Preference number: 5 (lower is better)
Translates to: TQHYCPPCPAANRPGAEESHVHV*LWYSRQ
Trigger: CTGTCTGGAGTACCACAACAACACATGGACATGGCT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCAGCCATGTCCATGTGTaGTTGTGGTACTCCAGACAG +
Preference number: 5 (lower is better)
Translates to: ITVHHALQRTDQVLKSDASHVHV*LWYSRQ
Trigger: CTGTCTGGAGTACCACAACAACACATGGACATGGCT...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGAGCCTTAGCTTCTCTTaGATTACCTGGGCAACCAGG +
Preference number: 5 (lower is better)
Translates to: TQHYCPPCPAANRPGAEESLSFS*ITWATR
Trigger: CCTGGTTGCCCAGGTAATCAAAGAGAAGCTAAGGCT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCTCCTCTTCCTGCTGTaGCATGTTCAGGTCCGATTT +
Preference number: 5 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNLLFLL*HVQVRF
Trigger: AAATCGGACCTGAACATGCAACAGCAGGAAGAGGAG...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 90 bp TGCATCTTCTCCGTGACTGATTTCACCAGCGCTAACACAAGTCCTTaGATCCCCACAGTGGACGTCTCTGCACTGCCCAGGATAGTTAGG +
Preference number: 5 (lower is better)
Translates to: CIFSVTDFTSANTSP*IPTVDVSALPRIVR
Trigger: CCTAACTATCCTGGGCAGTGCAGAGACGTCCACTGTGGGGATTCAAGGACTTGTGTTAGCGCTGGTGAAATCAGTCACGGAGAAGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 90 bp AGATCTAATCCCTCAGGGGGAAAAGGGCTGCCTGGATCAAGCTCTTaGACCTGTTCTACCACATGCTCAGGACCATGGAAGGAGGCATCT +
Preference number: 5 (lower is better)
Translates to: RSNPSGGKGLPGSSS*TCSTTCSGPWKEAS
Trigger: AGATGCCTCCTTCCATGGTCCTGAGCATGTGGTAGAACAGGTTCAAGAGCTTGATCCAGGCAGCCCTTTTCCCCCTGAGGGATTAGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000581064.1
CDS TCA 90 bp TTCTATCATCAGGGGCATGTTTGGTACCTCTGGCGATTTGCGAAATaGCCTTCTGACCCCAGAACTCCGAGTCAAACCCTGTGCCACACC +
Preference number: 5 (lower is better)
Translates to: FYHQGHVWYLWRFAK*PSDPRTPSQTLCHT
Trigger: GGTGTGGCACAGGGTTTGACTCGGAGTTCTGGGGTCAGAAGGTCATTTCGCAAATCGCCAGAGGTACCAAACATGCCCCTGATGATAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583860.1
CDS GCA 90 bp ATGATAGAATACATCTGCTTCTCCAGCTGTCGTATTTGGGCCACATaGTGCCGCACAGCCTCCTGCAAATGCAGTATGCTGCTGCGTTGC +
Preference number: 5 (lower is better)
Translates to: MIEYICFSSCRIWAT*CRTASCKCSMLLRC
Trigger: GCAACGCAGCAGCATACTGCATTTGCAGGAGGCTGTGCGGCAGCATGTGGCCCAAATACGACAGCTGGAGAAGCAGATGTATTCTATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS GCA 90 bp CAGATCCTGTACTGCAGCCACTCGAATCGCCAAATCATTTGCGCCTaGCAAAGATGGACTTCTTGCCAGGGTTCTTGTCGCCCACACTTA +
Preference number: 5 (lower is better)
Translates to: QILYCSHSNRQIICA*QRWTSCQGSCRPHL
Trigger: TAAGTGTGGGCGACAAGAACCCTGGCAAGAAGTCCATCTTTGGCAGGCGCAAATGATTTGGCGATTCGAGTGGCTGCAGTACAGGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCATCAATTTCCACTGTTaGCTGGTGTTGCTGAAACTT +
Preference number: 5 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPINFHC*LVLLKL
Trigger: AAGTTTCAGCAACACCAGCAAACAGTGGAAATTGAT...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGTCAGAGGTATCCACCTaGAGAACCATGATGTTTATA +
Preference number: 5 (lower is better)
Translates to: THKSSWITGSPSHPTSPWSEVST*RTMMFI
Trigger: TATAAACATCATGGTTCTCAAGGTGGATACCTCTGA...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTCAGAGGTATCCACCTaGAGAACCATGATGTTTATA +
Preference number: 5 (lower is better)
Translates to: PQILVDNGKPLPPHKSLESEVST*RTMMFI
Trigger: TATAAACATCATGGTTCTCAAGGTGGATACCTCTGA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTATAGGCCAGGCAGAGTaGGCTCAACTAAGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: DRTQHYCPPCPAANRPGAIGQAE*AQLSFL
Trigger: CAGAAAACTTAGTTGAGCCAACTCTGCCTGGCCTAT...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCATAGGCCAGGCAGAGTaGGCTCAACTAAGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCIGQAE*AQLSFL
Trigger: CAGAAAACTTAGTTGAGCCAACTCTGCCTGGCCTAT...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAACGAACCAGAAAGCTCTaGACATTGCACTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: HKSLEPEPESDPVLQPLERTRKL*TLHLSI
Trigger: AATGCTCAAGTGCAATGTCAAGAGCTTTCTGGTTCG...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTATCTTGATGGAGAGATaGAGGTTCTCCGAGCGAAAG +
Preference number: 5 (lower is better)
Translates to: DRTQHYCPPCPAANRPGAILMER*RFSERK
Trigger: CTTTCGCTCGGAGAACCTCAATCTCTCCATCAAGAT...AGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGAGTCAGATCCATCTaGATGGAGAGATTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNRVRSI*MERLRF
Trigger: GAACCTCAATCTCTCCATCAAGATGGATCTGACTCG...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCAAGGCAATGTCTCGATaGGTAGTTGTCCAGGAAATC +
Preference number: 5 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPKAMSR*VVVQEI
Trigger: GATTTCCTGGACAACTACCAATCGAGACATTGCCTT...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGGTAGAAAGATTACGTTaGAGTACAGCTGCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEVERLR*STAAFL
Trigger: CAAAAAGGCAGCTGTACTCAAACGTAATCTTTCTAC...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAATAAGGCAGTTTCGGTaGTATATGTCATCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEIRQFR*YMSSVW
Trigger: CCAGACGGATGACATATACAACCGAAACTGCCTTAT...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAAGCAGATTCTCATTCTaGCTGTCATCCTGCAAAGAC +
Preference number: 5 (lower is better)
Translates to: HKSLEPEPESDPVLQPLESRFSF*LSSCKD
Trigger: GTCTTTGCAGGATGACAGCAAGAATGAGAATCTGCT...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCAGTAGCAGATTCTCATTCTaGCTGTCATCCTGCAAAGAC +
Preference number: 5 (lower is better)
Translates to: PFPGSCSLVASLALSLISSRFSF*LSSCKD
Trigger: GTCTTTGCAGGATGACAGCAAGAATGAGAATCTGCT...ACTGATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CAA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAACCAGTAGTCACCAGTTaGGACTTATCCTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: HKSLEPEPESDPVLQPLEPVVTS*DLSSSS
Trigger: TGATGAAGAGGATAAGTCCAAACTGGTGACTACTGG...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCATTCCCTGGGTCTTGCTCTCTTGTTGCCTCTCTGGCCCTGAGCCTGATCAGTCCAGTAGTCACCAGTTaGGACTTATCCTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: PFPGSCSLVASLALSLISPVVTS*DLSSSS
Trigger: TGATGAAGAGGATAAGTCCAAACTGGTGACTACTGG...ACTGATCAGGCTCAGGGCCAGAGAGGCAACAAGAGAGCAAGACCCAGGGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CAA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCCCAGTAGTCACCAGTTaGGACTTATCCTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPPVVTS*DLSSSS
Trigger: TGATGAAGAGGATAAGTCCAAACTGGTGACTACTGG...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 90 bp ACCAACTGCCTCATCTCTACTCACAGTGAAAGTCATGGTAGAATTTaGGTGGGGGCATGTTCCTCTCCACTGCCACGTTACCCCACGGAA +
Preference number: 5 (lower is better)
Translates to: TNCLISTHSESHGRI*VGACSSPLPRYPTE
Trigger: TTCCGTGGGGTAACGTGGCAGTGGAGAGGAACATGCCCCCACTCAAATTCTACCATGACTTTCACTGTGAGTAGAGATGAGGCAGTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581064.1
CDS GCA 90 bp CTGCAGATAGGCCTTGTGACACTTGTCCAAGTTGCCCAGAAGTTTTaGATCCAGCGCAGGGTACTACTATATAGCAGAATTCGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LQIGLVTLVQVAQKF*IQRRVLLYSRIRGW
Trigger: CCAGCCCCGAATTCTGCTATATAGTAGTACCCTGCGCTGGATGCAAAACTTCTGGGCAACTTGGACAAGTGTCACAAGGCCTATCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000577261.1
ENST00000582417.1
CDS GCA 90 bp CAGGATGTCTTTTGCTTCAATGTATCACCATACCAGGCTGGATGGTaGTGGCACTGCAGCAGTTGGGCTTTGGCAGCTGACACAATGACA +
Preference number: 5 (lower is better)
Translates to: QDVFCFNVSPYQAGW*WHCSSWALAADTMT
Trigger: TGTCATTGTGTCAGCTGCCAAAGCCCAACTGCTGCAGTGCCAGCACCATCCAGCCTGGTATGGTGATACATTGAAGCAAAAGACATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACATCAATTTCCACTGTTaGCTGGTGTTGCTGAAACTT +
Preference number: 5 (lower is better)
Translates to: PMGSDTHKSSWITGSPSHINFHC*LVLLKL
Trigger: AAGTTTCAGCAACACCAGCAAACAGTGGAAATTGAT...GTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTCATGGCTAAGGAGTTaGCTGGAAATCCACAGGTTA +
Preference number: 5 (lower is better)
Translates to: ITVHHALQRTDQVLKSDASWLRS*LEIHRL
Trigger: TAACCTGTGGATTTCCAGCAAACTCCTTAGCCATGA...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGCCTCCACTCTTTAGAACTTaGCTGTTGATCTTACATAAG +
Preference number: 5 (lower is better)
Translates to: QILVDNGKPLPPHKSLEPPLFRT*LLILHK
Trigger: CTTATGTAAGATCAACAGCAAAGTTCTAAAGAGTGG...AGGCTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCCCACTCTTTAGAACTTaGCTGTTGATCTTACATAAG +
Preference number: 5 (lower is better)
Translates to: DTHKSSWITGSPSHPTSPPLFRT*LLILHK
Trigger: CTTATGTAAGATCAACAGCAAAGTTCTAAAGAGTGG...GGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAAGTCAGGTGCCTCTTTaGACTATTCATGGACAATAC +
Preference number: 5 (lower is better)
Translates to: HKSLEPEPESDPVLQPLESQVPL*TIHGQY
Trigger: GTATTGTCCATGAATAGTCAAAAGAGGCACCTGACT...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAGTGGTGTATCTCCAAGTaGAATGGAAATGTTGACATT +
Preference number: 5 (lower is better)
Translates to: PQILVDNGKPLPPHKSLEWCISK*NGNVDI
Trigger: AATGTCAACATTTCCATTCAACTTGGAGATACACCA...CTCCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGTTGAAGATACTATaGCCATCAAAGCCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: TELSITVHHALQRTDQVLKLKIL*PSKPAA
Trigger: GGCTGCTGGCTTTGATGGCAATAGTATCTTCAACTT...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCACCTCCTTGAAGTaGAAGATACTATTGCCATCA +
Preference number: 5 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPSTSLK*KILLPS
Trigger: TGATGGCAATAGTATCTTCAACTTCAAGGAGGTGGA...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAGAAAGCTCTTGACATaGCACTTGAGCATTCGACAC +
Preference number: 5 (lower is better)
Translates to: TELSITVHHALQRTDQVLRKLLT*HLSIRH
Trigger: GTGTCGAATGCTCAAGTGCAATGTCAAGAGCTTTCT...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGCGAACCAGAAAGCTCTaGACATTGCACTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: TELSITVHHALQRTDQVLRTRKL*TLHLSI
Trigger: AATGCTCAAGTGCAATGTCAAGAGCTTTCTGGTTCG...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGGCAATGTCTCGATaGGTAGTTGTCCAGGAAATC +
Preference number: 5 (lower is better)
Translates to: TELSITVHHALQRTDQVLKAMSR*VVVQEI
Trigger: GATTTCCTGGACAACTACCAATCGAGACATTGCCTT...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAGTAGAAAGATTACGTTaGAGTACAGCTGCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQVERLR*STAAFL
Trigger: CAAAAAGGCAGCTGTACTCAAACGTAATCTTTCTAC...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAAGTCCAGGATGTCTTTaGCTTCAATGTATCACCATA +
Preference number: 5 (lower is better)
Translates to: PWSLSQSQILYCSHSNRQSPGCL*LQCITI
Trigger: TATGGTGATACATTGAAGCAAAAGACATCCTGGACT...TTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCAGTCCAGGATGTCTTTaGCTTCAATGTATCACCATA +
Preference number: 5 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLSPGCL*LQCITI
Trigger: TATGGTGATACATTGAAGCAAAAGACATCCTGGACT...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CTTGATCAGGACTATCCCCCTACCCTTTCACTTGACCCCAAGGGAATAGGGTCCGTTAGCCCGCTGCAGTaGGAAATCCTTAAAACACCT +
Preference number: 5 (lower is better)
Translates to: LDQDYPPTLSLDPKGIGSVSPLQ*EILKTP
Trigger: AGGTGTTTTAAGGATTTCCAACTGCAGCGGGCTAAC...GGACCCTATTCCCTTGGGGTCAAGTGAAAGGGTAGGGGGATAGTCCTGATCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CAA 90 bp ACCCACAAATCCTCGTGGATAACGGGAAGCCCCTCCCACCCCACAAGTCCCTGGAAAAATTTATCACACTaGATCAGGACTATCCCCCTA +
Preference number: 5 (lower is better)
Translates to: THKSSWITGSPSHPTSPWKNLSH*IRTIPL
Trigger: TAGGGGGATAGTCCTGATCAAGTGTGATAAATTTTT...CCAGGGACTTGTGGGGTGGGAGGGGCTTCCCGTTATCCACGAGGATTTGTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS TCA 90 bp CGAACCAGAAAGCTCTTGACATTGCACTTGAGCATTCGACACCACTaGATGACAAGATCTAATCCCTCAGGGGGAAAAGGGCTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: RTRKLLTLHLSIRHH*MTRSNPSGGKGLPG
Trigger: TCCAGGCAGCCCTTTTCCCCCTGAGGGATTAGATCTTGTCATTCAGTGGTGTCGAATGCTCAAGTGCAATGTCAAGAGCTTTCTGGTTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000581064.1
CDS TCA 90 bp CCACTGTGTACTGGAATATTTCCGAGTGAAAGTCATGGTAGAATTTaGGTGGGGGCATGTTCCTCTCCACTGCCACGTTACCCCACGGAA +
Preference number: 5 (lower is better)
Translates to: PLCTGIFPSESHGRI*VGACSSPLPRYPTE
Trigger: TTCCGTGGGGTAACGTGGCAGTGGAGAGGAACATGCCCCCACTCAAATTCTACCATGACTTTCACTCGGAAATATTCCAGTACACAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 90 bp CATCCTGCTCTGTGGGGCTGCTTTCAGTGGTGGCAAAGTACTGCATaGCATCCAAGAGGCAAGTCCAGGATGTCTTTTGCTTCAATGTAT +
Preference number: 5 (lower is better)
Translates to: HPALWGCFQWWQSTA*HPRGKSRMSFASMY
Trigger: ATACATTGAAGCAAAAGACATCCTGGACTTGCCTCTTGGATGGCATGCAGTACTTTGCCACCACTGAAAGCAGCCCCACAGAGCAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTATGGGCTCTTTAGAACTTTGCTGTaGATCTTACATAAGCTCACC +
Preference number: 5 (lower is better)
Translates to: HHALQRTDQVLKSDAYGLFRTLL*ILHKLT
Trigger: GGTGAGCTTATGTAAGATCAACAGCAAAGTTCTAAA...GAGCCCATAGGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATAGTCAGGTGCCTCTTTaGACTATTCATGGACAATAC +
Preference number: 5 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNSQVPL*TIHGQY
Trigger: GTATTGTCCATGAATAGTCAAAAGAGGCACCTGACT...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAATTCCACCTCCTTGAAGTaGAAGATACTATTGCCATCA +
Preference number: 5 (lower is better)
Translates to: TSPWSLSQSQILYCSHSNSTSLK*KILLPS
Trigger: TGATGGCAATAGTATCTTCAACTTCAAGGAGGTGGA...ATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCAGTAGCTGTAGTCTTTaGGCACTCTCCTTACTTTCA +
Preference number: 5 (lower is better)
Translates to: ITVHHALQRTDQVLKSDASSCSL*ALSLLS
Trigger: TGAAAGTAAGGAGAGTGCCAAAAGACTACAGCTACT...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGAGTAGCTGTAGTCTTTaGGCACTCTCCTTACTTTCA +
Preference number: 5 (lower is better)
Translates to: ETELSITVHHALQRTDQVSSCSL*ALSLLS
Trigger: TGAAAGTAAGGAGAGTGCCAAAAGACTACAGCTACT...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GTGATGCCTATGGGCTCTGACACCCACAAATCCTCGTGGATAACGGGAAGCCCCAGTGCATATTTTCAGTaGTGTTGTATGGATCCTCAG +
Preference number: 5 (lower is better)
Translates to: VMPMGSDTHKSSWITGSPSAYFQ*CCMDPQ
Trigger: CTGAGGATCCATACAACACAACTGAAAATATGCACT...GGGGCTTCCCGTTATCCACGAGGATTTGTGGGTGTCAGAGCCCATAGGCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CACAAGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTGCAGCCACTCGAAAGTGCATATTTTCAGTaGTGTTGTATGGATCCTCAG +
Preference number: 5 (lower is better)
Translates to: HKSLEPEPESDPVLQPLESAYFQ*CCMDPQ
Trigger: CTGAGGATCCATACAACACAACTGAAAATATGCACT...TTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 90 bp TCACTTTCCAGCTGCAGGTTGGCCTTCTCCTGGTTTAGCTGCAACTaGAGCTTCTGGTTCAGGTCAAGCAGATTCTCATTCTTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: SLSSCRLAFSWFSCN*SFWFRSSRFSFLLS
Trigger: TGACAGCAAGAATGAGAATCTGCTTGACCTGAACCAGAAGCTTCAGTTGCAGCTAAACCAGGAGAAGGCCAACCTGCAGCTGGAAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000579924.6
ENST00000580395.1
CDS-3UTR CAA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCATCAATTTCCACTGTTaGCTGGTGTTGCTGAAACTT +
Preference number: 5 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAINFHC*LVLLKL
Trigger: AAGTTTCAGCAACACCAGCAAACAGTGGAAATTGAT...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTCAGAGGTATCCACCTaGAGAACCATGATGTTTATA +
Preference number: 5 (lower is better)
Translates to: TQHYCPPCPAANRPGAEESEVST*RTMMFI
Trigger: TATAAACATCATGGTTCTCAAGGTGGATACCTCTGA...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GGTACAGGAACTGCAGCAGCTTCAGAGTCCAAGTCAGGTGCCTCTTTTGACTATATAGGCCAGGCAGAGTaGGCTCAACTAAGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: GTGTAAASESKSGASFDYIGQAE*AQLSFL
Trigger: CAGAAAACTTAGTTGAGCCAACTCTGCCTGGCCTAT...ATAGTCAAAAGAGGCACCTGACTTGGACTCTGAAGCTGCTGCAGTTCCTGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR CAA 90 bp CTTGATCAGGACTATCCCCCTACCCTTTCACTTGACCCCAAGGGAATAGGGTCCAGTCAGGTGCCTCTTTaGACTATTCATGGACAATAC +
Preference number: 5 (lower is better)
Translates to: LDQDYPPTLSLDPKGIGSSQVPL*TIHGQY
Trigger: GTATTGTCCATGAATAGTCAAAAGAGGCACCTGACT...GGACCCTATTCCCTTGGGGTCAAGTGAAAGGGTAGGGGGATAGTCCTGATCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528896.7
CDS-3UTR CAA 90 bp CCGACCCATGAACCTTCCAGCAGCAGTTCAGTGCTCATCTGTGCCATATCAGAGAGTCAGGTGCCTCTTTaGACTATTCATGGACAATAC +
Preference number: 5 (lower is better)
Translates to: PTHEPSSSSSVLICAISESQVPL*TIHGQY
Trigger: GTATTGTCCATGAATAGTCAAAAGAGGCACCTGACT...CTCTGATATGGCACAGATGAGCACTGAACTGCTGCTGGAAGGTTCATGGGTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR CAA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGAGTGCATATTTTCAGTaGTGTTGTATGGATCCTCAG +
Preference number: 5 (lower is better)
Translates to: TQHYCPPCPAANRPGAEESAYFQ*CCMDPQ
Trigger: CTGAGGATCCATACAACACAACTGAAAATATGCACT...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp AGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCGTAGAAAGATTACGTTaGAGTACAGCTGCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: RQNSALLSTMPCSEQTRCVERLR*STAAFL
Trigger: CAAAAAGGCAGCTGTACTCAAACGTAATCTTTCTAC...GCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS TCA 90 bp ATCCGTCTGGCAGGCAGCAATGCCACACAACTGGTCACTCATGCCTaGTTCCTCTTCTGTGAACACTACAAACCTATCTGTCTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: IRLAGSNATQLVTHA*FLFCEHYKPICLFN
Trigger: ATTGAAGAGACAGATAGGTTTGTAGTGTTCACAGAAGAGGAATCAGGCATGAGTGACCAGTTGTGTGGCATTGCTGCCTGCCAGACGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 90 bp GAGGAGGTTGTTCATGGTAAACCAGCCCAACTCCAGAAGATGTTCTaGTGTGTCATCAGACTTATTCACCTTGCTGTAGAGGAACCTCTG +
Preference number: 5 (lower is better)
Translates to: EEVVHGKPAQLQKMF*CVIRLIHLAVEEPL
Trigger: CAGAGGTTCCTCTACAGCAAGGTGAATAAGTCTGATGACACAGCAGAACATCTTCTGGAGTTGGGCTGGTTTACCATGAACAACCTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000579924.6
CDS-3UTR CAA 90 bp ACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTTTAGAACTTTGCTGTaGATCTTACATAAGCTCACC +
Preference number: 5 (lower is better)
Translates to: TQHYCPPCPAANRPGAEEFRTLL*ILHKLT
Trigger: GGTGAGCTTATGTAAGATCAACAGCAAAGTTCTAAA...CTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGAAGAGTGATGCCTTTAGAACTTTGCTGTaGATCTTACATAAGCTCACC +
Preference number: 5 (lower is better)
Translates to: ITVHHALQRTDQVLKSDAFRTLL*ILHKLT
Trigger: GGTGAGCTTATGTAAGATCAACAGCAAAGTTCTAAA...GGCATCACTCTTCAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp GAGACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCCACTCTTTAGAACTTaGCTGTTGATCTTACATAAG +
Preference number: 5 (lower is better)
Translates to: ETELSITVHHALQRTDQVPLFRT*LLILHK
Trigger: CTTATGTAAGATCAACAGCAAAGTTCTAAAGAGTGG...CACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp ACAGAACTCAGCATTACTGTCCACCATGCCCTGCAGCGAACAGACCAGGTGCTGTGGTGTATCTCCAAGTaGAATGGAAATGTTGACATT +
Preference number: 5 (lower is better)
Translates to: TELSITVHHALQRTDQVLWCISK*NGNVDI
Trigger: AATGTCAACATTTCCATTCAACTTGGAGATACACCA...CAGCACCTGGTCTGTTCGCTGCAGGGCATGGTGGACAGTAATGCTGAGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 90 bp CTAGGCAGGTGTCCTCCAGCTGACCACTCTTTAGAACTTTGCTGTTaGTCTTACATAAGCTCACCTCACAGATTAGCCTGGGAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: LGRCPPADHSLELCC*SYISSPHRLAWERK
Trigger: TTTCCTTTCCCAGGCTAATCTGTGAGGTGAGCTTATGTAAGATCAACAGCAAAGTTCTAAAGAGTGGTCAGCTGGAGGACACCTGCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577580.1
CDS GCA 90 bp CTCTCAATACAGCTGCCTTTGTGTGACCATATACCCCAGATACCTTaGTGTAGAGGAACCTCTGCAGTTCTAATTCAGCAATTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: LSIQLPLCDHIPQIP*CRGTSAVLIQQFPA
Trigger: AGCTGGGAATTGCTGAATTAGAACTGCAGAGGTTCCTCTACAGCAAGGTATCTGGGGTATATGGTCACACAAAGGCAGCTGTATTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580395.1
CDS TCA 90 bp AAGATACGAGACAGACATTGGGCACAGGTATCTGATGCTTCCACCTaGAGTCCTCGAATGGTACAATCAAGAAAAAGGGTATCTGACTGG +
Preference number: 5 (lower is better)
Translates to: KIRDRHWAQVSDAST*SPRMVQSRKRVSDW
Trigger: CCAGTCAGATACCCTTTTTCTTGATTGTACCATTCGAGGACTTCAGGTGGAAGCATCAGATACCTGTGCCCAATGTCTGTCTCGTATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 90 bp CTATCACTCTCCCATCTTCTGTGTCAGGAGAGACCTCACCTCTTTTaGCTATTCATGGACAATACCACGCTTGTGTTCTCCATCTTAACC +
Preference number: 5 (lower is better)
Translates to: LSLSHLLCQERPHLF*LFMDNTTLVFSILT
Trigger: GGTTAAGATGGAGAACACAAGCGTGGTATTGTCCATGAATAGTCAAAAGAGGTGAGGTCTCTCCTGACACAGAAGATGGGAGAGTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579253.1
CDS GCA 90 bp CTCACATCTTCTTGCTGCTTTCGCAGCTCCATCTTGTTAGCCCGCTaGAGTTGGAAATCCTTAAAACACCTGATGAGGATATTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: LTSSCCFRSSILLAR*SWKSLKHLMRIFSS
Trigger: AGAACTGAATATCCTCATCAGGTGTTTTAAGGATTTCCAACTGCAGCGGGCTAACAAGATGGAGCTGCGAAAGCAGCAAGAAGATGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000579924.6
ENST00000580395.1
CDS-3UTR CAA 90 bp GGAACTGCAGCAGCTTCAGAGTCCAAGTCAGGTGCCTCTTTTGACTATTCATGGTCAGAGGTATCCACCTaGAGAACCATGATGTTTATA +
Preference number: 5 (lower is better)
Translates to: GTAAASESKSGASFDYSWSEVST*RTMMFI
Trigger: TATAAACATCATGGTTCTCAAGGTGGATACCTCTGA...CCATGAATAGTCAAAAGAGGCACCTGACTTGGACTCTGAAGCTGCTGCAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS TCA 90 bp CAGCAATGCCACACAACTGGTCACTCATGCCTGATTCCTCTTCTGTaGACACTACAAACCTATCTGTCTCTTCAATTAGCTTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: QQCHTTGHSCLIPLL*TLQTYLSLQLASAT
Trigger: TGTTGCAGAAGCTAATTGAAGAGACAGATAGGTTTGTAGTGTTCACAGAAGAGGAATCAGGCATGAGTGACCAGTTGTGTGGCATTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS-3UTR CAA 90 bp CTTCAGAGTCCAAGTCAGGTGCCTCTTTTGACTATTCATGGACAATACCACGCTAGTCAGGTGCCTCTTTaGACTATTCATGGACAATAC +
Preference number: 5 (lower is better)
Translates to: LQSPSQVPLLTIHGQYHASQVPL*TIHGQY
Trigger: GTATTGTCCATGAATAGTCAAAAGAGGCACCTGACT...AGCGTGGTATTGTCCATGAATAGTCAAAAGAGGCACCTGACTTGGACTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581267.1
ENST00000583403.5
CDS TCA 90 bp CAGGAGGAAATGAGGCATCTGAATGATCATGGCATACTTACCAGCTaGCCACTCTTTAGAACTTTGCTGTTGATCTTACATAAGCTCACC +
Preference number: 5 (lower is better)
Translates to: QEEMRHLNDHGILTS*PLFRTLLLILHKLT
Trigger: GGTGAGCTTATGTAAGATCAACAGCAAAGTTCTAAAGAGTGGTCAGCTGGTAAGTATGCCATGATCATTCAGATGCCTCATTTCCTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582901.1
CDS-3UTR CAA 90 bp ATATGCCATAAGGACTCAGAGGTATCCACCTTGAGAACCATGATGTTTATAGCATTTAGAACTTTGCTGTaGATCTTACATAAGCTCACC +
Preference number: 5 (lower is better)
Translates to: ICHKDSEVSTLRTMMFIAFRTLL*ILHKLT
Trigger: GGTGAGCTTATGTAAGATCAACAGCAAAGTTCTAAA...TGCTATAAACATCATGGTTCTCAAGGTGGATACCTCTGAGTCCTTATGGCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS-3UTR CAA 90 bp TTGCTGTTGATCTTACATAAGCTCACCTCACAGATTAGCCTTTTCCCATCACTACCACTCTTTAGAACTTaGCTGTTGATCTTACATAAG +
Preference number: 5 (lower is better)
Translates to: LLLILHKLTSQISLFPSLPLFRT*LLILHK
Trigger: CTTATGTAAGATCAACAGCAAAGTTCTAAAGAGTGG...TAGTGATGGGAAAAGGCTAATCTGTGAGGTGAGCTTATGTAAGATCAACAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583403.5
CDS GCA 72 bp GACGCCGACGGGAGCAAGGCTGACCACTCTGCTCGGTaGCCACAAGTCGACCCATTAGCCGCCAGTCACGGA +
Preference number: 6 (lower is better)
Translates to: DADGSKADHSAR*PQVDPLAASHG
Trigger: TCCGTGACTGGCGGCTAATGGGTCGACTTGTGGGCACCGAGCAGAGTGGTCAGCCTTGCTCCCGTCGGCGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000581064.1
CDS CCA 72 bp TTAGCTCCGCCTGCAGCTTCCGCTGACACCACTTGGTaGCCAACCGGACCACAAGCCACCTGGGCTGGCGGT +
Preference number: 6 (lower is better)
Translates to: LAPPAASADTTW*PTGPQATWAGG
Trigger: ACCGCCAGCCCAGGTGGCTTGTGGTCCGGTTGGCCACCAAGTGGTGTCAGCGGAAGCTGCAGGCGGAGCTAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389003.7
ENST00000544884.5
CDS GCA 72 bp TGGGTGGGTGTGGCGCCCGCTGAATGTGGGAGTCACTaGCCACACGCCAGCAGAGGTGGTCCACAGTTAGGA +
Preference number: 6 (lower is better)
Translates to: WVGVAPAECGSH*PHASRGGPQLG
Trigger: TCCTAACTGTGGACCACCTCTGCTGGCGTGTGGGCAGTGACTCCCACATTCAGCGGGCGCCACACCCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp TCTTTAGCTCCGCCTGCAGCTTCCGCTGACACCACTTaGTGGCCAACCGGACCACAAGCCACCTGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: SLAPPAASADTT*WPTGPQATWAG
Trigger: GCCAGCCCAGGTGGCTTGTGGTCCGGTTGGCCACCAAGTGGTGTCAGCGGAAGCTGCAGGCGGAGCTAAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389003.7
ENST00000544884.5
CDS TCA 72 bp CCCCAAACATGCATATTGGGTGGGTGTGGCGCCCGCTaGATGTGGGAGTCACTGCCCACACGCCAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: PQTCILGGCGAR*MWESLPTRQQR
Trigger: CCTCTGCTGGCGTGTGGGCAGTGACTCCCACATTCAGCGGGCGCCACACCCACCCAATATGCATGTTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 72 bp GGCAGGAACTCTGGGGCCCGCAGAGTGACACTATGGTaGTCATGGGGGTTCCCATGGCACAGCCACTGCAGG +
Preference number: 6 (lower is better)
Translates to: GRNSGARRVTLW*SWGFPWHSHCR
Trigger: CCTGCAGTGGCTGTGCCATGGGAACCCCCATGATCACCATAGTGTCACTCTGCGGGCCCCAGAGTTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000577261.1
ENST00000582417.1
CDS CCA 72 bp GAAGACGGCTCTTGTCCCACCAGGGCAAAGGTGGGCTaGGGTCAGCTGAGGGCTTGGTCAAGAGGTCCACAC +
Preference number: 6 (lower is better)
Translates to: EDGSCPTRAKVG*GQLRAWSRGPH
Trigger: GTGTGGACCTCTTGACCAAGCCCTCAGCTGACCCCAGCCCACCTTTGCCCTGGTGGGACAAGAGCCGTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 72 bp AGGGCACCTCAGGCAGGAACTCTGGGGCCCGCAGAGTaGCACTATGGTGATCATGGGGGTTCCCATGGCACA +
Preference number: 6 (lower is better)
Translates to: RAPQAGTLGPAE*HYGDHGGSHGT
Trigger: TGTGCCATGGGAACCCCCATGATCACCATAGTGTCACTCTGCGGGCCCCAGAGTTCCTGCCTGAGGTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000577261.1
ENST00000582417.1
CDS CCA 72 bp ATGAAGCTGGCCCAAGGGCACCTCAGGCAGGAACTCTaGGGCCCGCAGAGTGACACTATGGTGATCATGGGG +
Preference number: 6 (lower is better)
Translates to: MKLAQGHLRQEL*GPQSDTMVIMG
Trigger: CCCCATGATCACCATAGTGTCACTCTGCGGGCCCCAGAGTTCCTGCCTGAGGTGCCCTTGGGCCAGCTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000577261.1
ENST00000582417.1
CDS CCA 72 bp TTAGCTCCGCCTGCAGCTTCCGCTGACACCACTTGGTaGCCAACCGGACCACAAGCCACCGGCCTAGAAAGA +
Preference number: 6 (lower is better)
Translates to: LAPPAASADTTW*PTGPQATGLER
Trigger: TCTTTCTAGGCCGGTGGCTTGTGGTCCGGTTGGCCACCAAGTGGTGTCAGCGGAAGCTGCAGGCGGAGCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528896.7
ENST00000577417.5
ENST00000580882.5
ENST00000583403.5
CDS CCA 72 bp TCTTTAGCTCCGCCTGCAGCTTCCGCTGACACCACTTaGTGGCCAACCGGACCACAAGCCACCGGCCTAGAA +
Preference number: 6 (lower is better)
Translates to: SLAPPAASADTT*WPTGPQATGLE
Trigger: TTCTAGGCCGGTGGCTTGTGGTCCGGTTGGCCACCAAGTGGTGTCAGCGGAAGCTGCAGGCGGAGCTAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528896.7
ENST00000577417.5
ENST00000580882.5
ENST00000583403.5
CDS TCA 72 bp AAGGAGCCAATCTTTAGCTCCGCCTGCAGCTTCCGCTaGCACCACTTGGTGGCCAACCGGACCACAAGCCAC +
Preference number: 6 (lower is better)
Translates to: KEPIFSSACSFR*HHLVANRTTSH
Trigger: GTGGCTTGTGGTCCGGTTGGCCACCAAGTGGTGTCAGCGGAAGCTGCAGGCGGAGCTAAAGATTGGCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000577417.5
ENST00000580882.5
ENST00000583403.5
CDS GCA 72 bp CCATCAAAGCCAGCAGCCAGCTCTGGACAGTATGCCTaGAGGGAACCTCCATGCCGGCTCAGTGACACACTC +
Preference number: 6 (lower is better)
Translates to: PSKPAASSGQYA*REPPCRLSDTL
Trigger: GAGTGTGTCACTGAGCCGGCATGGAGGTTCCCTGCAGGCATACTGTCCAGAGCTGGCTGCTGGCTTTGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp AAGTGCCTCACCCCAAACATGCATATTGGGTGGGTGTaGCGCCCGCTGAATGTGGGAGTCACTGCCCACACG +
Preference number: 6 (lower is better)
Translates to: KCLTPNMHIGWV*RPLNVGVTAHT
Trigger: CGTGTGGGCAGTGACTCCCACATTCAGCGGGCGCCACACCCACCCAATATGCATGTTTGGGGTGAGGCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp GGGTCAGCTGAGGGCTTGGTCAAGAGGTCCACACACTaGCCAATTAGTGTCCAGGCTGGATCCCAGCATGGG +
Preference number: 6 (lower is better)
Translates to: GSAEGLVKRSTH*PISVQAGSQHG
Trigger: CCCATGCTGGGATCCAGCCTGGACACTAATTGGCCAGTGTGTGGACCTCTTGACCAAGCCCTCAGCTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp CTGTGCTCACCTCCAGGGTTAGGTTTAGCAGCCGCTTaGGGGGTAATGGCTCAGGGGCACGGCCTTCTAGCT +
Preference number: 6 (lower is better)
Translates to: LCSPPGLGLAAA*GVMAQGHGLLA
Trigger: AGCTAGAAGGCCGTGCCCCTGAGCCATTACCCCCAAAGCGGCTGCTAAACCTAACCCTGGAGGTGAGCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp CACCAGGGCAAAGGTGGGCTGGGGTCAGCTGAGGGCTaGGTCAAGAGGTCCACACACTGGCCAATTAGTGTC +
Preference number: 6 (lower is better)
Translates to: HQGKGGLGSAEG*VKRSTHWPISV
Trigger: GACACTAATTGGCCAGTGTGTGGACCTCTTGACCAAGCCCTCAGCTGACCCCAGCCCACCTTTGCCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 72 bp TCCCAGCTGTCCATCTTCCTCTGTCAGGCGCCACCGTaGCTGAGCAAAGTAAAACTCAGTGCGACGGACCAC +
Preference number: 6 (lower is better)
Translates to: SQLSIFLCQAPP*LSKVKLSATDH
Trigger: GTGGTCCGTCGCACTGAGTTTTACTTTGCTCAGGCACGGTGGCGCCTGACAGAGGAAGATGGACAGCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000579924.6
ENST00000580395.1
CDS CCA 72 bp CAGAACAAGTGCCTCACCCCAAACATGCATATTGGGTaGGTGTGGCGCCCGCTGAATGTGGGAGTCACTGCC +
Preference number: 6 (lower is better)
Translates to: QNKCLTPNMHIG*VWRPLNVGVTA
Trigger: GGCAGTGACTCCCACATTCAGCGGGCGCCACACCCACCCAATATGCATGTTTGGGGTGAGGCACTTGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp CGGCAGTTGCAACGCGAAATGATCCGCTGGACTTGCTaGGCTTGCTGTGCCTCAGCTGGCTGGTTCCAATCT +
Preference number: 6 (lower is better)
Translates to: RQLQREMIRWTC*ACCASAGWFQS
Trigger: AGATTGGAACCAGCCAGCTGAGGCACAGCAAGCCCAGCAAGTCCAGCGGATCATTTCGCGTTGCAACTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp AGTCAAACCCTGTGCCACACCCTTCCCAGGGCCCAGTaGTACTGCATCATCTGTTGCAATCAGCTGCCGAGG +
Preference number: 6 (lower is better)
Translates to: SQTLCHTLPRAQ*YCIICCNQLPR
Trigger: CCTCGGCAGCTGATTGCAACAGATGATGCAGTACCACTGGGCCCTGGGAAGGGTGTGGCACAGGGTTTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000583860.1
CDS CAA 72 bp AGAGAGCTCCTCCTCAGCTGTGCGATTGCTATGCCGTaGGTAGGTGAGGGAGGACAAGCTCAGCAGGTGGGT +
Preference number: 6 (lower is better)
Translates to: RELLLSCAIAMP*VGEGGQAQQVG
Trigger: ACCCACCTGCTGAGCTTGTCCTCCCTCACCTACCAACGGCATAGCAATCGCACAGCTGAGGAGGAGCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp CATTCGGCAGTTGCAACGCGAAATGATCCGCTGGACTaGCTGGGCTTGCTGTGCCTCAGCTGGCTGGTTCCA +
Preference number: 6 (lower is better)
Translates to: HSAVATRNDPLD*LGLLCLSWLVP
Trigger: TGGAACCAGCCAGCTGAGGCACAGCAAGCCCAGCAAGTCCAGCGGATCATTTCGCGTTGCAACTGCCGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp TCCTTAACAGAGATACCCCCAACAGGGGGCCGAACTTaGCTGAAGAGGCGGAGAGCTAGCTGTCGCCCAGAC +
Preference number: 6 (lower is better)
Translates to: SLTEIPPTGGRT*LKRRRASCRPD
Trigger: GTCTGGGCGACAGCTAGCTCTCCGCCTCTTCAGCAAAGTTCGGCCCCCTGTTGGGGGTATCTCTGTTAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 90 bp GAGAGCATGGAAAGGCTGAGCACTGGGGTAGGGATGTCAGGGGCCTaGCAACAGGGTTGCATCTTCTCCGTGACTGATTTCACCAGCGCT +
Preference number: 6 (lower is better)
Translates to: ESMERLSTGVGMSGA*QQGCIFSVTDFTSA
Trigger: AGCGCTGGTGAAATCAGTCACGGAGAAGATGCAACCCTGTTGCAAGGCCCCTGACATCCCTACCCCAGTGCTCAGCCTTTCCATGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 90 bp CACATGCTGCCGCACAGCCTCCTGCAAATGCAGTATGCTGCTGCGTaGCTCCTCTGGATTGCTAGAGATCTCAAGCTGGAACCTGACCCG +
Preference number: 6 (lower is better)
Translates to: HMLPHSLLQMQYAAA*LLWIARDLKLEPDP
Trigger: CGGGTCAGGTTCCAGCTTGAGATCTCTAGCAATCCAGAGGAGCAACGCAGCAGCATACTGCATTTGCAGGAGGCTGTGCGGCAGCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS TCA 72 bp CCACAGGGTGCTCTGGCGATTTGCGAAATGACCTTCTaGCCCCAGAACTCCGAGTCAAACCCTGTGCCACAC +
Preference number: 6 (lower is better)
Translates to: PQGALAICEMTF*PQNSESNPVPH
Trigger: GTGTGGCACAGGGTTTGACTCGGAGTTCTGGGGTCAGAAGGTCATTTCGCAAATCGCCAGAGCACCCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 72 bp TCCTCAATTTTGCGGGCAGGCAACAACTCCCCATGCTaGTTCCGAAGGGCGGCCACTTTAGCATCCAGTAGC +
Preference number: 6 (lower is better)
Translates to: SSILRAGNNSPC*FRRAATLASSS
Trigger: GCTACTGGATGCTAAAGTGGCCGCCCTTCGGAAGCAGCATGGGGAGTTGTTGCCTGCCCGCAAAATTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 72 bp AGCTCCTCAATTTTGCGGGCAGGCAACAACTCCCCATaGTGCTTCCGAAGGGCGGCCACTTTAGCATCCAGT +
Preference number: 6 (lower is better)
Translates to: SSSILRAGNNSP*CFRRAATLASS
Trigger: ACTGGATGCTAAAGTGGCCGCCCTTCGGAAGCAGCATGGGGAGTTGTTGCCTGCCCGCAAAATTGAGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 72 bp GCCAGCTGGTGCAGGTTCGCCTGTTCAATGTCCATGTaGCAGTCTCCATGGAACAGAAGACGGCTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: ASWCRFACSMSM*QSPWNRRRLLS
Trigger: GGACAAGAGCCGTCTTCTGTTCCATGGAGACTGGCACATGGACATTGAACAGGCGAACCTGCACCAGCTGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000577261.1
CDS GCA 72 bp CTAACCAGAGCTGTCGGCCATCCTGCTCTGTGGGGCTaGTTTCAGTGGTGGCAAAGTACTGCATGCCATCCA +
Preference number: 6 (lower is better)
Translates to: LTRAVGHPALWG*FQWWQSTACHP
Trigger: TGGATGGCATGCAGTACTTTGCCACCACTGAAAGCAGCCCCACAGAGCAGGATGGCCGACAGCTCTGGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 72 bp ATTCGGCAGTTGCAACGCGAAATGATCCGCTGGACTTaGTGGGCTTGCTGTGCCTCAGCTGGCTGGTTCCAA +
Preference number: 6 (lower is better)
Translates to: IRQLQREMIRWT*WACCASAGWFQ
Trigger: TTGGAACCAGCCAGCTGAGGCACAGCAAGCCCAGCAAGTCCAGCGGATCATTTCGCGTTGCAACTGCCGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 72 bp ACCCTTCCCAGGGCCCAGTGGTACTGCATCATCTGTTaGAATCAGCTGCCGAGGCTTCACCACTGGTATTCC +
Preference number: 6 (lower is better)
Translates to: TLPRAQWYCIIC*NQLPRLHHWYS
Trigger: GGAATACCAGTGGTGAAGCCTCGGCAGCTGATTGCAACAGATGATGCAGTACCACTGGGCCCTGGGAAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000583860.1
CDS GCA 72 bp AGTCCCTGGAGCCTGAGCCAGAGTCAGATCCTGTACTaGAGCCACTCGAATCGCCAAATCATTTGCGCCTGC +
Preference number: 6 (lower is better)
Translates to: SPWSLSQSQILY*SHSNRQIICAC
Trigger: GCAGGCGCAAATGATTTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGGCTCAGGCTCCAGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp AGTCCAGAACAAGTGCCTCACCCCAAACATGCATATTaGGTGGGTGTGGCGCCCGCTGAATGTGGGAGTCAC +
Preference number: 6 (lower is better)
Translates to: SPEQVPHPKHAY*VGVAPAECGSH
Trigger: GTGACTCCCACATTCAGCGGGCGCCACACCCACCCAATATGCATGTTTGGGGTGAGGCACTTGTTCTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp GTGATAGGTGATGGAGAGCATGGAAAGGCTGAGCACTaGGGTAGGGATGTCAGGGGCCTTGCAACAGGGTTG +
Preference number: 6 (lower is better)
Translates to: VIGDGEHGKAEH*GRDVRGLATGL
Trigger: CAACCCTGTTGCAAGGCCCCTGACATCCCTACCCCAGTGCTCAGCCTTTCCATGCTCTCCATCACCTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp GTTGCAACGCGAAATGATCCGCTGGACTTGCTGGGCTaGCTGTGCCTCAGCTGGCTGGTTCCAATCTGTGGT +
Preference number: 6 (lower is better)
Translates to: VATRNDPLDLLG*LCLSWLVPICG
Trigger: ACCACAGATTGGAACCAGCCAGCTGAGGCACAGCAAGCCCAGCAAGTCCAGCGGATCATTTCGCGTTGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp CACCCTTCCCAGGGCCCAGTGGTACTGCATCATCTGTaGCAATCAGCTGCCGAGGCTTCACCACTGGTATTC +
Preference number: 6 (lower is better)
Translates to: HPSQGPVVLHHL*QSAAEASPLVF
Trigger: GAATACCAGTGGTGAAGCCTCGGCAGCTGATTGCAACAGATGATGCAGTACCACTGGGCCCTGGGAAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000583860.1
CDS CAA 90 bp ATCACGAGCAGAGAGCTCCTCCTCAGCTGTGCGATTGCTATGCCGTaGGTAGGTGAGGGAGGACAAGCTCAGCAGGTGGGTCTTTGTTAC +
Preference number: 6 (lower is better)
Translates to: ITSRELLLSCAIAMP*VGEGGQAQQVGLCY
Trigger: GTAACAAAGACCCACCTGCTGAGCTTGTCCTCCCTCACCTACCAACGGCATAGCAATCGCACAGCTGAGGAGGAGCTCTCTGCTCGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 90 bp CATTCGGCAGTTGCAACGCGAAATGATCCGCTGGACTTGCTGGGCTaGCTGTGCCTCAGCTGGCTGGTTCCAATCTGTGGTTGTGGTAAC +
Preference number: 6 (lower is better)
Translates to: HSAVATRNDPLDLLG*LCLSWLVPICGCGN
Trigger: GTTACCACAACCACAGATTGGAACCAGCCAGCTGAGGCACAGCAAGCCCAGCAAGTCCAGCGGATCATTTCGCGTTGCAACTGCCGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 90 bp GGTCACCTGCACACTAGCCTTGAGGGAGTTGAGGCAGACAATGCGTaGGCGACTCTGGGACAACAACAACCCATCTGTAAGAGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: GHLHTSLEGVEADNA*ATLGQQQPICKRPE
Trigger: CTCTGGCCTCTTACAGATGGGTTGTTGTTGTCCCAGAGTCGCCAACGCATTGTCTGCCTCAACTCCCTCAAGGCTAGTGTGCAGGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577417.5
CDS TCA 72 bp TCCGTGACTGATTTCACCAGCGCTAACACAAGTCCTTaGATCCCCACAGTGGACGTCTCTGCACTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: SVTDFTSANTSP*IPTVDVSALPR
Trigger: CCTGGGCAGTGCAGAGACGTCCACTGTGGGGATTCAAGGACTTGTGTTAGCGCTGGTGAAATCAGTCACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 72 bp ACAGTATGCCTGCAGGGAACCTCCATGCCGGCTCAGTaGCACACTCTCTGCAGCCAGGGTAATGAACTTGTC +
Preference number: 6 (lower is better)
Translates to: TVCLQGTSMPAQ*HTLCSQGNELV
Trigger: GACAAGTTCATTACCCTGGCTGCAGAGAGTGTGTCACTGAGCCGGCATGGAGGTTCCCTGCAGGCATACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 72 bp CCTCCTCAGCTGTGCGATTGCTATGCCGTTGGTAGGTaGGGGAGGACAAGCTCAGCAGGTGGGTCTTTGTTA +
Preference number: 6 (lower is better)
Translates to: PPQLCDCYAVGR*GRTSSAGGSLL
Trigger: TAACAAAGACCCACCTGCTGAGCTTGTCCTCCCTCACCTACCAACGGCATAGCAATCGCACAGCTGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 72 bp TCCACTGAAGCTGGGAGTGTTAACACGAGGTGGGGCTaGGGCACTAGTTGGGACACCCCGCTTTGGCTTTTT +
Preference number: 6 (lower is better)
Translates to: STEAGSVNTRWG*GTSWDTPLWLF
Trigger: AAAAAGCCAAAGCGGGGTGTCCCAACTAGTGCCTCAGCCCCACCTCGTGTTAACACTCCCAGCTTCAGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 72 bp CTCTCCATCAGCTCCTGCACAGAGTCCAGACTACGCTaGCGGTGCTCCTCGATATTCTTCACCTCTAACCAG +
Preference number: 6 (lower is better)
Translates to: LSISSCTESRLR*RCSSIFFTSNQ
Trigger: CTGGTTAGAGGTGAAGAATATCGAGGAGCACCGGCAGCGTAGTCTGGACTCTGTGCAGGAGCTGATGGAGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 72 bp ATTTGGGCCACATGCTGCCGCACAGCCTCCTGCAAATaGAGTATGCTGCTGCGTTGCTCCTCTGGATTGCTA +
Preference number: 6 (lower is better)
Translates to: IWATCCRTASCK*SMLLRCSSGLL
Trigger: TAGCAATCCAGAGGAGCAACGCAGCAGCATACTGCATTTGCAGGAGGCTGTGCGGCAGCATGTGGCCCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS GCA 72 bp ATCTGCTTCTCCAGCTGTCGTATTTGGGCCACATGCTaGCGCACAGCCTCCTGCAAATGCAGTATGCTGCTG +
Preference number: 6 (lower is better)
Translates to: ICFSSCRIWATC*RTASCKCSMLL
Trigger: CAGCAGCATACTGCATTTGCAGGAGGCTGTGCGGCAGCATGTGGCCCAAATACGACAGCTGGAGAAGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS GCA 72 bp GGGCCCAGTGGTACTGCATCATCTGTTGCAATCAGCTaGCGAGGCTTCACCACTGGTATTCCAGTAGTCACC +
Preference number: 6 (lower is better)
Translates to: GPSGTASSVAIS*RGFTTGIPVVT
Trigger: GGTGACTACTGGAATACCAGTGGTGAAGCCTCGGCAGCTGATTGCAACAGATGATGCAGTACCACTGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000583860.1
CDS CCA 72 bp GCTGGATCCCAGCATGGGCCCCACACCACTGTGTACTaGAATATTTCCGCTGGGGTAGAGGAACAAAGGCTA +
Preference number: 6 (lower is better)
Translates to: AGSQHGPHTTVY*NISAGVEEQRL
Trigger: TAGCCTTTGTTCCTCTACCCCAGCGGAAATATTCCAGTACACAGTGGTGTGGGGCCCATGCTGGGATCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581064.1
CDS CAA 72 bp TTGCGCCTGCCAAAGATGGACTTCTTGCCAGGGTTCTaGTCGCCCACACTTAAACCAATGAGGAGCCGGGCT +
Preference number: 6 (lower is better)
Translates to: LRLPKMDFLPGF*SPTLKPMRSRA
Trigger: AGCCCGGCTCCTCATTGGTTTAAGTGTGGGCGACAAGAACCCTGGCAAGAAGTCCATCTTTGGCAGGCGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 90 bp GCAGCCAGGGTAATGAACTTGTCCTCAGCTACAAAAGCTGTGAGCTaGGCTGTGCTCACCTCCAGGGTTAGGTTTAGCAGCCGCTTTGGG +
Preference number: 6 (lower is better)
Translates to: AARVMNLSSATKAVS*AVLTSRVRFSSRFG
Trigger: CCCAAAGCGGCTGCTAAACCTAACCCTGGAGGTGAGCACAGCCAAGCTCACAGCTTTTGTAGCTGAGGACAAGTTCATTACCCTGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 90 bp CCAGAGTCAGATCCTGTACTGCAGCCACTCGAATCGCCAAATCATTaGCGCCTGCCAAAGATGGACTTCTTGCCAGGGTTCTTGTCGCCC +
Preference number: 6 (lower is better)
Translates to: PESDPVLQPLESPNH*RLPKMDFLPGFLSP
Trigger: GGGCGACAAGAACCCTGGCAAGAAGTCCATCTTTGGCAGGCGCAAATGATTTGGCGATTCGAGTGGCTGCAGTACAGGATCTGACTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 72 bp CAGGGGCATGTTTGGTACCTCTGGCGATTTGCGAAATaGCCTTCTGACCCCAGAACTCCGAGTCAAACCCTG +
Preference number: 6 (lower is better)
Translates to: QGHVWYLWRFAK*PSDPRTPSQTL
Trigger: CAGGGTTTGACTCGGAGTTCTGGGGTCAGAAGGTCATTTCGCAAATCGCCAGAGGTACCAAACATGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583860.1
CDS GCA 72 bp ATCAGCTCCTGCACAGAGTCCAGACTACGCTGCCGGTaGTCCTCGATATTCTTCACCTCTAACCAGAGCTGT +
Preference number: 6 (lower is better)
Translates to: ISSCTESRLRCR*SSIFFTSNQSC
Trigger: ACAGCTCTGGTTAGAGGTGAAGAATATCGAGGAGCACCGGCAGCGTAGTCTGGACTCTGTGCAGGAGCTGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 72 bp CGCACAGCCTCCTGCAAATGCAGTATGCTGCTGCGTTaGTCCTCTGGATTGCTAGAGATCTCAAGCTGGAAC +
Preference number: 6 (lower is better)
Translates to: RTASCKCSMLLR*SSGLLEISSWN
Trigger: GTTCCAGCTTGAGATCTCTAGCAATCCAGAGGAGCAACGCAGCAGCATACTGCATTTGCAGGAGGCTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS GCA 72 bp TACATCTGCTTCTCCAGCTGTCGTATTTGGGCCACATaGTGCCGCACAGCCTCCTGCAAATGCAGTATGCTG +
Preference number: 6 (lower is better)
Translates to: YICFSSCRIWAT*CRTASCKCSML
Trigger: CAGCATACTGCATTTGCAGGAGGCTGTGCGGCAGCATGTGGCCCAAATACGACAGCTGGAGAAGCAGATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS GCA 72 bp TCAGGCGCCACCGTGCCTGAGCAAAGTAAAACTCAGTaGGACGGACCACACTCACATCTTCTTGCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: SGATVPEQSKTQ*DGPHSHLLAAF
Trigger: GAAAGCAGCAAGAAGATGTGAGTGTGGTCCGTCGCACTGAGTTTTACTTTGCTCAGGCACGGTGGCGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000579924.6
ENST00000580395.1
CDS CCA 72 bp AGGTTCGCCTGTTCAATGTCCATGTGCCAGTCTCCATaGAACAGAAGACGGCTCTTGTCCCACCAGGGCAAA +
Preference number: 6 (lower is better)
Translates to: RFACSMSMCQSP*NRRRLLSHQGK
Trigger: TTTGCCCTGGTGGGACAAGAGCCGTCTTCTGTTCCATGGAGACTGGCACATGGACATTGAACAGGCGAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000577261.1
CDS CCA 72 bp TGCTTCAATGTATCACCATACCAGGCTGGATGGTGCTaGCACTGCAGCAGTTGGGCTTTGGCAGCTGACACA +
Preference number: 6 (lower is better)
Translates to: CFNVSPYQAGWC*HCSSWALAADT
Trigger: TGTGTCAGCTGCCAAAGCCCAACTGCTGCAGTGCCAGCACCATCCAGCCTGGTATGGTGATACATTGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp CTCCTGCAAATGCAGTATGCTGCTGCGTTGCTCCTCTaGATTGCTAGAGATCTCAAGCTGGAACCTGACCCG +
Preference number: 6 (lower is better)
Translates to: LLQMQYAAALLL*IARDLKLEPDP
Trigger: CGGGTCAGGTTCCAGCTTGAGATCTCTAGCAATCCAGAGGAGCAACGCAGCAGCATACTGCATTTGCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS CCA 72 bp TTGAGGGAGTTGAGGCAGACAATGCGTTGGCGACTCTaGGACAACAACAACCCATCTGTAAGAGGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: LRELRQTMRWRL*DNNNPSVRGQR
Trigger: CCTCTGGCCTCTTACAGATGGGTTGTTGTTGTCCCAGAGTCGCCAACGCATTGTCTGCCTCAACTCCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577417.5
CDS CAA 72 bp ATTACCTGGGCAACCAGGGCTTTGCGGCTGTCCCTTTaGACAGCCATGGCAAAGTCTAGCCATGTCCATGTG +
Preference number: 6 (lower is better)
Translates to: ITWATRALRLSL*TAMAKSSHVHV
Trigger: CACATGGACATGGCTAGACTTTGCCATGGCTGTCAAAAGGGACAGCCGCAAAGCCCTGGTTGCCCAGGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 90 bp TCAGGTAGCAGCTGCACCTCCACCTCCTTGAAGTTGAAGATACTATaGCCATCAAAGCCAGCAGCCAGCTCTGGACAGTATGCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: SGSSCTSTSLKLKIL*PSKPAASSGQYACR
Trigger: CCTGCAGGCATACTGTCCAGAGCTGGCTGCTGGCTTTGATGGCAATAGTATCTTCAACTTCAAGGAGGTGGAGGTGCAGCTGCTACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 90 bp TCCCTTTTGACAGCCATGGCAAAGTCTAGCCATGTCCATGTGTTGTaGTGGTACTCCAGACAGGGCAGCACCAGGTTAAGGTCACCCCAG +
Preference number: 6 (lower is better)
Translates to: SLLTAMAKSSHVHVL*WYSRQGSTRLRSPQ
Trigger: CTGGGGTGACCTTAACCTGGTGCTGCCCTGTCTGGAGTACCACAACAACACATGGACATGGCTAGACTTTGCCATGGCTGTCAAAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 90 bp CCAAATCATTTGCGCCTGCCAAAGATGGACTTCTTGCCAGGGTTCTaGTCGCCCACACTTAAACCAATGAGGAGCCGGGCTTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: PNHLRLPKMDFLPGF*SPTLKPMRSRAFSS
Trigger: GGAGGAGAAAGCCCGGCTCCTCATTGGTTTAAGTGTGGGCGACAAGAACCCTGGCAAGAAGTCCATCTTTGGCAGGCGCAAATGATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 90 bp CCACTCGAATCGCCAAATCATTTGCGCCTGCCAAAGATGGACTTCTaGCCAGGGTTCTTGTCGCCCACACTTAAACCAATGAGGAGCCGG +
Preference number: 6 (lower is better)
Translates to: PLESPNHLRLPKMDF*PGFLSPTLKPMRSR
Trigger: CCGGCTCCTCATTGGTTTAAGTGTGGGCGACAAGAACCCTGGCAAGAAGTCCATCTTTGGCAGGCGCAAATGATTTGGCGATTCGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 72 bp AATGTCATCCACAGGGTGCTCTGGCGATTTGCGAAATaGCCTTCTGACCCCAGAACTCCGAGTCAAACCCTG +
Preference number: 6 (lower is better)
Translates to: NVIHRVLWRFAK*PSDPRTPSQTL
Trigger: CAGGGTTTGACTCGGAGTTCTGGGGTCAGAAGGTCATTTCGCAAATCGCCAGAGCACCCTGTGGATGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 72 bp TGTTTGGTACCTCTGGCGATTTGCGAAATGACCTTCTaGCCCCAGAACTCCGAGTCAAACCCTGTGCCACAC +
Preference number: 6 (lower is better)
Translates to: CLVPLAICEMTF*PQNSESNPVPH
Trigger: GTGTGGCACAGGGTTTGACTCGGAGTTCTGGGGTCAGAAGGTCATTTCGCAAATCGCCAGAGGTACCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583860.1
CDS GCA 72 bp TCCCCTGCAGATAGGCCTTGTGACACTTGTCCAAGTTaGCCAGAAGTTTTGCATCCAGCGCAGGGTACTACT +
Preference number: 6 (lower is better)
Translates to: SPADRPCDTCPS*PEVLHPAQGTT
Trigger: AGTAGTACCCTGCGCTGGATGCAAAACTTCTGGGCAACTTGGACAAGTGTCACAAGGCCTATCTGCAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000577261.1
ENST00000582417.1
CDS GCA 72 bp TTTTGCTTCAATGTATCACCATACCAGGCTGGATGGTaGTGGCACTGCAGCAGTTGGGCTTTGGCAGCTGAC +
Preference number: 6 (lower is better)
Translates to: FCFNVSPYQAGW*WHCSSWALAAD
Trigger: GTCAGCTGCCAAAGCCCAACTGCTGCAGTGCCAGCACCATCCAGCCTGGTATGGTGATACATTGAAGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 72 bp CTGTGGGGCTGCTTTCAGTGGTGGCAAAGTACTGCATaGCATCCAAGAGGCAAGTCCAGGATGTCTTTTGCT +
Preference number: 6 (lower is better)
Translates to: LWGCFQWWQSTA*HPRGKSRMSFA
Trigger: AGCAAAAGACATCCTGGACTTGCCTCTTGGATGGCATGCAGTACTTTGCCACCACTGAAAGCAGCCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 72 bp TACTGCAGCCACTCGAATCGCCAAATCATTTGCGCCTaGCAAAGATGGACTTCTTGCCAGGGTTCTTGTCGC +
Preference number: 6 (lower is better)
Translates to: YCSHSNRQIICA*QRWTSCQGSCR
Trigger: GCGACAAGAACCCTGGCAAGAAGTCCATCTTTGGCAGGCGCAAATGATTTGGCGATTCGAGTGGCTGCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 72 bp AAGTCACCCTTGAACACAAACTCAGTGGCCAGCTGGTaGAGGTTCGCCTGTTCAATGTCCATGTGCCAGTCT +
Preference number: 6 (lower is better)
Translates to: KSPLNTNSVASW*RFACSMSMCQS
Trigger: AGACTGGCACATGGACATTGAACAGGCGAACCTGCACCAGCTGGCCACTGAGTTTGTGTTCAAGGGTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577261.1
CDS CCA 72 bp ACACAGTGGCTCTTAGTAGGTCTCGGCACTGTAGAGTaGCCAGGACATGCTGGTACAGGTACATGTGATCTG +
Preference number: 6 (lower is better)
Translates to: TQWLLVGLGTVE*PGHAGTGTCDL
Trigger: CAGATCACATGTACCTGTACCAGCATGTCCTGGCCACTCTACAGTGCCGAGACCTACTAAGAGCCACTGTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp GTCTTTTGCTTCAATGTATCACCATACCAGGCTGGATaGTGCTGGCACTGCAGCAGTTGGGCTTTGGCAGCT +
Preference number: 6 (lower is better)
Translates to: VFCFNVSPYQAG*CWHCSSWALAA
Trigger: AGCTGCCAAAGCCCAACTGCTGCAGTGCCAGCACCATCCAGCCTGGTATGGTGATACATTGAAGCAAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp GCCATGGCAAAGTCTAGCCATGTCCATGTGTTGTTGTaGTACTCCAGACAGGGCAGCACCAGGTTAAGGTCA +
Preference number: 6 (lower is better)
Translates to: AMAKSSHVHVLL*YSRQGSTRLRS
Trigger: TGACCTTAACCTGGTGCTGCCCTGTCTGGAGTACCACAACAACACATGGACATGGCTAGACTTTGCCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp AGCTCAGGTAGCAGCTGCACCTCCACCTCCTTGAAGTaGAAGATACTATTGCCATCAAAGCCAGCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: SSGSSCTSTSLK*KILLPSKPAAS
Trigger: GCTGGCTGCTGGCTTTGATGGCAATAGTATCTTCAACTTCAAGGAGGTGGAGGTGCAGCTGCTACCTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp TGCAAATGCAGTATGCTGCTGCGTTGCTCCTCTGGATaGCTAGAGATCTCAAGCTGGAACCTGACCCGTTGC +
Preference number: 6 (lower is better)
Translates to: CKCSMLLRCSSG*LEISSWNLTRC
Trigger: GCAACGGGTCAGGTTCCAGCTTGAGATCTCTAGCAATCCAGAGGAGCAACGCAGCAGCATACTGCATTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS CAA 72 bp GTAAAACTCAGTGCGACGGACCACACTCACATCTTCTaGCTGCTTTCGCAGCTCCATCTTGTTAGCCCGCTG +
Preference number: 6 (lower is better)
Translates to: VKLSATDHTHIF*LLSQLHLVSPL
Trigger: CAGCGGGCTAACAAGATGGAGCTGCGAAAGCAGCAAGAAGATGTGAGTGTGGTCCGTCGCACTGAGTTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000579924.6
ENST00000580395.1
CDS CAA 72 bp ACAGCCATGGCAAAGTCTAGCCATGTCCATGTGTTGTaGTGGTACTCCAGACAGGGCAGCACCAGGTTAAGG +
Preference number: 6 (lower is better)
Translates to: TAMAKSSHVHVL*WYSRQGSTRLR
Trigger: CCTTAACCTGGTGCTGCCCTGTCTGGAGTACCACAACAACACATGGACATGGCTAGACTTTGCCATGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp GATCCTGTACTGCAGCCACTCGAATCGCCAAATCATTaGCGCCTGCCAAAGATGGACTTCTTGCCAGGGTTC +
Preference number: 6 (lower is better)
Translates to: DPVLQPLESPNH*RLPKMDFLPGF
Trigger: GAACCCTGGCAAGAAGTCCATCTTTGGCAGGCGCAAATGATTTGGCGATTCGAGTGGCTGCAGTACAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp CACACTAGCCTTGAGGGAGTTGAGGCAGACAATGCGTaGGCGACTCTGGGACAACAACAACCCATCTGTAAG +
Preference number: 6 (lower is better)
Translates to: HTSLEGVEADNA*ATLGQQQPICK
Trigger: CTTACAGATGGGTTGTTGTTGTCCCAGAGTCGCCAACGCATTGTCTGCCTCAACTCCCTCAAGGCTAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577417.5
CDS CAA 90 bp AATATAGTACATTCGGCAGTTGCAACGCGAAATGATCCGCTGGACTaGCTGGGCTTGCTGTGCCTCAGCTGGCTGGTTCCAATCTGTGGT +
Preference number: 6 (lower is better)
Translates to: NIVHSAVATRNDPLD*LGLLCLSWLVPICG
Trigger: ACCACAGATTGGAACCAGCCAGCTGAGGCACAGCAAGCCCAGCAAGTCCAGCGGATCATTTCGCGTTGCAACTGCCGAATGTACTATATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 90 bp ACAGCCTCCTGCAAATGCAGTATGCTGCTGCGTTGCTCCTCTGGATaGCTAGAGATCTCAAGCTGGAACCTGACCCGTTGCTTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: TASCKCSMLLRCSSG*LEISSWNLTRCFFS
Trigger: TGAGAAGAAGCAACGGGTCAGGTTCCAGCTTGAGATCTCTAGCAATCCAGAGGAGCAACGCAGCAGCATACTGCATTTGCAGGAGGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS CAA 90 bp CGACGGACCACACTCACATCTTCTTGCTGCTTTCGCAGCTCCATCTaGTTAGCCCGCTGCAGTTGGAAATCCTTAAAACACCTGATGAGG +
Preference number: 6 (lower is better)
Translates to: RRTTLTSSCCFRSSI*LARCSWKSLKHLMR
Trigger: CCTCATCAGGTGTTTTAAGGATTTCCAACTGCAGCGGGCTAACAAGATGGAGCTGCGAAAGCAGCAAGAAGATGTGAGTGTGGTCCGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000579924.6
ENST00000580395.1
CDS CAA 90 bp TTCTCTTTGATTACCTGGGCAACCAGGGCTTTGCGGCTGTCCCTTTaGACAGCCATGGCAAAGTCTAGCCATGTCCATGTGTTGTTGTGG +
Preference number: 6 (lower is better)
Translates to: FSLITWATRALRLSL*TAMAKSSHVHVLLW
Trigger: CCACAACAACACATGGACATGGCTAGACTTTGCCATGGCTGTCAAAAGGGACAGCCGCAAAGCCCTGGTTGCCCAGGTAATCAAAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 72 bp TGTCAGGGGCCTTGCAACAGGGTTGCATCTTCTCCGTaGCTGATTTCACCAGCGCTAACACAAGTCCTTGAA +
Preference number: 6 (lower is better)
Translates to: CQGPCNRVASSP*LISPALTQVLE
Trigger: TTCAAGGACTTGTGTTAGCGCTGGTGAAATCAGTCACGGAGAAGATGCAACCCTGTTGCAAGGCCCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 72 bp AGCAGGTGGGTCTTTGTTACCAAGGGATCAAGACAGTaGTCAGCATTCTCTTCAGTGGGTGAGGCCATCAGG +
Preference number: 6 (lower is better)
Translates to: SRWVFVTKGSRQ*SAFSSVGEAIR
Trigger: CCTGATGGCCTCACCCACTGAAGAGAATGCTGATCACTGTCTTGATCCCTTGGTAACAAAGACCCACCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000577261.1
CDS GCA 72 bp ATCCTGTACTGCAGCCACTCGAATCGCCAAATCATTTaGGCCTGCCAAAGATGGACTTCTTGCCAGGGTTCT +
Preference number: 6 (lower is better)
Translates to: ILYCSHSNRQII*ACQRWTSCQGS
Trigger: AGAACCCTGGCAAGAAGTCCATCTTTGGCAGGCGCAAATGATTTGGCGATTCGAGTGGCTGCAGTACAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp CCAAGGGATCAAGACAGTGATCAGCATTCTCTTCAGTaGGTGAGGCCATCAGGTGAACGGTCACCTGACTTA +
Preference number: 6 (lower is better)
Translates to: PRDQDSDQHSLQ*VRPSGERSPDL
Trigger: TAAGTCAGGTGACCGTTCACCTGATGGCCTCACCCACTGAAGAGAATGCTGATCACTGTCTTGATCCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000577261.1
CDS CCA 72 bp CTGCGTTGCTCCTCTGGATTGCTAGAGATCTCAAGCTaGAACCTGACCCGTTGCTTCTTCTCACTATGTTCC +
Preference number: 6 (lower is better)
Translates to: LRCSSGLLEISS*NLTRCFFSLCS
Trigger: GGAACATAGTGAGAAGAAGCAACGGGTCAGGTTCCAGCTTGAGATCTCTAGCAATCCAGAGGAGCAACGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS CCA 72 bp ATGATAGAATACATCTGCTTCTCCAGCTGTCGTATTTaGGCCACATGCTGCCGCACAGCCTCCTGCAAATGC +
Preference number: 6 (lower is better)
Translates to: MIEYICFSSCRI*ATCCRTASCKC
Trigger: GCATTTGCAGGAGGCTGTGCGGCAGCATGTGGCCCAAATACGACAGCTGGAGAAGCAGATGTATTCTATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS CCA 72 bp CACTCGAATCGCCAAATCATTTGCGCCTGCCAAAGATaGACTTCTTGCCAGGGTTCTTGTCGCCCACACTTA +
Preference number: 6 (lower is better)
Translates to: HSNRQIICACQR*TSCQGSCRPHL
Trigger: TAAGTGTGGGCGACAAGAACCCTGGCAAGAAGTCCATCTTTGGCAGGCGCAAATGATTTGGCGATTCGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp AAGACAGGTGGCTCCACTCCCAGTGCATATTTTCAGTaGTGTTGTATGGATCCTCAGTGGCCAGCTGGTGCA +
Preference number: 6 (lower is better)
Translates to: KTGGSTPSAYFQ*CCMDPQWPAGA
Trigger: TGCACCAGCTGGCCACTGAGGATCCATACAACACAACTGAAAATATGCACTGGGAGTGGAGCCACCTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp TGGGATATTGTTCCACTGTGCCGAGTCAGATCCATCTaGATGGAGAGATTGAGGTTCTCCGAGCGAAAGGCC +
Preference number: 6 (lower is better)
Translates to: WDIVPLCRVRSI*MERLRFSERKA
Trigger: GGCCTTTCGCTCGGAGAACCTCAATCTCTCCATCAAGATGGATCTGACTCGGCACAGTGGAACAATATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000577261.1
ENST00000582417.1
CDS CAA 72 bp CATGATAGAATACATCTGCTTCTCCAGCTGTCGTATTaGGGCCACATGCTGCCGCACAGCCTCCTGCAAATG +
Preference number: 6 (lower is better)
Translates to: HDRIHLLLQLSY*GHMLPHSLLQM
Trigger: CATTTGCAGGAGGCTGTGCGGCAGCATGTGGCCCAAATACGACAGCTGGAGAAGCAGATGTATTCTATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS CAA 72 bp TCTATCATCAGGGGCATGTTTGGTACCTCTGGCGATTaGCGAAATGACCTTCTGACCCCAGAACTCCGAGTC +
Preference number: 6 (lower is better)
Translates to: SIIRGMFGTSGD*RNDLLTPELRV
Trigger: GACTCGGAGTTCTGGGGTCAGAAGGTCATTTCGCAAATCGCCAGAGGTACCAAACATGCCCCTGATGATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583860.1
CDS TCA 72 bp AGAAAAGTCATACTGATAAGGAAACTCCACCGAGACTaGGCCGAAAGAGAGGAGCCAAACACGGTTCCGGAG +
Preference number: 6 (lower is better)
Translates to: RKVILIRKLHRD*AEREEPNTVPE
Trigger: CTCCGGAACCGTGTTTGGCTCCTCTCTTTCGGCTCAGTCTCGGTGGAGTTTCCTTATCAGTATGACTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 72 bp AGCAGGTTGTTGACAATGTCCAGGATCATGGCATACTaGGCTGGGTTGGTGGAAATTTCCAGCTCATGGTGG +
Preference number: 6 (lower is better)
Translates to: SRLLTMSRIMAY*AGLVEISSSWW
Trigger: CCACCATGAGCTGGAAATTTCCACCAACCCAGCTCAGTATGCCATGATCCTGGACATTGTCAACAACCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 72 bp AGCTGCAGGTTGGCCTTCTCCTGGTTTAGCTGCAACTaGAGCTTCTGGTTCAGGTCAAGCAGATTCTCATTC +
Preference number: 6 (lower is better)
Translates to: SCRLAFSWFSCN*SFWFRSSRFSF
Trigger: GAATGAGAATCTGCTTGACCTGAACCAGAAGCTTCAGTTGCAGCTAAACCAGGAGAAGGCCAACCTGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000579924.6
ENST00000580395.1
CDS GCA 72 bp GAATGGTACAATCAAGAAAAAGGGTATCTGACTGGGTaGTGGACAGGCCCAGAGGCTGGTTATAGCTACCCT +
Preference number: 6 (lower is better)
Translates to: EWYNQEKGYLTG*WTGPEAGYSYP
Trigger: AGGGTAGCTATAACCAGCCTCTGGGCCTGTCCAGCACCCAGTCAGATACCCTTTTTCTTGATTGTACCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 72 bp TTCGGTTGTATATGTCATCCGTCTGGCAGGCAGCAATaGCACACAACTGGTCACTCATGCCTGATTCCTCTT +
Preference number: 6 (lower is better)
Translates to: FGCICHPSGRQQ*HTTGHSCLIPL
Trigger: AAGAGGAATCAGGCATGAGTGACCAGTTGTGTGGCATTGCTGCCTGCCAGACGGATGACATATACAACCGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 72 bp TGCATGCCATCCAAGAGGCAAGTCCAGGATGTCTTTTaGTTCAATGTATCACCATACCAGGCTGGATGGTGC +
Preference number: 6 (lower is better)
Translates to: CMPSKRQVQDVF*FNVSPYQAGWC
Trigger: GCACCATCCAGCCTGGTATGGTGATACATTGAAGCAAAAGACATCCTGGACTTGCCTCTTGGATGGCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp TGGTACAATCAAGAAAAAGGGTATCTGACTGGGTGCTaGACAGGCCCAGAGGCTGGTTATAGCTACCCTGTA +
Preference number: 6 (lower is better)
Translates to: WYNQEKGYLTGC*TGPEAGYSYPV
Trigger: TACAGGGTAGCTATAACCAGCCTCTGGGCCTGTCCAGCACCCAGTCAGATACCCTTTTTCTTGATTGTACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp TCTCTACTCACAGTGAAAGTCATGGTAGAATTTGAGTaGGGGCATGTTCCTCTCCACTGCCACGTTACCCCA +
Preference number: 6 (lower is better)
Translates to: SLLTVKVMVEFE*GHVPLHCHVTP
Trigger: TGGGGTAACGTGGCAGTGGAGAGGAACATGCCCCCACTCAAATTCTACCATGACTTTCACTGTGAGTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581064.1
CDS CAA 72 bp GTAATGAACTTGTCCTCAGCTACAAAAGCTGTGAGCTaGGCTGTGCTCACCTCCAGGGTTAGGTTTAGCAGC +
Preference number: 6 (lower is better)
Translates to: VMNLSSATKAVS*AVLTSRVRFSS
Trigger: GCTGCTAAACCTAACCCTGGAGGTGAGCACAGCCAAGCTCACAGCTTTTGTAGCTGAGGACAAGTTCATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp TCTTCCAGCTCAGGTAGCAGCTGCACCTCCACCTCCTaGAAGTTGAAGATACTATTGCCATCAAAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: SSSSGSSCTSTS*KLKILLPSKPA
Trigger: TGCTGGCTTTGATGGCAATAGTATCTTCAACTTCAAGGAGGTGGAGGTGCAGCTGCTACCTGAGCTGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp CTGCATGCCATCCAAGAGGCAAGTCCAGGATGTCTTTaGCTTCAATGTATCACCATACCAGGCTGGATGGTG +
Preference number: 6 (lower is better)
Translates to: LHAIQEASPGCL*LQCITIPGWMV
Trigger: CACCATCCAGCCTGGTATGGTGATACATTGAAGCAAAAGACATCCTGGACTTGCCTCTTGGATGGCATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp TCGCCAAATCATTTGCGCCTGCCAAAGATGGACTTCTaGCCAGGGTTCTTGTCGCCCACACTTAAACCAATG +
Preference number: 6 (lower is better)
Translates to: SPNHLRLPKMDF*PGFLSPTLKPM
Trigger: CATTGGTTTAAGTGTGGGCGACAAGAACCCTGGCAAGAAGTCCATCTTTGGCAGGCGCAAATGATTTGGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 90 bp CAAAGACTTCATGATAGAATACATCTGCTTCTCCAGCTGTCGTATTaGGGCCACATGCTGCCGCACAGCCTCCTGCAAATGCAGTATGCT +
Preference number: 6 (lower is better)
Translates to: QRLHDRIHLLLQLSY*GHMLPHSLLQMQYA
Trigger: AGCATACTGCATTTGCAGGAGGCTGTGCGGCAGCATGTGGCCCAAATACGACAGCTGGAGAAGCAGATGTATTCTATCATGAAGTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS TCA 72 bp GCAGGCAGCAATGCCACACAACTGGTCACTCATGCCTaGTTCCTCTTCTGTGAACACTACAAACCTATCTGT +
Preference number: 6 (lower is better)
Translates to: AGSNATQLVTHA*FLFCEHYKPIC
Trigger: ACAGATAGGTTTGTAGTGTTCACAGAAGAGGAATCAGGCATGAGTGACCAGTTGTGTGGCATTGCTGCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS GCA 72 bp GGATTGCTAGAGATCTCAAGCTGGAACCTGACCCGTTaGTTCTTCTCACTATGTTCCTTCCGCTTAGGTTCT +
Preference number: 6 (lower is better)
Translates to: GLLEISSWNLTR*FFSLCSFRLGS
Trigger: AGAACCTAAGCGGAAGGAACATAGTGAGAAGAAGCAACGGGTCAGGTTCCAGCTTGAGATCTCTAGCAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp GAATATTTCCGAGTGAAAGTCATGGTAGAATTTGAGTaGGGGCATGTTCCTCTCCACTGCCACGTTACCCCA +
Preference number: 6 (lower is better)
Translates to: EYFRVKVMVEFE*GHVPLHCHVTP
Trigger: TGGGGTAACGTGGCAGTGGAGAGGAACATGCCCCCACTCAAATTCTACCATGACTTTCACTCGGAAATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp TCAATAAGGCAGTTTCGGTTGTATATGTCATCCGTCTaGCAGGCAGCAATGCCACACAACTGGTCACTCATG +
Preference number: 6 (lower is better)
Translates to: SIRQFRLYMSSV*QAAMPHNWSLM
Trigger: CATGAGTGACCAGTTGTGTGGCATTGCTGCCTGCCAGACGGATGACATATACAACCGAAACTGCCTTATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp TGGGCCCCACACCACTGTGTACTGGAATATTTCCGCTaGGGTAGAGGAACAAAGGCTATAACTTGTTCACAA +
Preference number: 6 (lower is better)
Translates to: WAPHHCVLEYFR*GRGTKAITCSQ
Trigger: TTGTGAACAAGTTATAGCCTTTGTTCCTCTACCCCAGCGGAAATATTCCAGTACACAGTGGTGTGGGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581064.1
CDS CAA 72 bp TGGATTGCTAGAGATCTCAAGCTGGAACCTGACCCGTaGCTTCTTCTCACTATGTTCCTTCCGCTTAGGTTC +
Preference number: 6 (lower is better)
Translates to: WIARDLKLEPDP*LLLTMFLPLRF
Trigger: GAACCTAAGCGGAAGGAACATAGTGAGAAGAAGCAACGGGTCAGGTTCCAGCTTGAGATCTCTAGCAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp ATGAAGGAGTTGTTCATGGCAGCTCGCTCTTTCATCTaGTCAATGTCATCCACAGGGTGCTCTGGCGATTTG +
Preference number: 6 (lower is better)
Translates to: MKELFMAARSFI*SMSSTGCSGDL
Trigger: CAAATCGCCAGAGCACCCTGTGGATGACATTGACAAGATGAAAGAGCGAGCTGCCATGAACAACTCCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp AGGTGGCTCCACTCCCAGTGCATATTTTCAGTTGTGTaGTATGGATCCTATGACCACCCCCGAGAATTTGGT +
Preference number: 6 (lower is better)
Translates to: RWLHSQCIFSVV*YGSYDHPREFG
Trigger: ACCAAATTCTCGGGGGTGGTCATAGGATCCATACAACACAACTGAAAATATGCACTGGGAGTGGAGCCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582417.1
CDS CAA 72 bp AAGACAGGTGGCTCCACTCCCAGTGCATATTTTCAGTaGTGTTGTATGGATCCTATGACCACCCCCGAGAAT +
Preference number: 6 (lower is better)
Translates to: KTGGSTPSAYFQ*CCMDPMTTPEN
Trigger: ATTCTCGGGGGTGGTCATAGGATCCATACAACACAACTGAAAATATGCACTGGGAGTGGAGCCACCTGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582417.1
CDS TCA 72 bp AAGCTCTTGACATTGCACTTGAGCATTCGACACCACTaGATGACAAGATCTAATCCCTCAGGGGGAAAAGGG +
Preference number: 6 (lower is better)
Translates to: KLLTLHLSIRHH*MTRSNPSGGKG
Trigger: CCCTTTTCCCCCTGAGGGATTAGATCTTGTCATTCAGTGGTGTCGAATGCTCAAGTGCAATGTCAAGAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000581064.1
CDS TCA 72 bp ACTGGAATATTTCCGAGTGAAAGTCATGGTAGAATTTaGGTGGGGGCATGTTCCTCTCCACTGCCACGTTAC +
Preference number: 6 (lower is better)
Translates to: TGIFPSESHGRI*VGACSSPLPRY
Trigger: GTAACGTGGCAGTGGAGAGGAACATGCCCCCACTCAAATTCTACCATGACTTTCACTCGGAAATATTCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 72 bp TCCCATCTTCTGTGTCAGGAGAGACCTCACCTCTTTTaGCTATTCATGGACAATACCACGCTTGTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: SHLLCQERPHLF*LFMDNTTLVFS
Trigger: GGAGAACACAAGCGTGGTATTGTCCATGAATAGTCAAAAGAGGTGAGGTCTCTCCTGACACAGAAGATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579253.1
CDS GCA 72 bp GGCCTTGTGACACTTGTCCAAGTTGCCCAGAAGTTTTaGATCCAGCGCAGGGTACTACTATATAGCAGAATT +
Preference number: 6 (lower is better)
Translates to: GLVTLVQVAQKF*IQRRVLLYSRI
Trigger: AATTCTGCTATATAGTAGTACCCTGCGCTGGATGCAAAACTTCTGGGCAACTTGGACAAGTGTCACAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000577261.1
ENST00000582417.1
CDS GCA 72 bp CTGTCATCCTGCAAAGACTTCATGATAGAATACATCTaGTTCTCCAGCTGTCGTATTTGGGCCACATGCTGC +
Preference number: 6 (lower is better)
Translates to: LSSCKDFMIEYI*FSSCRIWATCC
Trigger: GCAGCATGTGGCCCAAATACGACAGCTGGAGAAGCAGATGTATTCTATCATGAAGTCTTTGCAGGATGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000580395.1
CDS GCA 72 bp TCTTGCTGCTTTCGCAGCTCCATCTTGTTAGCCCGCTaGAGTTGGAAATCCTTAAAACACCTGATGAGGATA +
Preference number: 6 (lower is better)
Translates to: SCCFRSSILLAR*SWKSLKHLMRI
Trigger: TATCCTCATCAGGTGTTTTAAGGATTTCCAACTGCAGCGGGCTAACAAGATGGAGCTGCGAAAGCAGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000579924.6
ENST00000580395.1
CDS GCA 72 bp CAGCTGCCTTTGTGTGACCATATACCCCAGATACCTTaGTGTAGAGGAACCTCTGCAGTTCTAATTCAGCAA +
Preference number: 6 (lower is better)
Translates to: QLPLCDHIPQIP*CRGTSAVLIQQ
Trigger: TTGCTGAATTAGAACTGCAGAGGTTCCTCTACAGCAAGGTATCTGGGGTATATGGTCACACAAAGGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580395.1
CDS CCA 72 bp CACAGGTATCTGATGCTTCCACCTGAAGTCCTCGAATaGTACAATCAAGAAAAAGGGTATCTGACTGGGTGC +
Preference number: 6 (lower is better)
Translates to: HRYLMLPPEVLE*YNQEKGYLTGC
Trigger: GCACCCAGTCAGATACCCTTTTTCTTGATTGTACCATTCGAGGACTTCAGGTGGAAGCATCAGATACCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp GTTGTTGACAATGTCCAGGATCATGGCATACTGAGCTaGGTTGGTGGAAATTTCCAGCTCATGGTGGATAAG +
Preference number: 6 (lower is better)
Translates to: VVDNVQDHGILS*VGGNFQLMVDK
Trigger: CTTATCCACCATGAGCTGGAAATTTCCACCAACCCAGCTCAGTATGCCATGATCCTGGACATTGTCAACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp ACACTCACATCTTCTTGCTGCTTTCGCAGCTCCATCTaGTTAGCCCGCTGCAGTTGGAAATCCTTAAAACAC +
Preference number: 6 (lower is better)
Translates to: TLTSSCCFRSSI*LARCSWKSLKH
Trigger: GTGTTTTAAGGATTTCCAACTGCAGCGGGCTAACAAGATGGAGCTGCGAAAGCAGCAAGAAGATGTGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000579924.6
ENST00000580395.1
CDS CAA 72 bp CTCCCATCTTCTGTGTCAGGAGAGACCTCACCTCTTTaGACTATTCATGGACAATACCACGCTTGTGTTCTC +
Preference number: 6 (lower is better)
Translates to: LPSSVSGETSPL*TIHGQYHACVL
Trigger: GAGAACACAAGCGTGGTATTGTCCATGAATAGTCAAAAGAGGTGAGGTCTCTCCTGACACAGAAGATGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579253.1
CDS TCA 72 bp GACAGACATTGGGCACAGGTATCTGATGCTTCCACCTaGAGTCCTCGAATGGTACAATCAAGAAAAAGGGTA +
Preference number: 6 (lower is better)
Translates to: DRHWAQVSDAST*SPRMVQSRKRV
Trigger: TACCCTTTTTCTTGATTGTACCATTCGAGGACTTCAGGTGGAAGCATCAGATACCTGTGCCCAATGTCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 72 bp TGTCCTCCAGCTGACCACTCTTTAGAACTTTGCTGTTaGTCTTACATAAGCTCACCTCACAGATTAGCCTGG +
Preference number: 6 (lower is better)
Translates to: CPPADHSLELCC*SYISSPHRLAW
Trigger: CCAGGCTAATCTGTGAGGTGAGCTTATGTAAGATCAACAGCAAAGTTCTAAAGAGTGGTCAGCTGGAGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577580.1
CDS CCA 72 bp TTCTTCTCACTATGTTCCTTCCGCTTAGGTTCTACATaGAGCAGCAGGTTGTTGACAATGTCCAGGATCATG +
Preference number: 6 (lower is better)
Translates to: FFSLCSFRLGST*SSRLLTMSRIM
Trigger: CATGATCCTGGACATTGTCAACAACCTGCTGCTCCATGTAGAACCTAAGCGGAAGGAACATAGTGAGAAGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CCA 72 bp CTTCTCACCCTTGTAGCTGACACACAGTGGAACCTGTaGAATCTTTATGTAGATGAAGGAGTTGTTCATGGC +
Preference number: 6 (lower is better)
Translates to: LLTLVADTQWNL*NLYVDEGVVHG
Trigger: GCCATGAACAACTCCTTCATCTACATAAAGATTCCACAGGTTCCACTGTGTGTCAGCTACAAGGGTGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp CGAGGCTTCACCACTGGTATTCCAGTAGTCACCAGTTaGGACTTATCCTCTTCATCACCAACTTCATCATCT +
Preference number: 6 (lower is better)
Translates to: RGFTTGIPVVTS*DLSSSSPTSSS
Trigger: AGATGATGAAGTTGGTGATGAAGAGGATAAGTCCAAACTGGTGACTACTGGAATACCAGTGGTGAAGCCTCG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
ENST00000583860.1
CDS CAA 72 bp AAGCAGCAGTCGTCATACTTAGAGGCTGTTCTCACGTaGATATCCAAGTCACCCTTGAACACAAACTCAGTG +
Preference number: 6 (lower is better)
Translates to: KQQSSYLEAVLT*ISKSPLNTNSV
Trigger: CACTGAGTTTGTGTTCAAGGGTGACTTGGATATCAACGTGAGAACAGCCTCTAAGTATGACGACTGCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577261.1
CDS CAA 72 bp CCTAAGCTAGGTCAATGTCTCTCAATACAGCTGCCTTaGTGTGACCATATACCCCAGATACCTTGCTGTAGA +
Preference number: 6 (lower is better)
Translates to: PKLGQCLSIQLP*CDHIPQIPCCR
Trigger: TCTACAGCAAGGTATCTGGGGTATATGGTCACACAAAGGCAGCTGTATTGAGAGACATTGACCTAGCTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580395.1
CDS CAA 90 bp ACTATCACTCTCCCATCTTCTGTGTCAGGAGAGACCTCACCTCTTTaGACTATTCATGGACAATACCACGCTTGTGTTCTCCATCTTAAC +
Preference number: 6 (lower is better)
Translates to: TITLPSSVSGETSPL*TIHGQYHACVLHLN
Trigger: GTTAAGATGGAGAACACAAGCGTGGTATTGTCCATGAATAGTCAAAAGAGGTGAGGTCTCTCCTGACACAGAAGATGGGAGAGTGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579253.1
CDS CAA 72 bp TGGATTGCTAGAGATCTCAAGCTGGAACCTGACCCGTaGCTTCTTCTCACTATGTTCCTAAAGGAATGGAAA +
Preference number: 6 (lower is better)
Translates to: WIARDLKLEPDP*LLLTMFLKEWK
Trigger: TTTCCATTCCTTTAGGAACATAGTGAGAAGAAGCAACGGGTCAGGTTCCAGCTTGAGATCTCTAGCAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580395.1
CDS CAA 90 bp GGATCAATCTTTAACCCCTTCAGGGCCTCAGTAGAAAGATTACGTTaGAGTACAGCTGCCTTTTTGTACCCATCATATAACCCAAAGGCA +
Preference number: 6 (lower is better)
Translates to: GSIFNPFRASVERLR*STAAFLYPSYNPKA
Trigger: TGCCTTTGGGTTATATGATGGGTACAAAAAGGCAGCTGTACTCAAACGTAATCTTTCTACTGAGGCCCTGAAGGGGTTAAAGATTGATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 72 bp CACACAACTGGTCACTCATGCCTGATTCCTCTTCTGTaGACACTACAAACCTATCTGTCTCTTCAATTAGCT +
Preference number: 6 (lower is better)
Translates to: HTTGHSCLIPLL*TLQTYLSLQLA
Trigger: AGCTAATTGAAGAGACAGATAGGTTTGTAGTGTTCACAGAAGAGGAATCAGGCATGAGTGACCAGTTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 90 bp TTCAGGGCCTCAGTAGAAAGATTACGTTTGAGTACAGCTGCCTTTTaGTACCCATCATATAACCCAAAGGCAATGTCTCGATTGGTAGTT +
Preference number: 6 (lower is better)
Translates to: FRASVERLRLSTAAF*YPSYNPKAMSRLVV
Trigger: AACTACCAATCGAGACATTGCCTTTGGGTTATATGATGGGTACAAAAAGGCAGCTGTACTCAAACGTAATCTTTCTACTGAGGCCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS TCA 72 bp TACTTACCAGCTGACCACTCTTTAGAACTTTGCTGTTaGTCTTACATAAGCTCACCTCACAGATTAGCCTTT +
Preference number: 6 (lower is better)
Translates to: YLPADHSLELCC*SYISSPHRLAF
Trigger: AAAGGCTAATCTGTGAGGTGAGCTTATGTAAGATCAACAGCAAAGTTCTAAAGAGTGGTCAGCTGGTAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582901.1
CDS TCA 72 bp ATGAGGCATCTGAATGATCATGGCATACTTACCAGCTaGCCACTCTTTAGAACTTTGCTGTTGATCTTACAT +
Preference number: 6 (lower is better)
Translates to: MRHLNDHGILTS*PLFRTLLLILH
Trigger: ATGTAAGATCAACAGCAAAGTTCTAAAGAGTGGTCAGCTGGTAAGTATGCCATGATCATTCAGATGCCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582901.1
CDS CAA 72 bp TTGTACCCATCATATAACCCAAAGGCAATGTCTCGATaGGTAGTTGTCCAGGAAATCCGTAAATCTACTAAG +
Preference number: 6 (lower is better)
Translates to: LYPSYNPKAMSR*VVVQEIRKSTK
Trigger: CTTAGTAGATTTACGGATTTCCTGGACAACTACCAATCGAGACATTGCCTTTGGGTTATATGATGGGTACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 72 bp TCAGTAGAAAGATTACGTTTGAGTACAGCTGCCTTTTaGTACCCATCATATAACCCAAAGGCAATGTCTCGA +
Preference number: 6 (lower is better)
Translates to: SVERLRLSTAAF*YPSYNPKAMSR
Trigger: TCGAGACATTGCCTTTGGGTTATATGATGGGTACAAAAAGGCAGCTGTACTCAAACGTAATCTTTCTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389003.7
ENST00000528896.7
ENST00000544884.5
CDS CAA 90 bp AAGGAGTCTAGTCTAATGGGAAAGATATATAAAACAGGATTGCTGTaGAGACTCGGATTTGAGGAGGTCAAACAACCAAATACATATTTA +
Preference number: 6 (lower is better)
Translates to: KESSLMGKIYKTGLL*RLGFEEVKQPNTYL
Trigger: TAAATATGTATTTGGTTGTTTGACCTCCTCAAATCCGAGTCTCAACAGCAATCCTGTTTTATATATCTTTCCCATTAGACTAGACTCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580882.5