RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIAA0040 (Homo sapiens)

Ensembl gene IDs: ENSG00000235750

Ensembl transcript IDs: ENST00000423313.6, ENST00000444639.5, ENST00000545251.6, ENST00000563563.2, ENST00000567124.5, ENST00000619513.1

Found 843 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCGTGAACTTACCCTCCCCAGATGAGTCAAGCAGTCTCTGGTCCTaGGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGG +
Preference number: 1 (lower is better)
Translates to: PVNLPSPDESSSLWS*GPMGCQWQFRDRGW
Trigger: CCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGACCAGAGACTGCTTGACTCATCTGGGGAGGGTAAGTTCACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 90 bp AAAGGAGCAATGGGGAAAGGCCTCCTCTGGCTGCCGTCCGGAGCCTaGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTC +
Preference number: 1 (lower is better)
Translates to: KGAMGKGLLWLPSGA*LKLLRSPGLGDVFL
Trigger: GAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCTCCGGACGGCAGCCAGAGGAGGCCTTTCCCCATTGCTCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 90 bp TACCCTCCCCAGATGAGTCAAGCAGTCTCTGGTCCTGAGGTCCCATaGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGAGTGAA +
Preference number: 1 (lower is better)
Translates to: YPPQMSQAVSGPEVP*VASGSSGTEAGRSE
Trigger: TTCACTCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGACCAGAGACTGCTTGACTCATCTGGGGAGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR TCA 90 bp TTGCAAGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATaGCTCTACCATGGCGAAGGCGGTGACCAGGGAGGGCTGGGACAT +
Preference number: 1 (lower is better)
Translates to: LQARVRQPHSSSSDL*LYHGEGGDQGGLGH
Trigger: ATGTCCCAGCCCTCCCTGGTCACCGCCTTCGCCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCTTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 90 bp GTGCTTTGCATGTGGGGTATGCCAGAGACAGGTGGGAGGCATGCCTaGGTCTGCAGTAAGGAGCATTGCTATTGGACACATAGCTGCCAA +
Preference number: 1 (lower is better)
Translates to: VLCMWGMPETGGRHA*VCSKEHCYWTHSCQ
Trigger: TTGGCAGCTATGTGTCCAATAGCAATGCTCCTTACTGCAGACCCAGGCATGCCTCCCACCTGTCTCTGGCATACCCCACATGCAAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR CCA 90 bp TTGTGGGGAGATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATaGCAAGTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCAT +
Preference number: 1 (lower is better)
Translates to: LWGDVFHIPGFGAGR*QVILLCEGHSQRPH
Trigger: ATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATCTCCCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR TCA 90 bp GGGTTTGGCTCTTCTGAGTCATCGGCTGTGGAAGTGACTGAGAAGTaGGTTTCTGGGTGTTTCATCCCTGGGGTGAGAGCAAGTCCATTG +
Preference number: 1 (lower is better)
Translates to: GFGSSESSAVEVTEK*VSGCFIPGVRASPL
Trigger: CAATGGACTTGCTCTCACCCCAGGGATGAAACACCCAGAAACTCACTTCTCAGTCACTTCCACAGCCGATGACTCAGAAGAGCCAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR GCA 90 bp CATGCCTGGGTCTGCAGTAAGGAGCATTGCTATTGGACACATAGCTaGCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCTGGGACTG +
Preference number: 1 (lower is better)
Translates to: HAWVCSKEHCYWTHS*QDSIQELSTWSLGL
Trigger: CAGTCCCAGGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATAGCAATGCTCCTTACTGCAGACCCAGGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR CCA 90 bp CAGACCTATGACTCTACCATGGCGAAGGCGGTGACCAGGGAGGGCTaGGACATTTGTGTCACAGAAAGAGTCCCTGCATTGATCATTTCT +
Preference number: 1 (lower is better)
Translates to: QTYDSTMAKAVTREG*DICVTERVPALIIS
Trigger: AGAAATGATCAATGCAGGGACTCTTTCTGTGACACAAATGTCCCAGCCCTCCCTGGTCACCGCCTTCGCCATGGTAGAGTCATAGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR TCA 90 bp TTGAGGGAGTCTGGTCTCCAAGGCCATCTGTTTTGCAAGCAAGGGTaGGACAGCCACATTCCTCATCCTCAGACCTATGACTCTACCATG +
Preference number: 1 (lower is better)
Translates to: LRESGLQGHLFCKQG*DSHIPHPQTYDSTM
Trigger: CATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCTTGCAAAACAGATGGCCTTGGAGACCAGACTCCCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR GCA 90 bp TTGAGATGTATGGATAAATGTTCTTTGTGCTTTGCATGTGGGGTATaGCAGAGACAGGTGGGAGGCATGCCTGGGTCTGCAGTAAGGAGC +
Preference number: 1 (lower is better)
Translates to: LRCMDKCSLCFACGV*QRQVGGMPGSAVRS
Trigger: GCTCCTTACTGCAGACCCAGGCATGCCTCCCACCTGTCTCTGGCATACCCCACATGCAAAGCACAAAGAACATTTATCCATACATCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR TCA 90 bp CACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTaGGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCA +
Preference number: 1 (lower is better)
Translates to: HHQELFVLAWRKALC*VVCGGNVSQRGLGS
Trigger: TGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR TCA 90 bp TTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGTaGCAAGGGGATAGAGAACCAGAGTGCTTCTTTCTCTGGTCAAAG +
Preference number: 1 (lower is better)
Translates to: LCEGHSQRPHDKLSM*QGDREPECFFLWSK
Trigger: CTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATCCCCTTGTCACATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR TCA 90 bp ACAGCAGGGACATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATaGCAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCA +
Preference number: 1 (lower is better)
Translates to: TAGTLCLEIEALSWQ*QLTAVLIQRSKQLP
Trigger: TGGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAATGTCCCTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 90 bp AATTCAAAGGAGCAAGCAGTTGCCATGGAAACCATGTTACTTGTATaGTCCCGGATCCCGGTGATCCGCCCTCCTAGATCATATCTGACA +
Preference number: 1 (lower is better)
Translates to: NSKEQAVAMETMLLV*SRIPVIRPPRSYLT
Trigger: TGTCAGATATGATCTAGGAGGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACTGCTTGCTCCTTTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 90 bp CATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTaGGACTCCTCTAGTTACGCCAGGAAAGGTTGTCAGGGGAGTCTG +
Preference number: 1 (lower is better)
Translates to: HAPVYLTKRLGPILH*DSSSYARKGCQGSL
Trigger: CAGACTCCCCTGACAACCTTTCCTGGCGTAACTAGAGGAGTCCCAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 90 bp GAACATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTaGTCTCCAAGGCCATCTGTTTTGCAAGCAAGGGTGAGACAGCCA +
Preference number: 1 (lower is better)
Translates to: EHQYIFPVAGTFEGV*SPRPSVLQARVRQP
Trigger: TGGCTGTCTCACCCTTGCTTGCAAAACAGATGGCCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR TCA 90 bp AGTTACTCTGTGGACATGGACATAGTGCATTATTTCAGGGGTTCCTaGAATGTCTGTGTGTGGTCAGAAGGAGGCTTAGCCCCAGAAAGG +
Preference number: 1 (lower is better)
Translates to: SYSVDMDIVHYFRGS*NVCVWSEGGLAPER
Trigger: CCTTTCTGGGGCTAAGCCTCCTTCTGACCACACACAGACATTTCAGGAACCCCTGAAATAATGCACTATGTCCATGTCCACAGAGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR GCA 90 bp ACACACTTGGGAACCATATTGAGATGTATGGATAAATGTTCTTTGTaGTTTGCATGTGGGGTATGCCAGAGACAGGTGGGAGGCATGCCT +
Preference number: 1 (lower is better)
Translates to: THLGTILRCMDKCSL*FACGVCQRQVGGMP
Trigger: AGGCATGCCTCCCACCTGTCTCTGGCATACCCCACATGCAAAGCACAAAGAACATTTATCCATACATCTCAATATGGTTCCCAAGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR GCA 90 bp ATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTaGTGTCTTAATTCAAAGGAGCAAGCAGTTGCCATGGAAACCATG +
Preference number: 1 (lower is better)
Translates to: IVPGDRGLVMAMTTD*CLNSKEQAVAMETM
Trigger: CATGGTTTCCATGGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 90 bp ACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTaGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATT +
Preference number: 1 (lower is better)
Translates to: TKSSLFLLGERHFAE*FAGVMFHREVLDHI
Trigger: AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR GCA 90 bp TCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTaGCATACCGTGCACACATCACAACCTTATGACATCACTTCCAGT +
Preference number: 1 (lower is better)
Translates to: SSYFHLNSVTSASHL*HTVHTSQPYDITSS
Trigger: ACTGGAAGTGATGTCATAAGGTTGTGATGTGTGCACGGTATGGCACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR TCA 90 bp TGGTGTATGGGGGCCTTGCTGGTTAGGAAATTGTATATATGTGTCTaGATCTGGCAAGGCTTTCCCATGAGACATTTTTGTGACTGTAGA +
Preference number: 1 (lower is better)
Translates to: WCMGALLVRKLYICV*IWQGFPMRHFCDCR
Trigger: TCTACAGTCACAAAAATGTCTCATGGGAAAGCCTTGCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGGCCCCCATACACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR GCA 90 bp GGAAAGAAGAGAGTGGATATCAACAATGGCCTTAGGCTCCTTTCATaGACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTG +
Preference number: 1 (lower is better)
Translates to: GKKRVDINNGLRLLS*TCLFNKTFRAYPAL
Trigger: CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAGCCTAAGGCCATTGTTGATATCCACTCTCTTCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 90 bp TACAGTCACAATACAATAAAAATACCAAGCAGTTCATCCTATAAGTaGATTAACTCTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCT +
Preference number: 1 (lower is better)
Translates to: YSHNTIKIPSSSSYK*INSASQPHSGGESP
Trigger: AGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAGAGTTAATCCACTTATAGGATGAACTGCTTGGTATTTTTATTGTATTGTGACTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR TCA 90 bp ACACATACACACAGTTTTTGCCCTAGTGGCTACTATAGAGGTTTTTaGTCCCTCCTTTCCCAACAAACACTGGATTTAACTCAAAGGTCC +
Preference number: 1 (lower is better)
Translates to: THTHSFCPSGYYRGF*SLLSQQTLDLTQRS
Trigger: GGACCTTTGAGTTAAATCCAGTGTTTGTTGGGAAAGGAGGGATCAAAAACCTCTATAGTAGCCACTAGGGCAAAAACTGTGTGTATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR GCA 90 bp TTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATGTaGTCTCCAGCATTAAACACCCAATTTCATCCATTGCAGCAATTA +
Preference number: 1 (lower is better)
Translates to: FTCPHIPQGTCVTYM*SPALNTQFHPLQQL
Trigger: TAATTGCTGCAATGGATGAAATTGGGTGTTTAATGCTGGAGAGCACATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR CCA 90 bp AATAGGAAAGCATGCATCTGTAACCTGAGTGGTTTATGGAATAGATaGTGTATGGGGGCCTTGCTGGTTAGGAAATTGTATATATGTGTC +
Preference number: 1 (lower is better)
Translates to: NRKACICNLSGLWNR*CMGALLVRKLYICV
Trigger: GACACATATATACAATTTCCTAACCAGCAAGGCCCCCATACACCATCTATTCCATAAACCACTCAGGTTACAGATGCATGCTTTCCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR CCA 90 bp AGAGTTAGAAATAGGAAAGCATGCATCTGTAACCTGAGTGGTTTATaGAATAGATGGTGTATGGGGGCCTTGCTGGTTAGGAAATTGTAT +
Preference number: 1 (lower is better)
Translates to: RVRNRKACICNLSGL*NRWCMGALLVRKLY
Trigger: ATACAATTTCCTAACCAGCAAGGCCCCCATACACCATCTATTCCATAAACCACTCAGGTTACAGATGCATGCTTTCCTATTTCTAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR TCA 90 bp AATGAGGACGGACTTTGTCATGAGTTACAAGAAAAGAGCTTTCAATaGATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGG +
Preference number: 1 (lower is better)
Translates to: NEDGLCHELQEKSFQ*ILNHHTLNILAQVR
Trigger: CCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCCTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR TCA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCCTCGGGGAGAACTGGTaGGGTATTACAAGCTTACCC +
Preference number: 2 (lower is better)
Translates to: LLPNLTLAGKALLSSLWILGENW*GITSLP
Trigger: GGGTAAGCTTGTAATACCTCACCAGTTCTCCCCGAG...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR GCA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGAACAGCAGGGACATTGTaGCTGGAGATAGAGGCCTTG +
Preference number: 2 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGTAGTL*LEIEAL
Trigger: CAAGGCCTCTATCTCCAGGCACAATGTCCCTGCTGT...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CCA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCGGTCCTGAGGTCCCATaGGTTGCCAGTGGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRAGPEVP*VASGSS
Trigger: TGAACTGCCACTGGCAACCCATGGGACCTCAGGACC...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCAGAAAGGCACTTTGCTaGGTGGTTTGCGGGGGTAAT +
Preference number: 2 (lower is better)
Translates to: LLPNLTLAGKALLSSLWIRKALC*VVCGGN
Trigger: ATTACCCCCGCAAACCACTCAGCAAAGTGCCTTTCT...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR GCA 90 bp TTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCGTGGTCCCTGGGACTaGCCTCCACTGGGACACTTA +
Preference number: 2 (lower is better)
Translates to: LVQADGKSFCYVKGTARGRGPWD*PPLGHL
Trigger: TAAGTGTCCCAGTGGAGGGCAGTCCCAGGGACCACG...GCCTCTGGCTGTGCCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR TCA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCACATCTTGGCACAGGTaGGGGGTCAGAGGCACAGAA +
Preference number: 2 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPTSWHR*GVRGTE
Trigger: TTCTGTGCCTCTGACCCCTCACCTGTGCCAAGATGT...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCAGTCATTCTGTTATGTaGAGGGCACAGCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRASHSVM*RAQPEA
Trigger: GGCCTCTGGCTGTGCCCTTCACATAACAGAATGACT...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR GCA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCCATCCCTGGGTTTGGTaGAGGCAGATGGCAAGTCAT +
Preference number: 2 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRAHPWVW*RQMASH
Trigger: ATGACTTGCCATCTGCCTGCACCAAACCCAGGGATG...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR GCA 90 bp CCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGGTTTGCGGCGTGGTCCCTGGGACTaGCCTCCACTGGGACACTTA +
Preference number: 2 (lower is better)
Translates to: PRALCSCLEKGTLLSGLRRGPWD*PPLGHL
Trigger: TAAGTGTCCCAGTGGAGGGCAGTCCCAGGGACCACG...CCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTGTGTTACGTGCATGTaGACACACTTGGGAACCATA +
Preference number: 2 (lower is better)
Translates to: LLPNLTLAGKALLSSLWICVTCM*THLGTI
Trigger: TATGGTTCCCAAGTGTGTGCACATGCACGTAACACA...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CCA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCGAGCAGTGGCAGTTGTaGGGAGATGTCTTCCACATC +
Preference number: 2 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPEQWQL*GDVFHI
Trigger: GATGTGGAAGACATCTCCCCACAACTGCCACTGCTC...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CAA 90 bp GTGAGCAGTGGCAGTTGTGGGGAGATGTCTTCCACATCCCTGGGTTaGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGCACA +
Preference number: 2 (lower is better)
Translates to: VSSGSCGEMSSTSLG*VQADGKSFCYVKGT
Trigger: TGTGCCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATCTCCCCACAACTGCCACTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CAA 90 bp GTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGCCATCTGTTTaGCAAGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTA +
Preference number: 2 (lower is better)
Translates to: VAGTFEGVWSPRPSV*QARVRQPHSSSSDL
Trigger: TAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCTTGCAAAACAGATGGCCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTTGTATATATGTGTCTaGATCTGGCAAGGCTTTCCC +
Preference number: 2 (lower is better)
Translates to: LLPNLTLAGKALLSSLWILYICV*IWQGFP
Trigger: GGGAAAGCCTTGCCAGATTCAGACACATATATACAA...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR TCA 90 bp CACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGACATCTTGGCACAGGTaGGGGGTCAGAGGCACAGAA +
Preference number: 2 (lower is better)
Translates to: HIPGFGAGRWQVILLCEGTSWHR*GVRGTE
Trigger: TTCTGTGCCTCTGACCCCTCACCTGTGCCAAGATGT...CCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp CCAGAGTGCTTCTTTCTCTGGTCAAAGGGGTTGATGAGTGGGAGGCCTGAGTGCAGAAAGGCACTTTGCTaGGTGGTTTGCGGGGGTAAT +
Preference number: 2 (lower is better)
Translates to: PECFFLWSKGLMSGRPECRKALC*VVCGGN
Trigger: ATTACCCCCGCAAACCACTCAGCAAAGTGCCTTTCT...GCACTCAGGCCTCCCACTCATCAACCCCTTTGACCAGAGAAAGAAGCACTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp CCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGGTTTGCGGACATCTTGGCACAGGTaGGGGGTCAGAGGCACAGAA +
Preference number: 2 (lower is better)
Translates to: PRALCSCLEKGTLLSGLRTSWHR*GVRGTE
Trigger: TTCTGTGCCTCTGACCCCTCACCTGTGCCAAGATGT...CCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR TCA 90 bp AGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATGACTCTACCATGGTGGGTTTGGCTCTTCTaGGTCATCGGCTGTGGAAGT +
Preference number: 2 (lower is better)
Translates to: SKGETATFLILRPMTLPWWVWLF*VIGCGS
Trigger: ACTTCCACAGCCGATGACTCAGAAGAGCCAAACCCA...CCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR GCA 90 bp ATTCCTCATCCTCAGACCTATGACTCTACCATGGCGAAGGCGGTGACCAGGGAGACCTGTGCCATACCGTaGACACATCACAACCTTATG +
Preference number: 2 (lower is better)
Translates to: IPHPQTYDSTMAKAVTRETCAIP*THHNLM
Trigger: CATAAGGTTGTGATGTGTGCACGGTATGGCACAGGT...CTCCCTGGTCACCGCCTTCGCCATGGTAGAGTCATAGGTCTGAGGATGAGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR GCA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATCATCCCTGGGTTTGGTaGAGGCAGATGGCAAGTCAT +
Preference number: 2 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDHPWVW*RQMASH
Trigger: ATGACTTGCCATCTGCCTGCACCAAACCCAGGGATG...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CCA 90 bp ATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATCAAGAATTGTCCACGTaGTCCCTGGGACTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: MSSTSLGLVQADGKSFCYQELST*SLGLPS
Trigger: GGAGGGCAGTCCCAGGGACCACGTGGACAATTCTTG...ATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR CCA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCGGTGGGAGGCATGCCTaGGTCTGCAGTAAGGAGCAT +
Preference number: 2 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVGGRHA*VCSKEH
Trigger: ATGCTCCTTACTGCAGACCCAGGCATGCCTCCCACC...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CCA 90 bp AGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATGACTCTACCATGGGGCCTAAAGTACACCTaGAGGGCAGGTGAGTACCAA +
Preference number: 2 (lower is better)
Translates to: SKGETATFLILRPMTLPWGLKYT*RAGEYQ
Trigger: TTGGTACTCACCTGCCCTCCAGGTGTACTTTAGGCC...CCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CCA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGGGTCCTGAGGTCCCATaGGTTGCCAGTGGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRGPEVP*VASGSS
Trigger: TGAACTGCCACTGGCAACCCATGGGACCTCAGGACC...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGCTCGGGGAGAACTGGTaGGGTATTACAAGCTTACCC +
Preference number: 2 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMLGENW*GITSLP
Trigger: GGGTAAGCTTGTAATACCTCACCAGTTCTCCCCGAG...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp CTCCTTTCATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTGGGCAGCTTGTCCTGGTaGGCAGTGGCAGTTGTGGGG +
Preference number: 2 (lower is better)
Translates to: LLSCTCLFNKTFRAYPALGSLSW*AVAVVG
Trigger: CCCCACAACTGCCACTGCTCACCAGGACAAGCTGCC...CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp CTCCTTTCATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTGGGTCCCGGATCCCGGTaGTCCGCCCTCCTAGATCAT +
Preference number: 2 (lower is better)
Translates to: LLSCTCLFNKTFRAYPALGPGSR*SALLDH
Trigger: ATGATCTAGGAGGGCGGATCACCGGGATCCGGGACC...CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR GCA 90 bp TCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATAGAGGCCTTGTCAGGCATGCCTGGGTCTaGAGTAAGGAGCATTGCTAT +
Preference number: 2 (lower is better)
Translates to: SIGLGDSRDIVPGDRGLVRHAWV*SKEHCY
Trigger: ATAGCAATGCTCCTTACTGCAGACCCAGGCATGCCT...GACAAGGCCTCTATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR GCA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCATGTTCTTTGTGCTTTaGATGTGGGGTATGCCAGAG +
Preference number: 2 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPMFFVL*MWGMPE
Trigger: CTCTGGCATACCCCACATGCAAAGCACAAAGAACAT...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR GCA 90 bp CACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTAATTTACATGTCCACTTGCCCACGTACCTaGTACCTGAATTTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: HSGGESPPQLTVDLIYMSTCPRT*YLNLCV
Trigger: CACACACAAATTCAGGTAGCAGGTACGTGGGCAAGT...GGACATGTAAATTAGATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR CAA 90 bp CAAGGGGATAGAGAACCAGAGTGCTTCTTTCTCTGGTCAAAGGGGTaGATGAGTGGGAGGCCTGAGTGCTTAGGCAGTTTATGGCCATAT +
Preference number: 2 (lower is better)
Translates to: QGDREPECFFLWSKG*MSGRPECLGSLWPY
Trigger: ATATGGCCATAAACTGCCTAAGCACTCAGGCCTCCCACTCATCAACCCCTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATCCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATCAGTGTTGCCTTCTGTaGGACTGCACTGATGATTGT +
Preference number: 2 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDQCCLL*DCTDDC
Trigger: ACAATCATCAGTGCAGTCTCACAGAAGGCAACACTG...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGAGTCATTCTGTTATGTaGAGGGCACAGCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRSHSVM*RAQPEA
Trigger: GGCCTCTGGCTGTGCCCTTCACATAACAGAATGACT...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTCCATGGCGAAGGCGGTaGCCAGGGAGGGCTGGGACA +
Preference number: 2 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCPWRRR*PGRAGT
Trigger: TGTCCCAGCCCTCCCTGGTCACCGCCTTCGCCATGG...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR GCA 90 bp CTGTTAGAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCTCCATCTGTAAACATTaGACAGGTACACAGTTGCAG +
Preference number: 2 (lower is better)
Translates to: LLENPGARVTTKCPPSTGSICKH*TGTQLQ
Trigger: CTGCAACTGTGTACCTGTGCAATGTTTACAGATGGA...GCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTCTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR GCA 90 bp ATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATAGTGGGAGGCCTGAGTaGTTAGGCAGTTTATGGCCA +
Preference number: 2 (lower is better)
Translates to: MSSTSLGLVQADGKSFCYSGRPE*LGSLWP
Trigger: TGGCCATAAACTGCCTAAGCACTCAGGCCTCCCACT...ATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR GCA 90 bp ATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTGCTGTCTTCATCCCTGGGTTTGGTaGAGGCAGATGGCAAGTCAT +
Preference number: 2 (lower is better)
Translates to: IVPGDRGLVMAMTTDCCLHPWVW*RQMASH
Trigger: ATGACTTGCCATCTGCCTGCACCAAACCCAGGGATG...AAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CCA 90 bp ATTCCTCATCCTCAGACCTATGACTCTACCATGGCGAAGGCGGTGACCAGGGAGAGAGGCACAGAAACTTaGTGTGTCTGTATCAAGACA +
Preference number: 2 (lower is better)
Translates to: IPHPQTYDSTMAKAVTRERGTET*CVCIKT
Trigger: TGTCTTGATACAGACACACCAAGTTTCTGTGCCTCT...CTCCCTGGTCACCGCCTTCGCCATGGTAGAGTCATAGGTCTGAGGATGAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CCA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGTGTCTTCCACATCCCTaGGTTTGGTGCAGGCAGATG +
Preference number: 2 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRCLPHP*VWCRQM
Trigger: CATCTGCCTGCACCAAACCCAGGGATGTGGAAGACA...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CCA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTGGGAAAGGCCTCCTCTaGCTGCCGTCCGGAGCCTGG +
Preference number: 2 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCGKGLL*LPSGAW
Trigger: CCAGGCTCCGGACGGCAGCCAGAGGAGGCCTTTCCC...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp CACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTAATTTACATGTCCGGACGGACTTTGTCATaGGTTACAAGAAAAGAGCTT +
Preference number: 2 (lower is better)
Translates to: HSGGESPPQLTVDLIYMSGRTLS*VTRKEL
Trigger: AAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCC...GGACATGTAAATTAGATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR TCA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGCATCGGCTGTGGAAGTaGCTGAGAAGTGAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRHRLWK*LRSEFL
Trigger: CAGAAACTCACTTCTCAGTCACTTCCACAGCCGATG...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR GCA 90 bp ATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTGCTGTCTTAGGCATGCCTGGGTCTaGAGTAAGGAGCATTGCTAT +
Preference number: 2 (lower is better)
Translates to: IVPGDRGLVMAMTTDCCLRHAWV*SKEHCY
Trigger: ATAGCAATGCTCCTTACTGCAGACCCAGGCATGCCT...AAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR GCA 90 bp CCAGAGTGCTTCTTTCTCTGGTCAAAGGGGTTGATGAGTGGGAGGCCTGAGTGCGATAAATGTTCTTTGTaGTTTGCATGTGGGGTATGC +
Preference number: 2 (lower is better)
Translates to: PECFFLWSKGLMSGRPECDKCSL*FACGVC
Trigger: GCATACCCCACATGCAAAGCACAAAGAACATTTATC...GCACTCAGGCCTCCCACTCATCAACCCCTTTGACCAGAGAAAGAAGCACTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR GCA 90 bp CACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGTGTGTTACGTGCATGTaGACACACTTGGGAACCATA +
Preference number: 2 (lower is better)
Translates to: HIPGFGAGRWQVILLCEGCVTCM*THLGTI
Trigger: TATGGTTCCCAAGTGTGTGCACATGCACGTAACACA...CCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR GCA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATGGTGTATGGGGGCCTTaGTGGTTAGGAAATTGTATA +
Preference number: 2 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDGVWGP*WLGNCI
Trigger: TATACAATTTCCTAACCAGCAAGGCCCCCATACACC...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR GCA 90 bp AGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATGACTCTACCATGGTGTGTCACCTACATGTaGTCTCCAGCATTAAACACC +
Preference number: 2 (lower is better)
Translates to: SKGETATFLILRPMTLPWCVTYM*SPALNT
Trigger: GGTGTTTAATGCTGGAGAGCACATGTAGGTGACACA...CCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CCA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGGTGGGAGGCATGCCTaGGTCTGCAGTAAGGAGCAT +
Preference number: 2 (lower is better)
Translates to: AGLNYDSQGHLLENPGARGGRHA*VCSKEH
Trigger: ATGCTCCTTACTGCAGACCCAGGCATGCCTCCCACC...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR CCA 90 bp GAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCCTAAAGTTCACAGAGAGGTCTTaGATCACATTAAACACCTCT +
Preference number: 2 (lower is better)
Translates to: ENPGARVTTKCPPSTGLKFTERS*ITLNTS
Trigger: AGAGGTGTTTAATGTGATCCAAGACCTCTCTGTGAA...CTTTAGGCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CCA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGAGGCACTTTGCTGAGTaGTTTGCGGGGGTAATGTTT +
Preference number: 2 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMRHFAE*FAGVMF
Trigger: AAACATTACCCCCGCAAACCACTCAGCAAAGTGCCT...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCGGCCTAAAGTACACCTaGAGGGCAGGTGAGTACCAA +
Preference number: 2 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVAGLKYT*RAGEYQ
Trigger: TTGGTACTCACCTGCCCTCCAGGTGTACTTTAGGCC...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CAA 90 bp GGACTGCCCTCCACTGGGACACTTAGTCTGAGGTTTGTTCCTTGGTaGAGTAGTTACTCTGTGGACATGGACATAGTGCATTATTTCAGG +
Preference number: 2 (lower is better)
Translates to: GLPSTGTLSLRFVPW*SSYSVDMDIVHYFR
Trigger: CCTGAAATAATGCACTATGTCCATGTCCACAGAGTAACTACTCAACCAAGGAACAAACCTCAGACTAAGTGTCCCAGTGGAGGGCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR CAA 90 bp CACTTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTaGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTT +
Preference number: 2 (lower is better)
Translates to: HFAEWFAGVMFHREV*DHIKHLSVAMRTDF
Trigger: AAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR TCA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCCACGTACCTGCTACCTaGATTTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVHVPAT*ICVCVC
Trigger: ACACACACACACACAAATTCAGGTAGCAGGTACGTG...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTGTGTTACGTGCATGTaGACACACTTGGGAACCATA +
Preference number: 2 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDCVTCM*THLGTI
Trigger: TATGGTTCCCAAGTGTGTGCACATGCACGTAACACA...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp CATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGGGAGAACTTGCCCACGTACCTaGTACCTGAATTTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: HPLQQLVGSLRREDHSGRTCPRT*YLNLCV
Trigger: CACACACAAATTCAGGTAGCAGGTACGTGGGCAAGT...TCTCCCCGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp CCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGGTTTGCGGGGTGTATGGGGGCCTTaGTGGTTAGGAAATTGTATA +
Preference number: 2 (lower is better)
Translates to: PRALCSCLEKGTLLSGLRGVWGP*WLGNCI
Trigger: TATACAATTTCCTAACCAGCAAGGCCCCCATACACC...CCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CCA 90 bp AACACCCAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCAAGAATTGTCCACGTaGTCCCTGGGACTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: NTQFHPLQQLVGSLRREDQELST*SLGLPS
Trigger: GGAGGGCAGTCCCAGGGACCACGTGGACAATTCTTG...ATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CCA 90 bp CACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTAATTTACATGTCCTTCACAGAGAGGTCTTaGATCACATTAAACACCTCT +
Preference number: 2 (lower is better)
Translates to: HSGGESPPQLTVDLIYMSFTERS*ITLNTS
Trigger: AGAGGTGTTTAATGTGATCCAAGACCTCTCTGTGAA...GGACATGTAAATTAGATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR CAA 90 bp TGCACACACTTGGGAACCATATTGAGATGTATGGATAAATGTTCTTaGTGCTTTGCATGTGGGGTATGCCAGAGACAGGTGGGAGGCATG +
Preference number: 2 (lower is better)
Translates to: CTHLGTILRCMDKCS*CFACGVCQRQVGGM
Trigger: CATGCCTCCCACCTGTCTCTGGCATACCCCACATGCAAAGCACAAAGAACATTTATCCATACATCTCAATATGGTTCCCAAGTGTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR CAA 90 bp GTCACCTACATGTGCTCTCCAGCATTAAACACCCAATTTCATCCATaGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGGG +
Preference number: 2 (lower is better)
Translates to: VTYMCSPALNTQFHP*QQLVGSLRREDHSG
Trigger: CCCCGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTTTAATGCTGGAGAGCACATGTAGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR TCA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTAGCAGTCTCTGGTCCTaGGGTCCCATGGGTTGCCAG +
Preference number: 2 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCSSLWS*GPMGCQ
Trigger: CTGGCAACCCATGGGACCTCAGGACCAGAGACTGCT...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR GCA 90 bp AGGTATTACAAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTCGTGGTCCCTGGGACTaGCCTCCACTGGGACACTTA +
Preference number: 2 (lower is better)
Translates to: RYYKLTLNNITYPTVTTVRGPWD*PPLGHL
Trigger: TAAGTGTCCCAGTGGAGGGCAGTCCCAGGGACCACG...AACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTTGTAATACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp GGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGTCTCTGCATCCCACCTGTaGCATACCGTGCACACATCA +
Preference number: 2 (lower is better)
Translates to: GLNYDSQGHLLENPGARVSASHL*HTVHTS
Trigger: TGATGTGTGCACGGTATGGCACAGGTGGGATGCAGA...GACCCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR GCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATTCTGCATCCCACCTGTaGCATACCGTGCACACATCA +
Preference number: 2 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHSASHL*HTVHTS
Trigger: TGATGTGTGCACGGTATGGCACAGGTGGGATGCAGA...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR CCA 90 bp CACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGGTATGGGGGCCTTGCTaGTTAGGAAATTGTATATAT +
Preference number: 2 (lower is better)
Translates to: HIPGFGAGRWQVILLCEGVWGPC*LGNCIY
Trigger: ATATATACAATTTCCTAACCAGCAAGGCCCCCATAC...CCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR CCA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTGGTTTATGGAATAGATaGTGTATGGGGGCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: FAEWFAGVMFHREVLDHIGLWNR*CMGALL
Trigger: CAGCAAGGCCCCCATACACCATCTATTCCATAAACC...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CCA 90 bp CCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGGTTTGCGGAGAGGCACAGAAACTTaGTGTGTCTGTATCAAGACA +
Preference number: 2 (lower is better)
Translates to: PRALCSCLEKGTLLSGLRRGTET*CVCIKT
Trigger: TGTCTTGATACAGACACACCAAGTTTCTGTGCCTCT...CCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR CCA 90 bp TTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCAGTTCATCCTATAAGTaGATTAACTCTGCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: LVQADGKSFCYVKGTARGSSSYK*INSASQ
Trigger: TTGGGAAGCAGAGTTAATCCACTTATAGGATGAACT...GCCTCTGGCTGTGCCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp CTCCTTTCATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTGAGAAAGGCACTTTGCTaGGTGGTTTGCGGGGGTAAT +
Preference number: 2 (lower is better)
Translates to: LLSCTCLFNKTFRAYPALRKALC*VVCGGN
Trigger: ATTACCCCCGCAAACCACTCAGCAAAGTGCCTTTCT...CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR GCA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTATTGGACACATAGCTaGCAAGACAGTATCCAAGAA +
Preference number: 2 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDYWTHS*QDSIQE
Trigger: TTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATA...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp GTATGGATAAATGTTCTTTGTGCTTTGCATGTGGGGTATGCCAGAGACAGGTGGTGCAGTAAGGAGCATTaGTATTGGACACATAGCTGC +
Preference number: 2 (lower is better)
Translates to: VWINVLCALHVGYARDRWCSKEH*YWTHSC
Trigger: GCAGCTATGTGTCCAATAGCAATGCTCCTTACTGCA...CCACCTGTCTCTGGCATACCCCACATGCAAAGCACAAAGAACATTTATCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACTGCAGTAAGGAGCATTaGTATTGGACACATAGCTGC +
Preference number: 2 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHCSKEH*YWTHSC
Trigger: GCAGCTATGTGTCCAATAGCAATGCTCCTTACTGCA...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGAGAAATAGGAAAGCATaGATCTGTAACCTGAGTGGT +
Preference number: 2 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMRNRKA*ICNLSG
Trigger: ACCACTCAGGTTACAGATGCATGCTTTCCTATTTCT...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR GCA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGAAAGGAGCAAGCAGTTaGCATGGAAACCATGTTACT +
Preference number: 2 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRKGASS*HGNHVT
Trigger: AGTAACATGGTTTCCATGGCAACTGCTTGCTCCTTT...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR GCA 90 bp ATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTGCTGTCTTAAAGGAGCAAGCAGTTaGCATGGAAACCATGTTACT +
Preference number: 2 (lower is better)
Translates to: IVPGDRGLVMAMTTDCCLKGASS*HGNHVT
Trigger: AGTAACATGGTTTCCATGGCAACTGCTTGCTCCTTT...AAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CCA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGGTATGGGGGCCTTGCTaGTTAGGAAATTGTATATAT +
Preference number: 2 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMVWGPC*LGNCIY
Trigger: ATATATACAATTTCCTAACCAGCAAGGCCCCCATAC...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR CCA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCAACCTGAGTGGTTTATaGAATAGATGGTGTATGGGG +
Preference number: 2 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVNLSGL*NRWCMG
Trigger: CCCCATACACCATCTATTCCATAAACCACTCAGGTT...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CCA 90 bp GTGGGCTTCCATAATTTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTAGGCACTTTGCTGAGTaGTTTGCGGGGGTAATGTTT +
Preference number: 2 (lower is better)
Translates to: VGFHNFLAVTTKSSLFLLRHFAE*FAGVMF
Trigger: AAACATTACCCCCGCAAACCACTCAGCAAAGTGCCT...AAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAAATTATGGAAGCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR CCA 90 bp TCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATAGAGGCCTTGTCAGTTCATCCTATAAGTaGATTAACTCTGCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: SIGLGDSRDIVPGDRGLVSSSYK*INSASQ
Trigger: TTGGGAAGCAGAGTTAATCCACTTATAGGATGAACT...GACAAGGCCTCTATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CCA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTGGGCCTATCCTGCACTaGGACTCCTCTAGTTACGCC +
Preference number: 2 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCGPILH*DSSSYA
Trigger: GGCGTAACTAGAGGAGTCCCAGTGCAGGATAGGCCC...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp CTCCTTTCATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTGCACGTACCTGCTACCTaGATTTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: LLSCTCLFNKTFRAYPALHVPAT*ICVCVC
Trigger: ACACACACACACACAAATTCAGGTAGCAGGTACGTG...CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR TCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATCACGTACCTGCTACCTaGATTTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHHVPAT*ICVCVC
Trigger: ACACACACACACACAAATTCAGGTAGCAGGTACGTG...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR TCA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTGGACGGACTTTGTCATaGGTTACAAGAAAAGAGCTT +
Preference number: 2 (lower is better)
Translates to: FAEWFAGVMFHREVLDHIGRTLS*VTRKEL
Trigger: AAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCC...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR TCA 90 bp ATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATACCAAGCAGCCCAAGTaGGCAAATAGAATATATCTT +
Preference number: 2 (lower is better)
Translates to: MSSTSLGLVQADGKSFCYTKQPK*ANRIYL
Trigger: AAGATATATTCTATTTGCTCACTTGGGCTGCTTGGT...ATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR GCA 90 bp CTCCTTTCATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTGACTTGCCCACGTACCTaGTACCTGAATTTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: LLSCTCLFNKTFRAYPALTCPRT*YLNLCV
Trigger: CACACACAAATTCAGGTAGCAGGTACGTGGGCAAGT...CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR GCA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGACCTGTGCCATACCGTaGACACATCACAACCTTATG +
Preference number: 2 (lower is better)
Translates to: AGLNYDSQGHLLENPGARTCAIP*THHNLM
Trigger: CATAAGGTTGTGATGTGTGCACGGTATGGCACAGGT...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CCA 90 bp ATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATTTCACAGAGAGGTCTTaGATCACATTAAACACCTCT +
Preference number: 2 (lower is better)
Translates to: MSSTSLGLVQADGKSFCYFTERS*ITLNTS
Trigger: AGAGGTGTTTAATGTGATCCAAGACCTCTCTGTGAA...ATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CAA 90 bp TGCACAAAGTACATAGCCAATGACCATTTGATGAGCAGAATATACTaGCCCACGTACCTGCTACCTGAATTTGTGTGTGTGTGTGTTACG +
Preference number: 2 (lower is better)
Translates to: CTKYIANDHLMSRIY*PTYLLPEFVCVCVT
Trigger: CGTAACACACACACACACAAATTCAGGTAGCAGGTACGTGGGCAAGTATATTCTGCTCATCAAATGGTCATTGGCTATGTACTTTGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR CAA 90 bp TGGTGTGTCTGTATCAAGACACACAAGGGTGGGGACTGTAGCAGGTaGCTGGAATGTCCAATTATGAGTACTTCCAGTAAAAGTTTATGT +
Preference number: 2 (lower is better)
Translates to: WCVCIKTHKGGDCSR*LECPIMSTSSKSLC
Trigger: ACATAAACTTTTACTGGAAGTACTCATAATTGGACATTCCAGCAACCTGCTACAGTCCCCACCCTTGTGTGTCTTGATACAGACACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR TCA 90 bp CATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGGGAGAAAAGTACATAGCCAATaGCCATTTGATGAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: HPLQQLVGSLRREDHSGRKVHSQ*PFDEQN
Trigger: ATTCTGCTCATCAAATGGTCATTGGCTATGTACTTT...TCTCCCCGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR TCA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGCACATCACAACCTTATaGCATCACTTCCAGTGTTGC +
Preference number: 2 (lower is better)
Translates to: AGLNYDSQGHLLENPGARHITTL*HHFQCC
Trigger: GCAACACTGGAAGTGATGTCATAAGGTTGTGATGTG...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATCACATCACAACCTTATaGCATCACTTCCAGTGTTGC +
Preference number: 2 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHHITTL*HHFQCC
Trigger: GCAACACTGGAAGTGATGTCATAAGGTTGTGATGTG...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR GCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATTGCAGTAAGGAGCATTaGTATTGGACACATAGCTGC +
Preference number: 2 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHCSKEH*YWTHSC
Trigger: GCAGCTATGTGTCCAATAGCAATGCTCCTTACTGCA...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTGATAAATGTTCTTTGTaGTTTGCATGTGGGGTATGC +
Preference number: 2 (lower is better)
Translates to: FAEWFAGVMFHREVLDHIDKCSL*FACGVC
Trigger: GCATACCCCACATGCAAAGCACAAAGAACATTTATC...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CCA 90 bp TCTCTATGTGACAAGGGGATAGAGAACCAGAGTGCTTCTTTCTCTGGTCAAAGGCCCTGCTGGAAACTTTaGTTATATAGGAGATACCTA +
Preference number: 2 (lower is better)
Translates to: SLCDKGIENQSASFSGQRPCWKL*LYRRYL
Trigger: TAGGTATCTCCTATATAACCAAAGTTTCCAGCAGGG...CCTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATCCCCTTGTCACATAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp TTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTCATGCATCTGTAACCTaGGTGGTTTATGGAATAGAT +
Preference number: 2 (lower is better)
Translates to: FLAVTTKSSLFLLGERHFHASVT*VVYGID
Trigger: ATCTATTCCATAAACCACTCAGGTTACAGATGCATG...AAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR TCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATGGACGGACTTTGTCATaGGTTACAAGAAAAGAGCTT +
Preference number: 2 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHGRTLS*VTRKEL
Trigger: AAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCC...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR GCA 90 bp TCTCTATGTGACAAGGGGATAGAGAACCAGAGTGCTTCTTTCTCTGGTCAAAGGGATAATGTACTTCCCTaGACAAAGTACATAGCCAAT +
Preference number: 2 (lower is better)
Translates to: SLCDKGIENQSASFSGQRDNVLP*TKYIAN
Trigger: ATTGGCTATGTACTTTGTGCAGGGAAGTACATTATC...CCTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATCCCCTTGTCACATAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR CCA 90 bp GGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGTCCTGAGGTTTGTTCCTTaGTTGAGTAGTTACTCTGTG +
Preference number: 2 (lower is better)
Translates to: GLNYDSQGHLLENPGARVLRFVP*LSSYSV
Trigger: CACAGAGTAACTACTCAACCAAGGAACAAACCTCAG...GACCCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR CCA 90 bp GGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGTCAACCTGAGTGGTTTATaGAATAGATGGTGTATGGGG +
Preference number: 2 (lower is better)
Translates to: GLNYDSQGHLLENPGARVNLSGL*NRWCMG
Trigger: CCCCATACACCATCTATTCCATAAACCACTCAGGTT...GACCCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR CCA 90 bp CTCCTTTCATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTGTTTGGTGCAGGCAGATaGCAAGTCATTCTGTTATGT +
Preference number: 2 (lower is better)
Translates to: LLSCTCLFNKTFRAYPALFGAGR*QVILLC
Trigger: ACATAACAGAATGACTTGCCATCTGCCTGCACCAAA...CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CAA 90 bp GTAGATAATGTACTTCCCTGCACAAAGTACATAGCCAATGACCATTaGATGAGCAGAATATACTTGCCCACGTACCTGCTACCTGAATTT +
Preference number: 2 (lower is better)
Translates to: VDNVLPCTKYIANDH*MSRIYLPTYLLPEF
Trigger: AAATTCAGGTAGCAGGTACGTGGGCAAGTATATTCTGCTCATCAAATGGTCATTGGCTATGTACTTTGTGCAGGGAAGTACATTATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR TCA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGGGACGGACTTTGTCATaGGTTACAAGAAAAGAGCTT +
Preference number: 2 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVGRTLS*VTRKEL
Trigger: AAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCC...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR GCA 90 bp GAGCTTTCAATGAATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGATGTTCTTTGTGCTTTaGATGTGGGGTATGCCAGAG +
Preference number: 2 (lower is better)
Translates to: ELSMNFEPSHFKHLGTGEMFFVL*MWGMPE
Trigger: CTCTGGCATACCCCACATGCAAAGCACAAAGAACAT...CTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTATGTTCTTTGTGCTTTaGATGTGGGGTATGCCAGAG +
Preference number: 2 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPMFFVL*MWGMPE
Trigger: CTCTGGCATACCCCACATGCAAAGCACAAAGAACAT...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp CCTTGCTGGTTAGGAAATTGTATATATGTGTCTGAATCTGGCAAGGCTTTCCCAGATAAATGTTCTTTGTaGTTTGCATGTGGGGTATGC +
Preference number: 2 (lower is better)
Translates to: PCWLGNCIYVSESGKAFPDKCSL*FACGVC
Trigger: GCATACCCCACATGCAAAGCACAAAGAACATTTATC...TGGGAAAGCCTTGCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGGTGTATGGGGGCCTTaGTGGTTAGGAAATTGTATA +
Preference number: 2 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPGVWGP*WLGNCI
Trigger: TATACAATTTCCTAACCAGCAAGGCCCCCATACACC...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGAGAAATAGGAAAGCATaGATCTGTAACCTGAGTGGT +
Preference number: 2 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSRNRKA*ICNLSG
Trigger: ACCACTCAGGTTACAGATGCATGCTTTCCTATTTCT...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR GCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATAGAAATAGGAAAGCATaGATCTGTAACCTGAGTGGT +
Preference number: 2 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHRNRKA*ICNLSG
Trigger: ACCACTCAGGTTACAGATGCATGCTTTCCTATTTCT...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR CCA 90 bp AGGTATTACAAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTGGTTTATGGAATAGATaGTGTATGGGGGCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: RYYKLTLNNITYPTVTTVGLWNR*CMGALL
Trigger: CAGCAAGGCCCCCATACACCATCTATTCCATAAACC...AACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTTGTAATACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CCA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGAGAGGCACAGAAACTTaGTGTGTCTGTATCAAGACA +
Preference number: 2 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVRGTET*CVCIKT
Trigger: TGTCTTGATACAGACACACCAAGTTTCTGTGCCTCT...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR CCA 90 bp GGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGTCCCCTGCTGGAAACTTTaGTTATATAGGAGATACCTA +
Preference number: 2 (lower is better)
Translates to: GLNYDSQGHLLENPGARVPCWKL*LYRRYL
Trigger: TAGGTATCTCCTATATAACCAAAGTTTCCAGCAGGG...GACCCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp GAGCTTTCAATGAATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGTTGTATATATGTGTCTaGATCTGGCAAGGCTTTCCC +
Preference number: 2 (lower is better)
Translates to: ELSMNFEPSHFKHLGTGELYICV*IWQGFP
Trigger: GGGAAAGCCTTGCCAGATTCAGACACATATATACAA...CTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR TCA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTTTGTATATATGTGTCTaGATCTGGCAAGGCTTTCCC +
Preference number: 2 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPLYICV*IWQGFP
Trigger: GGGAAAGCCTTGCCAGATTCAGACACATATATACAA...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp GTACTTCCCTGCACAAAGTACATAGCCAATGACCATTTGATGAGCAGAATATACTATTGGACACATAGCTaGCAAGACAGTATCCAAGAA +
Preference number: 2 (lower is better)
Translates to: VLPCTKYIANDHLMSRIYYWTHS*QDSIQE
Trigger: TTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATA...GTATATTCTGCTCATCAAATGGTCATTGGCTATGTACTTTGTGCAGGGAAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGATAATGTACTTCCCTaGACAAAGTACATAGCCAAT +
Preference number: 2 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSDNVLP*TKYIAN
Trigger: ATTGGCTATGTACTTTGTGCAGGGAAGTACATTATC...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp AACACCCAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATAGAAATAGGAAAGCATaGATCTGTAACCTGAGTGGT +
Preference number: 2 (lower is better)
Translates to: NTQFHPLQQLVGSLRREDRNRKA*ICNLSG
Trigger: ACCACTCAGGTTACAGATGCATGCTTTCCTATTTCT...ATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR CCA 90 bp GAGCTTTCAATGAATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGCTGAGGTTTGTTCCTTaGTTGAGTAGTTACTCTGTG +
Preference number: 2 (lower is better)
Translates to: ELSMNFEPSHFKHLGTGELRFVP*LSSYSV
Trigger: CACAGAGTAACTACTCAACCAAGGAACAAACCTCAG...CTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CCA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTAACCTGAGTGGTTTATaGAATAGATGGTGTATGGGG +
Preference number: 2 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPNLSGL*NRWCMG
Trigger: CCCCATACACCATCTATTCCATAAACCACTCAGGTT...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTTCCATCTGTAAACATTaGACAGGTACACAGTTGCAG +
Preference number: 2 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCSICKH*TGTQLQ
Trigger: CTGCAACTGTGTACCTGTGCAATGTTTACAGATGGA...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CCA 90 bp AGGTATTACAAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTCTGAGGTTTGTTCCTTaGTTGAGTAGTTACTCTGTG +
Preference number: 2 (lower is better)
Translates to: RYYKLTLNNITYPTVTTVLRFVP*LSSYSV
Trigger: CACAGAGTAACTACTCAACCAAGGAACAAACCTCAG...AACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTTGTAATACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CCA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTTTTGGTGCAGGCAGATaGCAAGTCATTCTGTTATGT +
Preference number: 2 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCFGAGR*QVILLC
Trigger: ACATAACAGAATGACTTGCCATCTGCCTGCACCAAA...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR TCA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTAAAGTACATAGCCAATaGCCATTTGATGAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPKVHSQ*PFDEQN
Trigger: ATTCTGCTCATCAAATGGTCATTGGCTATGTACTTT...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGAGAGGCACAGAAACTTaGTGTGTCTGTATCAAGACA +
Preference number: 2 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKRGTET*CVCIKT
Trigger: TGTCTTGATACAGACACACCAAGTTTCTGTGCCTCT...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR TCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGCATGCATCTGTAACCTaGGTGGTTTATGGAATAGAT +
Preference number: 2 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKHASVT*VVYGID
Trigger: ATCTATTCCATAAACCACTCAGGTTACAGATGCATG...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR GCA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTGATAATGTACTTCCCTaGACAAAGTACATAGCCAAT +
Preference number: 2 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCDNVLP*TKYIAN
Trigger: ATTGGCTATGTACTTTGTGCAGGGAAGTACATTATC...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR CCA 72 bp ATGGGGAAAGGCCTCCTCTGGCTGCCGTCCGGAGCCTaGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGAT +
Preference number: 3 (lower is better)
Translates to: MGKGLLWLPSGA*LKLLRSPGLGD
Trigger: ATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCTCCGGACGGCAGCCAGAGGAGGCCTTTCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGATCCACATCCCTGGGTTaGGTGCAGGCAGATGGCAAG +
Preference number: 3 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGSTSLG*VQADGK
Trigger: CTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGA...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGAGAGACAGCAGGGACATaGTGCCTGGAGATAGAGGCC +
Preference number: 3 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGETAGT*CLEIEA
Trigger: GGCCTCTATCTCCAGGCACAATGTCCCTGCTGTCTC...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCCTGAGGTCCCATGGGTaGCCAGTGGCAGTTCAGGGA +
Preference number: 3 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRALRSHG*PVAVQG
Trigger: TCCCTGAACTGCCACTGGCAACCCATGGGACCTCAG...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR TCA 72 bp AGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATaGCTCTACCATGGCGAAGGCGGTGACCAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: RVRQPHSSSSDL*LYHGEGGDQGG
Trigger: CCCTCCCTGGTCACCGCCTTCGCCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 72 bp CAGATGAGTCAAGCAGTCTCTGGTCCTGAGGTCCCATaGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGA +
Preference number: 3 (lower is better)
Translates to: QMSQAVSGPEVP*VASGSSGTEAG
Trigger: TCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGACCAGAGACTGCTTGACTCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 72 bp ACTAAATGCCCACCCTCCACAGGCCTAAAGTACACCTaGAGGGCAGGTGAGTACCAAGCAGCCCAAGTGAGC +
Preference number: 3 (lower is better)
Translates to: TKCPPSTGLKYT*RAGEYQAAQVS
Trigger: GCTCACTTGGGCTGCTTGGTACTCACCTGCCCTCCAGGTGTACTTTAGGCCTGTGGAGGGTGGGCATTTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 72 bp GACTCTACCATGGCGAAGGCGGTGACCAGGGAGGGCTaGGACATTTGTGTCACAGAAAGAGTCCCTGCATTG +
Preference number: 3 (lower is better)
Translates to: DSTMAKAVTREG*DICVTERVPAL
Trigger: CAATGCAGGGACTCTTTCTGTGACACAAATGTCCCAGCCCTCCCTGGTCACCGCCTTCGCCATGGTAGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp ATTCCTCATCCTCAGACCTATGACTCTACCATGGCGAAGGCGGTGACCAGGGAGTTGGAGAAAGGCACTTaGCTGAGTGGTTTGCGGGGG +
Preference number: 3 (lower is better)
Translates to: IPHPQTYDSTMAKAVTRELEKGT*LSGLRG
Trigger: CCCCCGCAAACCACTCAGCAAAGTGCCTTTCTCCAA...CTCCCTGGTCACCGCCTTCGCCATGGTAGAGTCATAGGTCTGAGGATGAGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCTTACGCCAGGAAAGGTaGTCAGGGGAGTCTGTGATG +
Preference number: 3 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRALRQER*SGESVM
Trigger: CATCACAGACTCCCCTGACAACCTTTCCTGGCGTAA...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp GGGAGATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTTTGGAGAAAGGCACTTaGCTGAGTGGTTTGCGGGGG +
Preference number: 3 (lower is better)
Translates to: GRCLPHPWVWCRQMASHSLEKGT*LSGLRG
Trigger: CCCCCGCAAACCACTCAGCAAAGTGCCTTTCTCCAA...AGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTGCACAGGTACACAGTaGCAGTCCACTGACATAAAT +
Preference number: 3 (lower is better)
Translates to: LLPNLTLAGKALLSSLWICTGTQ*QSTDIN
Trigger: ATTTATGTCAGTGGACTGCAACTGTGTACCTGTGCA...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR GCA 72 bp CTCTGGTCAAAGGGGTTGATGAGTGGGAGGCCTGAGTaGTTAGGCAGTTTATGGCCATATAGGGTGAGAGGG +
Preference number: 3 (lower is better)
Translates to: LWSKGLMSGRPE*LGSLWPYRVRG
Trigger: CCCTCTCACCCTATATGGCCATAAACTGCCTAAGCACTCAGGCCTCCCACTCATCAACCCCTTTGACCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 72 bp GAGCAAGCAGTTGCCATGGAAACCATGTTACTTGTATaGTCCCGGATCCCGGTGATCCGCCCTCCTAGATCA +
Preference number: 3 (lower is better)
Translates to: EQAVAMETMLLV*SRIPVIRPPRS
Trigger: TGATCTAGGAGGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACTGCTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp CTGTTAGAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCGGGGACTGTAGCAGGTaGCTGGAATGTCCAATTATG +
Preference number: 3 (lower is better)
Translates to: LLENPGARVTTKCPPSTGGDCSR*LECPIM
Trigger: CATAATTGGACATTCCAGCAACCTGCTACAGTCCCC...GCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTCTAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp GAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCCTAAAGGGGGACTGTAGCAGGTaGCTGGAATGTCCAATTATG +
Preference number: 3 (lower is better)
Translates to: ENPGARVTTKCPPSTGLKGDCSR*LECPIM
Trigger: CATAATTGGACATTCCAGCAACCTGCTACAGTCCCC...CTTTAGGCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCCAGAGGCACAGAAACTaGGTGTGTCTGTATCAAGAC +
Preference number: 3 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRAQRHRN*VCLYQD
Trigger: GTCTTGATACAGACACACCAAGTTTCTGTGCCTCTG...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp CCAGAGTGCTTCTTTCTCTGGTCAAAGGGGTTGATGAGTGGGAGGCCTGAGTGCCACACTTTAAACATCTaGGCACAGGTGAGGGGTCAG +
Preference number: 3 (lower is better)
Translates to: PECFFLWSKGLMSGRPECHTLNI*AQVRGQ
Trigger: CTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTG...GCACTCAGGCCTCCCACTCATCAACCCCTTTGACCAGAGAAAGAAGCACTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCACCACCAAGAGCTCTTaGTTCTTGCTTGGAGAAAGG +
Preference number: 3 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRATTKSS*FLLGER
Trigger: CCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGT...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 72 bp GATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATaGCAAGTCATTCTGTTATGTGAAGGGCACAGCCAG +
Preference number: 3 (lower is better)
Translates to: DVFHIPGFGAGR*QVILLCEGHSQ
Trigger: CTGGCTGTGCCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp CCAGAGTGCTTCTTTCTCTGGTCAAAGGGGTTGATGAGTGGGAGGCCTGAGTGCTGGTGTATGGGGGCCTaGCTGGTTAGGAAATTGTAT +
Preference number: 3 (lower is better)
Translates to: PECFFLWSKGLMSGRPECWCMGA*LVRKLY
Trigger: ATACAATTTCCTAACCAGCAAGGCCCCCATACACCA...GCACTCAGGCCTCCCACTCATCAACCCCTTTGACCAGAGAAAGAAGCACTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR CAA 90 bp CTGTTAGAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCGCTCTTTGTTCTTGCTaGGAGAAAGGCACTTTGCTG +
Preference number: 3 (lower is better)
Translates to: LLENPGARVTTKCPPSTGALCSC*EKGTLL
Trigger: CAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGC...GCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTCTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGGACAGTATCCAAGAATaGTCCACGTGGTCCCTGGGA +
Preference number: 3 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMDSIQE*STWSLG
Trigger: TCCCAGGGACCACGTGGACAATTCTTGGATACTGTC...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR CAA 90 bp CTGTTAGAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCTGCACAGGTACACAGTaGCAGTCCACTGACATAAAT +
Preference number: 3 (lower is better)
Translates to: LLENPGARVTTKCPPSTGCTGTQ*QSTDIN
Trigger: ATTTATGTCAGTGGACTGCAACTGTGTACCTGTGCA...GCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTCTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR TCA 72 bp CTGAGAAGTGAGTTTCTGGGTGTTTCATCCCTGGGGTaGGAGCAAGTCCATTGGATTAGGAGACAGCAGGGA +
Preference number: 3 (lower is better)
Translates to: LRSEFLGVSSLG*EQVHWIRRQQG
Trigger: TCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACCCCAGGGATGAAACACCCAGAAACTCACTTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR TCA 72 bp TCTTCTGAGTCATCGGCTGTGGAAGTGACTGAGAAGTaGGTTTCTGGGTGTTTCATCCCTGGGGTGAGAGCA +
Preference number: 3 (lower is better)
Translates to: SSESSAVEVTEK*VSGCFIPGVRA
Trigger: TGCTCTCACCCCAGGGATGAAACACCCAGAAACTCACTTCTCAGTCACTTCCACAGCCGATGACTCAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR TCA 72 bp CTGGGTTTGGCTCTTCTGAGTCATCGGCTGTGGAAGTaGCTGAGAAGTGAGTTTCTGGGTGTTTCATCCCTG +
Preference number: 3 (lower is better)
Translates to: LGLALLSHRLWK*LRSEFLGVSSL
Trigger: CAGGGATGAAACACCCAGAAACTCACTTCTCAGTCACTTCCACAGCCGATGACTCAGAAGAGCCAAACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR TCA 72 bp TCTGGTCTCCAAGGCCATCTGTTTTGCAAGCAAGGGTaGGACAGCCACATTCCTCATCCTCAGACCTATGAC +
Preference number: 3 (lower is better)
Translates to: SGLQGHLFCKQG*DSHIPHPQTYD
Trigger: GTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCTTGCAAAACAGATGGCCTTGGAGACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATCAGAGGCACAGAAACTaGGTGTGTCTGTATCAAGAC +
Preference number: 3 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDQRHRN*VCLYQD
Trigger: GTCTTGATACAGACACACCAAGTTTCTGTGCCTCTG...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp CACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGCAGAGGCACAGAAACTaGGTGTGTCTGTATCAAGAC +
Preference number: 3 (lower is better)
Translates to: HIPGFGAGRWQVILLCEGQRHRN*VCLYQD
Trigger: GTCTTGATACAGACACACCAAGTTTCTGTGCCTCTG...CCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACCAGAGGCACAGAAACTaGGTGTGTCTGTATCAAGAC +
Preference number: 3 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDQRHRN*VCLYQD
Trigger: GTCTTGATACAGACACACCAAGTTTCTGTGCCTCTG...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR CAA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATCTGTGTGCAAGGCACTaGCCTGAGCTTCAATATAAA +
Preference number: 3 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDLCARH*PELQYK
Trigger: TTTATATTGAAGCTCAGGCAAGTGCCTTGCACACAG...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR TCA 72 bp GAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTaGGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGT +
Preference number: 3 (lower is better)
Translates to: ELFVLAWRKALC*VVCGGNVSQRG
Trigger: ACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR GCA 72 bp GTCTGCAGTAAGGAGCATTGCTATTGGACACATAGCTaGCAAGACAGTATCCAAGAATTGTCCACGTGGTCC +
Preference number: 3 (lower is better)
Translates to: VCSKEHCYWTHS*QDSIQELSTWS
Trigger: GGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATAGCAATGCTCCTTACTGCAGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR GCA 72 bp AGCTTGGACCCTTTATATTTTTCTTGGAAAGGTGGCTaGCATTTTTCTACCTTTCTCCCTCCCTGCTCCCCC +
Preference number: 3 (lower is better)
Translates to: SLDPLYFSWKGG*HFSTFLPPCSP
Trigger: GGGGGAGCAGGGAGGGAGAAAGGTAGAAAAATGGCAGCCACCTTTCCAAGAAAAATATAAAGGGTCCAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 72 bp ACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCATaGAAACCATGTTACTTGTATGGTCCCGGATCCCGG +
Preference number: 3 (lower is better)
Translates to: TAVLIQRSKQLP*KPCYLYGPGSR
Trigger: CCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 72 bp TATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTaGTCTCCAAGGCCATCTGTTTTGCAAGCAAGGGTG +
Preference number: 3 (lower is better)
Translates to: YIFPVAGTFEGV*SPRPSVLQARV
Trigger: CACCCTTGCTTGCAAAACAGATGGCCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp GCTATTGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCAGGTTTGTTCCTTGGTaGAGTAGTTACTCTGTGGAC +
Preference number: 3 (lower is better)
Translates to: AIGHIAAKTVSKNCPRGPRFVPW*SSYSVD
Trigger: GTCCACAGAGTAACTACTCAACCAAGGAACAAACCT...GGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp TCTCTATGTGACAAGGGGATAGAGAACCAGAGTGCTTCTTTCTCTGGTCAAAGGCACACTTTAAACATCTaGGCACAGGTGAGGGGTCAG +
Preference number: 3 (lower is better)
Translates to: SLCDKGIENQSASFSGQRHTLNI*AQVRGQ
Trigger: CTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTG...CCTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATCCCCTTGTCACATAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTCACACTTTAAACATCTaGGCACAGGTGAGGGGTCAG +
Preference number: 3 (lower is better)
Translates to: FAEWFAGVMFHREVLDHIHTLNI*AQVRGQ
Trigger: CTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTG...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR CAA 90 bp TCTCTATGTGACAAGGGGATAGAGAACCAGAGTGCTTCTTTCTCTGGTCAAAGGACATCACTTCCAGTGTaGCCTTCTGTGAGACTGCAC +
Preference number: 3 (lower is better)
Translates to: SLCDKGIENQSASFSGQRTSLPV*PSVRLH
Trigger: GTGCAGTCTCACAGAAGGCAACACTGGAAGTGATGT...CCTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATCCCCTTGTCACATAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp ATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTGCTGTCTTACCTGCTACCTGAATTaGTGTGTGTGTGTGTTACGT +
Preference number: 3 (lower is better)
Translates to: IVPGDRGLVMAMTTDCCLTCYLN*CVCVLR
Trigger: ACGTAACACACACACACACAAATTCAGGTAGCAGGT...AAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR CAA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGTTTCACAGAGAGGTCTaGGATCACATTAAACACCTC +
Preference number: 3 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMFHREV*DHIKHL
Trigger: GAGGTGTTTAATGTGATCCAAGACCTCTCTGTGAAA...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR GCA 72 bp GGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTaGTGTCTTAATTCAAAGGAGCAAGCAGTTGCCATG +
Preference number: 3 (lower is better)
Translates to: GDRGLVMAMTTD*CLNSKEQAVAM
Trigger: CATGGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 72 bp TCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTaGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTG +
Preference number: 3 (lower is better)
Translates to: SLFLLGERHFAE*FAGVMFHREVL
Trigger: CAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR CAA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTAGGTTTGTTCCTTGGTaGAGTAGTTACTCTGTGGAC +
Preference number: 3 (lower is better)
Translates to: FAEWFAGVMFHREVLDHIRFVPW*SSYSVD
Trigger: GTCCACAGAGTAACTACTCAACCAAGGAACAAACCT...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACATGGATAAATGTTCTTaGTGCTTTGCATGTGGGGTA +
Preference number: 3 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDMDKCS*CFACGV
Trigger: TACCCCACATGCAAAGCACAAAGAACATTTATCCAT...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp GTGGGCTTCCATAATTTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTATGAGCAGAATATACTaGCCCACGTACCTGCTACCT +
Preference number: 3 (lower is better)
Translates to: VGFHNFLAVTTKSSLFLLMSRIY*PTYLLP
Trigger: AGGTAGCAGGTACGTGGGCAAGTATATTCTGCTCAT...AAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAAATTATGGAAGCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp TCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATAGAGGCCTTGTCATAGCCAATGACCATTaGATGAGCAGAATATACTTG +
Preference number: 3 (lower is better)
Translates to: SIGLGDSRDIVPGDRGLVIANDH*MSRIYL
Trigger: CAAGTATATTCTGCTCATCAAATGGTCATTGGCTAT...GACAAGGCCTCTATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR CAA 90 bp TTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTTGGTGTATGGGGGCCTaGCTGGTTAGGAAATTGTAT +
Preference number: 3 (lower is better)
Translates to: FLAVTTKSSLFLLGERHFWCMGA*LVRKLY
Trigger: ATACAATTTCCTAACCAGCAAGGCCCCCATACACCA...AAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp CTCCTTTCATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTGACATCACTTCCAGTGTaGCCTTCTGTGAGACTGCAC +
Preference number: 3 (lower is better)
Translates to: LLSCTCLFNKTFRAYPALTSLPV*PSVRLH
Trigger: GTGCAGTCTCACAGAAGGCAACACTGGAAGTGATGT...CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR TCA 72 bp ACATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATaGCAACTGACTGCTGTCTTAATTCAAAGGAGCAAG +
Preference number: 3 (lower is better)
Translates to: TLCLEIEALSWQ*QLTAVLIQRSK
Trigger: CTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR GCA 72 bp CCTCACATACCTCAAGGCACATGTGTCACCTACATGTaGTCTCCAGCATTAAACACCCAATTTCATCCATTG +
Preference number: 3 (lower is better)
Translates to: PHIPQGTCVTYM*SPALNTQFHPL
Trigger: CAATGGATGAAATTGGGTGTTTAATGCTGGAGAGCACATGTAGGTGACACATGTGCCTTGAGGTATGTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR CCA 72 bp GTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTaGGACTCCTCTAGTTACGCCAGGAAAGGTTGTCAG +
Preference number: 3 (lower is better)
Translates to: VYLTKRLGPILH*DSSSYARKGCQ
Trigger: CTGACAACCTTTCCTGGCGTAACTAGAGGAGTCCCAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGATGGATAAATGTTCTTaGTGCTTTGCATGTGGGGTA +
Preference number: 3 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRMDKCS*CFACGV
Trigger: TACCCCACATGCAAAGCACAAAGAACATTTATCCAT...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR CAA 90 bp AGCAGAATATACTTGCCCACGTACCTGCTACCTGAATTTGTGTGTGTGTGTGTTTGCATGTGCACACACTaGGGAACCATATTGAGATGT +
Preference number: 3 (lower is better)
Translates to: SRIYLPTYLLPEFVCVCVCMCTH*GTILRC
Trigger: ACATCTCAATATGGTTCCCAAGTGTGTGCACATGCA...AACACACACACACACAAATTCAGGTAGCAGGTACGTGGGCAAGTATATTCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp TTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTTGCATGTGCACACACTaGGGAACCATATTGAGATGT +
Preference number: 3 (lower is better)
Translates to: FLAVTTKSSLFLLGERHFCMCTH*GTILRC
Trigger: ACATCTCAATATGGTTCCCAAGTGTGTGCACATGCA...AAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR CCA 72 bp GCATGCATCTGTAACCTGAGTGGTTTATGGAATAGATaGTGTATGGGGGCCTTGCTGGTTAGGAAATTGTAT +
Preference number: 3 (lower is better)
Translates to: ACICNLSGLWNR*CMGALLVRKLY
Trigger: ATACAATTTCCTAACCAGCAAGGCCCCCATACACCATCTATTCCATAAACCACTCAGGTTACAGATGCATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp CTCCTTTCATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTGAATGTTCTTTGTGCTTaGCATGTGGGGTATGCCAGA +
Preference number: 3 (lower is better)
Translates to: LLSCTCLFNKTFRAYPALNVLCA*HVGYAR
Trigger: TCTGGCATACCCCACATGCAAAGCACAAAGAACATT...CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR CAA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATACCTGCTACCTGAATTaGTGTGTGTGTGTGTTACGT +
Preference number: 3 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHTCYLN*CVCVLR
Trigger: ACGTAACACACACACACACAAATTCAGGTAGCAGGT...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGGGGACTGTAGCAGGTaGCTGGAATGTCCAATTATG +
Preference number: 3 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPGDCSR*LECPIM
Trigger: CATAATTGGACATTCCAGCAACCTGCTACAGTCCCC...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR TCA 72 bp GGGGCCTTGCTGGTTAGGAAATTGTATATATGTGTCTaGATCTGGCAAGGCTTTCCCATGAGACATTTTTGT +
Preference number: 3 (lower is better)
Translates to: GALLVRKLYICV*IWQGFPMRHFC
Trigger: ACAAAAATGTCTCATGGGAAAGCCTTGCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGGCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR CCA 72 bp GTGGTTTATGGAATAGATGGTGTATGGGGGCCTTGCTaGTTAGGAAATTGTATATATGTGTCTGAATCTGGC +
Preference number: 3 (lower is better)
Translates to: VVYGIDGVWGPC*LGNCIYVSESG
Trigger: GCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGGCCCCCATACACCATCTATTCCATAAACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp AACACCCAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATAGGTTTGTTCCTTGGTaGAGTAGTTACTCTGTGGAC +
Preference number: 3 (lower is better)
Translates to: NTQFHPLQQLVGSLRREDRFVPW*SSYSVD
Trigger: GTCCACAGAGTAACTACTCAACCAAGGAACAAACCT...ATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp GTGGGCTTCCATAATTTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTATGGATAAATGTTCTTaGTGCTTTGCATGTGGGGTA +
Preference number: 3 (lower is better)
Translates to: VGFHNFLAVTTKSSLFLLMDKCS*CFACGV
Trigger: TACCCCACATGCAAAGCACAAAGAACATTTATCCAT...AAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAAATTATGGAAGCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp TCTCTATGTGACAAGGGGATAGAGAACCAGAGTGCTTCTTTCTCTGGTCAAAGGCACTTGGGAACCATATaGAGATGTATGGATAAATGT +
Preference number: 3 (lower is better)
Translates to: SLCDKGIENQSASFSGQRHLGTI*RCMDKC
Trigger: ACATTTATCCATACATCTCAATATGGTTCCCAAGTG...CCTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATCCCCTTGTCACATAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR CAA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGTGCATGTGCACACACTaGGGAACCATATTGAGATGT +
Preference number: 3 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVCMCTH*GTILRC
Trigger: ACATCTCAATATGGTTCCCAAGTGTGTGCACATGCA...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGACCTGCTACCTGAATTaGTGTGTGTGTGTGTTACGT +
Preference number: 3 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVTCYLN*CVCVLR
Trigger: ACGTAACACACACACACACAAATTCAGGTAGCAGGT...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTTGGTGTATGGGGGCCTaGCTGGTTAGGAAATTGTAT +
Preference number: 3 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPWCMGA*LVRKLY
Trigger: ATACAATTTCCTAACCAGCAAGGCCCCCATACACCA...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGTTTCACAGAGAGGTCTaGGATCACATTAAACACCTC +
Preference number: 3 (lower is better)
Translates to: AGLNYDSQGHLLENPGARFHREV*DHIKHL
Trigger: GAGGTGTTTAATGTGATCCAAGACCTCTCTGTGAAA...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp CTCCTTTCATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTGTTTCACAGAGAGGTCTaGGATCACATTAAACACCTC +
Preference number: 3 (lower is better)
Translates to: LLSCTCLFNKTFRAYPALFHREV*DHIKHL
Trigger: GAGGTGTTTAATGTGATCCAAGACCTCTCTGTGAAA...CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CCA 72 bp AATACAATAAAAATACCAAGCAGTTCATCCTATAAGTaGATTAACTCTGCTTCCCAACCTCACTCTGGCGGG +
Preference number: 3 (lower is better)
Translates to: NTIKIPSSSSYK*INSASQPHSGG
Trigger: CCCGCCAGAGTGAGGTTGGGAAGCAGAGTTAATCCACTTATAGGATGAACTGCTTGGTATTTTTATTGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR-3UTR CAA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTATGAGCAGAATATACTaGCCCACGTACCTGCTACCT +
Preference number: 3 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCMSRIY*PTYLLP
Trigger: AGGTAGCAGGTACGTGGGCAAGTATATTCTGCTCAT...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR-3UTR CAA 90 bp GTGGGCTTCCATAATTTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTATAGCCAATGACCATTaGATGAGCAGAATATACTTG +
Preference number: 3 (lower is better)
Translates to: VGFHNFLAVTTKSSLFLLIANDH*MSRIYL
Trigger: CAAGTATATTCTGCTCATCAAATGGTCATTGGCTAT...AAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAAATTATGGAAGCCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGCACTTGGGAACCATATaGAGATGTATGGATAAATGT +
Preference number: 3 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSHLGTI*RCMDKC
Trigger: ACATTTATCCATACATCTCAATATGGTTCCCAAGTG...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATATAGCCAATGACCATTaGATGAGCAGAATATACTTG +
Preference number: 3 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHIANDH*MSRIYL
Trigger: CAAGTATATTCTGCTCATCAAATGGTCATTGGCTAT...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR-3UTR CAA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTACCCAATTTCATCCATaGCAGCAATTAGTGGGCTCA +
Preference number: 3 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCTQFHP*QQLVGS
Trigger: TGAGCCCACTAATTGCTGCAATGGATGAAATTGGGT...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR TCA 72 bp GTGTTACGTGCATGTGCACACACTTGGGAACCATATTaGGATGTATGGATAAATGTTCTTTGTGCTTTGCAT +
Preference number: 3 (lower is better)
Translates to: VLRACAHTWEPY*DVWINVLCALH
Trigger: ATGCAAAGCACAAAGAACATTTATCCATACATCTCAATATGGTTCCCAAGTGTGTGCACATGCACGTAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR TCA 72 bp GTCACATGTGGCTATTGGTACCATATTGAACCATATTaGACAGTGTACACACACTTACACACACACATACAC +
Preference number: 3 (lower is better)
Translates to: VTCGYWYHIEPY*TVYTHLHTHIH
Trigger: GTGTATGTGTGTGTGTAAGTGTGTGTACACTGTTCAATATGGTTCAATATGGTACCAATAGCCACATGTGAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGTGCACAGGTACACAGTaGCAGTCCACTGACATAAAT +
Preference number: 3 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKCTGTQ*QSTDIN
Trigger: ATTTATGTCAGTGGACTGCAACTGTGTACCTGTGCA...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR CCA 72 bp CAAATACTATACAGCTTGGACCCTTTATATTTTTCTTaGAAAGGTGGCTGCCATTTTTCTACCTTTCTCCCT +
Preference number: 3 (lower is better)
Translates to: QILYSLDPLYFS*KGGCHFSTFLP
Trigger: AGGGAGAAAGGTAGAAAAATGGCAGCCACCTTTCCAAGAAAAATATAAAGGGTCCAAGCTGTATAGTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR-3UTR CAA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTCACTTGGGAACCATATaGAGATGTATGGATAAATGT +
Preference number: 3 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCHLGTI*RCMDKC
Trigger: ACATTTATCCATACATCTCAATATGGTTCCCAAGTG...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR TCA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCGGTTGCTGCCCCGTCTaGCAGCGCCCCGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLPNLTLAGKALLSSLWIGCCPV*QRPGPW
Trigger: CCAGGGCCCGGGGCGCTGTCAGACGGGGCAGCAACC...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000545251.6
CDS-3UTR GCA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCGCCCTCTGTGTTCCCTaGCTTCCTACGGGCCGACGC +
Preference number: 4 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRAALCVP*LPTGRR
Trigger: GCGTCGGCCCGTAGGAAGGCAGGGAACACAGAGGGC...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444639.5
CDS-3UTR CCA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCGGGAAAGGCCTCCTCTaGCTGCCGTCCGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPGKGLL*LPSGAW
Trigger: CCAGGCTCCGGACGGCAGCCAGAGGAGGCCTTTCCC...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGAACATCTTGGCACAGGTaGGGGGTCAGAGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGTSWHR*GVRGTE
Trigger: TTCTGTGCCTCTGACCCCTCACCTGTGCCAAGATGT...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp ATTCCTCATCCTCAGACCTATGACTCTACCATGGCGAAGGCGGTGACCAGGGAGGGCAGCTTGTCCTGGTaGGCAGTGGCAGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: IPHPQTYDSTMAKAVTREGSLSW*AVAVVG
Trigger: CCCCACAACTGCCACTGCTCACCAGGACAAGCTGCC...CTCCCTGGTCACCGCCTTCGCCATGGTAGAGTCATAGGTCTGAGGATGAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGACTTACCCTCCCCAGATaGGTCAAGCAGTCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGLTLPR*VKQSLV
Trigger: GACCAGAGACTGCTTGACTCATCTGGGGAGGGTAAG...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGAAGTCATTCTGTTATGTaGAGGGCACAGCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGSHSVM*RAQPEA
Trigger: GGCCTCTGGCTGTGCCCTTCACATAACAGAATGACT...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCAGCAGTCTCTGGTCCTaGGGTCCCATGGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPSSLWS*GPMGCQ
Trigger: CTGGCAACCCATGGGACCTCAGGACCAGAGACTGCT...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCCTAAAGCGTGGTCCCTGGGACTaGCCTCCACTGGGACACTTA +
Preference number: 4 (lower is better)
Translates to: ENPGARVTTKCPPSTGLKRGPWD*PPLGHL
Trigger: TAAGTGTCCCAGTGGAGGGCAGTCCCAGGGACCACG...CTTTAGGCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGACATCCCTGGGTTTGGTaGAGGCAGATGGCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGHPWVW*RQMASH
Trigger: ATGACTTGCCATCTGCCTGCACCAAACCCAGGGATG...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCAATGGCCAGCCAGCTTaGGGAGCCTCCTTCCACGTT +
Preference number: 4 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRANGQPA*GASFHV
Trigger: AACGTGGAAGGAGGCTCCCCAAGCTGGCTGGCCATT...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTGTCTTCCACATCCCTaGGTTTGGTGCAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: LLPNLTLAGKALLSSLWICLPHP*VWCRQM
Trigger: CATCTGCCTGCACCAAACCCAGGGATGTGGAAGACA...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGGTTTGCGGGGGAAAGGCCTCCTCTaGCTGCCGTCCGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PRALCSCLEKGTLLSGLRGKGLL*LPSGAW
Trigger: CCAGGCTCCGGACGGCAGCCAGAGGAGGCCTTTCCC...CCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGAAGAAAGGCACTTTGCTaGGTGGTTTGCGGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGRKALC*VVCGGN
Trigger: ATTACCCCCGCAAACCACTCAGCAAAGTGCCTTTCT...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCCCATGGCGAAGGCGGTaGCCAGGGAGGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVPWRRR*PGRAGT
Trigger: TGTCCCAGCCCTCCCTGGTCACCGCCTTCGCCATGG...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCCTAAAGAATGGCCAGCCAGCTTaGGGAGCCTCCTTCCACGTT +
Preference number: 4 (lower is better)
Translates to: ENPGARVTTKCPPSTGLKNGQPA*GASFHV
Trigger: AACGTGGAAGGAGGCTCCCCAAGCTGGCTGGCCATT...CTTTAGGCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CCAGAGTGCTTCTTTCTCTGGTCAAAGGGGTTGATGAGTGGGAGGCCTGAGTGCGTTTGGGCATGCCACTaGCAGCACCTCCACACACAG +
Preference number: 4 (lower is better)
Translates to: PECFFLWSKGLMSGRPECVWACH*QHLHTQ
Trigger: CTGTGTGTGGAGGTGCTGCCAGTGGCATGCCCAAAC...GCACTCAGGCCTCCCACTCATCAACCCCTTTGACCAGAGAAAGAAGCACTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCCTTACAAGCAGGTCCTaGGCTCAAAAGGATGCAACC +
Preference number: 4 (lower is better)
Translates to: LLPNLTLAGKALLSSLWILTSRS*AQKDAT
Trigger: GGTTGCATCCTTTTGAGCCCAGGACCTGCTTGTAAG...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp CTGTTAGAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCGATGATCACCAAGAGTaGCAGGCCCAGGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: LLENPGARVTTKCPPSTGDDHQE*QAQEDS
Trigger: GGAGTCCTCCTGGGCCTGCCACTCTTGGTGATCATC...GCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTCTAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGACCATCTGGAGAAGCTTaGGTTGAGCAGAGATCCAGA +
Preference number: 4 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGPSGEA*VEQRSR
Trigger: TCTGGATCTCTGCTCAACCCAAGCTTCTCCAGATGG...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CCAGAGTGCTTCTTTCTCTGGTCAAAGGGGTTGATGAGTGGGAGGCCTGAGTGCGGGCCTATCCTGCACTaGGACTCCTCTAGTTACGCC +
Preference number: 4 (lower is better)
Translates to: PECFFLWSKGLMSGRPECGPILH*DSSSYA
Trigger: GGCGTAACTAGAGGAGTCCCAGTGCAGGATAGGCCC...GCACTCAGGCCTCCCACTCATCAACCCCTTTGACCAGAGAAAGAAGCACTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp ATTCCTCATCCTCAGACCTATGACTCTACCATGGCGAAGGCGGTGACCAGGGAGGGGCCTATCCTGCACTaGGACTCCTCTAGTTACGCC +
Preference number: 4 (lower is better)
Translates to: IPHPQTYDSTMAKAVTREGPILH*DSSSYA
Trigger: GGCGTAACTAGAGGAGTCCCAGTGCAGGATAGGCCC...CTCCCTGGTCACCGCCTTCGCCATGGTAGAGTCATAGGTCTGAGGATGAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp TGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCTGGGAGGGCTGGGGCTGGTCTaGTGCAGGCAGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: WTHSCQDSIQELSTWSLGGLGLV*CRQKRE
Trigger: TTCCCTCTTCTGCCTGCACCAGACCAGCCCCAGCCC...TCCCAGGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR CCA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCAGAGGAATAAAGGGCTaGGGCTGGTCTGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPRGIKG*GWSGAG
Trigger: GCCTGCACCAGACCAGCCCCAGCCCTTTATTCCTCT...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCCTAAAGGGTCCTGAGGTCCCATaGGTTGCCAGTGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: ENPGARVTTKCPPSTGLKGPEVP*VASGSS
Trigger: TGAACTGCCACTGGCAACCCATGGGACCTCAGGACC...CTTTAGGCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGAACCTTTGAGGGAGTCTaGTCTCCAAGGCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGTFEGV*SPRPSV
Trigger: AACAGATGGCCTTGGAGACCAGACTCCCTCAAAGGT...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCGGCTGTGGAAGTGACTaGGAAGTGAGTTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRAGCGSD*EVSFWV
Trigger: CACCCAGAAACTCACTTCTCAGTCACTTCCACAGCC...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCTCTGCATCCCACCTGTaGCATACCGTGCACACATCA +
Preference number: 4 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRASASHL*HTVHTS
Trigger: TGATGTGTGCACGGTATGGCACAGGTGGGATGCAGA...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCGTGTGGGTTCCTTTTTaGTTGCCTCTGCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRAVWVPF*LPLHSH
Trigger: GTGGGAGTGCAGAGGCAACCAAAAAGGAACCCACAC...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423313.6
CDS-3UTR CCA 90 bp GGGAGATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTCACACAGCAGCAAAATaGCCAGCCAGCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GRCLPHPWVWCRQMASHSHTAAK*PASLGS
Trigger: GCTCCCCAAGCTGGCTGGCCATTTTGCTGCTGTGTG...AGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp TTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCACACAGCAGCAAAATaGCCAGCCAGCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LVQADGKSFCYVKGTARGHTAAK*PASLGS
Trigger: GCTCCCCAAGCTGGCTGGCCATTTTGCTGCTGTGTG...GCCTCTGGCTGTGCCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTGCCTTCTTGGTGTTTaGTCAAGATGGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LLPNLTLAGKALLSSLWICLLGV*SRWCPR
Trigger: TCTGGGACACCATCTTGACCAAACACCAAGAAGGCA...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTGCTTAGGCAGTTTATaGCCATATAGGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLPNLTLAGKALLSSLWICLGSL*PYRVRG
Trigger: CCCTCTCACCCTATATGGCCATAAACTGCCTAAGCA...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGGGGCTGGGGCTGGTCTaGTGCAGGCAGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMGLGLV*CRQKRE
Trigger: TTCCCTCTTCTGCCTGCACCAGACCAGCCCCAGCCC...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp AGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATGACTCTACCATGGCCCATGGGTTGCCAGTaGCAGTTCAGGGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: SKGETATFLILRPMTLPWPMGCQ*QFRDRG
Trigger: GCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGG...CCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GGGAGATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGGTCCTGAGGTCCCATaGGTTGCCAGTGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GRCLPHPWVWCRQMASHSGPEVP*VASGSS
Trigger: TGAACTGCCACTGGCAACCCATGGGACCTCAGGACC...AGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTGGGAAAGGCCTCCTCTaGCTGCCGTCCGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FAEWFAGVMFHREVLDHIGKGLL*LPSGAW
Trigger: CCAGGCTCCGGACGGCAGCCAGAGGAGGCCTTTCCC...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGACACATCACAACCTTATaGCATCACTTCCAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGHITTL*HHFQCC
Trigger: GCAACACTGGAAGTGATGTCATAAGGTTGTGATGTG...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CTGTTAGAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCTGGGTTTGGCTCTTCTaGGTCATCGGCTGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LLENPGARVTTKCPPSTGWVWLF*VIGCGS
Trigger: ACTTCCACAGCCGATGACTCAGAAGAGCCAAACCCA...GCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTCTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp TTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTCCATGGCGAAGGCGGTaGCCAGGGAGGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: FLAVTTKSSLFLLGERHFPWRRR*PGRAGT
Trigger: TGTCCCAGCCCTCCCTGGTCACCGCCTTCGCCATGG...AAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATCTTTTTGGTTGCCTCTaGACTCCCACCCCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDLFGCL*TPTPSQ
Trigger: CTGGCTCGGGGTGGGAGTGCAGAGGCAACCAAAAAG...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423313.6
CDS-3UTR GCA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCCGTTACTTCTTGCTTTaGGTTGTCAGGGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRARYFLL*VVRGSR
Trigger: CCGAGATCCCCTGACAACGCAAAGCAAGAAGTAACG...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTGCAGTAAGGAGCATTaGTATTGGACACATAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLPNLTLAGKALLSSLWICSKEH*YWTHSC
Trigger: GCAGCTATGTGTCCAATAGCAATGCTCCTTACTGCA...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCGGTGTATGGGGGCCTTaGTGGTTAGGAAATTGTATA +
Preference number: 4 (lower is better)
Translates to: LLPNLTLAGKALLSSLWIGVWGP*WLGNCI
Trigger: TATACAATTTCCTAACCAGCAAGGCCCCCATACACC...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp ATTCCTCATCCTCAGACCTATGACTCTACCATGGCGAAGGCGGTGACCAGGGAGTCTGCATCCCACCTGTaGCATACCGTGCACACATCA +
Preference number: 4 (lower is better)
Translates to: IPHPQTYDSTMAKAVTRESASHL*HTVHTS
Trigger: TGATGTGTGCACGGTATGGCACAGGTGGGATGCAGA...CTCCCTGGTCACCGCCTTCGCCATGGTAGAGTCATAGGTCTGAGGATGAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp CCAGAGTGCTTCTTTCTCTGGTCAAAGGGGTTGATGAGTGGGAGGCCTGAGTGCCATCCCTGGGTTTGGTaGAGGCAGATGGCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: PECFFLWSKGLMSGRPECHPWVW*RQMASH
Trigger: ATGACTTGCCATCTGCCTGCACCAAACCCAGGGATG...GCACTCAGGCCTCCCACTCATCAACCCCTTTGACCAGAGAAAGAAGCACTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp AGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATGACTCTACCATGGAATGGCCAGCCAGCTTaGGGAGCCTCCTTCCACGTT +
Preference number: 4 (lower is better)
Translates to: SKGETATFLILRPMTLPWNGQPA*GASFHV
Trigger: AACGTGGAAGGAGGCTCCCCAAGCTGGCTGGCCATT...CCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp TTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCTTCCAGCTTTGGGTTTaGGCATGCCACTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LVQADGKSFCYVKGTARGFQLWV*ACHWQH
Trigger: GTGCTGCCAGTGGCATGCCCAAACCCAAAGCTGGAA...GCCTCTGGCTGTGCCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp AGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATGACTCTACCATGGGATGATCACCAAGAGTaGCAGGCCCAGGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: SKGETATFLILRPMTLPWDDHQE*QAQEDS
Trigger: GGAGTCCTCCTGGGCCTGCCACTCTTGGTGATCATC...CCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCGCCCCTCTTGCCTGGTaGGCTCCAGCAGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVAPLAW*APAAMA
Trigger: TGCCATTGCTGCTGGAGCCCACCAGGCAAGAGGGGC...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp ATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTGCTGTCTTCTGGCCCCTCTTGCCTaGTGGGCTCCAGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: IVPGDRGLVMAMTTDCCLLAPLA*WAPAAM
Trigger: CATTGCTGCTGGAGCCCACCAGGCAAGAGGGGCCAG...AAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGAGAGGAATAAAGGGCTaGGGCTGGTCTGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: HIPGFGAGRWQVILLCEGRGIKG*GWSGAG
Trigger: GCCTGCACCAGACCAGCCCCAGCCCTTTATTCCTCT...CCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp AGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATGACTCTACCATGGCTGCCGTCCGGAGCCTaGCTAAAGCTGCTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SKGETATFLILRPMTLPWLPSGA*LKLLRS
Trigger: ACTTCTGAGCAGCTTTAGCCAGGCTCCGGACGGCAG...CCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp AGGTATTACAAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTGGTTGCTGCCCCGTCTaGCAGCGCCCCGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RYYKLTLNNITYPTVTTVGCCPV*QRPGPW
Trigger: CCAGGGCCCGGGGCGCTGTCAGACGGGGCAGCAACC...AACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTTGTAATACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000545251.6
CDS-3UTR TCA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCCACGTACCTGCTACCTaGATTTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRAHVPAT*ICVCVC
Trigger: ACACACACACACACAAATTCAGGTAGCAGGTACGTG...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGAGGACGGACTTTGTCATaGGTTACAAGAAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGGRTLS*VTRKEL
Trigger: AAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCC...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CTGTTAGAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCTATGGCCATATAGGGTaGGAGGGCAAATGTGACTGG +
Preference number: 4 (lower is better)
Translates to: LLENPGARVTTKCPPSTGYGHIG*EGKCDW
Trigger: CCAGTCACATTTGCCCTCTCACCCTATATGGCCATA...GCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTCTAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCGGCAGCTTGTCCTGGTaGGCAGTGGCAGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVAGSLSW*AVAVVG
Trigger: CCCCACAACTGCCACTGCTCACCAGGACAAGCTGCC...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTGGTCCCGGATCCCGGTaGTCCGCCCTCCTAGATCAT +
Preference number: 4 (lower is better)
Translates to: FAEWFAGVMFHREVLDHIGPGSR*SALLDH
Trigger: ATGATCTAGGAGGGCGGATCACCGGGATCCGGGACC...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTCGCGGAAGGGCTTCCTaGAGGCCCAGGGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: FAEWFAGVMFHREVLDHIRGRAS*RPRESP
Trigger: AGGAGATTCCCTGGGCCTGCAGGAAGCCCTTCCGCG...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000545251.6
CDS-3UTR GCA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATTTGTTCTTCTCTGGCTaGTGGCCCCTCTTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDLFFSG*WPLLPG
Trigger: ACCAGGCAAGAGGGGCCAGCAGCCAGAGAAGAACAA...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGCGTGGTCCCTGGGACTaGCCTCCACTGGGACACTTA +
Preference number: 4 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRRGPWD*PPLGHL
Trigger: TAAGTGTCCCAGTGGAGGGCAGTCCCAGGGACCACG...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGAAAAGGAGCAAGCAGTTaGCATGGAAACCATGTTACT +
Preference number: 4 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGKGASS*HGNHVT
Trigger: AGTAACATGGTTTCCATGGCAACTGCTTGCTCCTTT...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp CCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGGTTTGCGGCTGGGGCTGGTCTGGTaGAGGCAGAAGAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: PRALCSCLEKGTLLSGLRLGLVW*RQKRES
Trigger: TGATTCCCTCTTCTGCCTGCACCAGACCAGCCCCAG...CCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCGCCCAGGGAATCTCCTaGTTGCTGCCCCGTCTGACA +
Preference number: 4 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVAQGIS*LLPRLT
Trigger: TGTCAGACGGGGCAGCAACCAGGAGATTCCCTGGGC...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000545251.6
CDS-3UTR CCA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACGTTTGGGCATGCCACTaGCAGCACCTCCACACACAG +
Preference number: 4 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDVWACH*QHLHTQ
Trigger: CTGTGTGTGGAGGTGCTGCCAGTGGCATGCCCAAAC...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACGATGATCACCAAGAGTaGCAGGCCCAGGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDDDHQE*QAQEDS
Trigger: GGAGTCCTCCTGGGCCTGCCACTCTTGGTGATCATC...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp TTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCGGGCTCCAGCAGCAATaGCAACAGATGAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LVQADGKSFCYVKGTARGGLQQQ*QQMKRS
Trigger: ACTCCTCTTCATCTGTTGCCATTGCTGCTGGAGCCC...GCCTCTGGCTGTGCCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GGGAGATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGGGCTCCAGCAGCAATaGCAACAGATGAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GRCLPHPWVWCRQMASHSGLQQQ*QQMKRS
Trigger: ACTCCTCTTCATCTGTTGCCATTGCTGCTGGAGCCC...AGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp TCTCTATGTGACAAGGGGATAGAGAACCAGAGTGCTTCTTTCTCTGGTCAAAGGCTGGCCCCTCTTGCCTaGTGGGCTCCAGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: SLCDKGIENQSASFSGQRLAPLA*WAPAAM
Trigger: CATTGCTGCTGGAGCCCACCAGGCAAGAGGGGCCAG...CCTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATCCCCTTGTCACATAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATCTTCTTGTTCTTCTCTaGCTGCTGGCCCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDLLVLL*LLAPLA
Trigger: GGCAAGAGGGGCCAGCAGCCAGAGAAGAACAAGAAG...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCAACCTGAGTGGTTTATaGAATAGATGGTGTATGGGG +
Preference number: 4 (lower is better)
Translates to: LLPNLTLAGKALLSSLWINLSGL*NRWCMG
Trigger: CCCCATACACCATCTATTCCATAAACCACTCAGGTT...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGTTCCCAACCTCACTCTaGCGGGGAAAGCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMFPTSL*RGKPSS
Trigger: TGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAA...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGTGTCCTGGTGAGCAGTaGCAGTTGTGGGGAGATGTC +
Preference number: 4 (lower is better)
Translates to: HIPGFGAGRWQVILLCEGCPGEQ*QLWGDV
Trigger: GACATCTCCCCACAACTGCCACTGCTCACCAGGACA...CCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CTGTTAGAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCACCATGTTACTTGTATaGTCCCGGATCCCGGTGATC +
Preference number: 4 (lower is better)
Translates to: LLENPGARVTTKCPPSTGTMLLV*SRIPVI
Trigger: GATCACCGGGATCCGGGACCATACAAGTAACATGGT...GCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTCTAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGGTTTGCGGGGTCCTGAGGTCCCATaGGTTGCCAGTGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PRALCSCLEKGTLLSGLRGPEVP*VASGSS
Trigger: TGAACTGCCACTGGCAACCCATGGGACCTCAGGACC...CCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTAATTTACATGTCCGTGACCAGGGAGGGCTaGGACATTTGTGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: HSGGESPPQLTVDLIYMSVTREG*DICVTE
Trigger: TTCTGTGACACAAATGTCCCAGCCCTCCCTGGTCAC...GGACATGTAAATTAGATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CAA 72 bp GGCAGTTGTGGGGAGATGTCTTCCACATCCCTGGGTTaGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTG +
Preference number: 4 (lower is better)
Translates to: GSCGEMSSTSLG*VQADGKSFCYV
Trigger: CACATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATCTCCCCACAACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp TTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCGTAGTAAACAATCGCTaGACACCCGCCCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: LVQADGKSFCYVKGTARGVVNNR*TPALCI
Trigger: AATGCACAGGGCGGGTGTTCAGCGATTGTTTACTAC...GCCTCTGGCTGTGCCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGAACCAAGCAGCCCAAGTaGGCAAATAGAATATATCTT +
Preference number: 4 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGTKQPK*ANRIYL
Trigger: AAGATATATTCTATTTGCTCACTTGGGCTGCTTGGT...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp AGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATGACTCTACCATGGGATGAGTGGGAGGCCTaGGTGCTTAGGCAGTTTATG +
Preference number: 4 (lower is better)
Translates to: SKGETATFLILRPMTLPWDEWEA*VLRQFM
Trigger: CATAAACTGCCTAAGCACTCAGGCCTCCCACTCATC...CCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTAGCAGTCTCTGGTCCTaGGGTCCCATGGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: FAEWFAGVMFHREVLDHISSLWS*GPMGCQ
Trigger: CTGGCAACCCATGGGACCTCAGGACCAGAGACTGCT...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGCCATGGCGAAGGCGGTaGCCAGGGAGGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVPWRRR*PGRAGT
Trigger: TGTCCCAGCCCTCCCTGGTCACCGCCTTCGCCATGG...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GCTATTGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCTGTAGCTGGCACCTTTaGGGGAGTCTGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: AIGHIAAKTVSKNCPRGPCSWHL*GSLVSK
Trigger: CTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACA...GGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR TCA 90 bp TGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCTGGGATGTGCATTCAGATCCTaGTCACCGCCCAGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: WTHSCQDSIQELSTWSLGCAFRS*SPPSLS
Trigger: CGAAAGACTGGGCGGTGATCAGGATCTGAATGCACA...TCCCAGGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545251.6
CDS-3UTR GCA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGAGATAAATGTTCTTTGTaGTTTGCATGTGGGGTATGC +
Preference number: 4 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGDKCSL*FACGVC
Trigger: GCATACCCCACATGCAAAGCACAAAGAACATTTATC...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCACCTGTGCCATACCGTaGACACATCACAACCTTATG +
Preference number: 4 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPTCAIP*THHNLM
Trigger: CATAAGGTTGTGATGTGTGCACGGTATGGCACAGGT...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp TGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCTGGGAAGTGGGAGGCCTGAGTaGTTAGGCAGTTTATGGCCA +
Preference number: 4 (lower is better)
Translates to: WTHSCQDSIQELSTWSLGSGRPE*LGSLWP
Trigger: TGGCCATAAACTGCCTAAGCACTCAGGCCTCCCACT...TCCCAGGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR GCA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGCTGGGGCTGGTCTGGTaGAGGCAGAAGAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRLGLVW*RQKRES
Trigger: TGATTCCCTCTTCTGCCTGCACCAGACCAGCCCCAG...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGGGAGACACACAGCAGCAAAATaGCCAGCCAGCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: HPLQQLVGSLRREDHSGRHTAAK*PASLGS
Trigger: GCTCCCCAAGCTGGCTGGCCATTTTGCTGCTGTGTG...TCTCCCCGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp AGCAGAATATACTTGCCCACGTACCTGCTACCTGAATTTGTGTGTGTGTGTGTTCTGGCCCCTCTTGCCTaGTGGGCTCCAGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: SRIYLPTYLLPEFVCVCVLAPLA*WAPAAM
Trigger: CATTGCTGCTGGAGCCCACCAGGCAAGAGGGGCCAG...AACACACACACACACAAATTCAGGTAGCAGGTACGTGGGCAAGTATATTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CCA 90 bp TTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCATCTGGAGAAGCTTaGGTTGAGCAGAGATCCAGA +
Preference number: 4 (lower is better)
Translates to: LVQADGKSFCYVKGTARGPSGEA*VEQRSR
Trigger: TCTGGATCTCTGCTCAACCCAAGCTTCTCCAGATGG...GCCTCTGGCTGTGCCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTAATTTACATGTCCGGAATAGATGGTGTATaGGGGCCTTGCTGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: HSGGESPPQLTVDLIYMSGIDGV*GPCWLG
Trigger: TCCTAACCAGCAAGGCCCCCATACACCATCTATTCC...GGACATGTAAATTAGATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp TCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATAGAGGCCTTGTCGGCCTAAAGTACACCTaGAGGGCAGGTGAGTACCAA +
Preference number: 4 (lower is better)
Translates to: SIGLGDSRDIVPGDRGLVGLKYT*RAGEYQ
Trigger: TTGGTACTCACCTGCCCTCCAGGTGTACTTTAGGCC...GACAAGGCCTCTATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCGAGTGCTTCTTTCTCTaGTCAAAGGGGTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRAECFFL*SKGLMS
Trigger: ACTCATCAACCCCTTTGACCAGAGAAAGAAGCACTC...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATGAGCAGTGGCAGTTGTaGGGAGATGTCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDEQWQL*GDVFHI
Trigger: GATGTGGAAGACATCTCCCCACAACTGCCACTGCTC...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGGGAGAGGGCCTATCCTGCACTaGGACTCCTCTAGTTACGCC +
Preference number: 4 (lower is better)
Translates to: HPLQQLVGSLRREDHSGRGPILH*DSSSYA
Trigger: GGCGTAACTAGAGGAGTCCCAGTGCAGGATAGGCCC...TCTCCCCGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCAAAAGGATGCAACCTTaGCCACTTGTAATTTATTCC +
Preference number: 4 (lower is better)
Translates to: LLPNLTLAGKALLSSLWIKRMQP*PLVIYS
Trigger: GGAATAAATTACAAGTGGTCAAGGTTGCATCCTTTT...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp CACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTAATTTACATGTCCCACGTACCTGCTACCTaGATTTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: HSGGESPPQLTVDLIYMSHVPAT*ICVCVC
Trigger: ACACACACACACACAAATTCAGGTAGCAGGTACGTG...GGACATGTAAATTAGATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp GCTATTGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCGATGAGTGGGAGGCCTaGGTGCTTAGGCAGTTTATG +
Preference number: 4 (lower is better)
Translates to: AIGHIAAKTVSKNCPRGPDEWEA*VLRQFM
Trigger: CATAAACTGCCTAAGCACTCAGGCCTCCCACTCATC...GGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR TCA 90 bp ATTCCTCATCCTCAGACCTATGACTCTACCATGGCGAAGGCGGTGACCAGGGAGGACAAACTCTCTATGTaGCAAGGGGATAGAGAACCA +
Preference number: 4 (lower is better)
Translates to: IPHPQTYDSTMAKAVTREDKLSM*QGDREP
Trigger: TGGTTCTCTATCCCCTTGTCACATAGAGAGTTTGTC...CTCCCTGGTCACCGCCTTCGCCATGGTAGAGTCATAGGTCTGAGGATGAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GGGAGATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTCTCCTAGATCATATCTaGCACTACGTCTCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GRCLPHPWVWCRQMASHSLLDHI*HYVSAV
Trigger: GACAGCTGAGACGTAGTGTCAGATATGATCTAGGAG...AGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCAAGAGAGTAACCATCTaGCTACATCAAGACTTTTCA +
Preference number: 4 (lower is better)
Translates to: LLPNLTLAGKALLSSLWIKRVTI*LHQDFS
Trigger: TGAAAAGTCTTGATGTAGTCAGATGGTTACTCTCTT...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATCGCGGAAGGGCTTCCTaGAGGCCCAGGGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHRGRAS*RPRESP
Trigger: AGGAGATTCCCTGGGCCTGCAGGAAGCCCTTCCGCG...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000545251.6
CDS-3UTR GCA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCGATAATGTACTTCCCTaGACAAAGTACATAGCCAAT +
Preference number: 4 (lower is better)
Translates to: LLPNLTLAGKALLSSLWIDNVLP*TKYIAN
Trigger: ATTGGCTATGTACTTTGTGCAGGGAAGTACATTATC...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCGGTGTATGGGGGCCTTaGTGGTTAGGAAATTGTATA +
Preference number: 4 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPGVWGP*WLGNCI
Trigger: TATACAATTTCCTAACCAGCAAGGCCCCCATACACC...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGACAGCAGGGACATTGTaGCTGGAGATAGAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMTAGTL*LEIEAL
Trigger: CAAGGCCTCTATCTCCAGGCACAATGTCCCTGCTGT...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGTTCCAGCTTTGGGTTTaGGCATGCCACTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRFQLWV*ACHWQH
Trigger: GTGCTGCCAGTGGCATGCCCAAACCCAAAGCTGGAA...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTGATGATCACCAAGAGTaGCAGGCCCAGGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: FAEWFAGVMFHREVLDHIDDHQE*QAQEDS
Trigger: GGAGTCCTCCTGGGCCTGCCACTCTTGGTGATCATC...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp CCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGGTTTGCGGGGGCTCCAGCAGCAATaGCAACAGATGAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PRALCSCLEKGTLLSGLRGLQQQ*QQMKRS
Trigger: ACTCCTCTTCATCTGTTGCCATTGCTGCTGGAGCCC...CCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGCCCCTCTTGCCTGGTaGGCTCCAGCAGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSAPLAW*APAAMA
Trigger: TGCCATTGCTGCTGGAGCCCACCAGGCAAGAGGGGC...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp CATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGGGAGACTTCTTGTTCTTCTCTaGCTGCTGGCCCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: HPLQQLVGSLRREDHSGRLLVLL*LLAPLA
Trigger: GGCAAGAGGGGCCAGCAGCCAGAGAAGAACAAGAAG...TCTCCCCGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTCAAGAATTGTCCACGTaGTCCCTGGGACTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: FAEWFAGVMFHREVLDHIQELST*SLGLPS
Trigger: GGAGGGCAGTCCCAGGGACCACGTGGACAATTCTTG...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCCAAGAATTGTCCACGTaGTCCCTGGGACTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVAQELST*SLGLPS
Trigger: GGAGGGCAGTCCCAGGGACCACGTGGACAATTCTTG...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp TGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCTGGGAGGAATAGATGGTGTATaGGGGCCTTGCTGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: WTHSCQDSIQELSTWSLGGIDGV*GPCWLG
Trigger: TCCTAACCAGCAAGGCCCCCATACACCATCTATTCC...TCCCAGGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CCA 90 bp CACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTAATTTACATGTCCAGGCACTTTGCTGAGTaGTTTGCGGGGGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: HSGGESPPQLTVDLIYMSRHFAE*FAGVMF
Trigger: AAACATTACCCCCGCAAACCACTCAGCAAAGTGCCT...GGACATGTAAATTAGATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp GGGAGATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTAGGCACTTTGCTGAGTaGTTTGCGGGGGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: GRCLPHPWVWCRQMASHSRHFAE*FAGVMF
Trigger: AAACATTACCCCCGCAAACCACTCAGCAAAGTGCCT...AGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCCTAAAGGAGTGCTTCTTTCTCTaGTCAAAGGGGTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: ENPGARVTTKCPPSTGLKECFFL*SKGLMS
Trigger: ACTCATCAACCCCTTTGACCAGAGAAAGAAGCACTC...CTTTAGGCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGTGTCTTCCACATCCCTaGGTTTGGTGCAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMCLPHP*VWCRQM
Trigger: CATCTGCCTGCACCAAACCCAGGGATGTGGAAGACA...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACGAGCAGTGGCAGTTGTaGGGAGATGTCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDEQWQL*GDVFHI
Trigger: GATGTGGAAGACATCTCCCCACAACTGCCACTGCTC...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp ATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTGCTGTCTTTGTCCTGGTGAGCAGTaGCAGTTGTGGGGAGATGTC +
Preference number: 4 (lower is better)
Translates to: IVPGDRGLVMAMTTDCCLCPGEQ*QLWGDV
Trigger: GACATCTCCCCACAACTGCCACTGCTCACCAGGACA...AAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGGGCTGGGGCTGGTCTaGTGCAGGCAGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: AGLNYDSQGHLLENPGARGLGLV*CRQKRE
Trigger: TTCCCTCTTCTGCCTGCACCAGACCAGCCCCAGCCC...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACCTGCCGTCCGGAGCCTaGCTAAAGCTGCTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHLPSGA*LKLLRS
Trigger: ACTTCTGAGCAGCTTTAGCCAGGCTCCGGACGGCAG...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp TGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCTGGGACAGTGTTGCCTTCTGTaGGACTGCACTGATGATTGT +
Preference number: 4 (lower is better)
Translates to: WTHSCQDSIQELSTWSLGQCCLL*DCTDDC
Trigger: ACAATCATCAGTGCAGTCTCACAGAAGGCAACACTG...TCCCAGGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR TCA 90 bp GGGAGATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTCACATCACAACCTTATaGCATCACTTCCAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: GRCLPHPWVWCRQMASHSHITTL*HHFQCC
Trigger: GCAACACTGGAAGTGATGTCATAAGGTTGTGATGTG...AGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp ATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATCTCGGGGAGAACTGGTaGGGTATTACAAGCTTACCC +
Preference number: 4 (lower is better)
Translates to: MSSTSLGLVQADGKSFCYLGENW*GITSLP
Trigger: GGGTAAGCTTGTAATACCTCACCAGTTCTCCCCGAG...ATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCCTCGGGGAGAACTGGTaGGGTATTACAAGCTTACCC +
Preference number: 4 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVLGENW*GITSLP
Trigger: GGGTAAGCTTGTAATACCTCACCAGTTCTCCCCGAG...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTATGGCCATATAGGGTaGGAGGGCAAATGTGACTGG +
Preference number: 4 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDYGHIG*EGKCDW
Trigger: CCAGTCACATTTGCCCTCTCACCCTATATGGCCATA...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp AACACCCAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATGGCAGCTTGTCCTGGTaGGCAGTGGCAGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: NTQFHPLQQLVGSLRREDGSLSW*AVAVVG
Trigger: CCCCACAACTGCCACTGCTCACCAGGACAAGCTGCC...ATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATGCCTTGTCATGGCAATaGCAACTGACTGCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDALSWQ*QLTAVL
Trigger: TAAGACAGCAGTCAGTTGTCATTGCCATGACAAGGC...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGGTTTGCGGCATCGGCTGTGGAAGTaGCTGAGAAGTGAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: PRALCSCLEKGTLLSGLRHRLWK*LRSEFL
Trigger: CAGAAACTCACTTCTCAGTCACTTCCACAGCCGATG...CCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGAGCAGTCTCTGGTCCTaGGGTCCCATGGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: AGLNYDSQGHLLENPGARSSLWS*GPMGCQ
Trigger: CTGGCAACCCATGGGACCTCAGGACCAGAGACTGCT...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTCTTACCCTCCCCAGATaGGTCAAGCAGTCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: FAEWFAGVMFHREVLDHILTLPR*VKQSLV
Trigger: GACCAGAGACTGCTTGACTCATCTGGGGAGGGTAAG...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp TTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGGGTTCCTTTTTGGTTaGCTCTGCACTCCCACCCCG +
Preference number: 4 (lower is better)
Translates to: FLAVTTKSSLFLLGERHFGFLFG*LCTPTP
Trigger: CGGGGTGGGAGTGCAGAGGCAACCAAAAAGGAACCC...AAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423313.6
CDS-3UTR GCA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACCGTTACTTCTTGCTTTaGGTTGTCAGGGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDRYFLL*VVRGSR
Trigger: CCGAGATCCCCTGACAACGCAAAGCAAGAAGTAACG...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp CACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTAATTTACATGTCCTTCCACGTTACTTCTTaGTTTGCGTTGTCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: HSGGESPPQLTVDLIYMSFHVTS*FALSGD
Trigger: ATCCCCTGACAACGCAAAGCAAGAAGTAACGTGGAA...GGACATGTAAATTAGATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp GGGAGATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTTGCAGTAAGGAGCATTaGTATTGGACACATAGCTGC +
Preference number: 4 (lower is better)
Translates to: GRCLPHPWVWCRQMASHSCSKEH*YWTHSC
Trigger: GCAGCTATGTGTCCAATAGCAATGCTCCTTACTGCA...AGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGAGGCATGCCTGGGTCTaGAGTAAGGAGCATTGCTAT +
Preference number: 4 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMRHAWV*SKEHCY
Trigger: ATAGCAATGCTCCTTACTGCAGACCCAGGCATGCCT...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp CCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGGTTTGCGGAGGCATGCCTGGGTCTaGAGTAAGGAGCATTGCTAT +
Preference number: 4 (lower is better)
Translates to: PRALCSCLEKGTLLSGLRRHAWV*SKEHCY
Trigger: ATAGCAATGCTCCTTACTGCAGACCCAGGCATGCCT...CCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp TTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCATGTTCTTTGTGCTTTaGATGTGGGGTATGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LVQADGKSFCYVKGTARGMFFVL*MWGMPE
Trigger: CTCTGGCATACCCCACATGCAAAGCACAAAGAACAT...GCCTCTGGCTGTGCCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCAGAAATAGGAAAGCATaGATCTGTAACCTGAGTGGT +
Preference number: 4 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRARNRKA*ICNLSG
Trigger: ACCACTCAGGTTACAGATGCATGCTTTCCTATTTCT...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCAGTGGGAGGCCTGAGTaGTTAGGCAGTTTATGGCCA +
Preference number: 4 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVSGRPE*LGSLWP
Trigger: TGGCCATAAACTGCCTAAGCACTCAGGCCTCCCACT...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACCCCTGGAGGGAGGTGTaGGTTCCTTTTTGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHPWREV*VPFWLP
Trigger: AGGCAACCAAAAAGGAACCCACACCTCCCTCCAGGG...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000545251.6
CDS-3UTR CCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCCTTCTTGTTCTTCTCTaGCTGCTGGCCCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVALLVLL*LLAPLA
Trigger: GGCAAGAGGGGCCAGCAGCCAGAGAAGAACAAGAAG...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GCTATTGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCCCATCTGGAGAAGCTTaGGTTGAGCAGAGATCCAGA +
Preference number: 4 (lower is better)
Translates to: AIGHIAAKTVSKNCPRGPPSGEA*VEQRSR
Trigger: TCTGGATCTCTGCTCAACCCAAGCTTCTCCAGATGG...GGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CCA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGGGCCTAAAGTACACCTaGAGGGCAGGTGAGTACCAA +
Preference number: 4 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRGLKYT*RAGEYQ
Trigger: TTGGTACTCACCTGCCCTCCAGGTGTACTTTAGGCC...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGTCCCCATGGGTTGCCAGTaGCAGTTCAGGGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: GLNYDSQGHLLENPGARVPMGCQ*QFRDRG
Trigger: GCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGG...GACCCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CAA 72 bp AGAGAACCAGAGTGCTTCTTTCTCTGGTCAAAGGGGTaGATGAGTGGGAGGCCTGAGTGCTTAGGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: REPECFFLWSKG*MSGRPECLGSL
Trigger: TAAACTGCCTAAGCACTCAGGCCTCCCACTCATCAACCCCTTTGACCAGAGAAAGAAGCACTCTGGTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp ATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTAGTAAACAATCGCTaGACACCCGCCCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: MSSTSLGLVQADGKSFCYVVNNR*TPALCI
Trigger: AATGCACAGGGCGGGTGTTCAGCGATTGTTTACTAC...ATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GCTATTGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCCACGTACCTGCTACCTaGATTTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: AIGHIAAKTVSKNCPRGPHVPAT*ICVCVC
Trigger: ACACACACACACACAAATTCAGGTAGCAGGTACGTG...GGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR TCA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGCAGTGTTGCCTTCTGTaGGACTGCACTGATGATTGT +
Preference number: 4 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMQCCLL*DCTDDC
Trigger: ACAATCATCAGTGCAGTCTCACAGAAGGCAACACTG...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp ATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTGCTGTCTTTATGGCCATATAGGGTaGGAGGGCAAATGTGACTGG +
Preference number: 4 (lower is better)
Translates to: IVPGDRGLVMAMTTDCCLYGHIG*EGKCDW
Trigger: CCAGTCACATTTGCCCTCTCACCCTATATGGCCATA...AAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GAGCTTTCAATGAATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGTCCCGGATCCCGGTaGTCCGCCCTCCTAGATCAT +
Preference number: 4 (lower is better)
Translates to: ELSMNFEPSHFKHLGTGEGPGSR*SALLDH
Trigger: ATGATCTAGGAGGGCGGATCACCGGGATCCGGGACC...CTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCGGCTGTGGAAGTGACTaGGAAGTGAGTTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVAGCGSD*EVSFWV
Trigger: CACCCAGAAACTCACTTCTCAGTCACTTCCACAGCC...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACTGGGTTTGGCTCTTCTaGGTCATCGGCTGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHWVWLF*VIGCGS
Trigger: ACTTCCACAGCCGATGACTCAGAAGAGCCAAACCCA...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CCTCTCAGTGGCAATGAGGACGGACTTTGTCATGAGTTACAAGAAAAGAGCTTTTGTAGCTGGCACCTTTaGGGGAGTCTGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PLSGNEDGLCHELQEKSFCSWHL*GSLVSK
Trigger: CTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACA...AAAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCCTCATTGCCACTGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp TTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTTGTAGCTGGCACCTTTaGGGGAGTCTGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: FLAVTTKSSLFLLGERHFCSWHL*GSLVSK
Trigger: CTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACA...AAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACGATCTCGGCCAGAACTaGTTTCCTGGAGGTCACGTT +
Preference number: 4 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHDLGQN*FPGGHV
Trigger: AACGTGACCTCCAGGAAAGCAGTTCTGGCCGAGATC...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp CCTCTCAGTGGCAATGAGGACGGACTTTGTCATGAGTTACAAGAAAAGAGCTTTTTGTTCTTCTCTGGCTaGTGGCCCCTCTTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PLSGNEDGLCHELQEKSFLFFSG*WPLLPG
Trigger: ACCAGGCAAGAGGGGCCAGCAGCCAGAGAAGAACAA...AAAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCCTCATTGCCACTGAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp GCTATTGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCAACACCTCTGCTTCCTaGCTAACTAAACAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: AIGHIAAKTVSKNCPRGPNTSAS*LTKQAV
Trigger: CACTGCCTGTTTAGTTAGGCAGGAAGCAGAGGTGTT...GGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR GCA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCTATTGGACACATAGCTaGCAAGACAGTATCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPYWTHS*QDSIQE
Trigger: TTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATA...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCAGGCATGCCTGGGTCTaGAGTAAGGAGCATTGCTAT +
Preference number: 4 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVRHAWV*SKEHCY
Trigger: ATAGCAATGCTCCTTACTGCAGACCCAGGCATGCCT...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCCATACACACAGTTTTTaGCCTAGTGGCTACTATAGA +
Preference number: 4 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPHTHSF*PSGYYR
Trigger: TCTATAGTAGCCACTAGGGCAAAAACTGTGTGTATG...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGGGAACAATCTGCCGCTaGCGCCGAGGGCAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKGTICR*RRGQRP
Trigger: AGGGCGCTGCCCTCGGCGGCAGCGGCAGATTGTTCC...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444639.5
CDS-3UTR CCA 90 bp CCTTGCTGGTTAGGAAATTGTATATATGTGTCTGAATCTGGCAAGGCTTTCCCAAATGGCCAGCCAGCTTaGGGAGCCTCCTTCCACGTT +
Preference number: 4 (lower is better)
Translates to: PCWLGNCIYVSESGKAFPNGQPA*GASFHV
Trigger: AACGTGGAAGGAGGCTCCCCAAGCTGGCTGGCCATT...TGGGAAAGCCTTGCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CCA 90 bp CTCCTTTCATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTGCACACAGCAGCAAAATaGCCAGCCAGCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLSCTCLFNKTFRAYPALHTAAK*PASLGS
Trigger: GCTCCCCAAGCTGGCTGGCCATTTTGCTGCTGTGTG...CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGTTTGGGCATGCCACTaGCAGCACCTCCACACACAG +
Preference number: 4 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSVWACH*QHLHTQ
Trigger: CTGTGTGTGGAGGTGCTGCCAGTGGCATGCCCAAAC...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGCTTACAAGCAGGTCCTaGGCTCAAAAGGATGCAACC +
Preference number: 4 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRLTSRS*AQKDAT
Trigger: GGTTGCATCCTTTTGAGCCCAGGACCTGCTTGTAAG...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGTGCCTTCTTGGTGTTTaGTCAAGATGGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMCLLGV*SRWCPR
Trigger: TCTGGGACACCATCTTGACCAAACACCAAGAAGGCA...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GAGCTTTCAATGAATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGCCCCTCTTGCCTGGTaGGCTCCAGCAGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: ELSMNFEPSHFKHLGTGEAPLAW*APAAMA
Trigger: TGCCATTGCTGCTGGAGCCCACCAGGCAAGAGGGGC...CTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp AGCAGAATATACTTGCCCACGTACCTGCTACCTGAATTTGTGTGTGTGTGTGTTCTTCTTGTTCTTCTCTaGCTGCTGGCCCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: SRIYLPTYLLPEFVCVCVLLVLL*LLAPLA
Trigger: GGCAAGAGGGGCCAGCAGCCAGAGAAGAACAAGAAG...AACACACACACACACAAATTCAGGTAGCAGGTACGTGGGCAAGTATATTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CCA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGCAAGAATTGTCCACGTaGTCCCTGGGACTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSQELST*SLGLPS
Trigger: GGAGGGCAGTCCCAGGGACCACGTGGACAATTCTTG...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATGGTGGGAGGCATGCCTaGGTCTGCAGTAAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHGGRHA*VCSKEH
Trigger: ATGCTCCTTACTGCAGACCCAGGCATGCCTCCCACC...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGGTGGGAGGCATGCCTaGGTCTGCAGTAAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSGGRHA*VCSKEH
Trigger: ATGCTCCTTACTGCAGACCCAGGCATGCCTCCCACC...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATTTCCCAACCTCACTCTaGCGGGGAAAGCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHFPTSL*RGKPSS
Trigger: TGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAA...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp TTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCTTTGGTGCAGGCAGATaGCAAGTCATTCTGTTATGT +
Preference number: 4 (lower is better)
Translates to: LVQADGKSFCYVKGTARGFGAGR*QVILLC
Trigger: ACATAACAGAATGACTTGCCATCTGCCTGCACCAAA...GCCTCTGGCTGTGCCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGGGAGAACCATGTTACTTGTATaGTCCCGGATCCCGGTGATC +
Preference number: 4 (lower is better)
Translates to: HPLQQLVGSLRREDHSGRTMLLV*SRIPVI
Trigger: GATCACCGGGATCCGGGACCATACAAGTAACATGGT...TCTCCCCGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp ATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTGCTGTCTTACCATGTTACTTGTATaGTCCCGGATCCCGGTGATC +
Preference number: 4 (lower is better)
Translates to: IVPGDRGLVMAMTTDCCLTMLLV*SRIPVI
Trigger: GATCACCGGGATCCGGGACCATACAAGTAACATGGT...AAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGGGAGATGGGTGTTTCATCCCTaGGGTGAGAGCAAGTCCATT +
Preference number: 4 (lower is better)
Translates to: HPLQQLVGSLRREDHSGRWVFHP*GESKSI
Trigger: AATGGACTTGCTCTCACCCCAGGGATGAAACACCCA...TCTCCCCGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCTGGGTGTTTCATCCCTaGGGTGAGAGCAAGTCCATT +
Preference number: 4 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVWVFHP*GESKSI
Trigger: AATGGACTTGCTCTCACCCCAGGGATGAAACACCCA...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGCTGCCGTCCGGAGCCTaGCTAAAGCTGCTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSLPSGA*LKLLRS
Trigger: ACTTCTGAGCAGCTTTAGCCAGGCTCCGGACGGCAG...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCGTGACCAGGGAGGGCTaGGACATTTGTGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVAVTREG*DICVTE
Trigger: TTCTGTGACACAAATGTCCCAGCCCTCCCTGGTCAC...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CTGTTAGAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCAAAGTACATAGCCAATaGCCATTTGATGAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: LLENPGARVTTKCPPSTGKVHSQ*PFDEQN
Trigger: ATTCTGCTCATCAAATGGTCATTGGCTATGTACTTT...GCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTCTAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATTTGTATATATGTGTCTaGATCTGGCAAGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDLYICV*IWQGFP
Trigger: GGGAAAGCCTTGCCAGATTCAGACACATATATACAA...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp AGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATGACTCTACCATGGTTGTATATATGTGTCTaGATCTGGCAAGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SKGETATFLILRPMTLPWLYICV*IWQGFP
Trigger: GGGAAAGCCTTGCCAGATTCAGACACATATATACAA...CCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATGGACGGACTTTGTCATaGGTTACAAGAAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDGRTLS*VTRKEL
Trigger: AAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCC...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GCTATTGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCCACATCACAACCTTATaGCATCACTTCCAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: AIGHIAAKTVSKNCPRGPHITTL*HHFQCC
Trigger: GCAACACTGGAAGTGATGTCATAAGGTTGTGATGTG...GGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR TCA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCTGCAGGTTTAAATTATaGTTCACAGGGTCATCTGTT +
Preference number: 4 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPCRFKL*FTGSSV
Trigger: AACAGATGACCCTGTGAATCATAATTTAAACCTGCA...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGGGAGACTCCTAGATCATATCTaGCACTACGTCTCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: HPLQQLVGSLRREDHSGRLLDHI*HYVSAV
Trigger: GACAGCTGAGACGTAGTGTCAGATATGATCTAGGAG...TCTCCCCGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTGGTCCCGGATCCCGGTaGTCCGCCCTCCTAGATCAT +
Preference number: 4 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCGPGSR*SALLDH
Trigger: ATGATCTAGGAGGGCGGATCACCGGGATCCGGGACC...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGGGAGAGCCTTGTCATGGCAATaGCAACTGACTGCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: HPLQQLVGSLRREDHSGRALSWQ*QLTAVL
Trigger: TAAGACAGCAGTCAGTTGTCATTGCCATGACAAGGC...TCTCCCCGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTCATCGGCTGTGGAAGTaGCTGAGAAGTGAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: FAEWFAGVMFHREVLDHIHRLWK*LRSEFL
Trigger: CAGAAACTCACTTCTCAGTCACTTCCACAGCCGATG...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GCTATTGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCAAACATGGAATCCATTaGGCAATGGGGAAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: AIGHIAAKTVSKNCPRGPKHGIH*AMGKGA
Trigger: TGCTCCTTTCCCCATTGCTCAATGGATTCCATGTTT...GGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR TCA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCAAGAGAGTAACCATCTaGCTACATCAAGACTTTTCA +
Preference number: 4 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPKRVTI*LHQDFS
Trigger: TGAAAAGTCTTGATGTAGTCAGATGGTTACTCTCTT...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp AGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATGACTCTACCATGGTTTCTGAGTGATGTCTaGGTGGGGGTAATACCTAAT +
Preference number: 4 (lower is better)
Translates to: SKGETATFLILRPMTLPWFLSDV*VGVIPN
Trigger: ATTAGGTATTACCCCCACTCAGACATCACTCAGAAA...CCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCCGTTACTTCTTGCTTTaGGTTGTCAGGGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVARYFLL*VVRGSR
Trigger: CCGAGATCCCCTGACAACGCAAAGCAAGAAGTAACG...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCAACACCTCTGCTTCCTaGCTAACTAAACAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVNTSAS*LTKQAV
Trigger: CACTGCCTGTTTAGTTAGGCAGGAAGCAGAGGTGTT...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp CCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGGTTTGCGGTGTGTTACGTGCATGTaGACACACTTGGGAACCATA +
Preference number: 4 (lower is better)
Translates to: PRALCSCLEKGTLLSGLRCVTCM*THLGTI
Trigger: TATGGTTCCCAAGTGTGTGCACATGCACGTAACACA...CCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCACCTGTGCCATACCGTaGACACATCACAACCTTATG +
Preference number: 4 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVTCAIP*THHNLM
Trigger: CATAAGGTTGTGATGTGTGCACGGTATGGCACAGGT...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp GCTATTGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCTGTGTCACCTACATGTaGTCTCCAGCATTAAACACC +
Preference number: 4 (lower is better)
Translates to: AIGHIAAKTVSKNCPRGPCVTYM*SPALNT
Trigger: GGTGTTTAATGCTGGAGAGCACATGTAGGTGACACA...GGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR GCA 90 bp CACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGGATAGAGAACCAGAGTaGTTCTTTCTCTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: HIPGFGAGRWQVILLCEGDREPE*FFLWSK
Trigger: CTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATC...CCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GGGAGATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGCAATGACAACTGACTaGTGTCTTAATTCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: GRCLPHPWVWCRQMASHSAMTTD*CLNSKE
Trigger: CTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGC...AGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp TTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTACAGCAGGGACATTGTaGCTGGAGATAGAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: FLAVTTKSSLFLLGERHFTAGTL*LEIEAL
Trigger: CAAGGCCTCTATCTCCAGGCACAATGTCCCTGCTGT...AAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGCTGGGGCTGGTCTGGTaGAGGCAGAAGAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVLGLVW*RQKRES
Trigger: TGATTCCCTCTTCTGCCTGCACCAGACCAGCCCCAG...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGCCCTGGAGGGAGGTGTaGGTTCCTTTTTGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: AGLNYDSQGHLLENPGARPWREV*VPFWLP
Trigger: AGGCAACCAAAAAGGAACCCACACCTCCCTCCAGGG...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423313.6
CDS-3UTR CCA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGTTCCAGCTTTGGGTTTaGGCATGCCACTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSFQLWV*ACHWQH
Trigger: GTGCTGCCAGTGGCATGCCCAAACCCAAAGCTGGAA...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGTTCCAGCTTTGGGTTTaGGCATGCCACTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: AGLNYDSQGHLLENPGARFQLWV*ACHWQH
Trigger: GTGCTGCCAGTGGCATGCCCAAACCCAAAGCTGGAA...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTGGGCTTCCATAATTTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTTTCCTCTTCCAGCTTTaGGTTTGGGCATGCCACTGG +
Preference number: 4 (lower is better)
Translates to: VGFHNFLAVTTKSSLFLLFLFQL*VWACHW
Trigger: CCAGTGGCATGCCCAAACCCAAAGCTGGAAGAGGAA...AAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAAATTATGGAAGCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCCTTACAAGCAGGTCCTaGGCTCAAAAGGATGCAACC +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVALTSRS*AQKDAT
Trigger: GGTTGCATCCTTTTGAGCCCAGGACCTGCTTGTAAG...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTATGGATAAATGTTCTTTGTGCTTTGCATGTGGGGTATGCCAGAGACAGGTGGGGACTCCCAGGCAGATaGTGTTGTAGATGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: VWINVLCALHVGYARDRWGLPGR*CCRCLL
Trigger: AAGAAGGCATCTACAACACCATCTGCCTGGGAGTCC...CCACCTGTCTCTGGCATACCCCACATGCAAAGCACAAAGAACATTTATCCATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CCA 90 bp AGCAGAATATACTTGCCCACGTACCTGCTACCTGAATTTGTGTGTGTGTGTGTTGGGCTCCAGCAGCAATaGCAACAGATGAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SRIYLPTYLLPEFVCVCVGLQQQ*QQMKRS
Trigger: ACTCCTCTTCATCTGTTGCCATTGCTGCTGGAGCCC...AACACACACACACACAAATTCAGGTAGCAGGTACGTGGGCAAGTATATTCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCCCATCTGGAGAAGCTTaGGTTGAGCAGAGATCCAGA +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVAPSGEA*VEQRSR
Trigger: TCTGGATCTCTGCTCAACCCAAGCTTCTCCAGATGG...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACGGAATAGATGGTGTATaGGGGCCTTGCTGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHGIDGV*GPCWLG
Trigger: TCCTAACCAGCAAGGCCCCCATACACCATCTATTCC...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATAGAGGCACAGAAACTTaGTGTGTCTGTATCAAGACA +
Preference number: 4 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDRGTET*CVCIKT
Trigger: TGTCTTGATACAGACACACCAAGTTTCTGTGCCTCT...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTACTTCCCTGCACAAAGTACATAGCCAATGACCATTTGATGAGCAGAATATACTTCCCAACCTCACTCTaGCGGGGAAAGCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VLPCTKYIANDHLMSRIYFPTSL*RGKPSS
Trigger: TGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAA...GTATATTCTGCTCATCAAATGGTCATTGGCTATGTACTTTGTGCAGGGAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CCA 90 bp ATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATTGCTTAGGCAGTTTATaGCCATATAGGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: MSSTSLGLVQADGKSFCYCLGSL*PYRVRG
Trigger: CCCTCTCACCCTATATGGCCATAAACTGCCTAAGCA...ATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATTTTGGTGCAGGCAGATaGCAAGTCATTCTGTTATGT +
Preference number: 4 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDFGAGR*QVILLC
Trigger: ACATAACAGAATGACTTGCCATCTGCCTGCACCAAA...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CCTCTCAGTGGCAATGAGGACGGACTTTGTCATGAGTTACAAGAAAAGAGCTTTGAGCAGTGGCAGTTGTaGGGAGATGTCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: PLSGNEDGLCHELQEKSFEQWQL*GDVFHI
Trigger: GATGTGGAAGACATCTCCCCACAACTGCCACTGCTC...AAAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCCTCATTGCCACTGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATTGTCCTGGTGAGCAGTaGCAGTTGTGGGGAGATGTC +
Preference number: 4 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHCPGEQ*QLWGDV
Trigger: GACATCTCCCCACAACTGCCACTGCTCACCAGGACA...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCTTTTTCTTGGAAAGGTaGCTGCCATTTTTCTACCTT +
Preference number: 4 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPFFLER*LPFFYL
Trigger: AAGGTAGAAAAATGGCAGCCACCTTTCCAAGAAAAA...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCACCTTTGAGGGAGTCTaGTCTCCAAGGCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVATFEGV*SPRPSV
Trigger: AACAGATGGCCTTGGAGACCAGACTCCCTCAAAGGT...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGGTCACTCAGCTGCTTTaGGTCTCAGTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRVTQLL*VSVSSS
Trigger: AGATGAAGAAACTGAGACTCAAAGCAGCTGAGTGAC...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR TCA 90 bp TTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGTAGTAAACAATCGCTaGACACCCGCCCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: FLAVTTKSSLFLLGERHFVVNNR*TPALCI
Trigger: AATGCACAGGGCGGGTGTTCAGCGATTGTTTACTAC...AAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp GGGAGATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTAAAGTACATAGCCAATaGCCATTTGATGAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GRCLPHPWVWCRQMASHSKVHSQ*PFDEQN
Trigger: ATTCTGCTCATCAAATGGTCATTGGCTATGTACTTT...AGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGTTGTATATATGTGTCTaGATCTGGCAAGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMLYICV*IWQGFP
Trigger: GGGAAAGCCTTGCCAGATTCAGACACATATATACAA...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGACATCTTGGCACAGGTaGGGGGTCAGAGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVTSWHR*GVRGTE
Trigger: TTCTGTGCCTCTGACCCCTCACCTGTGCCAAGATGT...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGCTCGGGGAGAACTGGTaGGGTATTACAAGCTTACCC +
Preference number: 4 (lower is better)
Translates to: AGLNYDSQGHLLENPGARLGENW*GITSLP
Trigger: GGGTAAGCTTGTAATACCTCACCAGTTCTCCCCGAG...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp TTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCTGCAGGTTTAAATTATaGTTCACAGGGTCATCTGTT +
Preference number: 4 (lower is better)
Translates to: LVQADGKSFCYVKGTARGCRFKL*FTGSSV
Trigger: AACAGATGACCCTGTGAATCATAATTTAAACCTGCA...GCCTCTGGCTGTGCCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGAGTCATTCTGTTATGTaGAGGGCACAGCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: AGLNYDSQGHLLENPGARSHSVM*RAQPEA
Trigger: GGCCTCTGGCTGTGCCCTTCACATAACAGAATGACT...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATGGCTGTGGAAGTGACTaGGAAGTGAGTTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHGCGSD*EVSFWV
Trigger: CACCCAGAAACTCACTTCTCAGTCACTTCCACAGCC...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGTGGGTTTGGCTCTTCTaGGTCATCGGCTGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: AGLNYDSQGHLLENPGARWVWLF*VIGCGS
Trigger: ACTTCCACAGCCGATGACTCAGAAGAGCCAAACCCA...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp ATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATAAACATGGAATCCATTaGGCAATGGGGAAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: MSSTSLGLVQADGKSFCYKHGIH*AMGKGA
Trigger: TGCTCCTTTCCCCATTGCTCAATGGATTCCATGTTT...ATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGTCATCCTCAGACCTATaGCTCTACCATGGCGAAGGC +
Preference number: 4 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSSSSDL*LYHGEG
Trigger: GCCTTCGCCATGGTAGAGTCATAGGTCTGAGGATGA...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCTTTTGCAAGCAAGGGTaGGACAGCCACATTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVAFCKQG*DSHIPH
Trigger: ATGAGGAATGTGGCTGTCTCACCCTTGCTTGCAAAA...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGGTTTGCGGCCTTTAAGAAGCCATTaGTGGACCTCATTGATGGAA +
Preference number: 4 (lower is better)
Translates to: PRALCSCLEKGTLLSGLRPLRSH*WTSLME
Trigger: TTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGG...CCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACAGATGGTGTTGTAGATaGCTTCTTGGTGTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDRWCCR*LLGVWS
Trigger: TGACCAAACACCAAGAAGGCATCTACAACACCATCT...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp AACACCCAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATTTGTTCTTCTCTGGCTaGTGGCCCCTCTTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: NTQFHPLQQLVGSLRREDLFFSG*WPLLPG
Trigger: ACCAGGCAAGAGGGGCCAGCAGCCAGAGAAGAACAA...ATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp ATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATTGTGTTACGTGCATGTaGACACACTTGGGAACCATA +
Preference number: 4 (lower is better)
Translates to: MSSTSLGLVQADGKSFCYCVTCM*THLGTI
Trigger: TATGGTTCCCAAGTGTGTGCACATGCACGTAACACA...ATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACACTTGCCCACGTACCTaGTACCTGAATTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHTCPRT*YLNLCV
Trigger: CACACACAAATTCAGGTAGCAGGTACGTGGGCAAGT...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCTGTGTCACCTACATGTaGTCTCCAGCATTAAACACC +
Preference number: 4 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVCVTYM*SPALNT
Trigger: GGTGTTTAATGCTGGAGAGCACATGTAGGTGACACA...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATACAGCAGGGACATTGTaGCTGGAGATAGAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHTAGTL*LEIEAL
Trigger: CAAGGCCTCTATCTCCAGGCACAATGTCCCTGCTGT...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp CCAGAGTGCTTCTTTCTCTGGTCAAAGGGGTTGATGAGTGGGAGGCCTGAGTGCCTTAGGCTCCTTTCATaGACCTGTTTATTTAACAAA +
Preference number: 4 (lower is better)
Translates to: PECFFLWSKGLMSGRPECLRLLS*TCLFNK
Trigger: TTTGTTAAATAAACAGGTGCATGAAAGGAGCCTAAG...GCACTCAGGCCTCCCACTCATCAACCCCTTTGACCAGAGAAAGAAGCACTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATTTCCTCTTCCAGCTTTaGGTTTGGGCATGCCACTGG +
Preference number: 4 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHFLFQL*VWACHW
Trigger: CCAGTGGCATGCCCAAACCCAAAGCTGGAAGAGGAA...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCTGCCTTCTTGGTGTTTaGTCAAGATGGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVACLLGV*SRWCPR
Trigger: TCTGGGACACCATCTTGACCAAACACCAAGAAGGCA...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGCTGGCCCCTCTTGCCTaGTGGGCTCCAGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKLAPLA*WAPAAM
Trigger: CATTGCTGCTGGAGCCCACCAGGCAAGAGGGGCCAG...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp GAGCTTTCAATGAATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGTGGGAGGCATGCCTaGGTCTGCAGTAAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: ELSMNFEPSHFKHLGTGEGGRHA*VCSKEH
Trigger: ATGCTCCTTACTGCAGACCCAGGCATGCCTCCCACC...CTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATGTATGGGGGCCTTGCTaGTTAGGAAATTGTATATAT +
Preference number: 4 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDVWGPC*LGNCIY
Trigger: ATATATACAATTTCCTAACCAGCAAGGCCCCCATAC...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACAGGCACTTTGCTGAGTaGTTTGCGGGGGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHRHFAE*FAGVMF
Trigger: AAACATTACCCCCGCAAACCACTCAGCAAAGTGCCT...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp GTACTTCCCTGCACAAAGTACATAGCCAATGACCATTTGATGAGCAGAATATACTGTGCATTCAGATCCTaGTCACCGCCCAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: VLPCTKYIANDHLMSRIYCAFRS*SPPSSV
Trigger: CACTGAACTGGGCGGTGATCAGGATCTGAATGCACA...GTATATTCTGCTCATCAAATGGTCATTGGCTATGTACTTTGTGCAGGGAAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR TCA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGTAGTAAACAATCGCTaGACACCCGCCCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: AGLNYDSQGHLLENPGARVVNNR*TPALCI
Trigger: AATGCACAGGGCGGGTGTTCAGCGATTGTTTACTAC...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATAAAAGGATGCAACCTTaGCCACTTGTAATTTATTCC +
Preference number: 4 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDKRMQP*PLVIYS
Trigger: GGAATAAATTACAAGTGGTCAAGGTTGCATCCTTTT...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp TTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTCACGTACCTGCTACCTaGATTTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: FLAVTTKSSLFLLGERHFHVPAT*ICVCVC
Trigger: ACACACACACACACAAATTCAGGTAGCAGGTACGTG...AAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACCATGCATCTGTAACCTaGGTGGTTTATGGAATAGAT +
Preference number: 4 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDHASVT*VVYGID
Trigger: ATCTATTCCATAAACCACTCAGGTTACAGATGCATG...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGCATGCATCTGTAACCTaGGTGGTTTATGGAATAGAT +
Preference number: 4 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMHASVT*VVYGID
Trigger: ATCTATTCCATAAACCACTCAGGTTACAGATGCATG...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTACATCTTGGCACAGGTaGGGGGTCAGAGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPTSWHR*GVRGTE
Trigger: TTCTGTGCCTCTGACCCCTCACCTGTGCCAAGATGT...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp AACACCCAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCTCGGGGAGAACTGGTaGGGTATTACAAGCTTACCC +
Preference number: 4 (lower is better)
Translates to: NTQFHPLQQLVGSLRREDLGENW*GITSLP
Trigger: GGGTAAGCTTGTAATACCTCACCAGTTCTCCCCGAG...ATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp GTATGGATAAATGTTCTTTGTGCTTTGCATGTGGGGTATGCCAGAGACAGGTGGGACAAACTCTCTATGTaGCAAGGGGATAGAGAACCA +
Preference number: 4 (lower is better)
Translates to: VWINVLCALHVGYARDRWDKLSM*QGDREP
Trigger: TGGTTCTCTATCCCCTTGTCACATAGAGAGTTTGTC...CCACCTGTCTCTGGCATACCCCACATGCAAAGCACAAAGAACATTTATCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR TCA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTCTTACCCTCCCCAGATaGGTCAAGCAGTCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPLTLPR*VKQSLV
Trigger: GACCAGAGACTGCTTGACTCATCTGGGGAGGGTAAG...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp AGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATGACTCTACCATGGAAGAGAGTAACCATCTaGCTACATCAAGACTTTTCA +
Preference number: 4 (lower is better)
Translates to: SKGETATFLILRPMTLPWKRVTI*LHQDFS
Trigger: TGAAAAGTCTTGATGTAGTCAGATGGTTACTCTCTT...CCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGGGAGATTTCTGAGTGATGTCTaGGTGGGGGTAATACCTAAT +
Preference number: 4 (lower is better)
Translates to: HPLQQLVGSLRREDHSGRFLSDV*VGVIPN
Trigger: ATTAGGTATTACCCCCACTCAGACATCACTCAGAAA...TCTCCCCGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCTTTCTGAGTGATGTCTaGGTGGGGGTAATACCTAAT +
Preference number: 4 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVFLSDV*VGVIPN
Trigger: ATTAGGTATTACCCCCACTCAGACATCACTCAGAAA...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CCTCTCAGTGGCAATGAGGACGGACTTTGTCATGAGTTACAAGAAAAGAGCTTTTTTTGCAAGCAAGGGTaGGACAGCCACATTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PLSGNEDGLCHELQEKSFFCKQG*DSHIPH
Trigger: ATGAGGAATGTGGCTGTCTCACCCTTGCTTGCAAAA...AAAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCCTCATTGCCACTGAGAGG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGGGAGACCTTTAAGAAGCCATTaGTGGACCTCATTGATGGAA +
Preference number: 4 (lower is better)
Translates to: HPLQQLVGSLRREDHSGRPLRSH*WTSLME
Trigger: TTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGG...TCTCCCCGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp ATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATCCTTTAAGAAGCCATTaGTGGACCTCATTGATGGAA +
Preference number: 4 (lower is better)
Translates to: MSSTSLGLVQADGKSFCYPLRSH*WTSLME
Trigger: TTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGG...ATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCTTCCACGTTACTTCTTaGTTTGCGTTGTCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVAFHVTS*FALSGD
Trigger: ATCCCCTGACAACGCAAAGCAAGAAGTAACGTGGAA...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp CCTCTCAGTGGCAATGAGGACGGACTTTGTCATGAGTTACAAGAAAAGAGCTTTAACACCTCTGCTTCCTaGCTAACTAAACAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PLSGNEDGLCHELQEKSFNTSAS*LTKQAV
Trigger: CACTGCCTGTTTAGTTAGGCAGGAAGCAGAGGTGTT...AAAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCCTCATTGCCACTGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp GCTATTGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCTATTGGACACATAGCTaGCAAGACAGTATCCAAGAA +
Preference number: 4 (lower is better)
Translates to: AIGHIAAKTVSKNCPRGPYWTHS*QDSIQE
Trigger: TTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATA...GGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR GCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCATGTTCTTTGTGCTTTaGATGTGGGGTATGCCAGAG +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVAMFFVL*MWGMPE
Trigger: CTCTGGCATACCCCACATGCAAAGCACAAAGAACAT...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTATGTTCTTTGTGCTTTaGATGTGGGGTATGCCAGAG +
Preference number: 4 (lower is better)
Translates to: FAEWFAGVMFHREVLDHIMFFVL*MWGMPE
Trigger: CTCTGGCATACCCCACATGCAAAGCACAAAGAACAT...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTGGTGTATGGGGGCCTTaGTGGTTAGGAAATTGTATA +
Preference number: 4 (lower is better)
Translates to: FAEWFAGVMFHREVLDHIGVWGP*WLGNCI
Trigger: TATACAATTTCCTAACCAGCAAGGCCCCCATACACC...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGTCTGCATCCCACCTGTaGCATACCGTGCACACATCA +
Preference number: 4 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVSASHL*HTVHTS
Trigger: TGATGTGTGCACGGTATGGCACAGGTGGGATGCAGA...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCAAAGGAGCAAGCAGTTaGCATGGAAACCATGTTACT +
Preference number: 4 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVKGASS*HGNHVT
Trigger: AGTAACATGGTTTCCATGGCAACTGCTTGCTCCTTT...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp ATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATAAAGGAGCAAGCAGTTaGCATGGAAACCATGTTACT +
Preference number: 4 (lower is better)
Translates to: MSSTSLGLVQADGKSFCYKGASS*HGNHVT
Trigger: AGTAACATGGTTTCCATGGCAACTGCTTGCTCCTTT...ATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp ATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTGCTGTCTTTCTTGGAAAGGTGGCTaGCATTTTTCTACCTTTCTC +
Preference number: 4 (lower is better)
Translates to: IVPGDRGLVMAMTTDCCLSWKGG*HFSTFL
Trigger: GAGAAAGGTAGAAAAATGGCAGCCACCTTTCCAAGA...AAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGGCCCAGGGAATCTCCTaGTTGCTGCCCCGTCTGACA +
Preference number: 4 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKAQGIS*LLPRLT
Trigger: TGTCAGACGGGGCAGCAACCAGGAGATTCCCTGGGC...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000545251.6
CDS-3UTR CCA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGCTTACAAGCAGGTCCTaGGCTCAAAAGGATGCAACC +
Preference number: 4 (lower is better)
Translates to: AGLNYDSQGHLLENPGARLTSRS*AQKDAT
Trigger: GGTTGCATCCTTTTGAGCCCAGGACCTGCTTGTAAG...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CCTTGCTGGTTAGGAAATTGTATATATGTGTCTGAATCTGGCAAGGCTTTCCCAGGACTCCCAGGCAGATaGTGTTGTAGATGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: PCWLGNCIYVSESGKAFPGLPGR*CCRCLL
Trigger: AAGAAGGCATCTACAACACCATCTGCCTGGGAGTCC...TGGGAAAGCCTTGCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CCA 90 bp GGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGTCGGACTCCCAGGCAGATaGTGTTGTAGATGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GLNYDSQGHLLENPGARVGLPGR*CCRCLL
Trigger: AAGAAGGCATCTACAACACCATCTGCCTGGGAGTCC...GACCCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTCAAGAATTGTCCACGTaGTCCCTGGGACTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCQELST*SLGLPS
Trigger: GGAGGGCAGTCCCAGGGACCACGTGGACAATTCTTG...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp AGGTATTACAAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTGGTGGGAGGCATGCCTaGGTCTGCAGTAAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: RYYKLTLNNITYPTVTTVGGRHA*VCSKEH
Trigger: ATGCTCCTTACTGCAGACCCAGGCATGCCTCCCACC...AACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTTGTAATACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp TTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGGTTTATGGAATAGATaGTGTATGGGGGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: FLAVTTKSSLFLLGERHFGLWNR*CMGALL
Trigger: CAGCAAGGCCCCCATACACCATCTATTCCATAAACC...AAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp ATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTGCTGTCTTAACCTGAGTGGTTTATaGAATAGATGGTGTATGGGG +
Preference number: 4 (lower is better)
Translates to: IVPGDRGLVMAMTTDCCLNLSGL*NRWCMG
Trigger: CCCCATACACCATCTATTCCATAAACCACTCAGGTT...AAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GCTATTGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCCCCTGCTGGAAACTTTaGTTATATAGGAGATACCTA +
Preference number: 4 (lower is better)
Translates to: AIGHIAAKTVSKNCPRGPPCWKL*LYRRYL
Trigger: TAGGTATCTCCTATATAACCAAAGTTTCCAGCAGGG...GGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATAGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CCA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACCCCTGCTGGAAACTTTaGTTATATAGGAGATACCTA +
Preference number: 4 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDPCWKL*LYRRYL
Trigger: TAGGTATCTCCTATATAACCAAAGTTTCCAGCAGGG...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATAGTTCATCCTATAAGTaGATTAACTCTGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDSSSYK*INSASQ
Trigger: TTGGGAAGCAGAGTTAATCCACTTATAGGATGAACT...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGGGCCTAAAGTACACCTaGAGGGCAGGTGAGTACCAA +
Preference number: 4 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVGLKYT*RAGEYQ
Trigger: TTGGTACTCACCTGCCCTCCAGGTGTACTTTAGGCC...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CCTCTCAGTGGCAATGAGGACGGACTTTGTCATGAGTTACAAGAAAAGAGCTTTTGCTTAGGCAGTTTATaGCCATATAGGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PLSGNEDGLCHELQEKSFCLGSL*PYRVRG
Trigger: CCCTCTCACCCTATATGGCCATAAACTGCCTAAGCA...AAAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCCTCATTGCCACTGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATTGGGTGTTTCATCCCTaGGGTGAGAGCAAGTCCATT +
Preference number: 4 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHWVFHP*GESKSI
Trigger: AATGGACTTGCTCTCACCCCAGGGATGAAACACCCA...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGCCCATGGGTTGCCAGTaGCAGTTCAGGGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKPMGCQ*QFRDRG
Trigger: GCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGG...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp TGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCTGGGAGTCACATGTGGCTATTaGTACCATATTGAACCATAT +
Preference number: 4 (lower is better)
Translates to: WTHSCQDSIQELSTWSLGVTCGY*YHIEPY
Trigger: ATATGGTTCAATATGGTACCAATAGCCACATGTGAC...TCCCAGGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
3UTR CAA 72 bp CAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTaGCCATGGAAACCATGTTACTTGTATGGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: QLTAVLIQRSKQ*PWKPCYLYGPG
Trigger: TCCGGGACCATACAAGTAACATGGTTTCCATGGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp ATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTGCTGTCTTCATGCATCTGTAACCTaGGTGGTTTATGGAATAGAT +
Preference number: 4 (lower is better)
Translates to: IVPGDRGLVMAMTTDCCLHASVT*VVYGID
Trigger: ATCTATTCCATAAACCACTCAGGTTACAGATGCATG...AAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp AGGTATTACAAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTACATCTTGGCACAGGTaGGGGGTCAGAGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: RYYKLTLNNITYPTVTTVTSWHR*GVRGTE
Trigger: TTCTGTGCCTCTGACCCCTCACCTGTGCCAAGATGT...AACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTTGTAATACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGCAGTGTTGCCTTCTGTaGGACTGCACTGATGATTGT +
Preference number: 4 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSQCCLL*DCTDDC
Trigger: ACAATCATCAGTGCAGTCTCACAGAAGGCAACACTG...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGCAGTGTTGCCTTCTGTaGGACTGCACTGATGATTGT +
Preference number: 4 (lower is better)
Translates to: AGLNYDSQGHLLENPGARQCCLL*DCTDDC
Trigger: ACAATCATCAGTGCAGTCTCACAGAAGGCAACACTG...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGATGAGTGGGAGGCCTaGGTGCTTAGGCAGTTTATG +
Preference number: 4 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPDEWEA*VLRQFM
Trigger: CATAAACTGCCTAAGCACTCAGGCCTCCCACTCATC...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGCATCGGCTGTGGAAGTaGCTGAGAAGTGAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVHRLWK*LRSEFL
Trigger: CAGAAACTCACTTCTCAGTCACTTCCACAGCCGATG...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCTTGATCATTTCTGAGTaGTGTCTGAGTGGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVALIISE*CLSGGN
Trigger: ATTACCCCCACTCAGACATCACTCAGAAATGATCAA...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GTATGGATAAATGTTCTTTGTGCTTTGCATGTGGGGTATGCCAGAGACAGGTGGAGATGGTGTTGTAGATaGCTTCTTGGTGTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: VWINVLCALHVGYARDRWRWCCR*LLGVWS
Trigger: TGACCAAACACCAAGAAGGCATCTACAACACCATCT...CCACCTGTCTCTGGCATACCCCACATGCAAAGCACAAAGAACATTTATCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR GCA 90 bp CCTTGCTGGTTAGGAAATTGTATATATGTGTCTGAATCTGGCAAGGCTTTCCCAACTTGCCCACGTACCTaGTACCTGAATTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PCWLGNCIYVSESGKAFPTCPRT*YLNLCV
Trigger: CACACACAAATTCAGGTAGCAGGTACGTGGGCAAGT...TGGGAAAGCCTTGCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR GCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATACTTGCCCACGTACCTaGTACCTGAATTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHTCPRT*YLNLCV
Trigger: CACACACAAATTCAGGTAGCAGGTACGTGGGCAAGT...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCTCCATCTGTAAACATTaGACAGGTACACAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVASICKH*TGTQLQ
Trigger: CTGCAACTGTGTACCTGTGCAATGTTTACAGATGGA...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGTCACCTGTGCCATACCGTaGACACATCACAACCTTATG +
Preference number: 4 (lower is better)
Translates to: GLNYDSQGHLLENPGARVTCAIP*THHNLM
Trigger: CATAAGGTTGTGATGTGTGCACGGTATGGCACAGGT...GACCCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTAGTGGGAGGCCTGAGTaGTTAGGCAGTTTATGGCCA +
Preference number: 4 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPSGRPE*LGSLWP
Trigger: TGGCCATAAACTGCCTAAGCACTCAGGCCTCCCACT...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp TCTCTATGTGACAAGGGGATAGAGAACCAGAGTGCTTCTTTCTCTGGTCAAAGGGATAGAGAACCAGAGTaGTTCTTTCTCTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: SLCDKGIENQSASFSGQRDREPE*FFLWSK
Trigger: CTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATC...CCTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATCCCCTTGTCACATAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp AGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATGACTCTACCATGGCTTAGGCTCCTTTCATaGACCTGTTTATTTAACAAA +
Preference number: 4 (lower is better)
Translates to: SKGETATFLILRPMTLPWLRLLS*TCLFNK
Trigger: TTTGTTAAATAAACAGGTGCATGAAAGGAGCCTAAG...CCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCTCTTGGAAAGGTGGCTaGCATTTTTCTACCTTTCTC +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVASWKGG*HFSTFL
Trigger: GAGAAAGGTAGAAAAATGGCAGCCACCTTTCCAAGA...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GAGCTTTCAATGAATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGTTCCTCTTCCAGCTTTaGGTTTGGGCATGCCACTGG +
Preference number: 4 (lower is better)
Translates to: ELSMNFEPSHFKHLGTGEFLFQL*VWACHW
Trigger: CCAGTGGCATGCCCAAACCCAAAGCTGGAAGAGGAA...CTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp CTCCTTTCATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTGTGCCTTCTTGGTGTTTaGTCAAGATGGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LLSCTCLFNKTFRAYPALCLLGV*SRWCPR
Trigger: TCTGGGACACCATCTTGACCAAACACCAAGAAGGCA...CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCCTGAGGTTTGTTCCTTaGTTGAGTAGTTACTCTGTG +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVALRFVP*LSSYSV
Trigger: CACAGAGTAACTACTCAACCAAGGAACAAACCTCAG...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACCTGAGGTTTGTTCCTTaGTTGAGTAGTTACTCTGTG +
Preference number: 4 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHLRFVP*LSSYSV
Trigger: CACAGAGTAACTACTCAACCAAGGAACAAACCTCAG...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp CCTTGCTGGTTAGGAAATTGTATATATGTGTCTGAATCTGGCAAGGCTTTCCCAGGTTTATGGAATAGATaGTGTATGGGGGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PCWLGNCIYVSESGKAFPGLWNR*CMGALL
Trigger: CAGCAAGGCCCCCATACACCATCTATTCCATAAACC...TGGGAAAGCCTTGCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CCA 90 bp CTCCTTTCATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTGGGTTTATGGAATAGATaGTGTATGGGGGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LLSCTCLFNKTFRAYPALGLWNR*CMGALL
Trigger: CAGCAAGGCCCCCATACACCATCTATTCCATAAACC...CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp TCTCTATGTGACAAGGGGATAGAGAACCAGAGTGCTTCTTTCTCTGGTCAAAGGAACCTGAGTGGTTTATaGAATAGATGGTGTATGGGG +
Preference number: 4 (lower is better)
Translates to: SLCDKGIENQSASFSGQRNLSGL*NRWCMG
Trigger: CCCCATACACCATCTATTCCATAAACCACTCAGGTT...CCTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATCCCCTTGTCACATAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTAGAGGCACAGAAACTTaGTGTGTCTGTATCAAGACA +
Preference number: 4 (lower is better)
Translates to: FAEWFAGVMFHREVLDHIRGTET*CVCIKT
Trigger: TGTCTTGATACAGACACACCAAGTTTCTGTGCCTCT...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp CATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGGGAGATTCACAGAGAGGTCTTaGATCACATTAAACACCTCT +
Preference number: 4 (lower is better)
Translates to: HPLQQLVGSLRREDHSGRFTERS*ITLNTS
Trigger: AGAGGTGTTTAATGTGATCCAAGACCTCTCTGTGAA...TCTCCCCGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp ATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTGCTGTCTTTTCACAGAGAGGTCTTaGATCACATTAAACACCTCT +
Preference number: 4 (lower is better)
Translates to: IVPGDRGLVMAMTTDCCLFTERS*ITLNTS
Trigger: AGAGGTGTTTAATGTGATCCAAGACCTCTCTGTGAA...AAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGAGGCACTTTGCTGAGTaGTTTGCGGGGGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSRHFAE*FAGVMF
Trigger: AAACATTACCCCCGCAAACCACTCAGCAAAGTGCCT...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp ATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTGCTGTCTTCCCTGCTGGAAACTTTaGTTATATAGGAGATACCTA +
Preference number: 4 (lower is better)
Translates to: IVPGDRGLVMAMTTDCCLPCWKL*LYRRYL
Trigger: TAGGTATCTCCTATATAACCAAAGTTTCCAGCAGGG...AAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGTTTTTCTTGGAAAGGTaGCTGCCATTTTTCTACCTT +
Preference number: 4 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMFFLER*LPFFYL
Trigger: AAGGTAGAAAAATGGCAGCCACCTTTCCAAGAAAAA...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CAA 72 bp GTACTTCCCTGCACAAAGTACATAGCCAATGACCATTaGATGAGCAGAATATACTTGCCCACGTACCTGCTA +
Preference number: 4 (lower is better)
Translates to: VLPCTKYIANDH*MSRIYLPTYLL
Trigger: TAGCAGGTACGTGGGCAAGTATATTCTGCTCATCAAATGGTCATTGGCTATGTACTTTGTGCAGGGAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR CAA 72 bp TTCCATAATTTTCTAGCAGTCACCACCAAGAGCTCTTaGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: FHNFLAVTTKSS*FLLGERHFAEW
Trigger: CCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAAATTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR CAA 72 bp ACCCTTTCCATCTGTAAACATTGCACAGGTACACAGTaGCAGTCCACTGACATAAATGAGTGGGCTTCCATA +
Preference number: 4 (lower is better)
Translates to: TLSICKHCTGTQ*QSTDINEWASI
Trigger: TATGGAAGCCCACTCATTTATGTCAGTGGACTGCAACTGTGTACCTGTGCAATGTTTACAGATGGAAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp TTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTTTGTATATATGTGTCTaGATCTGGCAAGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: FLAVTTKSSLFLLGERHFLYICV*IWQGFP
Trigger: GGGAAAGCCTTGCCAGATTCAGACACATATATACAA...AAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTTCATCCTCAGACCTATaGCTCTACCATGGCGAAGGC +
Preference number: 4 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCSSSDL*LYHGEG
Trigger: GCCTTCGCCATGGTAGAGTCATAGGTCTGAGGATGA...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GTACTTCCCTGCACAAAGTACATAGCCAATGACCATTTGATGAGCAGAATATACTTTTGCAAGCAAGGGTaGGACAGCCACATTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VLPCTKYIANDHLMSRIYFCKQG*DSHIPH
Trigger: ATGAGGAATGTGGCTGTCTCACCCTTGCTTGCAAAA...GTATATTCTGCTCATCAAATGGTCATTGGCTATGTACTTTGTGCAGGGAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR GCA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGTTCCACGTTACTTCTTaGTTTGCGTTGTCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSFHVTS*FALSGD
Trigger: ATCCCCTGACAACGCAAAGCAAGAAGTAACGTGGAA...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp AGCAGAATATACTTGCCCACGTACCTGCTACCTGAATTTGTGTGTGTGTGTGTTAGATGGTGTTGTAGATaGCTTCTTGGTGTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SRIYLPTYLLPEFVCVCVRWCCR*LLGVWS
Trigger: TGACCAAACACCAAGAAGGCATCTACAACACCATCT...AACACACACACACACAAATTCAGGTAGCAGGTACGTGGGCAAGTATATTCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR GCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGTTGTTCTTCTCTGGCTaGTGGCCCCTCTTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKLFFSG*WPLLPG
Trigger: ACCAGGCAAGAGGGGCCAGCAGCCAGAGAAGAACAA...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp AACACCCAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATAACACCTCTGCTTCCTaGCTAACTAAACAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: NTQFHPLQQLVGSLRREDNTSAS*LTKQAV
Trigger: CACTGCCTGTTTAGTTAGGCAGGAAGCAGAGGTGTT...ATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTAGGCATGCCTGGGTCTaGAGTAAGGAGCATTGCTAT +
Preference number: 4 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPRHAWV*SKEHCY
Trigger: ATAGCAATGCTCCTTACTGCAGACCCAGGCATGCCT...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGACTTGCCCACGTACCTaGTACCTGAATTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVTCPRT*YLNLCV
Trigger: CACACACAAATTCAGGTAGCAGGTACGTGGGCAAGT...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp CCTTGCTGGTTAGGAAATTGTATATATGTGTCTGAATCTGGCAAGGCTTTCCCAGGTGTATGGGGGCCTTaGTGGTTAGGAAATTGTATA +
Preference number: 4 (lower is better)
Translates to: PCWLGNCIYVSESGKAFPGVWGP*WLGNCI
Trigger: TATACAATTTCCTAACCAGCAAGGCCCCCATACACC...TGGGAAAGCCTTGCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR GCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCAGAAATAGGAAAGCATaGATCTGTAACCTGAGTGGT +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVARNRKA*ICNLSG
Trigger: ACCACTCAGGTTACAGATGCATGCTTTCCTATTTCT...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCCATACACACAGTTTTTaGCCTAGTGGCTACTATAGA +
Preference number: 4 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVAHTHSF*PSGYYR
Trigger: TCTATAGTAGCCACTAGGGCAAAAACTGTGTGTATG...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp AGGTATTACAAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTTTCCTCTTCCAGCTTTaGGTTTGGGCATGCCACTGG +
Preference number: 4 (lower is better)
Translates to: RYYKLTLNNITYPTVTTVFLFQL*VWACHW
Trigger: CCAGTGGCATGCCCAAACCCAAAGCTGGAAGAGGAA...AACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTTGTAATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp GAGCTTTCAATGAATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGACTCCCAGGCAGATaGTGTTGTAGATGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: ELSMNFEPSHFKHLGTGEGLPGR*CCRCLL
Trigger: AAGAAGGCATCTACAACACCATCTGCCTGGGAGTCC...CTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp GTATGGATAAATGTTCTTTGTGCTTTGCATGTGGGGTATGCCAGAGACAGGTGGGTATGGGGGCCTTGCTaGTTAGGAAATTGTATATAT +
Preference number: 4 (lower is better)
Translates to: VWINVLCALHVGYARDRWVWGPC*LGNCIY
Trigger: ATATATACAATTTCCTAACCAGCAAGGCCCCCATAC...CCACCTGTCTCTGGCATACCCCACATGCAAAGCACAAAGAACATTTATCCATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CCA 90 bp GTATGGATAAATGTTCTTTGTGCTTTGCATGTGGGGTATGCCAGAGACAGGTGGCCCTGCTGGAAACTTTaGTTATATAGGAGATACCTA +
Preference number: 4 (lower is better)
Translates to: VWINVLCALHVGYARDRWPCWKL*LYRRYL
Trigger: TAGGTATCTCCTATATAACCAAAGTTTCCAGCAGGG...CCACCTGTCTCTGGCATACCCCACATGCAAAGCACAAAGAACATTTATCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CCA 90 bp ATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATAGTTCATCCTATAAGTaGATTAACTCTGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: MSSTSLGLVQADGKSFCYSSSYK*INSASQ
Trigger: TTGGGAAGCAGAGTTAATCCACTTATAGGATGAACT...ATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGAGTGCTTCTTTCTCTaGTCAAAGGGGTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: AGLNYDSQGHLLENPGARECFFL*SKGLMS
Trigger: ACTCATCAACCCCTTTGACCAGAGAAAGAAGCACTC...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTGTGGAAAGAAGAGAGTaGATATCAACAATGGCCTTA +
Preference number: 4 (lower is better)
Translates to: FAEWFAGVMFHREVLDHIVERRE*ISTMAL
Trigger: TAAGGCCATTGTTGATATCCACTCTCTTCTTTCCAC...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACGTGGAAAGAAGAGAGTaGATATCAACAATGGCCTTA +
Preference number: 4 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHVERRE*ISTMAL
Trigger: TAAGGCCATTGTTGATATCCACTCTCTTCTTTCCAC...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp AGGTATTACAAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTGTGACCAGGGAGGGCTaGGACATTTGTGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: RYYKLTLNNITYPTVTTVVTREG*DICVTE
Trigger: TTCTGTGACACAAATGTCCCAGCCCTCCCTGGTCAC...AACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTTGTAATACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CAA 72 bp TTGGGAACCATATTGAGATGTATGGATAAATGTTCTTaGTGCTTTGCATGTGGGGTATGCCAGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: LGTILRCMDKCS*CFACGVCQRQV
Trigger: CACCTGTCTCTGGCATACCCCACATGCAAAGCACAAAGAACATTTATCCATACATCTCAATATGGTTCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
3UTR CAA 72 bp TACATAGCCAATGACCATTTGATGAGCAGAATATACTaGCCCACGTACCTGCTACCTGAATTTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: YIANDHLMSRIY*PTYLLPEFVCV
Trigger: CACACACACAAATTCAGGTAGCAGGTACGTGGGCAAGTATATTCTGCTCATCAAATGGTCATTGGCTATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR TCA 90 bp CCTCTCAGTGGCAATGAGGACGGACTTTGTCATGAGTTACAAGAAAAGAGCTTTCATGCATCTGTAACCTaGGTGGTTTATGGAATAGAT +
Preference number: 4 (lower is better)
Translates to: PLSGNEDGLCHELQEKSFHASVT*VVYGID
Trigger: ATCTATTCCATAAACCACTCAGGTTACAGATGCATG...AAAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCCTCATTGCCACTGAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGCACATCACAACCTTATaGCATCACTTCCAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVHITTL*HHFQCC
Trigger: GCAACACTGGAAGTGATGTCATAAGGTTGTGATGTG...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp CCTCTCAGTGGCAATGAGGACGGACTTTGTCATGAGTTACAAGAAAAGAGCTTTACCAAGCAGCCCAAGTaGGCAAATAGAATATATCTT +
Preference number: 4 (lower is better)
Translates to: PLSGNEDGLCHELQEKSFTKQPK*ANRIYL
Trigger: AAGATATATTCTATTTGCTCACTTGGGCTGCTTGGT...AAAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCCTCATTGCCACTGAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GAGCTTTCAATGAATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGCTCCTAGATCATATCTaGCACTACGTCTCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: ELSMNFEPSHFKHLGTGELLDHI*HYVSAV
Trigger: GACAGCTGAGACGTAGTGTCAGATATGATCTAGGAG...CTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGCCTTGTCATGGCAATaGCAACTGACTGCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPALSWQ*QLTAVL
Trigger: TAAGACAGCAGTCAGTTGTCATTGCCATGACAAGGC...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CTCCTTTCATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTGTTGATCATTTCTGAGTaGTGTCTGAGTGGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: LLSCTCLFNKTFRAYPALLIISE*CLSGGN
Trigger: ATTACCCCCACTCAGACATCACTCAGAAATGATCAA...CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGTTGATCATTTCTGAGTaGTGTCTGAGTGGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSLIISE*CLSGGN
Trigger: ATTACCCCCACTCAGACATCACTCAGAAATGATCAA...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGTCATCCTCAGACCTATaGCTCTACCATGGCGAAGGC +
Preference number: 4 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKSSSDL*LYHGEG
Trigger: GCCTTCGCCATGGTAGAGTCATAGGTCTGAGGATGA...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp AACACCCAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATTTCCACGTTACTTCTTaGTTTGCGTTGTCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: NTQFHPLQQLVGSLRREDFHVTS*FALSGD
Trigger: ATCCCCTGACAACGCAAAGCAAGAAGTAACGTGGAA...ATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp TTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTTATTGGACACATAGCTaGCAAGACAGTATCCAAGAA +
Preference number: 4 (lower is better)
Translates to: FLAVTTKSSLFLLGERHFYWTHS*QDSIQE
Trigger: TTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATA...AAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp AACACCCAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATATGTTCTTTGTGCTTTaGATGTGGGGTATGCCAGAG +
Preference number: 4 (lower is better)
Translates to: NTQFHPLQQLVGSLRREDMFFVL*MWGMPE
Trigger: CTCTGGCATACCCCACATGCAAAGCACAAAGAACAT...ATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp TTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGATAAATGTTCTTTGTaGTTTGCATGTGGGGTATGC +
Preference number: 4 (lower is better)
Translates to: FLAVTTKSSLFLLGERHFDKCSL*FACGVC
Trigger: GCATACCCCACATGCAAAGCACAAAGAACATTTATC...AAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGTCCATCTGTAAACATTaGACAGGTACACAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSSICKH*TGTQLQ
Trigger: CTGCAACTGTGTACCTGTGCAATGTTTACAGATGGA...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTACCTGTGCCATACCGTaGACACATCACAACCTTATG +
Preference number: 4 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPTCAIP*THHNLM
Trigger: CATAAGGTTGTGATGTGTGCACGGTATGGCACAGGT...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGTCTGCATCCCACCTGTaGCATACCGTGCACACATCA +
Preference number: 4 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKSASHL*HTVHTS
Trigger: TGATGTGTGCACGGTATGGCACAGGTGGGATGCAGA...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp CTCCTTTCATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTGTCTTGGAAAGGTGGCTaGCATTTTTCTACCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LLSCTCLFNKTFRAYPALSWKGG*HFSTFL
Trigger: GAGAAAGGTAGAAAAATGGCAGCCACCTTTCCAAGA...CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp CATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGGGAGAAAGTTCTGTAAGTGTTaGCAAGGAACATCAGTATAT +
Preference number: 4 (lower is better)
Translates to: HPLQQLVGSLRREDHSGRKFCKC*QGTSVY
Trigger: ATATACTGATGTTCCTTGGCAACACTTACAGAACTT...TCTCCCCGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CCTTGCTGGTTAGGAAATTGTATATATGTGTCTGAATCTGGCAAGGCTTTCCCACTGAGGTTTGTTCCTTaGTTGAGTAGTTACTCTGTG +
Preference number: 4 (lower is better)
Translates to: PCWLGNCIYVSESGKAFPLRFVP*LSSYSV
Trigger: CACAGAGTAACTACTCAACCAAGGAACAAACCTCAG...TGGGAAAGCCTTGCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CCA 90 bp GTGGGCTTCCATAATTTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGTATGGGGGCCTTGCTaGTTAGGAAATTGTATATAT +
Preference number: 4 (lower is better)
Translates to: VGFHNFLAVTTKSSLFLLVWGPC*LGNCIY
Trigger: ATATATACAATTTCCTAACCAGCAAGGCCCCCATAC...AAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAAATTATGGAAGCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGAGAGGCACAGAAACTTaGTGTGTCTGTATCAAGACA +
Preference number: 4 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSRGTET*CVCIKT
Trigger: TGTCTTGATACAGACACACCAAGTTTCTGTGCCTCT...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGTGTCTTCCACATCCCTaGGTTTGGTGCAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKCLPHP*VWCRQM
Trigger: CATCTGCCTGCACCAAACCCAGGGATGTGGAAGACA...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTGGGCTTCCATAATTTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGTGGAAAGAAGAGAGTaGATATCAACAATGGCCTTA +
Preference number: 4 (lower is better)
Translates to: VGFHNFLAVTTKSSLFLLVERRE*ISTMAL
Trigger: TAAGGCCATTGTTGATATCCACTCTCTTCTTTCCAC...AAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAAATTATGGAAGCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
3UTR CAA 72 bp ATGTGCTCTCCAGCATTAAACACCCAATTTCATCCATaGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: MCSPALNTQFHP*QQLVGSLRRED
Trigger: ATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTTTAATGCTGGAGAGCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp GAGCTTTCAATGAATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGTCACTCAGCTGCTTTaGGTCTCAGTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: ELSMNFEPSHFKHLGTGEVTQLL*VSVSSS
Trigger: AGATGAAGAAACTGAGACTCAAAGCAGCTGAGTGAC...CTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR TCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGAGAAAGGCACTTTGCTaGGTGGTTTGCGGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKRKALC*VVCGGN
Trigger: ATTACCCCCGCAAACCACTCAGCAAAGTGCCTTTCT...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp AGCAGAATATACTTGCCCACGTACCTGCTACCTGAATTTGTGTGTGTGTGTGTTTGCAGGTTTAAATTATaGTTCACAGGGTCATCTGTT +
Preference number: 4 (lower is better)
Translates to: SRIYLPTYLLPEFVCVCVCRFKL*FTGSSV
Trigger: AACAGATGACCCTGTGAATCATAATTTAAACCTGCA...AACACACACACACACAAATTCAGGTAGCAGGTACGTGGGCAAGTATATTCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR GCA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGTATTGGACACATAGCTaGCAAGACAGTATCCAAGAA +
Preference number: 4 (lower is better)
Translates to: AGLNYDSQGHLLENPGARYWTHS*QDSIQE
Trigger: TTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATA...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATGATAAATGTTCTTTGTaGTTTGCATGTGGGGTATGC +
Preference number: 4 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHDKCSL*FACGVC
Trigger: GCATACCCCACATGCAAAGCACAAAGAACATTTATC...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp CCTTGCTGGTTAGGAAATTGTATATATGTGTCTGAATCTGGCAAGGCTTTCCCAAGAAATAGGAAAGCATaGATCTGTAACCTGAGTGGT +
Preference number: 4 (lower is better)
Translates to: PCWLGNCIYVSESGKAFPRNRKA*ICNLSG
Trigger: ACCACTCAGGTTACAGATGCATGCTTTCCTATTTCT...TGGGAAAGCCTTGCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR GCA 90 bp AACACCCAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATTCCATCTGTAAACATTaGACAGGTACACAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: NTQFHPLQQLVGSLRREDSICKH*TGTQLQ
Trigger: CTGCAACTGTGTACCTGTGCAATGTTTACAGATGGA...ATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp GAGCTTTCAATGAATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGTGTGTCACCTACATGTaGTCTCCAGCATTAAACACC +
Preference number: 4 (lower is better)
Translates to: ELSMNFEPSHFKHLGTGECVTYM*SPALNT
Trigger: GGTGTTTAATGCTGGAGAGCACATGTAGGTGACACA...CTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTTGTGTCACCTACATGTaGTCTCCAGCATTAAACACC +
Preference number: 4 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPCVTYM*SPALNT
Trigger: GGTGTTTAATGCTGGAGAGCACATGTAGGTGACACA...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTCTTAGGCTCCTTTCATaGACCTGTTTATTTAACAAA +
Preference number: 4 (lower is better)
Translates to: FAEWFAGVMFHREVLDHILRLLS*TCLFNK
Trigger: TTTGTTAAATAAACAGGTGCATGAAAGGAGCCTAAG...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp TCTCTATGTGACAAGGGGATAGAGAACCAGAGTGCTTCTTTCTCTGGTCAAAGGAAGTTCTGTAAGTGTTaGCAAGGAACATCAGTATAT +
Preference number: 4 (lower is better)
Translates to: SLCDKGIENQSASFSGQRKFCKC*QGTSVY
Trigger: ATATACTGATGTTCCTTGGCAACACTTACAGAACTT...CCTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATCCCCTTGTCACATAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACAAGTTCTGTAAGTGTTaGCAAGGAACATCAGTATAT +
Preference number: 4 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHKFCKC*QGTSVY
Trigger: ATATACTGATGTTCCTTGGCAACACTTACAGAACTT...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CTCCTTTCATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTGGTATGGGGGCCTTGCTaGTTAGGAAATTGTATATAT +
Preference number: 4 (lower is better)
Translates to: LLSCTCLFNKTFRAYPALVWGPC*LGNCIY
Trigger: ATATATACAATTTCCTAACCAGCAAGGCCCCCATAC...CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GTGGGCTTCCATAATTTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTAGTTCATCCTATAAGTaGATTAACTCTGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: VGFHNFLAVTTKSSLFLLSSSYK*INSASQ
Trigger: TTGGGAAGCAGAGTTAATCCACTTATAGGATGAACT...AAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAAATTATGGAAGCCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGACCTTTGAGGGAGTCTaGTCTCCAAGGCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKTFEGV*SPRPSV
Trigger: AACAGATGGCCTTGGAGACCAGACTCCCTCAAAGGT...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CCTCTCAGTGGCAATGAGGACGGACTTTGTCATGAGTTACAAGAAAAGAGCTTTGTCACATGTGGCTATTaGTACCATATTGAACCATAT +
Preference number: 4 (lower is better)
Translates to: PLSGNEDGLCHELQEKSFVTCGY*YHIEPY
Trigger: ATATGGTTCAATATGGTACCAATAGCCACATGTGAC...AAAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCCTCATTGCCACTGAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATAAAGTACATAGCCAATaGCCATTTGATGAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHKVHSQ*PFDEQN
Trigger: ATTCTGCTCATCAAATGGTCATTGGCTATGTACTTT...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp AGGTATTACAAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTGACAAACTCTCTATGTaGCAAGGGGATAGAGAACCA +
Preference number: 4 (lower is better)
Translates to: RYYKLTLNNITYPTVTTVDKLSM*QGDREP
Trigger: TGGTTCTCTATCCCCTTGTCACATAGAGAGTTTGTC...AACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTTGTAATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp CCTTGCTGGTTAGGAAATTGTATATATGTGTCTGAATCTGGCAAGGCTTTCCCAGATAATGTACTTCCCTaGACAAAGTACATAGCCAAT +
Preference number: 4 (lower is better)
Translates to: PCWLGNCIYVSESGKAFPDNVLP*TKYIAN
Trigger: ATTGGCTATGTACTTTGTGCAGGGAAGTACATTATC...TGGGAAAGCCTTGCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR GCA 90 bp AACACCCAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATGCAATGACAACTGACTaGTGTCTTAATTCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: NTQFHPLQQLVGSLRREDAMTTD*CLNSKE
Trigger: CTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGC...ATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGGGTTTATGGAATAGATaGTGTATGGGGGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKGLWNR*CMGALL
Trigger: CAGCAAGGCCCCCATACACCATCTATTCCATAAACC...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGAAAAGGATGCAACCTTaGCCACTTGTAATTTATTCC +
Preference number: 4 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVKRMQP*PLVIYS
Trigger: GGAATAAATTACAAGTGGTCAAGGTTGCATCCTTTT...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR TCA 90 bp GTACTTCCCTGCACAAAGTACATAGCCAATGACCATTTGATGAGCAGAATATACAAAGTACATAGCCAATaGCCATTTGATGAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: VLPCTKYIANDHLMSRIYKVHSQ*PFDEQN
Trigger: ATTCTGCTCATCAAATGGTCATTGGCTATGTACTTT...GTATATTCTGCTCATCAAATGGTCATTGGCTATGTACTTTGTGCAGGGAAGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR TCA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTGGACGGACTTTGTCATaGGTTACAAGAAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCGRTLS*VTRKEL
Trigger: AAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCC...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGTGTGTTACGTGCATGTaGACACACTTGGGAACCATA +
Preference number: 4 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKCVTCM*THLGTI
Trigger: TATGGTTCCCAAGTGTGTGCACATGCACGTAACACA...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGGATAATGTACTTCCCTaGACAAAGTACATAGCCAAT +
Preference number: 4 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVDNVLP*TKYIAN
Trigger: ATTGGCTATGTACTTTGTGCAGGGAAGTACATTATC...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTAGAAATAGGAAAGCATaGATCTGTAACCTGAGTGGT +
Preference number: 4 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPRNRKA*ICNLSG
Trigger: ACCACTCAGGTTACAGATGCATGCTTTCCTATTTCT...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTAGAGGCACAGAAACTTaGTGTGTCTGTATCAAGACA +
Preference number: 4 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCRGTET*CVCIKT
Trigger: TGTCTTGATACAGACACACCAAGTTTCTGTGCCTCT...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp GAGCTTTCAATGAATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGTTCACAGAGAGGTCTTaGATCACATTAAACACCTCT +
Preference number: 4 (lower is better)
Translates to: ELSMNFEPSHFKHLGTGEFTERS*ITLNTS
Trigger: AGAGGTGTTTAATGTGATCCAAGACCTCTCTGTGAA...CTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp AGGTATTACAAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTTTTGGTGCAGGCAGATaGCAAGTCATTCTGTTATGT +
Preference number: 4 (lower is better)
Translates to: RYYKLTLNNITYPTVTTVFGAGR*QVILLC
Trigger: ACATAACAGAATGACTTGCCATCTGCCTGCACCAAA...AACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTTGTAATACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGAGATGGTGTTGTAGATaGCTTCTTGGTGTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKRWCCR*LLGVWS
Trigger: TGACCAAACACCAAGAAGGCATCTACAACACCATCT...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR GCA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTGCAATGACAACTGACTaGTGTCTTAATTCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCAMTTD*CLNSKE
Trigger: CTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGC...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR GCA 90 bp AGGTATTACAAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTCATACACACAGTTTTTaGCCTAGTGGCTACTATAGA +
Preference number: 4 (lower is better)
Translates to: RYYKLTLNNITYPTVTTVHTHSF*PSGYYR
Trigger: TCTATAGTAGCCACTAGGGCAAAAACTGTGTGTATG...AACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTTGTAATACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CCA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTCACATGTGGCTATTaGTACCATATTGAACCATAT +
Preference number: 4 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPVTCGY*YHIEPY
Trigger: ATATGGTTCAATATGGTACCAATAGCCACATGTGAC...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR TCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGAAAAGGATGCAACCTTaGCCACTTGTAATTTATTCC +
Preference number: 4 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKKRMQP*PLVIYS
Trigger: GGAATAAATTACAAGTGGTCAAGGTTGCATCCTTTT...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CCA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGAGTTCATCCTATAAGTaGATTAACTCTGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKSSSYK*INSASQ
Trigger: TTGGGAAGCAGAGTTAATCCACTTATAGGATGAACT...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
3UTR CAA 72 bp AAACTTCTAGAGCATAACTTGCTCCCAAGGAGTGAATaGTCCATCTTTGTAATACAGTCACAATACAATAAA +
Preference number: 4 (lower is better)
Translates to: KLLEHNLLPRSE*SIFVIQSQYNK
Trigger: TTTATTGTATTGTGACTGTATTACAAAGATGGACAATTCACTCCTTGGGAGCAAGTTATGCTCTAGAAGTTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS CCA 90 bp TCTTTCGGTCCGCGGAAGGGCTTCCTGCAGGCCCAGGGAATCTCCTaGTTGCTGCCCCGTCTGACAGCGCCCCGGGCCCTGCCGCTGCCG +
Preference number: 5 (lower is better)
Translates to: SFGPRKGFLQAQGIS*LLPRLTAPRALPLP
Trigger: CGGCAGCGGCAGGGCCCGGGGCGCTGTCAGACGGGGCAGCAACCAGGAGATTCCCTGGGCCTGCAGGAAGCCCTTCCGCGGACCGAAAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563563.2
CDS CCA 90 bp TCTTTCGGTCCGCGGAAGGGCTTCCTGCAGGCCCAGGGAATCTCCTaGTTGCTGCCCCGTCTGACAGCGCCCCGGGCCCTGGAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: SFGPRKGFLQAQGIS*LLPRLTAPRALEGG
Trigger: ACCTCCCTCCAGGGCCCGGGGCGCTGTCAGACGGGGCAGCAACCAGGAGATTCCCTGGGCCTGCAGGAAGCCCTTCCGCGGACCGAAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000545251.6
ENST00000567124.5
CDS-3UTR CAA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCAAATGGCCAGCCAGCTaGGGGAGCCTCCTTCCACGT +
Preference number: 5 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRAKWPAS*GSLLPR
Trigger: ACGTGGAAGGAGGCTCCCCAAGCTGGCTGGCCATTT...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp ATTCCTCATCCTCAGACCTATGACTCTACCATGGCGAAGGCGGTGACCAGGGAGAAATGGCCAGCCAGCTaGGGGAGCCTCCTTCCACGT +
Preference number: 5 (lower is better)
Translates to: IPHPQTYDSTMAKAVTREKWPAS*GSLLPR
Trigger: ACGTGGAAGGAGGCTCCCCAAGCTGGCTGGCCATTT...CTCCCTGGTCACCGCCTTCGCCATGGTAGAGTCATAGGTCTGAGGATGAGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCCTAAAGCTGAGGTCCCATGGGTaGCCAGTGGCAGTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: ENPGARVTTKCPPSTGLKLRSHG*PVAVQG
Trigger: TCCCTGAACTGCCACTGGCAACCCATGGGACCTCAG...CTTTAGGCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CTGTTAGAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCCTTCCAGCTTTGGGTTaGGGCATGCCACTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: LLENPGARVTTKCPPSTGLPALG*GMPLAA
Trigger: TGCTGCCAGTGGCATGCCCAAACCCAAAGCTGGAAG...GCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTCTAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCCTTCCAGCTTTGGGTTaGGGCATGCCACTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPLPALG*GMPLAA
Trigger: TGCTGCCAGTGGCATGCCCAAACCCAAAGCTGGAAG...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CTGTTAGAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCCTCTGGTCAAAGGGGTaGATGAGTGGGAGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: LLENPGARVTTKCPPSTGLWSKG*MSGRPE
Trigger: CTCAGGCCTCCCACTCATCAACCCCTTTGACCAGAG...GCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTCTAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCCTAAAGTCCACATCCCTGGGTTaGGTGCAGGCAGATGGCAAG +
Preference number: 5 (lower is better)
Translates to: ENPGARVTTKCPPSTGLKSTSLG*VQADGK
Trigger: CTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGA...CTTTAGGCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCGGAGGGCTGGGACATTaGTGTCACAGAAAGAGTCCC +
Preference number: 5 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRAGGLGH*CHRKSP
Trigger: GGGACTCTTTCTGTGACACAAATGTCCCAGCCCTCC...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GGGAGATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTTGGGTTCCTTTTTGGTaGCCTCTGCACTCCCACCCC +
Preference number: 5 (lower is better)
Translates to: GRCLPHPWVWCRQMASHSWVPFW*PLHSHP
Trigger: GGGGTGGGAGTGCAGAGGCAACCAAAAAGGAACCCA...AGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423313.6
CDS-3UTR CAA 90 bp CTGTTAGAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCGTTCAGTGTGTGTCCTaGGGAAGGTCACTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LLENPGARVTTKCPPSTGVQCVS*GRSLSC
Trigger: GCAGCTGAGTGACCTTCCCAAGGACACACACTGAAC...GCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTCTAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR CAA 90 bp GGGAGATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTCTCTGGTCAAAGGGGTaGATGAGTGGGAGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: GRCLPHPWVWCRQMASHSLWSKG*MSGRPE
Trigger: CTCAGGCCTCCCACTCATCAACCCCTTTGACCAGAG...AGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGACAAAGGAGCAAGCAGTaGCCATGGAAACCATGTTAC +
Preference number: 5 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGQRSKQ*PWKPCY
Trigger: GTAACATGGTTTCCATGGCAACTGCTTGCTCCTTTG...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTAATTTACATGTCCGAGACAGCAGGGACATaGTGCCTGGAGATAGAGGCC +
Preference number: 5 (lower is better)
Translates to: HSGGESPPQLTVDLIYMSETAGT*CLEIEA
Trigger: GGCCTCTATCTCCAGGCACAATGTCCCTGCTGTCTC...GGACATGTAAATTAGATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS CCA 90 bp GTGGAATGTTCAGTGTGGTGGACTTCAGATTTGCCAGGCTTTGGATaGCAGCTTCCACCCCAGAGGGCAGTTCAGTGTGTGTCCTTGGGA +
Preference number: 5 (lower is better)
Translates to: VECSVWWTSDLPGFG*QLPPQRAVQCVSLG
Trigger: TCCCAAGGACACACACTGAACTGCCCTCTGGGGTGGAAGCTGCCATCCAAAGCCTGGCAAATCTGAAGTCCACCACACTGAACATTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567124.5
CDS-3UTR CAA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCCTTCCACGTTACTTCTaGCTTTGCGTTGTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRALPRYF*LCVVRG
Trigger: TCCCCTGACAACGCAAAGCAAGAAGTAACGTGGAAG...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGGTTTGCGGAAATGGCCAGCCAGCTaGGGGAGCCTCCTTCCACGT +
Preference number: 5 (lower is better)
Translates to: PRALCSCLEKGTLLSGLRKWPAS*GSLLPR
Trigger: ACGTGGAAGGAGGCTCCCCAAGCTGGCTGGCCATTT...CCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGAAATGTTCTTTGTGCTTaGCATGTGGGGTATGCCAGA +
Preference number: 5 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGNVLCA*HVGYAR
Trigger: TCTGGCATACCCCACATGCAAAGCACAAAGAACATT...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCACCTGCTACCTGAATTaGTGTGTGTGTGTGTTACGT +
Preference number: 5 (lower is better)
Translates to: LLPNLTLAGKALLSSLWITCYLN*CVCVLR
Trigger: ACGTAACACACACACACACAAATTCAGGTAGCAGGT...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCACATCACTTCCAGTGTaGCCTTCTGTGAGACTGCAC +
Preference number: 5 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRATSLPV*PSVRLH
Trigger: GTGCAGTCTCACAGAAGGCAACACTGGAAGTGATGT...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGAACCCAATTTCATCCATaGCAGCAATTAGTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGTQFHP*QQLVGS
Trigger: TGAGCCCACTAATTGCTGCAATGGATGAAATTGGGT...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS CCA 90 bp CTTCTTCTTCTTCTTGTTCTTCTCTGGCTGCTGGCCCCTCTTGCCTaGTGGGCTCCAGCAGCAATGGCAACAGATGAAGAGGAGTGTGAT +
Preference number: 5 (lower is better)
Translates to: LLLLLVLLWLLAPLA*WAPAAMATDEEECD
Trigger: ATCACACTCCTCTTCATCTGTTGCCATTGCTGCTGGAGCCCACCAGGCAAGAGGGGCCAGCAGCCAGAGAAGAACAAGAAGAAGAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS CCA 90 bp CTCTGTGGAATGTTCAGTGTGGTGGACTTCAGATTTGCCAGGCTTTaGATGGCAGCTTCCACCCCAGAGGGCAGTTCAGTGTGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: LCGMFSVVDFRFARL*MAASTPEGSSVCVL
Trigger: AAGGACACACACTGAACTGCCCTCTGGGGTGGAAGCTGCCATCCAAAGCCTGGCAAATCTGAAGTCCACCACACTGAACATTCCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567124.5
CDS-3UTR CAA 90 bp CTGTTAGAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCACGTTACTTCTTGCTTaGCGTTGTCAGGGGATCTCG +
Preference number: 5 (lower is better)
Translates to: LLENPGARVTTKCPPSTGTLLLA*RCQGIS
Trigger: CGAGATCCCCTGACAACGCAAAGCAAGAAGTAACGT...GCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTCTAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTAATTTACATGTCCTTCTCTCCATGGTGCTaGGCTAGATTAGGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: HSGGESPPQLTVDLIYMSFSPWC*ARLGPE
Trigger: CTCTGGCCCTAATCTAGCCAAGCACCATGGAGAGAA...GGACATGTAAATTAGATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp CCAGAGTGCTTCTTTCTCTGGTCAAAGGGGTTGATGAGTGGGAGGCCTGAGTGCATGCCTTCTTGGTGTTaGGTCAAGATGGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: PECFFLWSKGLMSGRPECMPSWC*VKMVSQ
Trigger: CTGGGACACCATCTTGACCAAACACCAAGAAGGCAT...GCACTCAGGCCTCCCACTCATCAACCCCTTTGACCAGAGAAAGAAGCACTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp AGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATGACTCTACCATGGCTGGAGAAGCTTGGGTaGAGCAGAGATCCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: SKGETATFLILRPMTLPWLEKLG*SRDPEV
Trigger: GACCTCTGGATCTCTGCTCAACCCAAGCTTCTCCAG...CCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCCTAAAGCACACTTTAAACATCTaGGCACAGGTGAGGGGTCAG +
Preference number: 5 (lower is better)
Translates to: ENPGARVTTKCPPSTGLKHTLNI*AQVRGQ
Trigger: CTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTG...CTTTAGGCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CTGCTTCCCAACCTCACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTTTCACAGAGAGGTCTaGGATCACATTAAACACCTC +
Preference number: 5 (lower is better)
Translates to: LLPNLTLAGKALLSSLWIFHREV*DHIKHL
Trigger: GAGGTGTTTAATGTGATCCAAGACCTCTCTGTGAAA...GATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTGAGGTTGGGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp TGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCTGGGATTGGAGAAAGGCACTTaGCTGAGTGGTTTGCGGGGG +
Preference number: 5 (lower is better)
Translates to: WTHSCQDSIQELSTWSLGLEKGT*LSGLRG
Trigger: CCCCCGCAAACCACTCAGCAAAGTGCCTTTCTCCAA...TCCCAGGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CAA 90 bp TTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCTGGAAACCATGTTACTaGTATGGTCCCGGATCCCGG +
Preference number: 5 (lower is better)
Translates to: LVQADGKSFCYVKGTARGWKPCY*YGPGSR
Trigger: CCGGGATCCGGGACCATACAAGTAACATGGTTTCCA...GCCTCTGGCTGTGCCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp TTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCTTACGCCAGGAAAGGTaGTCAGGGGAGTCTGTGATG +
Preference number: 5 (lower is better)
Translates to: LVQADGKSFCYVKGTARGLRQER*SGESVM
Trigger: CATCACAGACTCCCCTGACAACCTTTCCTGGCGTAA...GCCTCTGGCTGTGCCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGCTGAGGTCCCATGGGTaGCCAGTGGCAGTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRLRSHG*PVAVQG
Trigger: TCCCTGAACTGCCACTGGCAACCCATGGGACCTCAG...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp AGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATGACTCTACCATGGGGAGGGCTGGGACATTaGTGTCACAGAAAGAGTCCC +
Preference number: 5 (lower is better)
Translates to: SKGETATFLILRPMTLPWGGLGH*CHRKSP
Trigger: GGGACTCTTTCTGTGACACAAATGTCCCAGCCCTCC...CCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS TCA 90 bp AGAACTGCTTTCCTGGAGGTCACGTTCAACGTAGTAAACAATCGCTaGACACCCGCCCTGTGCATTCAGATCCTGATCACCGCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: RTAFLEVTFNVVNNR*TPALCIQILITAQF
Trigger: GAACTGGGCGGTGATCAGGATCTGAATGCACAGGGCGGGTGTTCAGCGATTGTTTACTACGTTGAACGTGACCTCCAGGAAAGCAGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000563563.2
CDS TCA 90 bp AGAACTGCTTTCCTGGAGGTCACGTTCAACGTAGTAAACAATCGCTaGACACCCGCCCTGTGCATTCAGATCCTGATCACCGCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: RTAFLEVTFNVVNNR*TPALCIQILITAQS
Trigger: AGACTGGGCGGTGATCAGGATCTGAATGCACAGGGCGGGTGTTCAGCGATTGTTTACTACGTTGAACGTGACCTCCAGGAAAGCAGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000545251.6
ENST00000567124.5
ENST00000619513.1
CDS GCA 90 bp TCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTCTTCTCTGGCTaGTGGCCCCTCTTGCCTGGTGGGCTCCAGCAGCAATGGCAACAG +
Preference number: 5 (lower is better)
Translates to: SFFFFFFFFFLFFSG*WPLLPGGLQQQWQQ
Trigger: CTGTTGCCATTGCTGCTGGAGCCCACCAGGCAAGAGGGGCCAGCAGCCAGAGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGACTTCTTGCTTTGCGTaGTCAGGGGATCTCGGCCAG +
Preference number: 5 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMTSCFA*SGDLGQ
Trigger: CTGGCCGAGATCCCCTGACAACGCAAAGCAAGAAGT...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp AGCAAGGGTGAGACAGCCACATTCCTCATCCTCAGACCTATGACTCTACCATGGATTCCTCTTCCAGCTTaGGGTTTGGGCATGCCACTG +
Preference number: 5 (lower is better)
Translates to: SKGETATFLILRPMTLPWIPLPA*GLGMPL
Trigger: CAGTGGCATGCCCAAACCCAAAGCTGGAAGAGGAAT...CCATGGTAGAGTCATAGGTCTGAGGATGAGGAATGTGGCTGTCTCACCCTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTAATTTACATGTCCATGCCTTCTTGGTGTTaGGTCAAGATGGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: HSGGESPPQLTVDLIYMSMPSWC*VKMVSQ
Trigger: CTGGGACACCATCTTGACCAAACACCAAGAAGGCAT...GGACATGTAAATTAGATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCTGGTGTATGGGGGCCTaGCTGGTTAGGAAATTGTAT +
Preference number: 5 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPWCMGA*LVRKLY
Trigger: ATACAATTTCCTAACCAGCAAGGCCCCCATACACCA...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp ATTCCTCATCCTCAGACCTATGACTCTACCATGGCGAAGGCGGTGACCAGGGAGACCACCAAGAGCTCTTaGTTCTTGCTTGGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: IPHPQTYDSTMAKAVTRETTKSS*FLLGER
Trigger: CCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGT...CTCCCTGGTCACCGCCTTCGCCATGGTAGAGTCATAGGTCTGAGGATGAGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp AGCCTGGCTAAAGCTGCTCAGAAGTCCAGGCCTAGGGGATGTCTTTCTCGAGCCTGCACAGGTACACAGTaGCAGTCCACTGACATAAAT +
Preference number: 5 (lower is better)
Translates to: SLAKAAQKSRPRGCLSRACTGTQ*QSTDIN
Trigger: ATTTATGTCAGTGGACTGCAACTGTGTACCTGTGCA...GGCTCGAGAAAGACATCCCCTAGGCCTGGACTTCTGAGCAGCTTTAGCCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCTCCACATCCCTGGGTTaGGTGCAGGCAGATGGCAAG +
Preference number: 5 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVSTSLG*VQADGK
Trigger: CTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGA...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGCCAAGGCCATCTGTTTaGCAAGCAAGGGTGAGACAG +
Preference number: 5 (lower is better)
Translates to: HIPGFGAGRWQVILLCEGPRPSV*QARVRQ
Trigger: CTGTCTCACCCTTGCTTGCAAAACAGATGGCCTTGG...CCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CACTCTGGCGGGGAAAGCCCTCCTCAGCTCACTGTGGATCTAATTTACATGTCCGGTCACTCAGCTGCTTaGAGTCTCAGTTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: HSGGESPPQLTVDLIYMSGHSAA*SLSFFI
Trigger: GATGAAGAAACTGAGACTCAAAGCAGCTGAGTGACC...GGACATGTAAATTAGATCCACAGTGAGCTGAGGAGGGCTTTCCCCGCCAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR CAA 90 bp ATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATACTTCTTGCTTTGCGTaGTCAGGGGATCTCGGCCAG +
Preference number: 5 (lower is better)
Translates to: MSSTSLGLVQADGKSFCYTSCFA*SGDLGQ
Trigger: CTGGCCGAGATCCCCTGACAACGCAAAGCAAGAAGT...ATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp TGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCTGGGAACGTTACTTCTTGCTTaGCGTTGTCAGGGGATCTCG +
Preference number: 5 (lower is better)
Translates to: WTHSCQDSIQELSTWSLGTLLLA*RCQGIS
Trigger: CGAGATCCCCTGACAACGCAAAGCAAGAAGTAACGT...TCCCAGGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CAA 90 bp AGCAGAATATACTTGCCCACGTACCTGCTACCTGAATTTGTGTGTGTGTGTGTTAAATGGCCAGCCAGCTaGGGGAGCCTCCTTCCACGT +
Preference number: 5 (lower is better)
Translates to: SRIYLPTYLLPEFVCVCVKWPAS*GSLLPR
Trigger: ACGTGGAAGGAGGCTCCCCAAGCTGGCTGGCCATTT...AACACACACACACACAAATTCAGGTAGCAGGTACGTGGGCAAGTATATTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CAA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACCTTCCAGCTTTGGGTTaGGGCATGCCACTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHLPALG*GMPLAA
Trigger: TGCTGCCAGTGGCATGCCCAAACCCAAAGCTGGAAG...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GTATGGATAAATGTTCTTTGTGCTTTGCATGTGGGGTATGCCAGAGACAGGTGGCTTCCAGCTTTGGGTTaGGGCATGCCACTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: VWINVLCALHVGYARDRWLPALG*GMPLAA
Trigger: TGCTGCCAGTGGCATGCCCAAACCCAAAGCTGGAAG...CCACCTGTCTCTGGCATACCCCACATGCAAAGCACAAAGAACATTTATCCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CAA 90 bp CCAGAGTGCTTCTTTCTCTGGTCAAAGGGGTTGATGAGTGGGAGGCCTGAGTGCGTTGTAGATGCCTTCTaGGTGTTTGGTCAAGATGGT +
Preference number: 5 (lower is better)
Translates to: PECFFLWSKGLMSGRPECVVDAF*VFGQDG
Trigger: ACCATCTTGACCAAACACCAAGAAGGCATCTACAAC...GCACTCAGGCCTCCCACTCATCAACCCCTTTGACCAGAGAAAGAAGCACTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCGTTGTAGATGCCTTCTaGGTGTTTGGTCAAGATGGT +
Preference number: 5 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPVVDAF*VFGQDG
Trigger: ACCATCTTGACCAAACACCAAGAAGGCATCTACAAC...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCCTGGAGAAGCTTGGGTaGAGCAGAGATCCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVLEKLG*SRDPEV
Trigger: GACCTCTGGATCTCTGCTCAACCCAAGCTTCTCCAG...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCACCTGCTACCTGAATTaGTGTGTGTGTGTGTTACGT +
Preference number: 5 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPTCYLN*CVCVLR
Trigger: ACGTAACACACACACACACAAATTCAGGTAGCAGGT...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GTCCTGAGGTCCCATGGGTTGCCAGTGGCAGTTCAGGGACAGAGGCTGGAAGGAATAGCCAATGACCATTaGATGAGCAGAATATACTTG +
Preference number: 5 (lower is better)
Translates to: VLRSHGLPVAVQGQRLEGIANDH*MSRIYL
Trigger: CAAGTATATTCTGCTCATCAAATGGTCATTGGCTAT...TCCTTCCAGCCTCTGTCCCTGAACTGCCACTGGCAACCCATGGGACCTCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGGGGGACTGTAGCAGGTaGCTGGAATGTCCAATTATG +
Preference number: 5 (lower is better)
Translates to: HIPGFGAGRWQVILLCEGGDCSR*LECPIM
Trigger: CATAATTGGACATTCCAGCAACCTGCTACAGTCCCC...CCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGTTGGAGAAAGGCACTTaGCTGAGTGGTTTGCGGGGG +
Preference number: 5 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRLEKGT*LSGLRG
Trigger: CCCCCGCAAACCACTCAGCAAAGTGCCTTTCTCCAA...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCTTGGAGAAAGGCACTTaGCTGAGTGGTTTGCGGGGG +
Preference number: 5 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVLEKGT*LSGLRG
Trigger: CCCCCGCAAACCACTCAGCAAAGTGCCTTTCTCCAA...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCTGCACAGGTACACAGTaGCAGTCCACTGACATAAAT +
Preference number: 5 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPCTGTQ*QSTDIN
Trigger: ATTTATGTCAGTGGACTGCAACTGTGTACCTGTGCA...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGACATCACTTCCAGTGTaGCCTTCTGTGAGACTGCAC +
Preference number: 5 (lower is better)
Translates to: HIPGFGAGRWQVILLCEGTSLPV*PSVRLH
Trigger: GTGCAGTCTCACAGAAGGCAACACTGGAAGTGATGT...CCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCCTTCTAGAGCATAACTaGCTCCCAAGGAGTGAATTG +
Preference number: 5 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPLLEHN*LPRSEL
Trigger: CAATTCACTCCTTGGGAGCAAGTTATGCTCTAGAAG...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGGTTTGCGGTTACGCCAGGAAAGGTaGTCAGGGGAGTCTGTGATG +
Preference number: 5 (lower is better)
Translates to: PRALCSCLEKGTLLSGLRLRQER*SGESVM
Trigger: CATCACAGACTCCCCTGACAACCTTTCCTGGCGTAA...CCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACCCAAGGCCATCTGTTTaGCAAGCAAGGGTGAGACAG +
Preference number: 5 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDPRPSV*QARVRQ
Trigger: CTGTCTCACCCTTGCTTGCAAAACAGATGGCCTTGG...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS GCA 90 bp CACGTTACTTCTTGCTTTGCGTTGTCAGGGGATCTCGGCCAGAACTaGTTTCCTGGAGGTCACGTTCAACGTAGTAAACAATCGCTGAAC +
Preference number: 5 (lower is better)
Translates to: HVTSCFALSGDLGQN*FPGGHVQRSKQSLN
Trigger: GTTCAGCGATTGTTTACTACGTTGAACGTGACCTCCAGGAAAGCAGTTCTGGCCGAGATCCCCTGACAACGCAAAGCAAGAAGTAACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000563563.2
ENST00000567124.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACACGTTACTTCTTGCTTaGCGTTGTCAGGGGATCTCG +
Preference number: 5 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDTLLLA*RCQGIS
Trigger: CGAGATCCCCTGACAACGCAAAGCAAGAAGTAACGT...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGTTCTCTCCATGGTGCTaGGCTAGATTAGGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRFSPWC*ARLGPE
Trigger: CTCTGGCCCTAATCTAGCCAAGCACCATGGAGAGAA...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp ATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATTTCTCTCCATGGTGCTaGGCTAGATTAGGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: MSSTSLGLVQADGKSFCYFSPWC*ARLGPE
Trigger: CTCTGGCCCTAATCTAGCCAAGCACCATGGAGAGAA...ATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACCTGGAGAAGCTTGGGTaGAGCAGAGATCCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHLEKLG*SRDPEV
Trigger: GACCTCTGGATCTCTGCTCAACCCAAGCTTCTCCAG...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACTTGGAGAAAGGCACTTaGCTGAGTGGTTTGCGGGGG +
Preference number: 5 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHLEKGT*LSGLRG
Trigger: CCCCCGCAAACCACTCAGCAAAGTGCCTTTCTCCAA...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp CACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTGTTATGTGAAGGGGCTCTTTGTTCTTGCTaGGAGAAAGGCACTTTGCTG +
Preference number: 5 (lower is better)
Translates to: HIPGFGAGRWQVILLCEGALCSC*EKGTLL
Trigger: CAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGC...CCCTTCACATAACAGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp AGTTGCCATGGAAACCATGTTACTTGTATGGTCCCGGATCCCGGTGATCCGCCCCTCCCAAGGAGTGAATaGTCCATCTTTGTAATACAG +
Preference number: 5 (lower is better)
Translates to: SCHGNHVTCMVPDPGDPPLPRSE*SIFVIQ
Trigger: CTGTATTACAAAGATGGACAATTCACTCCTTGGGAG...GGGCGGATCACCGGGATCCGGGACCATACAAGTAACATGGTTTCCATGGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp AGCAGAATATACTTGCCCACGTACCTGCTACCTGAATTTGTGTGTGTGTGTGTTCTCTGGTCAAAGGGGTaGATGAGTGGGAGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: SRIYLPTYLLPEFVCVCVLWSKG*MSGRPE
Trigger: CTCAGGCCTCCCACTCATCAACCCCTTTGACCAGAG...AACACACACACACACAAATTCAGGTAGCAGGTACGTGGGCAAGTATATTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR CAA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGTGGAAACCATGTTACTaGTATGGTCCCGGATCCCGG +
Preference number: 5 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRWKPCY*YGPGSR
Trigger: CCGGGATCCGGGACCATACAAGTAACATGGTTTCCA...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp TTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGAGACAGCAGGGACATaGTGCCTGGAGATAGAGGCC +
Preference number: 5 (lower is better)
Translates to: FLAVTTKSSLFLLGERHFETAGT*CLEIEA
Trigger: GGCCTCTATCTCCAGGCACAATGTCCCTGCTGTCTC...AAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS TCA 90 bp CCTCTCGGCTTACAAGCAGGTCCTGGGCTCAAAAGGATGCAACCTTaGCCACTTGTAATTTATTCCTCTTCCAGCTTTGGGTTTGGGCAT +
Preference number: 5 (lower is better)
Translates to: PLGLQAGPGLKRMQP*PLVIYSSSSFGFGH
Trigger: ATGCCCAAACCCAAAGCTGGAAGAGGAATAAATTACAAGTGGTCAAGGTTGCATCCTTTTGAGCCCAGGACCTGCTTGTAAGCCGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000567124.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GAGCTTTCAATGAATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGCAGGGAATCTCCTGGTaGCTGCCCCGTCTGACAGCG +
Preference number: 5 (lower is better)
Translates to: ELSMNFEPSHFKHLGTGEQGISW*LPRLTA
Trigger: CGCTGTCAGACGGGGCAGCAACCAGGAGATTCCCTG...CTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000545251.6
CDS-3UTR CAA 90 bp CATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGGGAGACTTCCACGTTACTTCTaGCTTTGCGTTGTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: HPLQQLVGSLRREDHSGRLPRYF*LCVVRG
Trigger: TCCCCTGACAACGCAAAGCAAGAAGTAACGTGGAAG...TCTCCCCGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACTTCTCTCCATGGTGCTaGGCTAGATTAGGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHFSPWC*ARLGPE
Trigger: CTCTGGCCCTAATCTAGCCAAGCACCATGGAGAGAA...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCATGCCTTCTTGGTGTTaGGTCAAGATGGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVMPSWC*VKMVSQ
Trigger: CTGGGACACCATCTTGACCAAACACCAAGAAGGCAT...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GGTGAGAGCAAGTCCATTGGATTAGGAGACAGCAGGGACATTGTGCCTGGAGATAATGTTCTTTGTGCTTaGCATGTGGGGTATGCCAGA +
Preference number: 5 (lower is better)
Translates to: GESKSIGLGDSRDIVPGDNVLCA*HVGYAR
Trigger: TCTGGCATACCCCACATGCAAAGCACAAAGAACATT...ATCTCCAGGCACAATGTCCCTGCTGTCTCCTAATCCAATGGACTTGCTCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACATGAGCAGAATATACTaGCCCACGTACCTGCTACCT +
Preference number: 5 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDMSRIY*PTYLLP
Trigger: AGGTAGCAGGTACGTGGGCAAGTATATTCTGCTCAT...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GCTATTGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCCAGAGGCACAGAAACTaGGTGTGTCTGTATCAAGAC +
Preference number: 5 (lower is better)
Translates to: AIGHIAAKTVSKNCPRGPQRHRN*VCLYQD
Trigger: GTCTTGATACAGACACACCAAGTTTCTGTGCCTCTG...GGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CAA 90 bp CCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGGTTTGCGGGCTCTTTGTTCTTGCTaGGAGAAAGGCACTTTGCTG +
Preference number: 5 (lower is better)
Translates to: PRALCSCLEKGTLLSGLRALCSC*EKGTLL
Trigger: CAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGC...CCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTTTGTCACATCACTTCCAGTGTaGCCTTCTGTGAGACTGCAC +
Preference number: 5 (lower is better)
Translates to: EVLDHIKHLSVAMRTDFVTSLPV*PSVRLH
Trigger: GTGCAGTCTCACAGAAGGCAACACTGGAAGTGATGT...GACAAAGTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GGGAGATGTCTTCCACATCCCTGGGTTTGGTGCAGGCAGATGGCAAGTCATTCTCTCCCAAGGAGTGAATaGTCCATCTTTGTAATACAG +
Preference number: 5 (lower is better)
Translates to: GRCLPHPWVWCRQMASHSLPRSE*SIFVIQ
Trigger: CTGTATTACAAAGATGGACAATTCACTCCTTGGGAG...AGAATGACTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGAAGACATCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp TCTCTATGTGACAAGGGGATAGAGAACCAGAGTGCTTCTTTCTCTGGTCAAAGGTGGAAACCATGTTACTaGTATGGTCCCGGATCCCGG +
Preference number: 5 (lower is better)
Translates to: SLCDKGIENQSASFSGQRWKPCY*YGPGSR
Trigger: CCGGGATCCGGGACCATACAAGTAACATGGTTTCCA...CCTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATCCCCTTGTCACATAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CCTTGCTGGTTAGGAAATTGTATATATGTGTCTGAATCTGGCAAGGCTTTCCCAGGTGTGGGTTCCTTTTaGGTTGCCTCTGCACTCCCA +
Preference number: 5 (lower is better)
Translates to: PCWLGNCIYVSESGKAFPGVGSF*VASALP
Trigger: TGGGAGTGCAGAGGCAACCAAAAAGGAACCCACACC...TGGGAAAGCCTTGCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423313.6
CDS-3UTR CAA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTCAGGGAATCTCCTGGTaGCTGCCCCGTCTGACAGCG +
Preference number: 5 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCQGISW*LPRLTA
Trigger: CGCTGTCAGACGGGGCAGCAACCAGGAGATTCCCTG...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423313.6
CDS-3UTR CAA 90 bp GGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGTCACTTCTTGCTTTGCGTaGTCAGGGGATCTCGGCCAG +
Preference number: 5 (lower is better)
Translates to: GLNYDSQGHLLENPGARVTSCFA*SGDLGQ
Trigger: CTGGCCGAGATCCCCTGACAACGCAAAGCAAGAAGT...GACCCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CCTTGCTGGTTAGGAAATTGTATATATGTGTCTGAATCTGGCAAGGCTTTCCCAACTTCTTGCTTTGCGTaGTCAGGGGATCTCGGCCAG +
Preference number: 5 (lower is better)
Translates to: PCWLGNCIYVSESGKAFPTSCFA*SGDLGQ
Trigger: CTGGCCGAGATCCCCTGACAACGCAAAGCAAGAAGT...TGGGAAAGCCTTGCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CAA 90 bp TCTCTATGTGACAAGGGGATAGAGAACCAGAGTGCTTCTTTCTCTGGTCAAAGGCTTCCACGTTACTTCTaGCTTTGCGTTGTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: SLCDKGIENQSASFSGQRLPRYF*LCVVRG
Trigger: TCCCCTGACAACGCAAAGCAAGAAGTAACGTGGAAG...CCTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATCCCCTTGTCACATAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp AGCAGAATATACTTGCCCACGTACCTGCTACCTGAATTTGTGTGTGTGTGTGTTATTCCTCTTCCAGCTTaGGGTTTGGGCATGCCACTG +
Preference number: 5 (lower is better)
Translates to: SRIYLPTYLLPEFVCVCVIPLPA*GLGMPL
Trigger: CAGTGGCATGCCCAAACCCAAAGCTGGAAGAGGAAT...AACACACACACACACAAATTCAGGTAGCAGGTACGTGGGCAAGTATATTCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CAA 90 bp GTGGGCTTCCATAATTTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTATTCCTCTTCCAGCTTaGGGTTTGGGCATGCCACTG +
Preference number: 5 (lower is better)
Translates to: VGFHNFLAVTTKSSLFLLIPLPA*GLGMPL
Trigger: CAGTGGCATGCCCAAACCCAAAGCTGGAAGAGGAAT...AAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAAATTATGGAAGCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGCTGGAGAAGCTTGGGTaGAGCAGAGATCCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSLEKLG*SRDPEV
Trigger: GACCTCTGGATCTCTGCTCAACCCAAGCTTCTCCAG...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp CCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGCTGAGTGGTTTGCGGAGGTTTGTTCCTTGGTaGAGTAGTTACTCTGTGGAC +
Preference number: 5 (lower is better)
Translates to: PRALCSCLEKGTLLSGLRRFVPW*SSYSVD
Trigger: GTCCACAGAGTAACTACTCAACCAAGGAACAAACCT...CCGCAAACCACTCAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GTGGGCTTCCATAATTTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGACAGTATCCAAGAATaGTCCACGTGGTCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: VGFHNFLAVTTKSSLFLLDSIQE*STWSLG
Trigger: TCCCAGGGACCACGTGGACAATTCTTGGATACTGTC...AAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAAATTATGGAAGCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp TTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGACAGTATCCAAGAATaGTCCACGTGGTCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: FLAVTTKSSLFLLGERHFDSIQE*STWSLG
Trigger: TCCCAGGGACCACGTGGACAATTCTTGGATACTGTC...AAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp CTGTTAGAAAACCCTGGTGCAAGGGTCACCACTAAATGCCCACCCTCCACAGGCCACTTGGGAACCATATaGAGATGTATGGATAAATGT +
Preference number: 5 (lower is better)
Translates to: LLENPGARVTTKCPPSTGHLGTI*RCMDKC
Trigger: ACATTTATCCATACATCTCAATATGGTTCCCAAGTG...GCCTGTGGAGGGTGGGCATTTAGTGGTGACCCTTGCACCAGGGTTTTCTAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACTGCATGTGCACACACTaGGGAACCATATTGAGATGT +
Preference number: 5 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDCMCTH*GTILRC
Trigger: ACATCTCAATATGGTTCCCAAGTGTGTGCACATGCA...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCCACACTTTAAACATCTaGGCACAGGTGAGGGGTCAG +
Preference number: 5 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVAHTLNI*AQVRGQ
Trigger: CTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTG...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GTATGGATAAATGTTCTTTGTGCTTTGCATGTGGGGTATGCCAGAGACAGGTGGACATCACTTCCAGTGTaGCCTTCTGTGAGACTGCAC +
Preference number: 5 (lower is better)
Translates to: VWINVLCALHVGYARDRWTSLPV*PSVRLH
Trigger: GTGCAGTCTCACAGAAGGCAACACTGGAAGTGATGT...CCACCTGTCTCTGGCATACCCCACATGCAAAGCACAAAGAACATTTATCCATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CAA 90 bp CACAGAGAGGTCTTGGATCACATTAAACACCTCTCAGTGGCAATGAGGACGGACACCCAATTTCATCCATaGCAGCAATTAGTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: HREVLDHIKHLSVAMRTDTQFHP*QQLVGS
Trigger: TGAGCCCACTAATTGCTGCAATGGATGAAATTGGGT...GTCCGTCCTCATTGCCACTGAGAGGTGTTTAATGTGATCCAAGACCTCTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GTCATTCTGTTATGTGAAGGGCACAGCCAGAGGCCCCATGACAAACTCTCTATGCTTCTAGAGCATAACTaGCTCCCAAGGAGTGAATTG +
Preference number: 5 (lower is better)
Translates to: VILLCEGHSQRPHDKLSMLLEHN*LPRSEL
Trigger: CAATTCACTCCTTGGGAGCAAGTTATGCTCTAGAAG...CATAGAGAGTTTGTCATGGGGCCTCTGGCTGTGCCCTTCACATAACAGAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGTCCACATCCCTGGGTTaGGTGCAGGCAGATGGCAAG +
Preference number: 5 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVSTSLG*VQADGK
Trigger: CTTGCCATCTGCCTGCACCAAACCCAGGGATGTGGA...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS CCA 90 bp CTAACTAAACAGGCAGTGATGGTCTCTTCTCCATCTGGAGAAGCTTaGGTTGAGCAGAGATCCAGAGGTCTTCTTCATCCTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LTKQAVMVSSPSGEA*VEQRSRGLLHPSSS
Trigger: AGAAGAAGAAGGATGAAGAAGACCTCTGGATCTCTGCTCAACCCAAGCTTCTCCAGATGGAGAAGAGACCATCACTGCCTGTTTAGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGGTTCAGTGTGTGTCCTaGGGAAGGTCACTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVVQCVS*GRSLSC
Trigger: GCAGCTGAGTGACCTTCCCAAGGACACACACTGAAC...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR CAA 90 bp AGCAGAATATACTTGCCCACGTACCTGCTACCTGAATTTGTGTGTGTGTGTGTTACGTTACTTCTTGCTTaGCGTTGTCAGGGGATCTCG +
Preference number: 5 (lower is better)
Translates to: SRIYLPTYLLPEFVCVCVTLLLA*RCQGIS
Trigger: CGAGATCCCCTGACAACGCAAAGCAAGAAGTAACGT...AACACACACACACACAAATTCAGGTAGCAGGTACGTGGGCAAGTATATTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CAA 90 bp CCTCTCAGTGGCAATGAGGACGGACTTTGTCATGAGTTACAAGAAAAGAGCTTTCTTCCACGTTACTTCTaGCTTTGCGTTGTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: PLSGNEDGLCHELQEKSFLPRYF*LCVVRG
Trigger: TCCCCTGACAACGCAAAGCAAGAAGTAACGTGGAAG...AAAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCCTCATTGCCACTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGAGGTTTGTTCCTTGGTaGAGTAGTTACTCTGTGGAC +
Preference number: 5 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRRFVPW*SSYSVD
Trigger: GTCCACAGAGTAACTACTCAACCAAGGAACAAACCT...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CCTTGCTGGTTAGGAAATTGTATATATGTGTCTGAATCTGGCAAGGCTTTCCCAGACAGTATCCAAGAATaGTCCACGTGGTCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: PCWLGNCIYVSESGKAFPDSIQE*STWSLG
Trigger: TCCCAGGGACCACGTGGACAATTCTTGGATACTGTC...TGGGAAAGCCTTGCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CAA 90 bp TCTCTATGTGACAAGGGGATAGAGAACCAGAGTGCTTCTTTCTCTGGTCAAAGGATGAGCAGAATATACTaGCCCACGTACCTGCTACCT +
Preference number: 5 (lower is better)
Translates to: SLCDKGIENQSASFSGQRMSRIY*PTYLLP
Trigger: AGGTAGCAGGTACGTGGGCAAGTATATTCTGCTCAT...CCTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATCCCCTTGTCACATAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACCAGAGGCACAGAAACTaGGTGTGTCTGTATCAAGAC +
Preference number: 5 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHQRHRN*VCLYQD
Trigger: GTCTTGATACAGACACACCAAGTTTCTGTGCCTCTG...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCGCTCTTTGTTCTTGCTaGGAGAAAGGCACTTTGCTG +
Preference number: 5 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVAALCSC*EKGTLL
Trigger: CAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGC...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGCTTCTAGAGCATAACTaGCTCCCAAGGAGTGAATTG +
Preference number: 5 (lower is better)
Translates to: HQYIFPVAGTFEGVWSPRLLEHN*LPRSEL
Trigger: CAATTCACTCCTTGGGAGCAAGTTATGCTCTAGAAG...CCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCCAAAGGAGCAAGCAGTaGCCATGGAAACCATGTTAC +
Preference number: 5 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVAQRSKQ*PWKPCY
Trigger: GTAACATGGTTTCCATGGCAACTGCTTGCTCCTTTG...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGTTACGCCAGGAAAGGTaGTCAGGGGAGTCTGTGATG +
Preference number: 5 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSLRQER*SGESVM
Trigger: CATCACAGACTCCCCTGACAACCTTTCCTGGCGTAA...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGGGAGGGCTGGGACATTaGTGTCACAGAAAGAGTCCC +
Preference number: 5 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVGGLGH*CHRKSP
Trigger: GGGACTCTTTCTGTGACACAAATGTCCCAGCCCTCC...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGATGCCTTCTTGGTGTTaGGTCAAGATGGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSMPSWC*VKMVSQ
Trigger: CTGGGACACCATCTTGACCAAACACCAAGAAGGCAT...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTGTTGTAGATGCCTTCTaGGTGTTTGGTCAAGATGGT +
Preference number: 5 (lower is better)
Translates to: FAEWFAGVMFHREVLDHIVVDAF*VFGQDG
Trigger: ACCATCTTGACCAAACACCAAGAAGGCATCTACAAC...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp TCTCTATGTGACAAGGGGATAGAGAACCAGAGTGCTTCTTTCTCTGGTCAAAGGAGGTTTGTTCCTTGGTaGAGTAGTTACTCTGTGGAC +
Preference number: 5 (lower is better)
Translates to: SLCDKGIENQSASFSGQRRFVPW*SSYSVD
Trigger: GTCCACAGAGTAACTACTCAACCAAGGAACAAACCT...CCTTTGACCAGAGAAAGAAGCACTCTGGTTCTCTATCCCCTTGTCACATAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GCTATTGGACACATAGCTGCCAAGACAGTATCCAAGAATTGTCCACGTGGTCCCATGGATAAATGTTCTTaGTGCTTTGCATGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: AIGHIAAKTVSKNCPRGPMDKCS*CFACGV
Trigger: TACCCCACATGCAAAGCACAAAGAACATTTATCCAT...GGGACCACGTGGACAATTCTTGGATACTGTCTTGGCAGCTATGTGTCCAATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CAA 90 bp GTGGGCTTCCATAATTTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTTGGTGTATGGGGGCCTaGCTGGTTAGGAAATTGTAT +
Preference number: 5 (lower is better)
Translates to: VGFHNFLAVTTKSSLFLLWCMGA*LVRKLY
Trigger: ATACAATTTCCTAACCAGCAAGGCCCCCATACACCA...AAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAAATTATGGAAGCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGTCGGGGACTGTAGCAGGTaGCTGGAATGTCCAATTATG +
Preference number: 5 (lower is better)
Translates to: GLNYDSQGHLLENPGARVGDCSR*LECPIM
Trigger: CATAATTGGACATTCCAGCAACCTGCTACAGTCCCC...GACCCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGCACACTTTAAACATCTaGGCACAGGTGAGGGGTCAG +
Preference number: 5 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSHTLNI*AQVRGQ
Trigger: CTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTG...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp ATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTGCTGTCTTTTTCACAGAGAGGTCTaGGATCACATTAAACACCTC +
Preference number: 5 (lower is better)
Translates to: IVPGDRGLVMAMTTDCCLFHREV*DHIKHL
Trigger: GAGGTGTTTAATGTGATCCAAGACCTCTCTGTGAAA...AAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCCTGTGTGCAAGGCACTaGCCTGAGCTTCAATATAAA +
Preference number: 5 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVALCARH*PELQYK
Trigger: TTTATATTGAAGCTCAGGCAAGTGCCTTGCACACAG...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp TTTGCTGAGTGGTTTGCGGGGGTAATGTTTCACAGAGAGGTCTTGGATCACATTCTGTGTGCAAGGCACTaGCCTGAGCTTCAATATAAA +
Preference number: 5 (lower is better)
Translates to: FAEWFAGVMFHREVLDHILCARH*PELQYK
Trigger: TTTATATTGAAGCTCAGGCAAGTGCCTTGCACACAG...AATGTGATCCAAGACCTCTCTGTGAAACATTACCCCCGCAAACCACTCAGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp ATTGTGCCTGGAGATAGAGGCCTTGTCATGGCAATGACAACTGACTGCTGTCTTCTCCCAAGGAGTGAATaGTCCATCTTTGTAATACAG +
Preference number: 5 (lower is better)
Translates to: IVPGDRGLVMAMTTDCCLLPRSE*SIFVIQ
Trigger: CTGTATTACAAAGATGGACAATTCACTCCTTGGGAG...AAGACAGCAGTCAGTTGTCATTGCCATGACAAGGCCTCTATCTCCAGGCACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGCTGAGGTCCCATGGGTaGCCAGTGGCAGTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKLRSHG*PVAVQG
Trigger: TCCCTGAACTGCCACTGGCAACCCATGGGACCTCAG...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GTACTTCCCTGCACAAAGTACATAGCCAATGACCATTTGATGAGCAGAATATACCCAAGGCCATCTGTTTaGCAAGCAAGGGTGAGACAG +
Preference number: 5 (lower is better)
Translates to: VLPCTKYIANDHLMSRIYPRPSV*QARVRQ
Trigger: CTGTCTCACCCTTGCTTGCAAAACAGATGGCCTTGG...GTATATTCTGCTCATCAAATGGTCATTGGCTATGTACTTTGTGCAGGGAAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423313.6
ENST00000444639.5
CDS-3UTR CAA 90 bp TTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTGGAGAAAGGCACTTTGTTGTAGATGCCTTCTaGGTGTTTGGTCAAGATGGT +
Preference number: 5 (lower is better)
Translates to: FLAVTTKSSLFLLGERHFVVDAF*VFGQDG
Trigger: ACCATCTTGACCAAACACCAAGAAGGCATCTACAAC...AAAGTGCCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GTACTTCCCTGCACAAAGTACATAGCCAATGACCATTTGATGAGCAGAATATACGGGGACTGTAGCAGGTaGCTGGAATGTCCAATTATG +
Preference number: 5 (lower is better)
Translates to: VLPCTKYIANDHLMSRIYGDCSR*LECPIM
Trigger: CATAATTGGACATTCCAGCAACCTGCTACAGTCCCC...GTATATTCTGCTCATCAAATGGTCATTGGCTATGTACTTTGTGCAGGGAAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CAA 90 bp CTCCTTTCATGCACCTGTTTATTTAACAAAACGTTTAGGGCCTATCCTGCACTGCAGAGGCACAGAAACTaGGTGTGTCTGTATCAAGAC +
Preference number: 5 (lower is better)
Translates to: LLSCTCLFNKTFRAYPALQRHRN*VCLYQD
Trigger: GTCTTGATACAGACACACCAAGTTTCTGTGCCTCTG...CAGTGCAGGATAGGCCCTAAACGTTTTGTTAAATAAACAGGTGCATGAAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GTCATGGCAATGACAACTGACTGCTGTCTTAATTCAAAGGAGCAAGCAGTTGCCTTTCACAGAGAGGTCTaGGATCACATTAAACACCTC +
Preference number: 5 (lower is better)
Translates to: VMAMTTDCCLNSKEQAVAFHREV*DHIKHL
Trigger: GAGGTGTTTAATGTGATCCAAGACCTCTCTGTGAAA...GGCAACTGCTTGCTCCTTTGAATTAAGACAGCAGTCAGTTGTCATTGCCATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp ATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGGGGTCAGAGGCACTTTCACAGAGAGGTCTaGGATCACATTAAACACCTC +
Preference number: 5 (lower is better)
Translates to: ILNHHTLNILAQVRGQRHFHREV*DHIKHL
Trigger: GAGGTGTTTAATGTGATCCAAGACCTCTCTGTGAAA...GTGCCTCTGACCCCTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp CAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTCGGCTCTTTGTTCTTGCTaGGAGAAAGGCACTTTGCTG +
Preference number: 5 (lower is better)
Translates to: QFHPLQQLVGSLRREDHSALCSC*EKGTLL
Trigger: CAGCAAAGTGCCTTTCTCCAAGCAAGAACAAAGAGC...CGAGTGATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GCAGGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGACCACCAAGAGCTCTTaGTTCTTGCTTGGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: AGLNYDSQGHLLENPGARTTKSS*FLLGER
Trigger: CCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGT...CCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATACCACCAAGAGCTCTTaGTTCTTGCTTGGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHTTKSS*FLLGER
Trigger: CCTTTCTCCAAGCAAGAACAAAGAGCTCTTGGTGGT...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GTGGGCTTCCATAATTTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTTGCACAGGTACACAGTaGCAGTCCACTGACATAAAT +
Preference number: 5 (lower is better)
Translates to: VGFHNFLAVTTKSSLFLLCTGTQ*QSTDIN
Trigger: ATTTATGTCAGTGGACTGCAACTGTGTACCTGTGCA...AAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAAATTATGGAAGCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp CCTCTCAGTGGCAATGAGGACGGACTTTGTCATGAGTTACAAGAAAAGAGCTTTACCCAATTTCATCCATaGCAGCAATTAGTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: PLSGNEDGLCHELQEKSFTQFHP*QQLVGS
Trigger: TGAGCCCACTAATTGCTGCAATGGATGAAATTGGGT...AAAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCCTCATTGCCACTGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATAGGTTTGTTCCTTGGTaGAGTAGTTACTCTGTGGAC +
Preference number: 5 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHRFVPW*SSYSVD
Trigger: GTCCACAGAGTAACTACTCAACCAAGGAACAAACCT...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATTGCATGTGCACACACTaGGGAACCATATTGAGATGT +
Preference number: 5 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHCMCTH*GTILRC
Trigger: ACATCTCAATATGGTTCCCAAGTGTGTGCACATGCA...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGTCTGCATGTGCACACACTaGGGAACCATATTGAGATGT +
Preference number: 5 (lower is better)
Translates to: GLNYDSQGHLLENPGARVCMCTH*GTILRC
Trigger: ACATCTCAATATGGTTCCCAAGTGTGTGCACATGCA...GACCCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CCTTGCTGGTTAGGAAATTGTATATATGTGTCTGAATCTGGCAAGGCTTTCCCAACCTGCTACCTGAATTaGTGTGTGTGTGTGTTACGT +
Preference number: 5 (lower is better)
Translates to: PCWLGNCIYVSESGKAFPTCYLN*CVCVLR
Trigger: ACGTAACACACACACACACAAATTCAGGTAGCAGGT...TGGGAAAGCCTTGCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CAA 90 bp GTACTTCCCTGCACAAAGTACATAGCCAATGACCATTTGATGAGCAGAATATACATGAGCAGAATATACTaGCCCACGTACCTGCTACCT +
Preference number: 5 (lower is better)
Translates to: VLPCTKYIANDHLMSRIYMSRIY*PTYLLP
Trigger: AGGTAGCAGGTACGTGGGCAAGTATATTCTGCTCAT...GTATATTCTGCTCATCAAATGGTCATTGGCTATGTACTTTGTGCAGGGAAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CAA 90 bp AACACCCAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATATGAGCAGAATATACTaGCCCACGTACCTGCTACCT +
Preference number: 5 (lower is better)
Translates to: NTQFHPLQQLVGSLRREDMSRIY*PTYLLP
Trigger: AGGTAGCAGGTACGTGGGCAAGTATATTCTGCTCAT...ATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGTCTGCACAGGTACACAGTaGCAGTCCACTGACATAAAT +
Preference number: 5 (lower is better)
Translates to: GLNYDSQGHLLENPGARVCTGTQ*QSTDIN
Trigger: ATTTATGTCAGTGGACTGCAACTGTGTACCTGTGCA...GACCCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGTCCTGTGTGCAAGGCACTaGCCTGAGCTTCAATATAAA +
Preference number: 5 (lower is better)
Translates to: GLNYDSQGHLLENPGARVLCARH*PELQYK
Trigger: TTTATATTGAAGCTCAGGCAAGTGCCTTGCACACAG...GACCCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CCTCTCAGTGGCAATGAGGACGGACTTTGTCATGAGTTACAAGAAAAGAGCTTTCTCCCAAGGAGTGAATaGTCCATCTTTGTAATACAG +
Preference number: 5 (lower is better)
Translates to: PLSGNEDGLCHELQEKSFLPRSE*SIFVIQ
Trigger: CTGTATTACAAAGATGGACAATTCACTCCTTGGGAG...AAAGCTCTTTTCTTGTAACTCATGACAAAGTCCGTCCTCATTGCCACTGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GTGGATCTAATTTACATGTCCTCACATACCTCAAGGCACATGTGTCACCTACATCTTCTAGAGCATAACTaGCTCCCAAGGAGTGAATTG +
Preference number: 5 (lower is better)
Translates to: VDLIYMSSHTSRHMCHLHLLEHN*LPRSEL
Trigger: CAATTCACTCCTTGGGAGCAAGTTATGCTCTAGAAG...ATGTAGGTGACACATGTGCCTTGAGGTATGTGAGGACATGTAAATTAGATCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGATTCCTCTTCCAGCTTaGGGTTTGGGCATGCCACTG +
Preference number: 5 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKIPLPA*GLGMPL
Trigger: CAGTGGCATGCCCAAACCCAAAGCTGGAAGAGGAAT...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp AACACCCAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATAATGTTCTTTGTGCTTaGCATGTGGGGTATGCCAGA +
Preference number: 5 (lower is better)
Translates to: NTQFHPLQQLVGSLRREDNVLCA*HVGYAR
Trigger: TCTGGCATACCCCACATGCAAAGCACAAAGAACATT...ATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GAGCTTTCAATGAATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGTGGTGTATGGGGGCCTaGCTGGTTAGGAAATTGTAT +
Preference number: 5 (lower is better)
Translates to: ELSMNFEPSHFKHLGTGEWCMGA*LVRKLY
Trigger: ATACAATTTCCTAACCAGCAAGGCCCCCATACACCA...CTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GAGCTTTCAATGAATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGAATGTTCTTTGTGCTTaGCATGTGGGGTATGCCAGA +
Preference number: 5 (lower is better)
Translates to: ELSMNFEPSHFKHLGTGENVLCA*HVGYAR
Trigger: TCTGGCATACCCCACATGCAAAGCACAAAGAACATT...CTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GGTTTAAATTATGATTCACAGGGTCATCTGTTAGAAAACCCTGGTGCAAGGGTCATGGATAAATGTTCTTaGTGCTTTGCATGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: GLNYDSQGHLLENPGARVMDKCS*CFACGV
Trigger: TACCCCACATGCAAAGCACAAAGAACATTTATCCAT...GACCCTTGCACCAGGGTTTTCTAACAGATGACCCTGTGAATCATAATTTAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp GTGGGCTTCCATAATTTTCTAGCAGTCACCACCAAGAGCTCTTTGTTCTTGCTTCACTTGGGAACCATATaGAGATGTATGGATAAATGT +
Preference number: 5 (lower is better)
Translates to: VGFHNFLAVTTKSSLFLLHLGTI*RCMDKC
Trigger: ACATTTATCCATACATCTCAATATGGTTCCCAAGTG...AAGCAAGAACAAAGAGCTCTTGGTGGTGACTGCTAGAAAATTATGGAAGCCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp TTTTCCTTTAAGAAGCCATTGATGGACCTCATTGATGGAAAGTTCTGTAAGTGTCAGAGGCACAGAAACTaGGTGTGTCTGTATCAAGAC +
Preference number: 5 (lower is better)
Translates to: FSFKKPLMDLIDGKFCKCQRHRN*VCLYQD
Trigger: GTCTTGATACAGACACACCAAGTTTCTGTGCCTCTG...ACACTTACAGAACTTTCCATCAATGAGGTCCATCAATGGCTTCTTAAAGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000619513.1
CDS-3UTR CAA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTACCCAATTTCATCCATaGCAGCAATTAGTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPTQFHP*QQLVGS
Trigger: TGAGCCCACTAATTGCTGCAATGGATGAAATTGGGT...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp AACACCCAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATATGGATAAATGTTCTTaGTGCTTTGCATGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: NTQFHPLQQLVGSLRREDMDKCS*CFACGV
Trigger: TACCCCACATGCAAAGCACAAAGAACATTTATCCAT...ATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp CCTTGCTGGTTAGGAAATTGTATATATGTGTCTGAATCTGGCAAGGCTTTCCCAATAGCCAATGACCATTaGATGAGCAGAATATACTTG +
Preference number: 5 (lower is better)
Translates to: PCWLGNCIYVSESGKAFPIANDH*MSRIYL
Trigger: CAAGTATATTCTGCTCATCAAATGGTCATTGGCTAT...TGGGAAAGCCTTGCCAGATTCAGACACATATATACAATTTCCTAACCAGCAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
CDS-3UTR CAA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGTGGTGTATGGGGGCCTaGCTGGTTAGGAAATTGTAT +
Preference number: 5 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKWCMGA*LVRKLY
Trigger: ATACAATTTCCTAACCAGCAAGGCCCCCATACACCA...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp AACACCCAATTTCATCCATTGCAGCAATTAGTGGGCTCACTTAGAAGAGAAGATCACTTGGGAACCATATaGAGATGTATGGATAAATGT +
Preference number: 5 (lower is better)
Translates to: NTQFHPLQQLVGSLRREDHLGTI*RCMDKC
Trigger: ACATTTATCCATACATCTCAATATGGTTCCCAAGTG...ATCTTCTCTTCTAAGTGAGCCCACTAATTGCTGCAATGGATGAAATTGGGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp AAGCTTACCCTTAACAACATCACATATCCAACAGTAACCACAGTTAGTTATAAGACCTGCTACCTGAATTaGTGTGTGTGTGTGTTACGT +
Preference number: 5 (lower is better)
Translates to: KLTLNNITYPTVTTVSYKTCYLN*CVCVLR
Trigger: ACGTAACACACACACACACAAATTCAGGTAGCAGGT...CTTATAACTAACTGTGGTTACTGTTGGATATGTGATGTTGTTAAGGGTAAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp TATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTGTGATAGCCAATGACCATTaGATGAGCAGAATATACTTG +
Preference number: 5 (lower is better)
Translates to: YSFILLSFKLCYLCIPPVIANDH*MSRIYL
Trigger: CAAGTATATTCTGCTCATCAAATGGTCATTGGCTAT...CACAGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp CTTTATAGCTTCATCCTACTTTCATTTAAACTCTGTTACCTCTGCATCCCACCTCACTTGGGAACCATATaGAGATGTATGGATAAATGT +
Preference number: 5 (lower is better)
Translates to: LYSFILLSFKLCYLCIPPHLGTI*RCMDKC
Trigger: ACATTTATCCATACATCTCAATATGGTTCCCAAGTG...AGGTGGGATGCAGAGGTAACAGAGTTTAAATGAAAGTAGGATGAAGCTATAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS-3UTR CAA 90 bp GAGCTTTCAATGAATTTTGAACCATCACACTTTAAACATCTTGGCACAGGTGAGATAGCCAATGACCATTaGATGAGCAGAATATACTTG +
Preference number: 5 (lower is better)
Translates to: ELSMNFEPSHFKHLGTGEIANDH*MSRIYL
Trigger: CAAGTATATTCTGCTCATCAAATGGTCATTGGCTAT...CTCACCTGTGCCAAGATGTTTAAAGTGTGATGGTTCAAAATTCATTGAAAGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS TCA 72 bp TGCAGGCCCAGGGAATCTCCTGGTTGCTGCCCCGTCTaGCAGCGCCCCGGGCCCTGGAGGGAGGTGTGGGTT +
Preference number: 6 (lower is better)
Translates to: CRPRESPGCCPV*QRPGPWREVWV
Trigger: AACCCACACCTCCCTCCAGGGCCCGGGGCGCTGTCAGACGGGGCAGCAACCAGGAGATTCCCTGGGCCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000545251.6
ENST00000567124.5
CDS GCA 72 bp TCACCGCCCAGTCTTTCGGTCCGCGGAAGGGCTTCCTaGAGGCCCAGGGAATCTCCTGGTTGCTGCCCCGTC +
Preference number: 6 (lower is better)
Translates to: SPPSLSVRGRAS*RPRESPGCCPV
Trigger: GACGGGGCAGCAACCAGGAGATTCCCTGGGCCTGCAGGAAGCCCTTCCGCGGACCGAAAGACTGGGCGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545251.6
CDS GCA 72 bp ATGGGGAACAATCTTTCGGTCCGCGGAAGGGCTTCCTaGAGGCCCAGGGAATCTCCTGGTTGCTGCCCCGTC +
Preference number: 6 (lower is better)
Translates to: MGNNLSVRGRAS*RPRESPGCCPV
Trigger: GACGGGGCAGCAACCAGGAGATTCCCTGGGCCTGCAGGAAGCCCTTCCGCGGACCGAAAGATTGTTCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000563563.2
ENST00000567124.5
CDS TCA 72 bp ACAATCGCTGAACACCCGCCCTGTGCATTCAGATCCTaGTCACCGCCCAGTCTTTCGGTCCGCGGAAGGGCT +
Preference number: 6 (lower is better)
Translates to: TIAEHPPCAFRS*SPPSLSVRGRA
Trigger: AGCCCTTCCGCGGACCGAAAGACTGGGCGGTGATCAGGATCTGAATGCACAGGGCGGGTGTTCAGCGATTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545251.6
CDS GCA 72 bp GTTTCTTCATCTCCAAAATGGGGAACAATCTGCCGCTaGCGCCGAGGGCAGCGCCCTCTGTGTTCCCTGCCT +
Preference number: 6 (lower is better)
Translates to: VSSSPKWGTICR*RRGQRPLCSLP
Trigger: AGGCAGGGAACACAGAGGGCGCTGCCCTCGGCGGCAGCGGCAGATTGTTCCCCATTTTGGAGATGAAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444639.5
CDS CCA 72 bp ATGCCACTGGCAGCACCTCCACACACAGCAGCAAAATaGCCAGCCAGCTTGGGGAGCCTCCTTCCACGTTAC +
Preference number: 6 (lower is better)
Translates to: MPLAAPPHTAAK*PASLGSLLPRY
Trigger: GTAACGTGGAAGGAGGCTCCCCAAGCTGGCTGGCCATTTTGCTGCTGTGTGTGGAGGTGCTGCCAGTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000563563.2
ENST00000567124.5
ENST00000619513.1
CDS CAA 90 bp ATGGCCAGCCAGCTTGGGGAGCCTCCTTCCACGTTACTTCTTGCTTaGCGTTGTCAGGGGATCTCGGCCAGAACTGCTTTCCTGGAGGTC +
Preference number: 6 (lower is better)
Translates to: MASQLGEPPSTLLLA*RCQGISARTAFLEV
Trigger: GACCTCCAGGAAAGCAGTTCTGGCCGAGATCCCCTGACAACGCAAAGCAAGAAGTAACGTGGAAGGAGGCTCCCCAAGCTGGCTGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000563563.2
ENST00000567124.5
ENST00000619513.1
CDS CAA 90 bp CCACTGGCAGCACCTCCACACACAGCAGCAAAATGGCCAGCCAGCTaGGGGAGCCTCCTTCCACGTTACTTCTTGCTTTGCGTTGTCAGG +
Preference number: 6 (lower is better)
Translates to: PLAAPPHTAAKWPAS*GSLLPRYFLLCVVR
Trigger: CCTGACAACGCAAAGCAAGAAGTAACGTGGAAGGAGGCTCCCCAAGCTGGCTGGCCATTTTGCTGCTGTGTGTGGAGGTGCTGCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000563563.2
ENST00000567124.5
ENST00000619513.1
CDS GCA 72 bp CAGCCAGCTTGGGGAGCCTCCTTCCACGTTACTTCTTaGTTTGCGTTGTCAGGGGATCTCGGCCAGAACTGC +
Preference number: 6 (lower is better)
Translates to: QPAWGASFHVTS*FALSGDLGQNC
Trigger: GCAGTTCTGGCCGAGATCCCCTGACAACGCAAAGCAAGAAGTAACGTGGAAGGAGGCTCCCCAAGCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000563563.2
ENST00000567124.5
ENST00000619513.1
CDS CAA 72 bp CCAGCCAGCTTGGGGAGCCTCCTTCCACGTTACTTCTaGCTTTGCGTTGTCAGGGGATCTCGGCCAGAACTG +
Preference number: 6 (lower is better)
Translates to: PASLGSLLPRYF*LCVVRGSRPEL
Trigger: CAGTTCTGGCCGAGATCCCCTGACAACGCAAAGCAAGAAGTAACGTGGAAGGAGGCTCCCCAAGCTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000563563.2
ENST00000567124.5
ENST00000619513.1
CDS CAA 90 bp CAGCCAGCTTGGGGAGCCTCCTTCCACGTTACTTCTTGCTTTGCGTaGTCAGGGGATCTCGGCCAGAACTGCTTTCCTGGAGGTCACGTT +
Preference number: 6 (lower is better)
Translates to: QPAWGASFHVTSCFA*SGDLGQNCFPGGHV
Trigger: AACGTGACCTCCAGGAAAGCAGTTCTGGCCGAGATCCCCTGACAACGCAAAGCAAGAAGTAACGTGGAAGGAGGCTCCCCAAGCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000563563.2
ENST00000567124.5
ENST00000619513.1
CDS CAA 90 bp CACCGCCCAGTCTCTGTGGAATGTTCAGTGTGGTGGACTTCAGATTaGCCAGGCTTTGGATGGCAGCTTCCACCCCAGAGGGCAGTTCAG +
Preference number: 6 (lower is better)
Translates to: HRPVSVECSVWWTSD*PGFGWQLPPQRAVQ
Trigger: CTGAACTGCCCTCTGGGGTGGAAGCTGCCATCCAAAGCCTGGCAAATCTGAAGTCCACCACACTGAACATTCCACAGAGACTGGGCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567124.5
CDS CCA 72 bp CACCTCCACACACAGCAGCAAAATGGCCAGCCAGCTTaGGGAGCCTCCTTCCACGTTACTTCTTGCTTTGCG +
Preference number: 6 (lower is better)
Translates to: HLHTQQQNGQPA*GASFHVTSCFA
Trigger: CGCAAAGCAAGAAGTAACGTGGAAGGAGGCTCCCCAAGCTGGCTGGCCATTTTGCTGCTGTGTGTGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000563563.2
ENST00000567124.5
ENST00000619513.1
CDS CAA 72 bp GCACCTCCACACACAGCAGCAAAATGGCCAGCCAGCTaGGGGAGCCTCCTTCCACGTTACTTCTTGCTTTGC +
Preference number: 6 (lower is better)
Translates to: APPHTAAKWPAS*GSLLPRYFLLC
Trigger: GCAAAGCAAGAAGTAACGTGGAAGGAGGCTCCCCAAGCTGGCTGGCCATTTTGCTGCTGTGTGTGGAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000563563.2
ENST00000567124.5
ENST00000619513.1
CDS TCA 72 bp ACAATCGCTGAACACCCGCCCTGTGCATTCAGATCCTaGTCACCGCCCAGTTCAGTGTGTGTCCTTGGGAAG +
Preference number: 6 (lower is better)
Translates to: TIAEHPPCAFRS*SPPSSVCVLGK
Trigger: CTTCCCAAGGACACACACTGAACTGGGCGGTGATCAGGATCTGAATGCACAGGGCGGGTGTTCAGCGATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000563563.2
CDS GCA 72 bp GGCCCAGGAGGACTCCCAGGCAGATGGTGTTGTAGATaGCTTCTTGGTGTTTGGTCAAGATGGTGTCCCAGA +
Preference number: 6 (lower is better)
Translates to: GPGGLPGRWCCR*LLGVWSRWCPR
Trigger: TCTGGGACACCATCTTGACCAAACACCAAGAAGGCATCTACAACACCATCTGCCTGGGAGTCCTCCTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS CAA 72 bp TGGGGAGCCTCCTTCCACGTTACTTCTTGCTTTGCGTaGTCAGGGGATCTCGGCCAGAACTGCTTTCCTGGA +
Preference number: 6 (lower is better)
Translates to: WGASFHVTSCFA*SGDLGQNCFPG
Trigger: TCCAGGAAAGCAGTTCTGGCCGAGATCCCCTGACAACGCAAAGCAAGAAGTAACGTGGAAGGAGGCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000563563.2
ENST00000567124.5
ENST00000619513.1
CDS CAA 72 bp CAGCTTGGGGAGCCTCCTTCCACGTTACTTCTTGCTTaGCGTTGTCAGGGGATCTCGGCCAGAACTGCTTTC +
Preference number: 6 (lower is better)
Translates to: QLGEPPSTLLLA*RCQGISARTAF
Trigger: GAAAGCAGTTCTGGCCGAGATCCCCTGACAACGCAAAGCAAGAAGTAACGTGGAAGGAGGCTCCCCAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000563563.2
ENST00000567124.5
ENST00000619513.1
CDS TCA 72 bp ACAATCGCTGAACACCCGCCCTGTGCATTCAGATCCTaGTCACCGCCCAGTCTCTGTGGAATGTTCAGTGTG +
Preference number: 6 (lower is better)
Translates to: TIAEHPPCAFRS*SPPSLCGMFSV
Trigger: CACACTGAACATTCCACAGAGACTGGGCGGTGATCAGGATCTGAATGCACAGGGCGGGTGTTCAGCGATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567124.5
CDS CCA 72 bp ATGTTCAGTGTGGTGGACTTCAGATTTGCCAGGCTTTaGATGGCAGCTTCCACCCCAGAGGGCAGTTCAGTG +
Preference number: 6 (lower is better)
Translates to: MFSVVDFRFARL*MAASTPEGSSV
Trigger: CACTGAACTGCCCTCTGGGGTGGAAGCTGCCATCCAAAGCCTGGCAAATCTGAAGTCCACCACACTGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567124.5
CDS CAA 90 bp TCTCTGTGGAATGTTCAGTGTGGTGGACTTCAGATTTGCCAGGCTTaGGATGGCAGCTTCCACCCCAGAGGGCAGTTCAGTGTGTGTCCT +
Preference number: 6 (lower is better)
Translates to: SLWNVQCGGLQICQA*DGSFHPRGQFSVCP
Trigger: AGGACACACACTGAACTGCCCTCTGGGGTGGAAGCTGCCATCCAAAGCCTGGCAAATCTGAAGTCCACCACACTGAACATTCCACAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567124.5
CDS GCA 72 bp TTCTTCTTCTTCTTCTTCTTCTTGTTCTTCTCTGGCTaGTGGCCCCTCTTGCCTGGTGGGCTCCAGCAGCAA +
Preference number: 6 (lower is better)
Translates to: FFFFFFFLFFSG*WPLLPGGLQQQ
Trigger: TTGCTGCTGGAGCCCACCAGGCAAGAGGGGCCAGCAGCCAGAGAAGAACAAGAAGAAGAAGAAGAAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS CCA 72 bp GATCACCGCCCAGTCTCTGTGGAATGTTCAGTGTGGTaGACTTCAGATTTGCCAGGCTTTGGATGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: DHRPVSVECSVW*TSDLPGFGWQL
Trigger: AAGCTGCCATCCAAAGCCTGGCAAATCTGAAGTCCACCACACTGAACATTCCACAGAGACTGGGCGGTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567124.5
CDS CAA 72 bp AATGTTCAGTGTGGTGGACTTCAGATTTGCCAGGCTTaGGATGGCAGCTTCCACCCCAGAGGGCAGTTCAGT +
Preference number: 6 (lower is better)
Translates to: NVQCGGLQICQA*DGSFHPRGQFS
Trigger: ACTGAACTGCCCTCTGGGGTGGAAGCTGCCATCCAAAGCCTGGCAAATCTGAAGTCCACCACACTGAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567124.5
CDS CAA 90 bp CAGAGGTCTTCTTCATCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTaGTTCTTCTCTGGCTGCTGGCCCCTCTTGCCTGGTGGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: QRSSSSFFFFFFFFF*FFSGCWPLLPGGLQ
Trigger: CTGGAGCCCACCAGGCAAGAGGGGCCAGCAGCCAGAGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGATGAAGAAGACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS TCA 72 bp TTCCTGGAGGTCACGTTCAACGTAGTAAACAATCGCTaGACACCCGCCCTGTGCATTCAGATCCTGATCACC +
Preference number: 6 (lower is better)
Translates to: FLEVTFNVVNNR*TPALCIQILIT
Trigger: GGTGATCAGGATCTGAATGCACAGGGCGGGTGTTCAGCGATTGTTTACTACGTTGAACGTGACCTCCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000563563.2
ENST00000567124.5
ENST00000619513.1
CDS CCA 72 bp CAGGCAGTGATGGTCTCTTCTCCATCTGGAGAAGCTTaGGTTGAGCAGAGATCCAGAGGTCTTCTTCATCCT +
Preference number: 6 (lower is better)
Translates to: QAVMVSSPSGEA*VEQRSRGLLHP
Trigger: AGGATGAAGAAGACCTCTGGATCTCTGCTCAACCCAAGCTTCTCCAGATGGAGAAGAGACCATCACTGCCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS CAA 72 bp GAGGACTCCCAGGCAGATGGTGTTGTAGATGCCTTCTaGGTGTTTGGTCAAGATGGTGTCCCAGATAGAGCT +
Preference number: 6 (lower is better)
Translates to: EDSQADGVVDAF*VFGQDGVPDRA
Trigger: AGCTCTATCTGGGACACCATCTTGACCAAACACCAAGAAGGCATCTACAACACCATCTGCCTGGGAGTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1
CDS GCA 72 bp TCTTGCTTTGCGTTGTCAGGGGATCTCGGCCAGAACTaGTTTCCTGGAGGTCACGTTCAACGTAGTAAACAA +
Preference number: 6 (lower is better)
Translates to: SCFALSGDLGQN*FPGGHVQRSKQ
Trigger: TTGTTTACTACGTTGAACGTGACCTCCAGGAAAGCAGTTCTGGCCGAGATCCCCTGACAACGCAAAGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000563563.2
ENST00000567124.5
ENST00000619513.1
CDS CAA 72 bp TCTTCATCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTaGTTCTTCTCTGGCTGCTGGCCCCTCTTGCCTGGT +
Preference number: 6 (lower is better)
Translates to: SSSFFFFFFFFF*FFSGCWPLLPG
Trigger: ACCAGGCAAGAGGGGCCAGCAGCCAGAGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423313.6
ENST00000444639.5
ENST00000545251.6
ENST00000619513.1