RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KHSRP (Homo sapiens)

Ensembl gene IDs: ENSG00000088247

Ensembl transcript IDs: ENST00000398148.7, ENST00000594496.5, ENST00000597704.1, ENST00000600480.2, ENST00000619396.4

Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGTGGTGGCGGCCGGGCCGGTGCCCACCGTCCGCGCTGTCTGCCTaGCCCCCGACTCCCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCT +
Preference number: 1 (lower is better)
Translates to: RWWRPGRCPPSALSA*PPTPQQFRSPACES
Trigger: AGACTCGCAGGCGGGACTTCTGAACTGCTGGGGAGTCGGGGGGCAGGCAGACAGCGCGGACGGTGGGCACCGGCCCGGCCGCCACCACCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR CCA 90 bp CTTCGTTTAACCTCTGGACCCAGCGAATGCTTCCCTGGCGGTGCGTaGGGACTCCCGGAGACCTCCGGCCACACGGCCCCCGCTGCAGGC +
Preference number: 1 (lower is better)
Translates to: LRLTSGPSECFPGGA*GLPETSGHTAPAAG
Trigger: GCCTGCAGCGGGGGCCGTGTGGCCGGAGGTCTCCGGGAGTCCCCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGAGGTTAAACGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR CCA 90 bp ACAGGAACAAGCAGCCGGCGCAGGGAGGCCTCTTCGTTTAACCTCTaGACCCAGCGAATGCTTCCCTGGCGGTGCGTGGGGACTCCCGGA +
Preference number: 1 (lower is better)
Translates to: TGTSSRRREASSFNL*TQRMLPWRCVGTPG
Trigger: TCCGGGAGTCCCCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGAGGTTAAACGAAGAGGCCTCCCTGCGCCGGCTGCTTGTTCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR GCA 90 bp GCTGGCTCAGGCTGGAAGGACGTGCTTGTTAACTGTCTAGCCAGGTaGTCGCGGGACTCGCTGAAGTCACGCTGCTCCCTGATGGAGAAG +
Preference number: 1 (lower is better)
Translates to: AGSGWKDVLVNCLAR*SRDSLKSRCSLMEK
Trigger: CTTCTCCATCAGGGAGCAGCGTGACTTCAGCGAGTCCCGCGAGCACCTGGCTAGACAGTTAACAAGCACGTCCTTCCAGCCTGAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
3UTR-3UTR GCA 90 bp CCCGACTCCCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCATGCTTCCCTGGCGGTaGGTGGGGACTCCCGGAGAC +
Preference number: 2 (lower is better)
Translates to: PDSPAVQKSRLRVSALPSMLPWR*VGTPGD
Trigger: GTCTCCGGGAGTCCCCACGCACCGCCAGGGAAGCAT...GCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAACTGCTGGGGAGTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR-3UTR CCA 90 bp TTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCATGGGTTCCCTGGCGGTGCGTaGGGACTCCCGGAGACCTCC +
Preference number: 2 (lower is better)
Translates to: FTPTSQTSPGHRQARAHGFPGGA*GLPETS
Trigger: GGAGGTCTCCGGGAGTCCCCACGCACCGCCAGGGAA...CCCATGCGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR-3UTR GCA 90 bp GATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCAATGCTTCCCTGGCGGTaGGTGGGGACTCCCGGAGAC +
Preference number: 2 (lower is better)
Translates to: DLHAHFTDKPGTQASASAMLPWR*VGTPGD
Trigger: GTCTCCGGGAGTCCCCACGCACCGCCAGGGAAGCAT...TGCGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR-3UTR GCA 90 bp TTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCATGGGTCTGGACCCAGCGAATaGTTCCCTGGCGGTGCGTGG +
Preference number: 2 (lower is better)
Translates to: FTPTSQTSPGHRQARAHGSGPSE*FPGGAW
Trigger: CCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGA...CCCATGCGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR-3UTR GCA 90 bp GCCAGGTGCTCGCGGGACTCGCTGAAGTCACGCTGCTCCCTGATGGAGAAGGAGTCTGGACCCAGCGAATaGTTCCCTGGCGGTGCGTGG +
Preference number: 2 (lower is better)
Translates to: ARCSRDSLKSRCSLMEKESGPSE*FPGGAW
Trigger: CCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGA...CTCCTTCTCCATCAGGGAGCAGCGTGACTTCAGCGAGTCCCGCGAGCACCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
3UTR-3UTR CCA 90 bp TGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCTTCCCTGGCGGTGCGTaGGGACTCCCGGAGACCTCC +
Preference number: 2 (lower is better)
Translates to: WQRSSRPLHRQARDTGKRFPGGA*GLPETS
Trigger: GGAGGTCTCCGGGAGTCCCCACGCACCGCCAGGGAA...GCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR-3UTR CCA 90 bp TTGGAAGGTGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCATaGGAGGCTGAGCCCGGCGGG +
Preference number: 2 (lower is better)
Translates to: LEGGNDLHAHFTDKPGTQASASA*EAEPGG
Trigger: CCCGCCGGGCTCAGCCTCCCATGCGCTCGCGCTTGC...CTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCACCTTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR-3UTR GCA 90 bp TTGGAAGGTGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGTCCGCGCTGTCTGCCTaGCCCCCGACTCCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: LEGGNDLHAHFTDKPGTQSALSA*PPTPQQ
Trigger: CTGCTGGGGAGTCGGGGGGCAGGCAGACAGCGCGGA...CTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCACCTTCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR-3UTR TCA 90 bp GCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCCAAGTGGCCAGATTGTaGGCGAGGTGGTGGCGGCCG +
Preference number: 2 (lower is better)
Translates to: AGGRGPAIQHLVQGMFHLQVARL*ARWWRP
Trigger: CGGCCGCCACCACCTCGCTCACAATCTGGCCACTTG...GAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600480.2
3UTR-3UTR GCA 90 bp ACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCAGAGCCAGGCCGCCTaGAACACAGTCACTTGGACA +
Preference number: 2 (lower is better)
Translates to: TIFTPTSQTSPGHRQARAQSQAA*NTVTWT
Trigger: TGTCCAAGTGACTGTGTTGCAGGCGGCCTGGCTCTG...CGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR-3UTR CCA 90 bp CTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCAGCGAATGCTTCCCTaGCGGTGCGTGGGGACTCCC +
Preference number: 2 (lower is better)
Translates to: LGCWGKGSCNTTPGPRNVQRMLP*RCVGTP
Trigger: GGGAGTCCCCACGCACCGCCAGGGAAGCATTCGCTG...AACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600480.2
3UTR-3UTR GCA 90 bp GCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCAACTGTCTAGCCAGGTaGTCGCGGGACTCGCTGAAG +
Preference number: 2 (lower is better)
Translates to: AGGRGPAIQHLVQGMFHLNCLAR*SRDSLK
Trigger: CTTCAGCGAGTCCCGCGAGCACCTGGCTAGACAGTT...GAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600480.2
3UTR-3UTR CCA 90 bp TGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCTCTTCGTTTAACCTCTaGACCCAGCGAATGCTTCCC +
Preference number: 2 (lower is better)
Translates to: WQRSSRPLHRQARDTGKRSSFNL*TQRMLP
Trigger: GGGAAGCATTCGCTGGGTCCAGAGGTTAAACGAAGA...GCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR-3UTR CCA 90 bp ATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCATTCTTCGTTTAACCTCTaGACCCAGCGAATGCTTCCC +
Preference number: 2 (lower is better)
Translates to: IFTPTSQTSPGHRQARAHSSFNL*TQRMLP
Trigger: GGGAAGCATTCGCTGGGTCCAGAGGTTAAACGAAGA...ATGCGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR-3UTR CCA 90 bp ATTGAGCCTGCGGAGAGGGAAGAGATAGGAATTGGTCACTACGGGGAGGGAAGGCGTTTTCTTCCCAAGTaGCCAGATTGTGAGCGAGGT +
Preference number: 2 (lower is better)
Translates to: IEPAEREEIGIGHYGEGRRFLPK*PDCERG
Trigger: ACCTCGCTCACAATCTGGCCACTTGGGAAGAAAACG...CCTTCCCTCCCCGTAGTGACCAATTCCTATCTCTTCCCTCTCCGCAGGCTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600480.2
3UTR-3UTR TCA 90 bp GCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCCTCCTCTTGAACAGATaGAAAGACAACAGACCAGTC +
Preference number: 2 (lower is better)
Translates to: AGGRGPAIQHLVQGMFHLLLLNR*KDNRPV
Trigger: GACTGGTCTGTTGTCTTTTCATCTGTTCAAGAGGAG...GAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
3UTR-3UTR GCA 90 bp TTTCAATCTCCTCTTGAACAGATGAAAAGACAACAGACCAGTCCTGGGAGGGGGTGGGGGAAGGGGTCCTaGAATACAACACCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: FQSPLEQMKRQQTSPGRGWGKGS*NTTPGP
Trigger: TGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCA...CCCCCTCCCAGGACTGGTCTGTTGTCTTTTCATCTGTTCAAGAGGAGATTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
3UTR-3UTR CCA 90 bp AACATCTATAAAGAACAAACATCCGCTTCAAAACTACAGGGAGGGAAGGAAAGGACAATCCAGAGATCATaGTGTCCCCACAACACCCCT +
Preference number: 2 (lower is better)
Translates to: NIYKEQTSASKLQGGKERTIQRS*CPHNTP
Trigger: AGGGGTGTTGTGGGGACACCATGATCTCTGGATTGT...CCTTTCCTTCCCTCCCTGTAGTTTTGAAGCGGATGTTTGTTCTTTATAGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600480.2
3UTR-3UTR TCA 90 bp AACATCTATAAAGAACAAACATCCGCTTCAAAACTACAGGGAGGGAAGGAAAGGGTTTCAATCTCCTCTTaGACAGATGAAAAGACAACA +
Preference number: 2 (lower is better)
Translates to: NIYKEQTSASKLQGGKERVSISS*TDEKTT
Trigger: TGTTGTCTTTTCATCTGTTCAAGAGGAGATTGAAAC...CCTTTCCTTCCCTCCCTGTAGTTTTGAAGCGGATGTTTGTTCTTTATAGATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600480.2
3UTR GCA 72 bp CGGCCGGGCCGGTGCCCACCGTCCGCGCTGTCTGCCTaGCCCCCGACTCCCCAGCAGTTCAGAAGTCCCGCC +
Preference number: 3 (lower is better)
Translates to: RPGRCPPSALSA*PPTPQQFRSPA
Trigger: GGCGGGACTTCTGAACTGCTGGGGAGTCGGGGGGCAGGCAGACAGCGCGGACGGTGGGCACCGGCCCGGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR CCA 72 bp ACCTCTGGACCCAGCGAATGCTTCCCTGGCGGTGCGTaGGGACTCCCGGAGACCTCCGGCCACACGGCCCCC +
Preference number: 3 (lower is better)
Translates to: TSGPSECFPGGA*GLPETSGHTAP
Trigger: GGGGGCCGTGTGGCCGGAGGTCTCCGGGAGTCCCCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGAGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR CCA 72 bp AGCAGCCGGCGCAGGGAGGCCTCTTCGTTTAACCTCTaGACCCAGCGAATGCTTCCCTGGCGGTGCGTGGGG +
Preference number: 3 (lower is better)
Translates to: SSRRREASSFNL*TQRMLPWRCVG
Trigger: CCCCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGAGGTTAAACGAAGAGGCCTCCCTGCGCCGGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR GCA 72 bp GGGAGGCCTCTTCGTTTAACCTCTGGACCCAGCGAATaGTTCCCTGGCGGTGCGTGGGGACTCCCGGAGACC +
Preference number: 3 (lower is better)
Translates to: GRPLRLTSGPSE*FPGGAWGLPET
Trigger: GGTCTCCGGGAGTCCCCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGAGGTTAAACGAAGAGGCCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR CCA 72 bp TCTTCGTTTAACCTCTGGACCCAGCGAATGCTTCCCTaGCGGTGCGTGGGGACTCCCGGAGACCTCCGGCCA +
Preference number: 3 (lower is better)
Translates to: SSFNLWTQRMLP*RCVGTPGDLRP
Trigger: TGGCCGGAGGTCTCCGGGAGTCCCCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGAGGTTAAACGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR GCA 72 bp CTAGCCAGGTGCTCGCGGGACTCGCTGAAGTCACGCTaGTCCCTGATGGAGAAGGAGGGACAGAGCAGGAAG +
Preference number: 3 (lower is better)
Translates to: LARCSRDSLKSR*SLMEKEGQSRK
Trigger: CTTCCTGCTCTGTCCCTCCTTCTCCATCAGGGAGCAGCGTGACTTCAGCGAGTCCCGCGAGCACCTGGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
3UTR CCA 72 bp CAGGAAGCCCCCTCCCAAACCTGCGCTGGCTCAGGCTaGAAGGACGTGCTTGTTAACTGTCTAGCCAGGTGC +
Preference number: 3 (lower is better)
Translates to: QEAPSQTCAGSG*KDVLVNCLARC
Trigger: GCACCTGGCTAGACAGTTAACAAGCACGTCCTTCCAGCCTGAGCCAGCGCAGGTTTGGGAGGGGGCTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600480.2
3UTR TCA 72 bp CAATCCAGAGATCATGGTGTCCCCACAACACCCCTGTaGGGTAGGTTGGAAGGTGGCAACGATCTTCACGCC +
Preference number: 3 (lower is better)
Translates to: QSRDHGVPTTPL*GRLEGGNDLHA
Trigger: GGCGTGAAGATCGTTGCCACCTTCCAACCTACCTCACAGGGGTGTTGTGGGGACACCATGATCTCTGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600480.2
3UTR CCA 72 bp ATCATGGTGTCCCCACAACACCCCTGTGAGGTAGGTTaGAAGGTGGCAACGATCTTCACGCCCACTTCACAG +
Preference number: 3 (lower is better)
Translates to: IMVSPQHPCEVG*KVATIFTPTSQ
Trigger: CTGTGAAGTGGGCGTGAAGATCGTTGCCACCTTCCAACCTACCTCACAGGGGTGTTGTGGGGACACCATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
3UTR-3UTR CAA 90 bp GCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCCATTCATTCGATTCATaGAGCCTGCGGAGAGGGAAG +
Preference number: 3 (lower is better)
Translates to: AGGRGPAIQHLVQGMFHLHSFDS*SLRRGK
Trigger: CTTCCCTCTCCGCAGGCTCAATGAATCGAATGAATG...GAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp GACCCAGCGAATGCTTCCCTGGCGGTGCGTGGGGACTCCCGGAGACCTCCGGCCTCCGCGCTGTCTGCCTaGCCCCCGACTCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: DPANASLAVRGDSRRPPASALSA*PPTPQQ
Trigger: CTGCTGGGGAGTCGGGGGGCAGGCAGACAGCGCGGA...GGCCGGAGGTCTCCGGGAGTCCCCACGCACCGCCAGGGAAGCATTCGCTGGGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR TCA 90 bp AAGCCCGGGACACAGGCAAGCGCGAGCGCATGGGAGGCTGAGCCCGGCGGGGCATGCCCGCGGGGATCATaGTCTCCTGCACGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: KPGTQASASAWEAEPGGACPRGS*SPARCR
Trigger: ACGGCACCGTGCAGGAGATCATGATCCCCGCGGGCA...TGCCCCGCCGGGCTCAGCCTCCCATGCGCTCGCGCTTGCCTGTGTCCCGGGCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp CCCCAGCATCACGACAGCGGCACACAGGAACAAGCAGCCGGCGCAGGGAGGCCTGCCCCAGCCCTGGGGTaGGTACTGGTGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PQHHDSGTQEQAAGAGRPAPALG*VLVRRG
Trigger: CCCCCTCCTCACCAGTACCCACCCCAGGGCTGGGGC...AGGCCTCCCTGCGCCGGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCTGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp AAGCCCGGGACACAGGCAAGCGCGAGCGCATGGGAGGCTGAGCCCGGCGGGGCACTGGACCCCCTCCGGTaGCCACTTGCGCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KPGTQASASAWEAEPGGALDPLR*PLALAS
Trigger: AGAAGCAAGCGCAAGTGGCCACCGGAGGGGGTCCAG...TGCCCCGCCGGGCTCAGCCTCCCATGCGCTCGCGCTTGCCTGTGTCCCGGGCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR GCA 90 bp GTCTCAGCGCTCCCCAGCATCACGACAGCGGCACACAGGAACAAGCAGCCGGCGGTCCTGCTGTGGGGGTaGTCCGGGCTGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VSALPSITTAAHRNKQPAVLLWG*SGLLGL
Trigger: CAGCCCCAGCAGCCCGGAGCACCCCCACAGCAGGAC...CGCCGGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCTGGGGAGCGCTGAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR GCA 90 bp TCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCATCACGACAGCGGCACATGCTGCTGTCCCTGCTaGGTGGGCGGCGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SEVPPASLSAPQHHDSGTCCCPC*VGGGWG
Trigger: CCCCCAGCCGCCGCCCACGCAGCAGGGACAGCAGCA...TGTGCCGCTGTCGTGATGCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR GCA 90 bp CCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCATCACGACGCCTGCTGCTGTCCCTaGTGCGTGGGCGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSSSEVPPASLSAPQHHDACCCP*CVGGGW
Trigger: CCAGCCGCCGCCCACGCAGCAGGGACAGCAGCAGGC...GTCGTGATGCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAACTGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp GACCCAGCGAATGCTTCCCTGGCGGTGCGTGGGGACTCCCGGAGACCTCCGGCCATTTTGGCTGCAATCTaGCGGGCCCGCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: DPANASLAVRGDSRRPPAILAAI*RARCTA
Trigger: CGCCGTGCAGCGGGCCCGCCAGATTGCAGCCAAAAT...GGCCGGAGGTCTCCGGGAGTCCCCACGCACCGCCAGGGAAGCATTCGCTGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp CCTCTGGACCCAGCGAATGCTTCCCTGGCGGTGCGTGGGGACTCCCGGAGACCTGGGGTCCCCGTTGGGTaGCAGCTGCCGGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: PLDPANASLAVRGDSRRPGVPVG*QLPGDL
Trigger: GAGATCTCCCGGCAGCTGCCACCCAACGGGGACCCC...AGGTCTCCGGGAGTCCCCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp TGTCTCCGGAGGGCGGTGGCTCCCGGCGCAGCACGACGACATGAACAATCCAGAGCAAGCGCGAGCGCATaGGAGGCTGAGCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: CLRRAVAPGAARRHEQSRASASA*EAEPGG
Trigger: CCCGCCGGGCTCAGCCTCCCATGCGCTCGCGCTTGC...TCTGGATTGTTCATGTCGTCGTGCTGCGCCGGGAGCCACCGCCCTCCGGAGACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR TCA 90 bp CCCGACTCCCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCCAAGTGGCCAGATTGTaGGCGAGGTGGTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: PDSPAVQKSRLRVSALPSQVARL*ARWWRP
Trigger: CGGCCGCCACCACCTCGCTCACAATCTGGCCACTTG...GCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAACTGCTGGGGAGTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR GCA 90 bp ACTCCCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCATCATGCTGCTGTCCCTGCTaGGTGGGCGGCGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TPQQFRSPACESQRSPASCCCPC*VGGGWG
Trigger: CCCCCAGCCGCCGCCCACGCAGCAGGGACAGCAGCA...TGATGCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAACTGCTGGGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp CCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCATCACGACTGCTGTAGTCCGACATaGCGCGGCGGGGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: PSSSEVPPASLSAPQHHDCCSPT*RGGAGP
Trigger: AGGCCCGGCCCCGCCGCGCCATGTCGGACTACAGCA...GTCGTGATGCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAACTGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp TCAGCGCTCCCCAGCATCACGACAGCGGCACACAGGAACAAGCAGCCGGCGCAGAGGGCCTGGGCCACCTaGGCCTGGTCCAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: SALPSITTAAHRNKQPAQRAWAT*AWSNWA
Trigger: TGCCCAGTTGGACCAGGCCCAGGTGGCCCAGGCCCT...CTGCGCCGGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCTGGGGAGCGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp GCGAGTCTCAGCGCTCCCCAGCATCACGACAGCGGCACACAGGAACAAGCAGCCGTCTGGCTGGGAGCCTaGGGGAGCTCCTGGACCCCC +
Preference number: 4 (lower is better)
Translates to: ASLSAPQHHDSGTQEQAAVWLGA*GSSWTP
Trigger: GGGGGTCCAGGAGCTCCCCCAGGCTCCCAGCCAGAC...GGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCTGGGGAGCGCTGAGACTCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp CCTCTGGACCCAGCGAATGCTTCCCTGGCGGTGCGTGGGGACTCCCGGAGACCTCAGCGAATGCTTCCCTaGCGGTGCGTGGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: PLDPANASLAVRGDSRRPQRMLP*RCVGTP
Trigger: GGGAGTCCCCACGCACCGCCAGGGAAGCATTCGCTG...AGGTCTCCGGGAGTCCCCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp CGACAGCGGCACACAGGAACAAGCAGCCGGCGCAGGGAGGCCTCTTCGTTTAACGCAAGCGCGAGCGCATaGGAGGCTGAGCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: RQRHTGTSSRRREASSFNASASA*EAEPGG
Trigger: CCCGCCGGGCTCAGCCTCCCATGCGCTCGCGCTTGC...GTTAAACGAAGAGGCCTCCCTGCGCCGGCTGCTTGTTCCTGTGTGCCGCTGTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp GACCCAGCGAATGCTTCCCTGGCGGTGCGTGGGGACTCCCGGAGACCTCCGGCCCTCCCAAACCTGCGCTaGCTCAGGCTGGAAGGACGT +
Preference number: 4 (lower is better)
Translates to: DPANASLAVRGDSRRPPALPNLR*LRLEGR
Trigger: ACGTCCTTCCAGCCTGAGCCAGCGCAGGTTTGGGAG...GGCCGGAGGTCTCCGGGAGTCCCCACGCACCGCCAGGGAAGCATTCGCTGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp ACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGGTCCTGCTGTGGGGGTaGTCCGGGCTGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TIFTPTSQTSPGHRQARAVLLWG*SGLLGL
Trigger: CAGCCCCAGCAGCCCGGAGCACCCCCACAGCAGGAC...CGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR GCA 90 bp TGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGCCTGCTGCTGTCCCTaGTGCGTGGGCGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: WQRSSRPLHRQARDTGKRACCCP*CVGGGW
Trigger: CCAGCCGCCGCCCACGCAGCAGGGACAGCAGCAGGC...GCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR GCA 90 bp TCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCATGGGACCACACGGCCCCCGCTaGAGGCATCAAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: SRPLHRQARDTGKRERMGPHGPR*RHQGHT
Trigger: GGTGTGCCCTTGATGCCTGCAGCGGGGGCCGTGTGG...TCCCATGCGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR GCA 90 bp CCCCAGCATCACGACAGCGGCACACAGGAACAAGCAGCCGGCGCAGGGAGGCCTTCTGGACCCAGCGAATaGTTCCCTGGCGGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: PQHHDSGTQEQAAGAGRPSGPSE*FPGGAW
Trigger: CCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGA...AGGCCTCCCTGCGCCGGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp GTCTCAGCGCTCCCCAGCATCACGACAGCGGCACACAGGAACAAGCAGCCGGCGAGTTGGGGTCCCCGTTaGGTGGCAGCTGCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: VSALPSITTAAHRNKQPASWGPR*VAAAGR
Trigger: TCTCCCGGCAGCTGCCACCCAACGGGGACCCCAACT...CGCCGGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCTGGGGAGCGCTGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR TCA 90 bp CGAGTCTCAGCGCTCCCCAGCATCACGACAGCGGCACACAGGAACAAGCAGCCGCTGGGGGACCACTCCTaGGGCTCTGGAGGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: RVSALPSITTAAHRNKQPLGDHS*GSGGGR
Trigger: ACGACCTCCTCCAGAGCCTCAGGAGTGGTCCCCCAG...CGGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCTGGGGAGCGCTGAGACTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR TCA 90 bp AGCATCACGACAGCGGCACACAGGAACAAGCAGCCGGCGCAGGGAGGCCTCTTCCAAGTGGCCAGATTGTaGGCGAGGTGGTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: SITTAAHRNKQPAQGGLFQVARL*ARWWRP
Trigger: CGGCCGCCACCACCTCGCTCACAATCTGGCCACTTG...GAAGAGGCCTCCCTGCGCCGGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR GCA 90 bp ACTCCCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCATCAGCGGGGGTCCTCCCGTaGTGTAGTCCGACATGGCGC +
Preference number: 4 (lower is better)
Translates to: TPQQFRSPACESQRSPASAGVLP*CSPTWR
Trigger: GCGCCATGTCGGACTACAGCACGGGAGGACCCCCGC...TGATGCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAACTGCTGGGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp GGCTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGGCCTGCTGCTGTCCCTaGTGCGTGGGCGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLAAGGRGPAIQHLVQGMACCCP*CVGGGW
Trigger: CCAGCCGCCGCCCACGCAGCAGGGACAGCAGCAGGC...CATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR GCA 90 bp CGACAGCGGCACACAGGAACAAGCAGCCGGCGCAGGGAGGCCTCTTCGTTTAACCCACACGGCCCCCGCTaGAGGCATCAAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: RQRHTGTSSRRREASSFNPHGPR*RHQGHT
Trigger: GGTGTGCCCTTGATGCCTGCAGCGGGGGCCGTGTGG...GTTAAACGAAGAGGCCTCCCTGCGCCGGCTGCTTGTTCCTGTGTGCCGCTGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR GCA 90 bp CGTTTAACCTCTGGACCCAGCGAATGCTTCCCTGGCGGTGCGTGGGGACTCCCGATGCTTCCCTGGCGGTaGGTGGGGACTCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: RLTSGPSECFPGGAWGLPMLPWR*VGTPGD
Trigger: GTCTCCGGGAGTCCCCACGCACCGCCAGGGAAGCAT...CGGGAGTCCCCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGAGGTTAAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR GCA 90 bp TGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCTCCGCGCTGTCTGCCTaGCCCCCGACTCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WQRSSRPLHRQARDTGKRSALSA*PPTPQQ
Trigger: CTGCTGGGGAGTCGGGGGGCAGGCAGACAGCGCGGA...GCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp CGTTTAACCTCTGGACCCAGCGAATGCTTCCCTGGCGGTGCGTGGGGACTCCCGTGCACGGTGCCGTTCTaGCCCCCGTTGGCGTTGTCG +
Preference number: 4 (lower is better)
Translates to: RLTSGPSECFPGGAWGLPCTVPF*PPLALS
Trigger: CGACAACGCCAACGGGGGCCAGAACGGCACCGTGCA...CGGGAGTCCCCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGAGGTTAAACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp ACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGTTCCCTGGCGGTGCGTaGGGACTCCCGGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: TIFTPTSQTSPGHRQARAFPGGA*GLPETS
Trigger: GGAGGTCTCCGGGAGTCCCCACGCACCGCCAGGGAA...CGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp GAAGGTGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAGTCTCCGGAGGGCGGTaGCTCCCGGCGCAGCACGAC +
Preference number: 4 (lower is better)
Translates to: EGGNDLHAHFTDKPGTQAVSGGR*LPAQHD
Trigger: GTCGTGCTGCGCCGGGAGCCACCGCCCTCCGGAGAC...TGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCACCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp GGCTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTGCTGTAGTCCGACATaGCGCGGCGGGGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLAAGGRGPAIQHLVQGMCCSPT*RGGAGP
Trigger: AGGCCCGGCCCCGCCGCGCCATGTCGGACTACAGCA...CATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp CCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCATCACGACCTGGACCCCCTCCGGTaGCCACTTGCGCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSSSEVPPASLSAPQHHDLDPLR*PLALAS
Trigger: AGAAGCAAGCGCAAGTGGCCACCGGAGGGGGTCCAG...GTCGTGATGCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAACTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp GTCTCAGCGCTCCCCAGCATCACGACAGCGGCACACAGGAACAAGCAGCCGGCGGGAGGAGGAGGAGGGTaGCAATTCCCACTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: VSALPSITTAAHRNKQPAGGGGG*QFPLAC
Trigger: GCAGGCAAGTGGGAATTGCCACCCTCCTCCTCCTCC...CGCCGGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCTGGGGAGCGCTGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp CCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCATCACGACAGGCAGGATGGACGGTaGCCGGGGGTTGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PSSSEVPPASLSAPQHHDRQDGR*PGVGRR
Trigger: TCTCCTTCCAACCCCCGGCCACCGTCCATCCTGCCT...GTCGTGATGCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAACTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp CGAGTCTCAGCGCTCCCCAGCATCACGACAGCGGCACACAGGAACAAGCAGCCGAGGCAGGATGGACGGTaGCCGGGGGTTGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: RVSALPSITTAAHRNKQPRQDGR*PGVGRR
Trigger: TCTCCTTCCAACCCCCGGCCACCGTCCATCCTGCCT...CGGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCTGGGGAGCGCTGAGACTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp AAGCCCGGGACACAGGCAAGCGCGAGCGCATGGGAGGCTGAGCCCGGCGGGGCATCTTCGTTTAACCTCTaGACCCAGCGAATGCTTCCC +
Preference number: 4 (lower is better)
Translates to: KPGTQASASAWEAEPGGASSFNL*TQRMLP
Trigger: GGGAAGCATTCGCTGGGTCCAGAGGTTAAACGAAGA...TGCCCCGCCGGGCTCAGCCTCCCATGCGCTCGCGCTTGCCTGTGTCCCGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp AAGCCCGGGACACAGGCAAGCGCGAGCGCATGGGAGGCTGAGCCCGGCGGGGCACGTTTTCTTCCCAAGTaGCCAGATTGTGAGCGAGGT +
Preference number: 4 (lower is better)
Translates to: KPGTQASASAWEAEPGGARFLPK*PDCERG
Trigger: ACCTCGCTCACAATCTGGCCACTTGGGAAGAAAACG...TGCCCCGCCGGGCTCAGCCTCCCATGCGCTCGCGCTTGCCTGTGTCCCGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR TCA 90 bp TGTCTCCGGAGGGCGGTGGCTCCCGGCGCAGCACGACGACATGAACAATCCAGACTCCACTCCGGCCAATaGCCACGCCAACAGAATGCC +
Preference number: 4 (lower is better)
Translates to: CLRRAVAPGAARRHEQSRLHSGQ*PRQQNA
Trigger: GGCATTCTGTTGGCGTGGTCATTGGCCGGAGTGGAG...TCTGGATTGTTCATGTCGTCGTGCTGCGCCGGGAGCCACCGCCCTCCGGAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp AGCATCACGACAGCGGCACACAGGAACAAGCAGCCGGCGCAGGGAGGCCTCTTCTTCAGAAGTCCCGCCTaGGAGTCTCAGCGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SITTAAHRNKQPAQGGLFFRSPA*ESQRSP
Trigger: TGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAA...GAAGAGGCCTCCCTGCGCCGGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR GCA 90 bp CCCCAGCATCACGACAGCGGCACACAGGAACAAGCAGCCGGCGCAGGGAGGCCTTCGCTGAAGTCACGCTaGTCCCTGATGGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PQHHDSGTQEQAAGAGRPSLKSR*SLMEKE
Trigger: CTCCTTCTCCATCAGGGAGCAGCGTGACTTCAGCGA...AGGCCTCCCTGCGCCGGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp GGCTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGGGGGTCCCCGTTGGGTaGCAGCTGCCGGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: GLAAGGRGPAIQHLVQGMGVPVG*QLPGDL
Trigger: GAGATCTCCCGGCAGCTGCCACCCAACGGGGACCCC...CATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp GGCTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGAGGGCCTGGGCCACCTaGGCCTGGTCCAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: GLAAGGRGPAIQHLVQGMRAWAT*AWSNWA
Trigger: TGCCCAGTTGGACCAGGCCCAGGTGGCCCAGGCCCT...CATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp GAACAAGCAGCCGGCGCAGGGAGGCCTCTTCGTTTAACCTCTGGACCCAGCGAACCCACTAAGGCAGGATaGACGGTGGCCGGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: EQAAGAGRPLRLTSGPSEPTKAG*TVAGGW
Trigger: CCAACCCCCGGCCACCGTCCATCCTGCCTTAGTGGG...TTCGCTGGGTCCAGAGGTTAAACGAAGAGGCCTCCCTGCGCCGGCTGCTTGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR GCA 90 bp GTTGGAAGGTGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACACGGCGAAAGCGTCCTTaGGGATTCCCGGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: VGRWQRSSRPLHRQARDTRRKRP*GFPGRL
Trigger: GAGGCGGCCCGGGAATCCGCAAGGACGCTTTCGCCG...TGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCACCTTCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp CTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTATCTGGCGGGCCCGCTaGACGGCGTCGGCGAAAGCG +
Preference number: 4 (lower is better)
Translates to: LGCWGKGSCNTTPGPRNVIWRAR*TASAKA
Trigger: CGCTTTCGCCGACGCCGTGCAGCGGGCCCGCCAGAT...AACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR GCA 90 bp TCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCATGGGAGCACTGGCACATCGATaGCTCCGCCAATCCGAGATC +
Preference number: 4 (lower is better)
Translates to: SRPLHRQARDTGKRERMGALAHR*LRQSEI
Trigger: GATCTCGGATTGGCGGAGGCATCGATGTGCCAGTGC...TCCCATGCGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp GCGAGTCTCAGCGCTCCCCAGCATCACGACAGCGGCACACAGGAACAAGCAGCCACCACGCCAACAGAATaGCTGGGCACTGGCACATCG +
Preference number: 4 (lower is better)
Translates to: ASLSAPQHHDSGTQEQAATTPTE*LGTGTS
Trigger: CGATGTGCCAGTGCCCAGGCATTCTGTTGGCGTGGT...GGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCTGGGGAGCGCTGAGACTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp TGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCCGCGGCCGCTGCAGCTaGTTTGCTTGGGTCATGAGG +
Preference number: 4 (lower is better)
Translates to: WQRSSRPLHRQARDTGKRRGRCS*FAWVMR
Trigger: CCTCATGACCCAAGCAAAGCAGCTGCAGCGGCCGCG...GCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp GAAGGTGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAATGCTTCCCTGGCGGTaGGTGGGGACTCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: EGGNDLHAHFTDKPGTQAMLPWR*VGTPGD
Trigger: GTCTCCGGGAGTCCCCACGCACCGCCAGGGAAGCAT...TGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR GCA 90 bp GAACAAGCAGCCGGCGCAGGGAGGCCTCTTCGTTTAACCTCTGGACCCAGCGAATCTGGACCCAGCGAATaGTTCCCTGGCGGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: EQAAGAGRPLRLTSGPSESGPSE*FPGGAW
Trigger: CCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGA...TTCGCTGGGTCCAGAGGTTAAACGAAGAGGCCTCCCTGCGCCGGCTGCTTGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR GCA 90 bp CGAGTCTCAGCGCTCCCCAGCATCACGACAGCGGCACACAGGAACAAGCAGCCGAACTGTCTAGCCAGGTaGTCGCGGGACTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RVSALPSITTAAHRNKQPNCLAR*SRDSLK
Trigger: CTTCAGCGAGTCCCGCGAGCACCTGGCTAGACAGTT...CGGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCTGGGGAGCGCTGAGACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp CTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTGCCCCAGCCCTGGGGTaGGTACTGGTGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LGCWGKGSCNTTPGPRNVAPALG*VLVRRG
Trigger: CCCCCTCCTCACCAGTACCCACCCCAGGGCTGGGGC...AACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp TGTCTCCGGAGGGCGGTGGCTCCCGGCGCAGCACGACGACATGAACAATCCAGATGCAGCTGCTTTGCTTaGGTCATGAGGAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: CLRRAVAPGAARRHEQSRCSCFA*VMRSRR
Trigger: CCGCCTGCTCCTCATGACCCAAGCAAAGCAGCTGCA...TCTGGATTGTTCATGTCGTCGTGCTGCGCCGGGAGCCACCGCCCTCCGGAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp CTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTGTCTGGCTGGGAGCCTaGGGGAGCTCCTGGACCCCC +
Preference number: 4 (lower is better)
Translates to: LGCWGKGSCNTTPGPRNVVWLGA*GSSWTP
Trigger: GGGGGTCCAGGAGCTCCCCCAGGCTCCCAGCCAGAC...AACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp ATTGAGCCTGCGGAGAGGGAAGAGATAGGAATTGGTCACTACGGGGAGGGAAGGGTCTGGCTGGGAGCCTaGGGGAGCTCCTGGACCCCC +
Preference number: 4 (lower is better)
Translates to: IEPAEREEIGIGHYGEGRVWLGA*GSSWTP
Trigger: GGGGGTCCAGGAGCTCCCCCAGGCTCCCAGCCAGAC...CCTTCCCTCCCCGTAGTGACCAATTCCTATCTCTTCCCTCTCCGCAGGCTCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp ACAAGCAGCCGGCGCAGGGAGGCCTCTTCGTTTAACCTCTGGACCCAGCGAATGGGGATCATGATCTCCTaGACGGTGCCGTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TSSRRREASSFNLWTQRMGIMIS*TVPFWP
Trigger: GGGCCAGAACGGCACCGTGCAGGAGATCATGATCCC...CATTCGCTGGGTCCAGAGGTTAAACGAAGAGGCCTCCCTGCGCCGGCTGCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp GGCTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGCGCGGCCGCTGCAGCTaGTTTGCTTGGGTCATGAGG +
Preference number: 4 (lower is better)
Translates to: GLAAGGRGPAIQHLVQGMRGRCS*FAWVMR
Trigger: CCTCATGACCCAAGCAAAGCAGCTGCAGCGGCCGCG...CATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR GCA 90 bp ATTGAGCCTGCGGAGAGGGAAGAGATAGGAATTGGTCACTACGGGGAGGGAAGGGGGGTCCGCGGCCGCTaGAGCTGCTTTGCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: IEPAEREEIGIGHYGEGRGVRGR*SCFAWV
Trigger: GACCCAAGCAAAGCAGCTGCAGCGGCCGCGGACCCC...CCTTCCCTCCCCGTAGTGACCAATTCCTATCTCTTCCCTCTCCGCAGGCTCAAT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp CGACAGCGGCACACAGGAACAAGCAGCCGGCGCAGGGAGGCCTCTTCGTTTAACCAATTCCCACTTGCCTaGTGCTGTCCCTGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: RQRHTGTSSRRREASSFNQFPLA*CCPCCV
Trigger: CACGCAGCAGGGACAGCAGCAGGCAAGTGGGAATTG...GTTAAACGAAGAGGCCTCCCTGCGCCGGCTGCTTGTTCCTGTGTGCCGCTGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR GCA 90 bp ACAAGCAGCCGGCGCAGGGAGGCCTCTTCGTTTAACCTCTGGACCCAGCGAATGTTCAGAAGTCCCGCCTaGGAGTCTCAGCGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: TSSRRREASSFNLWTQRMFRSPA*ESQRSP
Trigger: TGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAA...CATTCGCTGGGTCCAGAGGTTAAACGAAGAGGCCTCCCTGCGCCGGCTGCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR GCA 90 bp ACTCCCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCATCACAGAGCCAGGCCGCCTaGAACACAGTCACTTGGACA +
Preference number: 4 (lower is better)
Translates to: TPQQFRSPACESQRSPASQSQAA*NTVTWT
Trigger: TGTCCAAGTGACTGTGTTGCAGGCGGCCTGGCTCTG...TGATGCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAACTGCTGGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp TGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCAGAATGCCTGGGCACTaGCACATCGATGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: WQRSSRPLHRQARDTGKRRMPGH*HIDASA
Trigger: GGCGGAGGCATCGATGTGCCAGTGCCCAGGCATTCT...GCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp GTTGGAAGGTGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACACAGCGAATGCTTCCCTaGCGGTGCGTGGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: VGRWQRSSRPLHRQARDTQRMLP*RCVGTP
Trigger: GGGAGTCCCCACGCACCGCCAGGGAAGCATTCGCTG...TGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCACCTTCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp CCCGACTCCCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCTCTTCGTTTAACCTCTaGACCCAGCGAATGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PDSPAVQKSRLRVSALPSSSFNL*TQRMLP
Trigger: GGGAAGCATTCGCTGGGTCCAGAGGTTAAACGAAGA...GCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAACTGCTGGGGAGTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp CCCGACTCCCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCACAATCCAGAGATCATaGTGTCCCCACAACACCCCT +
Preference number: 4 (lower is better)
Translates to: PDSPAVQKSRLRVSALPSTIQRS*CPHNTP
Trigger: AGGGGTGTTGTGGGGACACCATGATCTCTGGATTGT...GCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAACTGCTGGGGAGTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR TCA 90 bp CCCCAGCATCACGACAGCGGCACACAGGAACAAGCAGCCGGCGCAGGGAGGCCTTTCTTGCTCTCCGGTTaGTCTCCATCTTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: PQHHDSGTQEQAAGAGRPFLLSG*SPSSNC
Trigger: ACAGTTGGAAGATGGAGATCAACCGGAGAGCAAGAA...AGGCCTCCCTGCGCCGGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR TCA 90 bp GGCTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGCTCCACTCCGGCCAATaGCCACGCCAACAGAATGCC +
Preference number: 4 (lower is better)
Translates to: GLAAGGRGPAIQHLVQGMLHSGQ*PRQQNA
Trigger: GGCATTCTGTTGGCGTGGTCATTGGCCGGAGTGGAG...CATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR GCA 90 bp TGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCTAGCGGGGGTCCTCCCGTaGTGTAGTCCGACATGGCGC +
Preference number: 4 (lower is better)
Translates to: WGKGSCNTTPGPRNVPPLAGVLP*CSPTWR
Trigger: GCGCCATGTCGGACTACAGCACGGGAGGACCCCCGC...TAGAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp GCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACATTTTGGCTGCAATCTaGCGGGCCCGCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: AAGGRGPAIQHLVQGMFHILAAI*RARCTA
Trigger: CGCCGTGCAGCGGGCCCGCCAGATTGCAGCCAAAAT...GTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp CCCGACTCCCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCAAGGCTCCCGTCTGCTaGTTTATGGCTTTCACATTC +
Preference number: 4 (lower is better)
Translates to: PDSPAVQKSRLRVSALPSKAPVC*FMAFTF
Trigger: GAATGTGAAAGCCATAAACCAGCAGACGGGAGCCTT...GCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAACTGCTGGGGAGTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp CTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTAGTTGGGGTCCCCGTTaGGTGGCAGCTGCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LGCWGKGSCNTTPGPRNVSWGPR*VAAAGR
Trigger: TCTCCCGGCAGCTGCCACCCAACGGGGACCCCAACT...AACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp CCTCTTCGTTTAACCTCTGGACCCAGCGAATGCTTCCCTGGCGGTGCGTGGGGAGCGTGGTCAATCTGCTaGGGTGAACCCCGGATGATG +
Preference number: 4 (lower is better)
Translates to: PLRLTSGPSECFPGGAWGAWSIC*GEPRMM
Trigger: CATCATCCGGGGTTCACCCCAGCAGATTGACCACGC...TCCCCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGAGGTTAAACGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp GAAGGTGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCATGGGCCTGGTCCAACTaGGCAGAGAGGACCCTCGAT +
Preference number: 4 (lower is better)
Translates to: EGGNDLHAHFTDKPGTQAWAWSN*AERTLD
Trigger: ATCGAGGGTCCTCTCTGCCCAGTTGGACCAGGCCCA...TGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp GCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCCTGGACCCCCTCCGGTaGCCACTTGCGCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: AGGRGPAIQHLVQGMFHLLDPLR*PLALAS
Trigger: AGAAGCAAGCGCAAGTGGCCACCGGAGGGGGTCCAG...GAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp GAAGGTGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAGGAGGAGGAGGAGGGTaGCAATTCCCACTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: EGGNDLHAHFTDKPGTQAGGGGG*QFPLAC
Trigger: GCAGGCAAGTGGGAATTGCCACCCTCCTCCTCCTCC...TGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp TCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCATGGGACCCTGTGAGGTAGGTTaGAAGGTGGCAACGATCTTC +
Preference number: 4 (lower is better)
Translates to: SRPLHRQARDTGKRERMGPCEVG*KVATIF
Trigger: GAAGATCGTTGCCACCTTCCAACCTACCTCACAGGG...TCCCATGCGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR TCA 90 bp CCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCATCACGACAAGTTGAGAACTGATTaGGTCTCCCTGGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSSSEVPPASLSAPQHHDKLRTD*VSLGSQ
Trigger: CTGGCTTCCCAGGGAGACTCAATCAGTTCTCAACTT...GTCGTGATGCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAACTGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR TCA 90 bp ACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCGCAGCACGACGACATaGACAATCCAGAGATCATGG +
Preference number: 4 (lower is better)
Translates to: TIFTPTSQTSPGHRQARARSTTT*TIQRSW
Trigger: CCATGATCTCTGGATTGTTCATGTCGTCGTGCTGCG...CGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp CCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCATCACGACACGAAGGCTCCCGTCTaGTGGTTTATGGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: PSSSEVPPASLSAPQHHDTKAPV*WFMAFT
Trigger: TGTGAAAGCCATAAACCAGCAGACGGGAGCCTTCGT...GTCGTGATGCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAACTGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp GGCTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTGGCGTGGTCAATCTaGTGGGGTGAACCCCGGATG +
Preference number: 4 (lower is better)
Translates to: GLAAGGRGPAIQHLVQGMLAWSI*WGEPRM
Trigger: CATCCGGGGTTCACCCCAGCAGATTGACCACGCCAA...CATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR GCA 90 bp TTTCAATCTCCTCTTGAACAGATGAAAAGACAACAGACCAGTCCTGGGAGGGGGTGCTGCTGTCCCTGCTaGGTGGGCGGCGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: FQSPLEQMKRQQTSPGRGCCCPC*VGGGWG
Trigger: CCCCCAGCCGCCGCCCACGCAGCAGGGACAGCAGCA...CCCCCTCCCAGGACTGGTCTGTTGTCTTTTCATCTGTTCAAGAGGAGATTGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR GCA 90 bp GAAGGTGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCACAATTCCCACTTGCCTaGTGCTGTCCCTGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: EGGNDLHAHFTDKPGTQAQFPLA*CCPCCV
Trigger: CACGCAGCAGGGACAGCAGCAGGCAAGTGGGAATTG...TGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp GCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACAGAATGCCTGGGCACTaGCACATCGATGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: AAGGRGPAIQHLVQGMFHRMPGH*HIDASA
Trigger: GGCGGAGGCATCGATGTGCCAGTGCCCAGGCATTCT...GTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp TGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCTACCCACTAAGGCAGGATaGACGGTGGCCGGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: WGKGSCNTTPGPRNVPPLPTKAG*TVAGGW
Trigger: CCAACCCCCGGCCACCGTCCATCCTGCCTTAGTGGG...TAGAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp ATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCATTGCGCTGGCTCAGGCTaGAAGGACGTGCTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: IFTPTSQTSPGHRQARAHCAGSG*KDVLVN
Trigger: GTTAACAAGCACGTCCTTCCAGCCTGAGCCAGCGCA...ATGCGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp GCCAGGTGCTCGCGGGACTCGCTGAAGTCACGCTGCTCCCTGATGGAGAAGGAGGGAAGAGATAGGAATTaGTCACTACGGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: ARCSRDSLKSRCSLMEKEGRDRN*SLRGGK
Trigger: CTTCCCTCCCCGTAGTGACCAATTCCTATCTCTTCC...CTCCTTCTCCATCAGGGAGCAGCGTGACTTCAGCGAGTCCCGCGAGCACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp GCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACACCACGCCAACAGAATaGCTGGGCACTGGCACATCG +
Preference number: 4 (lower is better)
Translates to: AAGGRGPAIQHLVQGMFHTTPTE*LGTGTS
Trigger: CGATGTGCCAGTGCCCAGGCATTCTGTTGGCGTGGT...GTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR GCA 90 bp CCTCTTCGTTTAACCTCTGGACCCAGCGAATGCTTCCCTGGCGGTGCGTGGGGACCTGTCCCGTCATCTTaGTTGAACTGTATCCGCACG +
Preference number: 4 (lower is better)
Translates to: PLRLTSGPSECFPGGAWGPVPSS*LNCIRT
Trigger: CGTGCGGATACAGTTCAAGCAAGATGACGGGACAGG...TCCCCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGAGGTTAAACGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp GTTGGAAGGTGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACACCGCTGCAGCTGCTTTaGTTGGGTCATGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VGRWQRSSRPLHRQARDTPLQLL*LGHEEQ
Trigger: CTGCTCCTCATGACCCAAGCAAAGCAGCTGCAGCGG...TGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCACCTTCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp TTTCAATCTCCTCTTGAACAGATGAAAAGACAACAGACCAGTCCTGGGAGGGGGGTCCTGCTGTGGGGGTaGTCCGGGCTGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FQSPLEQMKRQQTSPGRGVLLWG*SGLLGL
Trigger: CAGCCCCAGCAGCCCGGAGCACCCCCACAGCAGGAC...CCCCCTCCCAGGACTGGTCTGTTGTCTTTTCATCTGTTCAAGAGGAGATTGAAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR GCA 90 bp TTGGAAGGTGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGCAGAGCCAGGCCGCCTaGAACACAGTCACTTGGACA +
Preference number: 4 (lower is better)
Translates to: LEGGNDLHAHFTDKPGTQQSQAA*NTVTWT
Trigger: TGTCCAAGTGACTGTGTTGCAGGCGGCCTGGCTCTG...CTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCACCTTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CCA 90 bp GCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACGCGTGGTCAATCTGCTaGGGTGAACCCCGGATGATG +
Preference number: 4 (lower is better)
Translates to: AAGGRGPAIQHLVQGMFHAWSIC*GEPRMM
Trigger: CATCATCCGGGGTTCACCCCAGCAGATTGACCACGC...GTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp CTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTTGGGCCTGGTCCAACTaGGCAGAGAGGACCCTCGAT +
Preference number: 4 (lower is better)
Translates to: LGCWGKGSCNTTPGPRNVWAWSN*AERTLD
Trigger: ATCGAGGGTCCTCTCTGCCCAGTTGGACCAGGCCCA...AACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp CGTTTAACCTCTGGACCCAGCGAATGCTTCCCTGGCGGTGCGTGGGGACTCCCGCTGCAATACAACACCTaGTCCAAGGAATGTTCCACC +
Preference number: 4 (lower is better)
Translates to: RLTSGPSECFPGGAWGLPLQYNT*SKECST
Trigger: GGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAG...CGGGAGTCCCCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGAGGTTAAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp TGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCCCCTGTGAGGTAGGTTaGAAGGTGGCAACGATCTTC +
Preference number: 4 (lower is better)
Translates to: WQRSSRPLHRQARDTGKRPCEVG*KVATIF
Trigger: GAAGATCGTTGCCACCTTCCAACCTACCTCACAGGG...GCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR TCA 90 bp CTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTAGTCACGCTGCTCCCTaGTGGAGAAGGAGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LGCWGKGSCNTTPGPRNVSHAAP*WRRRDR
Trigger: TCTGTCCCTCCTTCTCCATCAGGGAGCAGCGTGACT...AACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR TCA 90 bp GGCGCAGGGAGGCCTCTTCGTTTAACCTCTGGACCCAGCGAATGCTTCCCTGGCATTCATTCGATTCATTaGGCCTGCGGAGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GAGRPLRLTSGPSECFPGIHSIH*ACGEGR
Trigger: TCTTCCCTCTCCGCAGGCTCAATGAATCGAATGAAT...GCCAGGGAAGCATTCGCTGGGTCCAGAGGTTAAACGAAGAGGCCTCCCTGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp TTTCAATCTCCTCTTGAACAGATGAAAAGACAACAGACCAGTCCTGGGAGGGGGCGGCGAAAGCGTCCTTaGGGATTCCCGGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: FQSPLEQMKRQQTSPGRGRRKRP*GFPGRL
Trigger: GAGGCGGCCCGGGAATCCGCAAGGACGCTTTCGCCG...CCCCCTCCCAGGACTGGTCTGTTGTCTTTTCATCTGTTCAAGAGGAGATTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR GCA 90 bp CTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCGCTGCAGCTGCTTTaGTTGGGTCATGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LGCWGKGSCNTTPGPRNVPLQLL*LGHEEQ
Trigger: CTGCTCCTCATGACCCAAGCAAAGCAGCTGCAGCGG...AACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR GCA 90 bp TTTCAATCTCCTCTTGAACAGATGAAAAGACAACAGACCAGTCCTGGGAGGGGGGGGGTCCGCGGCCGCTaGAGCTGCTTTGCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: FQSPLEQMKRQQTSPGRGGVRGR*SCFAWV
Trigger: GACCCAAGCAAAGCAGCTGCAGCGGCCGCGGACCCC...CCCCCTCCCAGGACTGGTCTGTTGTCTTTTCATCTGTTCAAGAGGAGATTGAAA
57% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR GCA 90 bp GCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACTGGGGGAAGGGGTCCTaGAATACAACACCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: AAGGRGPAIQHLVQGMFHWGKGS*NTTPGP
Trigger: TGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCA...GTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp CTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTTGCAGCTGCTTTGCTTaGGTCATGAGGAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LGCWGKGSCNTTPGPRNVCSCFA*VMRSRR
Trigger: CCGCCTGCTCCTCATGACCCAAGCAAAGCAGCTGCA...AACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp CCTCTTCGTTTAACCTCTGGACCCAGCGAATGCTTCCCTGGCGGTGCGTGGGGACGTTTTCTTCCCAAGTaGCCAGATTGTGAGCGAGGT +
Preference number: 4 (lower is better)
Translates to: PLRLTSGPSECFPGGAWGRFLPK*PDCERG
Trigger: ACCTCGCTCACAATCTGGCCACTTGGGAAGAAAACG...TCCCCACGCACCGCCAGGGAAGCATTCGCTGGGTCCAGAGGTTAAACGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR TCA 90 bp GGCTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGGTACTCTTCTGTCATTaGAGTCCTTGGGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: GLAAGGRGPAIQHLVQGMVLFCH*SPWGRM
Trigger: CATCCTCCCCCAAGGACTTCAATGACAGAAGAGTAC...CATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR TCA 90 bp GAAGGTGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAGTACTCTTCTGTCATTaGAGTCCTTGGGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: EGGNDLHAHFTDKPGTQAVLFCH*SPWGRM
Trigger: CATCCTCCCCCAAGGACTTCAATGACAGAAGAGTAC...TGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCACCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR TCA 90 bp TTTCAATCTCCTCTTGAACAGATGAAAAGACAACAGACCAGTCCTGGGAGGGGGTGCCCGCGGGGATCATaGTCTCCTGCACGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: FQSPLEQMKRQQTSPGRGCPRGS*SPARCR
Trigger: ACGGCACCGTGCAGGAGATCATGATCCCCGCGGGCA...CCCCCTCCCAGGACTGGTCTGTTGTCTTTTCATCTGTTCAAGAGGAGATTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR TCA 90 bp TTTCAATCTCCTCTTGAACAGATGAAAAGACAACAGACCAGTCCTGGGAGGGGGCTGGGGGACCACTCCTaGGGCTCTGGAGGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: FQSPLEQMKRQQTSPGRGLGDHS*GSGGGR
Trigger: ACGACCTCCTCCAGAGCCTCAGGAGTGGTCCCCCAG...CCCCCTCCCAGGACTGGTCTGTTGTCTTTTCATCTGTTCAAGAGGAGATTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR GCA 90 bp GCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCCTGTCCCGTCATCTTaGTTGAACTGTATCCGCACG +
Preference number: 4 (lower is better)
Translates to: AAGGRGPAIQHLVQGMFHPVPSS*LNCIRT
Trigger: CGTGCGGATACAGTTCAAGCAAGATGACGGGACAGG...GTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp TTTCAATCTCCTCTTGAACAGATGAAAAGACAACAGACCAGTCCTGGGAGGGGGTGCACGGTGCCGTTCTaGCCCCCGTTGGCGTTGTCG +
Preference number: 4 (lower is better)
Translates to: FQSPLEQMKRQQTSPGRGCTVPF*PPLALS
Trigger: CGACAACGCCAACGGGGGCCAGAACGGCACCGTGCA...CCCCCTCCCAGGACTGGTCTGTTGTCTTTTCATCTGTTCAAGAGGAGATTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR TCA 90 bp GCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCAAGTTGAGAACTGATTaGGTCTCCCTGGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: AGGRGPAIQHLVQGMFHLKLRTD*VSLGSQ
Trigger: CTGGCTTCCCAGGGAGACTCAATCAGTTCTCAACTT...GAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR TCA 90 bp GCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACGTCCAAGTTGAGAACTaGTTGAGTCTCCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: AAGGRGPAIQHLVQGMFHVQVEN*LSLPGK
Trigger: CTTCCCAGGGAGACTCAATCAGTTCTCAACTTGGAC...GTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR TCA 90 bp GGCGCAGGGAGGCCTCTTCGTTTAACCTCTGGACCCAGCGAATGCTTCCCTGGCCTGTACTTTGCAGCCTaGATCCTGTTGGATTTTGTT +
Preference number: 4 (lower is better)
Translates to: GAGRPLRLTSGPSECFPGLYFAA*ILLDFV
Trigger: AACAAAATCCAACAGGATTCAGGCTGCAAAGTACAG...GCCAGGGAAGCATTCGCTGGGTCCAGAGGTTAAACGAAGAGGCCTCCCTGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR TCA 90 bp CACACAGGAACAAGCAGCCGGCGCAGGGAGGCCTCTTCGTTTAACCTCTGGACCCTCCTCTTGAACAGATaGAAAGACAACAGACCAGTC +
Preference number: 4 (lower is better)
Translates to: HTGTSSRRREASSFNLWTLLLNR*KDNRPV
Trigger: GACTGGTCTGTTGTCTTTTCATCTGTTCAAGAGGAG...GGTCCAGAGGTTAAACGAAGAGGCCTCCCTGCGCCGGCTGCTTGTTCCTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp GCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACACGAAGGCTCCCGTCTaGTGGTTTATGGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: AAGGRGPAIQHLVQGMFHTKAPV*WFMAFT
Trigger: TGTGAAAGCCATAAACCAGCAGACGGGAGCCTTCGT...GTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR GCA 90 bp TGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCTATGGGGGAAGGGGTCCTaGAATACAACACCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: WGKGSCNTTPGPRNVPPLWGKGS*NTTPGP
Trigger: TGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCA...TAGAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp GGCTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGCTGCAATACAACACCTaGTCCAAGGAATGTTCCACC +
Preference number: 4 (lower is better)
Translates to: GLAAGGRGPAIQHLVQGMLQYNT*SKECST
Trigger: GGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAG...CATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR TCA 90 bp CTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTATTCATTCGATTCATTaGGCCTGCTGCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LGCWGKGSCNTTPGPRNVIHSIH*ACCCPC
Trigger: GCAGGGACAGCAGCAGGCTCAATGAATCGAATGAAT...AACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398148.7
CDS-3UTR GCA 90 bp TTTCAATCTCCTCTTGAACAGATGAAAAGACAACAGACCAGTCCTGGGAGGGGGGGGATCATGATCTCCTaGACGGTGCCGTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: FQSPLEQMKRQQTSPGRGGIMIS*TVPFWP
Trigger: GGGCCAGAACGGCACCGTGCAGGAGATCATGATCCC...CCCCCTCCCAGGACTGGTCTGTTGTCTTTTCATCTGTTCAAGAGGAGATTGAAA
53% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CCA 90 bp GCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACATCATCTTGGCTTTCTaGACAGATTCTGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: AAGGRGPAIQHLVQGMFHIILAF*TDSGAP
Trigger: AGGAGCCCCAGAATCTGTCCAGAAAGCCAAGATGAT...GTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR TCA 90 bp CTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTTTCTTGCTCTCCGGTTaGTCTCCATCTTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: LGCWGKGSCNTTPGPRNVFLLSG*SPSSNC
Trigger: ACAGTTGGAAGATGGAGATCAACCGGAGAGCAAGAA...AACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR GCA 90 bp TTTCAATCTCCTCTTGAACAGATGAAAAGACAACAGACCAGTCCTGGGAGGGGGGCACTGGCACATCGATaGCTCCGCCAATCCGAGATC +
Preference number: 4 (lower is better)
Translates to: FQSPLEQMKRQQTSPGRGALAHR*LRQSEI
Trigger: GATCTCGGATTGGCGGAGGCATCGATGTGCCAGTGC...CCCCCTCCCAGGACTGGTCTGTTGTCTTTTCATCTGTTCAAGAGGAGATTGAAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR TCA 90 bp CACACAGGAACAAGCAGCCGGCGCAGGGAGGCCTCTTCGTTTAACCTCTGGACCGTTTCAATCTCCTCTTaGACAGATGAAAAGACAACA +
Preference number: 4 (lower is better)
Translates to: HTGTSSRRREASSFNLWTVSISS*TDEKTT
Trigger: TGTTGTCTTTTCATCTGTTCAAGAGGAGATTGAAAC...GGTCCAGAGGTTAAACGAAGAGGCCTCCCTGCGCCGGCTGCTTGTTCCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp TGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCTATTTTCCTCGATAAGCTaGTTGGCGTGGTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: WGKGSCNTTPGPRNVPPLFSSIS*LAWSIC
Trigger: GCAGATTGACCACGCCAAGCAGCTTATCGAGGAAAA...TAGAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR GCA 90 bp AACATCTATAAAGAACAAACATCCGCTTCAAAACTACAGGGAGGGAAGGAAAGGGCCCCCTCCCAAACCTaGGCTGGCTCAGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: NIYKEQTSASKLQGGKERAPSQT*AGSGWK
Trigger: CTTCCAGCCTGAGCCAGCGCAGGTTTGGGAGGGGGC...CCTTTCCTTCCCTCCCTGTAGTTTTGAAGCGGATGTTTGTTCTTTATAGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CCA 90 bp TGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCTAAAGGCTCCCGTCTGCTaGTTTATGGCTTTCACATTC +
Preference number: 4 (lower is better)
Translates to: WGKGSCNTTPGPRNVPPLKAPVC*FMAFTF
Trigger: GAATGTGAAAGCCATAAACCAGCAGACGGGAGCCTT...TAGAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR GCA 90 bp AACATCTATAAAGAACAAACATCCGCTTCAAAACTACAGGGAGGGAAGGAAAGGTTGGCGTGGTCAATCTaGTGGGGTGAACCCCGGATG +
Preference number: 4 (lower is better)
Translates to: NIYKEQTSASKLQGGKERLAWSI*WGEPRM
Trigger: CATCCGGGGTTCACCCCAGCAGATTGACCACGCCAA...CCTTTCCTTCCCTCCCTGTAGTTTTGAAGCGGATGTTTGTTCTTTATAGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR GCA 90 bp TTTCAATCTCCTCTTGAACAGATGAAAAGACAACAGACCAGTCCTGGGAGGGGGTTTTCCTCGATAAGCTaGTTGGCGTGGTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: FQSPLEQMKRQQTSPGRGFSSIS*LAWSIC
Trigger: GCAGATTGACCACGCCAAGCAGCTTATCGAGGAAAA...CCCCCTCCCAGGACTGGTCTGTTGTCTTTTCATCTGTTCAAGAGGAGATTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR TCA 90 bp TGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCTAGTTTCAATCTCCTCTTaGACAGATGAAAAGACAACA +
Preference number: 4 (lower is better)
Translates to: WGKGSCNTTPGPRNVPPLVSISS*TDEKTT
Trigger: TGTTGTCTTTTCATCTGTTCAAGAGGAGATTGAAAC...TAGAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR TCA 90 bp TTTCAATCTCCTCTTGAACAGATGAAAAGACAACAGACCAGTCCTGGGAGGGGGCTGTACTTTGCAGCCTaGATCCTGTTGGATTTTGTT +
Preference number: 4 (lower is better)
Translates to: FQSPLEQMKRQQTSPGRGLYFAA*ILLDFV
Trigger: AACAAAATCCAACAGGATTCAGGCTGCAAAGTACAG...CCCCCTCCCAGGACTGGTCTGTTGTCTTTTCATCTGTTCAAGAGGAGATTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS GCA 90 bp CTGCAATCTGGCGGGCCCGCTGCACGGCGTCGGCGAAAGCGTCCTTaGGGATTCCCGGGCCGCCTCCGCCGGGTGGCTGAGAGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: LQSGGPAARRRRKRP*GFPGRLRRVAERGP
Trigger: GGGGCCCCTCTCAGCCACCCGGCGGAGGCGGCCCGGGAATCCGCAAGGACGCTTTCGCCGACGCCGTGCAGCGGGCCCGCCAGATTGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398148.7
ENST00000600480.2
ENST00000619396.4
CDS GCA 90 bp GGAGGAGGAGGAGGGTGGCAATTCCCACTTGCCTGCTGCTGTCCCTaGTGCGTGGGCGGCGGCTGGGGGCCGCCAGGACCTGGGGTCTGT +
Preference number: 5 (lower is better)
Translates to: GGGGGWQFPLACCCP*CVGGGWGPPGPGVC
Trigger: ACAGACCCCAGGTCCTGGCGGCCCCCAGCCGCCGCCCACGCAGCAGGGACAGCAGCAGGCAAGTGGGAATTGCCACCCTCCTCCTCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS TCA 90 bp TCCTCCTCGGGCACTTGGCACTGCCTGCCCCGGGTCAGTGGGAGCTaGGCCCGGCACCACGGTCCCCAGCCTGCTCCAGTGCCTCATGGA +
Preference number: 5 (lower is better)
Translates to: SSSGTWHCLPRVSGS*ARHHGPQPAPVPHG
Trigger: TCCATGAGGCACTGGAGCAGGCTGGGGACCGTGGTGCCGGGCTCAGCTCCCACTGACCCGGGGCAGGCAGTGCCAAGTGCCCGAGGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597704.1
CDS GCA 90 bp AAAGCAAAGACTGGCTTAGCTCCTCCTCGGGCACTTGGCACTGCCTaGCCCGGGTCAGTGGGAGCTGAGCCCGGCACCACGGTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: KAKTGLAPPRALGTA*PGSVGAEPGTTVPS
Trigger: GCTGGGGACCGTGGTGCCGGGCTCAGCTCCCACTGACCCGGGGCAGGCAGTGCCAAGTGCCCGAGGAGGAGCTAAGCCAGTCTTTGCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597704.1
CDS-3UTR CAA 90 bp GAAGGTGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAAGTTGGGGTCCCCGTaGGGTGGCAGCTGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: EGGNDLHAHFTDKPGTQAKLGSP*GGSCRE
Trigger: CTCCCGGCAGCTGCCACCCAACGGGGACCCCAACTT...TGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CAA 90 bp TTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCATGGGTTGAAGGGCCCAGGATaGAAGGGCCCCATTGGGCCA +
Preference number: 5 (lower is better)
Translates to: FTPTSQTSPGHRQARAHGLKGPG*KGPIGP
Trigger: TGGCCCAATGGGGCCCTTCAATCCTGGGCCCTTCAA...CCCATGCGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CAA 90 bp ATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCATCCGGGTGGCCCCTGGTaGAAGGGCCCAGGATTGAAG +
Preference number: 5 (lower is better)
Translates to: IFTPTSQTSPGHRQARAHPGGPW*KGPGLK
Trigger: CTTCAATCCTGGGCCCTTCAACCAGGGGCCACCCGG...ATGCGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CAA 90 bp GCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACTCGGCGAAAGCGTCCTaGCGGATTCCCGGGCCGCCT +
Preference number: 5 (lower is better)
Translates to: AAGGRGPAIQHLVQGMFHSAKAS*RIPGPP
Trigger: AGGCGGCCCGGGAATCCGCAAGGACGCTTTCGCCGA...GTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CAA 90 bp GCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCTCGGCGAAAGCGTCCTaGCGGATTCCCGGGCCGCCT +
Preference number: 5 (lower is better)
Translates to: AGGRGPAIQHLVQGMFHLSAKAS*RIPGPP
Trigger: AGGCGGCCCGGGAATCCGCAAGGACGCTTTCGCCGA...GAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CAA 90 bp GCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCAAGTTGGGGTCCCCGTaGGGTGGCAGCTGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: AGGRGPAIQHLVQGMFHLKLGSP*GGSCRE
Trigger: CTCCCGGCAGCTGCCACCCAACGGGGACCCCAACTT...GAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS GCA 90 bp GGAGGAAGCCATAGGGTGCGGAGACCACCCTATCACTACAGTGACTaGCACGACGCTCCCCTCCCACAGCCCTTCAGACAAGGGGTACGA +
Preference number: 5 (lower is better)
Translates to: GGSHRVRRPPYHYSD*HDAPLPQPFRQGVR
Trigger: TCGTACCCCTTGTCTGAAGGGCTGTGGGAGGGGAGCGTCGTGGCAGTCACTGTAGTGATAGGGTGGTCTCCGCACCCTATGGCTTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597704.1
CDS CCA 90 bp GCCCCCAGTCAGAGCCCTCCCAAGTCAGCAGAAAGGCCAGTCTGCTaGCCAACAGACAAGAAAGCAGTGTGGGCCCCACCATGGCTTACC +
Preference number: 5 (lower is better)
Translates to: APSQSPPKSAERPVC*PTDKKAVWAPPWLT
Trigger: GGTAAGCCATGGTGGGGCCCACACTGCTTTCTTGTCTGTTGGCCAGCAGACTGGCCTTTCTGCTGACTTGGGAGGGCTCTGACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597704.1
CDS-3UTR CAA 90 bp CGAGTCTCAGCGCTCCCCAGCATCACGACAGCGGCACACAGGAACAAGCAGCCGATGAACAACTTGAAGTaGGGGTCCCCGTTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: RVSALPSITTAAHRNKQPMNNLK*GSPLGG
Trigger: GCCACCCAACGGGGACCCCAACTTCAAGTTGTTCAT...CGGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCTGGGGAGCGCTGAGACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CAA 90 bp GCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCCCGGGTGGCCCCTGGTaGAAGGGCCCAGGATTGAAG +
Preference number: 5 (lower is better)
Translates to: AGGRGPAIQHLVQGMFHLPGGPW*KGPGLK
Trigger: CTTCAATCCTGGGCCCTTCAACCAGGGGCCACCCGG...GAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CAA 90 bp TCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCATGGGAGGTGGCCACTTGCGCTaGCTTCTTGTAGTACTCCTC +
Preference number: 5 (lower is better)
Translates to: SRPLHRQARDTGKRERMGGGHLR*LLVVLL
Trigger: GAGGAGTACTACAAGAAGCAAGCGCAAGTGGCCACC...TCCCATGCGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS-3UTR CAA 90 bp CCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCATCACGACGGTGGCCACTTGCGCTaGCTTCTTGTAGTACTCCTC +
Preference number: 5 (lower is better)
Translates to: PSSSEVPPASLSAPQHHDGGHLR*LLVVLL
Trigger: GAGGAGTACTACAAGAAGCAAGCGCAAGTGGCCACC...GTCGTGATGCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAACTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594496.5
ENST00000600480.2
CDS GCA 90 bp TGTGCCCCCAGTCAGAGCCCTCCCAAGTCAGCAGAAAGGCCAGTCTaGTGGCCAACAGACAAGAAAGCAGTGTGGGCCCCACCATGGCTT +
Preference number: 5 (lower is better)
Translates to: CAPSQSPPKSAERPV*WPTDKKAVWAPPWL
Trigger: AAGCCATGGTGGGGCCCACACTGCTTTCTTGTCTGTTGGCCAGCAGACTGGCCTTTCTGCTGACTTGGGAGGGCTCTGACTGGGGGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597704.1
CDS-3UTR CAA 90 bp ACTCCCCAGCAGTTCAGAAGTCCCGCCTGCGAGTCTCAGCGCTCCCCAGCATCAGTCCCGTCATCTTGCTaGAACTGTATCCGCACGCCA +
Preference number: 5 (lower is better)
Translates to: TPQQFRSPACESQRSPASVPSSC*NCIRTP
Trigger: TGGCGTGCGGATACAGTTCAAGCAAGATGACGGGAC...TGATGCTGGGGAGCGCTGAGACTCGCAGGCGGGACTTCTGAACTGCTGGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CAA 90 bp TTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCATGGGCACCATCTCACAGGCTaGCTGCACTTTGTAAGGATC +
Preference number: 5 (lower is better)
Translates to: FTPTSQTSPGHRQARAHGHHLTG*LHFVRI
Trigger: GATCCTTACAAAGTGCAGCAAGCCTGTGAGATGGTG...CCCATGCGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CAA 90 bp ATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCATCCCTGTCCCGTCATCTaGCTTGAACTGTATCCGCAC +
Preference number: 5 (lower is better)
Translates to: IFTPTSQTSPGHRQARAHPCPVI*LELYPH
Trigger: GTGCGGATACAGTTCAAGCAAGATGACGGGACAGGG...ATGCGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CAA 90 bp GCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACTTGAAGGGCCCAGGATaGAAGGGCCCCATTGGGCCA +
Preference number: 5 (lower is better)
Translates to: AAGGRGPAIQHLVQGMFHLKGPG*KGPIGP
Trigger: TGGCCCAATGGGGCCCTTCAATCCTGGGCCCTTCAA...GTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CAA 90 bp GCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCCTGCAGCTGCTTTGCTaGGGTCATGAGGAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: AGGRGPAIQHLVQGMFHLLQLLC*GHEEQA
Trigger: CGCCTGCTCCTCATGACCCAAGCAAAGCAGCTGCAG...GAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CAA 90 bp GCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTGCAGCTGCTTTGCTaGGGTCATGAGGAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: AAGGRGPAIQHLVQGMFHLQLLC*GHEEQA
Trigger: CGCCTGCTCCTCATGACCCAAGCAAAGCAGCTGCAG...GTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CAA 90 bp GGCTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGCTGTCATTGAAGTCCTaGGGGGAGGATGGATGGGTC +
Preference number: 5 (lower is better)
Translates to: GLAAGGRGPAIQHLVQGMLSLKS*GEDGWV
Trigger: GACCCATCCATCCTCCCCCAAGGACTTCAATGACAG...CATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CAA 90 bp GGCTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGGTCCCGTCATCTTGCTaGAACTGTATCCGCACGCCA +
Preference number: 5 (lower is better)
Translates to: GLAAGGRGPAIQHLVQGMVPSSC*NCIRTP
Trigger: TGGCGTGCGGATACAGTTCAAGCAAGATGACGGGAC...CATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CAA 90 bp GATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAAGCGCGAGCGCACATTCATTCGATTCATaGAGCCTGCGGAGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: DLHAHFTDKPGTQASASAHSFDS*SLRRGK
Trigger: CTTCCCTCTCCGCAGGCTCAATGAATCGAATGAATG...TGCGCTCGCGCTTGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS TCA 90 bp CAATTTCAGGGTTCCTGGGATCCCTCAAACGTATGGGCCCCAGAATaGAGCACCAGGGGCCTCTGTAAAGAGCTGCCACCTCCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: QFQGSWDPSNVWAPE*STRGLCKELPPPQC
Trigger: GCACTGAGGAGGTGGCAGCTCTTTACAGAGGCCCCTGGTGCTTCATTCTGGGGCCCATACGTTTGAGGGATCCCAGGAACCCTGAAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597704.1
CDS GCA 90 bp CAGCTCCTGACTCCTGAAAACCTCAACCCTCTGAAGCCACATATCTaGCACCAGACCCCCTGGACTTACAGTCTCCCTGGGAAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: QLLTPENLNPLKPHI*HQTPWTYSLPGKPA
Trigger: AGCTGGCTTCCCAGGGAGACTGTAAGTCCAGGGGGTCTGGTGGCAGATATGTGGCTTCAGAGGGTTGAGGTTTTCAGGAGTCAGGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597704.1
CDS-3UTR CAA 90 bp GCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACGGTGGCCACTTGCGCTaGCTTCTTGTAGTACTCCTC +
Preference number: 5 (lower is better)
Translates to: AAGGRGPAIQHLVQGMFHGGHLR*LLVVLL
Trigger: GAGGAGTACTACAAGAAGCAAGCGCAAGTGGCCACC...GTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CAA 90 bp GAAGGTGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCACTTCTTGCTCTCCGGTaGATCTCCATCTTCCAACTG +
Preference number: 5 (lower is better)
Translates to: EGGNDLHAHFTDKPGTQALLALR*ISIFQL
Trigger: CAGTTGGAAGATGGAGATCAACCGGAGAGCAAGAAG...TGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CAA 90 bp GGCTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGCATTCATTCGATTCATaGAGCCTGCTGCTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: GLAAGGRGPAIQHLVQGMHSFDS*SLLLSL
Trigger: CAGGGACAGCAGCAGGCTCAATGAATCGAATGAATG...CATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398148.7
CDS-3UTR CAA 90 bp GTCTCAGCGCTCCCCAGCATCACGACAGCGGCACACAGGAACAAGCAGCCGGCGGCAGACGGGGAGGTTTaGTTATCATTTATTTGTGAA +
Preference number: 5 (lower is better)
Translates to: VSALPSITTAAHRNKQPAADGEV*LSFICE
Trigger: TTCACAAATAAATGATAACAAAACCTCCCCGTCTGC...CGCCGGCTGCTTGTTCCTGTGTGCCGCTGTCGTGATGCTGGGGAGCGCTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS CCA 90 bp AAGTTGAGAACTGATTGCTGTAGAGAGAAAACCCAAAGCAAAGACTaGCTTAGCTCCTCCTCGGGCACTTGGCACTGCCTGCCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: KLRTDCCREKTQSKD*LSSSSGTWHCLPRV
Trigger: GACCCGGGGCAGGCAGTGCCAAGTGCCCGAGGAGGAGCTAAGCCAGTCTTTGCTTTGGGTTTTCTCTCTACAGCAATCAGTTCTCAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597704.1
CDS-3UTR CAA 90 bp GCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCACCATCTCACAGGCTaGCTGCACTTTGTAAGGATC +
Preference number: 5 (lower is better)
Translates to: AAGGRGPAIQHLVQGMFHHHLTG*LHFVRI
Trigger: GATCCTTACAAAGTGCAGCAAGCCTGTGAGATGGTG...GTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CAA 90 bp TGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCTACCCTGTCCCGTCATCTaGCTTGAACTGTATCCGCAC +
Preference number: 5 (lower is better)
Translates to: WGKGSCNTTPGPRNVPPLPCPVI*LELYPH
Trigger: GTGCGGATACAGTTCAAGCAAGATGACGGGACAGGG...TAGAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CAA 90 bp TGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCTACTTCTTGCTCTCCGGTaGATCTCCATCTTCCAACTG +
Preference number: 5 (lower is better)
Translates to: WGKGSCNTTPGPRNVPPLLLALR*ISIFQL
Trigger: CAGTTGGAAGATGGAGATCAACCGGAGAGCAAGAAG...TAGAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CAA 90 bp TTTCAATCTCCTCTTGAACAGATGAAAAGACAACAGACCAGTCCTGGGAGGGGGATGAACAACTTGAAGTaGGGGTCCCCGTTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: FQSPLEQMKRQQTSPGRGMNNLK*GSPLGG
Trigger: GCCACCCAACGGGGACCCCAACTTCAAGTTGTTCAT...CCCCCTCCCAGGACTGGTCTGTTGTCTTTTCATCTGTTCAAGAGGAGATTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CAA 90 bp GGCTTGGCTGCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGGAATCCTGTTGGATTTaGTTAATTTGTTCACCTCCT +
Preference number: 5 (lower is better)
Translates to: GLAAGGRGPAIQHLVQGMESCWI*LICSPP
Trigger: AGGAGGTGAACAAATTAACAAAATCCAACAGGATTC...CATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGCAGCCAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CAA 90 bp GAAGGTGGCAACGATCTTCACGCCCACTTCACAGACAAGCCCGGGACACAGGCAGAATCCTGTTGGATTTaGTTAATTTGTTCACCTCCT +
Preference number: 5 (lower is better)
Translates to: EGGNDLHAHFTDKPGTQAESCWI*LICSPP
Trigger: AGGAGGTGAACAAATTAACAAAATCCAACAGGATTC...TGCCTGTGTCCCGGGCTTGTCTGTGAAGTGGGCGTGAAGATCGTTGCCACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600480.2
CDS-3UTR CAA 90 bp GCTGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCTTGGATTTTGTTAATTaGTTCACCTCCTCTGCCAAT +
Preference number: 5 (lower is better)
Translates to: AGGRGPAIQHLVQGMFHLLDFVN*FTSSAN
Trigger: ATTGGCAGAGGAGGTGAACAAATTAACAAAATCCAA...GAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS-3UTR CAA 90 bp TGGGGGAAGGGGTCCTGCAATACAACACCTGGTCCAAGGAATGTTCCACCTCTATTGGATTTTGTTAATTaGTTCACCTCCTCTGCCAAT +
Preference number: 5 (lower is better)
Translates to: WGKGSCNTTPGPRNVPPLLDFVN*FTSSAN
Trigger: ATTGGCAGAGGAGGTGAACAAATTAACAAAATCCAA...TAGAGGTGGAACATTCCTTGGACCAGGTGTTGTATTGCAGGACCCCTTCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398148.7
ENST00000600480.2
CDS CCA 72 bp CTCCTCGGGCACTTGGCACTGCCTGCCCCGGGTCAGTaGGAGCTGAGCCCGGCACCACGGTCCCCAGCCTGC +
Preference number: 6 (lower is better)
Translates to: LLGHLALPAPGQ*ELSPAPRSPAC
Trigger: GCAGGCTGGGGACCGTGGTGCCGGGCTCAGCTCCCACTGACCCGGGGCAGGCAGTGCCAAGTGCCCGAGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597704.1
CDS TCA 72 bp GGCACTTGGCACTGCCTGCCCCGGGTCAGTGGGAGCTaGGCCCGGCACCACGGTCCCCAGCCTGCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: GTWHCLPRVSGS*ARHHGPQPAPV
Trigger: CACTGGAGCAGGCTGGGGACCGTGGTGCCGGGCTCAGCTCCCACTGACCCGGGGCAGGCAGTGCCAAGTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597704.1
CDS GCA 72 bp CAGTGGGAGCTGAGCCCGGCACCACGGTCCCCAGCCTaGTCCAGTGCCTCATGGATGCTGTGGATTCCTCCC +
Preference number: 6 (lower is better)
Translates to: QWELSPAPRSPA*SSASWMLWIPP
Trigger: GGGAGGAATCCACAGCATCCATGAGGCACTGGAGCAGGCTGGGGACCGTGGTGCCGGGCTCAGCTCCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597704.1
CDS GCA 72 bp CATAGGGTGCGGAGACCACCCTATCACTACAGTGACTaGCACGACGCTCCCCTCCCACAGCCCTTCAGACAA +
Preference number: 6 (lower is better)
Translates to: HRVRRPPYHYSD*HDAPLPQPFRQ
Trigger: TTGTCTGAAGGGCTGTGGGAGGGGAGCGTCGTGGCAGTCACTGTAGTGATAGGGTGGTCTCCGCACCCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597704.1
CDS CCA 72 bp CAGAGCCCTCCCAAGTCAGCAGAAAGGCCAGTCTGCTaGCCAACAGACAAGAAAGCAGTGTGGGCCCCACCA +
Preference number: 6 (lower is better)
Translates to: QSPPKSAERPVC*PTDKKAVWAPP
Trigger: TGGTGGGGCCCACACTGCTTTCTTGTCTGTTGGCCAGCAGACTGGCCTTTCTGCTGACTTGGGAGGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597704.1
CDS CCA 72 bp CCTCTGCCTCATTCCCGTCTGAGCACTCTGGTCAACTaGCACTGGGGGATAAAACCTGAGAGATGTGCCCCC +
Preference number: 6 (lower is better)
Translates to: PLPHSRLSTLVN*HWGIKPERCAP
Trigger: GGGGGCACATCTCTCAGGTTTTATCCCCCAGTGCCAGTTGACCAGAGTGCTCAGACGGGAATGAGGCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597704.1
CDS GCA 72 bp ACTCCTGAAAACCTCAACCCTCTGAAGCCACATATCTaGCACCAGACCCCCTGGACTTACAGTCTCCCTGGG +
Preference number: 6 (lower is better)
Translates to: TPENLNPLKPHI*HQTPWTYSLPG
Trigger: CCCAGGGAGACTGTAAGTCCAGGGGGTCTGGTGGCAGATATGTGGCTTCAGAGGGTTGAGGTTTTCAGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597704.1