RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KHNYN (Homo sapiens)

Ensembl gene IDs: ENSG00000100441

Ensembl transcript IDs: ENST00000251343.9, ENST00000553935.6, ENST00000554268.1, ENST00000556255.1, ENST00000556510.1, ENST00000556842.5

Found 862 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCCCTGGGCCGCCGAGCCTTCATCCCTCTCCCCAGCGCTGTGGTaGAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGG +
Preference number: 1 (lower is better)
Translates to: LPWAAEPSSLSPALW*KLSLGDSVPSCCWR
Trigger: CCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGAAGGCTCGGCGGCCCAGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 90 bp ACCTTCCCTCTTTCCTGCTCTAGGGGTTGTGCTGGGCCGTGGGGGTaGTGCCATGGGCCACATGCTGCTGCCCTTTCGCCTGGGCCTGGG +
Preference number: 1 (lower is better)
Translates to: TFPLSCSRGCAGPWG*CHGPHAAALSPGPG
Trigger: CCCAGGCCCAGGCGAAAGGGCAGCAGCATGTGGCCCATGGCACCACCCCCACGGCCCAGCACAACCCCTAGAGCAGGAAAGAGGGAAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 90 bp GAGTGGCTCCATCCTCCGCCACTAATGCTGAGTTTGCCCAGACCTTaGGTGCTGCCCTGGGCCGCCGAGCCTTCATCCCTCTCCCCAGCG +
Preference number: 1 (lower is better)
Translates to: EWLHPPPLMLSLPRP*VLPWAAEPSSLSPA
Trigger: CGCTGGGGAGAGGGATGAAGGCTCGGCGGCCCAGGGCAGCACCCAAGGTCTGGGCAAACTCAGCATTAGTGGCGGAGGATGGAGCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR GCA 90 bp CCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTaGCATCATGCTGCTGGAGGGCCAGAAGGTGATCCCACAGCGAAC +
Preference number: 1 (lower is better)
Translates to: PSPQRCGASCLWATA*HHAAGGPEGDPTAN
Trigger: GTTCGCTGTGGGATCACCTTCTGGCCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 90 bp GGGAAGCTGCAGCCAGGCTTCCTGGAGATTCTACACGCCAGGTGGTaGTGCGCTCAGGTGAGAAACGGGCCTGGGTATCAGACAGGGTTG +
Preference number: 1 (lower is better)
Translates to: GKLQPGFLEILHARW*CAQVRNGPGYQTGL
Trigger: CAACCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCTGGCGTGTAGAATCTCCAGGAAGCCTGGCTGCAGCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 90 bp AATGGGAAGCTGCAGCCAGGCTTCCTGGAGATTCTACACGCCAGGTaGTGGTGCGCTCAGGTGAGAAACGGGCCTGGGTATCAGACAGGG +
Preference number: 1 (lower is better)
Translates to: NGKLQPGFLEILHAR*WCAQVRNGPGYQTG
Trigger: CCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCTGGCGTGTAGAATCTCCAGGAAGCCTGGCTGCAGCTTCCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 90 bp TCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGCCAGAAGGTaGTCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCC +
Preference number: 1 (lower is better)
Translates to: SLGDSVPSCCWRARR*SHSEHWPLATSIPS
Trigger: GGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGATCACCTTCTGGCCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR GCA 90 bp AAGCTGCAGCCAGGCTTCCTGGAGATTCTACACGCCAGGTGGTGGTaGGCTCAGGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAA +
Preference number: 1 (lower is better)
Translates to: KLQPGFLEILHARWW*AQVRNGPGYQTGLE
Trigger: TTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCTGGCGTGTAGAATCTCCAGGAAGCCTGGCTGCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 90 bp GCTGCTGGAGGGCCAGAAGGTGATCCCACAGCGAACACTGGCCACTaGCTACCAGTATTCCTTCCCAGAGCTAGGGGCTGCCTTAAAGGA +
Preference number: 1 (lower is better)
Translates to: AAGGPEGDPTANTGH*LPVFLPRARGCLKG
Trigger: TCCTTTAAGGCAGCCCCTAGCTCTGGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGATCACCTTCTGGCCCTCCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 90 bp AATGGCTCTGTCTCCAAATGGGGAGATCCTAAGGGCCAGAGAAGGTaGGGCCAAGGGGAGCCTCCACTACAGAGAGCCAGGCAGGACCAA +
Preference number: 1 (lower is better)
Translates to: NGSVSKWGDPKGQRR*GQGEPPLQRARQDQ
Trigger: TTGGTCCTGCCTGGCTCTCTGTAGTGGAGGCTCCCCTTGGCCTCACCTTCTCTGGCCCTTAGGATCTCCCCATTTGGAGACAGAGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 90 bp GATTCTACACGCCAGGTGGTGGTGCGCTCAGGTGAGAAACGGGCCTaGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGGGAAGT +
Preference number: 1 (lower is better)
Translates to: DSTRQVVVRSGEKRA*VSDRVGMSSLGWGS
Trigger: ACTTCCCCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCTGGCGTGTAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 90 bp CAGGCTTCCTGGAGATTCTACACGCCAGGTGGTGGTGCGCTCAGGTaGGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCT +
Preference number: 1 (lower is better)
Translates to: QASWRFYTPGGGALR*ETGLGIRQGWNVFS
Trigger: AGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCTGGCGTGTAGAATCTCCAGGAAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 90 bp CCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTaGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAG +
Preference number: 1 (lower is better)
Translates to: PKVASLIQSTNSGCL*IRVSSRGTLTERAE
Trigger: CTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
3UTR CCA 90 bp CCAAGTCTCCCTCTGCCTTCTTCACTAGCTCACTCCACCCTATCGTaGCCCAGTCCACATAACACTGTGCCAGGGCCTAGCATCTCCTTC +
Preference number: 1 (lower is better)
Translates to: PSLPLPSSLAHSTLS*PSPHNTVPGPSISF
Trigger: GAAGGAGATGCTAGGCCCTGGCACAGTGTTATGTGGACTGGGCCACGATAGGGTGGAGTGAGCTAGTGAAGAAGGCAGAGGGAGACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR GCA 90 bp ACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTaGCTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGG +
Preference number: 1 (lower is better)
Translates to: TCPKVASLIQSTNSG*LWIRVSSRGTLTER
Trigger: CCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
3UTR CCA 90 bp AGAGCTAGGGGCTGCCTTAAAGGAAATTGTAGCCTAAGTAGGTCGTaGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGC +
Preference number: 1 (lower is better)
Translates to: RARGCLKGNCSLSRS*QGPEACSSQASRLG
Trigger: GCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGACCTACTTAGGCTACAATTTCCTTTAAGGCAGCCCCTAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 90 bp AGCCCAGGAGGGGACTTTGACTTTTTCTCCAACCTCGTAACCAAATaGGAAGCTGCAGCCAGGCTTCCTGGAGATTCTACACGCCAGGTG +
Preference number: 1 (lower is better)
Translates to: SPGGDFDFFSNLVTK*EAAARLPGDSTRQV
Trigger: CACCTGGCGTGTAGAATCTCCAGGAAGCCTGGCTGCAGCTTCCCATTTGGTTACGAGGTTGGAGAAAAAGTCAAAGTCCCCTCCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR GCA 90 bp AGGACCCACATCTCTCTGAAAGTGAGGTTTCGGTTAGAGAGCCTGTaGAGCCACAGGCAGACACACCTGAGACTTGGTCCAAGCACCTTT +
Preference number: 1 (lower is better)
Translates to: RTHISLKVRFRLESL*SHRQTHLRLGPSTF
Trigger: AAAGGTGCTTGGACCAAGTCTCAGGTGTGTCTGCCTGTGGCTGCACAGGCTCTCTAACCGAAACCTCACTTTCAGAGAGATGTGGGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR GCA 90 bp CCTCCCCATCATCATTACACTCGCCATGCAGTATTCAACTCCCTGTaGCACTCAGAGGGAGGCAGAAGTCAGGGCCTGGAAAAGATCTTG +
Preference number: 1 (lower is better)
Translates to: PPHHHYTRHAVFNSL*HSEGGRSQGLEKIL
Trigger: CAAGATCTTTTCCAGGCCCTGACTTCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATGATGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 90 bp TCGGTTAGAGAGCCTGTGCAGCCACAGGCAGACACACCTGAGACTTaGTCCAAGCACCTTTCCTCCAAGAGGCTTTCCTCTATGTTCTCA +
Preference number: 1 (lower is better)
Translates to: SVREPVQPQADTPET*SKHLSSKRLSSMFS
Trigger: TGAGAACATAGAGGAAAGCCTCTTGGAGGAAAGGTGCTTGGACCAAGTCTCAGGTGTGTCTGCCTGTGGCTGCACAGGCTCTCTAACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 90 bp AAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTaGGGAAGTGATGGGATTAGGAGAGCTGAGATTACAATTACAGAG +
Preference number: 1 (lower is better)
Translates to: KRAWVSDRVGMSSLG*GSDGIRRAEITITE
Trigger: CTCTGTAATTGTAATCTCAGCTCTCCTAATCCCATCACTTCCCCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 90 bp GTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTaGGCTGGGGAAGTGATGGGATTAGGAGAGCTGAGATTACAATTA +
Preference number: 1 (lower is better)
Translates to: VRNGPGYQTGLECLL*AGEVMGLGELRLQL
Trigger: TAATTGTAATCTCAGCTCTCCTAATCCCATCACTTCCCCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 90 bp AGTAAAGCCCAAGCAACTCAATCAAGGTCACAAAACAGGCATAGCTaGGACCAGAAGCCAAGTCTCCCTCTGCCTTCTTCACTAGCTCAC +
Preference number: 1 (lower is better)
Translates to: SKAQATQSRSQNRHS*DQKPSLPLPSSLAH
Trigger: GTGAGCTAGTGAAGAAGGCAGAGGGAGACTTGGCTTCTGGTCTCAGCTATGCCTGTTTTGTGACCTTGATTGAGTTGCTTGGGCTTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 90 bp TGGGGAAGTGATGGGATTAGGAGAGCTGAGATTACAATTACAGAGTaGGAGGATGCCACCACTTCTAGCCAACCTGCAGATGAGAAGGTG +
Preference number: 1 (lower is better)
Translates to: WGSDGIRRAEITITE*EDATTSSQPADEKV
Trigger: CACCTTCTCATCTGCAGGTTGGCTAGAAGTGGTGGCATCCTCTCACTCTGTAATTGTAATCTCAGCTCTCCTAATCCCATCACTTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 90 bp AGGAATCAGGGTGAAGAAAGCATGTCAGTAACAGCAGAGTTGGTCTaGTGGCCAGTCAAGTGCCTTCCAACTCTGGTTCTTTCATTTTCC +
Preference number: 1 (lower is better)
Translates to: RNQGEESMSVTAELV*WPVKCLPTLVLSFS
Trigger: GGAAAATGAAAGAACCAGAGTTGGAAGGCACTTGACTGGCCACCAGACCAACTCTGCTGTTACTGACATGCTTTCTTCACCCTGATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 90 bp AATCAGGGTGAAGAAAGCATGTCAGTAACAGCAGAGTTGGTCTGGTaGCCAGTCAAGTGCCTTCCAACTCTGGTTCTTTCATTTTCCAGA +
Preference number: 1 (lower is better)
Translates to: NQGEESMSVTAELVW*PVKCLPTLVLSFSR
Trigger: TCTGGAAAATGAAAGAACCAGAGTTGGAAGGCACTTGACTGGCCACCAGACCAACTCTGCTGTTACTGACATGCTTTCTTCACCCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 90 bp TTCAGTCTGTGTCACCAAATGGCAAGTGCATTACTAACCACACAGTaGTCCCAGTTTATCAGGCTGCAGCAGAACAAAGTCAACATCCCT +
Preference number: 1 (lower is better)
Translates to: FSLCHQMASALLTTQ*SQFIRLQQNKVNIP
Trigger: AGGGATGTTGACTTTGTTCTGCTGCAGCCTGATAAACTGGGACCACTGTGTGGTTAGTAATGCACTTGCCATTTGGTGACACAGACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 90 bp ACCAGAGCACTGGTCTTTTCCAGGCAAAATGACTTCCTAGGCCCTTaGTCCATGCATGTTTCTCCTAACCTTTGTGTACTTTCACTAAGA +
Preference number: 1 (lower is better)
Translates to: TRALVFSRQNDFLGP*SMHVSPNLCVLSLR
Trigger: TCTTAGTGAAAGTACACAAAGGTTAGGAGAAACATGCATGGATCAAGGGCCTAGGAAGTCATTTTGCCTGGAAAAGACCAGTGCTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 90 bp GTATTTAGTGGCTTTTTATTTCCCATGTTTCTCCTGCAGATGGAATaGAACCTTCCAAAAAGAGGTAATCGGCAGCCGCCTAGAGACCAC +
Preference number: 1 (lower is better)
Translates to: VFSGFLFPMFLLQME*NLPKRGNRQPPRDH
Trigger: GTGGTCTCTAGGCGGCTGCCGATTACCTCTTTTTGGAAGGTTTCATTCCATCTGCAGGAGAAACATGGGAAATAAAAAGCCACTAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 90 bp TTGAAAGTTACAATGAGCAGTCTCTCTCATCACCGTTTCCCTTCTTaGTCCTTCAGTTGCCAAAAGAACTTGTCACAAGTTTGGGACATC +
Preference number: 1 (lower is better)
Translates to: LKVTMSSLSHHRFPS*SFSCQKNLSQVWDI
Trigger: GATGTCCCAAACTTGTGACAAGTTCTTTTGGCAACTGAAGGACCAAGAAGGGAAACGGTGATGAGAGAGACTGCTCATTGTAACTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 90 bp TTCCTCTATGTTCTCATTTCTCCTCCCAACAGGTATTTTTACCCCTaGTTTGTAGGCAGAAGTAAAGCCCAAGCAACTCAATCAAGGTCA +
Preference number: 1 (lower is better)
Translates to: FLYVLISPPNRYFYP*FVGRSKAQATQSRS
Trigger: TGACCTTGATTGAGTTGCTTGGGCTTTACTTCTGCCTACAAATCAGGGGTAAAAATACCTGTTGGGAGGAGAAATGAGAACATAGAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 90 bp ATAATGCAGTCATCCCTAATTTACCTACTGTGTAAATGTAGATTTTaGAGGTTGCTCAAAAGGGATGCAGCCATTATAGGGCACGTTATA +
Preference number: 1 (lower is better)
Translates to: IMQSSLIYLLCKCRF*RLLKRDAAIIGHVI
Trigger: TATAACGTGCCCTATAATGGCTGCATCCCTTTTGAGCAACCTCCAAAATCTACATTTACACAGTAGGTAAATTAGGGATGACTGCATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 90 bp GGAGTGGCTCCATCCTCCGCCACTAATGCTGAGTTTGCCCAGACCTaGGGTGCTGCCCTGGGCCGCCGAGCCTTCATCCCTCTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: GVAPSSATNAEFAQT*GAALGRRAFIPLPS
Trigger: GCTGGGGAGAGGGATGAAGGCTCGGCGGCCCAGGGCAGCACCCAAGGTCTGGGCAAACTCAGCATTAGTGGCGGAGGATGGAGCCACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGGGAGGCGGCTGGAGCTaGCAGGGCGGCAGCCACTCA +
Preference number: 2 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSEGGGWS*QGGSHS
Trigger: TGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCC...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
3UTR-3UTR TCA 90 bp GGGGAACGGGGTAACTCAGACCTCTGTAGCTATGCACACACCAGAGCACTGGTCGTCGTGGCAAGGGCCTaGGGCCTGTTCCTCACAGGC +
Preference number: 2 (lower is better)
Translates to: GERGNSDLCSYAHTRALVVVARA*GLFLTG
Trigger: GCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGAC...GACCAGTGCTCTGGTGTGTGCATAGCTACAGAGGTCTGAGTTACCCCGTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR GCA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGTGGGCCACATGCTGCTaGCCTTTCGCCTGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWWATCC*PFAWAW
Trigger: CCAGGCCCAGGCGAAAGGGCAGCAGCATGTGGCCCA...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp TCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAAGTGGAGGCGGCTGGAGCTaGCAGGGCGGCAGCCACTCA +
Preference number: 2 (lower is better)
Translates to: SSSPHSLQKPCAKAKLRSGGGWS*QGGSHS
Trigger: TGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCC...ACTTCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
3UTR-3UTR GCA 90 bp AGGTGGTGGTGCGCTCAGGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAACTTTGGGCGACAGCGTaGCATCATGCTGCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: RWWCAQVRNGPGYQTGLELWATA*HHAAGG
Trigger: CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAG...TTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 90 bp CTAGCATCTCCTTCCACGCTCCCAGGAGCTCAGCAAGGGAGCATCTaGTTCTCTGGCCATCCAGAGCAGCAGCCAGGGAGAGGAACAGCT +
Preference number: 2 (lower is better)
Translates to: LASPSTLPGAQQGSI*FSGHPEQQPGRGTA
Trigger: AGCTGTTCCTCTCCCTGGCTGCTGCTCTGGATGGCCAGAGAACAAGATGCTCCCTTGCTGAGCTCCTGGGAGCGTGGAAGGAGATGCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp CCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGATCTCACAGAAAGGGCTaGGCTGGAGGCGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: PSSSPHSLQKPCAKAKLRSHRKG*AGGGWS
Trigger: GCTCCAGCCGCCTCCAGCTCAGCCCTTTCTGTGAGA...TCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
3UTR-3UTR GCA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGGACAGCGTGCCATCATaGTGCTGGAGGGCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILDSVPS*CWRARR
Trigger: CCTTCTGGCCCTCCAGCAGCATGATGGCACGCTGTC...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCTCTCACAGAAAGGGCTaGGCTGGAGGCGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: HHYTRHAVFNSLCHSEGGSHRKG*AGGGWS
Trigger: GCTCCAGCCGCCTCCAGCTCAGCCCTTTCTGTGAGA...GCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR GCA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATGGTGGCCAGTCAAGTaGCTTCCAACTCTGGTTCTT +
Preference number: 2 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPWWPVK*LPTLVL
Trigger: AAGAACCAGAGTTGGAAGGCACTTGACTGGCCACCA...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGCAGAAAGGGCTGAGCTaGAGGCGGCTGGAGCTGACA +
Preference number: 2 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQQKGLS*RRLELT
Trigger: TGTCAGCTCCAGCCGCCTCCAGCTCAGCCCTTTCTG...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
3UTR-3UTR CCA 90 bp AGGTGGTGGTGCGCTCAGGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAAAACCAGGAGGAGCAGTaGGCTCCTTCAAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: RWWCAQVRNGPGYQTGLENQEEQ*APSRLR
Trigger: TCTCAGCCTTGAAGGAGCCCACTGCTCCTCCTGGTT...TTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 90 bp TGGTGGTGCGCTCAGGTGAGAAACGGGCCTGGGTATCAGACAGGGTaGGAATGTCTTCTCTGGGCTGGGGAAGTGATGGGATTAGGAGAG +
Preference number: 2 (lower is better)
Translates to: WWCAQVRNGPGYQTG*ECLLWAGEVMGLGE
Trigger: CTCTCCTAATCCCATCACTTCCCCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp TCCTTCAAGGCTGAGAGGACCCCTGTACCTTCCCTCTTTCCTGCTCTAGGGGTTCCAAAAAGGAAGGGGTaGGGACACAAGGACCCTCCC +
Preference number: 2 (lower is better)
Translates to: SFKAERTPVPSLFPALGVPKRKG*GHKDPP
Trigger: GGGAGGGTCCTTGTGTCCTCACCCCTTCCTTTTTGG...AACCCCTAGAGCAGGAAAGAGGGAAGGTACAGGGGTCCTCTCAGCCTTGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR GCA 90 bp CAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTAGCACCAACTCAGGGTaGCTCTGGATCAGAGTGAGC +
Preference number: 2 (lower is better)
Translates to: QSPELIPSSSPHSLQKPCSTNSG*LWIRVS
Trigger: GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCT...ACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
3UTR-3UTR GCA 90 bp GCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCAGCACCAACTCAGGGTaGCTCTGGATCAGAGTGAGC +
Preference number: 2 (lower is better)
Translates to: AWRWSQQSQSPELIPSSSSTNSG*LWIRVS
Trigger: GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCT...GCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
3UTR-3UTR CCA 90 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCCAGAAAGGGCTGAGCTaGAGGCGGCTGGAGCTGACA +
Preference number: 2 (lower is better)
Translates to: HHYTRHAVFNSLCHSEGGQKGLS*RRLELT
Trigger: TGTCAGCTCCAGCCGCCTCCAGCTCAGCCCTTTCTG...GCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp GGGGAACGGGGTAACTCAGACCTCTGTAGCTATGCACACACCAGAGCACTGGTCGCGAACACTGGCCACTaGCTACCAGTATTCCTTCCC +
Preference number: 2 (lower is better)
Translates to: GERGNSDLCSYAHTRALVANTGH*LPVFLP
Trigger: GGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGC...GACCAGTGCTCTGGTGTGTGCATAGCTACAGAGGTCTGAGTTACCCCGTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp GGGGAACGGGGTAACTCAGACCTCTGTAGCTATGCACACACCAGAGCACTGGTCGGTGAGAAACGGGCCTaGGTATCAGACAGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: GERGNSDLCSYAHTRALVGEKRA*VSDRVG
Trigger: TCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC...GACCAGTGCTCTGGTGTGTGCATAGCTACAGAGGTCTGAGTTACCCCGTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGGGAGGCGGCTGGAGCTaGCAGGGCGGCAGCCACTCA +
Preference number: 2 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKGGGWS*QGGSHS
Trigger: TGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCC...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp AGGTGGTGGTGCGCTCAGGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAAGCTCCTCTAGAGAGCTaGAGCCATCTGGTTCTTAGA +
Preference number: 2 (lower is better)
Translates to: RWWCAQVRNGPGYQTGLEAPLES*SHLVLR
Trigger: TCTAAGAACCAGATGGCTTCAGCTCTCTAGAGGAGC...TTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR GCA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGGTATTCAACTCCCTGTaGCACTCAGAGGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILVFNSL*HSEGGR
Trigger: TCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATAC...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR GCA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCACCCAGTTTATCAGGCTaGAGCAGAACAAAGTCAACA +
Preference number: 2 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPPSLSG*SRTKST
Trigger: TGTTGACTTTGTTCTGCTGCAGCCTGATAAACTGGG...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp TCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAAGTCAGAAAGGGCTGAGCTaGAGGCGGCTGGAGCTGACA +
Preference number: 2 (lower is better)
Translates to: SSSPHSLQKPCAKAKLRSQKGLS*RRLELT
Trigger: TGTCAGCTCCAGCCGCCTCCAGCTCAGCCCTTTCTG...ACTTCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
3UTR-3UTR CCA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGAACTCAGGGTGCCTCTaGATCAGAGTGAGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILNSGCL*IRVSSR
Trigger: TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTT...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGCACTCCACCCTATCGTaGCCCAGTCCACATAACACT +
Preference number: 2 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWHSTLS*PSPHNT
Trigger: AGTGTTATGTGGACTGGGCCACGATAGGGTGGAGTG...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp CAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAACCAAAGTGGCTTCCCTaGTCCAAAGCACCAACTCAG +
Preference number: 2 (lower is better)
Translates to: QSQSPELIPSSSPHSLQKPKWLP*SKAPTQ
Trigger: CTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGG...TTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
3UTR-3UTR TCA 90 bp CCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGACCAAAGTGGCTTCCCTaGTCCAAAGCACCAACTCAG +
Preference number: 2 (lower is better)
Translates to: PSSSPHSLQKPCAKAKLRPKWLP*SKAPTQ
Trigger: CTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGG...TCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
3UTR-3UTR TCA 90 bp TCCTTCAAGGCTGAGAGGACCCCTGTACCTTCCCTCTTTCCTGCTCTAGGGGTTAGCTGGCTGAGGTCCTaGCTCGGTAAGATCAGTTCA +
Preference number: 2 (lower is better)
Translates to: SFKAERTPVPSLFPALGVSWLRS*LGKISS
Trigger: TGAACTGATCTTACCGAGTCAGGACCTCAGCCAGCT...AACCCCTAGAGCAGGAAAGAGGGAAGGTACAGGGGTCCTCTCAGCCTTGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp CAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAAAGCTGGCTGAGGTCCTaGCTCGGTAAGATCAGTTCA +
Preference number: 2 (lower is better)
Translates to: QSQSPELIPSSSPHSLQKSWLRS*LGKISS
Trigger: TGAACTGATCTTACCGAGTCAGGACCTCAGCCAGCT...TTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
3UTR-3UTR GCA 90 bp TCCTTCAAGGCTGAGAGGACCCCTGTACCTTCCCTCTTTCCTGCTCTAGGGGTTGTCCACATAACACTGTaGCAGGGCCTAGCATCTCCT +
Preference number: 2 (lower is better)
Translates to: SFKAERTPVPSLFPALGVVHITL*QGLASP
Trigger: AGGAGATGCTAGGCCCTGGCACAGTGTTATGTGGAC...AACCCCTAGAGCAGGAAAGAGGGAAGGTACAGGGGTCCTCTCAGCCTTGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR GCA 90 bp AGGTGGTGGTGCGCTCAGGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAAGTTGCTCAAAAGGGATaGAGCCATTATAGGGCACGT +
Preference number: 2 (lower is better)
Translates to: RWWCAQVRNGPGYQTGLEVAQKG*SHYRAR
Trigger: ACGTGCCCTATAATGGCTGCATCCCTTTTGAGCAAC...TTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCCACCCTAGCTCAGCTTaGAGGTGGAGCCAACAGTCT +
Preference number: 2 (lower is better)
Translates to: HHYTRHAVFNSLCHSEGGHPSSA*RWSQQS
Trigger: AGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTG...GCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGTGGCCTAGATTCTCCTaGGATTTACTTCAAGGAATG +
Preference number: 2 (lower is better)
Translates to: RCGASCLWATACHHAAGGWPRFS*DLLQGM
Trigger: CATTCCTTGAAGTAAATCCCAGGAGAATCTAGGCCA...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp GAGTTCCTCCAGGGAAGGAACGCTTCAGGTCATGGAGAAGTTCAAGGGGAAAATCTCTCCCCAGCGCTGTaGTGCAAGCTGTCTTTGGGC +
Preference number: 2 (lower is better)
Translates to: EFLQGRNASGHGEVQGENLSPAL*CKLSLG
Trigger: GCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAG...ATTTTCCCCTTGAACTTCTCCATGACCTGAAGCGTTCCTTCCCTGGAGGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGTGGATTCCAGGAAGTTaGCTGGCTCTGTATTGTTCC +
Preference number: 2 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILWIPGS*LALYCS
Trigger: GGAACAATACAGAGCCAGTCAACTTCCTGGAATCCA...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGGTCAGTATGGTACAGTaGTGTAAATCACCAAAAAGG +
Preference number: 2 (lower is better)
Translates to: RCGASCLWATACHHAAGGVSMVQ*CKSPKR
Trigger: CCTTTTTGGTGATTTACACCACTGTACCATACTGAC...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGAGAGCTGAAGCCATCTaGTTCTTAGATTCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWRAEAI*FLDSSP
Trigger: GGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCT...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp GAGTTCCTCCAGGGAAGGAACGCTTCAGGTCATGGAGAAGTTCAAGGGGAAAATAGCCTAAGTAGGTCGTaGCAAGGGCCTGAGGCCTGT +
Preference number: 2 (lower is better)
Translates to: EFLQGRNASGHGEVQGENSLSRS*QGPEAC
Trigger: ACAGGCCTCAGGCCCTTGCCACGACCTACTTAGGCT...ATTTTCCCCTTGAACTTCTCCATGACCTGAAGCGTTCCTTCCCTGGAGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp CAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAAGTGCTAAGGCAAAGTTaGGAAGTTAAGGCTGAGCAG +
Preference number: 2 (lower is better)
Translates to: QSQSPELIPSSSPHSLQKVLRQS*EVKAEQ
Trigger: CTGCTCAGCCTTAACTTCTCAACTTTGCCTTAGCAC...TTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
3UTR-3UTR TCA 90 bp GGGGAACGGGGTAACTCAGACCTCTGTAGCTATGCACACACCAGAGCACTGGTCGGCTTCATCGATTGGTaGAAAATCGACGTGTTCATC +
Preference number: 2 (lower is better)
Translates to: GERGNSDLCSYAHTRALVGFIDW*KIDVFI
Trigger: GATGAACACGTCGATTTTTCACCAATCGATGAAGCC...GACCAGTGCTCTGGTGTGTGCATAGCTACAGAGGTCTGAGTTACCCCGTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp TGTTCTGTTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCATCAGGTTGGGACCTCTTGAGAGCTGGCTaGGGTCCTGACTCGGTAAGA +
Preference number: 2 (lower is better)
Translates to: CSVAPPYCLKAVISSGWDLLRAG*GPDSVR
Trigger: TCTTACCGAGTCAGGACCTCAGCCAGCTCTCAAGAG...GTCCCAACCTGATGAGATTACGGCCTTGAGACAATAAGGTGGAGCAACAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp GAGTTCCTCCAGGGAAGGAACGCTTCAGGTCATGGAGAAGTTCAAGGGGAAAATAGCTCAGCTTGGAGGTaGAGCCAACAGTCTCAGTCT +
Preference number: 2 (lower is better)
Translates to: EFLQGRNASGHGEVQGENSSAWR*SQQSQS
Trigger: AGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCT...ATTTTCCCCTTGAACTTCTCCATGACCTGAAGCGTTCCTTCCCTGGAGGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp TGTTCTGTTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCATCAGGTTGGGACGAGCATCTTGTTCTCTaGCCATCCAGAGCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: CSVAPPYCLKAVISSGWDEHLVL*PSRAAA
Trigger: GGCTGCTGCTCTGGATGGCCAGAGAACAAGATGCTC...GTCCCAACCTGATGAGATTACGGCCTTGAGACAATAAGGTGGAGCAACAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp AGAACAGAACCCAGGGGCACCTGTCCTACTTCTTTATCTGGTCTTGGATTCCAGCACTCCACCCTATCGTaGCCCAGTCCACATAACACT +
Preference number: 2 (lower is better)
Translates to: RTEPRGTCPTSLSGLGFQHSTLS*PSPHNT
Trigger: AGTGTTATGTGGACTGGGCCACGATAGGGTGGAGTG...CTGGAATCCAAGACCAGATAAAGAAGTAGGACAGGTGCCCCTGGGTTCTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp GGGGAACGGGGTAACTCAGACCTCTGTAGCTATGCACACACCAGAGCACTGGTCTGTCATTGCAGAGCATaGCTTCATCGATTGGTGAAA +
Preference number: 2 (lower is better)
Translates to: GERGNSDLCSYAHTRALVCHCRA*LHRLVK
Trigger: TTTCACCAATCGATGAAGCCATGCTCTGCAATGACA...GACCAGTGCTCTGGTGTGTGCATAGCTACAGAGGTCTGAGTTACCCCGTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR GCA 90 bp TTGCTCAAAAGGGATGCAGCCATTATAGGGCACGTTATAGTGAGAATGCAGTGTCGGTTAGAGAGCCTGTaGAGCCACAGGCAGACACAC +
Preference number: 2 (lower is better)
Translates to: LLKRDAAIIGHVIVRMQCRLESL*SHRQTH
Trigger: GTGTGTCTGCCTGTGGCTGCACAGGCTCTCTAACCG...ACACTGCATTCTCACTATAACGTGCCCTATAATGGCTGCATCCCTTTTGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR GCA 90 bp TCCTTCAAGGCTGAGAGGACCCCTGTACCTTCCCTCTTTCCTGCTCTAGGGGTTAGCAGAAGTGTGCCTTaGTTTATGCAACATACGTCT +
Preference number: 2 (lower is better)
Translates to: SFKAERTPVPSLFPALGVSRSVP*FMQHTS
Trigger: AGACGTATGTTGCATAAAGCAAGGCACACTTCTGCT...AACCCCTAGAGCAGGAAAGAGGGAAGGTACAGGGGTCCTCTCAGCCTTGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp TGTTCTGTTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCATCAGGTTGGGACCTAGGGTGTGGATCCTaGAGACAAAGGACCCACATC +
Preference number: 2 (lower is better)
Translates to: CSVAPPYCLKAVISSGWDLGCGS*RQRTHI
Trigger: GATGTGGGTCCTTTGTCTCCAGGATCCACACCCTAG...GTCCCAACCTGATGAGATTACGGCCTTGAGACAATAAGGTGGAGCAACAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp CATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCAGAAGTCAGGGCCTGAGTGCCTTCCAACTCTaGTTCTTTCATTTTCCAGAT +
Preference number: 2 (lower is better)
Translates to: HAVFNSLCHSEGGRSQGLSAFQL*FFHFPD
Trigger: ATCTGGAAAATGAAAGAACCAGAGTTGGAAGGCACT...CAGGCCCTGACTTCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp GAGTTCCTCCAGGGAAGGAACGCTTCAGGTCATGGAGAAGTTCAAGGGGAAAATGGTATCAGACAGGGTTaGAATGTCTTCTCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: EFLQGRNASGHGEVQGENGIRQG*NVFSGL
Trigger: CAGCCCAGAGAAGACATTCCAACCCTGTCTGATACC...ATTTTCCCCTTGAACTTCTCCATGACCTGAAGCGTTCCTTCCCTGGAGGAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 90 bp ACCTCTAGGAATCAGGGTGAAGAAAGCATGTCAGTAACAGCAGAGTaGGTCTGGTGGCCAGTCAAGTGCCTTCCAACTCTGGTTCTTTCA +
Preference number: 2 (lower is better)
Translates to: TSRNQGEESMSVTAE*VWWPVKCLPTLVLS
Trigger: TGAAAGAACCAGAGTTGGAAGGCACTTGACTGGCCACCAGACCAACTCTGCTGTTACTGACATGCTTTCTTCACCCTGATTCCTAGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 90 bp ACAGAACAGAACCCAGGGGCACCTGTCCTACTTCTTTATCTGGTCTaGGATTCCAGGAAGTTGACTGGCTCTGTATTGTTCCTGGAGGTA +
Preference number: 2 (lower is better)
Translates to: TEQNPGAPVLLLYLV*DSRKLTGSVLFLEV
Trigger: TACCTCCAGGAACAATACAGAGCCAGTCAACTTCCTGGAATCCAAGACCAGATAAAGAAGTAGGACAGGTGCCCCTGGGTTCTGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp GAGTTCCTCCAGGGAAGGAACGCTTCAGGTCATGGAGAAGTTCAAGGGGAAAATGTGCTAAGGCAAAGTTaGGAAGTTAAGGCTGAGCAG +
Preference number: 2 (lower is better)
Translates to: EFLQGRNASGHGEVQGENVLRQS*EVKAEQ
Trigger: CTGCTCAGCCTTAACTTCTCAACTTTGCCTTAGCAC...ATTTTCCCCTTGAACTTCTCCATGACCTGAAGCGTTCCTTCCCTGGAGGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp TGTTCTGTTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCATCAGGTTGGGACACATCTGCCATAACTTaGCCAGACACAGTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: CSVAPPYCLKAVISSGWDTSAIT*PDTVPP
Trigger: TGGGGGAACTGTGTCTGGTCAAGTTATGGCAGATGT...GTCCCAACCTGATGAGATTACGGCCTTGAGACAATAAGGTGGAGCAACAGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR GCA 90 bp TTGCTCAAAAGGGATGCAGCCATTATAGGGCACGTTATAGTGAGAATGCAGTGTAGCACCAACTCAGGGTaGCTCTGGATCAGAGTGAGC +
Preference number: 2 (lower is better)
Translates to: LLKRDAAIIGHVIVRMQCSTNSG*LWIRVS
Trigger: GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCT...ACACTGCATTCTCACTATAACGTGCCCTATAATGGCTGCATCCCTTTTGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR GCA 90 bp TGTTCTGTTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCATCAGGTTGGGACAAGAAGCTTAGGACTTaGCTCTCATCTGACTGGGGC +
Preference number: 2 (lower is better)
Translates to: CSVAPPYCLKAVISSGWDKKLRT*LSSDWG
Trigger: GCCCCAGTCAGATGAGAGGCAAGTCCTAAGCTTCTT...GTCCCAACCTGATGAGATTACGGCCTTGAGACAATAAGGTGGAGCAACAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp ACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATCTGACTCTCTTGAGAGCTGGCTaGGGTCCTGACTCGGTAAGA +
Preference number: 2 (lower is better)
Translates to: TKSTSLSIRSLGLASHLTLLRAG*GPDSVR
Trigger: TCTTACCGAGTCAGGACCTCAGCCAGCTCTCAAGAG...AGTCAGATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp AGAACAGAACCCAGGGGCACCTGTCCTACTTCTTTATCTGGTCTTGGATTCCAGTCTGTAAACAACACCTaGATACAACAGGAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: RTEPRGTCPTSLSGLGFQSVNNT*IQQESC
Trigger: GCAGCTCTCCTGTTGTATTCAGGTGTTGTTTACAGA...CTGGAATCCAAGACCAGATAAAGAAGTAGGACAGGTGCCCCTGGGTTCTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR GCA 90 bp ACTCAGTCAACCAGGGCCCTTAGCACAAAAGGGCAGAAGACACTTTTGGTCTACGTAGATTTTGGAGGTTaGTCAAAAGGGATGCAGCCA +
Preference number: 2 (lower is better)
Translates to: TQSTRALSTKGQKTLLVYVDFGG*SKGMQP
Trigger: TGGCTGCATCCCTTTTGAGCAACCTCCAAAATCTAC...GTAGACCAAAAGTGTCTTCTGCCCTTTTGTGCTAAGGGCCCTGGTTGACTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR GCA 90 bp GAGTTCCTCCAGGGAAGGAACGCTTCAGGTCATGGAGAAGTTCAAGGGGAAAATCCCAGTTTATCAGGCTaGAGCAGAACAAAGTCAACA +
Preference number: 2 (lower is better)
Translates to: EFLQGRNASGHGEVQGENPSLSG*SRTKST
Trigger: TGTTGACTTTGTTCTGCTGCAGCCTGATAAACTGGG...ATTTTCCCCTTGAACTTCTCCATGACCTGAAGCGTTCCTTCCCTGGAGGAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp CTCCAAGAGGCTTTCCTCTATGTTCTCATTTCTCCTCCCAACAGGTATTTTTACCCAAAGTGGCTTCCCTaGTCCAAAGCACCAACTCAG +
Preference number: 2 (lower is better)
Translates to: LQEAFLYVLISPPNRYFYPKWLP*SKAPTQ
Trigger: CTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGG...GTAAAAATACCTGTTGGGAGGAGAAATGAGAACATAGAGGAAAGCCTCTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp AGTTTATCAGGCTGCAGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTAACAGGCAGACACACCTaGGACTTGGTCCAAGCACCT +
Preference number: 2 (lower is better)
Translates to: SLSGCSRTKSTSLSIRSLTGRHT*DLVQAP
Trigger: AGGTGCTTGGACCAAGTCTCAGGTGTGTCTGCCTGT...TAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCTGCAGCCTGATAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR GCA 90 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCAAGCATACTTTAGGCTaGACTAAAGTAAGGAGTACT +
Preference number: 2 (lower is better)
Translates to: HHYTRHAVFNSLCHSEGGKHTLG*TKVRST
Trigger: AGTACTCCTTACTTTAGTGCAGCCTAAAGTATGCTT...GCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR GCA 90 bp TGTTCTGTTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCATCAGGTTGGGACACACTTTTGGTCTACTaGACACCCACCATCACTGAA +
Preference number: 2 (lower is better)
Translates to: CSVAPPYCLKAVISSGWDTLLVY*TPTITE
Trigger: TTCAGTGATGGTGGGTGTGCAGTAGACCAAAAGTGT...GTCCCAACCTGATGAGATTACGGCCTTGAGACAATAAGGTGGAGCAACAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp TATTGTCATTGCAGAGCATGGCTTCATCGATTGGTGAAAAATCGACGTGTTCATGAGCATCTTGTTCTCTaGCCATCCAGAGCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: YCHCRAWLHRLVKNRRVHEHLVL*PSRAAA
Trigger: GGCTGCTGCTCTGGATGGCCAGAGAACAAGATGCTC...ATGAACACGTCGATTTTTCACCAATCGATGAAGCCATGCTCTGCAATGACAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp AGAACAGAACCCAGGGGCACCTGTCCTACTTCTTTATCTGGTCTTGGATTCCAGTTAAAATCTAGGGTGTaGATCCTGGAGACAAAGGAC +
Preference number: 2 (lower is better)
Translates to: RTEPRGTCPTSLSGLGFQLKSRV*ILETKD
Trigger: GTCCTTTGTCTCCAGGATCCACACCCTAGATTTTAA...CTGGAATCCAAGACCAGATAAAGAAGTAGGACAGGTGCCCCTGGGTTCTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp ACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATCTGACTACATCTGCCATAACTTaGCCAGACACAGTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: TKSTSLSIRSLGLASHLTTSAIT*PDTVPP
Trigger: TGGGGGAACTGTGTCTGGTCAAGTTATGGCAGATGT...AGTCAGATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp ACACACATAAAGCAGAAGTGTGCCTTGCTTTATGCAACATACGTCTTCCATAGAAACTCAGGGTGCCTCTaGATCAGAGTGAGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: THIKQKCALLYATYVFHRNSGCL*IRVSSR
Trigger: TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTT...TCTATGGAAGACGTATGTTGCATAAAGCAAGGCACACTTCTGCTTTATGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp TATTGTCATTGCAGAGCATGGCTTCATCGATTGGTGAAAAATCGACGTGTTCATCTAGGGTGTGGATCCTaGAGACAAAGGACCCACATC +
Preference number: 2 (lower is better)
Translates to: YCHCRAWLHRLVKNRRVHLGCGS*RQRTHI
Trigger: GATGTGGGTCCTTTGTCTCCAGGATCCACACCCTAG...ATGAACACGTCGATTTTTCACCAATCGATGAAGCCATGCTCTGCAATGACAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 90 bp TCTCAACACCAGGAAGTGCATCTAACCAGGGATTTGCCAACACATTaGTTAGTCTGTAAACAACACCTGAATACAACAGGAGAGCTGCCA +
Preference number: 2 (lower is better)
Translates to: SQHQEVHLTRDLPTH*LVCKQHLNTTGELP
Trigger: TGGCAGCTCTCCTGTTGTATTCAGGTGTTGTTTACAGACTAACAAATGTGTTGGCAAATCCCTGGTTAGATGCACTTCCTGGTGTTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR TCA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGTCTGTAAACAACACCTaGATACAACAGGAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKSVNNT*IQQESC
Trigger: GCAGCTCTCCTGTTGTATTCAGGTGTTGTTTACAGA...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR GCA 90 bp AGTTTATCAGGCTGCAGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTATGGTGGCCAGTCAAGTaGCTTCCAACTCTGGTTCTT +
Preference number: 2 (lower is better)
Translates to: SLSGCSRTKSTSLSIRSLWWPVK*LPTLVL
Trigger: AAGAACCAGAGTTGGAAGGCACTTGACTGGCCACCA...TAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCTGCAGCCTGATAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp GCTTCATCGATTGGTGAAAAATCGACGTGTTCATCTCAACACCAGGAAGTGCATGATCAGTTCACTTTATaGACCTGTCCCAAAGTGGCT +
Preference number: 2 (lower is better)
Translates to: ASSIGEKSTCSSQHQEVHDQFTL*TCPKVA
Trigger: AGCCACTTTGGGACAGGTCCATAAAGTGAACTGATC...ATGCACTTCCTGGTGTTGAGATGAACACGTCGATTTTTCACCAATCGATGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 90 bp AATGAGCAGTCTCTCTCATCACCGTTTCCCTTCTTGGTCCTTCAGTaGCCAAAAGAACTTGTCACAAGTTTGGGACATCAGGTTATGATA +
Preference number: 2 (lower is better)
Translates to: NEQSLSSPFPFLVLQ*PKELVTSLGHQVMI
Trigger: TATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTTTGGCAACTGAAGGACCAAGAAGGGAAACGGTGATGAGAGAGACTGCTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTCACCCTAGCTCAGCTTaGAGGTGGAGCCAACAGTCT +
Preference number: 2 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPHPSSA*RWSQQS
Trigger: AGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTG...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp AAAGAACTTGTCACAAGTTTGGGACATCAGGTTATGATAAAGATAGACACTAGATGCCTCTCATCTGACTaGGGCCACTCAGTCAACCAG +
Preference number: 2 (lower is better)
Translates to: KELVTSLGHQVMIKIDTRCLSSD*GHSVNQ
Trigger: CTGGTTGACTGAGTGGCCCCAGTCAGATGAGAGGCA...TCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 90 bp TCGACGTGTTCATCTCAACACCAGGAAGTGCATCTAACCAGGGATTaGCCAACACATTTGTTAGTCTGTAAACAACACCTGAATACAACA +
Preference number: 2 (lower is better)
Translates to: STCSSQHQEVHLTRD*PTHLLVCKQHLNTT
Trigger: TGTTGTATTCAGGTGTTGTTTACAGACTAACAAATGTGTTGGCAAATCCCTGGTTAGATGCACTTCCTGGTGTTGAGATGAACACGTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 90 bp TTTGAAAGTTACAATGAGCAGTCTCTCTCATCACCGTTTCCCTTCTaGGTCCTTCAGTTGCCAAAAGAACTTGTCACAAGTTTGGGACAT +
Preference number: 2 (lower is better)
Translates to: FESYNEQSLSSPFPF*VLQLPKELVTSLGH
Trigger: ATGTCCCAAACTTGTGACAAGTTCTTTTGGCAACTGAAGGACCAAGAAGGGAAACGGTGATGAGAGAGACTGCTCATTGTAACTTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CCA 90 bp ACACACATAAAGCAGAAGTGTGCCTTGCTTTATGCAACATACGTCTTCCATAGAGATCAGTTCACTTTATaGACCTGTCCCAAAGTGGCT +
Preference number: 2 (lower is better)
Translates to: THIKQKCALLYATYVFHRDQFTL*TCPKVA
Trigger: AGCCACTTTGGGACAGGTCCATAAAGTGAACTGATC...TCTATGGAAGACGTATGTTGCATAAAGCAAGGCACACTTCTGCTTTATGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 90 bp CAGTCATCCCTAATTTACCTACTGTGTAAATGTAGATTTTGGAGGTaGCTCAAAAGGGATGCAGCCATTATAGGGCACGTTATAGTGAGA +
Preference number: 2 (lower is better)
Translates to: QSSLIYLLCKCRFWR*LKRDAAIIGHVIVR
Trigger: TCTCACTATAACGTGCCCTATAATGGCTGCATCCCTTTTGAGCAACCTCCAAAATCTACATTTACACAGTAGGTAAATTAGGGATGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 90 bp TTTCCCTTCTTGGTCCTTCAGTTGCCAAAAGAACTTGTCACAAGTTaGGGACATCAGGTTATGATAAAGATAGACACTAGAAGAGAGAAT +
Preference number: 2 (lower is better)
Translates to: FPFLVLQLPKELVTS*GHQVMIKIDTRREN
Trigger: ATTCTCTCTTCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTTTGGCAACTGAAGGACCAAGAAGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR GCA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTAAGCATACTTTAGGCTaGACTAAAGTAAGGAGTACT +
Preference number: 2 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPKHTLG*TKVRST
Trigger: AGTACTCCTTACTTTAGTGCAGCCTAAAGTATGCTT...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 72 bp CCATGGGCCACATGCTGCTGCCCTTTCGCCTGGGCCTaGGGGGCCCCATCGGCTCAGGCCACCAATTCTTCC +
Preference number: 3 (lower is better)
Translates to: PWATCCCPFAWA*GAPSAQATNSS
Trigger: GGAAGAATTGGTGGCCTGAGCCGATGGGGCCCCCCAGGCCCAGGCGAAAGGGCAGCAGCATGTGGCCCATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 72 bp CATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTaGGCGACAGCGTGCCATCATGCTGCTGGAGGGCCA +
Preference number: 3 (lower is better)
Translates to: HPSPQRCGASCL*ATACHHAAGGP
Trigger: TGGCCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 72 bp CATCCTCCGCCACTAATGCTGAGTTTGCCCAGACCTTaGGTGCTGCCCTGGGCCGCCGAGCCTTCATCCCTC +
Preference number: 3 (lower is better)
Translates to: HPPPLMLSLPRP*VLPWAAEPSSL
Trigger: GAGGGATGAAGGCTCGGCGGCCCAGGGCAGCACCCAAGGTCTGGGCAAACTCAGCATTAGTGGCGGAGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR GCA 72 bp CAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTaGCATCATGCTGCTGGAGGGCCAGAAGGTGATCCC +
Preference number: 3 (lower is better)
Translates to: QRCGASCLWATA*HHAAGGPEGDP
Trigger: GGGATCACCTTCTGGCCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 72 bp GGGCCAGAAGGTGATCCCACAGCGAACACTGGCCACTaGCTACCAGTATTCCTTCCCAGAGCTAGGGGCTGC +
Preference number: 3 (lower is better)
Translates to: GPEGDPTANTGH*LPVFLPRARGC
Trigger: GCAGCCCCTAGCTCTGGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGATCACCTTCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 72 bp CGCCAGGTGGTGGTGCGCTCAGGTGAGAAACGGGCCTaGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGC +
Preference number: 3 (lower is better)
Translates to: RQVVVRSGEKRA*VSDRVGMSSLG
Trigger: GCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCTGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 72 bp CAGCCAGGCTTCCTGGAGATTCTACACGCCAGGTGGTaGTGCGCTCAGGTGAGAAACGGGCCTGGGTATCAG +
Preference number: 3 (lower is better)
Translates to: QPGFLEILHARW*CAQVRNGPGYQ
Trigger: CTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCTGGCGTGTAGAATCTCCAGGAAGCCTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 72 bp CTGCAGCCAGGCTTCCTGGAGATTCTACACGCCAGGTaGTGGTGCGCTCAGGTGAGAAACGGGCCTGGGTAT +
Preference number: 3 (lower is better)
Translates to: LQPGFLEILHAR*WCAQVRNGPGY
Trigger: ATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCTGGCGTGTAGAATCTCCAGGAAGCCTGGCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 72 bp CCCATGCCCTTGAAGCAAACCACGTGCACGGGGTCCTaGATGGAGTGGCTCCATCCTCCGCCACTAATGCTG +
Preference number: 3 (lower is better)
Translates to: PMPLKQTTCTGS*MEWLHPPPLML
Trigger: CAGCATTAGTGGCGGAGGATGGAGCCACTCCATTCAGGACCCCGTGCACGTGGTTTGCTTCAAGGGCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 72 bp GTCTCCAAATGGGGAGATCCTAAGGGCCAGAGAAGGTaGGGCCAAGGGGAGCCTCCACTACAGAGAGCCAGG +
Preference number: 3 (lower is better)
Translates to: VSKWGDPKGQRR*GQGEPPLQRAR
Trigger: CCTGGCTCTCTGTAGTGGAGGCTCCCCTTGGCCTCACCTTCTCTGGCCCTTAGGATCTCCCCATTTGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR GCA 72 bp ACTCCACCCTATCGTGGCCCAGTCCACATAACACTGTaGCAGGGCCTAGCATCTCCTTCCACGCTCCCAGGA +
Preference number: 3 (lower is better)
Translates to: TPPYRGPVHITL*QGLASPSTLPG
Trigger: TCCTGGGAGCGTGGAAGGAGATGCTAGGCCCTGGCACAGTGTTATGTGGACTGGGCCACGATAGGGTGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR GCA 72 bp CCAGGCTTCCTGGAGATTCTACACGCCAGGTGGTGGTaGGCTCAGGTGAGAAACGGGCCTGGGTATCAGACA +
Preference number: 3 (lower is better)
Translates to: PGFLEILHARWW*AQVRNGPGYQT
Trigger: TGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCTGGCGTGTAGAATCTCCAGGAAGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CAA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGATCATTGTCACCTCTTaGACCAGCCTGTCTCCAACA +
Preference number: 3 (lower is better)
Translates to: RCGASCLWATACHHAAGGIIVTS*TSLSPT
Trigger: TGTTGGAGACAGGCTGGTCAAAGAGGTGACAATGAT...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CAA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCACCGTTTCCCTTCTaGGTCCTTCAGTTGCCAAAA +
Preference number: 3 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPSPFPF*VLQLPK
Trigger: TTTTGGCAACTGAAGGACCAAGAAGGGAAACGGTGA...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 72 bp ACAGAAACCAGGAGGAGCAGTGGGCTCCTTCAAGGCTaGGAGGACCCCTGTACCTTCCCTCTTTCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: TETRRSSGLLQG*EDPCTFPLSCS
Trigger: AGAGCAGGAAAGAGGGAAGGTACAGGGGTCCTCTCAGCCTTGAAGGAGCCCACTGCTCCTCCTGGTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 72 bp TGGAGATTCTACACGCCAGGTGGTGGTGCGCTCAGGTaGGAAACGGGCCTGGGTATCAGACAGGGTTGGAAT +
Preference number: 3 (lower is better)
Translates to: WRFYTPGGGALR*ETGLGIRQGWN
Trigger: ATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCTGGCGTGTAGAATCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 72 bp ATTGTGTTCCACCGGCAGCTTACTACCAGCCCAGTCTaGCTGCGGAGTATGATGAAGACAGCCCAGGAGGGG +
Preference number: 3 (lower is better)
Translates to: IVFHRQLTTSPV*LRSMMKTAQEG
Trigger: CCCCTCCTGGGCTGTCTTCATCATACTCCGCAGTCAGACTGGGCTGGTAGTAAGCTGCCGGTGGAACACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 72 bp GAGCCTGTGCAGCCACAGGCAGACACACCTGAGACTTaGTCCAAGCACCTTTCCTCCAAGAGGCTTTCCTCT +
Preference number: 3 (lower is better)
Translates to: EPVQPQADTPET*SKHLSSKRLSS
Trigger: AGAGGAAAGCCTCTTGGAGGAAAGGTGCTTGGACCAAGTCTCAGGTGTGTCTGCCTGTGGCTGCACAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CAA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCAAAGCAGAAGTGTGCCTaGCTTTATGCAACATACGTC +
Preference number: 3 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPKQKCA*LYATYV
Trigger: GACGTATGTTGCATAAAGCAAGGCACACTTCTGCTT...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CAA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATTGGATTCCAGGAAGTaGACTGGCTCTGTATTGTTC +
Preference number: 3 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPLDSRK*TGSVLF
Trigger: GAACAATACAGAGCCAGTCAACTTCCTGGAATCCAA...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CAA 90 bp GGGGAACGGGGTAACTCAGACCTCTGTAGCTATGCACACACCAGAGCACTGGTCGGCCTGGAAAAGATCTaGTCTAGAGACTCCCCACAG +
Preference number: 3 (lower is better)
Translates to: GERGNSDLCSYAHTRALVGLEKI*SRDSPQ
Trigger: CTGTGGGGAGTCTCTAGACAAGATCTTTTCCAGGCC...GACCAGTGCTCTGGTGTGTGCATAGCTACAGAGGTCTGAGTTACCCCGTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CAA 90 bp TCCTTCAAGGCTGAGAGGACCCCTGTACCTTCCCTCTTTCCTGCTCTAGGGGTTCCACTAATGCTGAGTTaGCCCAGACCTTGGGTGCTG +
Preference number: 3 (lower is better)
Translates to: SFKAERTPVPSLFPALGVPLMLS*PRPWVL
Trigger: CAGCACCCAAGGTCTGGGCAAACTCAGCATTAGTGG...AACCCCTAGAGCAGGAAAGAGGGAAGGTACAGGGGTCCTCTCAGCCTTGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR GCA 72 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTaGCTCTGGATCAGAGTGAGCAGCAGAGGGACTCTC +
Preference number: 3 (lower is better)
Translates to: KVASLIQSTNSG*LWIRVSSRGTL
Trigger: GAGAGTCCCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
3UTR CCA 72 bp GCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTaGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAA +
Preference number: 3 (lower is better)
Translates to: ASLIQSTNSGCL*IRVSSRGTLTE
Trigger: TTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
3UTR-3UTR CAA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCACGGATCACATTAATATaGTCATTGCAGAGCATGGCT +
Preference number: 3 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPRITLI*SLQSMA
Trigger: AGCCATGCTCTGCAATGACAATATTAATGTGATCCG...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR GCA 72 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTaGCACTCAGAGGGAGGCAGAAGTCAGGGCCTGGAA +
Preference number: 3 (lower is better)
Translates to: HHYTRHAVFNSL*HSEGGRSQGLE
Trigger: TTCCAGGCCCTGACTTCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR GCA 72 bp ACACAAGGACCCTCCCCATCATCATTACACTCGCCATaGAGTATTCAACTCCCTGTGCCACTCAGAGGGAGG +
Preference number: 3 (lower is better)
Translates to: TQGPSPSSLHSP*SIQLPVPLRGR
Trigger: CCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATGATGGGGAGGGTCCTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CAA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGTGTTGCTCCACCTTATaGTCTCAAGGCCGTAATCTC +
Preference number: 3 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILCCSTL*SQGRNL
Trigger: GAGATTACGGCCTTGAGACAATAAGGTGGAGCAACA...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CAA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCAGATTTGCCAACACATTaGTTAGTCTGTAAACAACAC +
Preference number: 3 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPDLPTH*LVCKQH
Trigger: GTGTTGTTTACAGACTAACAAATGTGTTGGCAAATC...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CAA 90 bp TCCTTCAAGGCTGAGAGGACCCCTGTACCTTCCCTCTTTCCTGCTCTAGGGGTTATTGTCTCACTAACCTaGGCTCATCTCTTTGGCCTA +
Preference number: 3 (lower is better)
Translates to: SFKAERTPVPSLFPALGVIVSLT*AHLFGL
Trigger: TAGGCCAAAGAGATGAGCCAAGGTTAGTGAGACAAT...AACCCCTAGAGCAGGAAAGAGGGAAGGTACAGGGGTCCTCTCAGCCTTGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 72 bp AGTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTaGTCCAAAGCACCAACTCAGGGTGCCTCTGGATCA +
Preference number: 3 (lower is better)
Translates to: SSLYGPVPKWLP*SKAPTQGASGS
Trigger: TGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
3UTR-3UTR CAA 90 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCTTGGATTCCAGGAAGTaGACTGGCTCTGTATTGTTC +
Preference number: 3 (lower is better)
Translates to: HHYTRHAVFNSLCHSEGGLDSRK*TGSVLF
Trigger: GAACAATACAGAGCCAGTCAACTTCCTGGAATCCAA...GCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 72 bp CCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTaGGAAGTTAAGGCTGAGCAGAACCTCTTGAGAGCT +
Preference number: 3 (lower is better)
Translates to: PTPYRNPVLRQS*EVKAEQNLLRA
Trigger: AGCTCTCAAGAGGTTCTGCTCAGCCTTAACTTCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
3UTR TCA 72 bp GCCACCACTTCTAGCCAACCTGCAGATGAGAAGGTGTaGGGTCTTAAAGACAGCCATACTGCTCACTTCTGT +
Preference number: 3 (lower is better)
Translates to: ATTSSQPADEKV*GLKDSHTAHFC
Trigger: ACAGAAGTGAGCAGTATGGCTGTCTTTAAGACCTCACACCTTCTCATCTGCAGGTTGGCTAGAAGTGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 72 bp TGCACACACCAGAGCACTGGTCTTTTCCAGGCAAAATaGCTTCCTAGGCCCTTGATCCATGCATGTTTCTCC +
Preference number: 3 (lower is better)
Translates to: CTHQSTGLFQAK*LPRPLIHACFS
Trigger: GGAGAAACATGCATGGATCAAGGGCCTAGGAAGTCATTTTGCCTGGAAAAGACCAGTGCTCTGGTGTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 72 bp GGTGAAGAAAGCATGTCAGTAACAGCAGAGTTGGTCTaGTGGCCAGTCAAGTGCCTTCCAACTCTGGTTCTT +
Preference number: 3 (lower is better)
Translates to: GEESMSVTAELV*WPVKCLPTLVL
Trigger: AAGAACCAGAGTTGGAAGGCACTTGACTGGCCACCAGACCAACTCTGCTGTTACTGACATGCTTTCTTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 72 bp GGGGACTTTGACTTTTTCTCCAACCTCGTAACCAAATaGGAAGCTGCAGCCAGGCTTCCTGGAGATTCTACA +
Preference number: 3 (lower is better)
Translates to: GDFDFFSNLVTK*EAAARLPGDST
Trigger: TGTAGAATCTCCAGGAAGCCTGGCTGCAGCTTCCCATTTGGTTACGAGGTTGGAGAAAAAGTCAAAGTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CAA 90 bp ACTCAGTCAACCAGGGCCCTTAGCACAAAAGGGCAGAAGACACTTTTGGTCTACTGTAGATTTTGGAGGTaGCTCAAAAGGGATGCAGCC +
Preference number: 3 (lower is better)
Translates to: TQSTRALSTKGQKTLLVYCRFWR*LKRDAA
Trigger: GGCTGCATCCCTTTTGAGCAACCTCCAAAATCTACA...GTAGACCAAAAGTGTCTTCTGCCCTTTTGTGCTAAGGGCCCTGGTTGACTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 72 bp GAAGTTAAGGCTGAGCAGAACCTCTTGAGAGCTGGCTaGGGTCCTGACTCGGTAAGATCAGTTCACTTTATG +
Preference number: 3 (lower is better)
Translates to: EVKAEQNLLRAG*GPDSVRSVHFM
Trigger: CATAAAGTGAACTGATCTTACCGAGTCAGGACCTCAGCCAGCTCTCAAGAGGTTCTGCTCAGCCTTAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
3UTR TCA 72 bp CAAGCAACTCAATCAAGGTCACAAAACAGGCATAGCTaGGACCAGAAGCCAAGTCTCCCTCTGCCTTCTTCA +
Preference number: 3 (lower is better)
Translates to: QATQSRSQNRHS*DQKPSLPLPSS
Trigger: TGAAGAAGGCAGAGGGAGACTTGGCTTCTGGTCTCAGCTATGCCTGTTTTGTGACCTTGATTGAGTTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 72 bp GAAGAAAGCATGTCAGTAACAGCAGAGTTGGTCTGGTaGCCAGTCAAGTGCCTTCCAACTCTGGTTCTTTCA +
Preference number: 3 (lower is better)
Translates to: EESMSVTAELVW*PVKCLPTLVLS
Trigger: TGAAAGAACCAGAGTTGGAAGGCACTTGACTGGCCACCAGACCAACTCTGCTGTTACTGACATGCTTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 72 bp GATGGGATTAGGAGAGCTGAGATTACAATTACAGAGTaGGAGGATGCCACCACTTCTAGCCAACCTGCAGAT +
Preference number: 3 (lower is better)
Translates to: DGIRRAEITITE*EDATTSSQPAD
Trigger: ATCTGCAGGTTGGCTAGAAGTGGTGGCATCCTCTCACTCTGTAATTGTAATCTCAGCTCTCCTAATCCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 72 bp TGTCACCAAATGGCAAGTGCATTACTAACCACACAGTaGTCCCAGTTTATCAGGCTGCAGCAGAACAAAGTC +
Preference number: 3 (lower is better)
Translates to: CHQMASALLTTQ*SQFIRLQQNKV
Trigger: GACTTTGTTCTGCTGCAGCCTGATAAACTGGGACCACTGTGTGGTTAGTAATGCACTTGCCATTTGGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CAA 90 bp AGTTTATCAGGCTGCAGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTATCAGTAACAGCAGAGTaGGTCTGGTGGCCAGTCAAG +
Preference number: 3 (lower is better)
Translates to: SLSGCSRTKSTSLSIRSLSVTAE*VWWPVK
Trigger: CTTGACTGGCCACCAGACCAACTCTGCTGTTACTGA...TAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCTGCAGCCTGATAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CAA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGCATCTAACCAGGGATTaGCCAACACATTTGTTAGTC +
Preference number: 3 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKHLTRD*PTHLLV
Trigger: GACTAACAAATGTGTTGGCAAATCCCTGGTTAGATG...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR TCA 72 bp AATATTGTCATTGCAGAGCATGGCTTCATCGATTGGTaGAAAATCGACGTGTTCATCTCAACACCAGGAAGT +
Preference number: 3 (lower is better)
Translates to: NIVIAEHGFIDW*KIDVFISTPGS
Trigger: ACTTCCTGGTGTTGAGATGAACACGTCGATTTTTCACCAATCGATGAAGCCATGCTCTGCAATGACAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CAA 90 bp AAAGAACTTGTCACAAGTTTGGGACATCAGGTTATGATAAAGATAGACACTAGAATCATTGTCACCTCTTaGACCAGCCTGTCTCCAACA +
Preference number: 3 (lower is better)
Translates to: KELVTSLGHQVMIKIDTRIIVTS*TSLSPT
Trigger: TGTTGGAGACAGGCTGGTCAAAGAGGTGACAATGAT...TCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CAA 90 bp AAAGAACTTGTCACAAGTTTGGGACATCAGGTTATGATAAAGATAGACACTAGAGCATGGCTTCATCGATaGGTGAAAAATCGACGTGTT +
Preference number: 3 (lower is better)
Translates to: KELVTSLGHQVMIKIDTRAWLHR*VKNRRV
Trigger: AACACGTCGATTTTTCACCAATCGATGAAGCCATGC...TCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CCA 72 bp AAAATAAATTGTCTCACTAACCTTGGCTCATCTCTTTaGCCTAGATTCTCCTGGGATTTACTTCAAGGAATG +
Preference number: 3 (lower is better)
Translates to: KINCLTNLGSSL*PRFSWDLLQGM
Trigger: CATTCCTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGAGACAATTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CAA 90 bp AAAGAACTTGTCACAAGTTTGGGACATCAGGTTATGATAAAGATAGACACTAGAACATTAATATTGTCATaGCAGAGCATGGCTTCATCG +
Preference number: 3 (lower is better)
Translates to: KELVTSLGHQVMIKIDTRTLILS*QSMASS
Trigger: CGATGAAGCCATGCTCTGCAATGACAATATTAATGT...TCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR-3UTR CAA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTGAACTTGTCACAAGTTaGGGACATCAGGTTATGATA +
Preference number: 3 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPELVTS*GHQVMI
Trigger: TATCATAACCTGATGTCCCAAACTTGTGACAAGTTC...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGAGCACCCAGCAAGGCTaGGCTCCGCCCCTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRSTQQG*APPLPR
Trigger: TCTTGGGAGGGGCGGAGCTCAGCCTTGCTGGGTGCT...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGCCCTTTCAGGGGTGCTaGCTCCCTTGCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRPFQGC*LPCPST
Trigger: GGTGGAGGGGCAAGGGAGTCAGCACCCCTGAAAGGG...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCAGGTAGGCATGGCTGCTaGCCCCAGCCCGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPGRHGC*PQPASA
Trigger: GGCGGAGGCGGGCTGGGGGCAGCAGCCATGCCTACC...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553935.6
CDS-3UTR GCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGGCATCCCCCGGGGACTaGAGCAGGGCAGAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRASPGD*SRAEKS
Trigger: AGACTTCTCTGCCCTGCTGCAGTCCCCGGGGGATGC...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGTGCTGGCGTTTTCCTTaGGGCCCTCCAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRCWRFP*GPPAAA
Trigger: GGCTGCAGCTGGAGGGCCCCAAGGAAAACGCCAGCA...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACGCGCCTCGTTTCCATTaGGGCCCCCGACCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNAPRFH*GPRPRA
Trigger: GGCACGGGGTCGGGGGCCTCAATGGAAACGAGGCGC...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACCCAGGTAGGCATGGCTaGTGCCCCCAGCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNPGRHG*CPQPQR
Trigger: CCGCTGGGGCTGGGGGCAGCAGCCATGCCTACCTGG...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556842.5
CDS-3UTR TCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGGACACCCAGGGCAAATaGTTGTGTTCCACCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRDTQGK*LCSTGS
Trigger: GCTGCCGGTGGAACACAATCATTTGCCCTGGGTGTC...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCAAGTGCTCCTGGCCCCTaGCCACTAGACGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPSAPGP*PLDASC
Trigger: GCAGGAGGCGTCTAGTGGGCAGGGGCCAGGAGCACT...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGGATGTCCCGGCAGTATaGCTCCCGCTGCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRDVPAV*LPLQDE
Trigger: TTCATCCTGCAGCGGGAGCCATACTGCCGGGACATC...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGAGTTTGCCCAGACCTTaGGTGCTGCCCTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RCGASCLWATACHHAAGGSLPRP*VLPWAA
Trigger: GGCGGCCCAGGGCAGCACCCAAGGTCTGGGCAAACT...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGCTACACGCCAGGTGGTaGTGCGCTCAGGTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRLHARW*CAQVRN
Trigger: GTTTCTCACCTGAGCGCACCACCACCTGGCGTGTAG...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 72 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTaGGGCGACAGCGTGCCATCATGCTGCTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSLSPALWCKLS*GDSVPSCCWRA
Trigger: GGCCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 72 bp CCATCCTCCGCCACTAATGCTGAGTTTGCCCAGACCTaGGGTGCTGCCCTGGGCCGCCGAGCCTTCATCCCT +
Preference number: 4 (lower is better)
Translates to: PSSATNAEFAQT*GAALGRRAFIP
Trigger: AGGGATGAAGGCTCGGCGGCCCAGGGCAGCACCCAAGGTCTGGGCAAACTCAGCATTAGTGGCGGAGGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGGCTCCCGCTGCAGGATaGAGTCCACTTTGTGATCCT +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRAPAAG*SPLCDP
Trigger: AGGATCACAAAGTGGACTTCATCCTGCAGCGGGAGC...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGCCTCAGACAGTTGGTTaGTGTCCCGGCAGTATGGCT +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRPQTVG*CPGSMA
Trigger: AGCCATACTGCCGGGACATCAACCAACTGTCTGAGG...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGGGAGGCGGCTGGAGCTaGCAGGGCGGCAGCCACTCA +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRGGGWS*QGGSHS
Trigger: TGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCC...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACGTCGTGGCAAGGGCCTaGGGCCTGTTCCTCACAGGC +
Preference number: 4 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNVVARA*GLFLTG
Trigger: GCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGAC...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGACCTGGCAGGAATCCTaGCCCATGCCCTTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRTWQES*PMPLKQ
Trigger: TTGCTTCAAGGGCATGGGTCAGGATTCCTGCCAGGT...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGTGCCAGTCACCAAGTTaGCCCCTCGGGCGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: RCGASCLWATACHHAAGGCQSPS*PLGRLV
Trigger: AACGAGGCGCCCGAGGGGGCAACTTGGTGACTGGCA...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGGCACAGCAATGGCAATaGCCCGGCTGGAGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRAQQWQ*PGWRSS
Trigger: ACTACTTCTCCAGCCGGGGCATTGCCATTGCTGTGC...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGCCAGGTAGGCATGGCTaGTGCCCCCAGCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILPGRHG*CPQPAS
Trigger: GGAGGCGGGCTGGGGGCAGCAGCCATGCCTACCTGG...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553935.6
CDS-3UTR CCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGGCCGTTTCGCCCCAGTaGGTCATCAGGTACCATGAA +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRAVSPQ*VIRYHE
Trigger: TTCATGGTACCTGATGACCCACTGGGGCGAAACGGC...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGCCTTTCGCCTGGGCCTaGGGGGCCCCATCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILPFAWA*GAPSAQ
Trigger: CTGAGCCGATGGGGCCCCCCAGGCCCAGGCGAAAGG...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp AGGTGGTGGTGCGCTCAGGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAAGCCACTGATCATCAGTaGGCCTGGCGCCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RWWCAQVRNGPGYQTGLEATDHQ*AWRPGH
Trigger: GTGCCCAGGGCGCCAGGCTCACTGATGATCAGTGGC...TTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCTGCCCCTCCACCCACTaGCTGTGGCCTGAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSCPSTH*LWPEGH
Trigger: GTGGCCCTCAGGCCACAGTCAGTGGGTGGAGGGGCA...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp CAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAAGCGCCTCGTTTCCATTaGGGCCCCCGACCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: QSQSPELIPSSSPHSLQKAPRFH*GPRPRA
Trigger: GGCACGGGGTCGGGGGCCTCAATGGAAACGAGGCGC...TTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGCTTTGGCATCCTTACTaGAGCGCCACTGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRLWHPY*SATEAQ
Trigger: TTGTGCCTCAGTGGCGCTTCAGTAAGGATGCCAAAG...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGGGAGGCGGCTGGAGCTaGCAGGGCGGCAGCCACTCA +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQGGGWS*QGGSHS
Trigger: TGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCC...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGAGCTGGCTGAGGTCCTaGCTCGGTAAGATCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRSWLRS*LGKISS
Trigger: TGAACTGATCTTACCGAGTCAGGACCTCAGCCAGCT...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACCCAGCTCAGCCGCTCTaGCAGCTCTTCTACCCGGCT +
Preference number: 4 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNPAQPL*QLFYPA
Trigger: AGCCGGGTAGAAGAGCTGGCAGAGCGGCTGAGCTGG...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGTCCTCGGGACTGAGCTaGCCTGTGACAGGAGCCATG +
Preference number: 4 (lower is better)
Translates to: RCGASCLWATACHHAAGGSSGLS*PVTGAM
Trigger: CATGGCTCCTGTCACAGGGCAGCTCAGTCCCGAGGA...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCCTCGGGACTGAGCTaGCCTGTGACAGGAGCCATG +
Preference number: 4 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPSSGLS*PVTGAM
Trigger: CATGGCTCCTGTCACAGGGCAGCTCAGTCCCGAGGA...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGCCCGACCCCGTGCCATaGCCTGCTGCTTGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWPDPVP*PAACLP
Trigger: GGGGAGACAAGCAGCAGGGCATGGCACGGGGTCGGG...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGCCAGACCTTGGGTGCTaGCCTGGGCCGCCGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWPDLGC*PGPPSL
Trigger: AAGGCTCGGCGGCCCAGGGCAGCACCCAAGGTCTGG...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGTCAAGGAAGAAGCCCTaGGCTCCCAGAAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRSRKKP*APRKMQ
Trigger: CTGCATCTTTCTGGGAGCCCAGGGCTTCTTCCTTGA...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCAAACAGAGCCTCTCTATaGGCATCCCCCGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPNRASL*ASPGDC
Trigger: GCAGTCCCCGGGGGATGCCCATAGAGAGGCTCTGTT...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCGTGCAGGTGGAGGGCTaGGCACCCTCGGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: AWRWSQQSQSPELIPSSSVQVEG*APSEER
Trigger: CCTCTCCTCCGAGGGTGCCCAGCCCTCCACCTGCAC...GCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACGTCTCCACAGTGCCATaGGGGTTCCGGTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNVSTVP*GFRCRW
Trigger: CCACCTGCACCGGAACCCCCATGGCACTGTGGAGAC...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGAGGGCCTCAGACAGTTaGTTGATGTCCCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRRASDS*LMSRQY
Trigger: ATACTGCCGGGACATCAACCAACTGTCTGAGGCCCT...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGCGCTCACCCCCACGCTaGAGATGCGCTCCACATGGG +
Preference number: 4 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWRSPPR*RCAPHG
Trigger: CCCATGTGGAGCGCATCTTCAGCGTGGGGGTGAGCG...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCACCCAGCAAGGCTaGGCTCCGCCCCTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSSTQQG*APPLPR
Trigger: TCTTGGGAGGGGCGGAGCTCAGCCTTGCTGGGTGCT...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGTGCCCCTCCACCCACTaGCTGTGGCCTGAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQCPSTH*LWPEGH
Trigger: GTGGCCCTCAGGCCACAGTCAGTGGGTGGAGGGGCA...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACCCTGCAGGGCCTCCTTaGAACGCTGTGTGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNPAGPP*NAVCQS
Trigger: TGACTGGCACACAGCGTTTCAAGGAGGCCCTGCAGG...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGACATCTGCCATAACTTaGCCAGACACAGTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRTSAIT*PDTVPP
Trigger: TGGGGGAACTGTGTCTGGTCAAGTTATGGCAGATGT...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACACGTGCACGGGGTCCTaGATGGAGTGGCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNTCTGS*MEWLHP
Trigger: AGGATGGAGCCACTCCATTCAGGACCCCGTGCACGT...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGGGGCTCCCAGAAAGATaGAGTGCAGTTTGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: RCGASCLWATACHHAAGGGLPER*SAVWAG
Trigger: ACCCGCCCAAACTGCACTGCATCTTTCTGGGAGCCC...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACCCACTAGACGCCTCCTaGACCAGACTCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNPLDAS*TRLSSS
Trigger: GGAGCTGCTGAGTCTGGTGCAGGAGGCGTCTAGTGG...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp GCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCAGTGCTCCTGGCCCCTaGCCACTAGACGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AWRWSQQSQSPELIPSSSSAPGP*PLDASC
Trigger: GCAGGAGGCGTCTAGTGGGCAGGGGCCAGGAGCACT...GCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCAGTAAGTGTCTCCCCTTaGTCCCCTGCAATCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPVSVSP*SPAISG
Trigger: CCCGGAGATTGCAGGGGAGCAAGGGGAGACACTTAC...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTCCCCGGTCTCCACAGTaGCATGGGGGTTCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: QSPELIPSSSPHSLQKPCPRSPQ*HGGSGA
Trigger: TGCACCGGAACCCCCATGGCACTGTGGAGACCGGGG...ACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCCCCCGGTCTCCACAGTaGCATGGGGGTTCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSPRSPQ*HGGSGA
Trigger: TGCACCGGAACCCCCATGGCACTGTGGAGACCGGGG...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGCCCCGGTCTCCACAGTaGCATGGGGGTTCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRPRSPQ*HGGSGA
Trigger: TGCACCGGAACCCCCATGGCACTGTGGAGACCGGGG...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGCCCCGTGCCATGCCCTaGTGCTTGTCTCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILPRAMP*CLSPLS
Trigger: GGACAGGGGAGACAAGCAGCAGGGCATGGCACGGGG...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGCCCCGTGCCATGCCCTaGTGCTTGTCTCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELEPRAMP*CLSPLS
Trigger: GGACAGGGGAGACAAGCAGCAGGGCATGGCACGGGG...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGACCCGACCCCGTGCCATaGCCTGCTGCTTGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRPDPVP*PAACLP
Trigger: GGGGAGACAAGCAGCAGGGCATGGCACGGGGTCGGG...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp CAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTTGGGCCACATGCTGCTaGCCTTTCGCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QSPELIPSSSPHSLQKPCWATCC*PFAWAW
Trigger: CCAGGCCCAGGCGAAAGGGCAGCAGCATGTGGCCCA...ACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGACTCCTTGGCTCTGCTaGCGTTTTCCTTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RCGASCLWATACHHAAGGTPWLC*RFPWGP
Trigger: AGGGCCCCAAGGAAAACGCCAGCAGAGCCAAGGAGT...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGGTGAGCCTGGCGCCCTaGGCACCAGATGGGCTGACG +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQVSLAP*APDGLT
Trigger: CGTCAGCCCATCTGGTGCCCAGGGCGCCAGGCTCAC...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGAGAGGCTCCGGAAGATaGTCCTGGCGTGAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: RCGASCLWATACHHAAGGRGSGR*SWREVP
Trigger: TGGGACTTCACGCCAGGACCATCTTCCGGAGCCTCT...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCCCATTGTGGAGCCGCTaGAGGAGGGAGGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSPLWSR*RREAPR
Trigger: CCGAGGAGCCTCCCTCCTCCAGCGGCTCCACAATGG...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGGATGTCCCGGCAGTATaGCTCCCGCTGCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: RCGASCLWATACHHAAGGDVPAV*LPLQDE
Trigger: TTCATCCTGCAGCGGGAGCCATACTGCCGGGACATC...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCTCCCTCTGCCTTCTTCACTAGCTCACTCCACCCTATCGTGGCCCAGTCCACAAGTTTGCCCAGACCTTaGGTGCTGCCCTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SPSAFFTSSLHPIVAQSTSLPRP*VLPWAA
Trigger: GGCGGCCCAGGGCAGCACCCAAGGTCTGGGCAAACT...TGTGGACTGGGCCACGATAGGGTGGAGTGAGCTAGTGAAGAAGGCAGAGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGGTGGTGGTGCGCTCAGGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAAGCACGGGGTCCTGAATaGAGTGGCTCCATCCTCCGC +
Preference number: 4 (lower is better)
Translates to: RWWCAQVRNGPGYQTGLEARGPE*SGSILR
Trigger: GCGGAGGATGGAGCCACTCCATTCAGGACCCCGTGC...TTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGGCTGGGCCGTGGGGGTaGTGCCATGGGCCACATGCT +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSEAGPWG*CHGPHA
Trigger: AGCATGTGGCCCATGGCACCACCCCCACGGCCCAGC...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCCTTCAAGGCTGAGAGGACCCCTGTACCTTCCCTCTTTCCTGCTCTAGGGGTTGCTGGGCCGTGGGGGTaGTGCCATGGGCCACATGCT +
Preference number: 4 (lower is better)
Translates to: SFKAERTPVPSLFPALGVAGPWG*CHGPHA
Trigger: AGCATGTGGCCCATGGCACCACCCCCACGGCCCAGC...AACCCCTAGAGCAGGAAAGAGGGAAGGTACAGGGGTCCTCTCAGCCTTGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 72 bp CCTTCCACGCTCCCAGGAGCTCAGCAAGGGAGCATCTaGTTCTCTGGCCATCCAGAGCAGCAGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PSTLPGAQQGSI*FSGHPEQQPGR
Trigger: TCTCCCTGGCTGCTGCTCTGGATGGCCAGAGAACAAGATGCTCCCTTGCTGAGCTCCTGGGAGCGTGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGACGCTCACCCCCACGCTaGAGATGCGCTCCACATGGG +
Preference number: 4 (lower is better)
Translates to: PSSSPHSLQKPCAKAKLRRSPPR*RCAPHG
Trigger: CCCATGTGGAGCGCATCTTCAGCGTGGGGGTGAGCG...TCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp CAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAAGCCACTGATCATCAGTaGGCCTGGCGCCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QSQSPELIPSSSPHSLQKATDHQ*AWRPGH
Trigger: GTGCCCAGGGCGCCAGGCTCACTGATGATCAGTGGC...TTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp CAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAAAGCACCCAGCAAGGCTaGGCTCCGCCCCTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: QSQSPELIPSSSPHSLQKSTQQG*APPLPR
Trigger: TCTTGGGAGGGGCGGAGCTCAGCCTTGCTGGGTGCT...TTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGCCCTTTCAGGGGTGCTaGCTCCCTTGCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQPFQGC*LPCPST
Trigger: GGTGGAGGGGCAAGGGAGTCAGCACCCCTGAAAGGG...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGAGCTTTTGCAGGAAGTaGCTCTCTCTGACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRSFCRK*LSLTLA
Trigger: TGCCAAAGTCAGAGAGAGTCACTTCCTGCAAAAGCT...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGAGCCACTCAAGCAGGTaGGGCTCAAAAGTTAAGACT +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRSHSSR*GSKVKT
Trigger: AGTCTTAACTTTTGAGCCTCACCTGCTTGAGTGGCT...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGTCTCACAGAAAGGGCTaGGCTGGAGGCGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRSHRKG*AGGGWS
Trigger: GCTCCAGCCGCCTCCAGCTCAGCCCTTTCTGTGAGA...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGTCTCACAGAAAGGGCTaGGCTGGAGGCGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELESHRKG*AGGGWS
Trigger: GCTCCAGCCGCCTCCAGCTCAGCCCTTTCTGTGAGA...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGGTCGTGGCAAGGGCCTaGGGCCTGTTCCTCACAGGC +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQVVARA*GLFLTG
Trigger: GCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGAC...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCATCCCCCGGGGACTaGAGCAGGGCAGAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: QSPELIPSSSPHSLQKPCASPGD*SRAEKS
Trigger: AGACTTCTCTGCCCTGCTGCAGTCCCCGGGGGATGC...ACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGACAGCCAGGGGCAACTaGAACAGAGCCTCTCTATGG +
Preference number: 4 (lower is better)
Translates to: RCGASCLWATACHHAAGGTARGN*NRASLW
Trigger: CCATAGAGAGGCTCTGTTGCAGTTGCCCCTGGCTGT...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGGCCCCCGACCCCGTaGCATGCCCTGCTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVRPPTP*HALLLV
Trigger: GACAAGCAGCAGGGCATGGCACGGGGTCGGGGGCCT...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCAGCACAGCAATGGCAATaGCCCGGCTGGAGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPAQQWQ*PGWRSS
Trigger: ACTACTTCTCCAGCCGGGGCATTGCCATTGCTGTGC...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGGCGTTCTCTGATGATTaGCATCCACTTCTCAGACTC +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRAFSDD*HPLLRL
Trigger: GAGTCTGAGAAGTGGATGGCAATCATCAGAGAACGC...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR GCA 90 bp CATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCAGAAGTCAGGGCCTGGTGCCATGGGCCACATaGTGCTGCCCTTTCGCCTGG +
Preference number: 4 (lower is better)
Translates to: HAVFNSLCHSEGGRSQGLVPWAT*CCPFAW
Trigger: CCAGGCGAAAGGGCAGCAGCATGTGGCCCATGGCAC...CAGGCCCTGACTTCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGGTGCCATGGGCCACATaGTGCTGCCCTTTCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELEVPWAT*CCPFAW
Trigger: CCAGGCGAAAGGGCAGCAGCATGTGGCCCATGGCAC...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGTGCTGGCGTTTTCCTTaGGGCCCTCCAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELECWRFP*GPPAAA
Trigger: GGCTGCAGCTGGAGGGCCCCAAGGAAAACGCCAGCA...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGTTCATCCTGCAGTTCTaGGCTGCAGAGGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: RCGASCLWATACHHAAGGFILQF*AAEALQ
Trigger: CTGAAGGGCCTCTGCAGCCCAGAACTGCAGGATGAA...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGAGATGCAGTGCAGTTTaGGCGGGTAGTGGATTTCAT +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRRCSAV*AGSGFH
Trigger: ATGAAATCCACTACCCGCCCAAACTGCACTGCATCT...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGAGAAGCCAGTGCTCCTaGCCCCTGCCCACTAGACGC +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELERSQCS*PLPTRR
Trigger: GCGTCTAGTGGGCAGGGGCCAGGAGCACTGGCTTCT...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACCCCAATCCATCTCCCTaGGACCACCCTGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNPNPSP*DHPVSL
Trigger: GAGGGAAACAGGGTGGTCCCAGGGAGATGGATTGGG...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCCCGGGAGGCTCACGGTaGACACAGAACCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSPGGSR*TQNPPP
Trigger: AGGAGGAGGGTTCTGTGTCCACCGTGAGCCTCCCGG...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGTGGCGGAGGTCTGGCTaGCCAGGCACATTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRWRRSG*PGTLAR
Trigger: CCTTGCCAATGTGCCTGGCCAGCCAGACCTCCGCCA...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGAAGACCCCTGTGTCCTaGCTGGCTTCTTCAGAAATT +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRKTPVS*LASSEI
Trigger: AATTTCTGAAGAAGCCAGCCAGGACACAGGGGTCTT...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGGCACGGGGTCCTGAATaGAGTGGCTCCATCCTCCGC +
Preference number: 4 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWARGPE*SGSILR
Trigger: GCGGAGGATGGAGCCACTCCATTCAGGACCCCGTGC...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGCAGGGGGCCCGAATCTaGGCGGGCCTTCCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: HFMDLSQSGFPDPKHQLRQGARI*AGLPGF
Trigger: GAACCCGGGAAGGCCCGCCCAGATTCGGGCCCCCTG...CCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553935.6
CDS-3UTR TCA 90 bp CACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGCCAGCAGGGCTGCCCTaGAGCTCTGGCTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: HFMDLSQSGFPDPKHQLRPAGLP*SSGCSP
Trigger: AGGGCTGCAGCCAGAGCTTCAGGGCAGCCCTGCTGG...CCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251343.9
CDS-3UTR TCA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGCCCGGCTCTGAGCCATaGCAAAGGCTTCAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILPGSEP*QRLQSG
Trigger: GCCTGACTGAAGCCTTTGTCATGGCTCAGAGCCGGG...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp GCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCGGCTCTGAGCCATaGCAAAGGCTTCAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: AWRWSQQSQSPELIPSSSPGSEP*QRLQSG
Trigger: GCCTGACTGAAGCCTTTGTCATGGCTCAGAGCCGGG...GCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp ACTCAGTCAACCAGGGCCCTTAGCACAAAAGGGCAGAAGACACTTTTGGTCTACGCGCCTCGTTTCCATTaGGGCCCCCGACCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: TQSTRALSTKGQKTLLVYAPRFH*GPRPRA
Trigger: GGCACGGGGTCGGGGGCCTCAATGGAAACGAGGCGC...GTAGACCAAAAGTGTCTTCTGCCCTTTTGTGCTAAGGGCCCTGGTTGACTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGCCTGCAGGGCCTCCTTaGAACGCTGTGTGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELEPAGPP*NAVCQS
Trigger: TGACTGGCACACAGCGTTTCAAGGAGGCCCTGCAGG...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp GCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCGCCATCCATGACTCGTaGGGGTGTGAGGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: AWRWSQQSQSPELIPSSSAIHDS*GCEGEQ
Trigger: CTGCTCTCCCTCACACCCTCACGAGTCATGGATGGC...GCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCGCCATCCATGACTCGTaGGGGTGTGAGGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSAIHDS*GCEGEQ
Trigger: CTGCTCTCCCTCACACCCTCACGAGTCATGGATGGC...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACGCTCCCGCTGCAGGATaGAGTCCACTTTGTGATCCT +
Preference number: 4 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNAPAAG*SPLCDP
Trigger: AGGATCACAAAGTGGACTTCATCCTGCAGCGGGAGC...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp TCCTTCAAGGCTGAGAGGACCCCTGTACCTTCCCTCTTTCCTGCTCTAGGGGTTTCTCACAGAAAGGGCTaGGCTGGAGGCGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SFKAERTPVPSLFPALGVSHRKG*AGGGWS
Trigger: GCTCCAGCCGCCTCCAGCTCAGCCCTTTCTGTGAGA...AACCCCTAGAGCAGGAAAGAGGGAAGGTACAGGGGTCCTCTCAGCCTTGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TCTCCCTCTGCCTTCTTCACTAGCTCACTCCACCCTATCGTGGCCCAGTCCACAACGTGCACGGGGTCCTaGATGGAGTGGCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: SPSAFFTSSLHPIVAQSTTCTGS*MEWLHP
Trigger: AGGATGGAGCCACTCCATTCAGGACCCCGTGCACGT...TGTGGACTGGGCCACGATAGGGTGGAGTGAGCTAGTGAAGAAGGCAGAGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAAGGTGGTGCGCTCAGGTaGGAAACGGGCCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: QSQSPELIPSSSPHSLQKGGALR*ETGLGI
Trigger: GATACCCAGGCCCGTTTCTCACCTGAGCGCACCACC...TTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGGGTAGGCATGGCTGCTaGCCCCAGCCCATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQGRHGC*PQPMFS
Trigger: GGAGAACATGGGCTGGGGGCAGCAGCCATGCCTACC...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251343.9
CDS-3UTR GCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGGCATCCCCCGGGGACTaGAGCAGGGCAGAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQASPGD*SRAEKS
Trigger: AGACTTCTCTGCCCTGCTGCAGTCCCCGGGGGATGC...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGCCACTAGACGCCTCCTaGACCAGACTCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELEPLDAS*TRLSSS
Trigger: GGAGCTGCTGAGTCTGGTGCAGGAGGCGTCTAGTGG...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGTCCTCGGGACTGAGCTaGCCTGTGACAGGAGCCATG +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRSSGLS*PVTGAM
Trigger: CATGGCTCCTGTCACAGGGCAGCTCAGTCCCGAGGA...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp TTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCCGACCCCGTGCCATaGCCTGCTGCTTGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: FMDLSQSGFPDPKHQLRVPDPVP*PAACLP
Trigger: GGGGAGACAAGCAGCAGGGCATGGCACGGGGTCGGG...CACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp TCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAAGTAGGCCCCCGACCCCGTaGCATGCCCTGCTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SSSPHSLQKPCAKAKLRSRPPTP*HALLLV
Trigger: GACAAGCAGCAGGGCATGGCACGGGGTCGGGGGCCT...ACTTCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp CCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGATGCCAGTCACCAAGTTaGCCCCTCGGGCGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: PSSSPHSLQKPCAKAKLRCQSPS*PLGRLV
Trigger: AACGAGGCGCCCGAGGGGGCAACTTGGTGACTGGCA...TCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAAACACCTCCAGCAGCTaGCGCCGGAGCCGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRNTSSS*RRSRSV
Trigger: AACAGAGCGGCTCCGGCGGCAGCTGCTGGAGGTGTT...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR GCA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACAGCACCAACTCAGGGTaGCTCTGGATCAGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNSTNSG*LWIRVS
Trigger: GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCT...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGCCCAGTTTATCAGGCTaGAGCAGAACAAAGTCAACA +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRPSLSG*SRTKST
Trigger: TGTTGACTTTGTTCTGCTGCAGCCTGATAAACTGGG...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp ATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGCTTTGGGCGACAGCGTaGCATCATGCTGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: IPQRTLATGYQYSFPELGLWATA*HHAAGG
Trigger: CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAG...CCCTAGCTCTGGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCCTTTGGGCGACAGCGTaGCATCATGCTGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSLWATA*HHAAGG
Trigger: CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAG...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCTCCCTCTGCCTTCTTCACTAGCTCACTCCACCCTATCGTGGCCCAGTCCACAAGCTGCAGCCAGATGTaGGGGTTGTCCGGACAGTCC +
Preference number: 4 (lower is better)
Translates to: SPSAFFTSSLHPIVAQSTSCSQM*GLSGQS
Trigger: GGACTGTCCGGACAACCCCCACATCTGGCTGCAGCT...TGTGGACTGGGCCACGATAGGGTGGAGTGAGCTAGTGAAGAAGGCAGAGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGTGCTGGCGTTTTCCTTaGGGCCCTCCAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQCWRFP*GPPAAA
Trigger: GGCTGCAGCTGGAGGGCCCCAAGGAAAACGCCAGCA...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCAAGGAAGAAGCCCTaGGCTCCCAGAAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPSRKKP*APRKMQ
Trigger: CTGCATCTTTCTGGGAGCCCAGGGCTTCTTCCTTGA...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGGCCCTGGGCACCAGATaGGCTGACGTGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: FMDLSQSGFPDPKHQLRVALGTR*ADVLQA
Trigger: GGCCTGGAGCACGTCAGCCCATCTGGTGCCCAGGGC...CACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGGAGGCATTCCCATTGTaGAGCCGCTGGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQREAFPL*SRWRRE
Trigger: CTCCCTCCTCCAGCGGCTCCACAATGGGAATGCCTC...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGTCTCCACAGTGCCATaGGGGTTCCGGTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRVSTVP*GFRCRW
Trigger: CCACCTGCACCGGAACCCCCATGGCACTGTGGAGAC...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCCAGAAAGGGCTGAGCTaGAGGCGGCTGGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSQKGLS*RRLELT
Trigger: TGTCAGCTCCAGCCGCCTCCAGCTCAGCCCTTTCTG...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGGATCAGTTCACTTTATaGACCTGTCCCAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRDQFTL*TCPKVA
Trigger: AGCCACTTTGGGACAGGTCCATAAAGTGAACTGATC...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACCACCCTAGCTCAGCTTaGAGGTGGAGCCAACAGTCT +
Preference number: 4 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNHPSSA*RWSQQS
Trigger: AGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTG...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGCCTTGGGTGCTGCCCTaGGCCGCCGAGCCTTCATCC +
Preference number: 4 (lower is better)
Translates to: HFMDLSQSGFPDPKHQLRPWVLP*AAEPSS
Trigger: GGATGAAGGCTCGGCGGCCCAGGGCAGCACCCAAGG...CCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGGGTTGTGCTGGGCCGTaGGGGTGGTGCCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: FMDLSQSGFPDPKHQLRVGCAGP*GWCHGP
Trigger: TGGCCCATGGCACCACCCCCACGGCCCAGCACAACC...CACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCGGGCACCAGATGGGCTaGCGTGCTCCAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLGHQMG*RAPGQA
Trigger: TGCCTGGCCTGGAGCACGTCAGCCCATCTGGTGCCC...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp TTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGGCCACTGATCATCAGTaGGCCTGGCGCCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: FMDLSQSGFPDPKHQLRVATDHQ*AWRPGH
Trigger: GTGCCCAGGGCGCCAGGCTCACTGATGATCAGTGGC...CACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGCCCGGCTCTGAGCCATaGCAAAGGCTTCAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQPGSEP*QRLQSG
Trigger: GCCTGACTGAAGCCTTTGTCATGGCTCAGAGCCGGG...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp CCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAGCCATCCATGACTCGTaGGGGTGTGAGGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PSSSPHSLQKPCAKAKLRAIHDS*GCEGEQ
Trigger: CTGCTCTCCCTCACACCCTCACGAGTCATGGATGGC...TCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp TGTTCTGTTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCATCAGGTTGGGACGGAGGCGGCTGGAGCTaGCAGGGCGGCAGCCACTCA +
Preference number: 4 (lower is better)
Translates to: CSVAPPYCLKAVISSGWDGGGWS*QGGSHS
Trigger: TGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCC...GTCCCAACCTGATGAGATTACGGCCTTGAGACAATAAGGTGGAGCAACAGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGGGGCTCCTTCAAGGCTaGGAGGACCCCTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSEGLLQG*EDPCTF
Trigger: GAAGGTACAGGGGTCCTCTCAGCCTTGAAGGAGCCC...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAAGGGCCAGAGAAGGTaGGGCCAAGGGGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVKGQRR*GQGEPP
Trigger: TGGAGGCTCCCCTTGGCCTCACCTTCTCTGGCCCTT...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGGGTACTCCTTGGCTCTaGTGGCGTTTTCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELEGTPWL*WRFPWG
Trigger: GCCCCAAGGAAAACGCCAGCAGAGCCAAGGAGTACC...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp CATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCAGAAGTCAGGGCCTGGGGCTCCCAGAAAGATaGAGTGCAGTTTGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: HAVFNSLCHSEGGRSQGLGLPER*SAVWAG
Trigger: ACCCGCCCAAACTGCACTGCATCTTTCTGGGAGCCC...CAGGCCCTGACTTCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGGGGCTCCCAGAAAGATaGAGTGCAGTTTGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELEGLPER*SAVWAG
Trigger: ACCCGCCCAAACTGCACTGCATCTTTCTGGGAGCCC...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCCAGATGGGCTGACGTaGTCCAGGCCAGGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSEPDGLT*SRPGSQ
Trigger: TTGACTGCCTGGCCTGGAGCACGTCAGCCCATCTGG...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCGTAAGTGTCTCCCCTTaGTCCCCTGCAATCTCCGGG +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSVSVSP*SPAISG
Trigger: CCCGGAGATTGCAGGGGAGCAAGGGGAGACACTTAC...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp CACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGCCCCGTGCCATGCCCTaGTGCTTGTCTCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: HFMDLSQSGFPDPKHQLRPRAMP*CLSPLS
Trigger: GGACAGGGGAGACAAGCAGCAGGGCATGGCACGGGG...CCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAACACCTCCAGCAGCTaGCGCCGGAGCCGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVNTSSS*RRSRSV
Trigger: AACAGAGCGGCTCCGGCGGCAGCTGCTGGAGGTGTT...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR GCA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACGTCCACATAACACTGTaGCAGGGCCTAGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNVHITL*QGLASP
Trigger: AGGAGATGCTAGGCCCTGGCACAGTGTTATGTGGAC...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCAGAAGTCAGGGCCTGCGGTTAGAGAGCCTGTaGAGCCACAGGCAGACACAC +
Preference number: 4 (lower is better)
Translates to: HAVFNSLCHSEGGRSQGLRLESL*SHRQTH
Trigger: GTGTGTCTGCCTGTGGCTGCACAGGCTCTCTAACCG...CAGGCCCTGACTTCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGAAGATGCGCTCCACATaGGGCTGCTGTTCCCGAACC +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRKMRST*GCCSRT
Trigger: GGTTCGGGAACAGCAGCCCCATGTGGAGCGCATCTT...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCAGAAGTCAGGGCCTGAAGATGCGCTCCACATaGGGCTGCTGTTCCCGAACC +
Preference number: 4 (lower is better)
Translates to: HAVFNSLCHSEGGRSQGLKMRST*GCCSRT
Trigger: GGTTCGGGAACAGCAGCCCCATGTGGAGCGCATCTT...CAGGCCCTGACTTCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGTCCGGAAGATGGTCCTaGCGTGAAGTCCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRSGRWS*REVPAQ
Trigger: CTGAGCTGGGACTTCACGCCAGGACCATCTTCCGGA...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAAACAGAGCCTCTCTATaGGCATCCCCCGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRNRASL*ASPGDC
Trigger: GCAGTCCCCGGGGGATGCCCATAGAGAGGCTCTGTT...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGCCATTGTGGAGCCGCTaGAGGAGGGAGGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: HFMDLSQSGFPDPKHQLRPLWSR*RREAPR
Trigger: CCGAGGAGCCTCCCTCCTCCAGCGGCTCCACAATGG...CCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp AGAACAGAACCCAGGGGCACCTGTCCTACTTCTTTATCTGGTCTTGGATTCCAGGTGCAGGTGGAGGGCTaGGCACCCTCGGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RTEPRGTCPTSLSGLGFQVQVEG*APSEER
Trigger: CCTCTCCTCCGAGGGTGCCCAGCCCTCCACCTGCAC...CTGGAATCCAAGACCAGATAAAGAAGTAGGACAGGTGCCCCTGGGTTCTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GAGTTCCTCCAGGGAAGGAACGCTTCAGGTCATGGAGAAGTTCAAGGGGAAAATGTGCAGGTGGAGGGCTaGGCACCCTCGGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: EFLQGRNASGHGEVQGENVQVEG*APSEER
Trigger: CCTCTCCTCCGAGGGTGCCCAGCCCTCCACCTGCAC...ATTTTCCCCTTGAACTTCTCCATGACCTGAAGCGTTCCTTCCCTGGAGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGGTGGTGGTGCGCTCAGGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAACCGTCAATGACAATATaGCGGAGGTCTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RWWCAQVRNGPGYQTGLEPSMTI*RRSGWP
Trigger: TGGCCAGCCAGACCTCCGCCATATTGTCATTGACGG...TTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAATGGCAATGCCCCGGCTaGAGAAGTAGTGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: QSQSPELIPSSSPHSLQKWQCPG*RSSAGG
Trigger: GCCTCCAGCACTACTTCTCCAGCCGGGGCATTGCCA...TTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGGAAATTCATCCAGGGTaGGGCCGTTTCGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQREIHPG*GRFAPV
Trigger: CACTGGGGCGAAACGGCCCCACCCTGGATGAATTTC...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGGAAATTCATCCAGGGTaGGGCCGTTTCGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWEIHPG*GRFAPV
Trigger: CACTGGGGCGAAACGGCCCCACCCTGGATGAATTTC...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCGAAATTCATCCAGGGTaGGGCCGTTTCGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSEIHPG*GRFAPV
Trigger: CACTGGGGCGAAACGGCCCCACCCTGGATGAATTTC...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp ATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGGATGTCCCGGCAGTATaGCTCCCGCTGCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: IPQRTLATGYQYSFPELGDVPAV*LPLQDE
Trigger: TTCATCCTGCAGCGGGAGCCATACTGCCGGGACATC...CCCTAGCTCTGGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGATGTCCCGGCAGTATaGCTCCCGCTGCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: QSPELIPSSSPHSLQKPCDVPAV*LPLQDE
Trigger: TTCATCCTGCAGCGGGAGCCATACTGCCGGGACATC...ACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGACAGAAAGGGCTGAGCTaGAGGCGGCTGGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRQKGLS*RRLELT
Trigger: TGTCAGCTCCAGCCGCCTCCAGCTCAGCCCTTTCTG...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp CAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAACACCTGCCCCCAGCCTaGGTCAGTATGGTACAGTGG +
Preference number: 4 (lower is better)
Translates to: QSQSPELIPSSSPHSLQKHLPPA*VSMVQW
Trigger: CCACTGTACCATACTGACCCAGGCTGGGGGCAGGTG...TTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCAGAAGTCAGGGCCTGAGCCTAAGTAGGTCGTaGCAAGGGCCTGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: HAVFNSLCHSEGGRSQGLSLSRS*QGPEAC
Trigger: ACAGGCCTCAGGCCCTTGCCACGACCTACTTAGGCT...CAGGCCCTGACTTCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCCTTCAAGGCTGAGAGGACCCCTGTACCTTCCCTCTTTCCTGCTCTAGGGGTTCTCTCCCCAGCGCTGTaGTGCAAGCTGTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: SFKAERTPVPSLFPALGVLSPAL*CKLSLG
Trigger: GCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAG...AACCCCTAGAGCAGGAAAGAGGGAAGGTACAGGGGTCCTCTCAGCCTTGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCTCTCCCCAGCGCTGTaGTGCAAGCTGTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSELSPAL*CKLSLG
Trigger: GCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAG...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGGTGGTGGTGCGCTCAGGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGCAGCCAGGCTTCCTaGAGATTCTACACGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RWWCAQVRNGPGYQTGLECSQAS*RFYTPG
Trigger: ACCTGGCGTGTAGAATCTCCAGGAAGCCTGGCTGCA...TTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCCGCTCACCCCCACGCTaGAGATGCGCTCCACATGGG +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLRSPPR*RCAPHG
Trigger: CCCATGTGGAGCGCATCTTCAGCGTGGGGGTGAGCG...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGACTTCAGTCAGGCCACTaGTCATCAGTGAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRLQSGH*SSVSLA
Trigger: CGCCAGGCTCACTGATGATCAGTGGCCTGACTGAAG...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGCGTTGCTGCCGTCAATaGCAATATGGCGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILRCCRQ*QYGGGL
Trigger: CAGACCTCCGCCATATTGTCATTGACGGCAGCAACG...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCCCCTGGAAGGATGCTaGGCCTTAGAAGACCCCTGT +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSEPLEGC*ALEDPC
Trigger: ACAGGGGTCTTCTAAGGCTCAGCATCCTTCCAGGGG...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGACCCCTGGAAGGATGCTaGGCCTTAGAAGACCCCTGT +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRPLEGC*ALEDPC
Trigger: ACAGGGGTCTTCTAAGGCTCAGCATCCTTCCAGGGG...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp TCTCCCTCTGCCTTCTTCACTAGCTCACTCCACCCTATCGTGGCCCAGTCCACAGCTCCCGCTGCAGGATaGAGTCCACTTTGTGATCCT +
Preference number: 4 (lower is better)
Translates to: SPSAFFTSSLHPIVAQSTAPAAG*SPLCDP
Trigger: AGGATCACAAAGTGGACTTCATCCTGCAGCGGGAGC...TGTGGACTGGGCCACGATAGGGTGGAGTGAGCTAGTGAAGAAGGCAGAGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCGCTCCCGCTGCAGGATaGAGTCCACTTTGTGATCCT +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSAPAAG*SPLCDP
Trigger: AGGATCACAAAGTGGACTTCATCCTGCAGCGGGAGC...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGGTGCTAAGGCAAAGTTaGGAAGTTAAGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: RCGASCLWATACHHAAGGVLRQS*EVKAEQ
Trigger: CTGCTCAGCCTTAACTTCTCAACTTTGCCTTAGCAC...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGACAGGCAGACACACCTaGGACTTGGTCCAAGCACCT +
Preference number: 4 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWTGRHT*DLVQAP
Trigger: AGGTGCTTGGACCAAGTCTCAGGTGTGTCTGCCTGT...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGGACTTGCCTCTCATCTaGCTGGGGCCACTCAGTCAA +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRDLPLI*LGPLSQ
Trigger: TTGACTGAGTGGCCCCAGTCAGATGAGAGGCAAGTC...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCAGCAGATGAGAAGGTGTaGGGTCTTAAAGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPADEKV*GLKDSH
Trigger: ATGGCTGTCTTTAAGACCTCACACCTTCTCATCTGC...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAAGTGGTGGTGCGCTCAGGTaGGAAACGGGCCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: SSSPHSLQKPCAKAKLRSGGALR*ETGLGI
Trigger: GATACCCAGGCCCGTTTCTCACCTGAGCGCACCACC...ACTTCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGGACACCCAGGGCAAATaGTTGTGTTCCACCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQDTQGK*LCSTGS
Trigger: GCTGCCGGTGGAACACAATCATTTGCCCTGGGTGTC...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAAGTAGGTCCAGCCCTCAGTaGTGTCCCATCCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SSSPHSLQKPCAKAKLRSRSSPQ*CPIQQG
Trigger: GCCCTGCTGGATGGGACAGCACTGAGGGCTGGACCT...ACTTCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251343.9
CDS-3UTR GCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGTACTCCTTGGCTCTaGTGGCGTTTTCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRGTPWL*WRFPWG
Trigger: GCCCCAAGGAAAACGCCAGCAGAGCCAAGGAGTACC...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp TCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAAGTCCAGCTCAGCCGCTCTaGCAGCTCTTCTACCCGGCT +
Preference number: 4 (lower is better)
Translates to: SSSPHSLQKPCAKAKLRSPAQPL*QLFYPA
Trigger: AGCCGGGTAGAAGAGCTGGCAGAGCGGCTGAGCTGG...ACTTCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGGTAAGTGTCTCCCCTTaGTCCCCTGCAATCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSEVSVSP*SPAISG
Trigger: CCCGGAGATTGCAGGGGAGCAAGGGGAGACACTTAC...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp GCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCAGGGTGAAAGGATCCTaGAGGGCCTCCTTGAAACGC +
Preference number: 4 (lower is better)
Translates to: AWRWSQQSQSPELIPSSSRVKGS*RASLKR
Trigger: GCGTTTCAAGGAGGCCCTGCAGGATCCTTTCACCCT...GCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp TTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGAACACCTCCAGCAGCTaGCGCCGGAGCCGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: FMDLSQSGFPDPKHQLRVNTSSS*RRSRSV
Trigger: AACAGAGCGGCTCCGGCGGCAGCTGCTGGAGGTGTT...CACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp ATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGAGCACCAACTCAGGGTaGCTCTGGATCAGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: IPQRTLATGYQYSFPELGSTNSG*LWIRVS
Trigger: GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCT...CCCTAGCTCTGGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TCCTTCAAGGCTGAGAGGACCCCTGTACCTTCCCTCTTTCCTGCTCTAGGGGTTTGTCTCCAACACACCTaGCCCCAGCCTGGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: SFKAERTPVPSLFPALGVCLQHT*PQPGSV
Trigger: TACTGACCCAGGCTGGGGGCAGGTGTGTTGGAGACA...AACCCCTAGAGCAGGAAAGAGGGAAGGTACAGGGGTCCTCTCAGCCTTGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGTCCCCAGCGCTGTGGTaGAAGCTGTCTTTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVSPALW*KLSLGD
Trigger: GTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGA...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAAAGATGCGCTCCACATaGGGCTGCTGTTCCCGAACC +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRKMRST*GCCSRT
Trigger: GGTTCGGGAACAGCAGCCCCATGTGGAGCGCATCTT...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAACTCCTTGGCTCTGCTaGCGTTTTCCTTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRTPWLC*RFPWGP
Trigger: AGGGCCCCAAGGAAAACGCCAGCAGAGCCAAGGAGT...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGACTCCTTGGCTCTGCTaGCGTTTTCCTTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSETPWLC*RFPWGP
Trigger: AGGGCCCCAAGGAAAACGCCAGCAGAGCCAAGGAGT...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGTTCATCCTGCAGTTCTaGGCTGCAGAGGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILFILQF*AAEALQ
Trigger: CTGAAGGGCCTCTGCAGCCCAGAACTGCAGGATGAA...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGTTCATCCTGCAGTTCTaGGCTGCAGAGGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRFILQF*AAEALQ
Trigger: CTGAAGGGCCTCTGCAGCCCAGAACTGCAGGATGAA...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGAGATGCAGTGCAGTTTaGGCGGGTAGTGGATTTCAT +
Preference number: 4 (lower is better)
Translates to: RCGASCLWATACHHAAGGRCSAV*AGSGFH
Trigger: ATGAAATCCACTACCCGCCCAAACTGCACTGCATCT...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGATCCGGAAGATGGTCCTaGCGTGAAGTCCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRSGRWS*REVPAQ
Trigger: CTGAGCTGGGACTTCACGCCAGGACCATCTTCCGGA...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGAGAGGCTCCGGAAGATaGTCCTGGCGTGAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSERGSGR*SWREVP
Trigger: TGGGACTTCACGCCAGGACCATCTTCCGGAGCCTCT...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGGAGGCATTCCCATTGTaGAGCCGCTGGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVEAFPL*SRWRRE
Trigger: CTCCCTCCTCCAGCGGCTCCACAATGGGAATGCCTC...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGTGGCAATGCCCCGGCTaGAGAAGTAGTGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVWQCPG*RSSAGG
Trigger: GCCTCCAGCACTACTTCTCCAGCCGGGGCATTGCCA...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGAGTACTGCACAGCAATaGCAATGCCCCGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILSTAQQ*QCPGWR
Trigger: TCTCCAGCCGGGGCATTGCCATTGCTGTGCAGTACT...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGGCCGTTTCGCCCCAGTaGGTCATCAGGTACCATGAA +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRAVSPQ*VIRYHE
Trigger: TTCATGGTACCTGATGACCCACTGGGGCGAAACGGC...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp TCTCCCTCTGCCTTCTTCACTAGCTCACTCCACCCTATCGTGGCCCAGTCCACAGCAGAGTTGGTCTGGTaGCCAGTCAAGTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SPSAFFTSSLHPIVAQSTAELVW*PVKCLP
Trigger: TGGAAGGCACTTGACTGGCCACCAGACCAACTCTGC...TGTGGACTGGGCCACGATAGGGTGGAGTGAGCTAGTGAAGAAGGCAGAGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGTGCCTCTCATCTGACTaGGGCCACTCAGTCAACCAG +
Preference number: 4 (lower is better)
Translates to: IPQRTLATGYQYSFPELGCLSSD*GHSVNQ
Trigger: CTGGTTGACTGAGTGGCCCCAGTCAGATGAGAGGCA...CCCTAGCTCTGGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCGCGAACACTGGCCACTaGCTACCAGTATTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSANTGH*LPVFLP
Trigger: GGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGC...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GGGGAACGGGGTAACTCAGACCTCTGTAGCTATGCACACACCAGAGCACTGGTCGGTGCAAGCTGTCTTTaGGCGACAGCGTGCCATCAT +
Preference number: 4 (lower is better)
Translates to: GERGNSDLCSYAHTRALVGASCL*ATACHH
Trigger: ATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACC...GACCAGTGCTCTGGTGTGTGCATAGCTACAGAGGTCTGAGTTACCCCGTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCGGTGAGAAACGGGCCTaGGTATCAGACAGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSGEKRA*VSDRVG
Trigger: TCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGCTACACGCCAGGTGGTaGTGCGCTCAGGTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQLHARW*CAQVRN
Trigger: GTTTCTCACCTGAGCGCACCACCACCTGGCGTGTAG...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGATTCTACACGCCAGGTaGTGGTGCGCTCAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILILHAR*WCAQVR
Trigger: TCTCACCTGAGCGCACCACCACCTGGCGTGTAGAAT...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCGGCTCTGTCTCCAAATaGGGAGATCCTAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSGSVSK*GDPKGQ
Trigger: CTGGCCCTTAGGATCTCCCCATTTGGAGACAGAGCC...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGCACTCCAGTACACTaGGAGGCTCCGGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQSTPVH*EAPEDG
Trigger: ACCATCTTCCGGAGCCTCTCAGTGTACTGGAGTGCT...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp TTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCTCACTCCTTGGCACTaGGCACCCAGCAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FMDLSQSGFPDPKHQLRVLTPWH*APSKAE
Trigger: CTCAGCCTTGCTGGGTGCTCAGTGCCAAGGAGTGAG...CACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp TCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAAGTTGGCAAGGCACAGGGTaGAAGGATCCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSSPHSLQKPCAKAKLRSWQGTG*KDPAGP
Trigger: AGGCCCTGCAGGATCCTTTCACCCTGTGCCTTGCCA...ACTTCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp CCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGACGTTGCTGCCGTCAATaGCAATATGGCGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PSSSPHSLQKPCAKAKLRRCCRQ*QYGGGL
Trigger: CAGACCTCCGCCATATTGTCATTGACGGCAGCAACG...TCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp GCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCACAGTTATGTCACGGTaGCCACGGTCCCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: AWRWSQQSQSPELIPSSSTVMSR*PRSQKY
Trigger: GTACTTCTGGGACCGTGGTCACCGTGACATAACTGT...GCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp CAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTACAGTTATGTCACGGTaGCCACGGTCCCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: QSPELIPSSSPHSLQKPCTVMSR*PRSQKY
Trigger: GTACTTCTGGGACCGTGGTCACCGTGACATAACTGT...ACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCCTTTGGCATCCTTACTaGAGCGCCACTGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSLWHPY*SATEAQ
Trigger: TTGTGCCTCAGTGGCGCTTCAGTAAGGATGCCAAAG...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGCAGCCAGCTTCACCATaGACCTGTCATCATAGGAGG +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELEQPASP*TCHHRR
Trigger: CCTCCTATGATGACAGGTTCATGGTGAAGCTGGCTG...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGACCTCAGACAGTTGGTTaGTGTCCCGGCAGTATGGCT +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRPQTVG*CPGSMA
Trigger: AGCCATACTGCCGGGACATCAACCAACTGTCTGAGG...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGAGCTGGCTGAGGTCCTaGCTCGGTAAGATCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWSWLRS*LGKISS
Trigger: TGAACTGATCTTACCGAGTCAGGACCTCAGCCAGCT...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCTGGCTGAGGTCCTaGCTCGGTAAGATCAGTTCA +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSSWLRS*LGKISS
Trigger: TGAACTGATCTTACCGAGTCAGGACCTCAGCCAGCT...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGGACTTGCCTCTCATCTaGCTGGGGCCACTCAGTCAA +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQDLPLI*LGPLSQ
Trigger: TTGACTGAGTGGCCCCAGTCAGATGAGAGGCAAGTC...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAAGTCCTGACCCATGCCCTTaGAGCAAACCACGTGCACGG +
Preference number: 4 (lower is better)
Translates to: SSSPHSLQKPCAKAKLRSPDPCP*SKPRAR
Trigger: CCGTGCACGTGGTTTGCTTCAAGGGCATGGGTCAGG...ACTTCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp ATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGCCCAGGAGGGGACTTTaGCTTTTTCTCCAACCTCGT +
Preference number: 4 (lower is better)
Translates to: IPQRTLATGYQYSFPELGPRRGL*LFLQPR
Trigger: ACGAGGTTGGAGAAAAAGTCAAAGTCCCCTCCTGGG...CCCTAGCTCTGGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp AGAACAGAACCCAGGGGCACCTGTCCTACTTCTTTATCTGGTCTTGGATTCCAGAAGGGCCAGAGAAGGTaGGGCCAAGGGGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RTEPRGTCPTSLSGLGFQKGQRR*GQGEPP
Trigger: TGGAGGCTCCCCTTGGCCTCACCTTCTCTGGCCCTT...CTGGAATCCAAGACCAGATAAAGAAGTAGGACAGGTGCCCCTGGGTTCTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGGGTGAAAGGATCCTaGAGGGCCTCCTTGAAACGC +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQRVKGS*RASLKR
Trigger: GCGTTTCAAGGAGGCCCTGCAGGATCCTTTCACCCT...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp ACTCAGTCAACCAGGGCCCTTAGCACAAAAGGGCAGAAGACACTTTTGGTCTACAACACCTCCAGCAGCTaGCGCCGGAGCCGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: TQSTRALSTKGQKTLLVYNTSSS*RRSRSV
Trigger: AACAGAGCGGCTCCGGCGGCAGCTGCTGGAGGTGTT...GTAGACCAAAAGTGTCTTCTGCCCTTTTGTGCTAAGGGCCCTGGTTGACTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp ATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGCAGTATGGCTCCCGCTaGAGGATGAAGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: IPQRTLATGYQYSFPELGQYGSR*RMKSTL
Trigger: CAAAGTGGACTTCATCCTGCAGCGGGAGCCATACTG...CCCTAGCTCTGGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp GCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCAGTATGGCTCCCGCTaGAGGATGAAGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: AWRWSQQSQSPELIPSSSQYGSR*RMKSTL
Trigger: CAAAGTGGACTTCATCCTGCAGCGGGAGCCATACTG...GCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGCAGTATGGCTCCCGCTaGAGGATGAAGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELEQYGSR*RMKSTL
Trigger: CAAAGTGGACTTCATCCTGCAGCGGGAGCCATACTG...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR GCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGCAGTATGGCTCCCGCTaGAGGATGAAGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRQYGSR*RMKSTL
Trigger: CAAAGTGGACTTCATCCTGCAGCGGGAGCCATACTG...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR GCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGAGCACCAACTCAGGGTaGCTCTGGATCAGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSESTNSG*LWIRVS
Trigger: GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCT...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR GCA 90 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCTGTCTCCAACACACCTaGCCCCAGCCTGGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: HHYTRHAVFNSLCHSEGGCLQHT*PQPGSV
Trigger: TACTGACCCAGGCTGGGGGCAGGTGTGTTGGAGACA...GCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GGGGAACGGGGTAACTCAGACCTCTGTAGCTATGCACACACCAGAGCACTGGTCCCTTCAGGTACTCCTTaGCTCTGCTGGCGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GERGNSDLCSYAHTRALVPSGTP*LCWRFP
Trigger: AGGAAAACGCCAGCAGAGCCAAGGAGTACCTGAAGG...GACCAGTGCTCTGGTGTGTGCATAGCTACAGAGGTCTGAGTTACCCCGTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCTCCCTCTGCCTTCTTCACTAGCTCACTCCACCCTATCGTGGCCCAGTCCACATCAAGGAAGAAGCCCTaGGCTCCCAGAAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: SPSAFFTSSLHPIVAQSTSRKKP*APRKMQ
Trigger: CTGCATCTTTCTGGGAGCCCAGGGCTTCTTCCTTGA...TGTGGACTGGGCCACGATAGGGTGGAGTGAGCTAGTGAAGAAGGCAGAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGTCCGGAAGATGGTCCTaGCGTGAAGTCCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVSGRWS*REVPAQ
Trigger: CTGAGCTGGGACTTCACGCCAGGACCATCTTCCGGA...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp TTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGAACAGAGCCTCTCTATaGGCATCCCCCGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: FMDLSQSGFPDPKHQLRVNRASL*ASPGDC
Trigger: GCAGTCCCCGGGGGATGCCCATAGAGAGGCTCTGTT...CACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGAAGCCAGTGCTCCTaGCCCCTGCCCACTAGACGC +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLRSQCS*PLPTRR
Trigger: GCGTCTAGTGGGCAGGGGCCAGGAGCACTGGCTTCT...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp TGTTCTGTTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCATCAGGTTGGGACCCATTGTGGAGCCGCTaGAGGAGGGAGGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: CSVAPPYCLKAVISSGWDPLWSR*RREAPR
Trigger: CCGAGGAGCCTCCCTCCTCCAGCGGCTCCACAATGG...GTCCCAACCTGATGAGATTACGGCCTTGAGACAATAAGGTGGAGCAACAGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GAGTTCCTCCAGGGAAGGAACGCTTCAGGTCATGGAGAAGTTCAAGGGGAAAATTGGCGGAGGTCTGGCTaGCCAGGCACATTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: EFLQGRNASGHGEVQGENWRRSG*PGTLAR
Trigger: CCTTGCCAATGTGCCTGGCCAGCCAGACCTCCGCCA...ATTTTCCCCTTGAACTTCTCCATGACCTGAAGCGTTCCTTCCCTGGAGGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAATATGGCGGAGGTCTaGCTGGCCAGGCACATTGGC +
Preference number: 4 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVNMAEV*LARHIG
Trigger: GCCAATGTGCCTGGCCAGCCAGACCTCCGCCATATT...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAAGTACTGCACAGCAATaGCAATGCCCCGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRSTAQQ*QCPGWR
Trigger: TCTCCAGCCGGGGCATTGCCATTGCTGTGCAGTACT...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGGCCGTTTCGCCCCAGTaGGTCATCAGGTACCATGAA +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSEAVSPQ*VIRYHE
Trigger: TTCATGGTACCTGATGACCCACTGGGGCGAAACGGC...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp GGGGAACGGGGTAACTCAGACCTCTGTAGCTATGCACACACCAGAGCACTGGTCAGGGCCTCAGACAGTTaGTTGATGTCCCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: GERGNSDLCSYAHTRALVRASDS*LMSRQY
Trigger: ATACTGCCGGGACATCAACCAACTGTCTGAGGCCCT...GACCAGTGCTCTGGTGTGTGCATAGCTACAGAGGTCTGAGTTACCCCGTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTAGGGCCTCAGACAGTTaGTTGATGTCCCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: QSPELIPSSSPHSLQKPCRASDS*LMSRQY
Trigger: ATACTGCCGGGACATCAACCAACTGTCTGAGGCCCT...ACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGAGGGCCTCAGACAGTTaGTTGATGTCCCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELERASDS*LMSRQY
Trigger: ATACTGCCGGGACATCAACCAACTGTCTGAGGCCCT...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAACTCAGGGTGCCTCTaGATCAGAGTGAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSNSGCL*IRVSSR
Trigger: TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTT...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCTCAGCTTGGAGGTaGAGCCAACAGTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSSSAWR*SQQSQS
Trigger: AGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCT...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp ATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGCACTCCACCCTATCGTaGCCCAGTCCACATAACACT +
Preference number: 4 (lower is better)
Translates to: IPQRTLATGYQYSFPELGHSTLS*PSPHNT
Trigger: AGTGTTATGTGGACTGGGCCACGATAGGGTGGAGTG...CCCTAGCTCTGGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGATGCCTCTCATCTGACTaGGGCCACTCAGTCAACCAG +
Preference number: 4 (lower is better)
Translates to: PSSSPHSLQKPCAKAKLRCLSSD*GHSVNQ
Trigger: CTGGTTGACTGAGTGGCCCCAGTCAGATGAGAGGCA...TCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GCTTCATCGATTGGTGAAAAATCGACGTGTTCATCTCAACACCAGGAAGTGCATCCTTTCGCCTGGGCCTaGGGGGCCCCATCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ASSIGEKSTCSSQHQEVHPFAWA*GAPSAQ
Trigger: CTGAGCCGATGGGGCCCCCCAGGCCCAGGCGAAAGG...ATGCACTTCCTGGTGTTGAGATGAACACGTCGATTTTTCACCAATCGATGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAAAACCAGGAGGAGCAGTaGGCTCCTTCAAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QSQSPELIPSSSPHSLQKNQEEQ*APSRLR
Trigger: TCTCAGCCTTGAAGGAGCCCACTGCTCCTCCTGGTT...TTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGGGTGAGAAACGGGCCTaGGTATCAGACAGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQGEKRA*VSDRVG
Trigger: TCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 72 bp AAAGAGGTAATCGGCAGCCGCCTAGAGACCACCCAATaGCTGGCTAAAGCCATCACCAAAGCCCCACAACCC +
Preference number: 4 (lower is better)
Translates to: KEVIGSRLETTQ*LAKAITKAPQP
Trigger: GGGTTGTGGGGCTTTGGTGATGGCTTTAGCCAGCAATTGGGTGGTCTCTAGGCGGCTGCCGATTACCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGTCTTCTACCCGGCTCTaGGCCATGACAAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQSSTRL*AMTKAS
Trigger: TGAAGCCTTTGTCATGGCTCAGAGCCGGGTAGAAGA...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCTGGCAAGGCACAGGGTaGAAGGATCCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLWQGTG*KDPAGP
Trigger: AGGCCCTGCAGGATCCTTTCACCCTGTGCCTTGCCA...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCCGTTGCTGCCGTCAATaGCAATATGGCGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: HHYTRHAVFNSLCHSEGGRCCRQ*QYGGGL
Trigger: CAGACCTCCGCCATATTGTCATTGACGGCAGCAACG...GCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGACTTTGGCATCCTTACTaGAGCGCCACTGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRLWHPY*SATEAQ
Trigger: TTGTGCCTCAGTGGCGCTTCAGTAAGGATGCCAAAG...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCCAGCTTCACCATaGACCTGTCATCATAGGAGG +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSEQPASP*TCHHRR
Trigger: CCTCCTATGATGACAGGTTCATGGTGAAGCTGGCTG...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGACCAAAGTGGCTTCCCTaGTCCAAAGCACCAACTCAG +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRPKWLP*SKAPTQ
Trigger: CTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGG...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGTCATTGTCACCTCTTTaGCCAGCCTGTCTCCAACAC +
Preference number: 4 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILSLSPL*PACLQH
Trigger: GTGTTGGAGACAGGCTGGTCAAAGAGGTGACAATGA...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTACATCTGCCATAACTTaGCCAGACACAGTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: QSPELIPSSSPHSLQKPCTSAIT*PDTVPP
Trigger: TGGGGGAACTGTGTCTGGTCAAGTTATGGCAGATGT...ACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGGAATGTCACCCTAGATaGTTCTTCCCCAAAGACGGG +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELEECHPR*FFPKDG
Trigger: CCCGTCTTTGGGGAAGAATCATCTAGGGTGACATTC...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTCCTCTAGAGAGCTaGAGCCATCTGGTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: QSPELIPSSSPHSLQKPCAPLES*SHLVLR
Trigger: TCTAAGAACCAGATGGCTTCAGCTCTCTAGAGGAGC...ACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp GAGTTCCTCCAGGGAAGGAACGCTTCAGGTCATGGAGAAGTTCAAGGGGAAAATCCTGACCCATGCCCTTaGAGCAAACCACGTGCACGG +
Preference number: 4 (lower is better)
Translates to: EFLQGRNASGHGEVQGENPDPCP*SKPRAR
Trigger: CCGTGCACGTGGTTTGCTTCAAGGGCATGGGTCAGG...ATTTTCCCCTTGAACTTCTCCATGACCTGAAGCGTTCCTTCCCTGGAGGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCGACTTCCTAGGCCCTTaGTCCATGCATGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSDFLGP*SMHVSP
Trigger: AGGAGAAACATGCATGGATCAAGGGCCTAGGAAGTC...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp ACTCAGTCAACCAGGGCCCTTAGCACAAAAGGGCAGAAGACACTTTTGGTCTACCCAGATGGGCTGACGTaGTCCAGGCCAGGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: TQSTRALSTKGQKTLLVYPDGLT*SRPGSQ
Trigger: TTGACTGCCTGGCCTGGAGCACGTCAGCCCATCTGG...GTAGACCAAAAGTGTCTTCTGCCCTTTTGTGCTAAGGGCCCTGGTTGACTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp GCTTCATCGATTGGTGAAAAATCGACGTGTTCATCTCAACACCAGGAAGTGCATAGGCCCCCGACCCCGTaGCATGCCCTGCTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: ASSIGEKSTCSSQHQEVHRPPTP*HALLLV
Trigger: GACAAGCAGCAGGGCATGGCACGGGGTCGGGGGCCT...ATGCACTTCCTGGTGTTGAGATGAACACGTCGATTTTTCACCAATCGATGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGGGTGAAAGGATCCTaGAGGGCCTCCTTGAAACGC +
Preference number: 4 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVRVKGS*RASLKR
Trigger: GCGTTTCAAGGAGGCCCTGCAGGATCCTTTCACCCT...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCGCACAGCAATGGCAATaGCCCGGCTGGAGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: HHYTRHAVFNSLCHSEGGAQQWQ*PGWRSS
Trigger: ACTACTTCTCCAGCCGGGGCATTGCCATTGCTGTGC...GCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCCGGTCCCAGAAGTACTaGACAGCAATGGCAATGCCC +
Preference number: 4 (lower is better)
Translates to: HHYTRHAVFNSLCHSEGGRSQKY*TAMAMP
Trigger: GGGCATTGCCATTGCTGTGCAGTACTTCTGGGACCG...GCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGCGGTCCCAGAAGTACTaGACAGCAATGGCAATGCCC +
Preference number: 4 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVRSQKY*TAMAMP
Trigger: GGGCATTGCCATTGCTGTGCAGTACTTCTGGGACCG...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGACCCGGGTCTTCCGAATaGCACCACTACCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRPGSSE*HHYLFP
Trigger: AGGAAAAAGGTAGTGGTGGCATTCGGAAGACCCGGG...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR GCA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCACCAACTCAGGGTaGCTCTGGATCAGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVSTNSG*LWIRVS
Trigger: GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCT...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR GCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGTCCACATAACACTGTaGCAGGGCCTAGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRVHITL*QGLASP
Trigger: AGGAGATGCTAGGCCCTGGCACAGTGTTATGTGGAC...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCGGTTAGAGAGCCTGTaGAGCCACAGGCAGACACAC +
Preference number: 4 (lower is better)
Translates to: FMDLSQSGFPDPKHQLRVRLESL*SHRQTH
Trigger: GTGTGTCTGCCTGTGGCTGCACAGGCTCTCTAACCG...CACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGTGTAGTCACCCTGGATaGTGTCAGAGTGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELECSHPG*CQSAIR
Trigger: CCTAATGGCACTCTGACAGCATCCAGGGTGACTACA...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGTTTCTCTACATGTCCTaGAGCTGCCCCACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRFLYMS*SCPTSP
Trigger: AGGAGAAGTGGGGCAGCTGCAGGACATGTAGAGAAA...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AGAACAGAACCCAGGGGCACCTGTCCTACTTCTTTATCTGGTCTTGGATTCCAGGACAGCGTGCCATCATaGTGCTGGAGGGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RTEPRGTCPTSLSGLGFQDSVPS*CWRARR
Trigger: CCTTCTGGCCCTCCAGCAGCATGATGGCACGCTGTC...CTGGAATCCAAGACCAGATAAAGAAGTAGGACAGGTGCCCCTGGGTTCTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp ACTCAGTCAACCAGGGCCCTTAGCACAAAAGGGCAGAAGACACTTTTGGTCTACTCCCCAGCGCTGTGGTaGAAGCTGTCTTTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: TQSTRALSTKGQKTLLVYSPALW*KLSLGD
Trigger: GTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGA...GTAGACCAAAAGTGTCTTCTGCCCTTTTGTGCTAAGGGCCCTGGTTGACTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp GCTTCATCGATTGGTGAAAAATCGACGTGTTCATCTCAACACCAGGAAGTGCATCCAGACCTTGGGTGCTaGCCTGGGCCGCCGAGCCTT +
Preference number: 4 (lower is better)
Translates to: ASSIGEKSTCSSQHQEVHPDLGC*PGPPSL
Trigger: AAGGCTCGGCGGCCCAGGGCAGCACCCAAGGTCTGG...ATGCACTTCCTGGTGTTGAGATGAACACGTCGATTTTTCACCAATCGATGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGAACCAAATGGGAAGCTaGAGCCAGGCTTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSENQMGS*SQASWR
Trigger: TCTCCAGGAAGCCTGGCTGCAGCTTCCCATTTGGTT...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGCCTTCAGGTACTCCTTaGCTCTGCTGGCGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQPSGTP*LCWRFP
Trigger: AGGAAAACGCCAGCAGAGCCAAGGAGTACCTGAAGG...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp TTGCTCAAAAGGGATGCAGCCATTATAGGGCACGTTATAGTGAGAATGCAGTGTGCCCTGGGCACCAGATaGGCTGACGTGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LLKRDAAIIGHVIVRMQCALGTR*ADVLQA
Trigger: GGCCTGGAGCACGTCAGCCCATCTGGTGCCCAGGGC...ACACTGCATTCTCACTATAACGTGCCCTATAATGGCTGCATCCCTTTTGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCCAATCCATCTCCCTaGGACCACCCTGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: FMDLSQSGFPDPKHQLRVPNPSP*DHPVSL
Trigger: GAGGGAAACAGGGTGGTCCCAGGGAGATGGATTGGG...CACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp AGAACAGAACCCAGGGGCACCTGTCCTACTTCTTTATCTGGTCTTGGATTCCAGGAGGCATTCCCATTGTaGAGCCGCTGGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RTEPRGTCPTSLSGLGFQEAFPL*SRWRRE
Trigger: CTCCCTCCTCCAGCGGCTCCACAATGGGAATGCCTC...CTGGAATCCAAGACCAGATAAAGAAGTAGGACAGGTGCCCCTGGGTTCTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGAATATGGCGGAGGTCTaGCTGGCCAGGCACATTGGC +
Preference number: 4 (lower is better)
Translates to: FMDLSQSGFPDPKHQLRVNMAEV*LARHIG
Trigger: GCCAATGTGCCTGGCCAGCCAGACCTCCGCCATATT...CACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp ATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGGCCAGGTCCCGGAACTaGTCATTGGAGACAATTATC +
Preference number: 4 (lower is better)
Translates to: IPQRTLATGYQYSFPELGARSRN*SLETII
Trigger: GATAATTGTCTCCAATGACCAGTTCCGGGACCTGGC...CCCTAGCTCTGGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCGCCAGGTCCCGGAACTaGTCATTGGAGACAATTATC +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSARSRN*SLETII
Trigger: GATAATTGTCTCCAATGACCAGTTCCGGGACCTGGC...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp GCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCGCCAGGTCCCGGAACTaGTCATTGGAGACAATTATC +
Preference number: 4 (lower is better)
Translates to: AWRWSQQSQSPELIPSSSARSRN*SLETII
Trigger: GATAATTGTCTCCAATGACCAGTTCCGGGACCTGGC...GCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp TTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGGAAATTCATCCAGGGTaGGGCCGTTTCGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: FMDLSQSGFPDPKHQLRVEIHPG*GRFAPV
Trigger: CACTGGGGCGAAACGGCCCCACCCTGGATGAATTTC...CACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGCCCCTGTGTCCTGGCTaGCTTCTTCAGAAATTCATC +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRPLCPG*LLQKFI
Trigger: GATGAATTTCTGAAGAAGCCAGCCAGGACACAGGGG...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCCCCCTGTGTCCTGGCTaGCTTCTTCAGAAATTCATC +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSPLCPG*LLQKFI
Trigger: GATGAATTTCTGAAGAAGCCAGCCAGGACACAGGGG...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp GAGTTCCTCCAGGGAAGGAACGCTTCAGGTCATGGAGAAGTTCAAGGGGAAAATCAGAAAGGGCTGAGCTaGAGGCGGCTGGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: EFLQGRNASGHGEVQGENQKGLS*RRLELT
Trigger: TGTCAGCTCCAGCCGCCTCCAGCTCAGCCCTTTCTG...ATTTTCCCCTTGAACTTCTCCATGACCTGAAGCGTTCCTTCCCTGGAGGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAAACTCAGGGTGCCTCTaGATCAGAGTGAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRNSGCL*IRVSSR
Trigger: TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTT...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGCACTCCACCCTATCGTaGCCCAGTCCACATAACACT +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQHSTLS*PSPHNT
Trigger: AGTGTTATGTGGACTGGGCCACGATAGGGTGGAGTG...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATGGCCTAGATTCTCCTaGGATTTACTTCAAGGAATG +
Preference number: 4 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPWPRFS*DLLQGM
Trigger: CATTCCTTGAAGTAAATCCCAGGAGAATCTAGGCCA...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGTCCCACAGCGAACACTaGCCACTGGCTACCAGTATT +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSESHSEH*PLATSI
Trigger: AATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGA...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGCCTTGGGTGCTGCCCTaGGCCGCCGAGCCTTCATCC +
Preference number: 4 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKPWVLP*AAEPSS
Trigger: GGATGAAGGCTCGGCGGCCCAGGGCAGCACCCAAGG...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGATGTCTTCTCTGGGCTaGGGAAGTGATGGGATTAGG +
Preference number: 4 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILMSSLG*GSDGIR
Trigger: CCTAATCCCATCACTTCCCCAGCCCAGAGAAGACAT...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGTTGGAATGTCTTCTCTaGGCTGGGGAAGTGATGGGA +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELELECLL*AGEVMG
Trigger: TCCCATCACTTCCCCAGCCCAGAGAAGACATTCCAA...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCCTTCAGTCAGGCCACTaGTCATCAGTGAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLLQSGH*SSVSLA
Trigger: CGCCAGGCTCACTGATGATCAGTGGCCTGACTGAAG...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCTCTTCTACCCGGCTCTaGGCCATGACAAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: HHYTRHAVFNSLCHSEGGSSTRL*AMTKAS
Trigger: TGAAGCCTTTGTCATGGCTCAGAGCCGGGTAGAAGA...GCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp GCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCTTACTGAAGCGCCACTaGGGCACAAAGACAGTTATG +
Preference number: 4 (lower is better)
Translates to: AWRWSQQSQSPELIPSSSLLKRH*GTKTVM
Trigger: CATAACTGTCTTTGTGCCTCAGTGGCGCTTCAGTAA...GCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGTTACTGAAGCGCCACTaGGGCACAAAGACAGTTATG +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELELLKRH*GTKTVM
Trigger: CATAACTGTCTTTGTGCCTCAGTGGCGCTTCAGTAA...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCCTTTGGCATCCTTACTaGAGCGCCACTGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: HHYTRHAVFNSLCHSEGGLWHPY*SATEAQ
Trigger: TTGTGCCTCAGTGGCGCTTCAGTAAGGATGCCAAAG...GCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGAGCTTTTGCAGGAAGTaGCTCTCTCTGACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELESFCRK*LSLTLA
Trigger: TGCCAAAGTCAGAGAGAGTCACTTCCTGCAAAAGCT...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGTCATCAGGTACCATaGAGAGGTTTCCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRGHQVP*RGFPQR
Trigger: CCTTTGTGGGAAACCTCTTCATGGTACCTGATGACC...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp GCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCGTGCTAAGGCAAAGTTaGGAAGTTAAGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: AWRWSQQSQSPELIPSSSVLRQS*EVKAEQ
Trigger: CTGCTCAGCCTTAACTTCTCAACTTTGCCTTAGCAC...GCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCCCAAAAAGGAAGGGGTaGGGACACAAGGACCCTCCC +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLPKRKG*GHKDPP
Trigger: GGGAGGGTCCTTGTGTCCTCACCCCTTCCTTTTTGG...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGCTCCTCTAGAGAGCTaGAGCCATCTGGTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRAPLES*SHLVLR
Trigger: TCTAAGAACCAGATGGCTTCAGCTCTCTAGAGGAGC...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGGCAGATGAGAAGGTGTaGGGTCTTAAAGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELEADEKV*GLKDSH
Trigger: ATGGCTGTCTTTAAGACCTCACACCTTCTCATCTGC...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TCCTTCAAGGCTGAGAGGACCCCTGTACCTTCCCTCTTTCCTGCTCTAGGGGTTGACTTCCTAGGCCCTTaGTCCATGCATGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SFKAERTPVPSLFPALGVDFLGP*SMHVSP
Trigger: AGGAGAAACATGCATGGATCAAGGGCCTAGGAAGTC...AACCCCTAGAGCAGGAAAGAGGGAAGGTACAGGGGTCCTCTCAGCCTTGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCCGCTCCACATGGGGCTaGTGTTCCCGAACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLRSTWG*CSRTLF
Trigger: GAACAAGGTTCGGGAACAGCAGCCCCATGTGGAGCG...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCGGTACTCCTTGGCTCTaGTGGCGTTTTCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLGTPWL*WRFPWG
Trigger: GCCCCAAGGAAAACGCCAGCAGAGCCAAGGAGTACC...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp CACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGACAGCCAGGGGCAACTaGAACAGAGCCTCTCTATGG +
Preference number: 4 (lower is better)
Translates to: HFMDLSQSGFPDPKHQLRTARGN*NRASLW
Trigger: CCATAGAGAGGCTCTGTTGCAGTTGCCCCTGGCTGT...CCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp GCTTCATCGATTGGTGAAAAATCGACGTGTTCATCTCAACACCAGGAAGTGCATAGTGCTCCTGGCCCCTaGCCACTAGACGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ASSIGEKSTCSSQHQEVHSAPGP*PLDASC
Trigger: GCAGGAGGCGTCTAGTGGGCAGGGGCCAGGAGCACT...ATGCACTTCCTGGTGTTGAGATGAACACGTCGATTTTTCACCAATCGATGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGCGGTCCCAGAAGTACTaGACAGCAATGGCAATGCCC +
Preference number: 4 (lower is better)
Translates to: HFMDLSQSGFPDPKHQLRRSQKY*TAMAMP
Trigger: GGGCATTGCCATTGCTGTGCAGTACTTCTGGGACCG...CCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCTCTTCTCTCCCCTGCTaGTGTTTACCATGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSSSLPC*CLPCSA
Trigger: TGCAGAACATGGTAAACAGCAGCAGGGGAGAGAAGA...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR GCA 90 bp CAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAAAAGAAGCTTAGGACTTaGCTCTCATCTGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: QSQSPELIPSSSPHSLQKKKLRT*LSSDWG
Trigger: GCCCCAGTCAGATGAGAGGCAAGTCCTAAGCTTCTT...TTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGAAGAAGCTTAGGACTTaGCTCTCATCTGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSEKKLRT*LSSDWG
Trigger: GCCCCAGTCAGATGAGAGGCAAGTCCTAAGCTTCTT...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAATTTCTCTACATGTCCTaGAGCTGCCCCACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QSQSPELIPSSSPHSLQKFLYMS*SCPTSP
Trigger: AGGAGAAGTGGGGCAGCTGCAGGACATGTAGAGAAA...TTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGTTCCCATTGTTCTGTTaGTCCACCTTATTGTCTCAA +
Preference number: 4 (lower is better)
Translates to: RCGASCLWATACHHAAGGFPLFC*STLLSQ
Trigger: TTGAGACAATAAGGTGGAGCAACAGAACAATGGGAA...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGTGGGCCACATGCTGCTaGCCTTTCGCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKWATCC*PFAWAW
Trigger: CCAGGCCCAGGCGAAAGGGCAGCAGCATGTGGCCCA...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp GCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCAGTGGCATCACTCAATaGCAGGGAAAAGTCCACCTA +
Preference number: 4 (lower is better)
Translates to: AWRWSQQSQSPELIPSSSSGITQ*QGKVHL
Trigger: TAGGTGGACTTTTCCCTGGCATTGAGTGATGCCACT...GCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGGCTGCCCTGAAGCTCTaGCTGCAGCCCTCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKAALKL*LQPSRP
Trigger: TGGACGGGAGGGCTGCAGCCAGAGCTTCAGGGCAGC...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251343.9
CDS-3UTR CCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCCCCAATCCATCTCCCTaGGACCACCCTGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLPNPSP*DHPVSL
Trigger: GAGGGAAACAGGGTGGTCCCAGGGAGATGGATTGGG...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp TTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCGTCAATGACAATATaGCGGAGGTCTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: FMDLSQSGFPDPKHQLRVPSMTI*RRSGWP
Trigger: TGGCCAGCCAGACCTCCGCCATATTGTCATTGACGG...CACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGCCCGGAACTGGTCATTaGAGACAATTATCCCATCTG +
Preference number: 4 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWPGTGH*RQLSHL
Trigger: CAGATGGGATAATTGTCTCCAATGACCAGTTCCGGG...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGCCCGGAACTGGTCATTaGAGACAATTATCCCATCTG +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELEPGTGH*RQLSHL
Trigger: CAGATGGGATAATTGTCTCCAATGACCAGTTCCGGG...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGACCCCTGTGTCCTGGCTaGCTTCTTCAGAAATTCATC +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRPLCPG*LLQKFI
Trigger: GATGAATTTCTGAAGAAGCCAGCCAGGACACAGGGG...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAAGACCCCTGTGTCCTaGCTGGCTTCTTCAGAAATT +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSKTPVS*LASSEI
Trigger: AATTTCTGAAGAAGCCAGCCAGGACACAGGGGTCTT...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGAAGACCCCTGTGTCCTaGCTGGCTTCTTCAGAAATT +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELEKTPVS*LASSEI
Trigger: AATTTCTGAAGAAGCCAGCCAGGACACAGGGGTCTT...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CCA 90 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCAACTCAGGGTGCCTCTaGATCAGAGTGAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: HHYTRHAVFNSLCHSEGGNSGCL*IRVSSR
Trigger: TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTT...GCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCCTAGGGTGTGGATCCTaGAGACAAAGGACCCACATC +
Preference number: 4 (lower is better)
Translates to: HHYTRHAVFNSLCHSEGGLGCGS*RQRTHI
Trigger: GATGTGGGTCCTTTGTCTCCAGGATCCACACCCTAG...GCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGGGCAGAAGACACTTTTaGTCTACTGCACACCCACCA +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSEGRRHF*STAHPP
Trigger: TGGTGGGTGTGCAGTAGACCAAAAGTGTCTTCTGCC...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTAGAGCTGAAGCCATCTaGTTCTTAGATTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: QSPELIPSSSPHSLQKPCRAEAI*FLDSSP
Trigger: GGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCT...ACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATCTGACTGGTTGTGCTGGGCCGTaGGGGTGGTGCCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: TKSTSLSIRSLGLASHLTGCAGP*GWCHGP
Trigger: TGGCCCATGGCACCACCCCCACGGCCCAGCACAACC...AGTCAGATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCCTTCAAGGCTGAGAGGACCCCTGTACCTTCCCTCTTTCCTGCTCTAGGGGTTTTGGAATGTCTTCTCTaGGCTGGGGAAGTGATGGGA +
Preference number: 4 (lower is better)
Translates to: SFKAERTPVPSLFPALGVLECLL*AGEVMG
Trigger: TCCCATCACTTCCCCAGCCCAGAGAAGACATTCCAA...AACCCCTAGAGCAGGAAAGAGGGAAGGTACAGGGGTCCTCTCAGCCTTGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAACCTCGTAACCAAATaGGAAGCTGCAGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQNLVTK*EAAARL
Trigger: AAGCCTGGCTGCAGCTTCCCATTTGGTTACGAGGTT...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGGGCTCTGTCTCCAAATaGGGAGATCCTAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: FMDLSQSGFPDPKHQLRVGSVSK*GDPKGQ
Trigger: CTGGCCCTTAGGATCTCCCCATTTGGAGACAGAGCC...CACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGCACACACCAGAGCACTaGTCTTTTCCAGGCAAAATG +
Preference number: 4 (lower is better)
Translates to: LWIRVSSRGTLTERAELEHTPEH*SFPGKM
Trigger: CATTTTGCCTGGAAAAGACCAGTGCTCTGGTGTGTG...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGAGACCACCCAATTGCTaGCTAAAGCCATCACCAAAG +
Preference number: 4 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWRPPNC*LKPSPK
Trigger: CTTTGGTGATGGCTTTAGCCAGCAATTGGGTGGTCT...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGAGACCACCCAATTGCTaGCTAAAGCCATCACCAAAG +
Preference number: 4 (lower is better)
Translates to: IPQRTLATGYQYSFPELGRPPNC*LKPSPK
Trigger: CTTTGGTGATGGCTTTAGCCAGCAATTGGGTGGTCT...CCCTAGCTCTGGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TGTTCTGTTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCATCAGGTTGGGACCTTCAGTCAGGCCACTaGTCATCAGTGAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: CSVAPPYCLKAVISSGWDLQSGH*SSVSLA
Trigger: CGCCAGGCTCACTGATGATCAGTGGCCTGACTGAAG...GTCCCAACCTGATGAGATTACGGCCTTGAGACAATAAGGTGGAGCAACAGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp AGAACAGAACCCAGGGGCACCTGTCCTACTTCTTTATCTGGTCTTGGATTCCAGAGCACTCCAGTACACTaGGAGGCTCCGGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: RTEPRGTCPTSLSGLGFQSTPVH*EAPEDG
Trigger: ACCATCTTCCGGAGCCTCTCAGTGTACTGGAGTGCT...CTGGAATCCAAGACCAGATAAAGAAGTAGGACAGGTGCCCCTGGGTTCTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp AGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATCCCTTTCAGGGGTGCTaGCTCCCTTGCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SRTKSTSLSIRSLGLASHPFQGC*LPCPST
Trigger: GGTGGAGGGGCAAGGGAGTCAGCACCCCTGAAAGGG...ATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGTTACTGAAGCGCCACTaGGGCACAAAGACAGTTATG +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSELLKRH*GTKTVM
Trigger: CATAACTGTCTTTGTGCCTCAGTGGCGCTTCAGTAA...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp CACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGCAGCCAGCTTCACCATaGACCTGTCATCATAGGAGG +
Preference number: 4 (lower is better)
Translates to: HFMDLSQSGFPDPKHQLRQPASP*TCHHRR
Trigger: CCTCCTATGATGACAGGTTCATGGTGAAGCTGGCTG...CCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGCCACTCAAGCAGGTaGGGCTCAAAAGTTAAGACT +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQSHSSR*GSKVKT
Trigger: AGTCTTAACTTTTGAGCCTCACCTGCTTGAGTGGCT...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCCTCTTGAGAGCTGGCTaGGGTCCTGACTCGGTAAGA +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLLLRAG*GPDSVR
Trigger: TCTTACCGAGTCAGGACCTCAGCCAGCTCTCAAGAG...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp ATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGGGCTTCATCGATTGGTaGAAAATCGACGTGTTCATC +
Preference number: 4 (lower is better)
Translates to: IPQRTLATGYQYSFPELGGFIDW*KIDVFI
Trigger: GATGAACACGTCGATTTTTCACCAATCGATGAAGCC...CCCTAGCTCTGGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCAGAAGTCAGGGCCTGCTCCTGCAGATGGAATaGAACCTTCCAAAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: HAVFNSLCHSEGGRSQGLLLQME*NLPKRG
Trigger: ACCTCTTTTTGGAAGGTTTCATTCCATCTGCAGGAG...CAGGCCCTGACTTCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp ATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGCTCCTGCAGATGGAATaGAACCTTCCAAAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: IPQRTLATGYQYSFPELGLLQME*NLPKRG
Trigger: ACCTCTTTTTGGAAGGTTTCATTCCATCTGCAGGAG...CCCTAGCTCTGGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGCCAGCTCAGCCGCTCTaGCAGCTCTTCTACCCGGCT +
Preference number: 4 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKPAQPL*QLFYPA
Trigger: AGCCGGGTAGAAGAGCTGGCAGAGCGGCTGAGCTGG...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGTGCCAGTCACCAAGTTaGCCCCTCGGGCGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKCQSPS*PLGRLV
Trigger: AACGAGGCGCCCGAGGGGGCAACTTGGTGACTGGCA...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGGCGTTCTCTGATGATTaGCATCCACTTCTCAGACTC +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSEAFSDD*HPLLRL
Trigger: GAGTCTGAGAAGTGGATGGCAATCATCAGAGAACGC...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR GCA 90 bp TTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCCGGGTCTTCCGAATaGCACCACTACCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: FMDLSQSGFPDPKHQLRVPGSSE*HHYLFP
Trigger: AGGAAAAAGGTAGTGGTGGCATTCGGAAGACCCGGG...CACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp CATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCAGAAGTCAGGGCCTGACACTTTTGGTCTACTaGACACCCACCATCACTGAA +
Preference number: 4 (lower is better)
Translates to: HAVFNSLCHSEGGRSQGLTLLVY*TPTITE
Trigger: TTCAGTGATGGTGGGTGTGCAGTAGACCAAAAGTGT...CAGGCCCTGACTTCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCCCCAGAGCTAGGGGCTaGCTTAAAGGAAATTGTAGC +
Preference number: 4 (lower is better)
Translates to: HHYTRHAVFNSLCHSEGGPRARG*LKGNCS
Trigger: GCTACAATTTCCTTTAAGGCAGCCCCTAGCTCTGGG...GCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGCCCAGAGCTAGGGGCTaGCTTAAAGGAAATTGTAGC +
Preference number: 4 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVPRARG*LKGNCS
Trigger: GCTACAATTTCCTTTAAGGCAGCCCCTAGCTCTGGG...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATCCATGGGCCACATGCTaGTGCCCTTTCGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SRTKSTSLSIRSLGLASHPWATC*CPFAWA
Trigger: GGCCCAGGCGAAAGGGCAGCAGCATGTGGCCCATGG...ATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp GCTTCATCGATTGGTGAAAAATCGACGTGTTCATCTCAACACCAGGAAGTGCATCACGCCAGGTGGTGGTaGGCTCAGGTGAGAAACGGG +
Preference number: 4 (lower is better)
Translates to: ASSIGEKSTCSSQHQEVHHARWW*AQVRNG
Trigger: CCCGTTTCTCACCTGAGCGCACCACCACCTGGCGTG...ATGCACTTCCTGGTGTTGAGATGAACACGTCGATTTTTCACCAATCGATGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ACCTACTGTGTAAATGTAGATTTTGGAGGTTGCTCAAAAGGGATGCAGCCATTAGCCCTGGGCACCAGATaGGCTGACGTGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TYCVNVDFGGCSKGMQPLALGTR*ADVLQA
Trigger: GGCCTGGAGCACGTCAGCCCATCTGGTGCCCAGGGC...TAATGGCTGCATCCCTTTTGAGCAACCTCCAAAATCTACATTTACACAGTAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ACACACATAAAGCAGAAGTGTGCCTTGCTTTATGCAACATACGTCTTCCATAGAGTGAGCCTGGCGCCCTaGGCACCAGATGGGCTGACG +
Preference number: 4 (lower is better)
Translates to: THIKQKCALLYATYVFHRVSLAP*APDGLT
Trigger: CGTCAGCCCATCTGGTGCCCAGGGCGCCAGGCTCAC...TCTATGGAAGACGTATGTTGCATAAAGCAAGGCACACTTCTGCTTTATGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGCCGGGAGGCTCACGGTaGACACAGAACCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKPGGSR*TQNPPP
Trigger: AGGAGGAGGGTTCTGTGTCCACCGTGAGCCTCCCGG...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GCTTCATCGATTGGTGAAAAATCGACGTGTTCATCTCAACACCAGGAAGTGCATCCGGGAGGCTCACGGTaGACACAGAACCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ASSIGEKSTCSSQHQEVHPGGSR*TQNPPP
Trigger: AGGAGGAGGGTTCTGTGTCCACCGTGAGCCTCCCGG...ATGCACTTCCTGGTGTTGAGATGAACACGTCGATTTTTCACCAATCGATGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GAGTTCCTCCAGGGAAGGAACGCTTCAGGTCATGGAGAAGTTCAAGGGGAAAATAGTACTGCACAGCAATaGCAATGCCCCGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: EFLQGRNASGHGEVQGENSTAQQ*QCPGWR
Trigger: TCTCCAGCCGGGGCATTGCCATTGCTGTGCAGTACT...ATTTTCCCCTTGAACTTCTCCATGACCTGAAGCGTTCCTTCCCTGGAGGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGACCCGGAACTGGTCATTaGAGACAATTATCCCATCTG +
Preference number: 4 (lower is better)
Translates to: PSSSPHSLQKPCAKAKLRPGTGH*RQLSHL
Trigger: CAGATGGGATAATTGTCTCCAATGACCAGTTCCGGG...TCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp TCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAAGTAACTCAGGGTGCCTCTaGATCAGAGTGAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SSSPHSLQKPCAKAKLRSNSGCL*IRVSSR
Trigger: TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTT...ACTTCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCCACCCTAGCTCAGCTTaGAGGTGGAGCCAACAGTCT +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLHPSSA*RWSQQS
Trigger: AGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTG...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CCA 90 bp AGAACAGAACCCAGGGGCACCTGTCCTACTTCTTTATCTGGTCTTGGATTCCAGGCAGAGTTGGTCTGGTaGCCAGTCAAGTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RTEPRGTCPTSLSGLGFQAELVW*PVKCLP
Trigger: TGGAAGGCACTTGACTGGCCACCAGACCAACTCTGC...CTGGAATCCAAGACCAGATAAAGAAGTAGGACAGGTGCCCCTGGGTTCTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGTTACTAACCACACAGTaGTCCCAGTTTATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWLLTTQ*SQFIRL
Trigger: CAGCCTGATAAACTGGGACCACTGTGTGGTTAGTAA...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCACCGTTTCCCTTCTTaGTCCTTCAGTTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSEHRFPS*SFSCQK
Trigger: CTTTTGGCAACTGAAGGACCAAGAAGGGAAACGGTG...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGTGGCAAGGCACAGGGTaGAAGGATCCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKWQGTG*KDPAGP
Trigger: AGGCCCTGCAGGATCCTTTCACCCTGTGCCTTGCCA...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGTTACTGAAGCGCCACTaGGGCACAAAGACAGTTATG +
Preference number: 4 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVLLKRH*GTKTVM
Trigger: CATAACTGTCTTTGTGCCTCAGTGGCGCTTCAGTAA...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR TCA 90 bp CACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGGTCATCAGGTACCATaGAGAGGTTTCCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: HFMDLSQSGFPDPKHQLRGHQVP*RGFPQR
Trigger: CCTTTGTGGGAAACCTCTTCATGGTACCTGATGACC...CCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp GAGTTCCTCCAGGGAAGGAACGCTTCAGGTCATGGAGAAGTTCAAGGGGAAAATCCAAAGTGGCTTCCCTaGTCCAAAGCACCAACTCAG +
Preference number: 4 (lower is better)
Translates to: EFLQGRNASGHGEVQGENPKWLP*SKAPTQ
Trigger: CTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGG...ATTTTCCCCTTGAACTTCTCCATGACCTGAAGCGTTCCTTCCCTGGAGGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp ACTCAGTCAACCAGGGCCCTTAGCACAAAAGGGCAGAAGACACTTTTGGTCTACCCAAAGTGGCTTCCCTaGTCCAAAGCACCAACTCAG +
Preference number: 4 (lower is better)
Translates to: TQSTRALSTKGQKTLLVYPKWLP*SKAPTQ
Trigger: CTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGG...GTAGACCAAAAGTGTCTTCTGCCCTTTTGTGCTAAGGGCCCTGGTTGACTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCGTGCTAAGGCAAAGTTaGGAAGTTAAGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: HHYTRHAVFNSLCHSEGGVLRQS*EVKAEQ
Trigger: CTGCTCAGCCTTAACTTCTCAACTTTGCCTTAGCAC...GCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGGGCTTCATCGATTGGTaGAAAATCGACGTGTTCATC +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQGFIDW*KIDVFI
Trigger: GATGAACACGTCGATTTTTCACCAATCGATGAAGCC...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAAGTGAATGTCACCCTAGATaGTTCTTCCCCAAAGACGGG +
Preference number: 4 (lower is better)
Translates to: SSSPHSLQKPCAKAKLRSECHPR*FFPKDG
Trigger: CCCGTCTTTGGGGAAGAATCATCTAGGGTGACATTC...ACTTCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGATTACAATTACAGAGTaGGAGGATGCCACCACTTCT +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRITITE*EDATTS
Trigger: AGAAGTGGTGGCATCCTCTCACTCTGTAATTGTAAT...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAAAGAAATTGAGACCCTaGAAAAACAGTGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRKKLRP*KNSGEW
Trigger: CCACTCCCCACTGTTTTTTCAGGGTCTCAATTTCTT...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAAAGAAATTGAGACCCTaGAAAAACAGTGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PSSSPHSLQKPCAKAKLRKKLRP*KNSGEW
Trigger: CCACTCCCCACTGTTTTTTCAGGGTCTCAATTTCTT...TCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TTGCTCAAAAGGGATGCAGCCATTATAGGGCACGTTATAGTGAGAATGCAGTGTCCAGATGGGCTGACGTaGTCCAGGCCAGGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: LLKRDAAIIGHVIVRMQCPDGLT*SRPGSQ
Trigger: TTGACTGCCTGGCCTGGAGCACGTCAGCCCATCTGG...ACACTGCATTCTCACTATAACGTGCCCTATAATGGCTGCATCCCTTTTGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGGCGTTCTCTGATGATTaGCATCCACTTCTCAGACTC +
Preference number: 4 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVAFSDD*HPLLRL
Trigger: GAGTCTGAGAAGTGGATGGCAATCATCAGAGAACGC...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR GCA 90 bp ACTCAGTCAACCAGGGCCCTTAGCACAAAAGGGCAGAAGACACTTTTGGTCTACCCCGGGTCTTCCGAATaGCACCACTACCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: TQSTRALSTKGQKTLLVYPGSSE*HHYLFP
Trigger: AGGAAAAAGGTAGTGGTGGCATTCGGAAGACCCGGG...GTAGACCAAAAGTGTCTTCTGCCCTTTTGTGCTAAGGGCCCTGGTTGACTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCGTATTCAACTCCCTGTaGCACTCAGAGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLVFNSL*HSEGGR
Trigger: TCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATAC...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGACACTTTTGGTCTACTaGACACCCACCATCACTGAA +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQTLLVY*TPTITE
Trigger: TTCAGTGATGGTGGGTGTGCAGTAGACCAAAAGTGT...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp GGGGAACGGGGTAACTCAGACCTCTGTAGCTATGCACACACCAGAGCACTGGTCTCACCAAATGGCAAGTaGATTACTAACCACACAGTG +
Preference number: 4 (lower is better)
Translates to: GERGNSDLCSYAHTRALVSPNGK*ITNHTV
Trigger: CACTGTGTGGTTAGTAATGCACTTGCCATTTGGTGA...GACCAGTGCTCTGGTGTGTGCATAGCTACAGAGGTCTGAGTTACCCCGTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AGTTTATCAGGCTGCAGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTACCATGGGCCACATGCTaGTGCCCTTTCGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLSGCSRTKSTSLSIRSLPWATC*CPFAWA
Trigger: GGCCCAGGCGAAAGGGCAGCAGCATGTGGCCCATGG...TAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCTGCAGCCTGATAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATAGAAGCCAGTGCTCCTaGCCCCTGCCCACTAGACGC +
Preference number: 4 (lower is better)
Translates to: SRTKSTSLSIRSLGLASHRSQCS*PLPTRR
Trigger: GCGTCTAGTGGGCAGGGGCCAGGAGCACTGGCTTCT...ATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATGTCTCCACAGTGCCATaGGGGTTCCGGTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SRTKSTSLSIRSLGLASHVSTVP*GFRCRW
Trigger: CCACCTGCACCGGAACCCCCATGGCACTGTGGAGAC...ATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ACTCAGTCAACCAGGGCCCTTAGCACAAAAGGGCAGAAGACACTTTTGGTCTACCTAGGGTGTGGATCCTaGAGACAAAGGACCCACATC +
Preference number: 4 (lower is better)
Translates to: TQSTRALSTKGQKTLLVYLGCGS*RQRTHI
Trigger: GATGTGGGTCCTTTGTCTCCAGGATCCACACCCTAG...GTAGACCAAAAGTGTCTTCTGCCCTTTTGTGCTAAGGGCCCTGGTTGACTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGTTAAAATCTAGGGTGTaGATCCTGGAGACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILLKSRV*ILETKD
Trigger: GTCCTTTGTCTCCAGGATCCACACCCTAGATTTTAA...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCTCCCTCTGCCTTCTTCACTAGCTCACTCCACCCTATCGTGGCCCAGTCCACATTAAAATCTAGGGTGTaGATCCTGGAGACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: SPSAFFTSSLHPIVAQSTLKSRV*ILETKD
Trigger: GTCCTTTGTCTCCAGGATCCACACCCTAGATTTTAA...TGTGGACTGGGCCACGATAGGGTGGAGTGAGCTAGTGAAGAAGGCAGAGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGCACCTGCCCCCAGCCTaGGTCAGTATGGTACAGTGG +
Preference number: 4 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKHLPPA*VSMVQW
Trigger: CCACTGTACCATACTGACCCAGGCTGGGGGCAGGTG...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ACTCAGTCAACCAGGGCCCTTAGCACAAAAGGGCAGAAGACACTTTTGGTCTACTCCCACAGCGAACACTaGCCACTGGCTACCAGTATT +
Preference number: 4 (lower is better)
Translates to: TQSTRALSTKGQKTLLVYSHSEH*PLATSI
Trigger: AATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGA...GTAGACCAAAAGTGTCTTCTGCCCTTTTGTGCTAAGGGCCCTGGTTGACTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TGTTCTGTTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCATCAGGTTGGGACATTCTACACGCCAGGTaGTGGTGCGCTCAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: CSVAPPYCLKAVISSGWDILHAR*WCAQVR
Trigger: TCTCACCTGAGCGCACCACCACCTGGCGTGTAGAAT...GTCCCAACCTGATGAGATTACGGCCTTGAGACAATAAGGTGGAGCAACAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAAGTAACCTCGTAACCAAATaGGAAGCTGCAGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SSSPHSLQKPCAKAKLRSNLVTK*EAAARL
Trigger: AAGCCTGGCTGCAGCTTCCCATTTGGTTACGAGGTT...ACTTCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAGGGAAAATATCCAAATaGCTCTGTCTCCAAATGGGG +
Preference number: 4 (lower is better)
Translates to: PSSSPHSLQKPCAKAKLRGKISK*LCLQMG
Trigger: CCCCATTTGGAGACAGAGCCATTTGGATATTTTCCC...TCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCCTTCAAGGCTGAGAGGACCCCTGTACCTTCCCTCTTTCCTGCTCTAGGGGTTGTTCCTGGTCACCTTTaGGACCAAGTAATTGCAAAC +
Preference number: 4 (lower is better)
Translates to: SFKAERTPVPSLFPALGVVPGHL*DQVIAN
Trigger: GTTTGCAATTACTTGGTCCCAAAGGTGACCAGGAAC...AACCCCTAGAGCAGGAAAGAGGGAAGGTACAGGGGTCCTCTCAGCCTTGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CATCATTACACTCGCCATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCCACACACCAGAGCACTaGTCTTTTCCAGGCAAAATG +
Preference number: 4 (lower is better)
Translates to: HHYTRHAVFNSLCHSEGGHTPEH*SFPGKM
Trigger: CATTTTGCCTGGAAAAGACCAGTGCTCTGGTGTGTG...GCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATGGCGAGTGTAATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAAGTAGCTTTTGCAGGAAGTaGCTCTCTCTGACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SSSPHSLQKPCAKAKLRSSFCRK*LSLTLA
Trigger: TGCCAAAGTCAGAGAGAGTCACTTCCTGCAAAAGCT...ACTTCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR TCA 90 bp ACTCAGTCAACCAGGGCCCTTAGCACAAAAGGGCAGAAGACACTTTTGGTCTACGGTCATCAGGTACCATaGAGAGGTTTCCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: TQSTRALSTKGQKTLLVYGHQVP*RGFPQR
Trigger: CCTTTGTGGGAAACCTCTTCATGGTACCTGATGACC...GTAGACCAAAAGTGTCTTCTGCCCTTTTGTGCTAAGGGCCCTGGTTGACTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCGGTCATCAGGTACCATaGAGAGGTTTCCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLGHQVP*RGFPQR
Trigger: CCTTTGTGGGAAACCTCTTCATGGTACCTGATGACC...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR GCA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAAGCAGAAGTGTGCCTTaGTTTATGCAACATACGTCT +
Preference number: 4 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRSRSVP*FMQHTS
Trigger: AGACGTATGTTGCATAAAGCAAGGCACACTTCTGCT...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp GAGTTCCTCCAGGGAAGGAACGCTTCAGGTCATGGAGAAGTTCAAGGGGAAAATTGTAGTCACCCTGGATaGTGTCAGAGTGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: EFLQGRNASGHGEVQGENCSHPG*CQSAIR
Trigger: CCTAATGGCACTCTGACAGCATCCAGGGTGACTACA...ATTTTCCCCTTGAACTTCTCCATGACCTGAAGCGTTCCTTCCCTGGAGGAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCTCTTGGTCCTTCAGTTaGCAAAAGAACTTGTCACAA +
Preference number: 4 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSSWSFS*QKNLSQ
Trigger: TTGTGACAAGTTCTTTTGGCAACTGAAGGACCAAGA...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ACACACATAAAGCAGAAGTGTGCCTTGCTTTATGCAACATACGTCTTCCATAGATGGCGGAGGTCTGGCTaGCCAGGCACATTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: THIKQKCALLYATYVFHRWRRSG*PGTLAR
Trigger: CCTTGCCAATGTGCCTGGCCAGCCAGACCTCCGCCA...TCTATGGAAGACGTATGTTGCATAAAGCAAGGCACACTTCTGCTTTATGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATTGGCAATGCCCCGGCTaGAGAAGTAGTGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SRTKSTSLSIRSLGLASHWQCPG*RSSAGG
Trigger: GCCTCCAGCACTACTTCTCCAGCCGGGGCATTGCCA...ATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ACTCAGTCAACCAGGGCCCTTAGCACAAAAGGGCAGAAGACACTTTTGGTCTACCCCCTGTGTCCTGGCTaGCTTCTTCAGAAATTCATC +
Preference number: 4 (lower is better)
Translates to: TQSTRALSTKGQKTLLVYPLCPG*LLQKFI
Trigger: GATGAATTTCTGAAGAAGCCAGCCAGGACACAGGGG...GTAGACCAAAAGTGTCTTCTGCCCTTTTGTGCTAAGGGCCCTGGTTGACTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGGTCAGTATGGTACAGTaGTGTAAATCACCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRVSMVQ*CKSPKR
Trigger: CCTTTTTGGTGATTTACACCACTGTACCATACTGAC...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCGGCAGAAGACACTTTTaGTCTACTGCACACCCACCA +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLGRRHF*STAHPP
Trigger: TGGTGGGTGTGCAGTAGACCAAAAGTGTCTTCTGCC...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAAAAACAGTGGGGAGTaGCATCACTCAATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLKNSGE*HHSMPG
Trigger: CCCTGGCATTGAGTGATGCCACTCCCCACTGTTTTT...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 72 bp AATCAGGGTGAAGAAAGCATGTCAGTAACAGCAGAGTaGGTCTGGTGGCCAGTCAAGTGCCTTCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: NQGEESMSVTAE*VWWPVKCLPTL
Trigger: CAGAGTTGGAAGGCACTTGACTGGCCACCAGACCAACTCTGCTGTTACTGACATGCTTTCTTCACCCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp ACCTACTGTGTAAATGTAGATTTTGGAGGTTGCTCAAAAGGGATGCAGCCATTACTCACTCCTTGGCACTaGGCACCCAGCAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TYCVNVDFGGCSKGMQPLLTPWH*APSKAE
Trigger: CTCAGCCTTGCTGGGTGCTCAGTGCCAAGGAGTGAG...TAATGGCTGCATCCCTTTTGAGCAACCTCCAAAATCTACATTTACACAGTAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp AAAGAACTTGTCACAAGTTTGGGACATCAGGTTATGATAAAGATAGACACTAGATGCCCCTCCACCCACTaGCTGTGGCCTGAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: KELVTSLGHQVMIKIDTRCPSTH*LWPEGH
Trigger: GTGGCCCTCAGGCCACAGTCAGTGGGTGGAGGGGCA...TCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TATTGTCATTGCAGAGCATGGCTTCATCGATTGGTGAAAAATCGACGTGTTCATCCTGCAGGGCCTCCTTaGAACGCTGTGTGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: YCHCRAWLHRLVKNRRVHPAGPP*NAVCQS
Trigger: TGACTGGCACACAGCGTTTCAAGGAGGCCCTGCAGG...ATGAACACGTCGATTTTTCACCAATCGATGAAGCCATGCTCTGCAATGACAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TTGCTCAAAAGGGATGCAGCCATTATAGGGCACGTTATAGTGAGAATGCAGTGTCCTCAGACAGTTGGTTaGTGTCCCGGCAGTATGGCT +
Preference number: 4 (lower is better)
Translates to: LLKRDAAIIGHVIVRMQCPQTVG*CPGSMA
Trigger: AGCCATACTGCCGGGACATCAACCAACTGTCTGAGG...ACACTGCATTCTCACTATAACGTGCCCTATAATGGCTGCATCCCTTTTGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCTGGATTCCAGGAAGTTaGCTGGCTCTGTATTGTTCC +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLWIPGS*LALYCS
Trigger: GGAACAATACAGAGCCAGTCAACTTCCTGGAATCCA...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp ACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATCTGACTCCAAAAAGGAAGGGGTaGGGACACAAGGACCCTCCC +
Preference number: 4 (lower is better)
Translates to: TKSTSLSIRSLGLASHLTPKRKG*GHKDPP
Trigger: GGGAGGGTCCTTGTGTCCTCACCCCTTCCTTTTTGG...AGTCAGATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAAGTCCCAGTTTATCAGGCTaGAGCAGAACAAAGTCAACA +
Preference number: 4 (lower is better)
Translates to: SSSPHSLQKPCAKAKLRSPSLSG*SRTKST
Trigger: TGTTGACTTTGTTCTGCTGCAGCCTGATAAACTGGG...ACTTCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGTCTTGGTCCTTCAGTTaGCAAAAGAACTTGTCACAA +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQSWSFS*QKNLSQ
Trigger: TTGTGACAAGTTCTTTTGGCAACTGAAGGACCAAGA...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGTTCCCATTGTTCTGTTaGTCCACCTTATTGTCTCAA +
Preference number: 4 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQFPLFC*STLLSQ
Trigger: TTGAGACAATAAGGTGGAGCAACAGAACAATGGGAA...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp ACACACATAAAGCAGAAGTGTGCCTTGCTTTATGCAACATACGTCTTCCATAGAGACAGCGTGCCATCATaGTGCTGGAGGGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: THIKQKCALLYATYVFHRDSVPS*CWRARR
Trigger: CCTTCTGGCCCTCCAGCAGCATGATGGCACGCTGTC...TCTATGGAAGACGTATGTTGCATAAAGCAAGGCACACTTCTGCTTTATGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp GAGTTCCTCCAGGGAAGGAACGCTTCAGGTCATGGAGAAGTTCAAGGGGAAAATAGTGGCATCACTCAATaGCAGGGAAAAGTCCACCTA +
Preference number: 4 (lower is better)
Translates to: EFLQGRNASGHGEVQGENSGITQ*QGKVHL
Trigger: TAGGTGGACTTTTCCCTGGCATTGAGTGATGCCACT...ATTTTCCCCTTGAACTTCTCCATGACCTGAAGCGTTCCTTCCCTGGAGGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AAAGAACTTGTCACAAGTTTGGGACATCAGGTTATGATAAAGATAGACACTAGAGTGAGCCTGGCGCCCTaGGCACCAGATGGGCTGACG +
Preference number: 4 (lower is better)
Translates to: KELVTSLGHQVMIKIDTRVSLAP*APDGLT
Trigger: CGTCAGCCCATCTGGTGCCCAGGGCGCCAGGCTCAC...TCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATAGAGGCTCCGGAAGATaGTCCTGGCGTGAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SRTKSTSLSIRSLGLASHRGSGR*SWREVP
Trigger: TGGGACTTCACGCCAGGACCATCTTCCGGAGCCTCT...ATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGCCGTCAATGACAATATaGCGGAGGTCTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKPSMTI*RRSGWP
Trigger: TGGCCAGCCAGACCTCCGCCATATTGTCATTGACGG...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TTGCTCAAAAGGGATGCAGCCATTATAGGGCACGTTATAGTGAGAATGCAGTGTGAGCATCTTGTTCTCTaGCCATCCAGAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LLKRDAAIIGHVIVRMQCEHLVL*PSRAAA
Trigger: GGCTGCTGCTCTGGATGGCCAGAGAACAAGATGCTC...ACACTGCATTCTCACTATAACGTGCCCTATAATGGCTGCATCCCTTTTGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ACTCAGTCAACCAGGGCCCTTAGCACAAAAGGGCAGAAGACACTTTTGGTCTACCACCGTTTCCCTTCTTaGTCCTTCAGTTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: TQSTRALSTKGQKTLLVYHRFPS*SFSCQK
Trigger: CTTTTGGCAACTGAAGGACCAAGAAGGGAAACGGTG...GTAGACCAAAAGTGTCTTCTGCCCTTTTGTGCTAAGGGCCCTGGTTGACTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CTCCAAGAGGCTTTCCTCTATGTTCTCATTTCTCCTCCCAACAGGTATTTTTACAGCCTAAGTAGGTCGTaGCAAGGGCCTGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LQEAFLYVLISPPNRYFYSLSRS*QGPEAC
Trigger: ACAGGCCTCAGGCCCTTGCCACGACCTACTTAGGCT...GTAAAAATACCTGTTGGGAGGAGAAATGAGAACATAGAGGAAAGCCTCTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GCTTCATCGATTGGTGAAAAATCGACGTGTTCATCTCAACACCAGGAAGTGCATGCGAACACTGGCCACTaGCTACCAGTATTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: ASSIGEKSTCSSQHQEVHANTGH*LPVFLP
Trigger: GGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGC...ATGCACTTCCTGGTGTTGAGATGAACACGTCGATTTTTCACCAATCGATGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp GCTTCATCGATTGGTGAAAAATCGACGTGTTCATCTCAACACCAGGAAGTGCATTCTTCTACCCGGCTCTaGGCCATGACAAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ASSIGEKSTCSSQHQEVHSSTRL*AMTKAS
Trigger: TGAAGCCTTTGTCATGGCTCAGAGCCGGGTAGAAGA...ATGCACTTCCTGGTGTTGAGATGAACACGTCGATTTTTCACCAATCGATGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TATTGTCATTGCAGAGCATGGCTTCATCGATTGGTGAAAAATCGACGTGTTCATCCCCTGGAAGGATGCTaGGCCTTAGAAGACCCCTGT +
Preference number: 4 (lower is better)
Translates to: YCHCRAWLHRLVKNRRVHPLEGC*ALEDPC
Trigger: ACAGGGGTCTTCTAAGGCTCAGCATCCTTCCAGGGG...ATGAACACGTCGATTTTTCACCAATCGATGAAGCCATGCTCTGCAATGACAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp AGTTTATCAGGCTGCAGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTACCCCTGGAAGGATGCTaGGCCTTAGAAGACCCCTGT +
Preference number: 4 (lower is better)
Translates to: SLSGCSRTKSTSLSIRSLPLEGC*ALEDPC
Trigger: ACAGGGGTCTTCTAAGGCTCAGCATCCTTCCAGGGG...TAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCTGCAGCCTGATAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp CTCCAAGAGGCTTTCCTCTATGTTCTCATTTCTCCTCCCAACAGGTATTTTTACCTCTTGAGAGCTGGCTaGGGTCCTGACTCGGTAAGA +
Preference number: 4 (lower is better)
Translates to: LQEAFLYVLISPPNRYFYLLRAG*GPDSVR
Trigger: TCTTACCGAGTCAGGACCTCAGCCAGCTCTCAAGAG...GTAAAAATACCTGTTGGGAGGAGAAATGAGAACATAGAGGAAAGCCTCTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TTGCTCAAAAGGGATGCAGCCATTATAGGGCACGTTATAGTGAGAATGCAGTGTCCCAGGAGGGGACTTTaGCTTTTTCTCCAACCTCGT +
Preference number: 4 (lower is better)
Translates to: LLKRDAAIIGHVIVRMQCPRRGL*LFLQPR
Trigger: ACGAGGTTGGAGAAAAAGTCAAAGTCCCCTCCTGGG...ACACTGCATTCTCACTATAACGTGCCCTATAATGGCTGCATCCCTTTTGAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGACTACCAGCCCAGTCTaGCTGCGGAGTATGATGAAG +
Preference number: 4 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKTTSPV*LRSMMK
Trigger: CTTCATCATACTCCGCAGTCAGACTGGGCTGGTAGT...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TGTTCTGTTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCATCAGGTTGGGACTCTTCTCTCCCCTGCTaGTGTTTACCATGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: CSVAPPYCLKAVISSGWDSSLPC*CLPCSA
Trigger: TGCAGAACATGGTAAACAGCAGCAGGGGAGAGAAGA...GTCCCAACCTGATGAGATTACGGCCTTGAGACAATAAGGTGGAGCAACAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAAAGCATACTTTAGGCTaGACTAAAGTAAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: PSSSPHSLQKPCAKAKLRKHTLG*TKVRST
Trigger: AGTACTCCTTACTTTAGTGCAGCCTAAAGTATGCTT...TCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AGAACAGAACCCAGGGGCACCTGTCCTACTTCTTTATCTGGTCTTGGATTCCAGTCATTACACTCGCCATaGAGTATTCAACTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RTEPRGTCPTSLSGLGFQSLHSP*SIQLPV
Trigger: CACAGGGAGTTGAATACTGCATGGCGAGTGTAATGA...CTGGAATCCAAGACCAGATAAAGAAGTAGGACAGGTGCCCCTGGGTTCTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp CTCCAAGAGGCTTTCCTCTATGTTCTCATTTCTCCTCCCAACAGGTATTTTTACGCCGTTTCGCCCCAGTaGGTCATCAGGTACCATGAA +
Preference number: 4 (lower is better)
Translates to: LQEAFLYVLISPPNRYFYAVSPQ*VIRYHE
Trigger: TTCATGGTACCTGATGACCCACTGGGGCGAAACGGC...GTAAAAATACCTGTTGGGAGGAGAAATGAGAACATAGAGGAAAGCCTCTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GCTTCATCGATTGGTGAAAAATCGACGTGTTCATCTCAACACCAGGAAGTGCATAGCTCAGCTTGGAGGTaGAGCCAACAGTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: ASSIGEKSTCSSQHQEVHSSAWR*SQQSQS
Trigger: AGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCT...ATGCACTTCCTGGTGTTGAGATGAACACGTCGATTTTTCACCAATCGATGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCTTACTAACCACACAGTaGTCCCAGTTTATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLLLTTQ*SQFIRL
Trigger: CAGCCTGATAAACTGGGACCACTGTGTGGTTAGTAA...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TGTTCTGTTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCATCAGGTTGGGACCTTGGCTCATCTCTTTaGCCTAGATTCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: CSVAPPYCLKAVISSGWDLGSSL*PRFSWD
Trigger: ATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAG...GTCCCAACCTGATGAGATTACGGCCTTGAGACAATAAGGTGGAGCAACAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGGTAATCTCATCAGGTTaGGACATTAATCTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWVISSG*DINLFN
Trigger: GTTGAAAAGATTAATGTCCCAACCTGATGAGATTAC...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATCTGACTGGTGCAAGCTGTCTTTaGGCGACAGCGTGCCATCAT +
Preference number: 4 (lower is better)
Translates to: TKSTSLSIRSLGLASHLTGASCL*ATACHH
Trigger: ATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACC...AGTCAGATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATAACCAGGAGGAGCAGTaGGCTCCTTCAAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SRTKSTSLSIRSLGLASHNQEEQ*APSRLR
Trigger: TCTCAGCCTTGAAGGAGCCCACTGCTCCTCCTGGTT...ATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ACTCAGTCAACCAGGGCCCTTAGCACAAAAGGGCAGAAGACACTTTTGGTCTACGTTCCTGGTCACCTTTaGGACCAAGTAATTGCAAAC +
Preference number: 4 (lower is better)
Translates to: TQSTRALSTKGQKTLLVYVPGHL*DQVIAN
Trigger: GTTTGCAATTACTTGGTCCCAAAGGTGACCAGGAAC...GTAGACCAAAAGTGTCTTCTGCCCTTTTGTGCTAAGGGCCCTGGTTGACTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp ACACACATAAAGCAGAAGTGTGCCTTGCTTTATGCAACATACGTCTTCCATAGAAGCACTCCAGTACACTaGGAGGCTCCGGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: THIKQKCALLYATYVFHRSTPVH*EAPEDG
Trigger: ACCATCTTCCGGAGCCTCTCAGTGTACTGGAGTGCT...TCTATGGAAGACGTATGTTGCATAAAGCAAGGCACACTTCTGCTTTATGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp AGTTTATCAGGCTGCAGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTACCTCAGACAGTTGGTTaGTGTCCCGGCAGTATGGCT +
Preference number: 4 (lower is better)
Translates to: SLSGCSRTKSTSLSIRSLPQTVG*CPGSMA
Trigger: AGCCATACTGCCGGGACATCAACCAACTGTCTGAGG...TAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCTGCAGCCTGATAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTTCTCACAGAAAGGGCTaGGCTGGAGGCGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPSHRKG*AGGGWS
Trigger: GCTCCAGCCGCCTCCAGCTCAGCCCTTTCTGTGAGA...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TATTGTCATTGCAGAGCATGGCTTCATCGATTGGTGAAAAATCGACGTGTTCATACCTGGCAGGAATCCTaGCCCATGCCCTTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: YCHCRAWLHRLVKNRRVHTWQES*PMPLKQ
Trigger: TTGCTTCAAGGGCATGGGTCAGGATTCCTGCCAGGT...ATGAACACGTCGATTTTTCACCAATCGATGAAGCCATGCTCTGCAATGACAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp AGAACAGAACCCAGGGGCACCTGTCCTACTTCTTTATCTGGTCTTGGATTCCAGATTACAATTACAGAGTaGGAGGATGCCACCACTTCT +
Preference number: 4 (lower is better)
Translates to: RTEPRGTCPTSLSGLGFQITITE*EDATTS
Trigger: AGAAGTGGTGGCATCCTCTCACTCTGTAATTGTAAT...CTGGAATCCAAGACCAGATAAAGAAGTAGGACAGGTGCCCCTGGGTTCTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTCCAGGTAGGCATGGCTaGTGCCCCCAGCCCATGTTC +
Preference number: 4 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPPGRHG*CPQPMF
Trigger: GAACATGGGCTGGGGGCAGCAGCCATGCCTACCTGG...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251343.9
CDS-3UTR GCA 90 bp ACCTACTGTGTAAATGTAGATTTTGGAGGTTGCTCAAAAGGGATGCAGCCATTAACAGCCAGGGGCAACTaGAACAGAGCCTCTCTATGG +
Preference number: 4 (lower is better)
Translates to: TYCVNVDFGGCSKGMQPLTARGN*NRASLW
Trigger: CCATAGAGAGGCTCTGTTGCAGTTGCCCCTGGCTGT...TAATGGCTGCATCCCTTTTGAGCAACCTCCAAAATCTACATTTACACAGTAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp ACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATCTGACTCCCGGGTCTTCCGAATaGCACCACTACCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: TKSTSLSIRSLGLASHLTPGSSE*HHYLFP
Trigger: AGGAAAAAGGTAGTGGTGGCATTCGGAAGACCCGGG...AGTCAGATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AAAGAACTTGTCACAAGTTTGGGACATCAGGTTATGATAAAGATAGACACTAGACACGCCAGGTGGTGGTaGGCTCAGGTGAGAAACGGG +
Preference number: 4 (lower is better)
Translates to: KELVTSLGHQVMIKIDTRHARWW*AQVRNG
Trigger: CCCGTTTCTCACCTGAGCGCACCACCACCTGGCGTG...TCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TTGCTCAAAAGGGATGCAGCCATTATAGGGCACGTTATAGTGAGAATGCAGTGTGCCAGGTCCCGGAACTaGTCATTGGAGACAATTATC +
Preference number: 4 (lower is better)
Translates to: LLKRDAAIIGHVIVRMQCARSRN*SLETII
Trigger: GATAATTGTCTCCAATGACCAGTTCCGGGACCTGGC...ACACTGCATTCTCACTATAACGTGCCCTATAATGGCTGCATCCCTTTTGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ACTCAGTCAACCAGGGCCCTTAGCACAAAAGGGCAGAAGACACTTTTGGTCTACTGGCCTAGATTCTCCTaGGATTTACTTCAAGGAATG +
Preference number: 4 (lower is better)
Translates to: TQSTRALSTKGQKTLLVYWPRFS*DLLQGM
Trigger: CATTCCTTGAAGTAAATCCCAGGAGAATCTAGGCCA...GTAGACCAAAAGTGTCTTCTGCCCTTTTGTGCTAAGGGCCCTGGTTGACTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCCTTCAAGGCTGAGAGGACCCCTGTACCTTCCCTCTTTCCTGCTCTAGGGGTTGTAATCTCATCAGGTTaGGACATTAATCTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: SFKAERTPVPSLFPALGVVISSG*DINLFN
Trigger: GTTGAAAAGATTAATGTCCCAACCTGATGAGATTAC...AACCCCTAGAGCAGGAAAGAGGGAAGGTACAGGGGTCCTCTCAGCCTTGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATCACCAATTCTTCCCCTaGATACACATCGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: SRTKSTSLSIRSLGLASHHQFFP*IHIGDL
Trigger: CAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTG...ATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTCTCACTCCTTGGCACTaGGCACCCAGCAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPLTPWH*APSKAE
Trigger: CTCAGCCTTGCTGGGTGCTCAGTGCCAAGGAGTGAG...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTGCCATCCATGACTCGTaGGGGTGTGAGGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPAIHDS*GCEGEQ
Trigger: CTGCTCTCCCTCACACCCTCACGAGTCATGGATGGC...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp ACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATCTGACTTCATTGTCACCTCTTTaGCCAGCCTGTCTCCAACAC +
Preference number: 4 (lower is better)
Translates to: TKSTSLSIRSLGLASHLTSLSPL*PACLQH
Trigger: GTGTTGGAGACAGGCTGGTCAAAGAGGTGACAATGA...AGTCAGATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTGGGCTCCTTCAAGGCTaGGAGGACCCCTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPGLLQG*EDPCTF
Trigger: GAAGGTACAGGGGTCCTCTCAGCCTTGAAGGAGCCC...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp ACACACATAAAGCAGAAGTGTGCCTTGCTTTATGCAACATACGTCTTCCATAGAACTACCAGCCCAGTCTaGCTGCGGAGTATGATGAAG +
Preference number: 4 (lower is better)
Translates to: THIKQKCALLYATYVFHRTTSPV*LRSMMK
Trigger: CTTCATCATACTCCGCAGTCAGACTGGGCTGGTAGT...TCTATGGAAGACGTATGTTGCATAAAGCAAGGCACACTTCTGCTTTATGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp ACACACATAAAGCAGAAGTGTGCCTTGCTTTATGCAACATACGTCTTCCATAGAAACCAAATGGGAAGCTaGAGCCAGGCTTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: THIKQKCALLYATYVFHRNQMGS*SQASWR
Trigger: TCTCCAGGAAGCCTGGCTGCAGCTTCCCATTTGGTT...TCTATGGAAGACGTATGTTGCATAAAGCAAGGCACACTTCTGCTTTATGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGTTGGGACCAAGTAATTaGAAACAATTATACACACCA +
Preference number: 4 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVLGPSN*KQLYTP
Trigger: TGGTGTGTATAATTGTTTGCAATTACTTGGTCCCAA...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TATTGTCATTGCAGAGCATGGCTTCATCGATTGGTGAAAAATCGACGTGTTCATCCTTCAGGTACTCCTTaGCTCTGCTGGCGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: YCHCRAWLHRLVKNRRVHPSGTP*LCWRFP
Trigger: AGGAAAACGCCAGCAGAGCCAAGGAGTACCTGAAGG...ATGAACACGTCGATTTTTCACCAATCGATGAAGCCATGCTCTGCAATGACAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGAGATGCAGTGCAGTTTaGGCGGGTAGTGGATTTCAT +
Preference number: 4 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKRCSAV*AGSGFH
Trigger: ATGAAATCCACTACCCGCCCAAACTGCACTGCATCT...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ACCTACTGTGTAAATGTAGATTTTGGAGGTTGCTCAAAAGGGATGCAGCCATTAAGCTCAGCTTGGAGGTaGAGCCAACAGTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: TYCVNVDFGGCSKGMQPLSSAWR*SQQSQS
Trigger: AGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCT...TAATGGCTGCATCCCTTTTGAGCAACCTCCAAAATCTACATTTACACAGTAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GAGTTCCTCCAGGGAAGGAACGCTTCAGGTCATGGAGAAGTTCAAGGGGAAAATAGTGCCTTCCAACTCTaGTTCTTTCATTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: EFLQGRNASGHGEVQGENSAFQL*FFHFPD
Trigger: ATCTGGAAAATGAAAGAACCAGAGTTGGAAGGCACT...ATTTTCCCCTTGAACTTCTCCATGACCTGAAGCGTTCCTTCCCTGGAGGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGTTTATCAGGCTGCAGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTACACCAATTCTTCCCCTaGATACACATCGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: SLSGCSRTKSTSLSIRSLHQFFP*IHIGDL
Trigger: CAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTG...TAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCTGCAGCCTGATAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp GCTTCATCGATTGGTGAAAAATCGACGTGTTCATCTCAACACCAGGAAGTGCATTCTGTAAACAACACCTaGATACAACAGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASSIGEKSTCSSQHQEVHSVNNT*IQQESC
Trigger: GCAGCTCTCCTGTTGTATTCAGGTGTTGTTTACAGA...ATGCACTTCCTGGTGTTGAGATGAACACGTCGATTTTTCACCAATCGATGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AAAGAACTTGTCACAAGTTTGGGACATCAGGTTATGATAAAGATAGACACTAGACGCTCCACATGGGGCTaGTGTTCCCGAACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: KELVTSLGHQVMIKIDTRRSTWG*CSRTLF
Trigger: GAACAAGGTTCGGGAACAGCAGCCCCATGTGGAGCG...TCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp CTCCAAGAGGCTTTCCTCTATGTTCTCATTTCTCCTCCCAACAGGTATTTTTACTCTTCTCTCCCCTGCTaGTGTTTACCATGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LQEAFLYVLISPPNRYFYSSLPC*CLPCSA
Trigger: TGCAGAACATGGTAAACAGCAGCAGGGGAGAGAAGA...GTAAAAATACCTGTTGGGAGGAGAAATGAGAACATAGAGGAAAGCCTCTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp ACCTACTGTGTAAATGTAGATTTTGGAGGTTGCTCAAAAGGGATGCAGCCATTATGGTGGCCAGTCAAGTaGCTTCCAACTCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: TYCVNVDFGGCSKGMQPLWWPVK*LPTLVL
Trigger: AAGAACCAGAGTTGGAAGGCACTTGACTGGCCACCA...TAATGGCTGCATCCCTTTTGAGCAACCTCCAAAATCTACATTTACACAGTAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AAAGAACTTGTCACAAGTTTGGGACATCAGGTTATGATAAAGATAGACACTAGAAATATGGCGGAGGTCTaGCTGGCCAGGCACATTGGC +
Preference number: 4 (lower is better)
Translates to: KELVTSLGHQVMIKIDTRNMAEV*LARHIG
Trigger: GCCAATGTGCCTGGCCAGCCAGACCTCCGCCATATT...TCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGGATCAGTTCACTTTATaGACCTGTCCCAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKDQFTL*TCPKVA
Trigger: AGCCACTTTGGGACAGGTCCATAAAGTGAACTGATC...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATCTGACTCTTGGCTCATCTCTTTaGCCTAGATTCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: TKSTSLSIRSLGLASHLTLGSSL*PRFSWD
Trigger: ATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAG...AGTCAGATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATCTGACTAGAGCTGAAGCCATCTaGTTCTTAGATTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TKSTSLSIRSLGLASHLTRAEAI*FLDSSP
Trigger: GGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCT...AGTCAGATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp ACCTACTGTGTAAATGTAGATTTTGGAGGTTGCTCAAAAGGGATGCAGCCATTAGGTATCAGACAGGGTTaGAATGTCTTCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TYCVNVDFGGCSKGMQPLGIRQG*NVFSGL
Trigger: CAGCCCAGAGAAGACATTCCAACCCTGTCTGATACC...TAATGGCTGCATCCCTTTTGAGCAACCTCCAAAATCTACATTTACACAGTAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 72 bp TACAATGAGCAGTCTCTCTCATCACCGTTTCCCTTCTaGGTCCTTCAGTTGCCAAAAGAACTTGTCACAAGT +
Preference number: 4 (lower is better)
Translates to: YNEQSLSSPFPF*VLQLPKELVTS
Trigger: ACTTGTGACAAGTTCTTTTGGCAACTGAAGGACCAAGAAGGGAAACGGTGATGAGAGAGACTGCTCATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp ACACACATAAAGCAGAAGTGTGCCTTGCTTTATGCAACATACGTCTTCCATAGAAGCCACTCAAGCAGGTaGGGCTCAAAAGTTAAGACT +
Preference number: 4 (lower is better)
Translates to: THIKQKCALLYATYVFHRSHSSR*GSKVKT
Trigger: AGTCTTAACTTTTGAGCCTCACCTGCTTGAGTGGCT...TCTATGGAAGACGTATGTTGCATAAAGCAAGGCACACTTCTGCTTTATGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TATTGTCATTGCAGAGCATGGCTTCATCGATTGGTGAAAAATCGACGTGTTCATAGCCACTCAAGCAGGTaGGGCTCAAAAGTTAAGACT +
Preference number: 4 (lower is better)
Translates to: YCHCRAWLHRLVKNRRVHSHSSR*GSKVKT
Trigger: AGTCTTAACTTTTGAGCCTCACCTGCTTGAGTGGCT...ATGAACACGTCGATTTTTCACCAATCGATGAAGCCATGCTCTGCAATGACAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp AAAGAACTTGTCACAAGTTTGGGACATCAGGTTATGATAAAGATAGACACTAGACTCTTGAGAGCTGGCTaGGGTCCTGACTCGGTAAGA +
Preference number: 4 (lower is better)
Translates to: KELVTSLGHQVMIKIDTRLLRAG*GPDSVR
Trigger: TCTTACCGAGTCAGGACCTCAGCCAGCTCTCAAGAG...TCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp ACCTACTGTGTAAATGTAGATTTTGGAGGTTGCTCAAAAGGGATGCAGCCATTATGGATTCCAGGAAGTTaGCTGGCTCTGTATTGTTCC +
Preference number: 4 (lower is better)
Translates to: TYCVNVDFGGCSKGMQPLWIPGS*LALYCS
Trigger: GGAACAATACAGAGCCAGTCAACTTCCTGGAATCCA...TAATGGCTGCATCCCTTTTGAGCAACCTCCAAAATCTACATTTACACAGTAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp ACACACATAAAGCAGAAGTGTGCCTTGCTTTATGCAACATACGTCTTCCATAGAGTTGCTCAAAAGGGATaGAGCCATTATAGGGCACGT +
Preference number: 4 (lower is better)
Translates to: THIKQKCALLYATYVFHRVAQKG*SHYRAR
Trigger: ACGTGCCCTATAATGGCTGCATCCCTTTTGAGCAAC...TCTATGGAAGACGTATGTTGCATAAAGCAAGGCACACTTCTGCTTTATGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATTCATTACACTCGCCATaGAGTATTCAACTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: SRTKSTSLSIRSLGLASHSLHSP*SIQLPV
Trigger: CACAGGGAGTTGAATACTGCATGGCGAGTGTAATGA...ATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGTCACCAAATGGCAAGTaGATTACTAACCACACAGTG +
Preference number: 4 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKSPNGK*ITNHTV
Trigger: CACTGTGTGGTTAGTAATGCACTTGCCATTTGGTGA...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGTGTCATTGCAGAGCATaGCTTCATCGATTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKCHCRA*LHRLVK
Trigger: TTTCACCAATCGATGAAGCCATGCTCTGCAATGACA...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTTGCAGCCAGGCTTCCTaGAGATTCTACACGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPCSQAS*RFYTPG
Trigger: ACCTGGCGTGTAGAATCTCCAGGAAGCCTGGCTGCA...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 72 bp TCATCTCAACACCAGGAAGTGCATCTAACCAGGGATTaGCCAACACATTTGTTAGTCTGTAAACAACACCTG +
Preference number: 4 (lower is better)
Translates to: SSQHQEVHLTRD*PTHLLVCKQHL
Trigger: CAGGTGTTGTTTACAGACTAACAAATGTGTTGGCAAATCCCTGGTTAGATGCACTTCCTGGTGTTGAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTACAGTTATGTCACGGTaGCCACGGTCCCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPTVMSR*PRSQKY
Trigger: GTACTTCTGGGACCGTGGTCACCGTGACATAACTGT...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp ACCTACTGTGTAAATGTAGATTTTGGAGGTTGCTCAAAAGGGATGCAGCCATTATCTGTAAACAACACCTaGATACAACAGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TYCVNVDFGGCSKGMQPLSVNNT*IQQESC
Trigger: GCAGCTCTCCTGTTGTATTCAGGTGTTGTTTACAGA...TAATGGCTGCATCCCTTTTGAGCAACCTCCAAAATCTACATTTACACAGTAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp ACACACATAAAGCAGAAGTGTGCCTTGCTTTATGCAACATACGTCTTCCATAGAGTAGATTTTGGAGGTTaGTCAAAAGGGATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: THIKQKCALLYATYVFHRVDFGG*SKGMQP
Trigger: TGGCTGCATCCCTTTTGAGCAACCTCCAAAATCTAC...TCTATGGAAGACGTATGTTGCATAAAGCAAGGCACACTTCTGCTTTATGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TATTGTCATTGCAGAGCATGGCTTCATCGATTGGTGAAAAATCGACGTGTTCATGTAGATTTTGGAGGTTaGTCAAAAGGGATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: YCHCRAWLHRLVKNRRVHVDFGG*SKGMQP
Trigger: TGGCTGCATCCCTTTTGAGCAACCTCCAAAATCTAC...ATGAACACGTCGATTTTTCACCAATCGATGAAGCCATGCTCTGCAATGACAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATAGCAGAAGTGTGCCTTaGTTTATGCAACATACGTCT +
Preference number: 4 (lower is better)
Translates to: SRTKSTSLSIRSLGLASHSRSVP*FMQHTS
Trigger: AGACGTATGTTGCATAAAGCAAGGCACACTTCTGCT...ATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AAAGAACTTGTCACAAGTTTGGGACATCAGGTTATGATAAAGATAGACACTAGAGTATTCAACTCCCTGTaGCACTCAGAGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: KELVTSLGHQVMIKIDTRVFNSL*HSEGGR
Trigger: TCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATAC...TCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATTGTCATTGCAGAGCATaGCTTCATCGATTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: SRTKSTSLSIRSLGLASHCHCRA*LHRLVK
Trigger: TTTCACCAATCGATGAAGCCATGCTCTGCAATGACA...ATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp GCTTCATCGATTGGTGAAAAATCGACGTGTTCATCTCAACACCAGGAAGTGCATAGTGCCTTCCAACTCTaGTTCTTTCATTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: ASSIGEKSTCSSQHQEVHSAFQL*FFHFPD
Trigger: ATCTGGAAAATGAAAGAACCAGAGTTGGAAGGCACT...ATGCACTTCCTGGTGTTGAGATGAACACGTCGATTTTTCACCAATCGATGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TATTGTCATTGCAGAGCATGGCTTCATCGATTGGTGAAAAATCGACGTGTTCATGGGAAAATATCCAAATaGCTCTGTCTCCAAATGGGG +
Preference number: 4 (lower is better)
Translates to: YCHCRAWLHRLVKNRRVHGKISK*LCLQMG
Trigger: CCCCATTTGGAGACAGAGCCATTTGGATATTTTCCC...ATGAACACGTCGATTTTTCACCAATCGATGAAGCCATGCTCTGCAATGACAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 72 bp CAGGAAGTGCATCTAACCAGGGATTTGCCAACACATTaGTTAGTCTGTAAACAACACCTGAATACAACAGGA +
Preference number: 4 (lower is better)
Translates to: QEVHLTRDLPTH*LVCKQHLNTTG
Trigger: TCCTGTTGTATTCAGGTGTTGTTTACAGACTAACAAATGTGTTGGCAAATCCCTGGTTAGATGCACTTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AAAGAACTTGTCACAAGTTTGGGACATCAGGTTATGATAAAGATAGACACTAGATGGTGGCCAGTCAAGTaGCTTCCAACTCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: KELVTSLGHQVMIKIDTRWWPVK*LPTLVL
Trigger: AAGAACCAGAGTTGGAAGGCACTTGACTGGCCACCA...TCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TTGCTCAAAAGGGATGCAGCCATTATAGGGCACGTTATAGTGAGAATGCAGTGTAAGCATACTTTAGGCTaGACTAAAGTAAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: LLKRDAAIIGHVIVRMQCKHTLG*TKVRST
Trigger: AGTACTCCTTACTTTAGTGCAGCCTAAAGTATGCTT...ACACTGCATTCTCACTATAACGTGCCCTATAATGGCTGCATCCCTTTTGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTATGTCTTCTCTGGGCTaGGGAAGTGATGGGATTAGG +
Preference number: 4 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPMSSLG*GSDGIR
Trigger: CCTAATCCCATCACTTCCCCAGCCCAGAGAAGACAT...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTGGTATCAGACAGGGTTaGAATGTCTTCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPGIRQG*NVFSGL
Trigger: CAGCCCAGAGAAGACATTCCAACCCTGTCTGATACC...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTAAAAACAGTGGGGAGTaGCATCACTCAATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPKNSGE*HHSMPG
Trigger: CCCTGGCATTGAGTGATGCCACTCCCCACTGTTTTT...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR TCA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTAGCTTTTGCAGGAAGTaGCTCTCTCTGACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPSFCRK*LSLTLA
Trigger: TGCCAAAGTCAGAGAGAGTCACTTCCTGCAAAAGCT...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTGCGTTCTCTGATGATTaGCATCCACTTCTCAGACTC +
Preference number: 4 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPAFSDD*HPLLRL
Trigger: GAGTCTGAGAAGTGGATGGCAATCATCAGAGAACGC...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 72 bp ATCCCCATACACACACACATAAAGCAGAAGTGTGCCTaGCTTTATGCAACATACGTCTTCCATAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: IPIHTHIKQKCA*LYATYVFHREN
Trigger: ATTTTCTCTATGGAAGACGTATGTTGCATAAAGCAAGGCACACTTCTGCTTTATGTGTGTGTGTATGGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp AGTTTATCAGGCTGCAGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTATGTTTCTCCTGCAGATaGAATGAAACCTTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: SLSGCSRTKSTSLSIRSLCFSCR*NETFQK
Trigger: TTTTTGGAAGGTTTCATTCCATCTGCAGGAGAAACA...TAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCTGCAGCCTGATAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TATTGTCATTGCAGAGCATGGCTTCATCGATTGGTGAAAAATCGACGTGTTCATTGTTTCTCCTGCAGATaGAATGAAACCTTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: YCHCRAWLHRLVKNRRVHCFSCR*NETFQK
Trigger: TTTTTGGAAGGTTTCATTCCATCTGCAGGAGAAACA...ATGAACACGTCGATTTTTCACCAATCGATGAAGCCATGCTCTGCAATGACAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
3UTR CAA 72 bp TTGGTCCTTCAGTTGCCAAAAGAACTTGTCACAAGTTaGGGACATCAGGTTATGATAAAGATAGACACTAGA +
Preference number: 4 (lower is better)
Translates to: LVLQLPKELVTS*GHQVMIKIDTR
Trigger: TCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTTTGGCAACTGAAGGACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR GCA 90 bp AGTTTATCAGGCTGCAGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTATTGGGACCAAGTAATTaGAAACAATTATACACACCA +
Preference number: 4 (lower is better)
Translates to: SLSGCSRTKSTSLSIRSLLGPSN*KQLYTP
Trigger: TGGTGTGTATAATTGTTTGCAATTACTTGGTCCCAA...TAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCTGCAGCCTGATAAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CCA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTGTCAGTATGGTACAGTaGTGTAAATCACCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPVSMVQ*CKSPKR
Trigger: CCTTTTTGGTGATTTACACCACTGTACCATACTGAC...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS GCA 90 bp CCCATTGTGGAGCCGCTGGAGGAGGGAGGCTCCTCGGGACTGAGCTaGCCTGTGACAGGAGCCATGGGCACCGGGAGGCTCACGGTGGAC +
Preference number: 5 (lower is better)
Translates to: PIVEPLEEGGSSGLS*PVTGAMGTGRLTVD
Trigger: GTCCACCGTGAGCCTCCCGGTGCCCATGGCTCCTGTCACAGGGCAGCTCAGTCCCGAGGAGCCTCCCTCCTCCAGCGGCTCCACAATGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS CCA 90 bp CCCGGTCTCCACAGTGCCATGGGGGTTCCGGTGCAGGTGGAGGGCTaGGCACCCTCGGAGGAGAGGCATTCCCATTGTGGAGCCGCTGGA +
Preference number: 5 (lower is better)
Translates to: PGLHSAMGVPVQVEG*APSEERHSHCGAAG
Trigger: TCCAGCGGCTCCACAATGGGAATGCCTCTCCTCCGAGGGTGCCCAGCCCTCCACCTGCACCGGAACCCCCATGGCACTGTGGAGACCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS GCA 90 bp AAGGCTGAGCTCCGCCCCTCCCAAGAAGCCAGTGCTCCTGGCCCCTaGCCACTAGACGCCTCCTGCACCAGACTCAGCAGCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: KAELRPSQEASAPGP*PLDASCTRLSSSSW
Trigger: CCAGGAGGAGCTGCTGAGTCTGGTGCAGGAGGCGTCTAGTGGGCAGGGGCCAGGAGCACTGGCTTCTTGGGAGGGGCGGAGCTCAGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS CCA 90 bp GTCAGGCCACTGATCATCAGTGAGCCTGGCGCCCTGGGCACCAGATaGGCTGACGTGCTCCAGGCCAGGCAGTCAAGGAAGAAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: VRPLIISEPGALGTR*ADVLQARQSRKKPW
Trigger: CCAGGGCTTCTTCCTTGACTGCCTGGCCTGGAGCACGTCAGCCCATCTGGTGCCCAGGGCGCCAGGCTCACTGATGATCAGTGGCCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556510.1
ENST00000556842.5
CDS CCA 90 bp CCCTGCCCACTAGACGCCTCCTGCACCAGACTCAGCAGCTCCTCCTaGACAGCCAGGGGCAACTGCAACAGAGCCTCTCTATGGGCATCC +
Preference number: 5 (lower is better)
Translates to: PCPLDASCTRLSSSS*TARGNCNRASLWAS
Trigger: GGATGCCCATAGAGAGGCTCTGTTGCAGTTGCCCCTGGCTGTCCAGGAGGAGCTGCTGAGTCTGGTGCAGGAGGCGTCTAGTGGGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCAGGAGAGGCATTCCCATaGTGGAGCCGCTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPGEAFP*WSRWRR
Trigger: CCTCCTCCAGCGGCTCCACAATGGGAATGCCTCTCC...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGGGCGCCTCGTTTCCATaGAGGCCCCCGACCCCGTGC +
Preference number: 5 (lower is better)
Translates to: LWIRVSSRGTLTERAELEGASFP*RPPTPC
Trigger: GCACGGGGTCGGGGGCCTCAATGGAAACGAGGCGCC...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS GCA 90 bp GGAAGGACGCTCACCCCCACGCTGAAGATGCGCTCCACATGGGGCTaGTGTTCCCGAACCTTGTTCTCAGCCTCCGCAGACACCGCAAAG +
Preference number: 5 (lower is better)
Translates to: GRTLTPTLKMRSTWG*CSRTLFSASADTAK
Trigger: CTTTGCGGTGTCTGCGGAGGCTGAGAACAAGGTTCGGGAACAGCAGCCCCATGTGGAGCGCATCTTCAGCGTGGGGGTGAGCGTCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556510.1
ENST00000556842.5
CDS CCA 90 bp TCCTTCGGAAGGACGCTCACCCCCACGCTGAAGATGCGCTCCACATaGGGCTGCTGTTCCCGAACCTTGTTCTCAGCCTCCGCAGACACC +
Preference number: 5 (lower is better)
Translates to: SFGRTLTPTLKMRST*GCCSRTLFSASADT
Trigger: GGTGTCTGCGGAGGCTGAGAACAAGGTTCGGGAACAGCAGCCCCATGTGGAGCGCATCTTCAGCGTGGGGGTGAGCGTCCTTCCGAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556510.1
ENST00000556842.5
CDS CCA 90 bp TGCAGAGGCCCTTCAGGTACTCCTTGGCTCTGCTGGCGTTTTCCTTaGGGCCCTCCAGCTGCAGCCAGATGTGGGGGTTGTCCGGACAGT +
Preference number: 5 (lower is better)
Translates to: CRGPSGTPWLCWRFP*GPPAAARCGGCPDS
Trigger: ACTGTCCGGACAACCCCCACATCTGGCTGCAGCTGGAGGGCCCCAAGGAAAACGCCAGCAGAGCCAAGGAGTACCTGAAGGGCCTCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556510.1
ENST00000556842.5
CDS-3UTR CAA 90 bp TCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCACGTAAGTGTCTCCCCTaGCTCCCCTGCAATCTCCGG +
Preference number: 5 (lower is better)
Translates to: SSLSPALWCKLSLGDSVPRKCLP*LPCNLR
Trigger: CCGGAGATTGCAGGGGAGCAAGGGGAGACACTTACG...TGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGGGGAGAGGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACGGAGAGGCATTCCCATaGTGGAGCCGCTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNGEAFP*WSRWRR
Trigger: CCTCCTCCAGCGGCTCCACAATGGGAATGCCTCTCC...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGGCCATGCCCTGCTGCTaGTCTCCCCTGTCCCCCACG +
Preference number: 5 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRAMPCC*SPLSPT
Trigger: CGTGGGGGACAGGGGAGACAAGCAGCAGGGCATGGC...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp CAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGTGCCAGTCACCAAGTaGCCCCCTCGGGCGCCTCGT +
Preference number: 5 (lower is better)
Translates to: QSPELIPSSSPHSLQKPCVPVTK*PPRAPR
Trigger: ACGAGGCGCCCGAGGGGGCAACTTGGTGACTGGCAC...ACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGGTGCCAGTCACCAAGTaGCCCCCTCGGGCGCCTCGT +
Preference number: 5 (lower is better)
Translates to: LWIRVSSRGTLTERAELEVPVTK*PPRAPR
Trigger: ACGAGGCGCCCGAGGGGGCAACTTGGTGACTGGCAC...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGGAGTTTGCCCAGACCTaGGGTGCTGCCCTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILEFAQT*GAALGR
Trigger: GCGGCCCAGGGCAGCACCCAAGGTCTGGGCAAACTC...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS TCA 90 bp TCAGCACTCCAGTACACTGAGAGGCTCCGGAAGATGGTCCTGGCGTaGAGTCCCAGCTCAGCCGCTCTGCCAGCTCTTCTACCCGGCTCT +
Preference number: 5 (lower is better)
Translates to: SALQYTERLRKMVLA*SPSSAALPALLPGS
Trigger: AGAGCCGGGTAGAAGAGCTGGCAGAGCGGCTGAGCTGGGACTTCACGCCAGGACCATCTTCCGGAGCCTCTCAGTGTACTGGAGTGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS TCA 90 bp GGGGACTGCAGCAGGGCAGAGAAGTCTCTCAGCACTCCAGTACACTaGGAGGCTCCGGAAGATGGTCCTGGCGTGAAGTCCCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: GDCSRAEKSLSTPVH*EAPEDGPGVKSQLS
Trigger: GCTGAGCTGGGACTTCACGCCAGGACCATCTTCCGGAGCCTCTCAGTGTACTGGAGTGCTGAGAGACTTCTCTGCCCTGCTGCAGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS GCA 90 bp GGCTCCGGAAGATGGTCCTGGCGTGAAGTCCCAGCTCAGCCGCTCTaGCAGCTCTTCTACCCGGCTCTGAGCCATGACAAAGGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: GSGRWSWREVPAQPL*QLFYPALSHDKGFS
Trigger: ACTGAAGCCTTTGTCATGGCTCAGAGCCGGGTAGAAGAGCTGGCAGAGCGGCTGAGCTGGGACTTCACGCCAGGACCATCTTCCGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS CCA 90 bp GTCTCTCAGCACTCCAGTACACTGAGAGGCTCCGGAAGATGGTCCTaGCGTGAAGTCCCAGCTCAGCCGCTCTGCCAGCTCTTCTACCCG +
Preference number: 5 (lower is better)
Translates to: VSQHSSTLRGSGRWS*REVPAQPLCQLFYP
Trigger: CGGGTAGAAGAGCTGGCAGAGCGGCTGAGCTGGGACTTCACGCCAGGACCATCTTCCGGAGCCTCTCAGTGTACTGGAGTGCTGAGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS CCA 90 bp TGGAGGCCATGCACCATGGCCACGTTGCTGCCGTCAATGACAATATaGCGGAGGTCTGGCTGGCCAGGCACATTGGCAAGGCACAGGGTG +
Preference number: 5 (lower is better)
Translates to: WRPCTMATLLPSMTI*RRSGWPGTLARHRV
Trigger: CACCCTGTGCCTTGCCAATGTGCCTGGCCAGCCAGACCTCCGCCATATTGTCATTGACGGCAGCAACGTGGCCATGGTGCATGGCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS CCA 90 bp GACCACGGTCCCAGAAGTACTGCACAGCAATGGCAATGCCCCGGCTaGAGAAGTAGTGCTGGAGGCCATGCACCATGGCCACGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: DHGPRSTAQQWQCPG*RSSAGGHAPWPRCC
Trigger: GCAGCAACGTGGCCATGGTGCATGGCCTCCAGCACTACTTCTCCAGCCGGGGCATTGCCATTGCTGTGCAGTACTTCTGGGACCGTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGCCATGCCCTGCTGCTaGTCTCCCCTGTCCCCCACG +
Preference number: 5 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRAMPCC*SPLSPT
Trigger: CGTGGGGGACAGGGGAGACAAGCAGCAGGGCATGGC...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGGGCGCCTCGTTTCCATaGAGGCCCCCGACCCCGTGC +
Preference number: 5 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVGASFP*RPPTPC
Trigger: GCACGGGGTCGGGGGCCTCAATGGAAACGAGGCGCC...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTCCTGCAGGGCCTCCTaGAAACGCTGTGTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNSCRAS*KRCVPV
Trigger: GACTGGCACACAGCGTTTCAAGGAGGCCCTGCAGGA...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp CCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAGAGTTTGCCCAGACCTaGGGTGCTGCCCTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: PSSSPHSLQKPCAKAKLREFAQT*GAALGR
Trigger: GCGGCCCAGGGCAGCACCCAAGGTCTGGGCAAACTC...TCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS TCA 90 bp AGTAGTGCTGGAGGCCATGCACCATGGCCACGTTGCTGCCGTCAATaGCAATATGGCGGAGGTCTGGCTGGCCAGGCACATTGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: SSAGGHAPWPRCCRQ*QYGGGLAGQAHWQG
Trigger: GCCTTGCCAATGTGCCTGGCCAGCCAGACCTCCGCCATATTGTCATTGACGGCAGCAACGTGGCCATGGTGCATGGCCTCCAGCACTACT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS GCA 90 bp TCTGGCTGGCCAGGCACATTGGCAAGGCACAGGGTGAAAGGATCCTaGAGGGCCTCCTTGAAACGCTGTGTGCCAGTCACCAAGTTGCCC +
Preference number: 5 (lower is better)
Translates to: SGWPGTLARHRVKGS*RASLKRCVPVTKLP
Trigger: GGGCAACTTGGTGACTGGCACACAGCGTTTCAAGGAGGCCCTGCAGGATCCTTTCACCCTGTGCCTTGCCAATGTGCCTGGCCAGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS GCA 90 bp TGTCACGGTGACCACGGTCCCAGAAGTACTGCACAGCAATGGCAATaGCCCGGCTGGAGAAGTAGTGCTGGAGGCCATGCACCATGGCCA +
Preference number: 5 (lower is better)
Translates to: CHGDHGPRSTAQQWQ*PGWRSSAGGHAPWP
Trigger: TGGCCATGGTGCATGGCCTCCAGCACTACTTCTCCAGCCGGGGCATTGCCATTGCTGTGCAGTACTTCTGGGACCGTGGTCACCGTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTGCTGTTCCCGAACCTaGTTCTCAGCCTCCGCAGAC +
Preference number: 5 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNCCSRT*FSASAD
Trigger: GTCTGCGGAGGCTGAGAACAAGGTTCGGGAACAGCA...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp GCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCGGAGAGGCATTCCCATaGTGGAGCCGCTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: AWRWSQQSQSPELIPSSSGEAFP*WSRWRR
Trigger: CCTCCTCCAGCGGCTCCACAATGGGAATGCCTCTCC...GCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp AGGTGGTGGTGCGCTCAGGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATCCTGCAGGGCCTCCTaGAAACGCTGTGTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: RWWCAQVRNGPGYQTGLESCRAS*KRCVPV
Trigger: GACTGGCACACAGCGTTTCAAGGAGGCCCTGCAGGA...TTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGGGGCAGAAGACACTTTaGGTCTACTGCACACCCACC +
Preference number: 5 (lower is better)
Translates to: RCGASCLWATACHHAAGGGQKTL*VYCTPT
Trigger: GGTGGGTGTGCAGTAGACCAAAAGTGTCTTCTGCCC...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS CCA 90 bp AGAGAAGTCTCTCAGCACTCCAGTACACTGAGAGGCTCCGGAAGATaGTCCTGGCGTGAAGTCCCAGCTCAGCCGCTCTGCCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: REVSQHSSTLRGSGR*SWREVPAQPLCQLF
Trigger: GAAGAGCTGGCAGAGCGGCTGAGCTGGGACTTCACGCCAGGACCATCTTCCGGAGCCTCTCAGTGTACTGGAGTGCTGAGAGACTTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS CCA 90 bp ATGGCCACGTTGCTGCCGTCAATGACAATATGGCGGAGGTCTGGCTaGCCAGGCACATTGGCAAGGCACAGGGTGAAAGGATCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: MATLLPSMTIWRRSG*PGTLARHRVKGSCR
Trigger: CCTGCAGGATCCTTTCACCCTGTGCCTTGCCAATGTGCCTGGCCAGCCAGACCTCCGCCATATTGTCATTGACGGCAGCAACGTGGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS CCA 90 bp CACCATGGCCACGTTGCTGCCGTCAATGACAATATGGCGGAGGTCTaGCTGGCCAGGCACATTGGCAAGGCACAGGGTGAAAGGATCCTG +
Preference number: 5 (lower is better)
Translates to: HHGHVAAVNDNMAEV*LARHIGKAQGERIL
Trigger: CAGGATCCTTTCACCCTGTGCCTTGCCAATGTGCCTGGCCAGCCAGACCTCCGCCATATTGTCATTGACGGCAGCAACGTGGCCATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp CTGAGCTGGAGGCGGCTGGAGCTGACAGGGCGGCAGCCACTCAAGCAGGTGAGGTTGGATTCCAGGAAGTaGACTGGCTCTGTATTGTTC +
Preference number: 5 (lower is better)
Translates to: LSWRRLELTGRQPLKQVRLDSRK*TGSVLF
Trigger: GAACAATACAGAGCCAGTCAACTTCCTGGAATCCAA...CCTCACCTGCTTGAGTGGCTGCCGCCCTGTCAGCTCCAGCCGCCTCCAGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS TCA 90 bp GTGAAGTCCCAGCTCAGCCGCTCTGCCAGCTCTTCTACCCGGCTCTaGGCCATGACAAAGGCTTCAGTCAGGCCACTGATCATCAGTGAG +
Preference number: 5 (lower is better)
Translates to: VKSQLSRSASSSTRL*AMTKASVRPLIISE
Trigger: CTCACTGATGATCAGTGGCCTGACTGAAGCCTTTGTCATGGCTCAGAGCCGGGTAGAAGAGCTGGCAGAGCGGCTGAGCTGGGACTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS CCA 90 bp CAGTTATGTCACGGTGACCACGGTCCCAGAAGTACTGCACAGCAATaGCAATGCCCCGGCTGGAGAAGTAGTGCTGGAGGCCATGCACCA +
Preference number: 5 (lower is better)
Translates to: QLCHGDHGPRSTAQQ*QCPGWRSSAGGHAP
Trigger: TGGTGCATGGCCTCCAGCACTACTTCTCCAGCCGGGGCATTGCCATTGCTGTGCAGTACTTCTGGGACCGTGGTCACCGTGACATAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCTGCTGTTCCCGAACCTaGTTCTCAGCCTCCGCAGAC +
Preference number: 5 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSCCSRT*FSASAD
Trigger: GTCTGCGGAGGCTGAGAACAAGGTTCGGGAACAGCA...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGCCAGATGTGGGGGTaGTCCGGACAGTCCTTCGGA +
Preference number: 5 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQSQMWG*SGQSFG
Trigger: TCCGAAGGACTGTCCGGACAACCCCCACATCTGGCT...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp CAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAACGTAAGTGTCTCCCCTaGCTCCCCTGCAATCTCCGG +
Preference number: 5 (lower is better)
Translates to: QSQSPELIPSSSPHSLQKRKCLP*LPCNLR
Trigger: CCGGAGATTGCAGGGGAGCAAGGGGAGACACTTACG...TTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCGCCTCAGACAGTTGGTaGATGTCCCGGCAGTATGGC +
Preference number: 5 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSASDSW*MSRQYG
Trigger: GCCATACTGCCGGGACATCAACCAACTGTCTGAGGC...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CAA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACGGGTATCAGACAGGGTaGGAATGTCTTCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNGYQTG*ECLLWA
Trigger: AGCCCAGAGAAGACATTCCAACCCTGTCTGATACCC...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS CCA 90 bp AAGACTGAGCAGGGCCTCAGACAGTTGGTTGATGTCCCGGCAGTATaGCTCCCGCTGCAGGATGAAGTCCACTTTGTGATCCTGACCCCA +
Preference number: 5 (lower is better)
Translates to: KTEQGLRQLVDVPAV*LPLQDEVHFVILTP
Trigger: TGGGGTCAGGATCACAAAGTGGACTTCATCCTGCAGCGGGAGCCATACTGCCGGGACATCAACCAACTGTCTGAGGCCCTGCTCAGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556255.1
ENST00000556842.5
CDS CCA 90 bp GCAGGTGAGGCTCAAAAGTTAAGACTGAGCAGGGCCTCAGACAGTTaGTTGATGTCCCGGCAGTATGGCTCCCGCTGCAGGATGAAGTCC +
Preference number: 5 (lower is better)
Translates to: AGEAQKLRLSRASDS*LMSRQYGSRCRMKS
Trigger: GGACTTCATCCTGCAGCGGGAGCCATACTGCCGGGACATCAACCAACTGTCTGAGGCCCTGCTCAGTCTTAACTTTTGAGCCTCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556255.1
ENST00000556842.5
CDS CCA 90 bp CTCTCCGGAGAGGAAGTCCCGGTAAACAAGGCTGTCTATCGAGAGTaGGCGTCTGGGCTTTGGAAAAGGATGACCACAGTCCGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: LSGEEVPVNKAVYRE*ASGLWKRMTTVRSK
Trigger: CTTGCTCCGGACTGTGGTCATCCTTTTCCAAAGCCCAGACGCCCACTCTCGATAGACAGCCTTGTTTACCGGGACTTCCTCTCCGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556510.1
CDS-3UTR CAA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCCCTTCAGGTACTCCTaGGCTCTGCTGGCGTTTTCC +
Preference number: 5 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSEPFRYS*ALLAFS
Trigger: GGAAAACGCCAGCAGAGCCAAGGAGTACCTGAAGGG...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGGGCTGGCCAGGCACATaGGCAAGGCACAGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVGWPGT*ARHRVK
Trigger: TTTCACCCTGTGCCTTGCCAATGTGCCTGGCCAGCC...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGACAGGGCCTCAGACAGTaGGTTGATGTCCCGGCAGTA +
Preference number: 5 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRQGLRQ*VDVPAV
Trigger: TACTGCCGGGACATCAACCAACTGTCTGAGGCCCTG...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CAA 90 bp CAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAACAGGGCCTCAGACAGTaGGTTGATGTCCCGGCAGTA +
Preference number: 5 (lower is better)
Translates to: QSQSPELIPSSSPHSLQKQGLRQ*VDVPAV
Trigger: TACTGCCGGGACATCAACCAACTGTCTGAGGCCCTG...TTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp GTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCGGGCAGAAGACACTTTaGGTCTACTGCACACCCACC +
Preference number: 5 (lower is better)
Translates to: VASLIQSTNSGCLWIRVSGQKTL*VYCTPT
Trigger: GGTGGGTGTGCAGTAGACCAAAAGTGTCTTCTGCCC...GCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGATGGTGCAAGCTGTCTTaGGGCGACAGCGTGCCATCA +
Preference number: 5 (lower is better)
Translates to: PSSSPHSLQKPCAKAKLRWCKLS*GDSVPS
Trigger: TGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCA...TCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS TCA 90 bp CATAGGCCACTTCTGGTGATGGAGATCTGGCCCCCTACCTCACCTTaGCCCAGCTACAGGCAACTGACTAGATGCAAGTGCCATGGCCTA +
Preference number: 5 (lower is better)
Translates to: HRPLLVMEIWPPTSP*PSYRQLTRCKCHGL
Trigger: TAGGCCATGGCACTTGCATCTAGTCAGTTGCCTGTAGCTGGGTCAAGGTGAGGTAGGGGGCCAGATCTCCATCACCAGAAGTGGCCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556255.1
CDS CCA 90 bp AGAGGAAGTCCCGGTAAACAAGGCTGTCTATCGAGAGTGGGCGTCTaGGCTTTGGAAAAGGATGACCACAGTCCGGAGCAAGAAGGGTGG +
Preference number: 5 (lower is better)
Translates to: RGSPGKQGCLSRVGV*ALEKDDHSPEQEGW
Trigger: CCACCCTTCTTGCTCCGGACTGTGGTCATCCTTTTCCAAAGCCCAGACGCCCACTCTCGATAGACAGCCTTGTTTACCGGGACTTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556510.1
CDS-3UTR CAA 90 bp CACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGGGAGCTCTCACTCCTaGGCACTGAGCACCCAGCAA +
Preference number: 5 (lower is better)
Translates to: HFMDLSQSGFPDPKHQLRGSSHS*ALSTQQ
Trigger: TTGCTGGGTGCTCAGTGCCAAGGAGTGAGAGCTCCC...CCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp TTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGGGGAGCTCTCACTCCTaGGCACTGAGCACCCAGCAA +
Preference number: 5 (lower is better)
Translates to: FMDLSQSGFPDPKHQLRVGSSHS*ALSTQQ
Trigger: TTGCTGGGTGCTCAGTGCCAAGGAGTGAGAGCTCCC...CACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp CACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGTCCTGCAGGGCCTCCTaGAAACGCTGTGTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: HFMDLSQSGFPDPKHQLRSCRAS*KRCVPV
Trigger: GACTGGCACACAGCGTTTCAAGGAGGCCCTGCAGGA...CCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp CTCTGGATCAGAGTGAGCAGCAGAGGGACTCTCACAGAAAGGGCTGAGCTGGAGTGCACCATGGCCACGTaGCTGCCGTCAATGACAATA +
Preference number: 5 (lower is better)
Translates to: LWIRVSSRGTLTERAELECTMAT*LPSMTI
Trigger: TATTGTCATTGACGGCAGCAACGTGGCCATGGTGCA...CTCCAGCTCAGCCCTTTCTGTGAGAGTCCCTCTGCTGCTCACTCTGATCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGGCCTCAGACAGTTGGTaGATGTCCCGGCAGTATGGC +
Preference number: 5 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVASDSW*MSRQYG
Trigger: GCCATACTGCCGGGACATCAACCAACTGTCTGAGGC...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CAA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTGTAGATTTTGGAGGTaGCTCAAAAGGGATGCAGCC +
Preference number: 5 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNCRFWR*LKRDAA
Trigger: GGCTGCATCCCTTTTGAGCAACCTCCAAAATCTACA...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGCAGCGGGGACCTCTCTaGTCCACATCGCACGCAAAC +
Preference number: 5 (lower is better)
Translates to: HFMDLSQSGFPDPKHQLRQRGPL*STSHAN
Trigger: GTTTGCGTGCGATGTGGACAAGAGAGGTCCCCGCTG...CCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553935.6
ENST00000556842.5
CDS TCA 90 bp AACAGGTCGCACCTAGTTAAGGCTCTGGTAAACAGCCCCAGGAGGTaGCAAGCATCTGAGTCCACTGGAGGTAGGGAGGGTGTATGTCAC +
Preference number: 5 (lower is better)
Translates to: NRSHLVKALVNSPRR*QASESTGGREGVCH
Trigger: GTGACATACACCCTCCCTACCTCCAGTGGACTCAGATGCTTGTCACCTCCTGGGGCTGTTTACCAGAGCCTTAACTAGGTGCGACCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556510.1
CDS-3UTR CAA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCGGGAGCTCTCACTCCTaGGCACTGAGCACCCAGCAA +
Preference number: 5 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLGSSHS*ALSTQQ
Trigger: TTGCTGGGTGCTCAGTGCCAAGGAGTGAGAGCTCCC...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGGCCATGCCCTGCTGCTaGTCTCCCCTGTCCCCCACG +
Preference number: 5 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKAMPCC*SPLSPT
Trigger: CGTGGGGGACAGGGGAGACAAGCAGCAGGGCATGGC...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGGTGCCAGTCACCAAGTaGCCCCCTCGGGCGCCTCGT +
Preference number: 5 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKVPVTK*PPRAPR
Trigger: ACGAGGCGCCCGAGGGGGCAACTTGGTGACTGGCAC...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGCAGGGCCTCAGACAGTaGGTTGATGTCCCGGCAGTA +
Preference number: 5 (lower is better)
Translates to: HFMDLSQSGFPDPKHQLRQGLRQ*VDVPAV
Trigger: TACTGCCGGGACATCAACCAACTGTCTGAGGCCCTG...CCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS TCA 90 bp GAACCTGTCATCATAGGAGGAGATCCTCTTGCCATCCATGACTCGTaGGGGTGTGAGGGAGAGCAGGCTGAGGGAATACAGCTTTTGCAG +
Preference number: 5 (lower is better)
Translates to: EPVIIGGDPLAIHDS*GCEGEQAEGIQLLQ
Trigger: CTGCAAAAGCTGTATTCCCTCAGCCTGCTCTCCCTCACACCCTCACGAGTCATGGATGGCAAGAGGATCTCCTCCTATGATGACAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS TCA 90 bp CCCTGCTGCTGTTTACCATGTTCTGCAAAGCCCCTGGAAGGATGCTaGGCCTTAGAAGACCCCTGTGTCCTGGCTGGCTTCTTCAGAAAT +
Preference number: 5 (lower is better)
Translates to: PCCCLPCSAKPLEGC*ALEDPCVLAGFFRN
Trigger: ATTTCTGAAGAAGCCAGCCAGGACACAGGGGTCTTCTAAGGCTCAGCATCCTTCCAGGGGCTTTGCAGAACATGGTAAACAGCAGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556255.1
ENST00000556842.5
CDS TCA 90 bp CTGTCTGTCATCATAGGAGGAGATCCTCTTGCCATCCATGACTCGTaGGGGTGTGAGGGAGAGCAGGCTGAGGGAATACAGCTTTTGCAG +
Preference number: 5 (lower is better)
Translates to: LSVIIGGDPLAIHDS*GCEGEQAEGIQLLQ
Trigger: CTGCAAAAGCTGTATTCCCTCAGCCTGCTCTCCCTCACACCCTCACGAGTCATGGATGGCAAGAGGATCTCCTCCTATGATGACAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554268.1
CDS-3UTR CAA 90 bp ACACACATAAAGCAGAAGTGTGCCTTGCTTTATGCAACATACGTCTTCCATAGAGGCGCCTCGTTTCCATaGAGGCCCCCGACCCCGTGC +
Preference number: 5 (lower is better)
Translates to: THIKQKCALLYATYVFHRGASFP*RPPTPC
Trigger: GCACGGGGTCGGGGGCCTCAATGGAAACGAGGCGCC...TCTATGGAAGACGTATGTTGCATAAAGCAAGGCACACTTCTGCTTTATGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGTCCCGGAACTGGTCATaGGAGACAATTATCCCATCT +
Preference number: 5 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWSRNWS*ETIIPS
Trigger: AGATGGGATAATTGTCTCCAATGACCAGTTCCGGGA...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGTCCCGGAACTGGTCATaGGAGACAATTATCCCATCT +
Preference number: 5 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRSRNWS*ETIIPS
Trigger: AGATGGGATAATTGTCTCCAATGACCAGTTCCGGGA...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CAA 90 bp AGAACAGAACCCAGGGGCACCTGTCCTACTTCTTTATCTGGTCTTGGATTCCAGGCCTCAGACAGTTGGTaGATGTCCCGGCAGTATGGC +
Preference number: 5 (lower is better)
Translates to: RTEPRGTCPTSLSGLGFQASDSW*MSRQYG
Trigger: GCCATACTGCCGGGACATCAACCAACTGTCTGAGGC...CTGGAATCCAAGACCAGATAAAGAAGTAGGACAGGTGCCCCTGGGTTCTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCCAGGGCCTCAGACAGTaGGTTGATGTCCCGGCAGTA +
Preference number: 5 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLQGLRQ*VDVPAV
Trigger: TACTGCCGGGACATCAACCAACTGTCTGAGGCCCTG...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp CGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGAACCCTGAGAGTATTTaGATAATGCAGTCATCCCTA +
Preference number: 5 (lower is better)
Translates to: RCGASCLWATACHHAAGGNPESI*IMQSSL
Trigger: TAGGGATGACTGCATTATCAAAATACTCTCAGGGTT...CCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCAGAAGTCAGGGCCTGATCATTGTCACCTCTTaGACCAGCCTGTCTCCAACA +
Preference number: 5 (lower is better)
Translates to: HAVFNSLCHSEGGRSQGLIIVTS*TSLSPT
Trigger: TGTTGGAGACAGGCTGGTCAAAGAGGTGACAATGAT...CAGGCCCTGACTTCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGATCATTGTCACCTCTTaGACCAGCCTGTCTCCAACA +
Preference number: 5 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRIIVTS*TSLSPT
Trigger: TGTTGGAGACAGGCTGGTCAAAGAGGTGACAATGAT...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CCCTCCACCCTAGCTCAGCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTTCTTGGTCCTTCAGTaGCCAAAAGAACTTGTCACA +
Preference number: 5 (lower is better)
Translates to: PSTLAQLGGGANSLSLRNFLVLQ*PKELVT
Trigger: TGTGACAAGTTCTTTTGGCAACTGAAGGACCAAGAA...GTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGCTGAGCTAGGGTGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGCAGTCCTCTTTCCCATaGTTCTGTTGCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWQSSFP*FCCSTL
Trigger: TAAGGTGGAGCAACAGAACAATGGGAAAGAGGACTG...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGTGCACCATGGCCACGTaGCTGCCGTCAATGACAATA +
Preference number: 5 (lower is better)
Translates to: HFMDLSQSGFPDPKHQLRCTMAT*LPSMTI
Trigger: TATTGTCATTGACGGCAGCAACGTGGCCATGGTGCA...CCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS-3UTR CAA 90 bp AGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGTCCCGGAACTGGTCATaGGAGACAATTATCCCATCT +
Preference number: 5 (lower is better)
Translates to: SGFPDPKHQLRVPLDQSESRNWS*ETIIPS
Trigger: AGATGGGATAATTGTCTCCAATGACCAGTTCCGGGA...CTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556842.5
CDS-3UTR CAA 90 bp CCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGGGCATGGCTTCATCGATaGGTGAAAAATCGACGTGTT +
Preference number: 5 (lower is better)
Translates to: PDPKHQLRVPLDQSEQQRAWLHR*VKNRRV
Trigger: AACACGTCGATTTTTCACCAATCGATGAAGCCATGC...CCTCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp GCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCAAGCAGAAGTGTGCCTaGCTTTATGCAACATACGTC +
Preference number: 5 (lower is better)
Translates to: AWRWSQQSQSPELIPSSSKQKCA*LYATYV
Trigger: GACGTATGTTGCATAAAGCAAGGCACACTTCTGCTT...GCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCCCCACTCCCTACAGAAATCACCGTTTCCCTTCTaGGTCCTTCAGTTGCCAAAA +
Preference number: 5 (lower is better)
Translates to: QSQSPELIPSSSPHSLQKSPFPF*VLQLPK
Trigger: TTTTGGCAACTGAAGGACCAAGAAGGGAAACGGTGA...TTTCTGTAGGGAGTGGGGGCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGCCCAAAGACGGGGTTTaGAAAGTTACAATGAGCAGT +
Preference number: 5 (lower is better)
Translates to: SGHQFFPWIHIGDLAGILPKDGV*KVTMSS
Trigger: ACTGCTCATTGTAACTTTCAAAACCCCGTCTTTGGG...CAGGATTCCTGCCAGGTCCCCGATGTGTATCCAGGGGAAGAATTGGTGGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp ATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGCCCAAAGACGGGGTTTaGAAAGTTACAATGAGCAGT +
Preference number: 5 (lower is better)
Translates to: IPQRTLATGYQYSFPELGPKDGV*KVTMSS
Trigger: ACTGCTCATTGTAACTTTCAAAACCCCGTCTTTGGG...CCCTAGCTCTGGGAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGCTGTGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp AGAACAGAACCCAGGGGCACCTGTCCTACTTCTTTATCTGGTCTTGGATTCCAGCCACTAATGCTGAGTTaGCCCAGACCTTGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: RTEPRGTCPTSLSGLGFQPLMLS*PRPWVL
Trigger: CAGCACCCAAGGTCTGGGCAAACTCAGCATTAGTGG...CTGGAATCCAAGACCAGATAAAGAAGTAGGACAGGTGCCCCTGGGTTCTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp GCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCAGTTCCTGGTCACCTTaGGGACCAAGTAATTGCAAA +
Preference number: 5 (lower is better)
Translates to: AWRWSQQSQSPELIPSSSSSWSP*GPSNCK
Trigger: TTTGCAATTACTTGGTCCCAAAGGTGACCAGGAACT...GCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp GCTTCATCGATTGGTGAAAAATCGACGTGTTCATCTCAACACCAGGAAGTGCATAGCCAGATGTGGGGGTaGTCCGGACAGTCCTTCGGA +
Preference number: 5 (lower is better)
Translates to: ASSIGEKSTCSSQHQEVHSQMWG*SGQSFG
Trigger: TCCGAAGGACTGTCCGGACAACCCCCACATCTGGCT...ATGCACTTCCTGGTGTTGAGATGAACACGTCGATTTTTCACCAATCGATGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp GCTTGGAGGTGGAGCCAACAGTCTCAGTCTCCGGAACTAATCCCCTCTAGCAGCCATCTAACCAGGGATTaGCCAACACATTTGTTAGTC +
Preference number: 5 (lower is better)
Translates to: AWRWSQQSQSPELIPSSSHLTRD*PTHLLV
Trigger: GACTAACAAATGTGTTGGCAAATCCCTGGTTAGATG...GCTGCTAGAGGGGATTAGTTCCGGAGACTGAGACTGTTGGCTCCACCTCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CCCTCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAGCATGGCTTCATCGATaGGTGAAAAATCGACGTGTT +
Preference number: 5 (lower is better)
Translates to: PSSSPHSLQKPCAKAKLRAWLHR*VKNRRV
Trigger: AACACGTCGATTTTTCACCAATCGATGAAGCCATGC...TCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCAGAAGTCAGGGCCTGCGGATCACATTAATATaGTCATTGCAGAGCATGGCT +
Preference number: 5 (lower is better)
Translates to: HAVFNSLCHSEGGRSQGLRITLI*SLQSMA
Trigger: AGCCATGCTCTGCAATGACAATATTAATGTGATCCG...CAGGCCCTGACTTCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCGGGTATCAGACAGGGTaGGAATGTCTTCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLGYQTG*ECLLWA
Trigger: AGCCCAGAGAAGACATTCCAACCCTGTCTGATACCC...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS CCA 90 bp ATGCAAGTGCCATGGCCTAGAGAGGAAACAAAGATGAATCCAAGGTaGTCTCCCAGTAGCATCCTATCTGCCAACCATAGTCCTTCACCC +
Preference number: 5 (lower is better)
Translates to: MQVPWPREETKMNPR*SPSSILSANHSPSP
Trigger: GGGTGAAGGACTATGGTTGGCAGATAGGATGCTACTGGGAGACCACCTTGGATTCATCTTTGTTTCCTCTCTAGGCCATGGCACTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556255.1
CDS-3UTR CAA 90 bp ACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATCTGACTGGCTGGCCAGGCACATaGGCAAGGCACAGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: TKSTSLSIRSLGLASHLTGWPGT*ARHRVK
Trigger: TTTCACCCTGTGCCTTGCCAATGTGCCTGGCCAGCC...AGTCAGATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp GGTGAGAAACGGGCCTGGGTATCAGACAGGGTTGGAATGTCTTCTCTGGGCTGGACATTAATATTGTCATaGCAGAGCATGGCTTCATCG +
Preference number: 5 (lower is better)
Translates to: GEKRAWVSDRVGMSSLGWTLILS*QSMASS
Trigger: CGATGAAGCCATGCTCTGCAATGACAATATTAATGT...CCAGCCCAGAGAAGACATTCCAACCCTGTCTGATACCCAGGCCCGTTTCTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCAGAAGTCAGGGCCTGGAACTTGTCACAAGTTaGGGACATCAGGTTATGATA +
Preference number: 5 (lower is better)
Translates to: HAVFNSLCHSEGGRSQGLELVTS*GHQVMI
Trigger: TATCATAACCTGATGTCCCAAACTTGTGACAAGTTC...CAGGCCCTGACTTCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp GTTCACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCTGTAGATTTTGGAGGTaGCTCAAAAGGGATGCAGCC +
Preference number: 5 (lower is better)
Translates to: VHFMDLSQSGFPDPKHQLCRFWR*LKRDAA
Trigger: GGCTGCATCCCTTTTGAGCAACCTCCAAAATCTACA...GAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAACCCTGAGAGTATTTaGATAATGCAGTCATCCCTA +
Preference number: 5 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQNPESI*IMQSSL
Trigger: TAGGGATGACTGCATTATCAAAATACTCTCAGGGTT...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CATGCAGTATTCAACTCCCTGTGCCACTCAGAGGGAGGCAGAAGTCAGGGCCTGGATTTGCCAACACATTaGTTAGTCTGTAAACAACAC +
Preference number: 5 (lower is better)
Translates to: HAVFNSLCHSEGGRSQGLDLPTH*LVCKQH
Trigger: GTGTTGTTTACAGACTAACAAATGTGTTGGCAAATC...CAGGCCCTGACTTCTGCCTCCCTCTGAGTGGCACAGGGAGTTGAATACTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGCGGATCACATTAATATaGTCATTGCAGAGCATGGCT +
Preference number: 5 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVRITLI*SLQSMA
Trigger: AGCCATGCTCTGCAATGACAATATTAATGTGATCCG...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp AAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGCTTCTTTATCTGGTCTaGGATTCCAGGAAGTTGACT +
Preference number: 5 (lower is better)
Translates to: KVASLIQSTNSGCLWIRVLLYLV*DSRKLT
Trigger: AGTCAACTTCCTGGAATCCAAGACCAGATAAAGAAG...CACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp TCTAGCAGCCCCCACTCCCTACAGAAACCCTGTGCTAAGGCAAAGTTGAGAAGTATTGTCTCACTAACCTaGGCTCATCTCTTTGGCCTA +
Preference number: 5 (lower is better)
Translates to: SSSPHSLQKPCAKAKLRSIVSLT*AHLFGL
Trigger: TAGGCCAAAGAGATGAGCCAAGGTTAGTGAGACAAT...ACTTCTCAACTTTGCCTTAGCACAGGGTTTCTGTAGGGAGTGGGGGCTGCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp GAGTTCCTCCAGGGAAGGAACGCTTCAGGTCATGGAGAAGTTCAAGGGGAAAATTGTTGCTCCACCTTATaGTCTCAAGGCCGTAATCTC +
Preference number: 5 (lower is better)
Translates to: EFLQGRNASGHGEVQGENCCSTL*SQGRNL
Trigger: GAGATTACGGCCTTGAGACAATAAGGTGGAGCAACA...ATTTTCCCCTTGAACTTCTCCATGACCTGAAGCGTTCCTTCCCTGGAGGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp ACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATCTGACTTGGTGCAAGCTGTCTTaGGGCGACAGCGTGCCATCA +
Preference number: 5 (lower is better)
Translates to: TKSTSLSIRSLGLASHLTWCKLS*GDSVPS
Trigger: TGATGGCACGCTGTCGCCCAAAGACAGCTTGCACCA...AGTCAGATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp GCTTCATCGATTGGTGAAAAATCGACGTGTTCATCTCAACACCAGGAAGTGCATCCACTAATGCTGAGTTaGCCCAGACCTTGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: ASSIGEKSTCSSQHQEVHPLMLS*PRPWVL
Trigger: CAGCACCCAAGGTCTGGGCAAACTCAGCATTAGTGG...ATGCACTTCCTGGTGTTGAGATGAACACGTCGATTTTTCACCAATCGATGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp TCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGGAGAGGTTAAGTAACTaGCATCAAGTCAGAGAGTTA +
Preference number: 5 (lower is better)
Translates to: SQSGFPDPKHQLRVPLDQERLSN*HQVREL
Trigger: TAACTCTCTGACTTGATGCAAGTTACTTAACCTCTC...CTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp TATTGTCATTGCAGAGCATGGCTTCATCGATTGGTGAAAAATCGACGTGTTCATCAGCGGGGACCTCTCTaGTCCACATCGCACGCAAAC +
Preference number: 5 (lower is better)
Translates to: YCHCRAWLHRLVKNRRVHQRGPL*STSHAN
Trigger: GTTTGCGTGCGATGTGGACAAGAGAGGTCCCCGCTG...ATGAACACGTCGATTTTTCACCAATCGATGAAGCCATGCTCTGCAATGACAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553935.6
CDS TCA 90 bp CAACTGACTAGATGCAAGTGCCATGGCCTAGAGAGGAAACAAAGATaGATCCAAGGTGGTCTCCCAGTAGCATCCTATCTGCCAACCATA +
Preference number: 5 (lower is better)
Translates to: QLTRCKCHGLERKQR*IQGGLPVASYLPTI
Trigger: TATGGTTGGCAGATAGGATGCTACTGGGAGACCACCTTGGATTCATCTTTGTTTCCTCTCTAGGCCATGGCACTTGCATCTAGTCAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556255.1
CDS-3UTR CAA 90 bp TGTTCTGTTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCATCAGGTTGGGACTCCCGGAACTGGTCATaGGAGACAATTATCCCATCT +
Preference number: 5 (lower is better)
Translates to: CSVAPPYCLKAVISSGWDSRNWS*ETIIPS
Trigger: AGATGGGATAATTGTCTCCAATGACCAGTTCCGGGA...GTCCCAACCTGATGAGATTACGGCCTTGAGACAATAAGGTGGAGCAACAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp TCCCTGATCCAAAGCACCAACTCAGGGTGCCTCTGGATCAGAGTGAGCAGCAGAGATTTGCCAACACATTaGTTAGTCTGTAAACAACAC +
Preference number: 5 (lower is better)
Translates to: SLIQSTNSGCLWIRVSSRDLPTH*LVCKQH
Trigger: GTGTTGTTTACAGACTAACAAATGTGTTGGCAAATC...TCTGCTGCTCACTCTGATCCAGAGGCACCCTGAGTTGGTGCTTTGGATCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp AGAACAGAACCCAGGGGCACCTGTCCTACTTCTTTATCTGGTCTTGGATTCCAGTTGGATTCCAGGAAGTaGACTGGCTCTGTATTGTTC +
Preference number: 5 (lower is better)
Translates to: RTEPRGTCPTSLSGLGFQLDSRK*TGSVLF
Trigger: GAACAATACAGAGCCAGTCAACTTCCTGGAATCCAA...CTGGAATCCAAGACCAGATAAAGAAGTAGGACAGGTGCCCCTGGGTTCTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp TTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGGTGTTCTTGGTCCTTCAGTaGCCAAAAGAACTTGTCACA +
Preference number: 5 (lower is better)
Translates to: FMDLSQSGFPDPKHQLRVFLVLQ*PKELVT
Trigger: TGTGACAAGTTCTTTTGGCAACTGAAGGACCAAGAA...CACCCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CACTTTATGGACCTGTCCCAAAGTGGCTTCCCTGATCCAAAGCACCAACTCAGGTTTCCCATTGTTCTGTaGCTCCACCTTATTGTCTCA +
Preference number: 5 (lower is better)
Translates to: HFMDLSQSGFPDPKHQLRFPIVL*LHLIVS
Trigger: TGAGACAATAAGGTGGAGCAACAGAACAATGGGAAA...CCTGAGTTGGTGCTTTGGATCAGGGAAGCCACTTTGGGACAGGTCCATAAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CTCCAAGAGGCTTTCCTCTATGTTCTCATTTCTCCTCCCAACAGGTATTTTTACGCCCAGGAGGGGACTTaGACTTTTTCTCCAACCTCG +
Preference number: 5 (lower is better)
Translates to: LQEAFLYVLISPPNRYFYAQEGT*TFSPTS
Trigger: CGAGGTTGGAGAAAAAGTCAAAGTCCCCTCCTGGGC...GTAAAAATACCTGTTGGGAGGAGAAATGAGAACATAGAGGAAAGCCTCTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp AGTTTATCAGGCTGCAGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGCCCAGGAGGGGACTTaGACTTTTTCTCCAACCTCG +
Preference number: 5 (lower is better)
Translates to: SLSGCSRTKSTSLSIRSLAQEGT*TFSPTS
Trigger: CGAGGTTGGAGAAAAAGTCAAAGTCCCCTCCTGGGC...TAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCTGCAGCCTGATAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp TGTTCTGTTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCATCAGGTTGGGACAGTTCCTGGTCACCTTaGGGACCAAGTAATTGCAAA +
Preference number: 5 (lower is better)
Translates to: CSVAPPYCLKAVISSGWDSSWSP*GPSNCK
Trigger: TTTGCAATTACTTGGTCCCAAAGGTGACCAGGAACT...GTCCCAACCTGATGAGATTACGGCCTTGAGACAATAAGGTGGAGCAACAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CTCCAAGAGGCTTTCCTCTATGTTCTCATTTCTCCTCCCAACAGGTATTTTTACCTAGAGACCACCCAATaGCTGGCTAAAGCCATCACC +
Preference number: 5 (lower is better)
Translates to: LQEAFLYVLISPPNRYFYLETTQ*LAKAIT
Trigger: GGTGATGGCTTTAGCCAGCAATTGGGTGGTCTCTAG...GTAAAAATACCTGTTGGGAGGAGAAATGAGAACATAGAGGAAAGCCTCTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp ACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATCTGACTCTAGAGACCACCCAATaGCTGGCTAAAGCCATCACC +
Preference number: 5 (lower is better)
Translates to: TKSTSLSIRSLGLASHLTLETTQ*LAKAIT
Trigger: GGTGATGGCTTTAGCCAGCAATTGGGTGGTCTCTAG...AGTCAGATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp AAAGAACTTGTCACAAGTTTGGGACATCAGGTTATGATAAAGATAGACACTAGACGTAAGTGTCTCCCCTaGCTCCCCTGCAATCTCCGG +
Preference number: 5 (lower is better)
Translates to: KELVTSLGHQVMIKIDTRRKCLP*LPCNLR
Trigger: CCGGAGATTGCAGGGGAGCAAGGGGAGACACTTACG...TCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp AGTTTATCAGGCTGCAGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTATGCACCATGGCCACGTaGCTGCCGTCAATGACAATA +
Preference number: 5 (lower is better)
Translates to: SLSGCSRTKSTSLSIRSLCTMAT*LPSMTI
Trigger: TATTGTCATTGACGGCAGCAACGTGGCCATGGTGCA...TAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCTGCAGCCTGATAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp ACCTACTGTGTAAATGTAGATTTTGGAGGTTGCTCAAAAGGGATGCAGCCATTAGGCCTGGAAAAGATCTaGTCTAGAGACTCCCCACAG +
Preference number: 5 (lower is better)
Translates to: TYCVNVDFGGCSKGMQPLGLEKI*SRDSPQ
Trigger: CTGTGGGGAGTCTCTAGACAAGATCTTTTCCAGGCC...TAATGGCTGCATCCCTTTTGAGCAACCTCCAAAATCTACATTTACACAGTAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp ACACACATAAAGCAGAAGTGTGCCTTGCTTTATGCAACATACGTCTTCCATAGAGGCCTGGAAAAGATCTaGTCTAGAGACTCCCCACAG +
Preference number: 5 (lower is better)
Translates to: THIKQKCALLYATYVFHRGLEKI*SRDSPQ
Trigger: CTGTGGGGAGTCTCTAGACAAGATCTTTTCCAGGCC...TCTATGGAAGACGTATGTTGCATAAAGCAAGGCACACTTCTGCTTTATGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS TCA 90 bp TTCACCATGAACCTGTCTCCAAAACCACAGCAACCGAGAGAGGGTTaGAAAATTACCTACTGGGTACAATGTTCACTGTTTGGATCATGG +
Preference number: 5 (lower is better)
Translates to: FTMNLSPKPQQPREG*KITYWVQCSLFGSW
Trigger: CCATGATCCAAACAGTGAACATTGTACCCAGTAGGTAATTTTTCAACCCTCTCTCGGTTGCTGTGGTTTTGGAGACAGGTTCATGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556255.1
CDS-3UTR CAA 90 bp AAAGAACTTGTCACAAGTTTGGGACATCAGGTTATGATAAAGATAGACACTAGAGCCTCAGACAGTTGGTaGATGTCCCGGCAGTATGGC +
Preference number: 5 (lower is better)
Translates to: KELVTSLGHQVMIKIDTRASDSW*MSRQYG
Trigger: GCCATACTGCCGGGACATCAACCAACTGTCTGAGGC...TCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CTCCAAGAGGCTTTCCTCTATGTTCTCATTTCTCCTCCCAACAGGTATTTTTACTGTTGCTCCACCTTATaGTCTCAAGGCCGTAATCTC +
Preference number: 5 (lower is better)
Translates to: LQEAFLYVLISPPNRYFYCCSTL*SQGRNL
Trigger: GAGATTACGGCCTTGAGACAATAAGGTGGAGCAACA...GTAAAAATACCTGTTGGGAGGAGAAATGAGAACATAGAGGAAAGCCTCTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp ACTCAGTCAACCAGGGCCCTTAGCACAAAAGGGCAGAAGACACTTTTGGTCTACCACACCAGCCACTATTaGAAGTGTTTTATGCTTATT +
Preference number: 5 (lower is better)
Translates to: TQSTRALSTKGQKTLLVYHTSHY*KCFMLI
Trigger: AATAAGCATAAAACACTTCAAATAGTGGCTGGTGTG...GTAGACCAAAAGTGTCTTCTGCCCTTTTGTGCTAAGGGCCCTGGTTGACTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp CTCCAAGAGGCTTTCCTCTATGTTCTCATTTCTCCTCCCAACAGGTATTTTTACAAGCAGAAGTGTGCCTaGCTTTATGCAACATACGTC +
Preference number: 5 (lower is better)
Translates to: LQEAFLYVLISPPNRYFYKQKCA*LYATYV
Trigger: GACGTATGTTGCATAAAGCAAGGCACACTTCTGCTT...GTAAAAATACCTGTTGGGAGGAGAAATGAGAACATAGAGGAAAGCCTCTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp ACACACATAAAGCAGAAGTGTGCCTTGCTTTATGCAACATACGTCTTCCATAGATCACCGTTTCCCTTCTaGGTCCTTCAGTTGCCAAAA +
Preference number: 5 (lower is better)
Translates to: THIKQKCALLYATYVFHRSPFPF*VLQLPK
Trigger: TTTTGGCAACTGAAGGACCAAGAAGGGAAACGGTGA...TCTATGGAAGACGTATGTTGCATAAAGCAAGGCACACTTCTGCTTTATGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp AGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATATTGTCTCACTAACCTaGGCTCATCTCTTTGGCCTA +
Preference number: 5 (lower is better)
Translates to: SRTKSTSLSIRSLGLASHIVSLT*AHLFGL
Trigger: TAGGCCAAAGAGATGAGCCAAGGTTAGTGAGACAAT...ATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp ACACACATAAAGCAGAAGTGTGCCTTGCTTTATGCAACATACGTCTTCCATAGACAGTCCTCTTTCCCATaGTTCTGTTGCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: THIKQKCALLYATYVFHRQSSFP*FCCSTL
Trigger: TAAGGTGGAGCAACAGAACAATGGGAAAGAGGACTG...TCTATGGAAGACGTATGTTGCATAAAGCAAGGCACACTTCTGCTTTATGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp AAAGAACTTGTCACAAGTTTGGGACATCAGGTTATGATAAAGATAGACACTAGATCAGTAACAGCAGAGTaGGTCTGGTGGCCAGTCAAG +
Preference number: 5 (lower is better)
Translates to: KELVTSLGHQVMIKIDTRSVTAE*VWWPVK
Trigger: CTTGACTGGCCACCAGACCAACTCTGCTGTTACTGA...TCTAGTGTCTATCTTTATCATAACCTGATGTCCCAAACTTGTGACAAGTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp TTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTTCAGTAACAGCAGAGTaGGTCTGGTGGCCAGTCAAG +
Preference number: 5 (lower is better)
Translates to: LIFSTPCKISQFGFSTCPSVTAE*VWWPVK
Trigger: CTTGACTGGCCACCAGACCAACTCTGCTGTTACTGA...AGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp ACAAAGTCAACATCCCTGTCTATAAGAAGCTTAGGACTTGCCTCTCATCTGACTCTTCTTTATCTGGTCTaGGATTCCAGGAAGTTGACT +
Preference number: 5 (lower is better)
Translates to: TKSTSLSIRSLGLASHLTLLYLV*DSRKLT
Trigger: AGTCAACTTCCTGGAATCCAAGACCAGATAAAGAAG...AGTCAGATGAGAGGCAAGTCCTAAGCTTCTTATAGACAGGGATGTTGACTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp TCACTAACCTTGGCTCATCTCTTTGGCCTAGATTCTCCTGGGATTTACTTCAAGGAGAGGTTAAGTAACTaGCATCAAGTCAGAGAGTTA +
Preference number: 5 (lower is better)
Translates to: SLTLAHLFGLDSPGIYFKERLSN*HQVREL
Trigger: TAACTCTCTGACTTGATGCAAGTTACTTAACCTCTC...CTTGAAGTAAATCCCAGGAGAATCTAGGCCAAAGAGATGAGCCAAGGTTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp AGTTTATCAGGCTGCAGCAGAACAAAGTCAACATCCCTGTCTATAAGAAGCTTACATCTAACCAGGGATTaGCCAACACATTTGTTAGTC +
Preference number: 5 (lower is better)
Translates to: SLSGCSRTKSTSLSIRSLHLTRD*PTHLLV
Trigger: GACTAACAAATGTGTTGGCAAATCCCTGGTTAGATG...TAAGCTTCTTATAGACAGGGATGTTGACTTTGTTCTGCTGCAGCCTGATAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp ACCTACTGTGTAAATGTAGATTTTGGAGGTTGCTCAAAAGGGATGCAGCCATTATTTCCCATTGTTCTGTaGCTCCACCTTATTGTCTCA +
Preference number: 5 (lower is better)
Translates to: TYCVNVDFGGCSKGMQPLFPIVL*LHLIVS
Trigger: TGAGACAATAAGGTGGAGCAACAGAACAATGGGAAA...TAATGGCTGCATCCCTTTTGAGCAACCTCCAAAATCTACATTTACACAGTAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS-3UTR CAA 90 bp ACCTACTGTGTAAATGTAGATTTTGGAGGTTGCTCAAAAGGGATGCAGCCATTACACACCAGCCACTATTaGAAGTGTTTTATGCTTATT +
Preference number: 5 (lower is better)
Translates to: TYCVNVDFGGCSKGMQPLHTSHY*KCFMLI
Trigger: AATAAGCATAAAACACTTCAAATAGTGGCTGGTGTG...TAATGGCTGCATCCCTTTTGAGCAACCTCCAAAATCTACATTTACACAGTAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251343.9
ENST00000553935.6
CDS GCA 72 bp GCCAGTGCTCCTGGCCCCTGCCCACTAGACGCCTCCTaGACCAGACTCAGCAGCTCCTCCTGGACAGCCAGG +
Preference number: 6 (lower is better)
Translates to: ASAPGPCPLDAS*TRLSSSSWTAR
Trigger: CCTGGCTGTCCAGGAGGAGCTGCTGAGTCTGGTGCAGGAGGCGTCTAGTGGGCAGGGGCCAGGAGCACTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS CCA 72 bp AGTGCTGTCCCATCCAGCAGGGCTGCCCTGAAGCTCTaGCTGCAGCCCTCCCGTCCAGTGGGCAGGCGGCTT +
Preference number: 6 (lower is better)
Translates to: SAVPSSRAALKL*LQPSRPVGRRL
Trigger: AAGCCGCCTGCCCACTGGACGGGAGGGCTGCAGCCAGAGCTTCAGGGCAGCCCTGCTGGATGGGACAGCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251343.9
CDS CCA 72 bp CACAGTGCCATGGGGGTTCCGGTGCAGGTGGAGGGCTaGGCACCCTCGGAGGAGAGGCATTCCCATTGTGGA +
Preference number: 6 (lower is better)
Translates to: HSAMGVPVQVEG*APSEERHSHCG
Trigger: TCCACAATGGGAATGCCTCTCCTCCGAGGGTGCCCAGCCCTCCACCTGCACCGGAACCCCCATGGCACTGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS TCA 72 bp CCGGACAGTCCTTCGGAAGGACGCTCACCCCCACGCTaGAGATGCGCTCCACATGGGGCTGCTGTTCCCGAA +
Preference number: 6 (lower is better)
Translates to: PDSPSEGRSPPR*RCAPHGAAVPE
Trigger: TTCGGGAACAGCAGCCCCATGTGGAGCGCATCTTCAGCGTGGGGGTGAGCGTCCTTCCGAAGGACTGTCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556510.1
ENST00000556842.5
CDS CAA 90 bp CCCACGCTGAAGATGCGCTCCACATGGGGCTGCTGTTCCCGAACCTaGTTCTCAGCCTCCGCAGACACCGCAAAGCGATCTGGGGACGCG +
Preference number: 6 (lower is better)
Translates to: PTLKMRSTWGCCSRT*FSASADTAKRSGDA
Trigger: CGCGTCCCCAGATCGCTTTGCGGTGTCTGCGGAGGCTGAGAACAAGGTTCGGGAACAGCAGCCCCATGTGGAGCGCATCTTCAGCGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556510.1
ENST00000556842.5
CDS CAA 90 bp GGCACATTGGCAAGGCACAGGGTGAAAGGATCCTGCAGGGCCTCCTaGAAACGCTGTGTGCCAGTCACCAAGTTGCCCCCTCGGGCGCCT +
Preference number: 6 (lower is better)
Translates to: GTLARHRVKGSCRAS*KRCVPVTKLPPRAP
Trigger: AGGCGCCCGAGGGGGCAACTTGGTGACTGGCACACAGCGTTTCAAGGAGGCCCTGCAGGATCCTTTCACCCTGTGCCTTGCCAATGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS GCA 72 bp CTCACCCCCACGCTGAAGATGCGCTCCACATGGGGCTaGTGTTCCCGAACCTTGTTCTCAGCCTCCGCAGAC +
Preference number: 6 (lower is better)
Translates to: LTPTLKMRSTWG*CSRTLFSASAD
Trigger: GTCTGCGGAGGCTGAGAACAAGGTTCGGGAACAGCAGCCCCATGTGGAGCGCATCTTCAGCGTGGGGGTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556510.1
ENST00000556842.5
CDS CCA 72 bp GACGTGCTCCAGGCCAGGCAGTCAAGGAAGAAGCCCTaGGCTCCCAGAAAGATGCAGTGCAGTTTGGGCGGG +
Preference number: 6 (lower is better)
Translates to: DVLQARQSRKKP*APRKMQCSLGG
Trigger: CCCGCCCAAACTGCACTGCATCTTTCTGGGAGCCCAGGGCTTCTTCCTTGACTGCCTGGCCTGGAGCACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556510.1
ENST00000556842.5
CDS CCA 72 bp CACTCCAGTACACTGAGAGGCTCCGGAAGATGGTCCTaGCGTGAAGTCCCAGCTCAGCCGCTCTGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: HSSTLRGSGRWS*REVPAQPLCQL
Trigger: GAGCTGGCAGAGCGGCTGAGCTGGGACTTCACGCCAGGACCATCTTCCGGAGCCTCTCAGTGTACTGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS GCA 72 bp GGGATTGAACTAGGCTGTCCTCTGGGGGCCCTGGTCTaGCATTTCCAAGGTTCAAGCCACTCCCACCCCTCC +
Preference number: 6 (lower is better)
Translates to: GIELGCPLGALV*HFQGSSHSHPS
Trigger: GGAGGGGTGGGAGTGGCTTGAACCTTGGAAATGGCAGACCAGGGCCCCCAGAGGACAGCCTAGTTCAATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556510.1
CDS CCA 72 bp TCTCAGCACTCCAGTACACTGAGAGGCTCCGGAAGATaGTCCTGGCGTGAAGTCCCAGCTCAGCCGCTCTGC +
Preference number: 6 (lower is better)
Translates to: SQHSSTLRGSGR*SWREVPAQPLC
Trigger: GCAGAGCGGCTGAGCTGGGACTTCACGCCAGGACCATCTTCCGGAGCCTCTCAGTGTACTGGAGTGCTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS CCA 72 bp CTAGACGCCTCCTGCACCAGACTCAGCAGCTCCTCCTaGACAGCCAGGGGCAACTGCAACAGAGCCTCTCTA +
Preference number: 6 (lower is better)
Translates to: LDASCTRLSSSS*TARGNCNRASL
Trigger: TAGAGAGGCTCTGTTGCAGTTGCCCCTGGCTGTCCAGGAGGAGCTGCTGAGTCTGGTGCAGGAGGCGTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS CCA 72 bp CACGGTGACCACGGTCCCAGAAGTACTGCACAGCAATaGCAATGCCCCGGCTGGAGAAGTAGTGCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: HGDHGPRSTAQQ*QCPGWRSSAGG
Trigger: GCCTCCAGCACTACTTCTCCAGCCGGGGCATTGCCATTGCTGTGCAGTACTTCTGGGACCGTGGTCACCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS TCA 72 bp CAGCTCAGCCGCTCTGCCAGCTCTTCTACCCGGCTCTaGGCCATGACAAAGGCTTCAGTCAGGCCACTGATC +
Preference number: 6 (lower is better)
Translates to: QLSRSASSSTRL*AMTKASVRPLI
Trigger: GATCAGTGGCCTGACTGAAGCCTTTGTCATGGCTCAGAGCCGGGTAGAAGAGCTGGCAGAGCGGCTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS GCA 72 bp TGCAACAGAGCCTCTCTATGGGCATCCCCCGGGGACTaGAGCAGGGCAGAGAAGTCTCTCAGCACTCCAGTA +
Preference number: 6 (lower is better)
Translates to: CNRASLWASPGD*SRAEKSLSTPV
Trigger: TACTGGAGTGCTGAGAGACTTCTCTGCCCTGCTGCAGTCCCCGGGGGATGCCCATAGAGAGGCTCTGTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS GCA 72 bp CCCTCCCTCCTTCTCCACAGCGTAAGTGTCTCCCCTTaGTCCCCTGCAATCTCCGGGTCCCATAGATCCAGT +
Preference number: 6 (lower is better)
Translates to: PSLLLHSVSVSP*SPAISGSHRSS
Trigger: ACTGGATCTATGGGACCCGGAGATTGCAGGGGAGCAAGGGGAGACACTTACGCTGTGGAGAAGGAGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS GCA 72 bp CCAGGCACATTGGCAAGGCACAGGGTGAAAGGATCCTaGAGGGCCTCCTTGAAACGCTGTGTGCCAGTCACC +
Preference number: 6 (lower is better)
Translates to: PGTLARHRVKGS*RASLKRCVPVT
Trigger: GGTGACTGGCACACAGCGTTTCAAGGAGGCCCTGCAGGATCCTTTCACCCTGTGCCTTGCCAATGTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS GCA 72 bp GACCACGGTCCCAGAAGTACTGCACAGCAATGGCAATaGCCCGGCTGGAGAAGTAGTGCTGGAGGCCATGCA +
Preference number: 6 (lower is better)
Translates to: DHGPRSTAQQWQ*PGWRSSAGGHA
Trigger: TGCATGGCCTCCAGCACTACTTCTCCAGCCGGGGCATTGCCATTGCTGTGCAGTACTTCTGGGACCGTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS CCA 72 bp CCCAGAAGTACTGCACAGCAATGGCAATGCCCCGGCTaGAGAAGTAGTGCTGGAGGCCATGCACCATGGCCA +
Preference number: 6 (lower is better)
Translates to: PRSTAQQWQCPG*RSSAGGHAPWP
Trigger: TGGCCATGGTGCATGGCCTCCAGCACTACTTCTCCAGCCGGGGCATTGCCATTGCTGTGCAGTACTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS CAA 72 bp GCAAGGCACAGGGTGAAAGGATCCTGCAGGGCCTCCTaGAAACGCTGTGTGCCAGTCACCAAGTTGCCCCCT +
Preference number: 6 (lower is better)
Translates to: ARHRVKGSCRAS*KRCVPVTKLPP
Trigger: AGGGGGCAACTTGGTGACTGGCACACAGCGTTTCAAGGAGGCCCTGCAGGATCCTTTCACCCTGTGCCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS TCA 72 bp AGCAGGGCAGAGAAGTCTCTCAGCACTCCAGTACACTaGGAGGCTCCGGAAGATGGTCCTGGCGTGAAGTCC +
Preference number: 6 (lower is better)
Translates to: SRAEKSLSTPVH*EAPEDGPGVKS
Trigger: GGACTTCACGCCAGGACCATCTTCCGGAGCCTCTCAGTGTACTGGAGTGCTGAGAGACTTCTCTGCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS CCA 72 bp CACGTTGCTGCCGTCAATGACAATATGGCGGAGGTCTaGCTGGCCAGGCACATTGGCAAGGCACAGGGTGAA +
Preference number: 6 (lower is better)
Translates to: HVAAVNDNMAEV*LARHIGKAQGE
Trigger: TTCACCCTGTGCCTTGCCAATGTGCCTGGCCAGCCAGACCTCCGCCATATTGTCATTGACGGCAGCAACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS CAA 72 bp AAGATGCGCTCCACATGGGGCTGCTGTTCCCGAACCTaGTTCTCAGCCTCCGCAGACACCGCAAAGCGATCT +
Preference number: 6 (lower is better)
Translates to: KMRSTWGCCSRT*FSASADTAKRS
Trigger: AGATCGCTTTGCGGTGTCTGCGGAGGCTGAGAACAAGGTTCGGGAACAGCAGCCCCATGTGGAGCGCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556510.1
ENST00000556842.5
CDS CCA 72 bp TTGCTGCCGTCAATGACAATATGGCGGAGGTCTGGCTaGCCAGGCACATTGGCAAGGCACAGGGTGAAAGGA +
Preference number: 6 (lower is better)
Translates to: LLPSMTIWRRSG*PGTLARHRVKG
Trigger: TCCTTTCACCCTGTGCCTTGCCAATGTGCCTGGCCAGCCAGACCTCCGCCATATTGTCATTGACGGCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000556842.5
CDS CCA 72 bp CAGGGCCTCAGACAGTTGGTTGATGTCCCGGCAGTATaGCTCCCGCTGCAGGATGAAGTCCACTTTGTGATC +
Preference number: 6 (lower is better)
Translates to: QGLRQLVDVPAV*LPLQDEVHFVI
Trigger: GATCACAAAGTGGACTTCATCCTGCAGCGGGAGCCATACTGCCGGGACATCAACCAACTGTCTGAGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556255.1
ENST00000556842.5
CDS CCA 72 bp GCTCAAAAGTTAAGACTGAGCAGGGCCTCAGACAGTTaGTTGATGTCCCGGCAGTATGGCTCCCGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: AQKLRLSRASDS*LMSRQYGSRCR
Trigger: CCTGCAGCGGGAGCCATACTGCCGGGACATCAACCAACTGTCTGAGGCCCTGCTCAGTCTTAACTTTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556255.1
ENST00000556842.5
CDS CAA 72 bp GGCTCAAAAGTTAAGACTGAGCAGGGCCTCAGACAGTaGGTTGATGTCCCGGCAGTATGGCTCCCGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GSKVKTEQGLRQ*VDVPAVWLPLQ
Trigger: CTGCAGCGGGAGCCATACTGCCGGGACATCAACCAACTGTCTGAGGCCCTGCTCAGTCTTAACTTTTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556255.1
ENST00000556842.5
CDS CAA 90 bp GGTGAGGCTCAAAAGTTAAGACTGAGCAGGGCCTCAGACAGTTGGTaGATGTCCCGGCAGTATGGCTCCCGCTGCAGGATGAAGTCCACT +
Preference number: 6 (lower is better)
Translates to: GEAQKLRLSRASDSW*MSRQYGSRCRMKST
Trigger: AGTGGACTTCATCCTGCAGCGGGAGCCATACTGCCGGGACATCAACCAACTGTCTGAGGCCCTGCTCAGTCTTAACTTTTGAGCCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556255.1
ENST00000556842.5
CDS TCA 72 bp CACCTAGTTAAGGCTCTGGTAAACAGCCCCAGGAGGTaGCAAGCATCTGAGTCCACTGGAGGTAGGGAGGGT +
Preference number: 6 (lower is better)
Translates to: HLVKALVNSPRR*QASESTGGREG
Trigger: ACCCTCCCTACCTCCAGTGGACTCAGATGCTTGTCACCTCCTGGGGCTGTTTACCAGAGCCTTAACTAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556510.1
CDS TCA 72 bp CTTCTGGTGATGGAGATCTGGCCCCCTACCTCACCTTaGCCCAGCTACAGGCAACTGACTAGATGCAAGTGC +
Preference number: 6 (lower is better)
Translates to: LLVMEIWPPTSP*PSYRQLTRCKC
Trigger: GCACTTGCATCTAGTCAGTTGCCTGTAGCTGGGTCAAGGTGAGGTAGGGGGCCAGATCTCCATCACCAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556255.1
CDS CCA 72 bp CCCGGTAAACAAGGCTGTCTATCGAGAGTGGGCGTCTaGGCTTTGGAAAAGGATGACCACAGTCCGGAGCAA +
Preference number: 6 (lower is better)
Translates to: PGKQGCLSRVGV*ALEKDDHSPEQ
Trigger: TTGCTCCGGACTGTGGTCATCCTTTTCCAAAGCCCAGACGCCCACTCTCGATAGACAGCCTTGTTTACCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556510.1
CDS CAA 72 bp CAAAAGTTAAGACTGAGCAGGGCCTCAGACAGTTGGTaGATGTCCCGGCAGTATGGCTCCCGCTGCAGGATG +
Preference number: 6 (lower is better)
Translates to: QKLRLSRASDSW*MSRQYGSRCRM
Trigger: CATCCTGCAGCGGGAGCCATACTGCCGGGACATCAACCAACTGTCTGAGGCCCTGCTCAGTCTTAACTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251343.9
ENST00000553935.6
ENST00000554268.1
ENST00000556255.1
ENST00000556842.5
CDS CAA 90 bp CCACCCTGCCCAACCAATCCCTTGCAAATCCAACATGCCTTTCCTTaGAAAAGCCTTGTGCTCTGCTCCCTTCCTTCCCAGGCCCACCAT +
Preference number: 6 (lower is better)
Translates to: PPCPTNPLQIQHAFP*KSLVLCSLPSQAHH
Trigger: ATGGTGGGCCTGGGAAGGAAGGGAGCAGAGCACAAGGCTTTTCAAAGGAAAGGCATGTTGGATTTGCAAGGGATTGGTTGGGCAGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556255.1
CDS CCA 72 bp AACAAGGCTGTCTATCGAGAGTGGGCGTCTGGGCTTTaGAAAAGGATGACCACAGTCCGGAGCAAGAAGGGT +
Preference number: 6 (lower is better)
Translates to: NKAVYREWASGL*KRMTTVRSKKG
Trigger: ACCCTTCTTGCTCCGGACTGTGGTCATCCTTTTCCAAAGCCCAGACGCCCACTCTCGATAGACAGCCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556510.1
CDS CCA 72 bp GAGGAAGTCCCGGTAAACAAGGCTGTCTATCGAGAGTaGGCGTCTGGGCTTTGGAAAAGGATGACCACAGTC +
Preference number: 6 (lower is better)
Translates to: EEVPVNKAVYRE*ASGLWKRMTTV
Trigger: GACTGTGGTCATCCTTTTCCAAAGCCCAGACGCCCACTCTCGATAGACAGCCTTGTTTACCGGGACTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556510.1
CDS CCA 72 bp CAGCTCAGAGCCTCATTGTACCCTCCATCCAAATCCTaGTTCCTGGGACTACACCAGCTATCAACAGGTCGC +
Preference number: 6 (lower is better)
Translates to: QLRASLYPPSKS*FLGLHQLSTGR
Trigger: GCGACCTGTTGATAGCTGGTGTAGTCCCAGGAACCAGGATTTGGATGGAGGGTACAATGAGGCTCTGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556510.1
CDS CAA 72 bp AAACAAGGCTGTCTATCGAGAGTGGGCGTCTGGGCTTaGGAAAAGGATGACCACAGTCCGGAGCAAGAAGGG +
Preference number: 6 (lower is better)
Translates to: KQGCLSRVGVWA*EKDDHSPEQEG
Trigger: CCCTTCTTGCTCCGGACTGTGGTCATCCTTTTCCAAAGCCCAGACGCCCACTCTCGATAGACAGCCTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556510.1
CDS CCA 72 bp GAGCCTCATTGTACCCTCCATCCAAATCCTGGTTCCTaGGACTACACCAGCTATCAACAGGTCGCACCTAGT +
Preference number: 6 (lower is better)
Translates to: EPHCTLHPNPGS*DYTSYQQVAPS
Trigger: ACTAGGTGCGACCTGTTGATAGCTGGTGTAGTCCCAGGAACCAGGATTTGGATGGAGGGTACAATGAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556510.1
CDS CCA 72 bp CCATGGCCTAGAGAGGAAACAAAGATGAATCCAAGGTaGTCTCCCAGTAGCATCCTATCTGCCAACCATAGT +
Preference number: 6 (lower is better)
Translates to: PWPREETKMNPR*SPSSILSANHS
Trigger: ACTATGGTTGGCAGATAGGATGCTACTGGGAGACCACCTTGGATTCATCTTTGTTTCCTCTCTAGGCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556255.1
CDS CAA 90 bp CTTCACCATGAACCTGTCTCCAAAACCACAGCAACCGAGAGAGGGTaGAAAAATTACCTACTGGGTACAATGTTCACTGTTTGGATCATG +
Preference number: 6 (lower is better)
Translates to: LHHEPVSKTTATERG*KNYLLGTMFTVWIM
Trigger: CATGATCCAAACAGTGAACATTGTACCCAGTAGGTAATTTTTCAACCCTCTCTCGGTTGCTGTGGTTTTGGAGACAGGTTCATGGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556255.1
CDS CAA 72 bp GTTGAAAAATTACCTACTGGGTACAATGTTCACTGTTaGGATCATGGTTACATTAAAAGCCTAGACTTCACC +
Preference number: 6 (lower is better)
Translates to: VEKLPTGYNVHC*DHGYIKSLDFT
Trigger: GGTGAAGTCTAGGCTTTTAATGTAACCATGATCCAAACAGTGAACATTGTACCCAGTAGGTAATTTTTCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556255.1