RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KHK (Homo sapiens)

Ensembl gene IDs: ENSG00000138030

Ensembl transcript IDs: ENST00000260598.10, ENST00000260599.10, ENST00000429697.1, ENST00000464371.1, ENST00000469936.5, ENST00000490823.5

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTaGGGCACCGAGTGTCCTCCCCAGCCAGGGCAGAGCTGGTGGCAA +
Preference number: 1 (lower is better)
Translates to: GPEELSRFLWQVHWV*GTECPPQPGQSWWQ
Trigger: TTGCCACCAGCTCTGCCCTGGCTGGGGAGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR TCA 90 bp CCACTGGCCTGTCAGTTCAGCTCAGCGGTGTGGACTCCCAGCTTCTaGGCTGTGGGAATAGAGTCTGCACAACGCAGGGCCCCGAAGAGC +
Preference number: 1 (lower is better)
Translates to: PLACQFSSAVWTPSF*AVGIESAQRRAPKS
Trigger: GCTCTTCGGGGCCCTGCGTTGTGCAGACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAGCTGAACTGACAGGCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR CCA 90 bp ACAGCTTGCATCTGTCCCCTGAACAGGGCAACCTGGACGCCAGGCTaGATGGAGGGGAGAAGGCGATGCAGCCGCAATGGTAGTCTCCAT +
Preference number: 1 (lower is better)
Translates to: TACICPLNRATWTPG*MEGRRRCSRNGSLH
Trigger: ATGGAGACTACCATTGCGGCTGCATCGCCTTCTCCCCTCCATCCAGCCTGGCGTCCAGGTTGCCCTGTTCAGGGGACAGATGCAAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR GCA 90 bp CTCAGCGGTGTGGACTCCCAGCTTCTGAGCTGTGGGAATAGAGTCTaGACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAG +
Preference number: 1 (lower is better)
Translates to: LSGVDSQLLSCGNRV*TTQGPEELSRFLWQ
Trigger: CTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR TCA 90 bp TTTCAGGCTCTGGGGCAGTCAGCGGGAGGAGGTATTTCTGGACAATaGAGACCCCATCAAATCACAGGCTGGTGGGCAGGGCAGAGGAGG +
Preference number: 1 (lower is better)
Translates to: FQALGQSAGGGISGQ*RPHQITGWWAGQRR
Trigger: CCTCCTCTGCCCTGCCCACCAGCCTGTGATTTGATGGGGTCTTCATTGTCCAGAAATACCTCCTCCCGCTGACTGCCCCAGAGCCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR CCA 90 bp GACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTTGTaGCTGAGGCACGCCCTTAATTCCAAGGTGGGCTCCAAGGGTGAG +
Preference number: 1 (lower is better)
Translates to: DLPEDSNTLYPGSHL*LRHALNSKVGSKGE
Trigger: CTCACCCTTGGAGCCCACCTTGGAATTAAGGGCGTGCCTCAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR TCA 90 bp TCCCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTTGTGGCTaGGGCACGCCCTTAATTCCAAGGTGGGCTCCAAGGGTGAGACTT +
Preference number: 1 (lower is better)
Translates to: SLRTATLCILGHICG*GTPLIPRWAPRVRL
Trigger: AAGTCTCACCCTTGGAGCCCACCTTGGAATTAAGGGCGTGCCTCAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR TCA 90 bp ATGCCCAGCCAGAGCAGTTCAGACATTGAGAGGAGAAGCTGGCTCTaGGGAAGATTTATTTGCTCTGAGGCTCTGCATCCCCCAGCCATC +
Preference number: 1 (lower is better)
Translates to: MPSQSSSDIERRSWL*GRFICSEALHPPAI
Trigger: GATGGCTGGGGGATGCAGAGCCTCAGAGCAAATAAATCTTCCTCAGAGCCAGCTTCTCCTCTCAATGTCTGAACTGCTCTGGCTGGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR CCA 90 bp TACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATATTaGAGTTGGCCCCAATTCCAATATGTGTTCCAGATCGGACCTCCC +
Preference number: 1 (lower is better)
Translates to: YIICSLHYKALPTLY*SWPQFQYVFQIGPP
Trigger: GGGAGGTCCGATCTGGAACACATATTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR GCA 90 bp GATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTACATTATATaGTCTTTACATTATAAGGCCTTACCCACCCTATATTGGAGTTGG +
Preference number: 1 (lower is better)
Translates to: DFNPGLSHSKALYII*SLHYKALPTLYWSW
Trigger: CCAACTCCAATATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CCA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCAGGCAGCCCCTCCTCTaGGCCTGGGCGGAGAGGTTA +
Preference number: 2 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGRQPLL*AWAERL
Trigger: TAACCTCTCCGCCCAGGCCCAGAGGAGGGGCTGCCT...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR GCA 90 bp GAGTCTGCACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCCAGGGCACTTCTCGCTaGTCTAGCCCAGGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: ESAQRRAPKSSHGFFGRFQGTSR*SSPGSP
Trigger: GGGGCTGCCTGGGCTAGAGCAGCGAGAAGTGCCCTG...GAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR GCA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCGAGGGGAGAAGGCGATaGAGCCGCAATGGTAGTCTC +
Preference number: 2 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGEGRRR*SRNGSL
Trigger: GAGACTACCATTGCGGCTGCATCGCCTTCTCCCCTC...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR GCA 90 bp TCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTTGTGGCTGTTTGCTCTGAGGCTCTaGATCCCCCAGCCATCCCCC +
Preference number: 2 (lower is better)
Translates to: SDLPEDSNTLYPGSHLWLFALRL*IPQPSP
Trigger: GGGGGATGGCTGGGGGATGCAGAGCCTCAGAGCAAA...CAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CCA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTAGGCAGCCCCTCCTCTaGGCCTGGGCGGAGAGGTTA +
Preference number: 2 (lower is better)
Translates to: ICVPDRTSLRTATLCILGRQPLL*AWAERL
Trigger: TAACCTCTCCGCCCAGGCCCAGAGGAGGGGCTGCCT...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR CAA 90 bp TCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTaGTGGCTGAGGCACGCCCTTAATTCCAAGGTGGGCTCCAAGGGT +
Preference number: 2 (lower is better)
Translates to: SDLPEDSNTLYPGSH*WLRHALNSKVGSKG
Trigger: ACCCTTGGAGCCCACCTTGGAATTAAGGGCGTGCCTCAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR GCA 90 bp TCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTTGTGGCTGGAGGGGAGAAGGCGATaGAGCCGCAATGGTAGTCTC +
Preference number: 2 (lower is better)
Translates to: SDLPEDSNTLYPGSHLWLEGRRR*SRNGSL
Trigger: GAGACTACCATTGCGGCTGCATCGCCTTCTCCCCTC...CAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR TCA 90 bp GAGTCTGCACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCAAGATTTATTTGCTCTaGGGCTCTGCATCCCCCAGC +
Preference number: 2 (lower is better)
Translates to: ESAQRRAPKSSHGFFGRFKIYLL*GSASPS
Trigger: GCTGGGGGATGCAGAGCCTCAGAGCAAATAAATCTT...GAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR TCA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTAAGATTTATTTGCTCTaGGGCTCTGCATCCCCCAGC +
Preference number: 2 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPKIYLL*GSASPS
Trigger: GCTGGGGGATGCAGAGCCTCAGAGCAAATAAATCTT...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR GCA 90 bp TCAGTTCAGCTCAGCGGTGTGGACTCCCAGCTTCTGAGCTGTGGGAATAGAGTCTCAGAGCCTCAGGAATaGCCAGCCAGAGCAGTTCAG +
Preference number: 2 (lower is better)
Translates to: SVQLSGVDSQLLSCGNRVSEPQE*PARAVQ
Trigger: CTGAACTGCTCTGGCTGGGCATTCCTGAGGCTCTGA...GACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAGCTGAACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CCA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCAGAGCCTCTCCCTGTaGGGAACACAGGACACAGGC +
Preference number: 2 (lower is better)
Translates to: ICVPDRTSLRTATLCILGQSLSL*GTQDTG
Trigger: GCCTGTGTCCTGTGTTCCCCACAGGGAGAGGCTCTG...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CCA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCCCCTCCTCTGGGCCTaGGCGGAGAGGTTAATTTGG +
Preference number: 2 (lower is better)
Translates to: ICVPDRTSLRTATLCILGPLLWA*AERLIW
Trigger: CCAAATTAACCTCTCCGCCCAGGCCCAGAGGAGGGG...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR GCA 90 bp ACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGTTCCAGATCGGACCTCCCTTTGCTCTGAGGCTCTaGATCCCCCAGCCATCCCCC +
Preference number: 2 (lower is better)
Translates to: TLYWSWPQFQYVFQIGPPFALRL*IPQPSP
Trigger: GGGGGATGGCTGGGGGATGCAGAGCCTCAGAGCAAA...GGGAGGTCCGATCTGGAACACATATTGGAATTGGGGCCAACTCCAATATAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR TCA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTGAGCAGTTCAGACATTaGGAGGAGAAGCTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: ICVPDRTSLRTATLCILGEQFRH*EEKLAL
Trigger: CAGAGCCAGCTTCTCCTCTCAATGTCTGAACTGCTC...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR GCA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTCAGGGCACTTCTCGCTaGTCTAGCCCAGGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFQGTSR*SSPGSP
Trigger: GGGGCTGCCTGGGCTAGAGCAGCGAGAAGTGCCCTG...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CCA 90 bp ATGCAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCACCTGGACGCCAGGCTaGATGGAGGGGAGAAGGCGA +
Preference number: 2 (lower is better)
Translates to: MQLIKWQILIQVCLTLKPTWTPG*MEGRRR
Trigger: TCGCCTTCTCCCCTCCATCCAGCCTGGCGTCCAGGT...GGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR TCA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTGGTGGGCTCCAAGGGTaGGACTTTCAGGCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFGGLQG*DFQALG
Trigger: CCCCAGAGCCTGAAAGTCTCACCCTTGGAGCCCACC...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CCA 90 bp GCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATATTGGACCTGGACGCCAGGCTaGATGGAGGGGAGAAGGCGA +
Preference number: 2 (lower is better)
Translates to: ALYIICSLHYKALPTLYWTWTPG*MEGRRR
Trigger: TCGCCTTCTCCCCTCCATCCAGCCTGGCGTCCAGGT...CCAATATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CCA 90 bp ACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGTTCCAGATCGGACCTCCCCAACACTCTGTATCCTaGGTCACATTTGTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: TLYWSWPQFQYVFQIGPPQHSVS*VTFVAE
Trigger: CTCAGCCACAAATGTGACCCAGGATACAGAGTGTTG...GGGAGGTCCGATCTGGAACACATATTGGAATTGGGGCCAACTCCAATATAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR TCA 90 bp CTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATGGTGGGCTCCAAGGGTaGGACTTTCAGGCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: LKPFTLYALYIIRPYPPYGGLQG*DFQALG
Trigger: CCCCAGAGCCTGAAAGTCTCACCCTTGGAGCCCACC...ATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR TCA 90 bp ATGCAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCCAGATCGGACCTCCCTaGGGACAGCAACACTCTGTA +
Preference number: 2 (lower is better)
Translates to: MQLIKWQILIQVCLTLKPQIGPP*GQQHSV
Trigger: TACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTG...GGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CCA 90 bp CTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATCTGAACAGGGCAACCTaGACGCCAGGCTGGATGGAG +
Preference number: 2 (lower is better)
Translates to: LKPFTLYALYIIRPYPPYLNRAT*TPGWME
Trigger: CTCCATCCAGCCTGGCGTCCAGGTTGCCCTGTTCAG...ATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CCA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTCTTTGGCAGGTTCACTaGGTGTGGGGCACCGAGTGT +
Preference number: 2 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFLWQVH*VWGTEC
Trigger: ACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAG...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CCA 90 bp CTCACTCTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCAGAGACTTTCAGGCTCTaGGGCAGTCAGCGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: LTLKPFTLYALYIIRPYPETFRL*GSQREE
Trigger: CTCCTCCCGCTGACTGCCCCAGAGCCTGAAAGTCTC...TGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAGAGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CCA 90 bp ATGCAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCCCTGGGTCACATTTGTaGCTGAGGCACGCCCTTAAT +
Preference number: 2 (lower is better)
Translates to: MQLIKWQILIQVCLTLKPPGSHL*LRHALN
Trigger: ATTAAGGGCGTGCCTCAGCCACAAATGTGACCCAGG...GGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CCA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTCTCTCACGGTTTCTTTaGCAGGTTCACTGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFLSRFL*QVHWVW
Trigger: CCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAG...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR CCA 72 bp ATCTGTCCCCTGAACAGGGCAACCTGGACGCCAGGCTaGATGGAGGGGAGAAGGCGATGCAGCCGCAATGGT +
Preference number: 3 (lower is better)
Translates to: ICPLNRATWTPG*MEGRRRCSRNG
Trigger: ACCATTGCGGCTGCATCGCCTTCTCCCCTCCATCCAGCCTGGCGTCCAGGTTGCCCTGTTCAGGGGACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR CCA 72 bp ACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTaGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCT +
Preference number: 3 (lower is better)
Translates to: TTQGPEELSRFL*QVHWVWGTECP
Trigger: AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CAA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCGGCGGAGAGGTTAATTaGGGGAATGGACACAAAGAG +
Preference number: 3 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGGGEVN*GNGHKE
Trigger: CTCTTTGTGTCCATTCCCCAAATTAACCTCTCCGCC...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR TCA 72 bp TGTCAGTTCAGCTCAGCGGTGTGGACTCCCAGCTTCTaGGCTGTGGGAATAGAGTCTGCACAACGCAGGGCC +
Preference number: 3 (lower is better)
Translates to: CQFSSAVWTPSF*AVGIESAQRRA
Trigger: GGCCCTGCGTTGTGCAGACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAGCTGAACTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR TCA 72 bp CTGGGGCAGTCAGCGGGAGGAGGTATTTCTGGACAATaGAGACCCCATCAAATCACAGGCTGGTGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: LGQSAGGGISGQ*RPHQITGWWAG
Trigger: CCCTGCCCACCAGCCTGTGATTTGATGGGGTCTTCATTGTCCAGAAATACCTCCTCCCGCTGACTGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR CCA 72 bp TCCAAGGTGGGCTCCAAGGGTGAGACTTTCAGGCTCTaGGGCAGTCAGCGGGAGGAGGTATTTCTGGACAAT +
Preference number: 3 (lower is better)
Translates to: SKVGSKGETFRL*GSQREEVFLDN
Trigger: ATTGTCCAGAAATACCTCCTCCCGCTGACTGCCCCAGAGCCTGAAAGTCTCACCCTTGGAGCCCACCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR CCA 72 bp GAGGACAGCAACACTCTGTATCCTGGGTCACATTTGTaGCTGAGGCACGCCCTTAATTCCAAGGTGGGCTCC +
Preference number: 3 (lower is better)
Translates to: EDSNTLYPGSHL*LRHALNSKVGS
Trigger: GGAGCCCACCTTGGAATTAAGGGCGTGCCTCAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR TCA 72 bp ACAGCAACACTCTGTATCCTGGGTCACATTTGTGGCTaGGGCACGCCCTTAATTCCAAGGTGGGCTCCAAGG +
Preference number: 3 (lower is better)
Translates to: TATLCILGHICG*GTPLIPRWAPR
Trigger: CCTTGGAGCCCACCTTGGAATTAAGGGCGTGCCTCAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CAA 90 bp TCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTTGTGGCTGGGCGGAGAGGTTAATTaGGGGAATGGACACAAAGAG +
Preference number: 3 (lower is better)
Translates to: SDLPEDSNTLYPGSHLWLGGEVN*GNGHKE
Trigger: CTCTTTGTGTCCATTCCCCAAATTAACCTCTCCGCC...CAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR TCA 72 bp CAGAGCAGTTCAGACATTGAGAGGAGAAGCTGGCTCTaGGGAAGATTTATTTGCTCTGAGGCTCTGCATCCC +
Preference number: 3 (lower is better)
Translates to: QSSSDIERRSWL*GRFICSEALHP
Trigger: GGGATGCAGAGCCTCAGAGCAAATAAATCTTCCTCAGAGCCAGCTTCTCCTCTCAATGTCTGAACTGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR TCA 72 bp AGCCTCAGGAATGCCCAGCCAGAGCAGTTCAGACATTaGGAGGAGAAGCTGGCTCTGAGGAAGATTTATTTG +
Preference number: 3 (lower is better)
Translates to: SLRNAQPEQFRH*EEKLALRKIYL
Trigger: CAAATAAATCTTCCTCAGAGCCAGCTTCTCCTCTCAATGTCTGAACTGCTCTGGCTGGGCATTCCTGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CAA 90 bp ATGCAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCAGTCCTCCCCACAGCTaGCATCTGTCCCCTGAACAG +
Preference number: 3 (lower is better)
Translates to: MQLIKWQILIQVCLTLKPSPPHS*HLSPEQ
Trigger: CTGTTCAGGGGACAGATGCAAGCTGTGGGGAGGACT...GGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CAA 90 bp GCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATATTGGAGTCCTCCCCACAGCTaGCATCTGTCCCCTGAACAG +
Preference number: 3 (lower is better)
Translates to: ALYIICSLHYKALPTLYWSPPHS*HLSPEQ
Trigger: CTGTTCAGGGGACAGATGCAAGCTGTGGGGAGGACT...CCAATATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CAA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTGCTCTCACGGTTTCTTaGGCAGGTTCACTGGGTGTG +
Preference number: 3 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFALTVS*AGSLGV
Trigger: CACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGC...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CAA 90 bp GCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATATTGGTATCCTGGGTCACATTaGTGGCTGAGGCACGCCCTT +
Preference number: 3 (lower is better)
Translates to: ALYIICSLHYKALPTLYWYPGSH*WLRHAL
Trigger: AAGGGCGTGCCTCAGCCACAAATGTGACCCAGGATA...CCAATATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR-3UTR CAA 90 bp ATGCAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCCTTACCCACCCTATATaGGAGTTGGCCCCAATTCCA +
Preference number: 3 (lower is better)
Translates to: MQLIKWQILIQVCLTLKPLTHPI*ELAPIP
Trigger: TGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAG...GGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR CCA 72 bp TTACATTATAAGGCCTTACCCACCCTATATTGGAGTTaGCCCCAATTCCAATATGTGTTCCAGATCGGACCT +
Preference number: 3 (lower is better)
Translates to: LHYKALPTLYWS*PQFQYVFQIGP
Trigger: AGGTCCGATCTGGAACACATATTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAGGCCTTATAATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR CCA 72 bp TGCTCTTTACATTATAAGGCCTTACCCACCCTATATTaGAGTTGGCCCCAATTCCAATATGTGTTCCAGATC +
Preference number: 3 (lower is better)
Translates to: CSLHYKALPTLY*SWPQFQYVFQI
Trigger: GATCTGGAACACATATTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp AGCCAGGGCAGAGCTGGTGGCAAGCCCAGGGCACTTCTCGCTGCTCTAGCCCAGTCCTGCCCGCCCGGCTaGCGGGGTTCCTCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: SQGRAGGKPRALLAALAQSCPPG*RGSSRP
Trigger: AGGCCGGGAGGAACCCCGTCAGCCGGGCGGGCAGGA...CTGGGCTAGAGCAGCGAGAAGTGCCCTGGGCTTGCCACCAGCTCTGCCCTGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp AGCCAGGGCAGAGCTGGTGGCAAGCCCAGGGCACTTCTCGCTGCTCTAGCCCAGATCTGCAGCCCTGCCTaGAGCCCGCGGTCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: SQGRAGGKPRALLAALAQICSPA*SPRSRR
Trigger: CCGCCGCGACCGCGGGCTTCAGGCAGGGCTGCAGAT...CTGGGCTAGAGCAGCGAGAAGTGCCCTGGGCTTGCCACCAGCTCTGCCCTGGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260599.10
CDS-3UTR GCA 90 bp AGCCAGGGCAGAGCTGGTGGCAAGCCCAGGGCACTTCTCGCTGCTCTAGCCCAGGAGGAGGCGCACCCCTaGCCCCCACTGGCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SQGRAGGKPRALLAALAQEEAHP*PPLACQ
Trigger: CTGACAGGCCAGTGGGGGGCAGGGGTGCGCCTCCTC...CTGGGCTAGAGCAGCGAGAAGTGCCCTGGGCTTGCCACCAGCTCTGCCCTGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp GTCCTCCCCACAGCTTGCATCTGTCCCCTGAACAGGGCAACCTGGACGCCAGGCCCACGCCCCGCCGCCTaGAGTCGGCCACCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: VLPTACICPLNRATWTPGPRPAA*SRPPGS
Trigger: ACTTCCTGGTGGCCGACTTCAGGCGGCGGGGCGTGG...GCCTGGCGTCCAGGTTGCCCTGTTCAGGGGACAGATGCAAGCTGTGGGGAGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260598.10
CDS-3UTR GCA 90 bp GGCGATGCAGCCGCAATGGTAGTCTCCATGGTGTGTGAGGAGCCGGCACCTGCTGAGGAGGCGCACCCCTaGCCCCCACTGGCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GDAAAMVVSMVCEEPAPAEEAHP*PPLACQ
Trigger: CTGACAGGCCAGTGGGGGGCAGGGGTGCGCCTCCTC...AGCAGGTGCCGGCTCCTCACACACCATGGAGACTACCATTGCGGCTGCATCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GTCCTCCCCACAGCTTGCATCTGTCCCCTGAACAGGGCAACCTGGACGCCAGGCGCACTCTCCTGCACCTaGGTCTCCGACTCCCGACCC +
Preference number: 4 (lower is better)
Translates to: VLPTACICPLNRATWTPGALSCT*VSDSRP
Trigger: GGGTCGGGAGTCGGAGACGCAGGTGCAGGAGAGTGC...GCCTGGCGTCCAGGTTGCCCTGTTCAGGGGACAGATGCAAGCTGTGGGGAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GTCCTCCCCACAGCTTGCATCTGTCCCCTGAACAGGGCAACCTGGACGCCAGGCGCAGGCCACACTTCTTaGCGGCCACCTGGCACCCGA +
Preference number: 4 (lower is better)
Translates to: VLPTACICPLNRATWTPGAGHTS*RPPGTR
Trigger: TCGGGTGCCAGGTGGCCGGCAAGAAGTGTGGCCTGC...GCCTGGCGTCCAGGTTGCCCTGTTCAGGGGACAGATGCAAGCTGTGGGGAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp AGCCAGGGCAGAGCTGGTGGCAAGCCCAGGGCACTTCTCGCTGCTCTAGCCCAGATGGCCAGGAGCCATTaGGCCCATGAAGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SQGRAGGKPRALLAALAQMARSH*AHEGTG
Trigger: CCCTGTGCCTTCATGGGCTCAATGGCTCCTGGCCAT...CTGGGCTAGAGCAGCGAGAAGTGCCCTGGGCTTGCCACCAGCTCTGCCCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GGCGATGCAGCCGCAATGGTAGTCTCCATGGTGTGTGAGGAGCCGGCACCTGCTCAGGGCACTTCTCGCTaGTCTAGCCCAGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GDAAAMVVSMVCEEPAPAQGTSR*SSPGSP
Trigger: GGGGCTGCCTGGGCTAGAGCAGCGAGAAGTGCCCTG...AGCAGGTGCCGGCTCCTCACACACCATGGAGACTACCATTGCGGCTGCATCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp GTCCTCCCCACAGCTTGCATCTGTCCCCTGAACAGGGCAACCTGGACGCCAGGCATCCACCACGCGGGGTaGCGGGAAAGCATCCGAGTG +
Preference number: 4 (lower is better)
Translates to: VLPTACICPLNRATWTPGIHHAG*RESIRV
Trigger: CACTCGGATGCTTTCCCGCCACCCCGCGTGGTGGAT...GCCTGGCGTCCAGGTTGCCCTGTTCAGGGGACAGATGCAAGCTGTGGGGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp GTCCTCCCCACAGCTTGCATCTGTCCCCTGAACAGGGCAACCTGGACGCCAGGCACCTGGACGCCAGGCTaGATGGAGGGGAGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: VLPTACICPLNRATWTPGTWTPG*MEGRRR
Trigger: TCGCCTTCTCCCCTCCATCCAGCCTGGCGTCCAGGT...GCCTGGCGTCCAGGTTGCCCTGTTCAGGGGACAGATGCAAGCTGTGGGGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp AGCCAGGGCAGAGCTGGTGGCAAGCCCAGGGCACTTCTCGCTGCTCTAGCCCAGCCCCTCCTCTGGGCCTaGGCGGAGAGGTTAATTTGG +
Preference number: 4 (lower is better)
Translates to: SQGRAGGKPRALLAALAQPLLWA*AERLIW
Trigger: CCAAATTAACCTCTCCGCCCAGGCCCAGAGGAGGGG...CTGGGCTAGAGCAGCGAGAAGTGCCCTGGGCTTGCCACCAGCTCTGCCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp CAACCTGGACGCCAGGCTGGATGGAGGGGAGAAGGCGATGCAGCCGCAATGGTAGAGCCATTGAGCCCATaGAGGCACAGGGGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: QPGRQAGWRGEGDAAAMVEPLSP*RHRGLR
Trigger: TCGGAGCCCCCTGTGCCTTCATGGGCTCAATGGCTC...TACCATTGCGGCTGCATCGCCTTCTCCCCTCCATCCAGCCTGGCGTCCAGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCGGTGGGCTCCAAGGGTaGGACTTTCAGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGGGLQG*DFQALG
Trigger: CCCCAGAGCCTGAAAGTCTCACCCTTGGAGCCCACC...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp CAACCTGGACGCCAGGCTGGATGGAGGGGAGAAGGCGATGCAGCCGCAATGGTAGGTGGGCTCCAAGGGTaGGACTTTCAGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QPGRQAGWRGEGDAAAMVGGLQG*DFQALG
Trigger: CCCCAGAGCCTGAAAGTCTCACCCTTGGAGCCCACC...TACCATTGCGGCTGCATCGCCTTCTCCCCTCCATCCAGCCTGGCGTCCAGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GTCCTCCCCACAGCTTGCATCTGTCCCCTGAACAGGGCAACCTGGACGCCAGGCGACACCCGGATCTTCTaGTCTGGAGGCTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VLPTACICPLNRATWTPGDTRIF*SGGCLV
Trigger: CACCAGGCAGCCTCCAGAGCAGAAGATCCGGGTGTC...GCCTGGCGTCCAGGTTGCCCTGTTCAGGGGACAGATGCAAGCTGTGGGGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GAGTCTGCACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCTCGCATCTGCAGCCCTaGCTGAAGCCCGCGGTCGCG +
Preference number: 4 (lower is better)
Translates to: ESAQRRAPKSSHGFFGRFSHLQP*LKPAVA
Trigger: CGCGACCGCGGGCTTCAGGCAGGGCTGCAGATGCGA...GAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260599.10
CDS-3UTR CCA 90 bp GGCGATGCAGCCGCAATGGTAGTCTCCATGGTGTGTGAGGAGCCGGCACCTGCTCAGGTTCACTGGGTGTaGGGCACCGAGTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GDAAAMVVSMVCEEPAPAQVHWV*GTECPP
Trigger: GGGAGGACACTCGGTGCCCCACACCCAGTGAACCTG...AGCAGGTGCCGGCTCCTCACACACCATGGAGACTACCATTGCGGCTGCATCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp AGCCAGGGCAGAGCTGGTGGCAAGCCCAGGGCACTTCTCGCTGCTCTAGCCCAGCTTTGGCAGGTTCACTaGGTGTGGGGCACCGAGTGT +
Preference number: 4 (lower is better)
Translates to: SQGRAGGKPRALLAALAQLWQVH*VWGTEC
Trigger: ACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAG...CTGGGCTAGAGCAGCGAGAAGTGCCCTGGGCTTGCCACCAGCTCTGCCCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GGCGATGCAGCCGCAATGGTAGTCTCCATGGTGTGTGAGGAGCCGGCACCTGCTGCAGGGAGAGAACGGTaGAGGAGTTGGACGCGTTGC +
Preference number: 4 (lower is better)
Translates to: GDAAAMVVSMVCEEPAPAAGRER*RSWTRC
Trigger: GCAACGCGTCCAACTCCTGCACCGTTCTCTCCCTGC...AGCAGGTGCCGGCTCCTCACACACCATGGAGACTACCATTGCGGCTGCATCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCGCACCCGAATCTCAGTaGTTCCTGCACGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGAPESQ*FLHAPP
Trigger: GGGAGGAGCGTGCAGGAAGCACTGAGATTCGGGTGC...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp AGCCAGGGCAGAGCTGGTGGCAAGCCCAGGGCACTTCTCGCTGCTCTAGCCCAGCCGCGCTGCCATCTCTaGGACAAACACCTTATCTCC +
Preference number: 4 (lower is better)
Translates to: SQGRAGGKPRALLAALAQPRCHL*DKHLIS
Trigger: GGAGATAAGGTGTTTGTCCCAGAGATGGCAGCGCGG...CTGGGCTAGAGCAGCGAGAAGTGCCCTGGGCTTGCCACCAGCTCTGCCCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CAACCTGGACGCCAGGCTGGATGGAGGGGAGAAGGCGATGCAGCCGCAATGGTACTGAACAGGGCAACCTaGACGCCAGGCTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: QPGRQAGWRGEGDAAAMVLNRAT*TPGWME
Trigger: CTCCATCCAGCCTGGCGTCCAGGTTGCCCTGTTCAG...TACCATTGCGGCTGCATCGCCTTCTCCCCTCCATCCAGCCTGGCGTCCAGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCCAGAGCCTCTCCCTGTaGGGAACACAGGACACAGGC +
Preference number: 4 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGQSLSL*GTQDTG
Trigger: GCCTGTGTCCTGTGTTCCCCACAGGGAGAGGCTCTG...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTGTCCCCGCTCCCAGCTaGCCTGGCTCCTCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: ICVPDRTSLRTATLCILGVPAPS*PGSSSA
Trigger: CGCGGAGGAGGAGCCAGGGCAGCTGGGAGCGGGGAC...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CAACCTGGACGCCAGGCTGGATGGAGGGGAGAAGGCGATGCAGCCGCAATGGTACTTCACCTGCTCCGATaGGTTCCGGCCCTCAATGTG +
Preference number: 4 (lower is better)
Translates to: QPGRQAGWRGEGDAAAMVLHLLR*VPALNV
Trigger: CACATTGAGGGCCGGAACGCATCGGAGCAGGTGAAG...TACCATTGCGGCTGCATCGCCTTCTCCCCTCCATCCAGCCTGGCGTCCAGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GGCGATGCAGCCGCAATGGTAGTCTCCATGGTGTGTGAGGAGCCGGCACCTGCTAATCTCAGTGCTTCCTaGACGCTCCTCCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GDAAAMVVSMVCEEPAPANLSAS*TLLPWE
Trigger: CTCCCAGGGGAGGAGCGTGCAGGAAGCACTGAGATT...AGCAGGTGCCGGCTCCTCACACACCATGGAGACTACCATTGCGGCTGCATCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp AGCCAGGGCAGAGCTGGTGGCAAGCCCAGGGCACTTCTCGCTGCTCTAGCCCAGCATAGTATAGGATGGTaGGGCTACCACTGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: SQGRAGGKPRALLAALAQHSIGW*GYHWPR
Trigger: ACGAGGCCAGTGGTAGCCGCACCATCCTATACTATG...CTGGGCTAGAGCAGCGAGAAGTGCCCTGGGCTTGCCACCAGCTCTGCCCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260599.10
CDS-3UTR CCA 90 bp GAGTCTGCACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCGCCTGGGCCTGCAGATaGCAACGCCTCCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: ESAQRRAPKSSHGFFGRFAWACR*QRLPLL
Trigger: GAGAAGTGGGAGGCGTTGCCATCTGCAGGCCCAGGC...GAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CAACCTGGACGCCAGGCTGGATGGAGGGGAGAAGGCGATGCAGCCGCAATGGTATCTTATCCAGGAGGATaGTGTCCCCGCTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QPGRQAGWRGEGDAAAMVSYPGG*CPRSQL
Trigger: CAGCTGGGAGCGGGGACACCATCCTCCTGGATAAGA...TACCATTGCGGCTGCATCGCCTTCTCCCCTCCATCCAGCCTGGCGTCCAGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCGCTCTGGAGGCTGCCTaGTGTTGTGTGCGTCTATCC +
Preference number: 4 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGALEAA*CCVRLS
Trigger: GGATAGACGCACACAACACCAGGCAGCCTCCAGAGC...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTACCTGGACGCCAGGCTaGATGGAGGGGAGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPTWTPG*MEGRRR
Trigger: TCGCCTTCTCCCCTCCATCCAGCCTGGCGTCCAGGT...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CAACCTGGACGCCAGGCTGGATGGAGGGGAGAAGGCGATGCAGCCGCAATGGTACTTTGGCAGGTTCACTaGGTGTGGGGCACCGAGTGT +
Preference number: 4 (lower is better)
Translates to: QPGRQAGWRGEGDAAAMVLWQVH*VWGTEC
Trigger: ACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAG...TACCATTGCGGCTGCATCGCCTTCTCCCCTCCATCCAGCCTGGCGTCCAGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCCAAGGCTTCCTCTGCTaGCTGGAACCCCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGQGFLC*LEPQVL
Trigger: AAGCACTTGGGGTTCCAGTCAGCAGAGGAAGCCTTG...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCAGAAAATGCGCTACTTaGCCCGCACTCTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGRKCAT*PALSCT
Trigger: GGTGCAGGAGAGTGCGGGGCAAGTAGCGCATTTTCT...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTCTTCCCGTAGCAGGTTaGCTGGGCCTGCAGATGGCA +
Preference number: 4 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPLPVAG*LGLQMA
Trigger: TGCCATCTGCAGGCCCAGGCAACCTGCTACGGGAAG...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp ACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGTTCCAGATCGGACCTCCCGTCCCCGCTCCCAGCTaGCCTGGCTCCTCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: TLYWSWPQFQYVFQIGPPVPAPS*PGSSSA
Trigger: CGCGGAGGAGGAGCCAGGGCAGCTGGGAGCGGGGAC...GGGAGGTCCGATCTGGAACACATATTGGAATTGGGGCCAACTCCAATATAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTGCGTTGCCTCCGCGCTaGCATCTCTGGGACAAACAC +
Preference number: 4 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPALPPR*HLWDKH
Trigger: GTGTTTGTCCCAGAGATGGCAGCGCGGAGGCAACGC...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GAGTCTGCACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCAGGAGTTGGACGCGTTaGCTCCGCGCTGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: ESAQRRAPKSSHGFFGRFRSWTR*LRAAIS
Trigger: AGAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCT...GAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp TCAGTTCAGCTCAGCGGTGTGGACTCCCAGCTTCTGAGCTGTGGGAATAGAGTCTGGGGGTGTCCCCCTTaGTCTGCCAGGCCACCTGAG +
Preference number: 4 (lower is better)
Translates to: SVQLSGVDSQLLSCGNRVWGCPP*SARPPE
Trigger: CTCAGGTGGCCTGGCAGAGCAAGGGGGACACCCCCA...GACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAGCTGAACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260598.10
CDS-3UTR GCA 90 bp TCAGTTCAGCTCAGCGGTGTGGACTCCCAGCTTCTGAGCTGTGGGAATAGAGTCGCAGGCCACACTTCTTaGCGGCCACCTGGCACCCGA +
Preference number: 4 (lower is better)
Translates to: SVQLSGVDSQLLSCGNRVAGHTS*RPPGTR
Trigger: TCGGGTGCCAGGTGGCCGGCAAGAAGTGTGGCCTGC...GACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAGCTGAACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GGCGATGCAGCCGCAATGGTAGTCTCCATGGTGTGTGAGGAGCCGGCACCTGCTATGCCATCAAAGCCCTaGAGGCCACACTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: GDAAAMVVSMVCEEPAPAMPSKP*RPHFLP
Trigger: CGGCAAGAAGTGTGGCCTGCAGGGCTTTGATGGCAT...AGCAGGTGCCGGCTCCTCACACACCATGGAGACTACCATTGCGGCTGCATCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCTGTGGGAATAGAGTCTaGACAACGCAGGGCCCCGAA +
Preference number: 4 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGCGNRV*TTQGPE
Trigger: TTCGGGGCCCTGCGTTGTGCAGACTCTATTCCCACA...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCCCGCGCTGCCATCTCTaGGACAAACACCTTATCTCC +
Preference number: 4 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGPRCHL*DKHLIS
Trigger: GGAGATAAGGTGTTTGTCCCAGAGATGGCAGCGCGG...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp GGCGATGCAGCCGCAATGGTAGTCTCCATGGTGTGTGAGGAGCCGGCACCTGCTAGGAAGTCAGCAACATaGCCAGGAGCCATTGAGCCC +
Preference number: 4 (lower is better)
Translates to: GDAAAMVVSMVCEEPAPARKSAT*PGAIEP
Trigger: GGGCTCAATGGCTCCTGGCCATGTTGCTGACTTCCT...AGCAGGTGCCGGCTCCTCACACACCATGGAGACTACCATTGCGGCTGCATCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260598.10
CDS-3UTR CCA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCGGCAGGCTCGTGTCATaGAGCACAATGGTACGGTTG +
Preference number: 4 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGGRLVS*STMVRL
Trigger: CAACCGTACCATTGTGCTCCATGACACGAGCCTGCC...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260598.10
CDS-3UTR CCA 90 bp GAGTCTGCACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCCTGAACAGGGCAACCTaGACGCCAGGCTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: ESAQRRAPKSSHGFFGRFLNRAT*TPGWME
Trigger: CTCCATCCAGCCTGGCGTCCAGGTTGCCCTGTTCAG...GAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTGAGACTTTCAGGCTCTaGGGCAGTCAGCGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPETFRL*GSQREE
Trigger: CTCCTCCCGCTGACTGCCCCAGAGCCTGAAAGTCTC...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCGAGCAGTTCAGACATTaGGAGGAGAAGCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGEQFRH*EEKLAL
Trigger: CAGAGCCAGCTTCTCCTCTCAATGTCTGAACTGCTC...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp TCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTTGTGGCTGCAGGTTGCCTGGGCCTaGAGATGGCAACGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SDLPEDSNTLYPGSHLWLQVAWA*RWQRLP
Trigger: TGGGAGGCGTTGCCATCTGCAGGCCCAGGCAACCTG...CAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp TCAGTTCAGCTCAGCGGTGTGGACTCCCAGCTTCTGAGCTGTGGGAATAGAGTCCAGGTTGCCTGGGCCTaGAGATGGCAACGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SVQLSGVDSQLLSCGNRVQVAWA*RWQRLP
Trigger: TGGGAGGCGTTGCCATCTGCAGGCCCAGGCAACCTG...GACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAGCTGAACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp TCAGTTCAGCTCAGCGGTGTGGACTCCCAGCTTCTGAGCTGTGGGAATAGAGTCTGCAGCGGCCAGGGGTaGAGGGAACGAAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SVQLSGVDSQLLSCGNRVCSGQG*RERKEQ
Trigger: CTGCTCCTTTCGTTCCCTGCACCCCTGGCCGCTGCA...GACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAGCTGAACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GAGTCTGCACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCCCTGCTCTCACACGATaGCATCAAAGCCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ESAQRRAPKSSHGFFGRFPALTR*HQSPAG
Trigger: GCCTGCAGGGCTTTGATGGCATCGTGTGAGAGCAGG...GAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp TCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTTGTGGCTGGAACGGTGCAGGAGTTaGACGCGTTGCCTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: SDLPEDSNTLYPGSHLWLERCRS*TRCLRA
Trigger: AGCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTC...CAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp TCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTTGTGGCTGATCCACCACGCGGGGTaGCGGGAAAGCATCCGAGTG +
Preference number: 4 (lower is better)
Translates to: SDLPEDSNTLYPGSHLWLIHHAG*RESIRV
Trigger: CACTCGGATGCTTTCCCGCCACCCCGCGTGGTGGAT...CAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp GAGTCTGCACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCTTCTTGCCGGCCACCTaGCACCCGAATCTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: ESAQRRAPKSSHGFFGRFFLPAT*HPNLSA
Trigger: AGCACTGAGATTCGGGTGCCAGGTGGCCGGCAAGAA...GAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp TCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTTGTGGCTGAGTCTCCATGGTGTGTaGGGAGCCGGCACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SDLPEDSNTLYPGSHLWLSLHGV*GAGTCS
Trigger: AGAGCAGGTGCCGGCTCCTCACACACCATGGAGACT...CAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp GGCGATGCAGCCGCAATGGTAGTCTCCATGGTGTGTGAGGAGCCGGCACCTGCTAAGATTTATTTGCTCTaGGGCTCTGCATCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GDAAAMVVSMVCEEPAPAKIYLL*GSASPS
Trigger: GCTGGGGGATGCAGAGCCTCAGAGCAAATAAATCTT...AGCAGGTGCCGGCTCCTCACACACCATGGAGACTACCATTGCGGCTGCATCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTGCACTCTCCTGCACCTaGGTCTCCGACTCCCGACCC +
Preference number: 4 (lower is better)
Translates to: ICVPDRTSLRTATLCILGALSCT*VSDSRP
Trigger: GGGTCGGGAGTCGGAGACGCAGGTGCAGGAGAGTGC...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTAGAAAATGCGCTACTTaGCCCGCACTCTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPRKCAT*PALSCT
Trigger: GGTGCAGGAGAGTGCGGGGCAAGTAGCGCATTTTCT...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTTTCTGCTCTGGAGGCTaGCTGGTGTTGTGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPFCSGG*LVLCAS
Trigger: AGACGCACACAACACCAGGCAGCCTCCAGAGCAGAA...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp TCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTTGTGGCTGCCGAGTGGAGCAATTTaGCATCAGGGCCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: SDLPEDSNTLYPGSHLWLPSGAI*HQGPGR
Trigger: ACGCCCTGGGCCCTGATGGCAAATTGCTCCACTCGG...CAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp TCAGTTCAGCTCAGCGGTGTGGACTCCCAGCTTCTGAGCTGTGGGAATAGAGTCGCACCCGAATCTCAGTaGTTCCTGCACGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SVQLSGVDSQLLSCGNRVAPESQ*FLHAPP
Trigger: GGGAGGAGCGTGCAGGAAGCACTGAGATTCGGGTGC...GACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAGCTGAACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTTCAGAGCCTCAGGAATaGCCAGCCAGAGCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPSEPQE*PARAVQ
Trigger: CTGAACTGCTCTGGCTGGGCATTCCTGAGGCTCTGA...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTTGTGGGAATAGAGTCTaGACAACGCAGGGCCCCGAA +
Preference number: 4 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPCGNRV*TTQGPE
Trigger: TTCGGGGCCCTGCGTTGTGCAGACTCTATTCCCACA...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp TCAGTTCAGCTCAGCGGTGTGGACTCCCAGCTTCTGAGCTGTGGGAATAGAGTCCAGAGCCTCTCCCTGTaGGGAACACAGGACACAGGC +
Preference number: 4 (lower is better)
Translates to: SVQLSGVDSQLLSCGNRVQSLSL*GTQDTG
Trigger: GCCTGTGTCCTGTGTTCCCCACAGGGAGAGGCTCTG...GACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAGCTGAACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp GAGTCTGCACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCTCTGCTTCTCTTCCATaGGGCTACTCCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ESAQRRAPKSSHGFFGRFSASLP*GYSQSF
Trigger: GAAGCTCTGGGAGTAGCCTCATGGAAGAGAAGCAGA...GAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCCAATGTGGATCCACTTaGACTGGGTCAGATCAACCT +
Preference number: 4 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGQCGST*TGSDQP
Trigger: AGGTTGATCTGACCCAGTTCAAGTGGATCCACATTG...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTGAGCAGTTCAGACATTaGGAGGAGAAGCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPEQFRH*EEKLAL
Trigger: CAGAGCCAGCTTCTCCTCTCAATGTCTGAACTGCTC...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTCCCACGCACAGGATCTaGTTCTCTTCCATGAGGCTA +
Preference number: 4 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPPTHRI*FSSMRL
Trigger: TAGCCTCATGGAAGAGAAGCAGATCCTGTGCGTGGG...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CAACCTGGACGCCAGGCTGGATGGAGGGGAGAAGGCGATGCAGCCGCAATGGTATGTCATGGAGCACAATaGTACGGTTGCCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: QPGRQAGWRGEGDAAAMVCHGAQ*YGCHWS
Trigger: ACTCCAATGGCAACCGTACCATTGTGCTCCATGACA...TACCATTGCGGCTGCATCGCCTTCTCCCCTCCATCCAGCCTGGCGTCCAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260598.10
CDS-3UTR CCA 90 bp TCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTTGTGGCTGGCTCTGGAGGCTGCCTaGTGTTGTGTGCGTCTATCC +
Preference number: 4 (lower is better)
Translates to: SDLPEDSNTLYPGSHLWLALEAA*CCVRLS
Trigger: GGATAGACGCACACAACACCAGGCAGCCTCCAGAGC...CAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp TCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTTGTGGCTGGCTTCCTCTGCTGACTaGAACCCCAAGTGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SDLPEDSNTLYPGSHLWLASSAD*NPKCLA
Trigger: GGCCAAGCACTTGGGGTTCCAGTCAGCAGAGGAAGC...CAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp GAGTCTGCACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCGGGAAAGCATCCGAGTaGAGCAATTTGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: ESAQRRAPKSSHGFFGRFGKASE*SNLPSG
Trigger: CCCTGATGGCAAATTGCTCCACTCGGATGCTTTCCC...GAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp ACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGTTCCAGATCGGACCTCCCAGGCAGCCCCTCCTCTaGGCCTGGGCGGAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: TLYWSWPQFQYVFQIGPPRQPLL*AWAERL
Trigger: TAACCTCTCCGCCCAGGCCCAGAGGAGGGGCTGCCT...GGGAGGTCCGATCTGGAACACATATTGGAATTGGGGCCAACTCCAATATAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCCAACACTCTGTATCCTaGGTCACATTTGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGQHSVS*VTFVAE
Trigger: CTCAGCCACAAATGTGACCCAGGATACAGAGTGTTG...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CATTATAAGGCCTTACCCACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGCTCCAGGGAGCCACCTaGAGCGGCCAGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: HYKALPTLYWSWPQFQYVLQGAT*SGQGCR
Trigger: CCTGCACCCCTGGCCGCTGCAGGTGGCTCCCTGGAG...CACATATTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAGGCCTTATAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTGCAGGGAGAGAACGGTaGAGGAGTTGGACGCGTTGC +
Preference number: 4 (lower is better)
Translates to: ICVPDRTSLRTATLCILGAGRER*RSWTRC
Trigger: GCAACGCGTCCAACTCCTGCACCGTTCTCTCCCTGC...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp TCAGTTCAGCTCAGCGGTGTGGACTCCCAGCTTCTGAGCTGTGGGAATAGAGTCCTGCCTGGTGTTGTGTaGGTCTATCCGCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SVQLSGVDSQLLSCGNRVLPGVV*VYPLQH
Trigger: ATGCTGCAGCGGATAGACGCACACAACACCAGGCAG...GACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAGCTGAACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTGACACCCGGATCTTCTaGTCTGGAGGCTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ICVPDRTSLRTATLCILGDTRIF*SGGCLV
Trigger: CACCAGGCAGCCTCCAGAGCAGAAGATCCGGGTGTC...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTTGCACGCTCCTCCCCTaGGAGAGGCTGAAGATGACG +
Preference number: 4 (lower is better)
Translates to: ICVPDRTSLRTATLCILGCTLLP*ERLKMT
Trigger: CGTCATCTTCAGCCTCTCCCAGGGGAGGAGCGTGCA...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp ACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGTTCCAGATCGGACCTCCCCAGGTTCACTGGGTGTaGGGCACCGAGTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TLYWSWPQFQYVFQIGPPQVHWV*GTECPP
Trigger: GGGAGGACACTCGGTGCCCCACACCCAGTGAACCTG...GGGAGGTCCGATCTGGAACACATATTGGAATTGGGGCCAACTCCAATATAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
3UTR CAA 72 bp CCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTaGTGGCTGAGGCACGCCCTTAATTCCAAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PEDSNTLYPGSH*WLRHALNSKVG
Trigger: GCCCACCTTGGAATTAAGGGCGTGCCTCAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp TCAGTTCAGCTCAGCGGTGTGGACTCCCAGCTTCTGAGCTGTGGGAATAGAGTCGGTCACATTTGTGGCTaGGGCACGCCCTTAATTCCA +
Preference number: 4 (lower is better)
Translates to: SVQLSGVDSQLLSCGNRVGHICG*GTPLIP
Trigger: TGGAATTAAGGGCGTGCCTCAGCCACAAATGTGACC...GACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAGCTGAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTGAGGGGAGAAGGCGATaGAGCCGCAATGGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: ICVPDRTSLRTATLCILGEGRRR*SRNGSL
Trigger: GAGACTACCATTGCGGCTGCATCGCCTTCTCCCCTC...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp TCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTTGTGGCTGTTCCGGCCCTCAATGTaGATCCACTTGAACTGGGTC +
Preference number: 4 (lower is better)
Translates to: SDLPEDSNTLYPGSHLWLFRPSM*IHLNWV
Trigger: GACCCAGTTCAAGTGGATCCACATTGAGGGCCGGAA...CAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTTTCTTGCCGGCCACCTaGCACCCGAATCTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: ICVPDRTSLRTATLCILGFLPAT*HPNLSA
Trigger: AGCACTGAGATTCGGGTGCCAGGTGGCCGGCAAGAA...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp TCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTTGTGGCTGCTCTCACGGTTTCTTTaGCAGGTTCACTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SDLPEDSNTLYPGSHLWLLSRFL*QVHWVW
Trigger: CCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAG...CAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp TCAGTTCAGCTCAGCGGTGTGGACTCCCAGCTTCTGAGCTGTGGGAATAGAGTCCCTGGGTCACATTTGTaGCTGAGGCACGCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: SVQLSGVDSQLLSCGNRVPGSHL*LRHALN
Trigger: ATTAAGGGCGTGCCTCAGCCACAAATGTGACCCAGG...GACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAGCTGAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp CTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATTCCTGCCCGCCCGGCTaGCGGGGTTCCTCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: LKPFTLYALYIIRPYPPYSCPPG*RGSSRP
Trigger: AGGCCGGGAGGAACCCCGTCAGCCGGGCGGGCAGGA...ATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp ATGCAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCCTCCAGGGAGCCACCTaGAGCGGCCAGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: MQLIKWQILIQVCLTLKPLQGAT*SGQGCR
Trigger: CCTGCACCCCTGGCCGCTGCAGGTGGCTCCCTGGAG...GGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTTCAGAGCCTCAGGAATaGCCAGCCAGAGCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: ICVPDRTSLRTATLCILGSEPQE*PARAVQ
Trigger: CTGAACTGCTCTGGCTGGGCATTCCTGAGGCTCTGA...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CATTATAAGGCCTTACCCACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGCAGGGCACTTCTCGCTaGTCTAGCCCAGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: HYKALPTLYWSWPQFQYVQGTSR*SSPGSP
Trigger: GGGGCTGCCTGGGCTAGAGCAGCGAGAAGTGCCCTG...CACATATTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAGGCCTTATAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp GAGTCTGCACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCTGGATCCACTTGAACTaGGTCAGATCAACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ESAQRRAPKSSHGFFGRFWIHLN*VRSTFS
Trigger: TGAGAAGGTTGATCTGACCCAGTTCAAGTGGATCCA...GAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTTTACCCACCCTATATTaGAGTTGGCCCCAATTCCAA +
Preference number: 4 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPLPTLY*SWPQFQ
Trigger: TTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAA...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp GAGTCTGCACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCTTACCCACCCTATATTaGAGTTGGCCCCAATTCCAA +
Preference number: 4 (lower is better)
Translates to: ESAQRRAPKSSHGFFGRFLPTLY*SWPQFQ
Trigger: TTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAA...GAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCGTAGCCAAGCAGAATTaGTTCCATTTGACAGATGAA +
Preference number: 4 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGVAKQN*FHLTDE
Trigger: TTCATCTGTCAAATGGAACCAATTCTGCTTGGCTAC...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp GAGTCTGCACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCGGTATTTCTGGACAATaGAGACCCCATCAAATCACA +
Preference number: 4 (lower is better)
Translates to: ESAQRRAPKSSHGFFGRFGISGQ*RPHQIT
Trigger: TGTGATTTGATGGGGTCTTCATTGTCCAGAAATACC...GAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTGGTCACATTTGTGGCTaGGGCACGCCCTTAATTCCA +
Preference number: 4 (lower is better)
Translates to: ICVPDRTSLRTATLCILGGHICG*GTPLIP
Trigger: TGGAATTAAGGGCGTGCCTCAGCCACAAATGTGACC...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTAAGCGATCTCGAGAATaGAAAGAGAAAATGCGCTAC +
Preference number: 4 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPKRSRE*KEKMRY
Trigger: GTAGCGCATTTTCTCTTTGCATTCTCGAGATCGCTT...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CATTATAAGGCCTTACCCACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGTGCAGCGGCCAGGGGTaGAGGGAACGAAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: HYKALPTLYWSWPQFQYVCSGQG*RERKEQ
Trigger: CTGCTCCTTTCGTTCCCTGCACCCCTGGCCGCTGCA...CACATATTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAGGCCTTATAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTTTCCGGCCCTCAATGTaGATCCACTTGAACTGGGTC +
Preference number: 4 (lower is better)
Translates to: ICVPDRTSLRTATLCILGFRPSM*IHLNWV
Trigger: GACCCAGTTCAAGTGGATCCACATTGAGGGCCGGAA...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp TCAGTTCAGCTCAGCGGTGTGGACTCCCAGCTTCTGAGCTGTGGGAATAGAGTCCAACACTCTGTATCCTaGGTCACATTTGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SVQLSGVDSQLLSCGNRVQHSVS*VTFVAE
Trigger: CTCAGCCACAAATGTGACCCAGGATACAGAGTGTTG...GACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAGCTGAACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTACCCTATATTGGAGTTaGCCCCAATTCCAATATGTG +
Preference number: 4 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPTLYWS*PQFQYV
Trigger: CACATATTGGAATTGGGGCCAACTCCAATATAGGGT...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp ACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGTTCCAGATCGGACCTCCCTCTGCTTCTCTTCCATaGGGCTACTCCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: TLYWSWPQFQYVFQIGPPSASLP*GYSQSF
Trigger: GAAGCTCTGGGAGTAGCCTCATGGAAGAGAAGCAGA...GGGAGGTCCGATCTGGAACACATATTGGAATTGGGGCCAACTCCAATATAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp CATTATAAGGCCTTACCCACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGATGGCCAGGAGCCATTaGGCCCATGAAGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: HYKALPTLYWSWPQFQYVMARSH*AHEGTG
Trigger: CCCTGTGCCTTCATGGGCTCAATGGCTCCTGGCCAT...CACATATTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAGGCCTTATAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CATTATAAGGCCTTACCCACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGTTTGCTCTGAGGCTCTaGATCCCCCAGCCATCCCCC +
Preference number: 4 (lower is better)
Translates to: HYKALPTLYWSWPQFQYVFALRL*IPQPSP
Trigger: GGGGGATGGCTGGGGGATGCAGAGCCTCAGAGCAAA...CACATATTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAGGCCTTATAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp ACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGTTCCAGATCGGACCTCCCGGGAAAGCATCCGAGTaGAGCAATTTGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: TLYWSWPQFQYVFQIGPPGKASE*SNLPSG
Trigger: CCCTGATGGCAAATTGCTCCACTCGGATGCTTTCCC...GGGAGGTCCGATCTGGAACACATATTGGAATTGGGGCCAACTCCAATATAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp ATGCAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCAGGCAGCCCCTCCTCTaGGCCTGGGCGGAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: MQLIKWQILIQVCLTLKPRQPLL*AWAERL
Trigger: TAACCTCTCCGCCCAGGCCCAGAGGAGGGGCTGCCT...GGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp TCAGTTCAGCTCAGCGGTGTGGACTCCCAGCTTCTGAGCTGTGGGAATAGAGTCGAAATTGAGGCAGATTaGGTTAAGTGCTGTACCCTA +
Preference number: 4 (lower is better)
Translates to: SVQLSGVDSQLLSCGNRVEIEAD*VKCCTL
Trigger: TAGGGTACAGCACTTAACGCAATCTGCCTCAATTTC...GACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAGCTGAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTCACGCGAGGTACAGCTaGGCCTCGCATCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFHARYS*ASHLQP
Trigger: GGGCTGCAGATGCGAGGCCCAGCTGTACCTCGCGTG...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTTGTAGCAGACACATCTaGCAGGCTCCTGTCATAGTA +
Preference number: 4 (lower is better)
Translates to: ICVPDRTSLRTATLCILGCSRHI*QAPVIV
Trigger: TACTATGACAGGAGCCTGCCAGATGTGTCTGCTACA...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260599.10
CDS-3UTR GCA 90 bp CATTATAAGGCCTTACCCACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGTGTGCGTCTATCCGCTaGAGCATCTTCACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HYKALPTLYWSWPQFQYVCASIR*SIFTCS
Trigger: GGAGCAGGTGAAGATGCTGCAGCGGATAGACGCACA...CACATATTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAGGCCTTATAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CATTATAAGGCCTTACCCACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGCTGCCTGGTGTTGTGTaGGTCTATCCGCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: HYKALPTLYWSWPQFQYVLPGVV*VYPLQH
Trigger: ATGCTGCAGCGGATAGACGCACACAACACCAGGCAG...CACATATTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAGGCCTTATAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CATTATAAGGCCTTACCCACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGTTCTGCTCTGGAGGCTaGCTGGTGTTGTGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: HYKALPTLYWSWPQFQYVFCSGG*LVLCAS
Trigger: AGACGCACACAACACCAGGCAGCCTCCAGAGCAGAA...CACATATTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAGGCCTTATAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATCACGCGAGGTACAGCTaGGCCTCGCATCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LKPFTLYALYIIRPYPPYHARYS*ASHLQP
Trigger: GGGCTGCAGATGCGAGGCCCAGCTGTACCTCGCGTG...ATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTGCCTGGGCCTGCAGATaGCAACGCCTCCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFAWACR*QRLPLL
Trigger: GAGAAGTGGGAGGCGTTGCCATCTGCAGGCCCAGGC...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTGAACGGTGCAGGAGTTaGACGCGTTGCCTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFERCRS*TRCLRA
Trigger: AGCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTC...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp GCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATATTGGAGTCTCCATGGTGTGTaGGGAGCCGGCACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ALYIICSLHYKALPTLYWSLHGV*GAGTCS
Trigger: AGAGCAGGTGCCGGCTCCTCACACACCATGGAGACT...CCAATATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTTGCAGCATCTTCACCTaGTCCGATGCGTTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFCSIFT*SDAFRP
Trigger: GGGCCGGAACGCATCGGAGCAGGTGAAGATGCTGCA...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTCCGAGTGGAGCAATTTaGCATCAGGGCCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFPSGAI*HQGPGR
Trigger: ACGCCCTGGGCCCTGATGGCAAATTGCTCCACTCGG...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp GCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATATTGGTGCACGCTCCTCCCCTaGGAGAGGCTGAAGATGACG +
Preference number: 4 (lower is better)
Translates to: ALYIICSLHYKALPTLYWCTLLP*ERLKMT
Trigger: CGTCATCTTCAGCCTCTCCCAGGGGAGGAGCGTGCA...CCAATATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp CATTATAAGGCCTTACCCACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGAAGATTTATTTGCTCTaGGGCTCTGCATCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: HYKALPTLYWSWPQFQYVKIYLL*GSASPS
Trigger: GCTGGGGGATGCAGAGCCTCAGAGCAAATAAATCTT...CACATATTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAGGCCTTATAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATGCGTTGCCTCCGCGCTaGCATCTCTGGGACAAACAC +
Preference number: 4 (lower is better)
Translates to: LKPFTLYALYIIRPYPPYALPPR*HLWDKH
Trigger: GTGTTTGTCCCAGAGATGGCAGCGCGGAGGCAACGC...ATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CTCACTCTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCATGCAGCATCTTCACCTaGTCCGATGCGTTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: LTLKPFTLYALYIIRPYPCSIFT*SDAFRP
Trigger: GGGCCGGAACGCATCGGAGCAGGTGAAGATGCTGCA...TGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAGAGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp ATGCAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCATGCCATCAAAGCCCTaGAGGCCACACTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: MQLIKWQILIQVCLTLKPMPSKP*RPHFLP
Trigger: CGGCAAGAAGTGTGGCCTGCAGGGCTTTGATGGCAT...GGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATATTGGGAGGGGAGAAGGCGATaGAGCCGCAATGGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: ALYIICSLHYKALPTLYWEGRRR*SRNGSL
Trigger: GAGACTACCATTGCGGCTGCATCGCCTTCTCCCCTC...CCAATATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATCCCCTCCTCTGGGCCTaGGCGGAGAGGTTAATTTGG +
Preference number: 4 (lower is better)
Translates to: LKPFTLYALYIIRPYPPYPLLWA*AERLIW
Trigger: CCAAATTAACCTCTCCGCCCAGGCCCAGAGGAGGGG...ATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATGAGACTTTCAGGCTCTaGGGCAGTCAGCGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LKPFTLYALYIIRPYPPYETFRL*GSQREE
Trigger: CTCCTCCCGCTGACTGCCCCAGAGCCTGAAAGTCTC...ATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CATTATAAGGCCTTACCCACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGTGTCATAGTATAGGATaGTGCGGCTACCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: HYKALPTLYWSWPQFQYVCHSIG*CGYHWP
Trigger: AGGCCAGTGGTAGCCGCACCATCCTATACTATGACA...CACATATTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAGGCCTTATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260599.10
CDS-3UTR TCA 90 bp CATTATAAGGCCTTACCCACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGCAATGTGGATCCACTTaGACTGGGTCAGATCAACCT +
Preference number: 4 (lower is better)
Translates to: HYKALPTLYWSWPQFQYVQCGST*TGSDQP
Trigger: AGGTTGATCTGACCCAGTTCAAGTGGATCCACATTG...CACATATTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAGGCCTTATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp GCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATATTGGCAAGGCTTCCTCTGCTaGCTGGAACCCCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: ALYIICSLHYKALPTLYWQGFLC*LEPQVL
Trigger: AAGCACTTGGGGTTCCAGTCAGCAGAGGAAGCCTTG...CCAATATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp GCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATATTGGCAGATCGGACCTCCCTaGGGACAGCAACACTCTGTA +
Preference number: 4 (lower is better)
Translates to: ALYIICSLHYKALPTLYWQIGPP*GQQHSV
Trigger: TACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTG...CCAATATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp ATGCAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCGACTGGAACCCCAAGTaGTTGGCCACATCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: MQLIKWQILIQVCLTLKPDWNPK*LATSLL
Trigger: CAGCAAAGATGTGGCCAAGCACTTGGGGTTCCAGTC...GGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CTCACTCTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCAAATCTCAGTGCTTCCTaGACGCTCCTCCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LTLKPFTLYALYIIRPYPNLSAS*TLLPWE
Trigger: CTCCCAGGGGAGGAGCGTGCAGGAAGCACTGAGATT...TGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAGAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CTCACTCTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCAGCTTCCTCTGCTGACTaGAACCCCAAGTGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LTLKPFTLYALYIIRPYPASSAD*NPKCLA
Trigger: GGCCAAGCACTTGGGGTTCCAGTCAGCAGAGGAAGC...TGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAGAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTTGGCCACATCTTTGCTaGCAAACACCACGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFWPHLC*QTPRLR
Trigger: ACGGAGACGTGGTGTTTGTCAGCAAAGATGTGGCCA...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp CTCACTCTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACAGATCGGACCTCCCTaGGGACAGCAACACTCTGTA +
Preference number: 4 (lower is better)
Translates to: LTLKPFTLYALYIIRPYPQIGPP*GQQHSV
Trigger: TACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTG...TGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAGAGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CTCACTCTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCATGTGCGTCTATCCGCTaGAGCATCTTCACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LTLKPFTLYALYIIRPYPCASIR*SIFTCS
Trigger: GGAGCAGGTGAAGATGCTGCAGCGGATAGACGCACA...TGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAGAGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp GCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATATTGGGACTGGAACCCCAAGTaGTTGGCCACATCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: ALYIICSLHYKALPTLYWDWNPK*LATSLL
Trigger: CAGCAAAGATGTGGCCAAGCACTTGGGGTTCCAGTC...CCAATATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp GCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATATTGGTGTAGCAGACACATCTaGCAGGCTCGTGTCATGGAG +
Preference number: 4 (lower is better)
Translates to: ALYIICSLHYKALPTLYWCSRHI*QARVME
Trigger: CTCCATGACACGAGCCTGCCAGATGTGTCTGCTACA...CCAATATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260598.10
CDS-3UTR CCA 90 bp CTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATTGGGGACGGAGCCTGTaGTCTGAAAGACTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: LKPFTLYALYIIRPYPPYWGRSL*SERLCS
Trigger: GCTACACAGTCTTTCAGACCACAGGCTCCGTCCCCA...ATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260599.10
CDS-3UTR TCA 90 bp CTCACTCTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCATGGCCACATCTTTGCTaGCAAACACCACGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: LTLKPFTLYALYIIRPYPWPHLC*QTPRLR
Trigger: ACGGAGACGTGGTGTTTGTCAGCAAAGATGTGGCCA...TGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAGAGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR GCA 90 bp CTCACTCTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCACGCACAGGATCTaGTTCTCTTCCATGAGGCTA +
Preference number: 4 (lower is better)
Translates to: LTLKPFTLYALYIIRPYPPTHRI*FSSMRL
Trigger: TAGCCTCATGGAAGAGAAGCAGATCCTGTGCGTGGG...TGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAGAGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CTCACTCTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACTCTCACGGTTTCTTTaGCAGGTTCACTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LTLKPFTLYALYIIRPYPLSRFL*QVHWVW
Trigger: CCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAG...TGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAGAGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CTCACTCTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCTGGGTCACATTTGTaGCTGAGGCACGCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: LTLKPFTLYALYIIRPYPPGSHL*LRHALN
Trigger: ATTAAGGGCGTGCCTCAGCCACAAATGTGACCCAGG...TGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAGAGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CATTATAAGGCCTTACCCACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGGTAGCCAAGCAGAATTaGTTCCATTTGACAGATGAA +
Preference number: 4 (lower is better)
Translates to: HYKALPTLYWSWPQFQYVVAKQN*FHLTDE
Trigger: TTCATCTGTCAAATGGAACCAATTCTGCTTGGCTAC...CACATATTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAGGCCTTATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTTGGATCCACTTGAACTaGGTCAGATCAACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFWIHLN*VRSTFS
Trigger: TGAGAAGGTTGATCTGACCCAGTTCAAGTGGATCCA...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTACCCTATATTGGAGTTaGCCCCAATTCCAATATGTG +
Preference number: 4 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFTLYWS*PQFQYV
Trigger: CACATATTGGAATTGGGGCCAACTCCAATATAGGGT...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR TCA 90 bp CTCACTCTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCAGGTATTTCTGGACAATaGAGACCCCATCAAATCACA +
Preference number: 4 (lower is better)
Translates to: LTLKPFTLYALYIIRPYPGISGQ*RPHQIT
Trigger: TGTGATTTGATGGGGTCTTCATTGTCCAGAAATACC...TGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAGAGTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp ATGCAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCATGCAGCTAATTAAATaGCAGATTTTAATCCAGGTC +
Preference number: 4 (lower is better)
Translates to: MQLIKWQILIQVCLTLKPMQLIK*QILIQV
Trigger: GACCTGGATTAAAATCTGCCATTTAATTAGCTGCAT...GGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CCA 90 bp CTCACTCTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCAATGCAGCTAATTAAATaGCAGATTTTAATCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LTLKPFTLYALYIIRPYPMQLIK*QILIQV
Trigger: GACCTGGATTAAAATCTGCCATTTAATTAGCTGCAT...TGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAGAGTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS GCA 90 bp GCGTGGGAGCTCCTCCTCCAGGGAGCCACCTGCAGCGGCCAGGGGTaGAGGGAACGAAAGGAGCAGGGCCCTTCCTCGCGACACCCGAAG +
Preference number: 5 (lower is better)
Translates to: AWELLLQGATCSGQG*RERKEQGPSSRHPK
Trigger: CTTCGGGTGTCGCGAGGAAGGGCCCTGCTCCTTTCGTTCCCTGCACCCCTGGCCGCTGCAGGTGGCTCCCTGGAGGAGGAGCTCCCACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
CDS TCA 90 bp CCTTGCTCTGCCAGGCCACCTGAGACACGTCCACGCCCCGCCGCCTaGAGTCGGCCACCAGGAAGCTTAGGGTGGAGGCCGGGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: PCSARPPETRPRPAA*SRPPGSLGWRPGQE
Trigger: TTCCTGGCCCGGCCTCCACCCTAAGCTTCCTGGTGGCCGACTTCAGGCGGCGGGGCGTGGACGTGTCTCAGGTGGCCTGGCAGAGCAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464371.1
CDS GCA 90 bp TATCCACCACGCGGGGTGGCGGGAAAGCATCCGAGTGGAGCAATTTaGCATCAGGGCCCAGGGCGTCGGCGCCCTCCTCAGCCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: YPPRGVAGKHPSGAI*HQGPGRRRPPQPRH
Trigger: GTGCCTGGGCTGAGGAGGGCGCCGACGCCCTGGGCCCTGATGGCAAATTGCTCCACTCGGATGCTTTCCCGCCACCCCGCGTGGTGGATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS CCA 90 bp GCTCCCAGTGTATCCACCACGCGGGGTGGCGGGAAAGCATCCGAGTaGAGCAATTTGCCATCAGGGCCCAGGGCGTCGGCGCCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: APSVSTTRGGGKASE*SNLPSGPRASAPSS
Trigger: TGAGGAGGGCGCCGACGCCCTGGGCCCTGATGGCAAATTGCTCCACTCGGATGCTTTCCCGCCACCCCGCGTGGTGGATACACTGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS-3UTR CAA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCAGAACGGTGCAGGAGTaGGACGCGTTGCCTCCGCGC +
Preference number: 5 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGRTVQE*DALPPR
Trigger: GCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTCT...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS TCA 90 bp CTTCTCTTCCATGAGGCTACTCCCAGAGCTTCCTGCCCGCCCGGCTaGCGGGGTTCCTCCCGGCCTCTGCCTCTTATCCAGGAGGATGGT +
Preference number: 5 (lower is better)
Translates to: LLFHEATPRASCPPG*RGSSRPLPLIQEDG
Trigger: ACCATCCTCCTGGATAAGAGGCAGAGGCCGGGAGGAACCCCGTCAGCCGGGCGGGCAGGAAGCTCTGGGAGTAGCCTCATGGAAGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000490823.5
CDS CCA 90 bp ACGATGCCATCAAAGCCCTGCAGGCCACACTTCTTGCCGGCCACCTaGCACCCGAATCTCAGTGCTTCCTGCACGCTCCTCCCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: TMPSKPCRPHFLPAT*HPNLSASCTLLPWE
Trigger: CTCCCAGGGGAGGAGCGTGCAGGAAGCACTGAGATTCGGGTGCCAGGTGGCCGGCAAGAAGTGTGGCCTGCAGGGCTTTGATGGCATCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS-3UTR CAA 90 bp AGCCAGGGCAGAGCTGGTGGCAAGCCCAGGGCACTTCTCGCTGCTCTAGCCCAGGAGAAAATGCGCTACTaGCCCCGCACTCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: SQGRAGGKPRALLAALAQEKMRY*PRTLLH
Trigger: GTGCAGGAGAGTGCGGGGCAAGTAGCGCATTTTCTC...CTGGGCTAGAGCAGCGAGAAGTGCCCTGGGCTTGCCACCAGCTCTGCCCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp CAACCTGGACGCCAGGCTGGATGGAGGGGAGAAGGCGATGCAGCCGCAATGGTATCTTCCCGTAGCAGGTaGCCTGGGCCTGCAGATGGC +
Preference number: 5 (lower is better)
Translates to: QPGRQAGWRGEGDAAAMVSSRSR*PGPADG
Trigger: GCCATCTGCAGGCCCAGGCAACCTGCTACGGGAAGA...TACCATTGCGGCTGCATCGCCTTCTCCCCTCCATCCAGCCTGGCGTCCAGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCGGAGGCTGCCTGGTGTaGTGTGCGTCTATCCGCTGC +
Preference number: 5 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGGGCLV*CASIRC
Trigger: GCAGCGGATAGACGCACACAACACCAGGCAGCCTCC...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp GAGTCTGCACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCTGCAGGCCACACTTCTaGCCGGCCACCTGGCACCCG +
Preference number: 5 (lower is better)
Translates to: ESAQRRAPKSSHGFFGRFCRPHF*PATWHP
Trigger: CGGGTGCCAGGTGGCCGGCAAGAAGTGTGGCCTGCA...GAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS GCA 90 bp AATGCAAAGAGAAAATGCGCTACTTGCCCCGCACTCTCCTGCACCTaGGTCTCCGACTCCCGACCCGGGACACGCGAGGTACAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: NAKRKCATCPALSCT*VSDSRPGTREVQLG
Trigger: GCCCAGCTGTACCTCGCGTGTCCCGGGTCGGGAGTCGGAGACGCAGGTGCAGGAGAGTGCGGGGCAAGTAGCGCATTTTCTCTTTGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000490823.5
CDS GCA 90 bp GCGCGGCTAAGCGATCTCGAGAATGCAAAGAGAAAATGCGCTACTTaGCCCGCACTCTCCTGCACCTGCGTCTCCGACTCCCGACCCGGG +
Preference number: 5 (lower is better)
Translates to: ARLSDLENAKRKCAT*PALSCTCVSDSRPG
Trigger: CCCGGGTCGGGAGTCGGAGACGCAGGTGCAGGAGAGTGCGGGGCAAGTAGCGCATTTTCTCTTTGCATTCTCGAGATCGCTTAGCCGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000490823.5
CDS GCA 90 bp ACCAGGCTGATGACGTCCAGCACCACTAGCCCCACGCACAGGATCTaGTTCTCTTCCATGAGGCTACTCCCAGAGCTTCCTGCCCGCCCG +
Preference number: 5 (lower is better)
Translates to: TRLMTSSTTSPTHRI*FSSMRLLPELPARP
Trigger: CGGGCGGGCAGGAAGCTCTGGGAGTAGCCTCATGGAAGAGAAGCAGATCCTGTGCGTGGGGCTAGTGGTGCTGGACGTCATCAGCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000490823.5
CDS GCA 90 bp AGGGGGCTCCGAGCAGGGAGAGAACGGTGCAGGAGTTGGACGCGTTaGCTCCGCGCTGCCATCTCTGGGACAAACACCTTATCTCCGAGT +
Preference number: 5 (lower is better)
Translates to: RGLRAGRERCRSWTR*LRAAISGTNTLSPS
Trigger: ACTCGGAGATAAGGTGTTTGTCCCAGAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTCTCTCCCTGCTCGGAGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
CDS GCA 90 bp AGCTCCTCTCGTGGCTTCTCCACCTCCACGGACACCCGGATCTTCTaGTCTGGAGGCTGCCTGGTGTTGTGTGCGTCTATCCGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SSSRGFSTSTDTRIF*SGGCLVLCASIRCS
Trigger: GCTGCAGCGGATAGACGCACACAACACCAGGCAGCCTCCAGAGCAGAAGATCCGGGTGTCCGTGGAGGTGGAGAAGCCACGAGAGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS GCA 90 bp CCTGCTCTCACACGATGCCATCAAAGCCCTGCAGGCCACACTTCTTaGCGGCCACCTGGCACCCGAATCTCAGTGCTTCCTGCACGCTCC +
Preference number: 5 (lower is better)
Translates to: PALTRCHQSPAGHTS*RPPGTRISVLPARS
Trigger: GGAGCGTGCAGGAAGCACTGAGATTCGGGTGCCAGGTGGCCGGCAAGAAGTGTGGCCTGCAGGGCTTTGATGGCATCGTGTGAGAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS GCA 90 bp GTAGTCTCCATGGTGTGTGAGGAGCCGGCACCTGCTCTCACACGATaGCATCAAAGCCCTGCAGGCCACACTTCTTGCCGGCCACCTGGC +
Preference number: 5 (lower is better)
Translates to: VVSMVCEEPAPALTR*HQSPAGHTSCRPPG
Trigger: GCCAGGTGGCCGGCAAGAAGTGTGGCCTGCAGGGCTTTGATGGCATCGTGTGAGAGCAGGTGCCGGCTCCTCACACACCATGGAGACTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS GCA 90 bp AGGGGGCTCCGAGCAGGGAGAGAACGGTGCAGGAGTTGGACGCGTTaGCTCCGCGCTGCCATCTCTGGGACAAACACCTCTGTGAAAAGG +
Preference number: 5 (lower is better)
Translates to: RGLRAGRERCRSWTR*LRAAISGTNTSVKR
Trigger: CCTTTTCACAGAGGTGTTTGTCCCAGAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTCTCTCCCTGCTCGGAGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490823.5
CDS TCA 90 bp GAGGGGAGAAGGCGATGCAGCCGCAATGGTAGTCTCCATGGTGTGTaGGGAGCCGGCACCTGCTCTCACACGATGCCATCAAAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: EGRRRCSRNGSLHGV*GAGTCSHTMPSKPC
Trigger: GCAGGGCTTTGATGGCATCGTGTGAGAGCAGGTGCCGGCTCCTCACACACCATGGAGACTACCATTGCGGCTGCATCGCCTTCTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS GCA 90 bp CACGGACACCCGGATCTTCTGCTCTGGAGGCTGCCTGGTGTTGTGTaGGTCTATCCGCTGCAGCATCTTCACCTGCTCCGATGCGTTCCG +
Preference number: 5 (lower is better)
Translates to: HGHPDLLLWRLPGVV*VYPLQHLHLLRCVP
Trigger: CGGAACGCATCGGAGCAGGTGAAGATGCTGCAGCGGATAGACGCACACAACACCAGGCAGCCTCCAGAGCAGAAGATCCGGGTGTCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS GCA 90 bp GGCTTCTCCACCTCCACGGACACCCGGATCTTCTGCTCTGGAGGCTaGCTGGTGTTGTGTGCGTCTATCCGCTGCAGCATCTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: GFSTSTDTRIFCSGG*LVLCASIRCSIFTC
Trigger: GCAGGTGAAGATGCTGCAGCGGATAGACGCACACAACACCAGGCAGCCTCCAGAGCAGAAGATCCGGGTGTCCGTGGAGGTGGAGAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS CCA 90 bp GGCATTGAAGGTGTCTCCAGCTCCCAGTGTATCCACCACGCGGGGTaGCGGGAAAGCATCCGAGTGGAGCAATTTGCCATCAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GIEGVSSSQCIHHAG*RESIRVEQFAIRAQ
Trigger: CTGGGCCCTGATGGCAAATTGCTCCACTCGGATGCTTTCCCGCCACCCCGCGTGGTGGATACACTGGGAGCTGGAGACACCTTCAATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS-3UTR CAA 90 bp CAACCTGGACGCCAGGCTGGATGGAGGGGAGAAGGCGATGCAGCCGCAATGGTAGAGAAAATGCGCTACTaGCCCCGCACTCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: QPGRQAGWRGEGDAAAMVEKMRY*PRTLLH
Trigger: GTGCAGGAGAGTGCGGGGCAAGTAGCGCATTTTCTC...TACCATTGCGGCTGCATCGCCTTCTCCCCTCCATCCAGCCTGGCGTCCAGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTTCTTCCCGTAGCAGGTaGCCTGGGCCTGCAGATGGC +
Preference number: 5 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPSSRSR*PGPADG
Trigger: GCCATCTGCAGGCCCAGGCAACCTGCTACGGGAAGA...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp GTCCTCCCCACAGCTTGCATCTGTCCCCTGAACAGGGCAACCTGGACGCCAGGCTCCTCCTTAGGGTACTaGTCCACCAGGCTGATGACG +
Preference number: 5 (lower is better)
Translates to: VLPTACICPLNRATWTPGSSLGY*STRLMT
Trigger: CGTCATCAGCCTGGTGGACAAGTACCCTAAGGAGGA...GCCTGGCGTCCAGGTTGCCCTGTTCAGGGGACAGATGCAAGCTGTGGGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTTCCGAGTGGAGCAATTaGCCATCAGGGCCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPSEWSN*PSGPRA
Trigger: CGCCCTGGGCCCTGATGGCAAATTGCTCCACTCGGA...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp GGCGATGCAGCCGCAATGGTAGTCTCCATGGTGTGTGAGGAGCCGGCACCTGCTAGTCCTCCCCACAGCTaGCATCTGTCCCCTGAACAG +
Preference number: 5 (lower is better)
Translates to: GDAAAMVVSMVCEEPAPASPPHS*HLSPEQ
Trigger: CTGTTCAGGGGACAGATGCAAGCTGTGGGGAGGACT...AGCAGGTGCCGGCTCCTCACACACCATGGAGACTACCATTGCGGCTGCATCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp GTCCTCCCCACAGCTTGCATCTGTCCCCTGAACAGGGCAACCTGGACGCCAGGCGCTCTCACGGTTTCTTaGGCAGGTTCACTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: VLPTACICPLNRATWTPGALTVS*AGSLGV
Trigger: CACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGC...GCCTGGCGTCCAGGTTGCCCTGTTCAGGGGACAGATGCAAGCTGTGGGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS TCA 90 bp GCGGAGGTCATCCAGGACAAAATCAGCAACATGGCCAGGAGCCATTaGGCCCATGAAGGCACAGGGGGCTCCGAGCAGGGAGAGAACGGT +
Preference number: 5 (lower is better)
Translates to: AEVIQDKISNMARSH*AHEGTGGSEQGENG
Trigger: ACCGTTCTCTCCCTGCTCGGAGCCCCCTGTGCCTTCATGGGCTCAATGGCTCCTGGCCATGTTGCTGATTTTGTCCTGGATGACCTCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260599.10
ENST00000429697.1
ENST00000490823.5
CDS CCA 90 bp CTCTCGTGGCTTCTCCACCTCCACGGACACCCGGATCTTCTGCTCTaGAGGCTGCCTGGTGTTGTGTGCGTCTATCCGCTGCAGCATCTT +
Preference number: 5 (lower is better)
Translates to: LSWLLHLHGHPDLLL*RLPGVVCVYPLQHL
Trigger: AAGATGCTGCAGCGGATAGACGCACACAACACCAGGCAGCCTCCAGAGCAGAAGATCCGGGTGTCCGTGGAGGTGGAGAAGCCACGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS CCA 90 bp GGGCCACTAGGGACCCTGAAAGGCAGGGGTGCAAGCAAAGGGGGCTaGGAGAGAACTGGGAATCACAGTCTTGCCACAGGCAGTGCAACA +
Preference number: 5 (lower is better)
Translates to: GPLGTLKGRGASKGG*ERTGNHSLATGSAT
Trigger: TGTTGCACTGCCTGTGGCAAGACTGTGATTCCCAGTTCTCTCCCAGCCCCCTTTGCTTGCACCCCTGCCTTTCAGGGTCCCTAGTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469936.5
CDS-3UTR CAA 90 bp CAACCTGGACGCCAGGCTGGATGGAGGGGAGAAGGCGATGCAGCCGCAATGGTATCCTCCTTAGGGTACTaGTCCACCAGGCTGATGACG +
Preference number: 5 (lower is better)
Translates to: QPGRQAGWRGEGDAAAMVSSLGY*STRLMT
Trigger: CGTCATCAGCCTGGTGGACAAGTACCCTAAGGAGGA...TACCATTGCGGCTGCATCGCCTTCTCCCCTCCATCCAGCCTGGCGTCCAGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCAAGATGACGGAGGCATaGAAGGTGTCTCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGKMTEA*KVSPAP
Trigger: GGGAGCTGGAGACACCTTCAATGCCTCCGTCATCTT...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp AGCCAGGGCAGAGCTGGTGGCAAGCCCAGGGCACTTCTCGCTGCTCTAGCCCAGGGCGGAGAGGTTAATTaGGGGAATGGACACAAAGAG +
Preference number: 5 (lower is better)
Translates to: SQGRAGGKPRALLAALAQGGEVN*GNGHKE
Trigger: CTCTTTGTGTCCATTCCCCAAATTAACCTCTCCGCC...CTGGGCTAGAGCAGCGAGAAGTGCCCTGGGCTTGCCACCAGCTCTGCCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS TCA 90 bp CATCCAGGACAAAATCAGCAACATGGCCAGGAGCCATTGAGCCCATaGAGGCACAGGGGGCTCCGAGCAGGGAGAGAACGGTGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: HPGQNQQHGQEPLSP*RHRGLRAGRERCRS
Trigger: ACTCCTGCACCGTTCTCTCCCTGCTCGGAGCCCCCTGTGCCTTCATGGGCTCAATGGCTCCTGGCCATGTTGCTGATTTTGTCCTGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260599.10
ENST00000429697.1
ENST00000490823.5
CDS GCA 90 bp ATCTTCTGCTCTGGAGGCTGCCTGGTGTTGTGTGCGTCTATCCGCTaGAGCATCTTCACCTGCTCCGATGCGTTCCGGCCCTCAATGTGG +
Preference number: 5 (lower is better)
Translates to: IFCSGGCLVLCASIR*SIFTCSDAFRPSMW
Trigger: CCACATTGAGGGCCGGAACGCATCGGAGCAGGTGAAGATGCTGCAGCGGATAGACGCACACAACACCAGGCAGCCTCCAGAGCAGAAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS CCA 90 bp AAACACCACGTCTCCGTAGCCAAACAGCTGGAAGAGCTCCTCTCGTaGCTTCTCCACCTCCACGGACACCCGGATCTTCTGCTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: KHHVSVAKQLEELLS*LLHLHGHPDLLLWR
Trigger: CCTCCAGAGCAGAAGATCCGGGTGTCCGTGGAGGTGGAGAAGCCACGAGAGGAGCTCTTCCAGCTGTTTGGCTACGGAGACGTGGTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS CCA 90 bp GACCCTGAAAGGCAGGGGTGCAAGCAAAGGGGGCTGGGAGAGAACTaGGAATCACAGTCTTGCCACAGGCAGTGCAACAGGGCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: DPERQGCKQRGLGEN*ESQSCHRQCNRAGD
Trigger: ATCTCCTGCCCTGTTGCACTGCCTGTGGCAAGACTGTGATTCCCAGTTCTCTCCCAGCCCCCTTTGCTTGCACCCCTGCCTTTCAGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469936.5
CDS-3UTR CAA 90 bp TCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCACATTTGTGGCTGGCCAACCCAGAGGTCTaGGTCCCCGGTCTTCCCGTA +
Preference number: 5 (lower is better)
Translates to: SDLPEDSNTLYPGSHLWLANPEV*VPGLPV
Trigger: TACGGGAAGACCGGGGACCAAGACCTCTGGGTTGGC...CAGCCACAAATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp GGCGATGCAGCCGCAATGGTAGTCTCCATGGTGTGTGAGGAGCCGGCACCTGCTCGGTTGCCATTGGAGTaGTTGATGATGCAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: GDAAAMVVSMVCEEPAPARLPLE*LMMQQE
Trigger: CTCCTGCTGCATCATCAACAACTCCAATGGCAACCG...AGCAGGTGCCGGCTCCTCACACACCATGGAGACTACCATTGCGGCTGCATCGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260598.10
CDS-3UTR CAA 90 bp GGCGATGCAGCCGCAATGGTAGTCTCCATGGTGTGTGAGGAGCCGGCACCTGCTTGGAACCCCAAGTGCTaGGCCACATCTTTGCTGACA +
Preference number: 5 (lower is better)
Translates to: GDAAAMVVSMVCEEPAPAWNPKC*ATSLLT
Trigger: TGTCAGCAAAGATGTGGCCAAGCACTTGGGGTTCCA...AGCAGGTGCCGGCTCCTCACACACCATGGAGACTACCATTGCGGCTGCATCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp TCAGTTCAGCTCAGCGGTGTGGACTCCCAGCTTCTGAGCTGTGGGAATAGAGTCTCCGAGTGGAGCAATTaGCCATCAGGGCCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: SVQLSGVDSQLLSCGNRVSEWSN*PSGPRA
Trigger: CGCCCTGGGCCCTGATGGCAAATTGCTCCACTCGGA...GACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAGCTGAACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp CAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCTTGCCATTGGAGTTGTaGATGATGCAGCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: QGPEELSRFLWQVHWVWGLPLEL*MMQQEL
Trigger: CAGCTCCTGCTGCATCATCAACAACTCCAATGGCAA...GCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260598.10
CDS-3UTR CAA 90 bp AGCCAGGGCAGAGCTGGTGGCAAGCCCAGGGCACTTCTCGCTGCTCTAGCCCAGCACCCTATATTGGAGTaGGCCCCAATTCCAATATGT +
Preference number: 5 (lower is better)
Translates to: SQGRAGGKPRALLAALAQHPILE*APIPIC
Trigger: ACATATTGGAATTGGGGCCAACTCCAATATAGGGTG...CTGGGCTAGAGCAGCGAGAAGTGCCCTGGGCTTGCCACCAGCTCTGCCCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp TCAGTTCAGCTCAGCGGTGTGGACTCCCAGCTTCTGAGCTGTGGGAATAGAGTCAGTCCTCCCCACAGCTaGCATCTGTCCCCTGAACAG +
Preference number: 5 (lower is better)
Translates to: SVQLSGVDSQLLSCGNRVSPPHS*HLSPEQ
Trigger: CTGTTCAGGGGACAGATGCAAGCTGTGGGGAGGACT...GACTCTATTCCCACAGCTCAGAAGCTGGGAGTCCACACCGCTGAGCTGAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp GTCCTCCCCACAGCTTGCATCTGTCCCCTGAACAGGGCAACCTGGACGCCAGGCCACCCTATATTGGAGTaGGCCCCAATTCCAATATGT +
Preference number: 5 (lower is better)
Translates to: VLPTACICPLNRATWTPGHPILE*APIPIC
Trigger: ACATATTGGAATTGGGGCCAACTCCAATATAGGGTG...GCCTGGCGTCCAGGTTGCCCTGTTCAGGGGACAGATGCAAGCTGTGGGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp GAGTCTGCACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCTGCTTGGCCACATCTTaGCTGACAAACACCACGTCT +
Preference number: 5 (lower is better)
Translates to: ESAQRRAPKSSHGFFGRFCLATS*LTNTTS
Trigger: AGACGTGGTGTTTGTCAGCAAAGATGTGGCCAAGCA...GAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp GAGCTCTCACGGTTTCTTTGGCAGGTTCACTGGGTGTGGGGCACCGAGTGTCCTGGCGGAGAGGTTAATTaGGGGAATGGACACAAAGAG +
Preference number: 5 (lower is better)
Translates to: ELSRFLWQVHWVWGTECPGGEVN*GNGHKE
Trigger: CTCTTTGTGTCCATTCCCCAAATTAACCTCTCCGCC...AGGACACTCGGTGCCCCACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS TCA 90 bp CCCTTTCCTCACACGACCATACAAGCCCCTCAAGGCTTCCTCTGCTaGCTGGAACCCCAAGTGCTTGGCCACATCTTTGCTGACAAACAC +
Preference number: 5 (lower is better)
Translates to: PFPHTTIQAPQGFLC*LEPQVLGHIFADKH
Trigger: GTGTTTGTCAGCAAAGATGTGGCCAAGCACTTGGGGTTCCAGTCAGCAGAGGAAGCCTTGAGGGGCTTGTATGGTCGTGTGAGGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS CCA 90 bp AGACACAGATTAGAGCCTGGAAGTGGTCTGGACCTCCAAAAGGAGTaGGGAGAGGGTGCTGGAGCACACGAGCCTCTAAGAGAAGAAGAG +
Preference number: 5 (lower is better)
Translates to: RHRLEPGSGLDLQKE*GEGAGAHEPLREEE
Trigger: CTCTTCTTCTCTTAGAGGCTCGTGTGCTCCAGCACCCTCTCCCCACTCCTTTTGGAGGTCCAGACCACTTCCAGGCTCTAATCTGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464371.1
CDS-3UTR CAA 90 bp GAGTCTGCACAACGCAGGGCCCCGAAGAGCTCTCACGGTTTCTTTGGCAGGTTCTCAATGTGGATCCACTaGAACTGGGTCAGATCAACC +
Preference number: 5 (lower is better)
Translates to: ESAQRRAPKSSHGFFGRFSMWIH*NWVRST
Trigger: GGTTGATCTGACCCAGTTCAAGTGGATCCACATTGA...GAACCTGCCAAAGAAACCGTGAGAGCTCTTCGGGGCCCTGCGTTGTGCAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS TCA 90 bp GGACGCGTTGCCTCCGCGCTGCCATCTCTGGGACAAACACCTCTGTaGAAAGGACTTCTGGTAAACTCCTCTTGGAATTTAGCACCAGGA +
Preference number: 5 (lower is better)
Translates to: GRVASALPSLGQTPL*KGLLVNSSWNLAPG
Trigger: TCCTGGTGCTAAATTCCAAGAGGAGTTTACCAGAAGTCCTTTTCACAGAGGTGTTTGTCCCAGAGATGGCAGCGCGGAGGCAACGCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490823.5
CDS-3UTR CAA 90 bp CATTATAAGGCCTTACCCACCCTATATTGGAGTTGGCCCCAATTCCAATATGTGAGAACGGTGCAGGAGTaGGACGCGTTGCCTCCGCGC +
Preference number: 5 (lower is better)
Translates to: HYKALPTLYWSWPQFQYVRTVQE*DALPPR
Trigger: GCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTCT...CACATATTGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAGGCCTTATAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTAAGATGACGGAGGCATaGAAGGTGTCTCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: ICVPDRTSLRTATLCILGKMTEA*KVSPAP
Trigger: GGGAGCTGGAGACACCTTCAATGCCTCCGTCATCTT...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTTGCAGGCCACACTTCTaGCCGGCCACCTGGCACCCG +
Preference number: 5 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFCRPHF*PATWHP
Trigger: CGGGTGCCAGGTGGCCGGCAAGAAGTGTGGCCTGCA...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp ATATGTGTTCCAGATCGGACCTCCCTGAGGACAGCAACACTCTGTATCCTGGGTCTTACCCACCCTATATaGGAGTTGGCCCCAATTCCA +
Preference number: 5 (lower is better)
Translates to: ICVPDRTSLRTATLCILGLTHPI*ELAPIP
Trigger: TGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAG...ACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGGAACACATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp CTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATCAGGAGTTGGACGCGTaGCCTCCGCGCTGCCATCTC +
Preference number: 5 (lower is better)
Translates to: LKPFTLYALYIIRPYPPYQELDA*PPRCHL
Trigger: GAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCTG...ATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp CTCACTCTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACAGGAGTTGGACGCGTaGCCTCCGCGCTGCCATCTC +
Preference number: 5 (lower is better)
Translates to: LTLKPFTLYALYIIRPYPQELDA*PPRCHL
Trigger: GAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCTG...TGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAGAGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp CTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATGGAGGCTGCCTGGTGTaGTGTGCGTCTATCCGCTGC +
Preference number: 5 (lower is better)
Translates to: LKPFTLYALYIIRPYPPYGGCLV*CASIRC
Trigger: GCAGCGGATAGACGCACACAACACCAGGCAGCCTCC...ATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp ATGCAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCGCTCTCACGGTTTCTTaGGCAGGTTCACTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: MQLIKWQILIQVCLTLKPALTVS*AGSLGV
Trigger: CACACCCAGTGAACCTGCCAAAGAAACCGTGAGAGC...GGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp ATGCAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTATCCTGGGTCACATTaGTGGCTGAGGCACGCCCTT +
Preference number: 5 (lower is better)
Translates to: MQLIKWQILIQVCLTLKPYPGSH*WLRHAL
Trigger: AAGGGCGTGCCTCAGCCACAAATGTGACCCAGGATA...GGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTCTACCACTGGCCTCGTaGATGATGACCGTGGCGATG +
Preference number: 5 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFLPLAS*MMTVAM
Trigger: CATCGCCACGGTCATCATCAACGAGGCCAGTGGTAG...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260599.10
CDS-3UTR CAA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTTATCCTGGGTCACATTaGTGGCTGAGGCACGCCCTT +
Preference number: 5 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFYPGSH*WLRHAL
Trigger: AAGGGCGTGCCTCAGCCACAAATGTGACCCAGGATA...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp CAGCTAATTAAATGGCAGATTTTAATCCAGGTCTGTCTCACTCTAAAGCCCTTTTGCTTGGCCACATCTTaGCTGACAAACACCACGTCT +
Preference number: 5 (lower is better)
Translates to: QLIKWQILIQVCLTLKPFCLATS*LTNTTS
Trigger: AGACGTGGTGTTTGTCAGCAAAGATGTGGCCAAGCA...AAAGGGCTTTAGAGTGAGACAGACCTGGATTAAAATCTGCCATTTAATTAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp CTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATTGGAACCCCAAGTGCTaGGCCACATCTTTGCTGACA +
Preference number: 5 (lower is better)
Translates to: LKPFTLYALYIIRPYPPYWNPKC*ATSLLT
Trigger: TGTCAGCAAAGATGTGGCCAAGCACTTGGGGTTCCA...ATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp CTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATCTTACCCACCCTATATaGGAGTTGGCCCCAATTCCA +
Preference number: 5 (lower is better)
Translates to: LKPFTLYALYIIRPYPPYLTHPI*ELAPIP
Trigger: TGGAATTGGGGCCAACTCCAATATAGGGTGGGTAAG...ATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS-3UTR CAA 90 bp CTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATATGGTACGGTTGCCATaGGAGTTGTTGATGATGCAG +
Preference number: 5 (lower is better)
Translates to: LKPFTLYALYIIRPYPPYMVRLP*ELLMMQ
Trigger: CTGCATCATCAACAACTCCAATGGCAACCGTACCAT...ATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260598.10
CDS-3UTR CAA 90 bp CTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATAGCACAATGGTACGGTaGCCATTGGAGTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: LKPFTLYALYIIRPYPPYSTMVR*PLELLM
Trigger: CATCAACAACTCCAATGGCAACCGTACCATTGTGCT...ATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260598.10
CDS-3UTR CAA 90 bp CTAAAGCCCTTTACATTATATGCTCTTTACATTATAAGGCCTTACCCACCCTATTCAATGTGGATCCACTaGAACTGGGTCAGATCAACC +
Preference number: 5 (lower is better)
Translates to: LKPFTLYALYIIRPYPPYSMWIH*NWVRST
Trigger: GGTTGATCTGACCCAGTTCAAGTGGATCCACATTGA...ATAGGGTGGGTAAGGCCTTATAATGTAAAGAGCATATAATGTAAAGGGCTTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260598.10
ENST00000260599.10
CDS TCA 72 bp GCCAGGCCACCTGAGACACGTCCACGCCCCGCCGCCTaGAGTCGGCCACCAGGAAGCTTAGGGTGGAGGCCG +
Preference number: 6 (lower is better)
Translates to: ARPPETRPRPAA*SRPPGSLGWRP
Trigger: CGGCCTCCACCCTAAGCTTCCTGGTGGCCGACTTCAGGCGGCGGGGCGTGGACGTGTCTCAGGTGGCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464371.1
CDS GCA 72 bp CTCCTCCTCCAGGGAGCCACCTGCAGCGGCCAGGGGTaGAGGGAACGAAAGGAGCAGGGCCCTTCCTCGCGA +
Preference number: 6 (lower is better)
Translates to: LLLQGATCSGQG*RERKEQGPSSR
Trigger: TCGCGAGGAAGGGCCCTGCTCCTTTCGTTCCCTGCACCCCTGGCCGCTGCAGGTGGCTCCCTGGAGGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
CDS GCA 72 bp CGCGGGGTGGCGGGAAAGCATCCGAGTGGAGCAATTTaGCATCAGGGCCCAGGGCGTCGGCGCCCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: RGVAGKHPSGAI*HQGPGRRRPPQ
Trigger: CTGAGGAGGGCGCCGACGCCCTGGGCCCTGATGGCAAATTGCTCCACTCGGATGCTTTCCCGCCACCCCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS CAA 90 bp GTATCCACCACGCGGGGTGGCGGGAAAGCATCCGAGTGGAGCAATTaGCCATCAGGGCCCAGGGCGTCGGCGCCCTCCTCAGCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: VSTTRGGGKASEWSN*PSGPRASAPSSAQA
Trigger: TGCCTGGGCTGAGGAGGGCGCCGACGCCCTGGGCCCTGATGGCAAATTGCTCCACTCGGATGCTTTCCCGCCACCCCGCGTGGTGGATAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS CCA 72 bp GGGTTCCTCCCGGCCTCTGCCTCTTATCCAGGAGGATaGTGTCCCCGCTCCCAGCTGCCCTGGCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: GFLPASASYPGG*CPRSQLPWLLL
Trigger: GAGGAGGAGCCAGGGCAGCTGGGAGCGGGGACACCATCCTCCTGGATAAGAGGCAGAGGCCGGGAGGAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000490823.5
CDS CAA 72 bp CAGGGGGCTCCGAGCAGGGAGAGAACGGTGCAGGAGTaGGACGCGTTGCCTCCGCGCTGCCATCTCTGGGAC +
Preference number: 6 (lower is better)
Translates to: QGAPSRERTVQE*DALPPRCHLWD
Trigger: GTCCCAGAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTCTCTCCCTGCTCGGAGCCCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000490823.5
CDS CAA 72 bp ACGCGGGGTGGCGGGAAAGCATCCGAGTGGAGCAATTaGCCATCAGGGCCCAGGGCGTCGGCGCCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: TRGGGKASEWSN*PSGPRASAPSS
Trigger: TGAGGAGGGCGCCGACGCCCTGGGCCCTGATGGCAAATTGCTCCACTCGGATGCTTTCCCGCCACCCCGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS GCA 72 bp GCCGGCACCTGCTCTCACACGATGCCATCAAAGCCCTaGAGGCCACACTTCTTGCCGGCCACCTGGCACCCG +
Preference number: 6 (lower is better)
Translates to: AGTCSHTMPSKP*RPHFLPATWHP
Trigger: CGGGTGCCAGGTGGCCGGCAAGAAGTGTGGCCTGCAGGGCTTTGATGGCATCGTGTGAGAGCAGGTGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS CCA 72 bp AGGGGGCTCCGAGCAGGGAGAGAACGGTGCAGGAGTTaGACGCGTTGCCTCCGCGCTGCCATCTCTGGGACA +
Preference number: 6 (lower is better)
Translates to: RGLRAGRERCRS*TRCLRAAISGT
Trigger: TGTCCCAGAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTCTCTCCCTGCTCGGAGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000490823.5
CDS CCA 72 bp GTATCCACCACGCGGGGTGGCGGGAAAGCATCCGAGTaGAGCAATTTGCCATCAGGGCCCAGGGCGTCGGCG +
Preference number: 6 (lower is better)
Translates to: VSTTRGGGKASE*SNLPSGPRASA
Trigger: CGCCGACGCCCTGGGCCCTGATGGCAAATTGCTCCACTCGGATGCTTTCCCGCCACCCCGCGTGGTGGATAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS CCA 72 bp GTCCCCGCTCCCAGCTGCCCTGGCTCCTCCTCCGCGTaGGAGCTCCTCCTCCAGGGAGCCACCTTTTTAAAG +
Preference number: 6 (lower is better)
Translates to: VPAPSCPGSSSA*ELLLQGATFLK
Trigger: CTTTAAAAAGGTGGCTCCCTGGAGGAGGAGCTCCCACGCGGAGGAGGAGCCAGGGCAGCTGGGAGCGGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490823.5
CDS CAA 72 bp CCCAGAGGTCTTGGTCCCCGGTCTTCCCGTAGCAGGTaGCCTGGGCCTGCAGATGGCAACGCCTCCCACTTC +
Preference number: 6 (lower is better)
Translates to: PRGLGPRSSRSR*PGPADGNASHF
Trigger: GAAGTGGGAGGCGTTGCCATCTGCAGGCCCAGGCAACCTGCTACGGGAAGACCGGGGACCAAGACCTCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
CDS CAA 72 bp GACCCGAGCGGGTCTAGGAAAGCCAACCCAGAGGTCTaGGTCCCCGGTCTTCCCGTAGCAGGTTGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: DPSGSRKANPEV*VPGLPVAGCLG
Trigger: GCCCAGGCAACCTGCTACGGGAAGACCGGGGACCAAGACCTCTGGGTTGGCTTTCCTAGACCCGCTCGGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
CDS TCA 72 bp GCCAGGCCACCTGAGACACGTCCACGCCCCGCCGCCTaGAGTCGGCCACCAGGAAGCTGTCATAGTATAGGA +
Preference number: 6 (lower is better)
Translates to: ARPPETRPRPAA*SRPPGSCHSIG
Trigger: TCCTATACTATGACAGCTTCCTGGTGGCCGACTTCAGGCGGCGGGGCGTGGACGTGTCTCAGGTGGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429697.1
CDS GCA 72 bp AGAAAATGCGCTACTTGCCCCGCACTCTCCTGCACCTaGGTCTCCGACTCCCGACCCGGGACACGCGAGGTA +
Preference number: 6 (lower is better)
Translates to: RKCATCPALSCT*VSDSRPGTREV
Trigger: TACCTCGCGTGTCCCGGGTCGGGAGTCGGAGACGCAGGTGCAGGAGAGTGCGGGGCAAGTAGCGCATTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000490823.5
CDS GCA 72 bp TTGCCGGCCACCTGGCACCCGAATCTCAGTGCTTCCTaGACGCTCCTCCCCTGGGAGAGGCTGAAGATGACG +
Preference number: 6 (lower is better)
Translates to: LPATWHPNLSAS*TLLPWERLKMT
Trigger: CGTCATCTTCAGCCTCTCCCAGGGGAGGAGCGTGCAGGAAGCACTGAGATTCGGGTGCCAGGTGGCCGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS CAA 72 bp CCGAGCAGGGAGAGAACGGTGCAGGAGTTGGACGCGTaGCCTCCGCGCTGCCATCTCTGGGACAAACACCTC +
Preference number: 6 (lower is better)
Translates to: PSRERTVQELDA*PPRCHLWDKHL
Trigger: GAGGTGTTTGTCCCAGAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTCTCTCCCTGCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490823.5
CDS CAA 90 bp ACACCCGAAGACCCGAGCGGGTCTAGGAAAGCCAACCCAGAGGTCTaGGTCCCCGGTCTTCCCGTAGCAGGTTGCCTGGGCCTGCAGATG +
Preference number: 6 (lower is better)
Translates to: TPEDPSGSRKANPEV*VPGLPVAGCLGLQM
Trigger: CATCTGCAGGCCCAGGCAACCTGCTACGGGAAGACCGGGGACCAAGACCTCTGGGTTGGCTTTCCTAGACCCGCTCGGGTCTTCGGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
CDS CAA 90 bp CAGGGGGCTCCGAGCAGGGAGAGAACGGTGCAGGAGTTGGACGCGTaGCCTCCGCGCTGCCATCTCTGGGACAAACACCTTATCTCCGAG +
Preference number: 6 (lower is better)
Translates to: QGAPSRERTVQELDA*PPRCHLWDKHLISE
Trigger: CTCGGAGATAAGGTGTTTGTCCCAGAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTCTCTCCCTGCTCGGAGCCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
CDS CAA 90 bp TCCTGCACGCTCCTCCCCTGGGAGAGGCTGAAGATGACGGAGGCATaGAAGGTGTCTCCAGCTCCCAGTGTATCCACCACGCGGGGTGGC +
Preference number: 6 (lower is better)
Translates to: SCTLLPWERLKMTEA*KVSPAPSVSTTRGG
Trigger: GCCACCCCGCGTGGTGGATACACTGGGAGCTGGAGACACCTTCAATGCCTCCGTCATCTTCAGCCTCTCCCAGGGGAGGAGCGTGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS CAA 90 bp ATGAAGGCACAGGGGGCTCCGAGCAGGGAGAGAACGGTGCAGGAGTaGGACGCGTTGCCTCCGCGCTGCCATCTCTGGGACAAACACCTC +
Preference number: 6 (lower is better)
Translates to: MKAQGAPSRERTVQE*DALPPRCHLWDKHL
Trigger: GAGGTGTTTGTCCCAGAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTCTCTCCCTGCTCGGAGCCCCCTGTGCCTTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490823.5
CDS CAA 90 bp ATGAAGGCACAGGGGGCTCCGAGCAGGGAGAGAACGGTGCAGGAGTaGGACGCGTTGCCTCCGCGCTGCCATCTCTGGGACAAACACCTT +
Preference number: 6 (lower is better)
Translates to: MKAQGAPSRERTVQE*DALPPRCHLWDKHL
Trigger: AAGGTGTTTGTCCCAGAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTCTCTCCCTGCTCGGAGCCCCCTGTGCCTTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
CDS CAA 90 bp CAGGGGGCTCCGAGCAGGGAGAGAACGGTGCAGGAGTTGGACGCGTaGCCTCCGCGCTGCCATCTCTGGGACAAACACCTCTGTGAAAAG +
Preference number: 6 (lower is better)
Translates to: QGAPSRERTVQELDA*PPRCHLWDKHLCEK
Trigger: CTTTTCACAGAGGTGTTTGTCCCAGAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTCTCTCCCTGCTCGGAGCCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490823.5
CDS TCA 72 bp GGAAGTCAGCAACATGGCCAGGAGCCATTGAGCCCATaGAGGCACAGGGGGCTCCGAGCAGGGAGAGAACGG +
Preference number: 6 (lower is better)
Translates to: GSQQHGQEPLSP*RHRGLRAGRER
Trigger: CCGTTCTCTCCCTGCTCGGAGCCCCCTGTGCCTTCATGGGCTCAATGGCTCCTGGCCATGTTGCTGACTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260598.10
CDS GCA 72 bp TCTGGAGGCTGCCTGGTGTTGTGTGCGTCTATCCGCTaGAGCATCTTCACCTGCTCCGATGCGTTCCGGCCC +
Preference number: 6 (lower is better)
Translates to: SGGCLVLCASIR*SIFTCSDAFRP
Trigger: GGGCCGGAACGCATCGGAGCAGGTGAAGATGCTGCAGCGGATAGACGCACACAACACCAGGCAGCCTCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS GCA 72 bp ACACTTCTTGCCGGCCACCTGGCACCCGAATCTCAGTaGTTCCTGCACGCTCCTCCCCTGGGAGAGGCTGAA +
Preference number: 6 (lower is better)
Translates to: TLLAGHLAPESQ*FLHAPPLGEAE
Trigger: TTCAGCCTCTCCCAGGGGAGGAGCGTGCAGGAAGCACTGAGATTCGGGTGCCAGGTGGCCGGCAAGAAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS GCA 72 bp CGAGCAGGGAGAGAACGGTGCAGGAGTTGGACGCGTTaGCTCCGCGCTGCCATCTCTGGGACAAACACCTCT +
Preference number: 6 (lower is better)
Translates to: RAGRERCRSWTR*LRAAISGTNTS
Trigger: AGAGGTGTTTGTCCCAGAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTCTCTCCCTGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490823.5
CDS CAA 72 bp CCGAGCAGGGAGAGAACGGTGCAGGAGTTGGACGCGTaGCCTCCGCGCTGCCATCTCTGGGACAAACACCTT +
Preference number: 6 (lower is better)
Translates to: PSRERTVQELDA*PPRCHLWDKHL
Trigger: AAGGTGTTTGTCCCAGAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTCTCTCCCTGCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
CDS CAA 90 bp AGCGCGGCTAAGCGATCTCGAGAATGCAAAGAGAAAATGCGCTACTaGCCCCGCACTCTCCTGCACCTGCGTCTCCGACTCCCGACCCGG +
Preference number: 6 (lower is better)
Translates to: SAAKRSRECKEKMRY*PRTLLHLRLRLPTR
Trigger: CCGGGTCGGGAGTCGGAGACGCAGGTGCAGGAGAGTGCGGGGCAAGTAGCGCATTTTCTCTTTGCATTCTCGAGATCGCTTAGCCGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000490823.5
CDS CAA 90 bp GAAAGCCAACCCAGAGGTCTTGGTCCCCGGTCTTCCCGTAGCAGGTaGCCTGGGCCTGCAGATGGCAACGCCTCCCACTTCTCAGCCTTA +
Preference number: 6 (lower is better)
Translates to: ESQPRGLGPRSSRSR*PGPADGNASHFSAL
Trigger: TAAGGCTGAGAAGTGGGAGGCGTTGCCATCTGCAGGCCCAGGCAACCTGCTACGGGAAGACCGGGGACCAAGACCTCTGGGTTGGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
CDS CAA 90 bp ACCTCCACGGACACCCGGATCTTCTGCTCTGGAGGCTGCCTGGTGTaGTGTGCGTCTATCCGCTGCAGCATCTTCACCTGCTCCGATGCG +
Preference number: 6 (lower is better)
Translates to: TSTDTRIFCSGGCLV*CASIRCSIFTCSDA
Trigger: CGCATCGGAGCAGGTGAAGATGCTGCAGCGGATAGACGCACACAACACCAGGCAGCCTCCAGAGCAGAAGATCCGGGTGTCCGTGGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS CAA 90 bp ACCTGCTCTCACACGATGCCATCAAAGCCCTGCAGGCCACACTTCTaGCCGGCCACCTGGCACCCGAATCTCAGTGCTTCCTGCACGCTC +
Preference number: 6 (lower is better)
Translates to: TCSHTMPSKPCRPHF*PATWHPNLSASCTL
Trigger: GAGCGTGCAGGAAGCACTGAGATTCGGGTGCCAGGTGGCCGGCAAGAAGTGTGGCCTGCAGGGCTTTGATGGCATCGTGTGAGAGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS GCA 72 bp CGAGCAGGGAGAGAACGGTGCAGGAGTTGGACGCGTTaGCTCCGCGCTGCCATCTCTGGGACAAACACCTTA +
Preference number: 6 (lower is better)
Translates to: RAGRERCRSWTR*LRAAISGTNTL
Trigger: TAAGGTGTTTGTCCCAGAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTCTCTCCCTGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
CDS GCA 72 bp ACCTCCACGGACACCCGGATCTTCTGCTCTGGAGGCTaGCTGGTGTTGTGTGCGTCTATCCGCTGCAGCATC +
Preference number: 6 (lower is better)
Translates to: TSTDTRIFCSGG*LVLCASIRCSI
Trigger: GATGCTGCAGCGGATAGACGCACACAACACCAGGCAGCCTCCAGAGCAGAAGATCCGGGTGTCCGTGGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS GCA 72 bp CGTGGCTTCTCCACCTCCACGGACACCCGGATCTTCTaGTCTGGAGGCTGCCTGGTGTTGTGTGCGTCTATC +
Preference number: 6 (lower is better)
Translates to: RGFSTSTDTRIF*SGGCLVLCASI
Trigger: GATAGACGCACACAACACCAGGCAGCCTCCAGAGCAGAAGATCCGGGTGTCCGTGGAGGTGGAGAAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS GCA 72 bp ATGGTGTGTGAGGAGCCGGCACCTGCTCTCACACGATaGCATCAAAGCCCTGCAGGCCACACTTCTTGCCGG +
Preference number: 6 (lower is better)
Translates to: MVCEEPAPALTR*HQSPAGHTSCR
Trigger: CCGGCAAGAAGTGTGGCCTGCAGGGCTTTGATGGCATCGTGTGAGAGCAGGTGCCGGCTCCTCACACACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS CCA 72 bp CTTCTCCACCTCCACGGACACCCGGATCTTCTGCTCTaGAGGCTGCCTGGTGTTGTGTGCGTCTATCCGCTG +
Preference number: 6 (lower is better)
Translates to: LLHLHGHPDLLL*RLPGVVCVYPL
Trigger: CAGCGGATAGACGCACACAACACCAGGCAGCCTCCAGAGCAGAAGATCCGGGTGTCCGTGGAGGTGGAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS CCA 72 bp GGTGTCTCCAGCTCCCAGTGTATCCACCACGCGGGGTaGCGGGAAAGCATCCGAGTGGAGCAATTTGCCATC +
Preference number: 6 (lower is better)
Translates to: GVSSSQCIHHAG*RESIRVEQFAI
Trigger: GATGGCAAATTGCTCCACTCGGATGCTTTCCCGCCACCCCGCGTGGTGGATACACTGGGAGCTGGAGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS CAA 90 bp GGGGTGCAAGCAAAGGGGGCTGGGAGAGAACTGGGAATCACAGTCTaGCCACAGGCAGTGCAACAGGGCAGGAGATGCAGGAGTGCAGAG +
Preference number: 6 (lower is better)
Translates to: GVQAKGAGRELGITV*PQAVQQGRRCRSAE
Trigger: CTCTGCACTCCTGCATCTCCTGCCCTGTTGCACTGCCTGTGGCAAGACTGTGATTCCCAGTTCTCTCCCAGCCCCCTTTGCTTGCACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469936.5
CDS TCA 72 bp AGGCGATGCAGCCGCAATGGTAGTCTCCATGGTGTGTaGGGAGCCGGCACCTGCTCTCACACGATGCCATCA +
Preference number: 6 (lower is better)
Translates to: RRCSRNGSLHGV*GAGTCSHTMPS
Trigger: TGATGGCATCGTGTGAGAGCAGGTGCCGGCTCCTCACACACCATGGAGACTACCATTGCGGCTGCATCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS TCA 72 bp CAAAATCAGCAACATGGCCAGGAGCCATTGAGCCCATaGAGGCACAGGGGGCTCCGAGCAGGGAGAGAACGG +
Preference number: 6 (lower is better)
Translates to: QNQQHGQEPLSP*RHRGLRAGRER
Trigger: CCGTTCTCTCCCTGCTCGGAGCCCCCTGTGCCTTCATGGGCTCAATGGCTCCTGGCCATGTTGCTGATTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260599.10
ENST00000429697.1
ENST00000490823.5
CDS GCA 72 bp AGAACGGTGCAGGAGTTGGACGCGTTGCCTCCGCGCTaGCATCTCTGGGACAAACACCTTATCTCCGAGTCC +
Preference number: 6 (lower is better)
Translates to: RTVQELDALPPR*HLWDKHLISES
Trigger: GGACTCGGAGATAAGGTGTTTGTCCCAGAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
CDS GCA 72 bp CCGGATCTTCTGCTCTGGAGGCTGCCTGGTGTTGTGTaGGTCTATCCGCTGCAGCATCTTCACCTGCTCCGA +
Preference number: 6 (lower is better)
Translates to: PDLLLWRLPGVV*VYPLQHLHLLR
Trigger: TCGGAGCAGGTGAAGATGCTGCAGCGGATAGACGCACACAACACCAGGCAGCCTCCAGAGCAGAAGATCCGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS GCA 72 bp ACACGATGCCATCAAAGCCCTGCAGGCCACACTTCTTaGCGGCCACCTGGCACCCGAATCTCAGTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: TRCHQSPAGHTS*RPPGTRISVLP
Trigger: AGGAAGCACTGAGATTCGGGTGCCAGGTGGCCGGCAAGAAGTGTGGCCTGCAGGGCTTTGATGGCATCGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000464371.1
ENST00000490823.5
CDS CCA 72 bp GTCTCCGTAGCCAAACAGCTGGAAGAGCTCCTCTCGTaGCTTCTCCACCTCCACGGACACCCGGATCTTCTG +
Preference number: 6 (lower is better)
Translates to: VSVAKQLEELLS*LLHLHGHPDLL
Trigger: CAGAAGATCCGGGTGTCCGTGGAGGTGGAGAAGCCACGAGAGGAGCTCTTCCAGCTGTTTGGCTACGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS CCA 72 bp AGGCAGGGGTGCAAGCAAAGGGGGCTGGGAGAGAACTaGGAATCACAGTCTTGCCACAGGCAGTGCAACAGG +
Preference number: 6 (lower is better)
Translates to: RQGCKQRGLGEN*ESQSCHRQCNR
Trigger: CCTGTTGCACTGCCTGTGGCAAGACTGTGATTCCCAGTTCTCTCCCAGCCCCCTTTGCTTGCACCCCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469936.5
CDS CAA 72 bp GACACCCGGATCTTCTGCTCTGGAGGCTGCCTGGTGTaGTGTGCGTCTATCCGCTGCAGCATCTTCACCTGC +
Preference number: 6 (lower is better)
Translates to: DTRIFCSGGCLV*CASIRCSIFTC
Trigger: GCAGGTGAAGATGCTGCAGCGGATAGACGCACACAACACCAGGCAGCCTCCAGAGCAGAAGATCCGGGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS CAA 72 bp GCAAAGGGGGCTGGGAGAGAACTGGGAATCACAGTCTaGCCACAGGCAGTGCAACAGGGCAGGAGATGCAGG +
Preference number: 6 (lower is better)
Translates to: AKGAGRELGITV*PQAVQQGRRCR
Trigger: CCTGCATCTCCTGCCCTGTTGCACTGCCTGTGGCAAGACTGTGATTCCCAGTTCTCTCCCAGCCCCCTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469936.5
CDS CAA 90 bp GGCAGGCTCGTGTCATGGAGCACAATGGTACGGTTGCCATTGGAGTaGTTGATGATGCAGCAGGAGCTGGGGGTGTCCCCCTTGCTCTGC +
Preference number: 6 (lower is better)
Translates to: GRLVSWSTMVRLPLE*LMMQQELGVSPLLC
Trigger: GCAGAGCAAGGGGGACACCCCCAGCTCCTGCTGCATCATCAACAACTCCAATGGCAACCGTACCATTGTGCTCCATGACACGAGCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000429697.1
ENST00000464371.1
CDS CAA 90 bp AGGCTCGTGTCATGGAGCACAATGGTACGGTTGCCATTGGAGTTGTaGATGATGCAGCAGGAGCTGGGGGTGTCCCCCTTGCTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: RLVSWSTMVRLPLEL*MMQQELGVSPLLCQ
Trigger: CTGGCAGAGCAAGGGGGACACCCCCAGCTCCTGCTGCATCATCAACAACTCCAATGGCAACCGTACCATTGTGCTCCATGACACGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000429697.1
ENST00000464371.1
CDS CAA 90 bp AGGGCTCATGAACCAGCTCTTATCTCCGAGTCCTCCTTAGGGTACTaGTCCACCAGGCTGATGACGTCCAGCACCACTAGCCCCACGCAC +
Preference number: 6 (lower is better)
Translates to: RAHEPALISESSLGY*STRLMTSSTTSPTH
Trigger: GTGCGTGGGGCTAGTGGTGCTGGACGTCATCAGCCTGGTGGACAAGTACCCTAAGGAGGACTCGGAGATAAGAGCTGGTTCATGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490823.5
CDS GCA 72 bp CAAAGGGGGCTGGGAGAGAACTGGGAATCACAGTCTTaGCACAGGCAGTGCAACAGGGCAGGAGATGCAGGA +
Preference number: 6 (lower is better)
Translates to: QRGLGENWESQS*HRQCNRAGDAG
Trigger: TCCTGCATCTCCTGCCCTGTTGCACTGCCTGTGGCAAGACTGTGATTCCCAGTTCTCTCCCAGCCCCCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469936.5
CDS GCA 72 bp AGAACGGTGCAGGAGTTGGACGCGTTGCCTCCGCGCTaGCATCTCTGGGACAAACACCTCTGTGAAAAGGAC +
Preference number: 6 (lower is better)
Translates to: RTVQELDALPPR*HLWDKHLCEKD
Trigger: GTCCTTTTCACAGAGGTGTTTGTCCCAGAGATGGCAGCGCGGAGGCAACGCGTCCAACTCCTGCACCGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490823.5
CDS CAA 90 bp CATCTCTGGGACAAACACCTTATCTCCGAGTCCTCCTTAGGGTACTaGTCCACCAGGCTGATGACGTCCAGCACCACTAGCCCCACGCAC +
Preference number: 6 (lower is better)
Translates to: HLWDKHLISESSLGY*STRLMTSSTTSPTH
Trigger: GTGCGTGGGGCTAGTGGTGCTGGACGTCATCAGCCTGGTGGACAAGTACCCTAAGGAGGACTCGGAGATAAGGTGTTTGTCCCAGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
CDS CAA 90 bp ACATCTGGCAGGCTCGTGTCATGGAGCACAATGGTACGGTTGCCATaGGAGTTGTTGATGATGCAGCAGGAGCTGGGGGTGTCCCCCTTG +
Preference number: 6 (lower is better)
Translates to: TSGRLVSWSTMVRLP*ELLMMQQELGVSPL
Trigger: CAAGGGGGACACCCCCAGCTCCTGCTGCATCATCAACAACTCCAATGGCAACCGTACCATTGTGCTCCATGACACGAGCCTGCCAGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000429697.1
ENST00000464371.1
CDS CAA 90 bp GCAGACACATCTGGCAGGCTCGTGTCATGGAGCACAATGGTACGGTaGCCATTGGAGTTGTTGATGATGCAGCAGGAGCTGGGGGTGTCC +
Preference number: 6 (lower is better)
Translates to: ADTSGRLVSWSTMVR*PLELLMMQQELGVS
Trigger: GGACACCCCCAGCTCCTGCTGCATCATCAACAACTCCAATGGCAACCGTACCATTGTGCTCCATGACACGAGCCTGCCAGATGTGTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000429697.1
ENST00000464371.1
CDS GCA 72 bp AGCGATCTCGAGAATGCAAAGAGAAAATGCGCTACTTaGCCCGCACTCTCCTGCACCTGCGTCTCCGACTCC +
Preference number: 6 (lower is better)
Translates to: SDLENAKRKCAT*PALSCTCVSDS
Trigger: GGAGTCGGAGACGCAGGTGCAGGAGAGTGCGGGGCAAGTAGCGCATTTTCTCTTTGCATTCTCGAGATCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000490823.5
CDS CCA 72 bp TGGTCTGGACCTCCAAAAGGAGTGGGGAGAGGGTGCTaGAGCACACGAGCCTCTAAGAGAAGAAGAGTCCTG +
Preference number: 6 (lower is better)
Translates to: WSGPPKGVGRGC*STRASKRRRVL
Trigger: CAGGACTCTTCTTCTCTTAGAGGCTCGTGTGCTCCAGCACCCTCTCCCCACTCCTTTTGGAGGTCCAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464371.1
CDS TCA 72 bp CACACGACCATACAAGCCCCTCAAGGCTTCCTCTGCTaGCTGGAACCCCAAGTGCTTGGCCACATCTTTGCT +
Preference number: 6 (lower is better)
Translates to: HTTIQAPQGFLC*LEPQVLGHIFA
Trigger: AGCAAAGATGTGGCCAAGCACTTGGGGTTCCAGTCAGCAGAGGAAGCCTTGAGGGGCTTGTATGGTCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS GCA 72 bp CCCCTCAAGGCTTCCTCTGCTGACTGGAACCCCAAGTaGTTGGCCACATCTTTGCTGACAAACACCACGTCT +
Preference number: 6 (lower is better)
Translates to: PLKASSADWNPK*LATSLLTNTTS
Trigger: AGACGTGGTGTTTGTCAGCAAAGATGTGGCCAAGCACTTGGGGTTCCAGTCAGCAGAGGAAGCCTTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000490823.5
CDS CAA 72 bp AAGCGATCTCGAGAATGCAAAGAGAAAATGCGCTACTaGCCCCGCACTCTCCTGCACCTGCGTCTCCGACTC +
Preference number: 6 (lower is better)
Translates to: KRSRECKEKMRY*PRTLLHLRLRL
Trigger: GAGTCGGAGACGCAGGTGCAGGAGAGTGCGGGGCAAGTAGCGCATTTTCTCTTTGCATTCTCGAGATCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000490823.5
CDS CAA 72 bp TCATGGAGCACAATGGTACGGTTGCCATTGGAGTTGTaGATGATGCAGCAGGAGCTGGGGGTGTCCCCCTTG +
Preference number: 6 (lower is better)
Translates to: SWSTMVRLPLEL*MMQQELGVSPL
Trigger: CAAGGGGGACACCCCCAGCTCCTGCTGCATCATCAACAACTCCAATGGCAACCGTACCATTGTGCTCCATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000429697.1
ENST00000464371.1
CDS CAA 72 bp AGGCTCGTGTCATGGAGCACAATGGTACGGTTGCCATaGGAGTTGTTGATGATGCAGCAGGAGCTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: RLVSWSTMVRLP*ELLMMQQELGV
Trigger: CACCCCCAGCTCCTGCTGCATCATCAACAACTCCAATGGCAACCGTACCATTGTGCTCCATGACACGAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000429697.1
ENST00000464371.1
CDS CAA 72 bp GAACCAGCTCTTATCTCCGAGTCCTCCTTAGGGTACTaGTCCACCAGGCTGATGACGTCCAGCACCACTAGC +
Preference number: 6 (lower is better)
Translates to: EPALISESSLGY*STRLMTSSTTS
Trigger: GCTAGTGGTGCTGGACGTCATCAGCCTGGTGGACAAGTACCCTAAGGAGGACTCGGAGATAAGAGCTGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490823.5
CDS CAA 72 bp GACAAACACCTTATCTCCGAGTCCTCCTTAGGGTACTaGTCCACCAGGCTGATGACGTCCAGCACCACTAGC +
Preference number: 6 (lower is better)
Translates to: DKHLISESSLGY*STRLMTSSTTS
Trigger: GCTAGTGGTGCTGGACGTCATCAGCCTGGTGGACAAGTACCCTAAGGAGGACTCGGAGATAAGGTGTTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
CDS CAA 72 bp TCTGGCAGGCTCGTGTCATGGAGCACAATGGTACGGTaGCCATTGGAGTTGTTGATGATGCAGCAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: SGRLVSWSTMVR*PLELLMMQQEL
Trigger: CAGCTCCTGCTGCATCATCAACAACTCCAATGGCAACCGTACCATTGTGCTCCATGACACGAGCCTGCCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260598.10
ENST00000429697.1
ENST00000464371.1
CDS CCA 72 bp GATGCGTTCCGGCCCTCAATGTGGATCCACTTGAACTaGGTCAGATCAACCTTCTCAAAGTCTGTAGCAGAC +
Preference number: 6 (lower is better)
Translates to: DAFRPSMWIHLN*VRSTFSKSVAD
Trigger: GTCTGCTACAGACTTTGAGAAGGTTGATCTGACCCAGTTCAAGTGGATCCACATTGAGGGCCGGAACGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000469936.5
ENST00000490823.5
CDS CAA 72 bp TGCTCCGATGCGTTCCGGCCCTCAATGTGGATCCACTaGAACTGGGTCAGATCAACCTTCTCAAAGTCTGTA +
Preference number: 6 (lower is better)
Translates to: CSDAFRPSMWIH*NWVRSTFSKSV
Trigger: TACAGACTTTGAGAAGGTTGATCTGACCCAGTTCAAGTGGATCCACATTGAGGGCCGGAACGCATCGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260598.10
ENST00000260599.10
ENST00000429697.1
ENST00000464371.1
ENST00000469936.5
ENST00000490823.5
CDS TCA 72 bp GCCTCCGCGCTGCCATCTCTGGGACAAACACCTCTGTaGAAAGGACTTCTGGTAAACTCCTCTTGGAATTTA +
Preference number: 6 (lower is better)
Translates to: ASALPSLGQTPL*KGLLVNSSWNL
Trigger: TAAATTCCAAGAGGAGTTTACCAGAAGTCCTTTTCACAGAGGTGTTTGTCCCAGAGATGGCAGCGCGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490823.5