Pregenerated sensors for KHDRBS2 (Homo sapiens)
Ensembl gene IDs: ENSG00000112232Ensembl transcript IDs: ENST00000281156.5, ENST00000675091.1
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTTCAATATCTACCATAGGGGTGTTCCCTGTATCCCCCTCTGGCTaGCCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGGTTGTGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: PSISTIGVFPVSPSG*PLRWCLQARAGCGP Trigger: TGGGCCACAACCCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATACAGGGAACACCCCTATGGTAGATATTGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| 3UTR TCA 90 bp | GACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATaGATTGTCTTTGAGGTGAGGTCACAGGTGGGAAGGACCTTCAAT | + |
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Preference number: 1 (lower is better) Translates to: DYYLSCCCLCGDHRL*IVFEVRSQVGRTFN Trigger: ATTGAAGGTCCTTCCCACCTGTGACCTCACCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| 3UTR-3UTR TCA 90 bp | ATTGTCTTTGAGGTGAGGTCACAGGTGGGAAGGACCTTCAATATCTACCATAGGGTATCCCCCTCTGGCTaGCCTTTGCGGTGGTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: IVFEVRSQVGRTFNIYHRVSPSG*PLRWCL Trigger: AAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATAC...CCTATGGTAGATATTGAAGGTCCTTCCCACCTGTGACCTCACCTCAAAGACAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| 3UTR-3UTR TCA 90 bp | ATTGTCTTTGAGGTGAGGTCACAGGTGGGAAGGACCTTCAATATCTACCATAGGGAATTGTCTTTGAGGTaGGGTCACAGGTGGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: IVFEVRSQVGRTFNIYHRELSLR*GHRWEG Trigger: TCCTTCCCACCTGTGACCTCACCTCAAAGACAATTC...CCTATGGTAGATATTGAAGGTCCTTCCCACCTGTGACCTCACCTCAAAGACAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| 3UTR-3UTR CCA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTCCCTGTATCCCCCTCTaGCTGACCTTTGCGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: LLATLNKVSASWLRLKICPCIPL*LTFAVV Trigger: CACCACCGCAAAGGTCAGCCAGAGGGGGATACAGGG...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| 3UTR-3UTR TCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGGCTATGAATTGTCTTTaGGGTGAGGTCACAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: TCLVAVYVETTGYELSLRAMNCL*GEVTGG Trigger: CCCACCTGTGACCTCACCTCAAAGACAATTCATAGC...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| 3UTR-3UTR GCA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATCCTCTGGCTGACCTTTaGGGTGGTGCCTTCAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNPLADL*GGAFKL Trigger: TAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGG...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| 3UTR-3UTR TCA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTGAATTGTCTTTGAGGTaGGGTCACAGGTGGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LLATLNKVSASWLRLKICELSLR*GHRWEG Trigger: TCCTTCCCACCTGTGACCTCACCTCAAAGACAATTC...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| 3UTR-3UTR TCA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTGCTATGAATTGTCTTTaGGGTGAGGTCACAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LLATLNKVSASWLRLKICAMNCL*GEVTGG Trigger: CCCACCTGTGACCTCACCTCAAAGACAATTCATAGC...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| 3UTR-3UTR TCA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTGGAGACCACAGGCTATaGATTGTCTTTGAGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LLATLNKVSASWLRLKICGDHRL*IVFEVR Trigger: CCTCACCTCAAAGACAATTCATAGCCTGTGGTCTCC...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| 3UTR-3UTR GCA 90 bp | ATTGTCTTTGAGGTGAGGTCACAGGTGGGAAGGACCTTCAATATCTACCATAGGTATTACTTGTCTTGTTaGTGTTTATGTGGAGACCAC | + |
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Preference number: 2 (lower is better) Translates to: IVFEVRSQVGRTFNIYHRYYLSC*CLCGDH Trigger: GTGGTCTCCACATAAACAGCAACAAGACAAGTAATA...CCTATGGTAGATATTGAAGGTCCTTCCCACCTGTGACCTCACCTCAAAGACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| 3UTR-3UTR CCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGTATTCAGGCACATTaGCTGTCTATCTTCTTCATC | + |
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Preference number: 2 (lower is better) Translates to: TCLVAVYVETTGYELSLRSIQAH*LSIFFI Trigger: GATGAAGAAGATAGACAGCCAATGTGCCTGAATACT...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| 3UTR-3UTR GCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGTATTACTTGTCTTGTTaGTGTTTATGTGGAGACCAC | + |
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Preference number: 2 (lower is better) Translates to: TCLVAVYVETTGYELSLRYYLSC*CLCGDH Trigger: GTGGTCTCCACATAAACAGCAACAAGACAAGTAATA...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| 3UTR TCA 72 bp | TCTACCATAGGGGTGTTCCCTGTATCCCCCTCTGGCTaGCCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGGT | + |
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Preference number: 3 (lower is better) Translates to: STIGVFPVSPSG*PLRWCLQARAG Trigger: ACCCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATACAGGGAACACCCCTATGGTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| 3UTR TCA 72 bp | TTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATaGATTGTCTTTGAGGTGAGGTCACAGGTGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: LSCCCLCGDHRL*IVFEVRSQVGR Trigger: CCTTCCCACCTGTGACCTCACCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| 3UTR TCA 72 bp | CTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTaGGGTGAGGTCACAGGTGGGAAGGACCTTCAATAT | + |
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Preference number: 3 (lower is better) Translates to: LFMWRPQAMNCL*GEVTGGKDLQY Trigger: ATATTGAAGGTCCTTCCCACCTGTGACCTCACCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| 3UTR-3UTR CAA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGCTATTACTTGTCTTGTaGCTGTTTATGTGGAGACCA | + |
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Preference number: 3 (lower is better) Translates to: TCLVAVYVETTGYELSLRLLLVL*LFMWRP Trigger: TGGTCTCCACATAAACAGCAACAAGACAAGTAATAG...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| 3UTR-3UTR CAA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATGGACTATTACTTGTCTaGTTGCTGTTTATGTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNGLLLV*LLFMWR Trigger: TCTCCACATAAACAGCAACAAGACAAGTAATAGTCC...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CCA 90 bp | CCCCCTCTGGCTGACCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGGTTGTGGCCACGCAGGCAGGGTCTTaGGGCAGCGCCTGGCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: PPLADLCGGAFKLERVVATQAGS*GSAWLP Trigger: CGGGAGCCAGGCGCTGCCCCAAGACCCTGCCTGCGT...GGCCACAACCCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR GCA 90 bp | TCCCTGTATCCCCCTCTGGCTGACCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGTCCTGGCACTGTTGGTaGCCCCCGGGCTCGAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SLYPPLADLCGGAFKLERSWHCW*PPGSRG Trigger: ACCCCTCGAGCCCGGGGGGCACCAACAGTGCCAGGA...CCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATACAGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR GCA 90 bp | TCCCTGTATCCCCCTCTGGCTGACCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGGGCTGGAGGAGGAGGTaGCCTGTATCCTGGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: SLYPPLADLCGGAFKLERGWRRR*PVSWHC Trigger: ACAGTGCCAGGATACAGGGCACCTCCTCCTCCAGCC...CCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATACAGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR CCA 90 bp | TCCCTGTATCCCCCTCTGGCTGACCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGTCTGTGCGTCCTCACTaGCCCATGCACCCAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: SLYPPLADLCGGAFKLERSVRPH*PMHPAP Trigger: AGGTGCTGGGTGCATGGGCCAGTGAGGACGCACAGA...CCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATACAGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR GCA 90 bp | TCCCTGTATCCCCCTCTGGCTGACCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGCCTCTGGCTGACCTTTaGGGTGGTGCCTTCAAGCTA | + |
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Preference number: 4 (lower is better) Translates to: SLYPPLADLCGGAFKLERPLADL*GGAFKL Trigger: TAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGG...CCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATACAGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR GCA 90 bp | TCCCTGTATCCCCCTCTGGCTGACCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGGGCCCATTCTTCTGGTaGGTAGCTGTCATAGGCATC | + |
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Preference number: 4 (lower is better) Translates to: SLYPPLADLCGGAFKLERGPFFW*VAVIGI Trigger: GATGCCTATGACAGCTACGCACCAGAAGAATGGGCC...CCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATACAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR CCA 90 bp | CCCCCTCTGGCTGACCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGGTTGTGGCCCAAGGAGTTTCCTCTTaGTCCAAGCAATTTCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PPLADLCGGAFKLERVVAQGVSS*SKQFPH Trigger: GTGGGGAAATTGCTTGGACCAAGAGGAAACTCCTTG...GGCCACAACCCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR CCA 90 bp | TCCCTGTATCCCCCTCTGGCTGACCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGATAAGCTTCATGGGCTaGAGGAGGAGGTGCCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: SLYPPLADLCGGAFKLERISFMG*RRRCPV Trigger: TACAGGGCACCTCCTCCTCCAGCCCATGAAGCTTAT...CCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATACAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR GCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGCCCCGCGCCCACACCTaGCCGTCCCTTCCGTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: TCLVAVYVETTGYELSLRPRAHT*PSLPSS Trigger: GGACGACGGAAGGGACGGGCAGGTGTGGGCGCGGGG...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CCA 90 bp | TCCCTGTATCCCCCTCTGGCTGACCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGAGCTCATCACTCAAGTaGGCATATTTGGCTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SLYPPLADLCGGAFKLERSSSLK*AYLASP Trigger: TGGGGAAGCCAAATATGCCCACTTGAGTGATGAGCT...CCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATACAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR CCA 90 bp | TCCCTGTATCCCCCTCTGGCTGACCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGTCAAGTGGGCATATTTaGCTTCCCCACTCTTCCTTA | + |
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Preference number: 4 (lower is better) Translates to: SLYPPLADLCGGAFKLERSSGHI*LPHSSL Trigger: TAAGGAAGAGTGGGGAAGCCAAATATGCCCACTTGA...CCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATACAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR CCA 90 bp | CCCCCTCTGGCTGACCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGGTTGTGGCCAGTATTCAGGCACATTaGCTGTCTATCTTCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: PPLADLCGGAFKLERVVASIQAH*LSIFFI Trigger: GATGAAGAAGATAGACAGCCAATGTGCCTGAATACT...GGCCACAACCCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR GCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGCATGCACCCAGCACCTaGGACTCCCGCCGTCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TCLVAVYVETTGYELSLRHAPST*DSRRRA Trigger: AGCCCGACGGCGGGAGTCGCAGGTGCTGGGTGCATG...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR GCA 90 bp | CCCCCTCTGGCTGACCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGGTTGTGGCCTTGAACTTTGGATACTaGTTGACAGGAATCAGTACT | + |
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Preference number: 4 (lower is better) Translates to: PPLADLCGGAFKLERVVALNFGY*LTGIST Trigger: AGTACTGATTCCTGTCAAGCAGTATCCAAAGTTCAA...GGCCACAACCCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR GCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGTCCTGGCACTGTTGGTaGCCCCCGGGCTCGAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: TCLVAVYVETTGYELSLRSWHCW*PPGSRG Trigger: ACCCCTCGAGCCCGGGGGGCACCAACAGTGCCAGGA...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR TCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGACCCCCACGGCCCCTTaGAGGAGCTGTGGGAGCTAT | + |
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Preference number: 4 (lower is better) Translates to: TCLVAVYVETTGYELSLRTPTAP*RSCGSY Trigger: ATAGCTCCCACAGCTCCTTCAAGGGGCCGTGGGGGT...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR GCA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATCATGCACCCAGCACCTaGGACTCCCGCCGTCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNHAPST*DSRRRA Trigger: AGCCCGACGGCGGGAGTCGCAGGTGCTGGGTGCATG...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR GCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGGGCGAGGGATCTCTGTaGGTCCTCACTGGCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: TCLVAVYVETTGYELSLRGEGSL*VLTGPC Trigger: GCATGGGCCAGTGAGGACGCACAGAGATCCCTCGCC...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CCA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTTCTTGGGGCAGCGCCTaGCTCCCGCGCTGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LLATLNKVSASWLRLKICSWGSA*LPRCSS Trigger: GGAGGAGCAGCGCGGGAGCCAGGCGCTGCCCCAAGA...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CCA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTACGCAGGCAGGGTCTTaGGGCAGCGCCTGGCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: LLATLNKVSASWLRLKICTQAGS*GSAWLP Trigger: CGGGAGCCAGGCGCTGCCCCAAGACCCTGCCTGCGT...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGACCTCGTCCAGGTGGTaGGGGAGGAGGAATGGCACC | + |
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Preference number: 4 (lower is better) Translates to: TCLVAVYVETTGYELSLRTSSRW*GRRNGT Trigger: GGTGCCATTCCTCCTCCCCCACCACCTGGACGAGGT...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR GCA 90 bp | ATTGTCTTTGAGGTGAGGTCACAGGTGGGAAGGACCTTCAATATCTACCATAGGGGTAGGGACACCTCTTaGTACAGGTGGCACTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: IVFEVRSQVGRTFNIYHRGRDTS*YRWHWK Trigger: CTTCCAGTGCCACCTGTAGCAAGAGGTGTCCCTACC...CCTATGGTAGATATTGAAGGTCCTTCCCACCTGTGACCTCACCTCAAAGACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR CCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGTCTGTGCGTCCTCACTaGCCCATGCACCCAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: TCLVAVYVETTGYELSLRSVRPH*PMHPAP Trigger: AGGTGCTGGGTGCATGGGCCAGTGAGGACGCACAGA...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CCA 90 bp | TCCCTGTATCCCCCTCTGGCTGACCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGCACAAAATTGAACTTTaGATACTGCTTGACAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: SLYPPLADLCGGAFKLERHKIEL*ILLDRN Trigger: ATTCCTGTCAAGCAGTATCCAAAGTTCAATTTTGTG...CCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATACAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR TCA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGCTTCCCCGAGGGGTaGGAACACCTCGTCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNCFPEG*EHLVQV Trigger: CACCTGGACGAGGTGTTCTCACCCCTCGGGGAAGCA...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR GCA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATGGCGAGGGATCTCTGTaGGTCCTCACTGGCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNGEGSL*VLTGPC Trigger: GCATGGGCCAGTGAGGACGCACAGAGATCCCTCGCC...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CCA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATACCTCGTCCAGGTGGTaGGGGAGGAGGAATGGCACC | + |
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Preference number: 4 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNTSSRW*GRRNGT Trigger: GGTGCCATTCCTCCTCCCCCACCACCTGGACGAGGT...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGTGCTACAGGTGGCACTaGAAGCGCTCCACGGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: TCLVAVYVETTGYELSLRCYRWH*KRSTGY Trigger: GTAACCCGTGGAGCGCTTCCAGTGCCACCTGTAGCA...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR CCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGACCTCTTGCTACAGGTaGCACTGGAAGCGCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: TCLVAVYVETTGYELSLRTSCYR*HWKRST Trigger: CGTGGAGCGCTTCCAGTGCCACCTGTAGCAAGAGGT...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR TCA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATGTATCCCCCTCTGGCTaGCCTTTGCGGTGGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNVSPSG*PLRWCL Trigger: AAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATAC...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR TCA 90 bp | ATTGTCTTTGAGGTGAGGTCACAGGTGGGAAGGACCTTCAATATCTACCATAGGGCTATGAATTGTCTTTaGGGTGAGGTCACAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IVFEVRSQVGRTFNIYHRAMNCL*GEVTGG Trigger: CCCACCTGTGACCTCACCTCAAAGACAATTCATAGC...CCTATGGTAGATATTGAAGGTCCTTCCCACCTGTGACCTCACCTCAAAGACAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675091.1 |
||
| CDS-3UTR CCA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATCCCTGTATCCCCCTCTaGCTGACCTTTGCGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNPCIPL*LTFAVV Trigger: CACCACCGCAAAGGTCAGCCAGAGGGGGATACAGGG...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR TCA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTGTATCCCCCTCTGGCTaGCCTTTGCGGTGGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLATLNKVSASWLRLKICVSPSG*PLRWCL Trigger: AAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATAC...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR GCA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTGGCTGGAGGAGGAGGTaGCCTGTATCCTGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLATLNKVSASWLRLKICGWRRR*PVSWHC Trigger: ACAGTGCCAGGATACAGGGCACCTCCTCCTCCAGCC...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR CCA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTAACACCTCGTCCAGGTaGTGGGGGAGGAGGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLATLNKVSASWLRLKICNTSSR*WGRRNG Trigger: GCCATTCCTCCTCCCCCACCACCTGGACGAGGTGTT...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR CCA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATACCTCTTGCTACAGGTaGCACTGGAAGCGCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNTSCYR*HWKRST Trigger: CGTGGAGCGCTTCCAGTGCCACCTGTAGCAAGAGGT...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR GCA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATGGTAGGGACACCTCTTaGTACAGGTGGCACTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNGRDTS*YRWHWK Trigger: CTTCCAGTGCCACCTGTAGCAAGAGGTGTCCCTACC...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR CCA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTTGCTACAGGTGGCACTaGAAGCGCTCCACGGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLATLNKVSASWLRLKICCYRWH*KRSTGY Trigger: GTAACCCGTGGAGCGCTTCCAGTGCCACCTGTAGCA...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR CCA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATATAAGCTTCATGGGCTaGAGGAGGAGGTGCCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNISFMG*RRRCPV Trigger: TACAGGGCACCTCCTCCTCCAGCCCATGAAGCTTAT...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR TCA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGCATGACTCATACGTaGATAAGCTTCCCCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNCMTHT*ISFPRW Trigger: CCACCTGGGGAAGCTTATTCACGTATGAGTCATGCA...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR TCA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATGGAGACCACAGGCTATaGATTGTCTTTGAGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNGDHRL*IVFEVR Trigger: CCTCACCTCAAAGACAATTCATAGCCTGTGGTCTCC...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR GCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGCAGGCTATCTTTCTCTaGCATCAGCTCAGGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: TCLVAVYVETTGYELSLRQAIFL*HQLRQI Trigger: TATTTGCCTGAGCTGATGGCAGAGAAAGATAGCCTG...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR GCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGCTTTTCAATTTCTTCTaGCAAAAGGCGCGACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TCLVAVYVETTGYELSLRLFNFF*QKARRM Trigger: CATGCGTCGCGCCTTTTGGCAGAAGAAATTGAAAAG...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR GCA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTGGCCCATTCTTCTGGTaGGTAGCTGTCATAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLATLNKVSASWLRLKICGPFFW*VAVIGI Trigger: GATGCCTATGACAGCTACGCACCAGAAGAATGGGCC...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR CCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGTCAAGTGGGCATATTTaGCTTCCCCACTCTTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TCLVAVYVETTGYELSLRSSGHI*LPHSSL Trigger: TAAGGAAGAGTGGGGAAGCCAAATATGCCCACTTGA...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR TCA 90 bp | ATTGTCTTTGAGGTGAGGTCACAGGTGGGAAGGACCTTCAATATCTACCATAGGTTTCTGCTAGTTGGTTaGGACTCAAAATCTGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: IVFEVRSQVGRTFNIYHRFLLVG*DSKSVN Trigger: GTTAACAGATTTTGAGTCTCAACCAACTAGCAGAAA...CCTATGGTAGATATTGAAGGTCCTTCCCACCTGTGACCTCACCTCAAAGACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675091.1 |
||
| CDS-3UTR GCA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTAAAAGGCGCGACGCATaGACAAAAGATGGATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLATLNKVSASWLRLKICKRRDA*TKDGSR Trigger: CCTGGATCCATCTTTTGTGCATGCGTCGCGCCTTTT...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR CCA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATCAAGGAGTTTCCTCTTaGTCCAAGCAATTTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNQGVSS*SKQFPH Trigger: GTGGGGAAATTGCTTGGACCAAGAGGAAACTCCTTG...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR CCA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATAGCTCATCACTCAAGTaGGCATATTTGGCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNSSSLK*AYLASP Trigger: TGGGGAAGCCAAATATGCCCACTTGAGTGATGAGCT...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR CCA 90 bp | ATTGTCTTTGAGGTGAGGTCACAGGTGGGAAGGACCTTCAATATCTACCATAGGAAAGTTTCTGCTAGTTaGTTGAGACTCAAAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IVFEVRSQVGRTFNIYHRKVSAS*LRLKIC Trigger: ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTT...CCTATGGTAGATATTGAAGGTCCTTCCCACCTGTGACCTCACCTCAAAGACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675091.1 |
||
| CDS-3UTR TCA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATAGCTTTATCTCTCATTaGTCCTTTGCCCAGGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNSFISH*SFAQDR Trigger: TCTATCCTGGGCAAAGGATCAATGAGAGATAAAGCT...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR TCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGTTTCTGCTAGTTGGTTaGGACTCAAAATCTGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TCLVAVYVETTGYELSLRFLLVG*DSKSVN Trigger: GTTAACAGATTTTGAGTCTCAACCAACTAGCAGAAA...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR GCA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTCTTTTCAATTTCTTCTaGCAAAAGGCGCGACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LLATLNKVSASWLRLKICLFNFF*QKARRM Trigger: CATGCGTCGCGCCTTTTGGCAGAAGAAATTGAAAAG...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR TCA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTAGCTTTATCTCTCATTaGTCCTTTGCCCAGGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLATLNKVSASWLRLKICSFISH*SFAQDR Trigger: TCTATCCTGGGCAAAGGATCAATGAGAGATAAAGCT...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR CCA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGCACAAAATTGAACTTTaGATACTGCTTGACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TCLVAVYVETTGYELSLRHKIEL*ILLDRN Trigger: ATTCCTGTCAAGCAGTATCCAAAGTTCAATTTTGTG...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR GCA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATCATACATACAGTAGCTaGTTGTTTTCAACCCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNHTYSS*LFSTPL Trigger: TAATGGGGTTGAAAACAAGCAGCTACTGTATGTATG...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR GCA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTTTGAACTTTGGATACTaGTTGACAGGAATCAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LLATLNKVSASWLRLKICLNFGY*LTGIST Trigger: AGTACTGATTCCTGTCAAGCAGTATCCAAAGTTCAA...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR CCA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTAAAGTTTCTGCTAGTTaGTTGAGACTCAAAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLATLNKVSASWLRLKICKVSAS*LRLKIC Trigger: ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTT...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS GCA 90 bp | ACCTGCGACTCCCGCCGTCGGGCTGCGTGGCCCCGCGCCCACACCTaGCCGTCCCTTCCGTCGTCCCTCGCTCGCGCAGAGCCCCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TCDSRRRAAWPRAHT*PSLPSSLARAEPRL Trigger: GAGCCGGGGCTCTGCGCGAGCGAGGGACGACGGAAGGGACGGGCAGGTGTGGGCGCGGGGCCACGCAGCCCGACGGCGGGAGTCGCAGGT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS CCA 90 bp | CTGGCCCATGCACCCAGCACCTGCGACTCCCGCCGTCGGGCTGCGTaGCCCCGCGCCCACACCTGCCCGTCCCTTCCGTCGTCCCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LAHAPSTCDSRRRAA*PRAHTCPSLPSSLA Trigger: AGCGAGGGACGACGGAAGGGACGGGCAGGTGTGGGCGCGGGGCCACGCAGCCCGACGGCGGGAGTCGCAGGTGCTGGGTGCATGGGCCAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS GCA 90 bp | CTCACTGGCCCATGCACCCAGCACCTGCGACTCCCGCCGTCGGGCTaGGTGGCCCCGCGCCCACACCTGCCCGTCCCTTCCGTCGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LTGPCTQHLRLPPSG*VAPRPHLPVPSVVP Trigger: AGGGACGACGGAAGGGACGGGCAGGTGTGGGCGCGGGGCCACGCAGCCCGACGGCGGGAGTCGCAGGTGCTGGGTGCATGGGCCAGTGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS GCA 90 bp | CCTCCTCCGCGCGGCGAGGGATCTCTGTGCGTCCTCACTGGCCCATaGACCCAGCACCTGCGACTCCCGCCGTCGGGCTGCGTGGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PPPRGEGSLCVLTGP*TQHLRLPPSGCVAP Trigger: CGGGGCCACGCAGCCCGACGGCGGGAGTCGCAGGTGCTGGGTGCATGGGCCAGTGAGGACGCACAGAGATCCCTCGCCGCGCGGAGGAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS CCA 90 bp | CGCTGCTCCTCCTCCGCGCGGCGAGGGATCTCTGTGCGTCCTCACTaGCCCATGCACCCAGCACCTGCGACTCCCGCCGTCGGGCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RCSSSARRGISVRPH*PMHPAPATPAVGLR Trigger: ACGCAGCCCGACGGCGGGAGTCGCAGGTGCTGGGTGCATGGGCCAGTGAGGACGCACAGAGATCCCTCGCCGCGCGGAGGAGGAGCAGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS GCA 90 bp | TTCATGGGCTGGAGGAGGAGGTGCCCTGTATCCTGGCACTGTTGGTaGCCCCCGGGCTCGAGGGGTAGGGACACCTCTTGCTACAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FMGWRRRCPVSWHCW*PPGSRGRDTSCYRW Trigger: CCACCTGTAGCAAGAGGTGTCCCTACCCCTCGAGCCCGGGGGGCACCAACAGTGCCAGGATACAGGGCACCTCCTCCTCCAGCCCATGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR CAA 90 bp | CCCCCTCTGGCTGACCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGGTTGTGGCCCTCAAGTGGGCATATTaGGCTTCCCCACTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PPLADLCGGAFKLERVVALKWAY*ASPLFL Trigger: AAGGAAGAGTGGGGAAGCCAAATATGCCCACTTGAG...GGCCACAACCCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675091.1 |
||
| CDS-3UTR CAA 90 bp | CCCCCTCTGGCTGACCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGGTTGTGGCCTCAAGGAGTTTCCTCTaGGTCCAAGCAATTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PPLADLCGGAFKLERVVASRSFL*VQAISP Trigger: TGGGGAAATTGCTTGGACCAAGAGGAAACTCCTTGA...GGCCACAACCCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675091.1 |
||
| CDS-3UTR CAA 90 bp | ATTGTCTTTGAGGTGAGGTCACAGGTGGGAAGGACCTTCAATATCTACCATAGGCACCCCCACGGCCCCTaGAAGGAGCTGTGGGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: IVFEVRSQVGRTFNIYHRHPHGP*KELWEL Trigger: TAGCTCCCACAGCTCCTTCAAGGGGCCGTGGGGGTG...CCTATGGTAGATATTGAAGGTCCTTCCCACCTGTGACCTCACCTCAAAGACAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675091.1 |
||
| CDS-3UTR CAA 90 bp | CCCCCTCTGGCTGACCTTTGCGGTGGTGCCTTCAAGCTAGAGCGGGTTGTGGCCATTCCTAAGCCTTCATaGACCACAAACTCTGTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PPLADLCGGAFKLERVVAIPKPS*TTNSVS Trigger: ACTTACAGAGTTTGTGGTCAATGAAGGCTTAGGAAT...GGCCACAACCCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000675091.1 |
||
| CDS-3UTR CAA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATAGCGCGGACTTCGGATaGTCCCCGGGCGAAGCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNSADFG*SPGEAR Trigger: TCGCGCTTCGCCCGGGGACAATCCGAAGTCCGCGCT...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR CAA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTAGCGCGGACTTCGGATaGTCCCCGGGCGAAGCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LLATLNKVSASWLRLKICSADFG*SPGEAR Trigger: TCGCGCTTCGCCCGGGGACAATCCGAAGTCCGCGCT...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
||
| CDS-3UTR CAA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTCACCCCCACGGCCCCTaGAAGGAGCTGTGGGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LLATLNKVSASWLRLKICHPHGP*KELWEL Trigger: TAGCTCCCACAGCTCCTTCAAGGGGCCGTGGGGGTG...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CAA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGGTATTCAGGCACACTTaGTGTTTGGGTCGCATAGCT | + |
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Preference number: 5 (lower is better) Translates to: TCLVAVYVETTGYELSLRVFRHT*CLGRIA Trigger: AGCTATGCGACCCAAACACAAAGTGTGCCTGAATAC...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281156.5 |
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| CDS-3UTR CAA 90 bp | ATTGTCTTTGAGGTGAGGTCACAGGTGGGAAGGACCTTCAATATCTACCATAGGTCTCTCATTGATCCTTaGCCCAGGATAGACATTTTA | + |
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Preference number: 5 (lower is better) Translates to: IVFEVRSQVGRTFNIYHRSLIDP*PRIDIL Trigger: TAAAATGTCTATCCTGGGCAAAGGATCAATGAGAGA...CCTATGGTAGATATTGAAGGTCCTTCCCACCTGTGACCTCACCTCAAAGACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR CAA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATCTCAAGTGGGCATATTaGGCTTCCCCACTCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNLKWAY*ASPLFL Trigger: AAGGAAGAGTGGGGAAGCCAAATATGCCCACTTGAG...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CAA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAACTCTGTAAGTTCTTaGTGTTTGGGTCGCATAGCT | + |
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Preference number: 5 (lower is better) Translates to: TCLVAVYVETTGYELSLRNSVSS*CLGRIA Trigger: AGCTATGCGACCCAAACACAAAGAACTTACAGAGTT...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR CAA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTTCAAGGAGTTTCCTCTaGGTCCAAGCAATTTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: LLATLNKVSASWLRLKICSRSFL*VQAISP Trigger: TGGGGAAATTGCTTGGACCAAGAGGAAACTCCTTGA...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CAA 90 bp | ACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGGGACTATTACTTGTCTaGTTGCTGTTTATGTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: TCLVAVYVETTGYELSLRGLLLV*LLFMWR Trigger: TCTCCACATAAACAGCAACAAGACAAGTAATAGTCC...CCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CAA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATAACTTTGGATACTGCTaGACAGGAATCAGTACTCTT | + |
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Preference number: 5 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNNFGYC*TGISTL Trigger: AAGAGTACTGATTCCTGTCAAGCAGTATCCAAAGTT...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CAA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTCTCTCATTGATCCTTaGCCCAGGATAGACATTTTA | + |
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Preference number: 5 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNSLIDP*PRIDIL Trigger: TAAAATGTCTATCCTGGGCAAAGGATCAATGAGAGA...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CAA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATCTATTACTTGTCTTGTaGCTGTTTATGTGGAGACCA | + |
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Preference number: 5 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNLLLVL*LFMWRP Trigger: TGGTCTCCACATAAACAGCAACAAGACAAGTAATAG...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CAA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTGTAAGTTCTTTGTGTTaGGGTCGCATAGCTGTTATC | + |
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Preference number: 5 (lower is better) Translates to: LLATLNKVSASWLRLKICVSSLC*GRIAVI Trigger: GATAACAGCTATGCGACCCAAACACAAAGAACTTAC...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS-3UTR CAA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTAACTTTGGATACTGCTaGACAGGAATCAGTACTCTT | + |
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Preference number: 5 (lower is better) Translates to: LLATLNKVSASWLRLKICNFGYC*TGISTL Trigger: AAGAGTACTGATTCCTGTCAAGCAGTATCCAAAGTT...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CAA 90 bp | AAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATAATTTCCCCACAAAATaGAACTTTGGATACTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: KGLLLVLLLFMWRPQAMNNFPTK*NFGYCL Trigger: CAAGCAGTATCCAAAGTTCAATTTTGTGGGGAAATT...ATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS-3UTR CAA 90 bp | CTTTTAGCAACCCTAAACAAAGTTTCTGCTAGTTGGTTGAGACTCAAAATCTGTGGACTATTACTTGTCTaGTTGCTGTTTATGTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: LLATLNKVSASWLRLKICGLLLV*LLFMWR Trigger: TCTCCACATAAACAGCAACAAGACAAGTAATAGTCC...ACAGATTTTGAGTCTCAACCAACTAGCAGAAACTTTGTTTAGGGTTGCTAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS CCA 72 bp | GCACCCAGCACCTGCGACTCCCGCCGTCGGGCTGCGTaGCCCCGCGCCCACACCTGCCCGTCCCTTCCGTCG | + |
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Preference number: 6 (lower is better) Translates to: APSTCDSRRRAA*PRAHTCPSLPS Trigger: CGACGGAAGGGACGGGCAGGTGTGGGCGCGGGGCCACGCAGCCCGACGGCGGGAGTCGCAGGTGCTGGGTGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS GCA 72 bp | CCATGCACCCAGCACCTGCGACTCCCGCCGTCGGGCTaGGTGGCCCCGCGCCCACACCTGCCCGTCCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: PCTQHLRLPPSG*VAPRPHLPVPS Trigger: GGAAGGGACGGGCAGGTGTGGGCGCGGGGCCACGCAGCCCGACGGCGGGAGTCGCAGGTGCTGGGTGCATGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS GCA 72 bp | CGCGGCGAGGGATCTCTGTGCGTCCTCACTGGCCCATaGACCCAGCACCTGCGACTCCCGCCGTCGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RGEGSLCVLTGP*TQHLRLPPSGC Trigger: GCAGCCCGACGGCGGGAGTCGCAGGTGCTGGGTGCATGGGCCAGTGAGGACGCACAGAGATCCCTCGCCGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS CCA 72 bp | TCCTCCGCGCGGCGAGGGATCTCTGTGCGTCCTCACTaGCCCATGCACCCAGCACCTGCGACTCCCGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: SSARRGISVRPH*PMHPAPATPAV Trigger: GACGGCGGGAGTCGCAGGTGCTGGGTGCATGGGCCAGTGAGGACGCACAGAGATCCCTCGCCGCGCGGAGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS GCA 72 bp | TGGAGGAGGAGGTGCCCTGTATCCTGGCACTGTTGGTaGCCCCCGGGCTCGAGGGGTAGGGACACCTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: WRRRCPVSWHCW*PPGSRGRDTSC Trigger: GCAAGAGGTGTCCCTACCCCTCGAGCCCGGGGGGCACCAACAGTGCCAGGATACAGGGCACCTCCTCCTCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS CAA 90 bp | CAGCTCAGGCAAATATTTCTCCTCTTCCATAGCGCGGACTTCGGATaGTCCCCGGGCGAAGCGCGAGGTTCCGCTCGCTCGGACGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: QLRQIFLLFHSADFG*SPGEARGSARSDAG Trigger: GCCTGCGTCCGAGCGAGCGGAACCTCGCGCTTCGCCCGGGGACAATCCGAAGTCCGCGCTATGGAAGAGGAGAAATATTTGCCTGAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS CCA 72 bp | TCGAGGGGTAGGGACACCTCTTGCTACAGGTGGCACTaGAAGCGCTCCACGGGTTACAGTGCTTCCCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: SRGRDTSCYRWH*KRSTGYSASPR Trigger: CCTCGGGGAAGCACTGTAACCCGTGGAGCGCTTCCAGTGCCACCTGTAGCAAGAGGTGTCCCTACCCCTCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS CAA 72 bp | CAAATATTTCTCCTCTTCCATAGCGCGGACTTCGGATaGTCCCCGGGCGAAGCGCGAGGTTCCGCTCGCTCG | + |
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Preference number: 6 (lower is better) Translates to: QIFLLFHSADFG*SPGEARGSARS Trigger: CGAGCGAGCGGAACCTCGCGCTTCGCCCGGGGACAATCCGAAGTCCGCGCTATGGAAGAGGAGAAATATTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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| CDS CAA 90 bp | TCTATCTTCTTCATCTTTGCCATCAGGTCCATTCCTAAGCCTTCATaGACCACAAACTCTGTAAGTTCTTTGTGTTTGGGTCGCATAGCT | + |
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Preference number: 6 (lower is better) Translates to: SIFFIFAIRSIPKPS*TTNSVSSLCLGRIA Trigger: AGCTATGCGACCCAAACACAAAGAACTTACAGAGTTTGTGGTCAATGAAGGCTTAGGAATGGACCTGATGGCAAAGATGAAGAAGATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS CAA 72 bp | TTCATCTTTGCCATCAGGTCCATTCCTAAGCCTTCATaGACCACAAACTCTGTAAGTTCTTTGTGTTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: FIFAIRSIPKPS*TTNSVSSLCLG Trigger: ACCCAAACACAAAGAACTTACAGAGTTTGTGGTCAATGAAGGCTTAGGAATGGACCTGATGGCAAAGATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675091.1 |
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| CDS CAA 72 bp | ACAGGAATCAGTACTCTTTCTGAGAGCTTTATGTTTTaGTTGCTGATGACATCAAGATACTTCTTTTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: TGISTLSESFMF*LLMTSRYFFSS Trigger: CGAAGAAAAGAAGTATCTTGATGTCATCAGCAACAAAAACATAAAGCTCTCAGAAAGAGTACTGATTCCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281156.5 ENST00000675091.1 |
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