Pregenerated sensors for KHDRBS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000121774Ensembl transcript IDs: ENST00000307714.12, ENST00000327300.12, ENST00000484270.2, ENST00000492989.1
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATTATTAGTACTATGACTGAAAGATTCTTCATGGCTAAAAAGCTCTaGATCAAACTCAATTCAGGAGGCCTTCCCTCCCCACCACCATCA | + |
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Preference number: 1 (lower is better) Translates to: IISTMTERFFMAKKL*IKLNSGGLPSPPPS Trigger: TGATGGTGGTGGGGAGGGAAGGCCTCCTGAATTGAGTTTGATGCAGAGCTTTTTAGCCATGAAGAATCTTTCAGTCATAGTACTAATAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR TCA 90 bp | AGCTGCAGTGTCCCTTTTTATATCATGCTAGTGTTGAGACATACTTaGCTAACTTGGGAACAGTTCGATATATTGACAACCGTCAACTTA | + |
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Preference number: 1 (lower is better) Translates to: SCSVPFYIMLVLRHT*LTWEQFDILTTVNL Trigger: TAAGTTGACGGTTGTCAATATATCGAACTGTTCCCAAGTTAGTCAAGTATGTCTCAACACTAGCATGATATAAAAAGGGACACTGCAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR-3UTR GCA 90 bp | TTCATGGCTAAAAAGCTCTGCATCAAACTCAATTCAGGAGGCCTTCCCTCCCCAACTTTTACATGGTGGTaGCTACTGCCGTTAATGTTT | + |
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Preference number: 2 (lower is better) Translates to: FMAKKLCIKLNSGGLPSPTFTWW*LLPLMF Trigger: AAACATTAACGGCAGTAGGCACCACCATGTAAAAGT...TGGGGAGGGAAGGCCTCCTGAATTGAGTTTGATGCAGAGCTTTTTAGCCATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR-3UTR CCA 90 bp | TTCATGGCTAAAAAGCTCTGCATCAAACTCAATTCAGGAGGCCTTCCCTCCCCAATTACTTGTCTGTTGTaGGTAAAGCAACAGGAATCC | + |
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Preference number: 2 (lower is better) Translates to: FMAKKLCIKLNSGGLPSPITCLL*VKQQES Trigger: GGATTCCTGTTGCTTTACCCACAACAGACAAGTAAT...TGGGGAGGGAAGGCCTCCTGAATTGAGTTTGATGCAGAGCTTTTTAGCCATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGGACGGTACAAATCCAATTAGGACTTTAACTTATGTACAAAGTGGATTTAAGAATGGAATAAGGTaGGGAGAAGAAGGGGACCAC | + |
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Preference number: 2 (lower is better) Translates to: WEDGTNPIRTLTYVQSGFKNGIR*GEEGDH Trigger: GTGGTCCCCTTCTTCTCCCCACCTTATTCCATTCTT...AAATCCACTTTGTACATAAGTTAAAGTCCTAATTGGATTTGTACCGTCCTCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR CAA 90 bp | CAGCTGCAGTGTCCCTTTTTATATCATGCTAGTGTTGAGACATACTaGACTAACTTGGGAACAGTTCGATATATTGACAACCGTCAACTT | + |
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Preference number: 2 (lower is better) Translates to: QLQCPFLYHASVETY*TNLGTVRYIDNRQL Trigger: AAGTTGACGGTTGTCAATATATCGAACTGTTCCCAAGTTAGTCAAGTATGTCTCAACACTAGCATGATATAAAAAGGGACACTGCAGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR-3UTR GCA 90 bp | TTTTTCATTCAGCTGCAGTGTCCCTTTTTATATCATGCTAGTGTTGAGACATACCCTAGTTTGGGATTCTaGAACTACAACTTTACGGGA | + |
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Preference number: 2 (lower is better) Translates to: FFIQLQCPFLYHASVETYPSLGF*NYNFTG Trigger: TCCCGTAAAGTTGTAGTTGCAGAATCCCAAACTAGG...GTATGTCTCAACACTAGCATGATATAAAAAGGGACACTGCAGCTGAATGAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR-3UTR CCA 90 bp | TGGGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTAAGCAACAGGAATCCTaGGAGATACAAGAAATCAGT | + |
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Preference number: 2 (lower is better) Translates to: WEQFDILTTVNLRKSTAFKQQES*EIQEIS Trigger: ACTGATTTCTTGTATCTCCCAGGATTCCTGTTGCTT...AAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGGACGGTACAAATCCAATTAGGACTTTAACTTATGTACAAAGTGGATTTCTGAAAGATTCTTCATaGCTAAAAAGCTCTGCATCA | + |
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Preference number: 2 (lower is better) Translates to: WEDGTNPIRTLTYVQSGFLKDSS*LKSSAS Trigger: TGATGCAGAGCTTTTTAGCCATGAAGAATCTTTCAG...AAATCCACTTTGTACATAAGTTAAAGTCCTAATTGGATTTGTACCGTCCTCCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR CAA 90 bp | TGTCCCTTTTTATATCATGCTAGTGTTGAGACATACTTGACTAACTaGGGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATC | + |
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Preference number: 2 (lower is better) Translates to: CPFLYHASVETYLTN*GTVRYIDNRQLKKI Trigger: GATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCCCAAGTTAGTCAAGTATGTCTCAACACTAGCATGATATAAAAAGGGACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR-3UTR GCA 90 bp | CTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAACAAGCCTTATACAGAAGCCAGAATaGAGAGTTAAGAATGGAATA | + |
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Preference number: 2 (lower is better) Translates to: LQLYGMPQIKTKRNLTSLIQKPE*RVKNGI Trigger: TATTCCATTCTTAACTCTGCATTCTGGCTTCTGTAT...AAGGCTTGTTAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR-3UTR GCA 90 bp | GGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGGGATTCAACCGCCATGTaGTTTTATAAAGGAAACATT | + |
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Preference number: 2 (lower is better) Translates to: GTVRYIDNRQLKKINSFWDSTAM*FYKGNI Trigger: AATGTTTCCTTTATAAAAGCACATGGCGGTTGAATC...CCAAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR-3UTR GCA 90 bp | TGGGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTTACAACTTTACGGGATaGCTCAAATCAAAACTAAGA | + |
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Preference number: 2 (lower is better) Translates to: WEQFDILTTVNLRKSTAFYNFTG*LKSKLR Trigger: TCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTA...AAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCCCA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR-3UTR CAA 90 bp | TTCATGGCTAAAAAGCTCTGCATCAAACTCAATTCAGGAGGCCTTCCCTCCCCACACTTAGACAATTACTaGTCTGTTGTGGGTAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: FMAKKLCIKLNSGGLPSPHLDNY*SVVGKA Trigger: TGCTTTACCCACAACAGACAAGTAATTGTCTAAGTG...TGGGGAGGGAAGGCCTCCTGAATTGAGTTTGATGCAGAGCTTTTTAGCCATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR GCA 72 bp | ACTATGACTGAAAGATTCTTCATGGCTAAAAAGCTCTaGATCAAACTCAATTCAGGAGGCCTTCCCTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: TMTERFFMAKKL*IKLNSGGLPSP Trigger: TGGGGAGGGAAGGCCTCCTGAATTGAGTTTGATGCAGAGCTTTTTAGCCATGAAGAATCTTTCAGTCATAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR TCA 72 bp | GTCCCTTTTTATATCATGCTAGTGTTGAGACATACTTaGCTAACTTGGGAACAGTTCGATATATTGACAACC | + |
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Preference number: 3 (lower is better) Translates to: VPFYIMLVLRHT*LTWEQFDILTT Trigger: GGTTGTCAATATATCGAACTGTTCCCAAGTTAGTCAAGTATGTCTCAACACTAGCATGATATAAAAAGGGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR-3UTR CAA 90 bp | ATTAGTACTATGACTGAAAGATTCTTCATGGCTAAAAAGCTCTGCATCAAACTCACAATTACTTGTCTGTaGTGGGTAAAGCAACAGGAA | + |
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Preference number: 3 (lower is better) Translates to: ISTMTERFFMAKKLCIKLTITCL*WVKQQE Trigger: TTCCTGTTGCTTTACCCACAACAGACAAGTAATTGT...GAGTTTGATGCAGAGCTTTTTAGCCATGAAGAATCTTTCAGTCATAGTACTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | TTCATGGCTAAAAAGCTCTGCATCAAACTCAATTCAGGAGGCCTTCCCTCCCCACACCGGAGGGGTCCATaGAGCCGCTACGGCCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: FMAKKLCIKLNSGGLPSPHRRGP*SRYGPK Trigger: CTTCGGGCCGTAGCGGCTCCATGGACCCCTCCGGTG...TGGGGAGGGAAGGCCTCCTGAATTGAGTTTGATGCAGAGCTTTTTAGCCATGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | TTCATGGCTAAAAAGCTCTGCATCAAACTCAATTCAGGAGGCCTTCCCTCCCCACGCTGTCCGTGCTCTTaGTGCTGGAGCACCCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: FMAKKLCIKLNSGGLPSPRCPCS*CWSTPH Trigger: GTGAGGGGTGCTCCAGCACCAAGAGCACGGACAGCG...TGGGGAGGGAAGGCCTCCTGAATTGAGTTTGATGCAGAGCTTTTTAGCCATGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | TTCATGGCTAAAAAGCTCTGCATCAAACTCAATTCAGGAGGCCTTCCCTCCCCACCTTCAGCGACGGCCTaGTCCCATTCCAGTCGTCCT | + |
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Preference number: 4 (lower is better) Translates to: FMAKKLCIKLNSGGLPSPPSATA*SHSSRP Trigger: AGGACGACTGGAATGGGACCAGGCCGTCGCTGAAGG...TGGGGAGGGAAGGCCTCCTGAATTGAGTTTGATGCAGAGCTTTTTAGCCATGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | TTCATGGCTAAAAAGCTCTGCATCAAACTCAATTCAGGAGGCCTTCCCTCCCCATGGGGTCTCCACCTTTaGGCAGCTCTTCCTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: FMAKKLCIKLNSGGLPSPWGLHL*AALPPW Trigger: CCAAGGAGGAAGAGCTGCGCAAAGGTGGAGACCCCA...TGGGGAGGGAAGGCCTCCTGAATTGAGTTTGATGCAGAGCTTTTTAGCCATGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | TTCATGGCTAAAAAGCTCTGCATCAAACTCAATTCAGGAGGCCTTCCCTCCCCAGTATGCTCCCTTCACTaGCCTAGCAGGAGGGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: FMAKKLCIKLNSGGLPSPVCSLH*PSRRGL Trigger: AAGGCCCCTCCTGCTAGGCCAGTGAAGGGAGCATAC...TGGGGAGGGAAGGCCTCCTGAATTGAGTTTGATGCAGAGCTTTTTAGCCATGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | CTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAACAAGCCTTGGCGGTTGGCGGGGGTaGCAGAGCGGGAGCGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LQLYGMPQIKTKRNLTSLGGWRG*QSGSGS Trigger: GCTACCGCTCCCGCTCTGCCACCCCCGCCAACCGCC...AAGGCTTGTTAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR TCA 90 bp | TGGGAGGACGGTACAAATCCAATTAGGACTTTAACTTATGTACAAAGTGGATTTTGCCGAGACGGCGTCTaGCGCACCGAGGGGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: WEDGTNPIRTLTYVQSGFCRDGV*RTEGWA Trigger: TGCCCACCCCTCGGTGCGTCAGACGCCGTCTCGGCA...AAATCCACTTTGTACATAAGTTAAAGTCCTAATTGGATTTGTACCGTCCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | ATTAGTACTATGACTGAAAGATTCTTCATGGCTAAAAAGCTCTGCATCAAACTCCCGAAGACCGGCTCATaGGCGCGGCGGGGTCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: ISTMTERFFMAKKLCIKLPKTGS*ARRGRP Trigger: GGGACGACCCCGCCGCGCGCATGAGCCGGTCTTCGG...GAGTTTGATGCAGAGCTTTTTAGCCATGAAGAATCTTTCAGTCATAGTACTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | TTTTTCATTCAGCTGCAGTGTCCCTTTTTATATCATGCTAGTGTTGAGACATACTCCCCGGCCTCTCACTaGCACCCCACGTCCACGAGA | + |
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Preference number: 4 (lower is better) Translates to: FFIQLQCPFLYHASVETYSPASH*HPTSTR Trigger: TCTCGTGGACGTGGGGTGCCAGTGAGAGGCCGGGGA...GTATGTCTCAACACTAGCATGATATAAAAAGGGACACTGCAGCTGAATGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | TGGGAGGACGGTACAAATCCAATTAGGACTTTAACTTATGTACAAAGTGGATTTCCTGGGAACAGGTGGTaGAGGAGGTGCAGCTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: WEDGTNPIRTLTYVQSGFPGNRW*RRCSSP Trigger: CGGGGAGCTGCACCTCCTCCACCACCTGTTCCCAGG...AAATCCACTTTGTACATAAGTTAAAGTCCTAATTGGATTTGTACCGTCCTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR TCA 90 bp | GGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGGGCTGCATGGCGTGAGTaGAGGACGGGTCGAGCGAGT | + |
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Preference number: 4 (lower is better) Translates to: GTVRYIDNRQLKKINSFWAAWRE*RTGRAS Trigger: ACTCGCTCGACCCGTCCTTCACTCACGCCATGCAGC...CCAAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR TCA 90 bp | CTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAACAAGCCTTAGCAGCTGCATGGCGTaGGTGAAGGACGGGTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: LQLYGMPQIKTKRNLTSLSSCMA*VKDGSS Trigger: GCTCGACCCGTCCTTCACTCACGCCATGCAGCTGCT...AAGGCTTGTTAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | TGGGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGGGTCGTCCCGGCGCTaGATCTGGGAGGATGTGCGA | + |
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Preference number: 4 (lower is better) Translates to: WEQFDILTTVNLRKSTAFGSSRR*IWEDVR Trigger: TCGCACATCCTCCCAGATGCAGCGCCGGGACGACCC...AAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | TTCATGGCTAAAAAGCTCTGCATCAAACTCAATTCAGGAGGCCTTCCCTCCCCAAATCTTCTCAATTTCTaGCGTCAGCAGCTGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: FMAKKLCIKLNSGGLPSPNLLNF*RQQLHG Trigger: GCCATGCAGCTGCTGACGGCAGAAATTGAGAAGATT...TGGGGAGGGAAGGCCTCCTGAATTGAGTTTGATGCAGAGCTTTTTAGCCATGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | TGGGAGGACGGTACAAATCCAATTAGGACTTTAACTTATGTACAAAGTGGATTTGATGCCCGCTGTCCGTaGTCTTGGTGCTGGAGCACC | + |
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Preference number: 4 (lower is better) Translates to: WEDGTNPIRTLTYVQSGFDARCP*SWCWST Trigger: GGTGCTCCAGCACCAAGAGCACGGACAGCGGGCATC...AAATCCACTTTGTACATAAGTTAAAGTCCTAATTGGATTTGTACCGTCCTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | ATTAGTACTATGACTGAAAGATTCTTCATGGCTAAAAAGCTCTGCATCAAACTCGCCCCTGGGAACAGGTaGTGGAGGAGGTGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ISTMTERFFMAKKLCIKLAPGNR*WRRCSS Trigger: GGAGCTGCACCTCCTCCACCACCTGTTCCCAGGGGC...GAGTTTGATGCAGAGCTTTTTAGCCATGAAGAATCTTTCAGTCATAGTACTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | CTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAACAAGCCTTCAACACCACGGCCCCTaGGAACAGGTGGTGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LQLYGMPQIKTKRNLTSLQHHGP*EQVVEE Trigger: CTCCTCCACCACCTGTTCCCAGGGGCCGTGGTGTTG...AAGGCTTGTTAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR TCA 90 bp | TGGGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTTCTCTGGCTCCATCTTaGCCGAGGCTGTGGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: WEQFDILTTVNLRKSTAFSLAPS*PRLWPR Trigger: CCTCGGCCACAGCCTCGGTCAAGATGGAGCCAGAGA...AAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | TTCATGGCTAAAAAGCTCTGCATCAAACTCAATTCAGGAGGCCTTCCCTCCCCAAGCATAAGCCTCACATaGGGGTCCAAAGACTTCAAT | + |
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Preference number: 4 (lower is better) Translates to: FMAKKLCIKLNSGGLPSPSISLT*GSKDFN Trigger: ATTGAAGTCTTTGGACCCCCATGTGAGGCTTATGCT...TGGGGAGGGAAGGCCTCCTGAATTGAGTTTGATGCAGAGCTTTTTAGCCATGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | CTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAACAAGCCTTCACAGTAGGTGGGGGTaGCACGCCTCGAGTCACAGT | + |
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Preference number: 4 (lower is better) Translates to: LQLYGMPQIKTKRNLTSLHSRWG*HASSHS Trigger: ACTGTGACTCGAGGCGTGCCACCCCCACCTACTGTG...AAGGCTTGTTAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | TGGGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTACCCCTCACAGTAGGTaGGGGTGGCACGCCTCGAGT | + |
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Preference number: 4 (lower is better) Translates to: WEQFDILTTVNLRKSTAFTPHSR*GWHASS Trigger: ACTCGAGGCGTGCCACCCCCACCTACTGTGAGGGGT...AAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | TGGGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTTCCCGGCGCTGCATCTaGGAGGATGTGCGATCCAAG | + |
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Preference number: 4 (lower is better) Translates to: WEQFDILTTVNLRKSTAFSRRCI*EDVRSK Trigger: CTTGGATCGCACATCCTCCCAGATGCAGCGCCGGGA...AAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | ATTAGTACTATGACTGAAAGATTCTTCATGGCTAAAAAGCTCTGCATCAAACTCTGTCCGTGCTCTTGGTaGTGGAGCACCCCTCACAGT | + |
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Preference number: 4 (lower is better) Translates to: ISTMTERFFMAKKLCIKLCPCSW*WSTPHS Trigger: ACTGTGAGGGGTGCTCCAGCACCAAGAGCACGGACA...GAGTTTGATGCAGAGCTTTTTAGCCATGAAGAATCTTTCAGTCATAGTACTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | CTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAACAAGCCTTAAGGTATCCTCTGGATaGCCGCTGTCCGTGCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LQLYGMPQIKTKRNLTSLKVSSG*PLSVLL Trigger: CAAGAGCACGGACAGCGGGCATCCAGAGGATACCTT...AAGGCTTGTTAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | CTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAACAAGCCTTTGGGTGCTCTCTGTATaGTCCCTTCACTGGCCTAGC | + |
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Preference number: 4 (lower is better) Translates to: LQLYGMPQIKTKRNLTSLWVLSV*SLHWPS Trigger: GCTAGGCCAGTGAAGGGAGCATACAGAGAGCACCCA...AAGGCTTGTTAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | ATTCTGCAACTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAGGCAAAGGTATCCTCTaGATGCCCGCTGTCCGTGCT | + |
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Preference number: 4 (lower is better) Translates to: ILQLQLYGMPQIKTKRNLGKGIL*MPAVRA Trigger: AGCACGGACAGCGGGCATCCAGAGGATACCTTTGCC...TAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAGTTGCAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR TCA 90 bp | ATTAGTACTATGACTGAAAGATTCTTCATGGCTAAAAAGCTCTGCATCAAACTCGCCCCAGCGTCCAAGTaGACTTTTCATGGAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: ISTMTERFFMAKKLCIKLAPASK*TFHGVQ Trigger: CTGCACTCCATGAAAAGTTCACTTGGACGCTGGGGC...GAGTTTGATGCAGAGCTTTTTAGCCATGAAGAATCTTTCAGTCATAGTACTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | TTCATGGCTAAAAAGCTCTGCATCAAACTCAATTCAGGAGGCCTTCCCTCCCCACCTTTTTCATTCAGCTaGAGTGTCCCTTTTTATATC | + |
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Preference number: 4 (lower is better) Translates to: FMAKKLCIKLNSGGLPSPPFSFS*SVPFYI Trigger: GATATAAAAAGGGACACTGCAGCTGAATGAAAAAGG...TGGGGAGGGAAGGCCTCCTGAATTGAGTTTGATGCAGAGCTTTTTAGCCATGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | GGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGGCAGGTACTTGTTCTCTaGCTCCATCTTGACCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: GTVRYIDNRQLKKINSFWQVLVL*LHLDRG Trigger: GCCTCGGTCAAGATGGAGCCAGAGAACAAGTACCTG...CCAAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | TGGGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGCATCTGGGAGGATGTaGGATCCAAGGAGCGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WEQFDILTTVNLRKSTAFASGRM*DPRSEK Trigger: TTTCTCGCTCCTTGGATCGCACATCCTCCCAGATGC...AAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | TGGGAGGACGGTACAAATCCAATTAGGACTTTAACTTATGTACAAAGTGGATTTGCAGCTCTTCCTCCTTaGCTTTGTCTCTCATTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WEDGTNPIRTLTYVQSGFAALPP*LCLSLS Trigger: GCTCAATGAGAGACAAAGCCAAGGAGGAAGAGCTGC...AAATCCACTTTGTACATAAGTTAAAGTCCTAATTGGATTTGTACCGTCCTCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | TGGGAGGACGGTACAAATCCAATTAGGACTTTAACTTATGTACAAAGTGGATTTTCAAGTGGGCATATTTaGGGTCTCCACCTTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: WEDGTNPIRTLTYVQSGFSSGHI*GLHLCA Trigger: TGCGCAAAGGTGGAGACCCCAAATATGCCCACTTGA...AAATCCACTTTGTACATAAGTTAAAGTCCTAATTGGATTTGTACCGTCCTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | ATTCTGCAACTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAGATGGCTCCCCTTACTaGTGTACCACGTACCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILQLQLYGMPQIKTKRNLDGSPY*CTTYQS Trigger: GCTTTGGTACGTGGTACACCAGTAAGGGGAGCCATC...TAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAGTTGCAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | TGGGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTTTCTGGTGCAGGAGGTaGAGGCAAAGGTATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WEQFDILTTVNLRKSTAFFWCRR*RQRYPL Trigger: CAGAGGATACCTTTGCCTCCACCTCCTGCACCAGAA...AAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCCCA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR TCA 90 bp | TTTTTCATTCAGCTGCAGTGTCCCTTTTTATATCATGCTAGTGTTGAGACATACGGCTTTGTCTCTCATTaGGCCCTTTCCCAATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FFIQLQCPFLYHASVETYGFVSH*ALSQYR Trigger: TCTGTATTGGGAAAGGGCTCAATGAGAGACAAAGCC...GTATGTCTCAACACTAGCATGATATAAAAAGGGACACTGCAGCTGAATGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | TTTTTCATTCAGCTGCAGTGTCCCTTTTTATATCATGCTAGTGTTGAGACATACAAGAATGGAATAAGGTaGGGAGAAGAAGGGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFIQLQCPFLYHASVETYKNGIR*GEEGDH Trigger: GTGGTCCCCTTCTTCTCCCCACCTTATTCCATTCTT...GTATGTCTCAACACTAGCATGATATAAAAAGGGACACTGCAGCTGAATGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | TGGGAGGACGGTACAAATCCAATTAGGACTTTAACTTATGTACAAAGTGGATTTCAATACAGAGATCTTTaGACCAGTCTCTTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WEDGTNPIRTLTYVQSGFQYRDL*TSLFLQ Trigger: CTGCAGGAAGAGACTGGTGCAAAGATCTCTGTATTG...AAATCCACTTTGTACATAAGTTAAAGTCCTAATTGGATTTGTACCGTCCTCCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | CTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAACAAGCCTTGATTGTATTCCCTTGTaGTCCAAGAATCTTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQLYGMPQIKTKRNLTSLDCIPL*SKNLPH Trigger: GTGGGGAAGATTCTTGGACCACAAGGGAATACAATC...AAGGCTTGTTAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | GGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGGTTCTTCATATGTTTCTaGTGCAGGAGGTGGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GTVRYIDNRQLKKINSFWFFICF*CRRWRQ Trigger: TTGCCTCCACCTCCTGCACCAGAAACATATGAAGAA...CCAAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | GGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGGCTCACTTTTACATGGTaGTGCCTACTGCCGTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: GTVRYIDNRQLKKINSFWLTFTW*CLLPLM Trigger: CATTAACGGCAGTAGGCACCACCATGTAAAAGTGAG...CCAAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | TGGGAGGACGGTACAAATCCAATTAGGACTTTAACTTATGTACAAAGTGGATTTCTTCCGAGAACAAAATaGGAGGACGGTACAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: WEDGTNPIRTLTYVQSGFLPRTK*EDGTNP Trigger: TGGATTTGTACCGTCCTCCCATTTTGTTCTCGGAAG...AAATCCACTTTGTACATAAGTTAAAGTCCTAATTGGATTTGTACCGTCCTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR TCA 90 bp | ATTCTGCAACTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAGTACTAGAAATTTCTTaGCTTCCTCCATGGCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILQLQLYGMPQIKTKRNLVLEIS*LPPWHG Trigger: CCCATGCCATGGAGGAAGTCAAGAAATTTCTAGTAC...TAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAGTTGCAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | GGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGGGCACCAGTCTCTTCCTaGAGTCTTTTGATTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: GTVRYIDNRQLKKINSFWAPVSS*SLLIVF Trigger: GAATACAATCAAAAGACTGCAGGAAGAGACTGGTGC...CCAAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | GGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGGTTAATAACGTCCATATaGGTGCTCTCTGTATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTVRYIDNRQLKKINSFWLITSI*VLSVCS Trigger: GGAGCATACAGAGAGCACCCATATGGACGTTATTAA...CCAAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR TCA 90 bp | GGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGGTTTGAGTCTCCTTTCTaGATCTTCTCAATTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTVRYIDNRQLKKINSFWFESPF*IFSISA Trigger: GGCAGAAATTGAGAAGATTCAGAAAGGAGACTCAAA...CCAAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR TCA 90 bp | CTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAACAAGCCTTGTCCAAAGACTTCAATaGAGACATGCAGATCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LQLYGMPQIKTKRNLTSLVQRLQ*RHADPY Trigger: ATATGGATCTGCATGTCTTCATTGAAGTCTTTGGAC...AAGGCTTGTTAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR TCA 90 bp | TGGGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGTGTTGAGACATACTTaGCTAACTTGGGAACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WEQFDILTTVNLRKSTAFVLRHT*LTWEQF Trigger: GAACTGTTCCCAAGTTAGTCAAGTATGTCTCAACAC...AAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | ATTCTGCAACTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTATTGAACTTGGGATACTaGTTGACAGGTATCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: ILQLQLYGMPQIKTKRNLLNLGY*LTGIST Trigger: AGTGCTGATACCTGTCAAGCAGTATCCCAAGTTCAA...TAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAGTTGCAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | TGGGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTCCTAGTTTGGGATTCTaGAACTACAACTTTACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WEQFDILTTVNLRKSTAFPSLGF*NYNFTG Trigger: TCCCGTAAAGTTGTAGTTGCAGAATCCCAAACTAGG...AAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | GGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGGAAGCAACAGGAATCCTaGGAGATACAAGAAATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTVRYIDNRQLKKINSFWKQQES*EIQEIS Trigger: ACTGATTTCTTGTATCTCCCAGGATTCCTGTTGCTT...CCAAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR TCA 90 bp | CTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAACAAGCCTTTCTAGAAATTGCTCCTaGCAGATATCATCCATCATA | + |
|
Preference number: 4 (lower is better) Translates to: LQLYGMPQIKTKRNLTSLSRNCS*QISSII Trigger: TATGATGGATGATATCTGTCAGGAGCAATTTCTAGA...AAGGCTTGTTAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR TCA 90 bp | ATTCTGCAACTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTACTGCTGCAGACATTTTaGCATAAGTTTAAGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: ILQLQLYGMPQIKTKRNLLLQTF*HKFKLP Trigger: AGGTAGCTTAAACTTATGTCAAAATGTCTGCAGCAG...TAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAGTTGCAGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR TCA 90 bp | TTTTTCATTCAGCTGCAGTGTCCCTTTTTATATCATGCTAGTGTTGAGACATACAGGACTAAACTTTATTaGCAAACTGCTGCAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: FFIQLQCPFLYHASVETYRTKLY*QTAADI Trigger: AATGTCTGCAGCAGTTTGTCAATAAAGTTTAGTCCT...GTATGTCTCAACACTAGCATGATATAAAAAGGGACACTGCAGCTGAATGAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | TGGGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTACTTTTACATGGTGGTaGCTACTGCCGTTAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WEQFDILTTVNLRKSTAFTFTWW*LLPLMF Trigger: AAACATTAACGGCAGTAGGCACCACCATGTAAAAGT...AAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | ATTCTGCAACTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAATTACTTGTCTGTTGTaGGTAAAGCAACAGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: ILQLQLYGMPQIKTKRNLITCLL*VKQQES Trigger: GGATTCCTGTTGCTTTACCCACAACAGACAAGTAAT...TAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAGTTGCAGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | CTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAACAAGCCTTAAATGTAGCCTAGTTTaGGATTCTGCAACTACAACT | + |
|
Preference number: 4 (lower is better) Translates to: LQLYGMPQIKTKRNLTSLKCSLV*DSATTT Trigger: AGTTGTAGTTGCAGAATCCCAAACTAGGCTACATTT...AAGGCTTGTTAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CCA 90 bp | CTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAACAAGCCTTCTGAAAGATTCTTCATaGCTAAAAAGCTCTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LQLYGMPQIKTKRNLTSLLKDSS*LKSSAS Trigger: TGATGCAGAGCTTTTTAGCCATGAAGAATCTTTCAG...AAGGCTTGTTAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | GGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGGTACAACTTTACGGGATaGCTCAAATCAAAACTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTVRYIDNRQLKKINSFWYNFTG*LKSKLR Trigger: TCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTA...CCAAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR CAA 72 bp | TTATATCATGCTAGTGTTGAGACATACTTGACTAACTaGGGAACAGTTCGATATATTGACAACCGTCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LYHASVETYLTN*GTVRYIDNRQL Trigger: AAGTTGACGGTTGTCAATATATCGAACTGTTCCCAAGTTAGTCAAGTATGTCTCAACACTAGCATGATATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| 3UTR CAA 72 bp | TGTCCCTTTTTATATCATGCTAGTGTTGAGACATACTaGACTAACTTGGGAACAGTTCGATATATTGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: CPFLYHASVETY*TNLGTVRYIDN Trigger: GTTGTCAATATATCGAACTGTTCCCAAGTTAGTCAAGTATGTCTCAACACTAGCATGATATAAAAAGGGACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | ATTAGTACTATGACTGAAAGATTCTTCATGGCTAAAAAGCTCTGCATCAAACTCATACAGAAGCCAGAATaGAGAGTTAAGAATGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: ISTMTERFFMAKKLCIKLIQKPE*RVKNGI Trigger: TATTCCATTCTTAACTCTGCATTCTGGCTTCTGTAT...GAGTTTGATGCAGAGCTTTTTAGCCATGAAGAATCTTTCAGTCATAGTACTAAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR GCA 90 bp | TGGGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGATTCAACCGCCATGTaGTTTTATAAAGGAAACATT | + |
|
Preference number: 4 (lower is better) Translates to: WEQFDILTTVNLRKSTAFDSTAM*FYKGNI Trigger: AATGTTTCCTTTATAAAAGCACATGGCGGTTGAATC...AAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCCCA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS CCA 90 bp | GGAGCGAGAAAGCGACGCGGCAGCGACGGAGGCCCGAGCGGCGGTTaGCGGGGGTGGCAGAGCGGGAGCGGTAGCGACCGAAGCCGACCC | + |
|
Preference number: 5 (lower is better) Translates to: GARKRRGSDGGPSGG*RGWQSGSGSDRSRP Trigger: GGGTCGGCTTCGGTCGCTACCGCTCCCGCTCTGCCACCCCCGCCAACCGCCGCTCGGGCCTCCGTCGCTGCCGCGTCGCTTTCTCGCTCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS GCA 90 bp | CGGCCCGAAGACCGGCTCATGCGCGCGGCGGGGTCGTCCCGGCGCTaGATCTGGGAGGATGTGCGATCCAAGGAGCGAGAAAGCGACGCG | + |
|
Preference number: 5 (lower is better) Translates to: RPEDRLMRAAGSSRR*IWEDVRSKERESDA Trigger: CGCGTCGCTTTCTCGCTCCTTGGATCGCACATCCTCCCAGATGCAGCGCCGGGACGACCCCGCCGCGCGCATGAGCCGGTCTTCGGGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000307714.12 ENST00000327300.12 |
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| CDS CCA 90 bp | GAAGACCGGCTCATGCGCGCGGCGGGGTCGTCCCGGCGCTGCATCTaGGAGGATGTGCGATCCAAGGAGCGAGAAAGCGACGCGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: EDRLMRAAGSSRRCI*EDVRSKERESDAAA Trigger: CGCTGCCGCGTCGCTTTCTCGCTCCTTGGATCGCACATCCTCCCAGATGCAGCGCCGGGACGACCCCGCCGCGCGCATGAGCCGGTCTTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000307714.12 ENST00000327300.12 |
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| CDS CCA 90 bp | AGGTGGAGGCAAAGGTATCCTCTGGATGCCCGCTGTCCGTGCTCTTaGTGCTGGAGCACCCCTCACAGTAGGTGGGGGTGGCACGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RWRQRYPLDARCPCS*CWSTPHSRWGWHAS Trigger: CGAGGCGTGCCACCCCCACCTACTGTGAGGGGTGCTCCAGCACCAAGAGCACGGACAGCGGGCATCCAGAGGATACCTTTGCCTCCACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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| CDS GCA 90 bp | TGGAGGCAAAGGTATCCTCTGGATGCCCGCTGTCCGTGCTCTTGGTaGTGGAGCACCCCTCACAGTAGGTGGGGGTGGCACGCCTCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: WRQRYPLDARCPCSW*WSTPHSRWGWHASS Trigger: ACTCGAGGCGTGCCACCCCCACCTACTGTGAGGGGTGCTCCAGCACCAAGAGCACGGACAGCGGGCATCCAGAGGATACCTTTGCCTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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| CDS CCA 90 bp | AGGCAAAGGTATCCTCTGGATGCCCGCTGTCCGTGCTCTTGGTGCTaGAGCACCCCTCACAGTAGGTGGGGGTGGCACGCCTCGAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RQRYPLDARCPCSWC*STPHSRWGWHASSH Trigger: GTGACTCGAGGCGTGCCACCCCCACCTACTGTGAGGGGTGCTCCAGCACCAAGAGCACGGACAGCGGGCATCCAGAGGATACCTTTGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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| CDS CCA 90 bp | CCTGGGAACAGGTGGTGGAGGAGGTGCAGCTCCCCGGCCTCTCACTaGCACCCCACGTCCACGAGAGGGTTCAGGTACTCCATTCAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PGNRWWRRCSSPASH*HPTSTRGFRYSIQV Trigger: TACTTGAATGGAGTACCTGAACCCTCTCGTGGACGTGGGGTGCCAGTGAGAGGCCGGGGAGCTGCACCTCCTCCACCACCTGTTCCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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| CDS CCA 90 bp | TCTTCATATGTTTCTGGTGCAGGAGGTGGAGGCAAAGGTATCCTCTaGATGCCCGCTGTCCGTGCTCTTGGTGCTGGAGCACCCCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SSYVSGAGGGGKGIL*MPAVRALGAGAPLT Trigger: TGTGAGGGGTGCTCCAGCACCAAGAGCACGGACAGCGGGCATCCAGAGGATACCTTTGCCTCCACCTCCTGCACCAGAAACATATGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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| CDS CCA 90 bp | AGCCTTTTATGGAAGGGCAGTGATCACCCTCCCTTGGGAGCCCTCTaGAAGGGTTCAAGGACTCACAGGCTGACACCCATAACACAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLWKGSDHPPLGAL*KGSRTHRLTPITQV Trigger: CACCTGTGTTATGGGTGTCAGCCTGTGAGTCCTTGAACCCTTCCAGAGGGCTCCCAAGGGAGGGTGATCACTGCCCTTCCATAAAAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484270.2 |
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| CDS CCA 90 bp | TTTTTAATAACGTCCATATGGGTGCTCTCTGTATGCTCCCTTCACTaGCCTAGCAGGAGGGGCCTTCAGCGACGGCCTGGTCCCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLITSIWVLSVCSLH*PSRRGLQRRPGPIP Trigger: TGGAATGGGACCAGGCCGTCGCTGAAGGCCCCTCCTGCTAGGCCAGTGAAGGGAGCATACAGAGAGCACCCATATGGACGTTATTAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 |
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| CDS GCA 90 bp | CCCTCATGTTTGTTTTTAATAACGTCCATATGGGTGCTCTCTGTATaGTCCCTTCACTGGCCTAGCAGGAGGGGCCTTCAGCGACGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSCLFLITSIWVLSV*SLHWPSRRGLQRRP Trigger: AGGCCGTCGCTGAAGGCCCCTCCTGCTAGGCCAGTGAAGGGAGCATACAGAGAGCACCCATATGGACGTTATTAAAAACAAACATGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 |
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| CDS CCA 90 bp | AGTGGGGAAACAGAAAACGGTGGTAGGGTGTTTCAGCCAATTCTATaGGAGGCTAAAGGGAAGCACACATACTGGGAATGGCACAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGETENGGRVFQPIL*EAKGKHTYWEWHSR Trigger: CCTACTGTGCCATTCCCAGTATGTGTGCTTCCCTTTAGCCTCCCATAGAATTGGCTGAAACACCCTACCACCGTTTTCTGTTTCCCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484270.2 |
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| CDS CCA 90 bp | CCCAAATTAATTGAATCTTCTCACTTGGCTTTCCTCAGCCTTTTATaGAAGGGCAGTGATCACCCTCCCTTGGGAGCCCTCTGGAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PKLIESSHLAFLSLL*KGSDHPPLGALWKG Trigger: ACCCTTCCAGAGGGCTCCCAAGGGAGGGTGATCACTGCCCTTCCATAAAAGGCTGAGGAAAGCCAAGTGAGAAGATTCAATTAATTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484270.2 |
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| CDS CCA 90 bp | TGTATCATCATATCCATATTCTTCATATGTTTCTGGTGCAGGAGGTaGAGGCAAAGGTATCCTCTGGATGCCCGCTGTCCGTGCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CIIISIFFICFWCRR*RQRYPLDARCPCSW Trigger: CCAAGAGCACGGACAGCGGGCATCCAGAGGATACCTTTGCCTCCACCTCCTGCACCAGAAACATATGAAGAATATGGATATGATGATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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| CDS-3UTR CAA 90 bp | TGGGAGGACGGTACAAATCCAATTAGGACTTTAACTTATGTACAAAGTGGATTTCCGCTGTCCGTGCTCTaGGTGCTGGAGCACCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WEDGTNPIRTLTYVQSGFPLSVL*VLEHPS Trigger: TGAGGGGTGCTCCAGCACCAAGAGCACGGACAGCGG...AAATCCACTTTGTACATAAGTTAAAGTCCTAATTGGATTTGTACCGTCCTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS GCA 90 bp | TGGCACATTGTTCAAATTTCTTACATATTCTTCATATGTTTCTGGTaGAGGAGGTGGAGGCAAAGGTATCCTCTGGATGCCCGCTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: WHIVQISYIFFICFW*RRWRQRYPLDARCP Trigger: CGGACAGCGGGCATCCAGAGGATACCTTTGCCTCCACCTCCTGCACCAGAAACATATGAAGAATATGTAAGAAATTTGAACAATGTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307714.12 |
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| CDS GCA 90 bp | CTCTTTAAAGTCTTGAACAGTTTAATTGTTAGCACCACAGTCCCCTaGAGCCCTGAGGACTCCATTCTGGGCCTAAAGACTCTTAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LFKVLNSLIVSTTVP*SPEDSILGLKTLKG Trigger: TCCCTTAAGAGTCTTTAGGCCCAGAATGGAGTCCTCAGGGCTGCAGGGGACTGTGGTGCTAACAATTAAACTGTTCAAGACTTTAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484270.2 |
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| CDS CCA 90 bp | CTTGACTTCCTCCATGGCATGGGCCATAAGAGCATAAGCCTCACATaGGGGTCCAAAGACTTCAATGAAGACATGCAGATCCATATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LDFLHGMGHKSISLT*GSKDFNEDMQIHIQ Trigger: TTGAATATGGATCTGCATGTCTTCATTGAAGTCTTTGGACCCCCATGTGAGGCTTATGCTCTTATGGCCCATGCCATGGAGGAAGTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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| CDS-3UTR CAA 90 bp | TTTTTCATTCAGCTGCAGTGTCCCTTTTTATATCATGCTAGTGTTGAGACATACTTCTCTGGCTCCATCTaGACCGAGGCTGTGGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: FFIQLQCPFLYHASVETYFSGSI*TEAVAE Trigger: CTCGGCCACAGCCTCGGTCAAGATGGAGCCAGAGAA...GTATGTCTCAACACTAGCATGATATAAAAAGGGACACTGCAGCTGAATGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS GCA 90 bp | ATTGAGCCCTTTCCCAATACAGAGATCTTTGCACCAGTCTCTTCCTaGAGTCTTTTGATTGTATTCCCTTGTGGTCCAAGAATCTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: IEPFPNTEIFAPVSS*SLLIVFPCGPRIFP Trigger: GGGGAAGATTCTTGGACCACAAGGGAATACAATCAAAAGACTGCAGGAAGAGACTGGTGCAAAGATCTCTGTATTGGGAAAGGGCTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 |
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| CDS-3UTR CAA 90 bp | TTCATGGCTAAAAAGCTCTGCATCAAACTCAATTCAGGAGGCCTTCCCTCCCCATCTTCCTGCAGTCTTTaGATTGTATTCCCTTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FMAKKLCIKLNSGGLPSPSSCSL*IVFPCG Trigger: ACCACAAGGGAATACAATCAAAAGACTGCAGGAAGA...TGGGGAGGGAAGGCCTCCTGAATTGAGTTTGATGCAGAGCTTTTTAGCCATGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CAA 90 bp | TTTTTCATTCAGCTGCAGTGTCCCTTTTTATATCATGCTAGTGTTGAGACATACAGTTCGGGCAGGTACTaGTTCTCTGGCTCCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FFIQLQCPFLYHASVETYSSGRY*FSGSIL Trigger: CAAGATGGAGCCAGAGAACAAGTACCTGCCCGAACT...GTATGTCTCAACACTAGCATGATATAAAAAGGGACACTGCAGCTGAATGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CAA 90 bp | GGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGGCGCAGCTCTTCCTCCTaGGCTTTGTCTCTCATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GTVRYIDNRQLKKINSFWRSSSS*ALSLIE Trigger: CTCAATGAGAGACAAAGCCAAGGAGGAAGAGCTGCG...CCAAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CAA 90 bp | CTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAACAAGCCTTTTCAAGTGGGCATATTaGGGGTCTCCACCTTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LQLYGMPQIKTKRNLTSLFKWAY*GSPPLR Trigger: GCGCAAAGGTGGAGACCCCAAATATGCCCACTTGAA...AAGGCTTGTTAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CAA 90 bp | ATTCTGCAACTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAAACTTGGGATACTGCTaGACAGGTATCAGCACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: ILQLQLYGMPQIKTKRNLNLGYC*TGISTR Trigger: GCGAGTGCTGATACCTGTCAAGCAGTATCCCAAGTT...TAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAGTTGCAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CAA 90 bp | TTTTTCATTCAGCTGCAGTGTCCCTTTTTATATCATGCTAGTGTTGAGACATACTCTTCCTCCTTGGCTTaGTCTCTCATTGAGCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FFIQLQCPFLYHASVETYSSSLA*SLIEPF Trigger: AAAGGGCTCAATGAGAGACAAAGCCAAGGAGGAAGA...GTATGTCTCAACACTAGCATGATATAAAAAGGGACACTGCAGCTGAATGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CAA 90 bp | GGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGGCCCACAAAATTGAACTaGGGATACTGCTTGACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTVRYIDNRQLKKINSFWPTKLN*GYCLTG Trigger: ACCTGTCAAGCAGTATCCCAAGTTCAATTTTGTGGG...CCAAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CAA 90 bp | TGGGAGGACGGTACAAATCCAATTAGGACTTTAACTTATGTACAAAGTGGATTTGGTACTAGAAATTTCTaGACTTCCTCCATGGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: WEDGTNPIRTLTYVQSGFGTRNF*TSSMAW Trigger: CCATGCCATGGAGGAAGTCAAGAAATTTCTAGTACC...AAATCCACTTTGTACATAAGTTAAAGTCCTAATTGGATTTGTACCGTCCTCCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CAA 90 bp | GGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGGTTTGATTGTATTCCCTaGTGGTCCAAGAATCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GTVRYIDNRQLKKINSFWFDCIP*WSKNLP Trigger: GGGAAGATTCTTGGACCACAAGGGAATACAATCAAA...CCAAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CAA 90 bp | GGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGGGTAGCCTTCGTAACTTaGTTCTGCGTATGTATCATC | + |
|
Preference number: 5 (lower is better) Translates to: GTVRYIDNRQLKKINSFWVAFVT*FCVCII Trigger: GATGATACATACGCAGAACAAAGTTACGAAGGCTAC...CCAAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CAA 90 bp | GGAACAGTTCGATATATTGACAACCGTCAACTTAAGAAAATCAACAGCTTTTGGCCTCATCATCCTTTTTaGAGTCTCCTTTCTGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: GTVRYIDNRQLKKINSFWPHHPF*SLLSES Trigger: AGATTCAGAAAGGAGACTCAAAAAAGGATGATGAGG...CCAAAAGCTGTTGATTTTCTTAAGTTGACGGTTGTCAATATATCGAACTGTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CAA 90 bp | CTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAACAAGCCTTACAATTACTTGTCTGTaGTGGGTAAAGCAACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQLYGMPQIKTKRNLTSLTITCL*WVKQQE Trigger: TTCCTGTTGCTTTACCCACAACAGACAAGTAATTGT...AAGGCTTGTTAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CAA 90 bp | ATTCTGCAACTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTACACTTAGACAATTACTaGTCTGTTGTGGGTAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ILQLQLYGMPQIKTKRNLHLDNY*SVVGKA Trigger: TGCTTTACCCACAACAGACAAGTAATTGTCTAAGTG...TAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAGTTGCAGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CAA 90 bp | ATTAGTACTATGACTGAAAGATTCTTCATGGCTAAAAAGCTCTGCATCAAACTCAGTGTTGAGACATACTaGACTAACTTGGGAACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ISTMTERFFMAKKLCIKLSVETY*TNLGTV Trigger: AACTGTTCCCAAGTTAGTCAAGTATGTCTCAACACT...GAGTTTGATGCAGAGCTTTTTAGCCATGAAGAATCTTTCAGTCATAGTACTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS-3UTR CAA 90 bp | ATTCTGCAACTACAACTTTACGGGATGCCTCAAATCAAAACTAAGAGAAACTTAGAACAGTTCGATATATaGACAACCGTCAACTTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ILQLQLYGMPQIKTKRNLEQFDI*TTVNLR Trigger: TCTTAAGTTGACGGTTGTCAATATATCGAACTGTTC...TAAGTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAGTTGCAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327300.12 |
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| CDS GCA 72 bp | GGTCCATGGAGCCGCTACGGCCCGAAGACCGGCTCATaGGCGCGGCGGGGTCGTCCCGGCGCTGCATCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GPWSRYGPKTGS*ARRGRPGAASG Trigger: CCCAGATGCAGCGCCGGGACGACCCCGCCGCGCGCATGAGCCGGTCTTCGGGCCGTAGCGGCTCCATGGACC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000307714.12 ENST00000327300.12 |
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| CDS CCA 72 bp | TCTGACGCACCGAGGGGTGGGCACCGGAGGGGTCCATaGAGCCGCTACGGCCCGAAGACCGGCTCATGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: SDAPRGGHRRGP*SRYGPKTGSCA Trigger: CGCGCATGAGCCGGTCTTCGGGCCGTAGCGGCTCCATGGACCCCTCCGGTGCCCACCCCTCGGTGCGTCAGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000492989.1 |
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| CDS GCA 72 bp | GACCGGCTCATGCGCGCGGCGGGGTCGTCCCGGCGCTaGATCTGGGAGGATGTGCGATCCAAGGAGCGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: DRLMRAAGSSRR*IWEDVRSKERE Trigger: TTCTCGCTCCTTGGATCGCACATCCTCCCAGATGCAGCGCCGGGACGACCCCGCCGCGCGCATGAGCCGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000307714.12 ENST00000327300.12 |
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| CDS CCA 72 bp | CTCATGCGCGCGGCGGGGTCGTCCCGGCGCTGCATCTaGGAGGATGTGCGATCCAAGGAGCGAGAAAGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: LMRAAGSSRRCI*EDVRSKERESD Trigger: GTCGCTTTCTCGCTCCTTGGATCGCACATCCTCCCAGATGCAGCGCCGGGACGACCCCGCCGCGCGCATGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000307714.12 ENST00000327300.12 |
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| CDS CCA 72 bp | AGGTGGTGGAGGAGGTGCAGCTCCCCGGCCTCTCACTaGCACCCCACGTCCACGAGAGGGTTCAGGTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: RWWRRCSSPASH*HPTSTRGFRYS Trigger: GGAGTACCTGAACCCTCTCGTGGACGTGGGGTGCCAGTGAGAGGCCGGGGAGCTGCACCTCCTCCACCACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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| CDS GCA 72 bp | AGGTATCCTCTGGATGCCCGCTGTCCGTGCTCTTGGTaGTGGAGCACCCCTCACAGTAGGTGGGGGTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RYPLDARCPCSW*WSTPHSRWGWH Trigger: GTGCCACCCCCACCTACTGTGAGGGGTGCTCCAGCACCAAGAGCACGGACAGCGGGCATCCAGAGGATACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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| CDS GCA 72 bp | CTGGTGCAGGAGGTGGAGGCAAAGGTATCCTCTGGATaGCCGCTGTCCGTGCTCTTGGTGCTGGAGCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: LVQEVEAKVSSG*PLSVLLVLEHP Trigger: GGGGTGCTCCAGCACCAAGAGCACGGACAGCGGGCATCCAGAGGATACCTTTGCCTCCACCTCCTGCACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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| CDS TCA 72 bp | GGGGTGGCACGCCTCGAGTCACAGTGGCACCTCTGGTaGTGGCTCCCCTTACTGGTGTACCACGTACCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GVARLESQWHLW*WLPLLVYHVPK Trigger: CTTTGGTACGTGGTACACCAGTAAGGGGAGCCATCACCAGAGGTGCCACTGTGACTCGAGGCGTGCCACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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| CDS CCA 72 bp | ACGTCCATATGGGTGCTCTCTGTATGCTCCCTTCACTaGCCTAGCAGGAGGGGCCTTCAGCGACGGCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TSIWVLSVCSLH*PSRRGLQRRPG Trigger: ACCAGGCCGTCGCTGAAGGCCCCTCCTGCTAGGCCAGTGAAGGGAGCATACAGAGAGCACCCATATGGACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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| CDS CCA 72 bp | GTTTCTGGTGCAGGAGGTGGAGGCAAAGGTATCCTCTaGATGCCCGCTGTCCGTGCTCTTGGTGCTGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VSGAGGGGKGIL*MPAVRALGAGA Trigger: TGCTCCAGCACCAAGAGCACGGACAGCGGGCATCCAGAGGATACCTTTGCCTCCACCTCCTGCACCAGAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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| CDS CCA 72 bp | TGGAAGGGCAGTGATCACCCTCCCTTGGGAGCCCTCTaGAAGGGTTCAAGGACTCACAGGCTGACACCCATA | + |
|
Preference number: 6 (lower is better) Translates to: WKGSDHPPLGAL*KGSRTHRLTPI Trigger: TATGGGTGTCAGCCTGTGAGTCCTTGAACCCTTCCAGAGGGCTCCCAAGGGAGGGTGATCACTGCCCTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484270.2 |
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| CDS CAA 90 bp | TTGGCTTTCCTCAGCCTTTTATGGAAGGGCAGTGATCACCCTCCCTaGGGAGCCCTCTGGAAGGGTTCAAGGACTCACAGGCTGACACCC | + |
|
Preference number: 6 (lower is better) Translates to: LAFLSLLWKGSDHPP*GALWKGSRTHRLTP Trigger: GGGTGTCAGCCTGTGAGTCCTTGAACCCTTCCAGAGGGCTCCCAAGGGAGGGTGATCACTGCCCTTCCATAAAAGGCTGAGGAAAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484270.2 |
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| CDS CCA 72 bp | TCAGCCTTTTATGGAAGGGCAGTGATCACCCTCCCTTaGGAGCCCTCTGGAAGGGTTCAAGGACTCACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SAFYGRAVITLP*EPSGRVQGLTG Trigger: GCCTGTGAGTCCTTGAACCCTTCCAGAGGGCTCCCAAGGGAGGGTGATCACTGCCCTTCCATAAAAGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484270.2 |
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| CDS CAA 72 bp | CTCAGCCTTTTATGGAAGGGCAGTGATCACCCTCCCTaGGGAGCCCTCTGGAAGGGTTCAAGGACTCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSLLWKGSDHPP*GALWKGSRTHR Trigger: CCTGTGAGTCCTTGAACCCTTCCAGAGGGCTCCCAAGGGAGGGTGATCACTGCCCTTCCATAAAAGGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484270.2 |
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| CDS TCA 72 bp | TCACTTGGCTTTCCTCAGCCTTTTATGGAAGGGCAGTaGTCACCCTCCCTTGGGAGCCCTCTGGAAGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLGFPQPFMEGQ*SPSLGSPLEGF Trigger: GAACCCTTCCAGAGGGCTCCCAAGGGAGGGTGATCACTGCCCTTCCATAAAAGGCTGAGGAAAGCCAAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484270.2 |
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| CDS GCA 72 bp | TTGTTTTTAATAACGTCCATATGGGTGCTCTCTGTATaGTCCCTTCACTGGCCTAGCAGGAGGGGCCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LFLITSIWVLSV*SLHWPSRRGLQ Trigger: CTGAAGGCCCCTCCTGCTAGGCCAGTGAAGGGAGCATACAGAGAGCACCCATATGGACGTTATTAAAAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 |
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| CDS GCA 72 bp | GTCTTGAACAGTTTAATTGTTAGCACCACAGTCCCCTaGAGCCCTGAGGACTCCATTCTGGGCCTAAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: VLNSLIVSTTVP*SPEDSILGLKT Trigger: AGTCTTTAGGCCCAGAATGGAGTCCTCAGGGCTGCAGGGGACTGTGGTGCTAACAATTAAACTGTTCAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484270.2 |
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| CDS CCA 72 bp | CTCCATGGCATGGGCCATAAGAGCATAAGCCTCACATaGGGGTCCAAAGACTTCAATGAAGACATGCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: LHGMGHKSISLT*GSKDFNEDMQI Trigger: GATCTGCATGTCTTCATTGAAGTCTTTGGACCCCCATGTGAGGCTTATGCTCTTATGGCCCATGCCATGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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| CDS CCA 72 bp | CCAATTCTATGGGAGGCTAAAGGGAAGCACACATACTaGGAATGGCACAGTAGGAGTTGCCAGTTAATTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PILWEAKGKHTY*EWHSRSCQLIP Trigger: GGGAATTAACTGGCAACTCCTACTGTGCCATTCCCAGTATGTGTGCTTCCCTTTAGCCTCCCATAGAATTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484270.2 |
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| CDS CCA 72 bp | ACAGAAAACGGTGGTAGGGTGTTTCAGCCAATTCTATaGGAGGCTAAAGGGAAGCACACATACTGGGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: TENGGRVFQPIL*EAKGKHTYWEW Trigger: CCATTCCCAGTATGTGTGCTTCCCTTTAGCCTCCCATAGAATTGGCTGAAACACCCTACCACCGTTTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484270.2 |
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| CDS CAA 90 bp | GTCCCCTTGACTCTGGCTGTAATAGCCTTCGTAGCCTTCGTAACTTaGTTCTGCGTATGTATCATCATATCCATAAAGGACCGAGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: VPLTLAVIAFVAFVT*FCVCIIISIKDRGP Trigger: AGGGCCTCGGTCCTTTATGGATATGATGATACATACGCAGAACAAAGTTACGAAGGCTACGAAGGCTATTACAGCCAGAGTCAAGGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307714.12 |
||
| CDS CAA 90 bp | GCCATGCTAGGGATACCCATTAGTCCCCTTCAACTCTTTAAAGTCTaGAACAGTTTAATTGTTAGCACCACAGTCCCCTGCAGCCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: AMLGIPISPLQLFKV*NSLIVSTTVPCSPE Trigger: CTCAGGGCTGCAGGGGACTGTGGTGCTAACAATTAAACTGTTCAAGACTTTAAAGAGTTGAAGGGGACTAATGGGTATCCCTAGCATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484270.2 |
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| CDS CAA 72 bp | ACAGAGATCTTTGCACCAGTCTCTTCCTGCAGTCTTTaGATTGTATTCCCTTGTGGTCCAAGAATCTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TEIFAPVSSCSL*IVFPCGPRIFP Trigger: GGGGAAGATTCTTGGACCACAAGGGAATACAATCAAAAGACTGCAGGAAGAGACTGGTGCAAAGATCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 |
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| CDS GCA 72 bp | TTTCCCAATACAGAGATCTTTGCACCAGTCTCTTCCTaGAGTCTTTTGATTGTATTCCCTTGTGGTCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: FPNTEIFAPVSS*SLLIVFPCGPR Trigger: TCTTGGACCACAAGGGAATACAATCAAAAGACTGCAGGAAGAGACTGGTGCAAAGATCTCTGTATTGGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 |
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| CDS CAA 90 bp | GTTCAGATGTTAAATAACTTGCCCAAATTAATTGAATCTTCTCACTaGGCTTTCCTCAGCCTTTTATGGAAGGGCAGTGATCACCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: VQMLNNLPKLIESSH*AFLSLLWKGSDHPP Trigger: GGGAGGGTGATCACTGCCCTTCCATAAAAGGCTGAGGAAAGCCAAGTGAGAAGATTCAATTAATTTGGGCAAGTTATTTAACATCTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484270.2 |
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| CDS CAA 72 bp | ACTCTGGCTGTAATAGCCTTCGTAGCCTTCGTAACTTaGTTCTGCGTATGTATCATCATATCCATAAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: TLAVIAFVAFVT*FCVCIIISIKD Trigger: GTCCTTTATGGATATGATGATACATACGCAGAACAAAGTTACGAAGGCTACGAAGGCTATTACAGCCAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307714.12 |
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| CDS CAA 90 bp | GTCCCCTTGACTCTGGCTGTAATAGCCTTCGTAGCCTTCGTAACTTaGTTCTGCGTATGTATCATCATATCCATATTCTTCATATGTTTC | + |
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Preference number: 6 (lower is better) Translates to: VPLTLAVIAFVAFVT*FCVCIIISIFFICF Trigger: GAAACATATGAAGAATATGGATATGATGATACATACGCAGAACAAAGTTACGAAGGCTACGAAGGCTATTACAGCCAGAGTCAAGGGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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| CDS CAA 72 bp | ACTCTGGCTGTAATAGCCTTCGTAGCCTTCGTAACTTaGTTCTGCGTATGTATCATCATATCCATATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TLAVIAFVAFVT*FCVCIIISIFF Trigger: GAAGAATATGGATATGATGATACATACGCAGAACAAAGTTACGAAGGCTACGAAGGCTATTACAGCCAGAGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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| CDS CAA 72 bp | TTAAATAACTTGCCCAAATTAATTGAATCTTCTCACTaGGCTTTCCTCAGCCTTTTATGGAAGGGCAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: LNNLPKLIESSH*AFLSLLWKGSD Trigger: ATCACTGCCCTTCCATAAAAGGCTGAGGAAAGCCAAGTGAGAAGATTCAATTAATTTGGGCAAGTTATTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484270.2 |
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| CDS CAA 90 bp | TCTTATGAGAAAATAAATCCAAGTAATTCTCCTCATCATCCTTTTTaGAGTCTCCTTTCTGAATCTTCTCAATTTCTGCCGTCAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SYEKINPSNSPHHPF*SLLSESSQFLPSAA Trigger: AGCTGCTGACGGCAGAAATTGAGAAGATTCAGAAAGGAGACTCAAAAAAGGATGATGAGGAGAATTACTTGGATTTATTTTCTCATAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307714.12 ENST00000327300.12 ENST00000484270.2 ENST00000492989.1 |
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