RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KHDC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000132680

Ensembl transcript IDs: ENST00000368319.3, ENST00000368320.7, ENST00000368321.8, ENST00000465953.1, ENST00000466520.1, ENST00000466713.1, ENST00000478002.5, ENST00000482337.5, ENST00000483237.1, ENST00000491599.1

Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAACTTTCTTTATGTCAGAACTGGGGCTATTCACCTGGAAAAGGCTaGCCAGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTT +
Preference number: 1 (lower is better)
Translates to: KLSLCQNWGYSPGKG*PGQMCMGTTLLGCF
Trigger: AAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCTGGTCAGCCTTTTCCAGGTGAATAGCCCCAGTTCTGACATAAAGAAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR CCA 90 bp CTGGAATTACAGGCGCCCACCACCATGCCCGCTAGTTTTTGTATTTTTAGTAGACTGCAAAGGTCCAGATaGTTCCCAGCACAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: LELQAPTTMPASFCIFSRLQRSR*FPAQAP
Trigger: TGGGGCCTGTGCTGGGAACCATCTGGACCTTTGCAG...TCTACTAAAAATACAAAAACTAGCGGGCATGGTGGTGGGCGCCTGTAATTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368320.7
3UTR-3UTR CCA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGCTGCAAAGGTCCAGATaGTTCCCAGCACAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALLQRSR*FPAQAP
Trigger: TGGGGCCTGTGCTGGGAACCATCTGGACCTTTGCAG...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR CCA 90 bp TTTATGTCAGAACTGGGGCTATTCACCTGGAAAAGGCTGACCAGGTCAAATGTGAACCCCCTGAGTAGCTaGAATTACAGGCGCCCACCA +
Preference number: 2 (lower is better)
Translates to: FMSELGLFTWKRLTRSNVNPLSS*NYRRPP
Trigger: TGGTGGGCGCCTGTAATTCCAGCTACTCAGGGGGTT...CACATTTGACCTGGTCAGCCTTTTCCAGGTGAATAGCCCCAGTTCTGACATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368320.7
3UTR-3UTR CCA 90 bp AATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATTAAGCCTTCCAAGCCGCTaGAATTACAGGCATGCACCA +
Preference number: 2 (lower is better)
Translates to: NGYETNVPEGASFGSPQLSLPSR*NYRHAP
Trigger: TGGTGCATGCCTGTAATTCCAGCGGCTTGGAAGGCT...TAATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368320.7
3UTR-3UTR TCA 90 bp TGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTTGGAGGGCAGTGGTCTaGTCTTGGCTCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: CFSCNQFWERETTVFHFCWRAVV*SWLTAT
Trigger: GGTTGCAGTGAGCCAAGATCAGACCACTGCCCTCCA...ACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368320.7
3UTR-3UTR TCA 90 bp TTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTGATGTGGAATGCAGTGGTGTaGTCTTGGCTCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: LAATSSGRERPLYFISVMWNAVV*SWLTAT
Trigger: GGTTGCAGTGAGCCAAGATCACACCACTGCATTCCA...CATCACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368320.7
3UTR-3UTR TCA 90 bp AGAGTCACTGAGGGTCAAAACTCTGTTCCACTGTTTCCTAGGGAGCCATCCAGAGTCACCCAAAAACGTTaGAGATCACACGAAAAACAG +
Preference number: 2 (lower is better)
Translates to: RVTEGQNSVPLFPREPSRVTQKR*RSHEKQ
Trigger: CTGTTTTTCGTGTGATCTTCAACGTTTTTGGGTGAC...TCTGGATGGCTCCCTAGGAAACAGTGGAACAGAGTTTTGACCCTCAGTGACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368320.7
3UTR-3UTR GCA 90 bp AATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATTATCTCTCTGTTTTAGCTaGAACCAGTTCTGGGAGAGA +
Preference number: 2 (lower is better)
Translates to: NGYETNVPEGASFGSPQLSLCFS*NQFWER
Trigger: TCTCTCCCAGAACTGGTTGCAGCTAAAACAGAGAGA...TAATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR CCA 90 bp GTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATGTTAGGATGCTTTGTTaGACAAGCACATTTCACCAA +
Preference number: 2 (lower is better)
Translates to: VMAMRPMCLKVPALDHPNVRMLC*TSTFHQ
Trigger: TTGGTGAAATGTGCTTGTCCAACAAAGCATCCTAAC...ATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR GCA 90 bp AGAGTCACTGAGGGTCAAAACTCTGTTCCACTGTTTCCTAGGGAGCCATCCAGATATACAAAGCCAGCCTaGAAAGTATTCAAATGTGCA +
Preference number: 2 (lower is better)
Translates to: RVTEGQNSVPLFPREPSRYTKPA*KVFKCA
Trigger: TGCACATTTGAATACTTTGCAGGCTGGCTTTGTATA...TCTGGATGGCTCCCTAGGAAACAGTGGAACAGAGTTTTGACCCTCAGTGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368320.7
3UTR-3UTR TCA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTCTGTGATGAGTTCTaGCCAGTTTTAGTCAAGAAG +
Preference number: 2 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPAFCDEF*PVLVKK
Trigger: CTTCTTGACTAAAACTGGTCAGAACTCATCACAGAA...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR GCA 90 bp GTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATCAGATTCTATGCCACTaGAGAAATAAGGATTTTTGT +
Preference number: 2 (lower is better)
Translates to: VMAMRPMCLKVPALDHPNQILCH*RNKDFC
Trigger: ACAAAAATCCTTATTTCTGCAGTGGCATAGAATCTG...ATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR GCA 90 bp TGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTACGACCCTGTTAGGATaGTTTGTTGGACAAGCACAT +
Preference number: 2 (lower is better)
Translates to: CFSCNQFWERETTVFHFCTTLLG*FVGQAH
Trigger: ATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGT...ACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR CCA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACAGTTAGGATGCTTTGTTaGACAAGCACATTTCACCAA +
Preference number: 2 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTVRMLC*TSTFHQ
Trigger: TTGGTGAAATGTGCTTGTCCAACAAAGCATCCTAAC...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR CCA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATCTTTATGTCAGAACTaGGGCTATTCACCTGGAAAA +
Preference number: 2 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTSLCQN*GYSPGK
Trigger: TTTTCCAGGTGAATAGCCCCAGTTCTGACATAAAGA...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR CCA 90 bp AGAGTCACTGAGGGTCAAAACTCTGTTCCACTGTTTCCTAGGGAGCCATCCAGATTTCTAGATACACGTTaGTTGGAAACAAAAGGTTGT +
Preference number: 2 (lower is better)
Translates to: RVTEGQNSVPLFPREPSRFLDTR*LETKGC
Trigger: ACAACCTTTTGTTTCCAACCAACGTGTATCTAGAAA...TCTGGATGGCTCCCTAGGAAACAGTGGAACAGAGTTTTGACCCTCAGTGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368320.7
3UTR-3UTR GCA 90 bp CAACATATAGGAAACCAGAGGATAAGTTTATACAAAGCCAGCCTGCAAAGTATTGCTATGAGACCAATGTaGCTGAAGGTGCCAGCTTTG +
Preference number: 2 (lower is better)
Translates to: QHIGNQRISLYKASLQSIAMRPM*LKVPAL
Trigger: CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGC...AATACTTTGCAGGCTGGCTTTGTATAAACTTATCCTCTGGTTTCCTATATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR CCA 90 bp GCCAAGAAAAAGGACAATTTGCAATTTCAGTCATTAAGTCCAAAATCCTATAGCCTGGGGCTATTCACCTaGAAAAGGCTGACCAGGTCA +
Preference number: 2 (lower is better)
Translates to: AKKKDNLQFQSLSPKSYSLGLFT*KRLTRS
Trigger: TGACCTGGTCAGCCTTTTCCAGGTGAATAGCCCCAG...GCTATAGGATTTTGGACTTAATGACTGAAATTGCAAATTGTCCTTTTTCTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR TCA 90 bp CAACATATAGGAAACCAGAGGATAAGTTTATACAAAGCCAGCCTGCAAAGTATTGCTAAGAAGAGTCACTaGGGGTCAAAACTCTGTTCC +
Preference number: 2 (lower is better)
Translates to: QHIGNQRISLYKASLQSIAKKSH*GSKLCS
Trigger: GGAACAGAGTTTTGACCCTCAGTGACTCTTCTTAGC...AATACTTTGCAGGCTGGCTTTGTATAAACTTATCCTCTGGTTTCCTATATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR GCA 90 bp GGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATCAGATTCTATGCCACTaGAGAAATAAGGATTTTTGT +
Preference number: 2 (lower is better)
Translates to: GQMCMGTTLLGCFVGQAHQILCH*RNKDFC
Trigger: ACAAAAATCCTTATTTCTGCAGTGGCATAGAATCTG...ATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR TCA 90 bp CCAACAGATTATAGAGGTTGGATTAAACACCTGAATGAACATCAGGTTAGAAAATCACCTGGAAAAGGCTaGCCAGGTCAAATGTGTATG +
Preference number: 2 (lower is better)
Translates to: PTDYRGWIKHLNEHQVRKSPGKG*PGQMCM
Trigger: CATACACATTTGACCTGGTCAGCCTTTTCCAGGTGA...TTTTCTAACCTGATGTTCATTCAGGTGTTTAATCCAACCTCTATAATCTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368320.7
3UTR-3UTR GCA 90 bp CAACATATAGGAAACCAGAGGATAAGTTTATACAAAGCCAGCCTGCAAAGTATTACGACCCTGTTAGGATaGTTTGTTGGACAAGCACAT +
Preference number: 2 (lower is better)
Translates to: QHIGNQRISLYKASLQSITTLLG*FVGQAH
Trigger: ATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGT...AATACTTTGCAGGCTGGCTTTGTATAAACTTATCCTCTGGTTTCCTATATGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR CAA 90 bp GTTAATTTTAAGTGGTTAGTTGGACACCATTTTGAGGTCACAGGGTCAATGGTCGGCAGTGGTCTGATCTaGGCTCACTGCAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: VNFKWLVGHHFEVTGSMVGSGLI*AHCNLC
Trigger: GCAGAGGTTGCAGTGAGCCAAGATCAGACCACTGCC...GACCATTGACCCTGTGACCTCAAAATGGTGTCCAACTAACCACTTAAAATTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368320.7
3UTR TCA 72 bp TTATGTCAGAACTGGGGCTATTCACCTGGAAAAGGCTaGCCAGGTCAAATGTGTATGGGAACGACCCTGTTA +
Preference number: 3 (lower is better)
Translates to: LCQNWGYSPGKG*PGQMCMGTTLL
Trigger: TAACAGGGTCGTTCCCATACACATTTGACCTGGTCAGCCTTTTCCAGGTGAATAGCCCCAGTTCTGACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR CAA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACAACAGGCCCCAGAGTCTaGTTAAATCAAATGCATGCA +
Preference number: 3 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTTGPRV*LNQMHA
Trigger: TGCATGCATTTGATTTAACAAGACTCTGGGGCCTGT...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR CAA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTACAGGCCCCAGAGTCTaGTTAAATCAAATGCATGCA +
Preference number: 3 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPATGPRV*LNQMHA
Trigger: TGCATGCATTTGATTTAACAAGACTCTGGGGCCTGT...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR TCA 72 bp TTTGAGGTCACAGGGTCAATGGTCACCCAAAAACGTTaGAGATCACACGAAAAACAGCACCAGCATCAGCAA +
Preference number: 3 (lower is better)
Translates to: FEVTGSMVTQKR*RSHEKQHQHQQ
Trigger: TTGCTGATGCTGGTGCTGTTTTTCGTGTGATCTTCAACGTTTTTGGGTGACCATTGACCCTGTGACCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368320.7
3UTR CCA 72 bp GCAGTCAGATCTCTCTGTTTTAGCTGCAACCAGTTCTaGGAGAGAGAGACCACTGTATTTCATTTCTGTGAT +
Preference number: 3 (lower is better)
Translates to: AVRSLCFSCNQF*ERETTVFHFCD
Trigger: ATCACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACAGAGAGATCTGACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR CAA 90 bp GGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATCAAATGCATGCATTATaGCTAAGAAGAGTCACTGAG +
Preference number: 3 (lower is better)
Translates to: GQMCMGTTLLGCFVGQAHQMHAL*LRRVTE
Trigger: CTCAGTGACTCTTCTTAGCAATAATGCATGCATTTG...ATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR-3UTR CAA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACACCTGTGGAAAACTACTaGCATTTTTATGACCTCCAT +
Preference number: 3 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTPVENY*HFYDLH
Trigger: ATGGAGGTCATAAAAATGCAAGTAGTTTTCCACAGG...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368320.7
3UTR TCA 72 bp AAACTCCAGCCCTGTGGAAAACTACTTGCATTTTTATaGCCTCCATGTTCCTCCTCTTCATCAGATGAATCT +
Preference number: 3 (lower is better)
Translates to: KLQPCGKLLAFL*PPCSSSSSDES
Trigger: AGATTCATCTGATGAAGAGGAGGAACATGGAGGTCATAAAAATGCAAGTAGTTTTCCACAGGGCTGGAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368320.7
3UTR-3UTR CAA 90 bp GCCAAGAAAAAGGACAATTTGCAATTTCAGTCATTAAGTCCAAAATCCTATAGCCAAATGCATGCATTATaGCTAAGAAGAGTCACTGAG +
Preference number: 3 (lower is better)
Translates to: AKKKDNLQFQSLSPKSYSQMHAL*LRRVTE
Trigger: CTCAGTGACTCTTCTTAGCAATAATGCATGCATTTG...GCTATAGGATTTTGGACTTAATGACTGAAATTGCAAATTGTCCTTTTTCTTGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
3UTR TCA 72 bp TGGTATTCACATAATATAGGCAACAGGATTTTGAAATaGCCTACCACTCATTACTATTCACTGATGCTATGT +
Preference number: 3 (lower is better)
Translates to: WYSHNIGNRILK*PTTHYYSLMLC
Trigger: ACATAGCATCAGTGAATAGTAATGAGTGGTAGGTCATTTCAAAATCCTGTTGCCTATATTATGTGAATACCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368320.7
3UTR CCA 72 bp CAAAAGTATTTTCACTGGCCAACAGATTATAGAGGTTaGATTAAACACCTGAATGAACATCAGGTTAGAAAA +
Preference number: 3 (lower is better)
Translates to: QKYFHWPTDYRG*IKHLNEHQVRK
Trigger: TTTTCTAACCTGATGTTCATTCAGGTGTTTAATCCAACCTCTATAATCTGTTGGCCAGTGAAAATACTTTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR GCA 90 bp GTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATCTGGTTGGTCCCATTTaGTGCGGCGCCCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VMAMRPMCLKVPALDHPNLVGPI*CGARQL
Trigger: GAGCTGGCGGGCGCCGCAGCAAATGGGACCAACCAG...ATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTGGTGACCTCCCCACCTaGGGCCGCTGGCGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPAGDLPT*GRWREE
Trigger: TTCCTCCCGCCAGCGGCCCCAGGTGGGGAGGTCACC...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp CTGGAATTACAGGCGCCCACCACCATGCCCGCTAGTTTTTGTATTTTTAGTAGAGTTGGTCCCATTTGCTaGGGCGCCCGCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LELQAPTTMPASFCIFSRVGPIC*GARQLQ
Trigger: CTGGAGCTGGCGGGCGCCGCAGCAAATGGGACCAAC...TCTACTAAAAATACAAAAACTAGCGGGCATGGTGGTGGGCGCCTGTAATTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR GCA 90 bp GGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATGTTGGTCCCATTTGCTaGGGCGCCCGCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GQMCMGTTLLGCFVGQAHVGPIC*GARQLQ
Trigger: CTGGAGCTGGCGGGCGCCGCAGCAAATGGGACCAAC...ATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CTGGAATTACAGGCGCCCACCACCATGCCCGCTAGTTTTTGTATTTTTAGTAGAGGGGCTGGAGCTGGTTaGTCCCATTTGCTGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LELQAPTTMPASFCIFSRGAGAG*SHLLRR
Trigger: GCGCCGCAGCAAATGGGACCAACCAGCTCCAGCCCC...TCTACTAAAAATACAAAAACTAGCGGGCATGGTGGTGGGCGCCTGTAATTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CCA 90 bp GGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATGGGGCTGGAGCTGGTTaGTCCCATTTGCTGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GQMCMGTTLLGCFVGQAHGAGAG*SHLLRR
Trigger: GCGCCGCAGCAAATGGGACCAACCAGCTCCAGCCCC...ATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTGGTGACCTCCCCACCTaGGGCCGCTGGCGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: CFSCNQFWERETTVFHFCGDLPT*GRWREE
Trigger: TTCCTCCCGCCAGCGGCCCCAGGTGGGGAGGTCACC...ACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CTAACTTCTGCAAAGGTCCAGATGGTTCCCAGCACAGGCCCCAGAGTCTTGTTACTGCAAAGGTCCAGATaGTTCCCAGCACAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LTSAKVQMVPSTGPRVLLLQRSR*FPAQAP
Trigger: TGGGGCCTGTGCTGGGAACCATCTGGACCTTTGCAG...TAACAAGACTCTGGGGCCTGTGCTGGGAACCATCTGGACCTTTGCAGAAGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGCTGGTTGGTCCCATTTaGTGCGGCGCCCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALLVGPI*CGARQL
Trigger: GAGCTGGCGGGCGCCGCAGCAAATGGGACCAACCAG...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp CTAACTTCTGCAAAGGTCCAGATGGTTCCCAGCACAGGCCCCAGAGTCTTGTTACAGCTGGTGGCACTATaGTTGGTACTCCGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: LTSAKVQMVPSTGPRVLLQLVAL*LVLRRE
Trigger: CTCCCTACGGAGTACCAAGCATAGTGCCACCAGCTG...TAACAAGACTCTGGGGCCTGTGCTGGGAACCATCTGGACCTTTGCAGAAGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp AATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATTACGGGAGGAAGAGAAGTaGGGCTGGAGCTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: NGYETNVPEGASFGSPQLREEEK*GWSWLV
Trigger: GACCAACCAGCTCCAGCCCCACTTCTCTTCCTCCCG...TAATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTCTGAAGGAGCAGCTGTaGTGCCCCCAGGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPALKEQL*CPQDFP
Trigger: GGGGAAGTCCTGGGGGCACCACAGCTGCTCCTTCAG...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp GGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATCTGAAGGAGCAGCTGTaGTGCCCCCAGGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: GQMCMGTTLLGCFVGQAHLKEQL*CPQDFP
Trigger: GGGGAAGTCCTGGGGGCACCACAGCTGCTCCTTCAG...ATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CTGGAATTACAGGCGCCCACCACCATGCCCGCTAGTTTTTGTATTTTTAGTAGACGCTCCCCGCGGACATaGCGACCGCTTCTACTCAAC +
Preference number: 4 (lower is better)
Translates to: LELQAPTTMPASFCIFSRRSPRT*RPLLLN
Trigger: GTTGAGTAGAAGCGGTCGCCATGTCCGCGGGGAGCG...TCTACTAAAAATACAAAAACTAGCGGGCATGGTGGTGGGCGCCTGTAATTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CCA 90 bp TTTATGTCAGAACTGGGGCTATTCACCTGGAAAAGGCTGACCAGGTCAAATGTGCGCTCCCCGCGGACATaGCGACCGCTTCTACTCAAC +
Preference number: 4 (lower is better)
Translates to: FMSELGLFTWKRLTRSNVRSPRT*RPLLLN
Trigger: GTTGAGTAGAAGCGGTCGCCATGTCCGCGGGGAGCG...CACATTTGACCTGGTCAGCCTTTTCCAGGTGAATAGCCCCAGTTCTGACATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp GTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATGTAGGGAGGTTGAACTaGCTGCTGAGGAGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: VMAMRPMCLKVPALDHPNVGRLN*LLRRGN
Trigger: GTTCCCCCTCCTCAGCAGCCAGTTCAACCTCCCTAC...ATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp TTTATGTCAGAACTGGGGCTATTCACCTGGAAAAGGCTGACCAGGTCAAATGTGAGCATCCAAGGCTCCTaGAGGAGCAGCTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: FMSELGLFTWKRLTRSNVSIQGS*RSSCGA
Trigger: GGCACCACAGCTGCTCCTTCAGGAGCCTTGGATGCT...CACATTTGACCTGGTCAGCCTTTTCCAGGTGAATAGCCCCAGTTCTGACATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACAAGCATCCAAGGCTCCTaGAGGAGCAGCTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTSIQGS*RSSCGA
Trigger: GGCACCACAGCTGCTCCTTCAGGAGCCTTGGATGCT...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp CTAACTTCTGCAAAGGTCCAGATGGTTCCCAGCACAGGCCCCAGAGTCTTGTTACCTTTGCCAGGAGCCTaGAGCTTCTCAGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: LTSAKVQMVPSTGPRVLLPLPGA*SFSEAF
Trigger: GAATGCTTCTGAGAAGCTTCAGGCTCCTGGCAAAGG...TAACAAGACTCTGGGGCCTGTGCTGGGAACCATCTGGACCTTTGCAGAAGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTACAGCTGGAGACAACTaGGCGATGGGTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPATAGDN*AMGAGW
Trigger: CCAGCCAGCACCCATCGCTCAGTTGTCTCCAGCTGT...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp CTAACTTCTGCAAAGGTCCAGATGGTTCCCAGCACAGGCCCCAGAGTCTTGTTACTGGTAGCTCCTCTGTaGATCGTCTCTTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LTSAKVQMVPSTGPRVLLLVAPL*IVSSVP
Trigger: AGGCACAGAAGAGACGATTCACAGAGGAGCTACCAG...TAACAAGACTCTGGGGCCTGTGCTGGGAACCATCTGGACCTTTGCAGAAGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGAAGGAGCAGCTGTGGTaGCCCCAGGACTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALKEQLW*PQDFPH
Trigger: GTGGGGGAAGTCCTGGGGGCACCACAGCTGCTCCTT...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp GTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATGAATCGTCTCTTCTGTaGCTGGGGCTGACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: VMAMRPMCLKVPALDHPNESSLL*LGLTWE
Trigger: CTCCCAAGTCAGCCCCAGGCACAGAAGAGACGATTC...ATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp GTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATGGTGGAGGCATCAACTaGCTGTCCCTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VMAMRPMCLKVPALDHPNGGGIN*LSLSLS
Trigger: AGAGAGAGAGAGGGACAGGCAGTTGATGCCTCCACC...ATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CAGTCAGATCTCTCTGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGCACTGGAAAGGCTGGTaGAGGCATCAACTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: QSDLSVLAATSSGRERPLHWKGW*RHQLPV
Trigger: GACAGGCAGTTGATGCCTCCACCAGCCTTTCCAGTG...CAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACAGAGAGATCTGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CAGTCAGATCTCTCTGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGAACCCCCTGAGTAGCTaGAATTACAGGCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: QSDLSVLAATSSGRERPLNPLSS*NYRRPP
Trigger: TGGTGGGCGCCTGTAATTCCAGCTACTCAGGGGGTT...CAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACAGAGAGATCTGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR TCA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTCGGCTGATCTCGTCTTaGGTCTGTCCTCGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPARLISS*VCPRVS
Trigger: GCTGACTCGAGGACAGACTCAAGACGAGATCAGCCG...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp GGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATCGGCTGATCTCGTCTTaGGTCTGTCCTCGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: GQMCMGTTLLGCFVGQAHRLISS*VCPRVS
Trigger: GCTGACTCGAGGACAGACTCAAGACGAGATCAGCCG...ATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp AATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATTAGAACCTCCCTCGAGTTaGTACTGCAGCCCCACTAAG +
Preference number: 4 (lower is better)
Translates to: NGYETNVPEGASFGSPQLEPPSS*YCSPTK
Trigger: CTTAGTGGGGCTGCAGTATCAACTCGAGGGAGGTTC...TAATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp AATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATTAGGTGGAGGCATCAACTaGCTGTCCCTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: NGYETNVPEGASFGSPQLGGGIN*LSLSLS
Trigger: AGAGAGAGAGAGGGACAGGCAGTTGATGCCTCCACC...TAATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp CTAACTTCTGCAAAGGTCCAGATGGTTCCCAGCACAGGCCCCAGAGTCTTGTTAGCTATGAGACCAATGTaGCTGAAGGTGCCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LTSAKVQMVPSTGPRVLLAMRPM*LKVPAL
Trigger: CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGC...TAACAAGACTCTGGGGCCTGTGCTGGGAACCATCTGGACCTTTGCAGAAGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTGATGCGGGAGGAAGAGAAGTaGGGCTGGAGCTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: LAATSSGRERPLYFISVMREEEK*GWSWLV
Trigger: GACCAACCAGCTCCAGCCCCACTTCTCTTCCTCCCG...CATCACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CTAACTTCTGCAAAGGTCCAGATGGTTCCCAGCACAGGCCCCAGAGTCTTGTTACCCCTGGTCCCACTTTaGCTTTTTCCTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LTSAKVQMVPSTGPRVLLPLVPL*LFPQLS
Trigger: TGACAACTGAGGAAAAAGCCAAAGTGGGACCAGGGG...TAACAAGACTCTGGGGCCTGTGCTGGGAACCATCTGGACCTTTGCAGAAGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp GTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATTGGTGGCACTATGCTTaGTACTCCGTAGGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VMAMRPMCLKVPALDHPNWWHYA*YSVGRL
Trigger: CAACCTCCCTACGGAGTACCAAGCATAGTGCCACCA...ATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTCTGCAAAGGTCCAGATaGTTCCCAGCACAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPALQRSR*FPAQAP
Trigger: TGGGGCCTGTGCTGGGAACCATCTGGACCTTTGCAG...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp AATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATTACAACTGAGCGATGGGTaGTGGCTGGTGATAGACAGT +
Preference number: 4 (lower is better)
Translates to: NGYETNVPEGASFGSPQLQLSDG*WLVIDS
Trigger: ACTGTCTATCACCAGCCAGCACCCATCGCTCAGTTG...TAATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACACAGATGCTGGCTCAATaGAGCCTGAACCTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTQMLAQ*SLNLCP
Trigger: GGGGCAAAGGTTCAGGCTGCATTGAGCCAGCATCTG...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp TATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATTTCACCAACTGCAGCTGGTGGCACTATaGTTGGTACTCCGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: YGNDPVRMLCWTSTFHQLQLVAL*LVLRRE
Trigger: CTCCCTACGGAGTACCAAGCATAGTGCCACCAGCTG...CAGTTGGTGAAATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTGATGAAGTGGGGCTGGAGCTaGTTGGTCCCATTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: LAATSSGRERPLYFISVMKWGWS*LVPFAA
Trigger: CGCAGCAAATGGGACCAACCAGCTCCAGCCCCACTT...CATCACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp GTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATCAAATAGGAGCAGCCTaGACCTTCCACCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VMAMRPMCLKVPALDHPNQIGAA*TFHLLL
Trigger: AAGGAGAAGGTGGAAGGTCCAGGCTGCTCCTATTTG...ATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CAGTCAGATCTCTCTGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGCAAATAGGAGCAGCCTaGACCTTCCACCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: QSDLSVLAATSSGRERPLQIGAA*TFHLLL
Trigger: AAGGAGAAGGTGGAAGGTCCAGGCTGCTCCTATTTG...CAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACAGAGAGATCTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp CTAACTTCTGCAAAGGTCCAGATGGTTCCCAGCACAGGCCCCAGAGTCTTGTTATTTCCTCAGTTGTCATaGACCTCCCTCGAGTTGATA +
Preference number: 4 (lower is better)
Translates to: LTSAKVQMVPSTGPRVLLFPQLS*TSLELI
Trigger: TATCAACTCGAGGGAGGTTCATGACAACTGAGGAAA...TAACAAGACTCTGGGGCCTGTGCTGGGAACCATCTGGACCTTTGCAGAAGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp AGAGTCACTGAGGGTCAAAACTCTGTTCCACTGTTTCCTAGGGAGCCATCCAGACCTTCAATCTCATTCTaGCTGGAGAAGCCTGTACCT +
Preference number: 4 (lower is better)
Translates to: RVTEGQNSVPLFPREPSRPSISF*LEKPVP
Trigger: AGGTACAGGCTTCTCCAGTCAGAATGAGATTGAAGG...TCTGGATGGCTCCCTAGGAAACAGTGGAACAGAGTTTTGACCCTCAGTGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR TCA 90 bp GTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATCTCCTCTTCATCAGATaGATCTGCAGCATAAGCCAC +
Preference number: 4 (lower is better)
Translates to: VMAMRPMCLKVPALDHPNLLFIR*ICSISH
Trigger: GTGGCTTATGCTGCAGATTCATCTGATGAAGAGGAG...ATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp CAGTCAGATCTCTCTGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTCACCTGGAAAAGGCTaGCCAGGTCAAATGTGTATG +
Preference number: 4 (lower is better)
Translates to: QSDLSVLAATSSGRERPLSPGKG*PGQMCM
Trigger: CATACACATTTGACCTGGTCAGCCTTTTCCAGGTGA...CAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACAGAGAGATCTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGCAGATGCTGGCTCAATaGAGCCTGAACCTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALQMLAQ*SLNLCP
Trigger: GGGGCAAAGGTTCAGGCTGCATTGAGCCAGCATCTG...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp CAGTCAGATCTCTCTGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTGCTGGCTTCGATCCTaGACCTTCAATCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: QSDLSVLAATSSGRERPLCWLRS*TFNLIL
Trigger: CAGAATGAGATTGAAGGTGCAGGATCGAAGCCAGCA...CAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACAGAGAGATCTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTCCCTCTCTCTCTCTTTaGCTGAGGAACTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPAPSLSL*LRNLLA
Trigger: AGCCAGCAAGTTCCTCAGGCAAAGAGAGAGAGAGGG...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CTAACTTCTGCAAAGGTCCAGATGGTTCCCAGCACAGGCCCCAGAGTCTTGTTATGCACCATTAAAAGTTaGACTTGTTCCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LTSAKVQMVPSTGPRVLLCTIKS*TCSCGS
Trigger: GCTGCCACAGGAACAAGTCCAACTTTTAATGGTGCA...TAACAAGACTCTGGGGCCTGTGCTGGGAACCATCTGGACCTTTGCAGAAGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTCTGAGCGATGGGTGCTaGCTGGTGATAGACAGTTAC +
Preference number: 4 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPALSDGC*LVIDSY
Trigger: GTAACTGTCTATCACCAGCCAGCACCCATCGCTCAG...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTGAGACAACTGAGCGATaGGTGCTGGCTGGTGATAGA +
Preference number: 4 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPAETTER*VLAGDR
Trigger: TCTATCACCAGCCAGCACCCATCGCTCAGTTGTCTC...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATCTCACAAAGCTTCTTaGCAGCAGCCAGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTSHKAS*QQPGLL
Trigger: CAGAAGGCCTGGCTGCTGCCAAGAAGCTTTGTGAGA...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp GGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATTCTCACAAAGCTTCTTaGCAGCAGCCAGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GQMCMGTTLLGCFVGQAHSHKAS*QQPGLL
Trigger: CAGAAGGCCTGGCTGCTGCCAAGAAGCTTTGTGAGA...ATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATTTCACCAACTGAGTCACTGGAAAGGCTaGTGGAGGCATCAACTGCCT +
Preference number: 4 (lower is better)
Translates to: YGNDPVRMLCWTSTFHQLSHWKG*WRHQLP
Trigger: AGGCAGTTGATGCCTCCACCAGCCTTTCCAGTGACT...CAGTTGGTGAAATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACAAGTCACTGGAAAGGCTaGTGGAGGCATCAACTGCCT +
Preference number: 4 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTSHWKG*WRHQLP
Trigger: AGGCAGTTGATGCCTCCACCAGCCTTTCCAGTGACT...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TTTATGTCAGAACTGGGGCTATTCACCTGGAAAAGGCTGACCAGGTCAAATGTGCTGGGGCTATTCACCTaGAAAAGGCTGACCAGGTCA +
Preference number: 4 (lower is better)
Translates to: FMSELGLFTWKRLTRSNVLGLFT*KRLTRS
Trigger: TGACCTGGTCAGCCTTTTCCAGGTGAATAGCCCCAG...CACATTTGACCTGGTCAGCCTTTTCCAGGTGAATAGCCCCAGTTCTGACATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp AGAGTCACTGAGGGTCAAAACTCTGTTCCACTGTTTCCTAGGGAGCCATCCAGATTCTCAGAAGCATTCTaGGTTGGTTTCAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: RVTEGQNSVPLFPREPSRFSEAF*VGFSFP
Trigger: AGGGAAGCTGAAACCAACTCAGAATGCTTCTGAGAA...TCTGGATGGCTCCCTAGGAAACAGTGGAACAGAGTTTTGACCCTCAGTGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR TCA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTAACATAATGCATCCCTaGCTGGAAGGGAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPANIMHP*LEGRLL
Trigger: CAGAAGCCTCCCTTCCAGTCAGGGATGCATTATGTT...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACAAACATAATGCATCCCTaGCTGGAAGGGAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTNIMHP*LEGRLL
Trigger: CAGAAGCCTCCCTTCCAGTCAGGGATGCATTATGTT...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp GTTAATTTTAAGTGGTTAGTTGGACACCATTTTGAGGTCACAGGGTCAATGGTCTGGAGGGCAGTGGTCTaGTCTTGGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: VNFKWLVGHHFEVTGSMVWRAVV*SWLTAT
Trigger: GGTTGCAGTGAGCCAAGATCAGACCACTGCCCTCCA...GACCATTGACCCTGTGACCTCAAAATGGTGTCCAACTAACCACTTAAAATTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR TCA 90 bp AATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATTAAGTTGGACACCATTTTaGGGTCACAGGGTCAATGGT +
Preference number: 4 (lower is better)
Translates to: NGYETNVPEGASFGSPQLSWTPF*GHRVNG
Trigger: ACCATTGACCCTGTGACCTCAAAATGGTGTCCAACT...TAATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR TCA 90 bp AATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATTATCACCTGGAAAAGGCTaGCCAGGTCAAATGTGTATG +
Preference number: 4 (lower is better)
Translates to: NGYETNVPEGASFGSPQLSPGKG*PGQMCM
Trigger: CATACACATTTGACCTGGTCAGCCTTTTCCAGGTGA...TAATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGCAACTGAGCGATGGGTaGTGGCTGGTGATAGACAGT +
Preference number: 4 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALQLSDG*WLVIDS
Trigger: ACTGTCTATCACCAGCCAGCACCCATCGCTCAGTTG...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTGATGGAAGAGAAGTGGGGCTaGAGCTGGTTGGTCCCATTT +
Preference number: 4 (lower is better)
Translates to: LAATSSGRERPLYFISVMEEKWG*SWLVPF
Trigger: AAATGGGACCAACCAGCTCCAGCCCCACTTCTCTTC...CATCACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTGATGGAGACAACTGAGCGATaGGTGCTGGCTGGTGATAGA +
Preference number: 4 (lower is better)
Translates to: LAATSSGRERPLYFISVMETTER*VLAGDR
Trigger: TCTATCACCAGCCAGCACCCATCGCTCAGTTGTCTC...CATCACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTGATGCTTCTGGCTAACAGCTaGAGACAACTGAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: LAATSSGRERPLYFISVMLLANS*RQLSDG
Trigger: CCCATCGCTCAGTTGTCTCCAGCTGTTAGCCAGAAG...CATCACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTGATGAGCCTTCCAAGCCGCTaGAATTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: LAATSSGRERPLYFISVMSLPSR*NYRHAP
Trigger: TGGTGCATGCCTGTAATTCCAGCGGCTTGGAAGGCT...CATCACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CCA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGCTGGGGCTATTCACCTaGAAAAGGCTGACCAGGTCA +
Preference number: 4 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALLGLFT*KRLTRS
Trigger: TGACCTGGTCAGCCTTTTCCAGGTGAATAGCCCCAG...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp CAACATATAGGAAACCAGAGGATAAGTTTATACAAAGCCAGCCTGCAAAGTATTACAGCTGGAGACAACTaGGCGATGGGTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QHIGNQRISLYKASLQSITAGDN*AMGAGW
Trigger: CCAGCCAGCACCCATCGCTCAGTTGTCTCCAGCTGT...AATACTTTGCAGGCTGGCTTTGTATAAACTTATCCTCTGGTTTCCTATATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp TTTATGTCAGAACTGGGGCTATTCACCTGGAAAAGGCTGACCAGGTCAAATGTGCCTTCAATCTCATTCTaGCTGGAGAAGCCTGTACCT +
Preference number: 4 (lower is better)
Translates to: FMSELGLFTWKRLTRSNVPSISF*LEKPVP
Trigger: AGGTACAGGCTTCTCCAGTCAGAATGAGATTGAAGG...CACATTTGACCTGGTCAGCCTTTTCCAGGTGAATAGCCCCAGTTCTGACATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp TATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATTTCACCAACTGGCTAAGAAGAGTCACTaGGGGTCAAAACTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: YGNDPVRMLCWTSTFHQLAKKSH*GSKLCS
Trigger: GGAACAGAGTTTTGACCCTCAGTGACTCTTCTTAGC...CAGTTGGTGAAATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp GTTAATTTTAAGTGGTTAGTTGGACACCATTTTGAGGTCACAGGGTCAATGGTCTGCAGCCTGAACCTTTaGCCCGCAGGAAGACTTTGG +
Preference number: 4 (lower is better)
Translates to: VNFKWLVGHHFEVTGSMVCSLNL*PAGRLW
Trigger: CCAAAGTCTTCCTGCGGGGCAAAGGTTCAGGCTGCA...GACCATTGACCCTGTGACCTCAAAATGGTGTCCAACTAACCACTTAAAATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR GCA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGCTATGAGACCAATGTaGCTGAAGGTGCCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALAMRPM*LKVPAL
Trigger: CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGC...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTTGGTGGCACTATGCTTaGTACTCCGTAGGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: CFSCNQFWERETTVFHFCWWHYA*YSVGRL
Trigger: CAACCTCCCTACGGAGTACCAAGCATAGTGCCACCA...ACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp AGAGTCACTGAGGGTCAAAACTCTGTTCCACTGTTTCCTAGGGAGCCATCCAGAATTGGATGGATAATATaGTGGTTGAGGAGGGACACT +
Preference number: 4 (lower is better)
Translates to: RVTEGQNSVPLFPREPSRIGWII*WLRRDT
Trigger: AGTGTCCCTCCTCAACCACCATATTATCCATCCAAT...TCTGGATGGCTCCCTAGGAAACAGTGGAACAGAGTTTTGACCCTCAGTGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CCA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTATATCACACTCACCATaGCTCCCTGTTAAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPAISHSP*LPVKVP
Trigger: TGGGACCTTAACAGGGAGCCATGGTGAGTGTGATAT...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR TCA 90 bp TTTATGTCAGAACTGGGGCTATTCACCTGGAAAAGGCTGACCAGGTCAAATGTGTTCTCAGAAGCATTCTaGGTTGGTTTCAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: FMSELGLFTWKRLTRSNVFSEAF*VGFSFP
Trigger: AGGGAAGCTGAAACCAACTCAGAATGCTTCTGAGAA...CACATTTGACCTGGTCAGCCTTTTCCAGGTGAATAGCCCCAGTTCTGACATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp CAACATATAGGAAACCAGAGGATAAGTTTATACAAAGCCAGCCTGCAAAGTATTTGGCTCAATGCAGCCTaGACCTTTGCCCCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: QHIGNQRISLYKASLQSIWLNAA*TFAPQE
Trigger: TTCCTGCGGGGCAAAGGTTCAGGCTGCATTGAGCCA...AATACTTTGCAGGCTGGCTTTGTATAAACTTATCCTCTGGTTTCCTATATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACACAGCATCAGCAAATGTaGATCCACCAGAACCATGTA +
Preference number: 4 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTQHQQM*IHQNHV
Trigger: TACATGGTTCTGGTGGATTCACATTTGCTGATGCTG...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR TCA 90 bp AATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATTACTACTTGCATTTTTATaGCCTCCATGTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NGYETNVPEGASFGSPQLLLAFL*PPCSSS
Trigger: AGAGGAGGAACATGGAGGTCATAAAAATGCAAGTAG...TAATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp TTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTGATGGCTAAGAAGAGTCACTaGGGGTCAAAACTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LAATSSGRERPLYFISVMAKKSH*GSKLCS
Trigger: GGAACAGAGTTTTGACCCTCAGTGACTCTTCTTAGC...CATCACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp CAGTCAGATCTCTCTGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTTCTGTGATGAGTTCTaGCCAGTTTTAGTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: QSDLSVLAATSSGRERPLFCDEF*PVLVKK
Trigger: CTTCTTGACTAAAACTGGTCAGAACTCATCACAGAA...CAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACAGAGAGATCTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACAACGACCCTGTTAGGATaGTTTGTTGGACAAGCACAT +
Preference number: 4 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTTTLLG*FVGQAH
Trigger: ATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGT...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp GGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATACGACCCTGTTAGGATaGTTTGTTGGACAAGCACAT +
Preference number: 4 (lower is better)
Translates to: GQMCMGTTLLGCFVGQAHTTLLG*FVGQAH
Trigger: ATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGT...ATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATCTCTCTGTTTTAGCTaGAACCAGTTCTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTSLCFS*NQFWER
Trigger: TCTCTCCCAGAACTGGTTGCAGCTAAAACAGAGAGA...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp GGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATTTGGACTTGTTCCTGTaGCAGCTTTTACCACTCCAT +
Preference number: 4 (lower is better)
Translates to: GQMCMGTTLLGCFVGQAHLDLFL*QLLPLH
Trigger: ATGGAGTGGTAAAAGCTGCCACAGGAACAAGTCCAA...ATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTGATGCCCGCAGGAAGACTTTaGCACCTGTTTCAATCTGAA +
Preference number: 4 (lower is better)
Translates to: LAATSSGRERPLYFISVMPAGRL*HLFQSE
Trigger: TTCAGATTGAAACAGGTGCCAAAGTCTTCCTGCGGG...CATCACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp AATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATTAATTGGATGGATAATATaGTGGTTGAGGAGGGACACT +
Preference number: 4 (lower is better)
Translates to: NGYETNVPEGASFGSPQLIGWII*WLRRDT
Trigger: AGTGTCCCTCCTCAACCACCATATTATCCATCCAAT...TAATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp AATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATTACTGATAGCCATTGGATaGATAATATGGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: NGYETNVPEGASFGSPQLLIAIG*IIWWLR
Trigger: CCTCAACCACCATATTATCCATCCAATGGCTATCAG...TAATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CAGTCAGATCTCTCTGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGCAATCTCATTCTGACTaGAGAAGCCTGTACCTAAAT +
Preference number: 4 (lower is better)
Translates to: QSDLSVLAATSSGRERPLQSHSD*RSLYLN
Trigger: ATTTAGGTACAGGCTTCTCCAGTCAGAATGAGATTG...CAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACAGAGAGATCTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp GTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATCAAACTCCAGCCCTGTaGAAAACTACTTGCATTTTT +
Preference number: 4 (lower is better)
Translates to: VMAMRPMCLKVPALDHPNQTPAL*KTTCIF
Trigger: AAAAATGCAAGTAGTTTTCCACAGGGCTGGAGTTTG...ATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CAGTCAGATCTCTCTGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGGTTAGGATGCTTTGTTaGACAAGCACATTTCACCAA +
Preference number: 4 (lower is better)
Translates to: QSDLSVLAATSSGRERPLVRMLC*TSTFHQ
Trigger: TTGGTGAAATGTGCTTGTCCAACAAAGCATCCTAAC...CAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACAGAGAGATCTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp AATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATTATTTCATCTTCTTGGCTaGATAATCATGGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: NGYETNVPEGASFGSPQLFHLLG*IIMAPC
Trigger: ACAGGGAGCCATGATTATCCAGCCAAGAAGATGAAA...TAATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368321.8
CDS-3UTR TCA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGTTTCCTCAGTTGTCATaGACCTCCCTCGAGTTGATA +
Preference number: 4 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALFPQLS*TSLELI
Trigger: TATCAACTCGAGGGAGGTTCATGACAACTGAGGAAA...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp GCCAAGAAAAAGGACAATTTGCAATTTCAGTCATTAAGTCCAAAATCCTATAGCTGGCTCAATGCAGCCTaGACCTTTGCCCCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: AKKKDNLQFQSLSPKSYSWLNAA*TFAPQE
Trigger: TTCCTGCGGGGCAAAGGTTCAGGCTGCATTGAGCCA...GCTATAGGATTTTGGACTTAATGACTGAAATTGCAAATTGTCCTTTTTCTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTCTACTTGCATTTTTATaGCCTCCATGTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPALLAFL*PPCSSS
Trigger: AGAGGAGGAACATGGAGGTCATAAAAATGCAAGTAG...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp CAACATATAGGAAACCAGAGGATAAGTTTATACAAAGCCAGCCTGCAAAGTATTTGCAGCCTGAACCTTTaGCCCGCAGGAAGACTTTGG +
Preference number: 4 (lower is better)
Translates to: QHIGNQRISLYKASLQSICSLNL*PAGRLW
Trigger: CCAAAGTCTTCCTGCGGGGCAAAGGTTCAGGCTGCA...AATACTTTGCAGGCTGGCTTTGTATAAACTTATCCTCTGGTTTCCTATATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGTCTCTCTGTTTTAGCTaGAACCAGTTCTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALSLCFS*NQFWER
Trigger: TCTCTCCCAGAACTGGTTGCAGCTAAAACAGAGAGA...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp GCCAAGAAAAAGGACAATTTGCAATTTCAGTCATTAAGTCCAAAATCCTATAGCAAGTGGGGCTGGAGCTaGTTGGTCCCATTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: AKKKDNLQFQSLSPKSYSKWGWS*LVPFAA
Trigger: CGCAGCAAATGGGACCAACCAGCTCCAGCCCCACTT...GCTATAGGATTTTGGACTTAATGACTGAAATTGCAAATTGTCCTTTTTCTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TTAAATCAAATGCATGCATTATTGCTAAGAAGAGTCACTGAGGGTCAAAACTCTGTAGGGAGGTTGAACTaGCTGCTGAGGAGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: LNQMHALLLRRVTEGQNSVGRLN*LLRRGN
Trigger: GTTCCCCCTCCTCAGCAGCCAGTTCAACCTCCCTAC...AGAGTTTTGACCCTCAGTGACTCTTCTTAGCAATAATGCATGCATTTGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp GTTAATTTTAAGTGGTTAGTTGGACACCATTTTGAGGTCACAGGGTCAATGGTCGGGAGCCATCCAGAATaGCATCTGTTGTTTAGCTCG +
Preference number: 4 (lower is better)
Translates to: VNFKWLVGHHFEVTGSMVGSHPE*HLLFSS
Trigger: CGAGCTAAACAACAGATGCCATTCTGGATGGCTCCC...GACCATTGACCCTGTGACCTCAAAATGGTGTCCAACTAACCACTTAAAATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CCA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTATCTCAAACTATTCCTaGTTCAGCAGACTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPAISNYS*FSRLAP
Trigger: AGGAGCTAGTCTGCTGAACCAGGAATAGTTTGAGAT...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp GCCAAGAAAAAGGACAATTTGCAATTTCAGTCATTAAGTCCAAAATCCTATAGCGAACCTCCCTCGAGTTaGTACTGCAGCCCCACTAAG +
Preference number: 4 (lower is better)
Translates to: AKKKDNLQFQSLSPKSYSEPPSS*YCSPTK
Trigger: CTTAGTGGGGCTGCAGTATCAACTCGAGGGAGGTTC...GCTATAGGATTTTGGACTTAATGACTGAAATTGCAAATTGTCCTTTTTCTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGCTAACAGCCACAAACTaGCCATTACTGACCAATAGA +
Preference number: 4 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALLTATN*PLLTNR
Trigger: TCTATTGGTCAGTAATGGTCAGTTTGTGGCTGTTAG...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR GCA 90 bp TTAAATCAAATGCATGCATTATTGCTAAGAAGAGTCACTGAGGGTCAAAACTCTGAATCGTCTCTTCTGTaGCTGGGGCTGACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LNQMHALLLRRVTEGQNSESSLL*LGLTWE
Trigger: CTCCCAAGTCAGCCCCAGGCACAGAAGAGACGATTC...AGAGTTTTGACCCTCAGTGACTCTTCTTAGCAATAATGCATGCATTTGATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp CAACATATAGGAAACCAGAGGATAAGTTTATACAAAGCCAGCCTGCAAAGTATTCCCTCTCTCTCTCTTTaGCTGAGGAACTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QHIGNQRISLYKASLQSIPSLSL*LRNLLA
Trigger: AGCCAGCAAGTTCCTCAGGCAAAGAGAGAGAGAGGG...AATACTTTGCAGGCTGGCTTTGTATAAACTTATCCTCTGGTTTCCTATATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp CAGTCAGATCTCTCTGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGCAGATTCTATGCCACTaGAGAAATAAGGATTTTTGT +
Preference number: 4 (lower is better)
Translates to: QSDLSVLAATSSGRERPLQILCH*RNKDFC
Trigger: ACAAAAATCCTTATTTCTGCAGTGGCATAGAATCTG...CAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACAGAGAGATCTGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGCTGATAGCCATTGGATaGATAATATGGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALLIAIG*IIWWLR
Trigger: CCTCAACCACCATATTATCCATCCAATGGCTATCAG...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CTGGAATTACAGGCGCCCACCACCATGCCCGCTAGTTTTTGTATTTTTAGTAGACAGACTGATAGCCATTaGATGGATAATATGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LELQAPTTMPASFCIFSRQTDSH*MDNMVV
Trigger: AACCACCATATTATCCATCCAATGGCTATCAGTCTG...TCTACTAAAAATACAAAAACTAGCGGGCATGGTGGTGGGCGCCTGTAATTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CCA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACACAATCTCATTCTGACTaGAGAAGCCTGTACCTAAAT +
Preference number: 4 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTQSHSD*RSLYLN
Trigger: ATTTAGGTACAGGCTTCTCCAGTCAGAATGAGATTG...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TTAAATCAAATGCATGCATTATTGCTAAGAAGAGTCACTGAGGGTCAAAACTCTCACTGGAAAGGCTGGTaGAGGCATCAACTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LNQMHALLLRRVTEGQNSHWKGW*RHQLPV
Trigger: GACAGGCAGTTGATGCCTCCACCAGCCTTTCCAGTG...AGAGTTTTGACCCTCAGTGACTCTTCTTAGCAATAATGCATGCATTTGATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACACAAACTCCAGCCCTGTaGAAAACTACTTGCATTTTT +
Preference number: 4 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTQTPAL*KTTCIF
Trigger: AAAAATGCAAGTAGTTTTCCACAGGGCTGGAGTTTG...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTCTTTATGTCAGAACTaGGGCTATTCACCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPASLCQN*GYSPGK
Trigger: TTTTCCAGGTGAATAGCCCCAGTTCTGACATAAAGA...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp GCCAAGAAAAAGGACAATTTGCAATTTCAGTCATTAAGTCCAAAATCCTATAGCCTGGTAGCTCCTCTGTaGATCGTCTCTTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: AKKKDNLQFQSLSPKSYSLVAPL*IVSSVP
Trigger: AGGCACAGAAGAGACGATTCACAGAGGAGCTACCAG...GCTATAGGATTTTGGACTTAATGACTGAAATTGCAAATTGTCCTTTTTCTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp TGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTGTCACCCAAAAACGTTaGAGATCACACGAAAAACAG +
Preference number: 4 (lower is better)
Translates to: CFSCNQFWERETTVFHFCVTQKR*RSHEKQ
Trigger: CTGTTTTTCGTGTGATCTTCAACGTTTTTGGGTGAC...ACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR GCA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGTTTCAGCTTCCCTTTTaGCATGAGCATGGCATTAAT +
Preference number: 4 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALFQLPF*HEHGIN
Trigger: ATTAATGCCATGCTCATGGCAAAAGGGAAGCTGAAA...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CAACATATAGGAAACCAGAGGATAAGTTTATACAAAGCCAGCCTGCAAAGTATTCCCCTGGTCCCACTTTaGCTTTTTCCTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: QHIGNQRISLYKASLQSIPLVPL*LFPQLS
Trigger: TGACAACTGAGGAAAAAGCCAAAGTGGGACCAGGGG...AATACTTTGCAGGCTGGCTTTGTATAAACTTATCCTCTGGTTTCCTATATGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TTAAATCAAATGCATGCATTATTGCTAAGAAGAGTCACTGAGGGTCAAAACTCTCTGAGCGATGGGTGCTaGCTGGTGATAGACAGTTAC +
Preference number: 4 (lower is better)
Translates to: LNQMHALLLRRVTEGQNSLSDGC*LVIDSY
Trigger: GTAACTGTCTATCACCAGCCAGCACCCATCGCTCAG...AGAGTTTTGACCCTCAGTGACTCTTCTTAGCAATAATGCATGCATTTGATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TTAAATCAAATGCATGCATTATTGCTAAGAAGAGTCACTGAGGGTCAAAACTCTCTTCTGGCTAACAGCTaGAGACAACTGAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: LNQMHALLLRRVTEGQNSLLANS*RQLSDG
Trigger: CCCATCGCTCAGTTGTCTCCAGCTGTTAGCCAGAAG...AGAGTTTTGACCCTCAGTGACTCTTCTTAGCAATAATGCATGCATTTGATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CCAACAGATTATAGAGGTTGGATTAAACACCTGAATGAACATCAGGTTAGAAAAAGCAGCCAGGCCTTCTaGTTTGGGGTGACTGATGTA +
Preference number: 4 (lower is better)
Translates to: PTDYRGWIKHLNEHQVRKSSQAF*FGVTDV
Trigger: TACATCAGTCACCCCAAACCAGAAGGCCTGGCTGCT...TTTTCTAACCTGATGTTCATTCAGGTGTTTAATCCAACCTCTATAATCTGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CCA 90 bp TTAAATCAAATGCATGCATTATTGCTAAGAAGAGTCACTGAGGGTCAAAACTCTAGCAGCCAGGCCTTCTaGTTTGGGGTGACTGATGTA +
Preference number: 4 (lower is better)
Translates to: LNQMHALLLRRVTEGQNSSSQAF*FGVTDV
Trigger: TACATCAGTCACCCCAAACCAGAAGGCCTGGCTGCT...AGAGTTTTGACCCTCAGTGACTCTTCTTAGCAATAATGCATGCATTTGATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTGATGCAGACTGATAGCCATTaGATGGATAATATGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LAATSSGRERPLYFISVMQTDSH*MDNMVV
Trigger: AACCACCATATTATCCATCCAATGGCTATCAGTCTG...CATCACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CAACATATAGGAAACCAGAGGATAAGTTTATACAAAGCCAGCCTGCAAAGTATTCTGTCCAGTGCTAGCTaGAGGCTGCACTTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: QHIGNQRISLYKASLQSILSSAS*RLHLCY
Trigger: ATAACACAAGTGCAGCCTCCAGCTAGCACTGGACAG...AATACTTTGCAGGCTGGCTTTGTATAAACTTATCCTCTGGTTTCCTATATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp TGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTTTCTGTGATGAGTTCTaGCCAGTTTTAGTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: CFSCNQFWERETTVFHFCFCDEF*PVLVKK
Trigger: CTTCTTGACTAAAACTGGTCAGAACTCATCACAGAA...ACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTATAGACAGTTACTGTTaGACCATTAAAAGTTGGACT +
Preference number: 4 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPAIDSYC*TIKSWT
Trigger: AGTCCAACTTTTAATGGTGCAACAGTAACTGTCTAT...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp TTTATGTCAGAACTGGGGCTATTCACCTGGAAAAGGCTGACCAGGTCAAATGTGATAGACAGTTACTGTTaGACCATTAAAAGTTGGACT +
Preference number: 4 (lower is better)
Translates to: FMSELGLFTWKRLTRSNVIDSYC*TIKSWT
Trigger: AGTCCAACTTTTAATGGTGCAACAGTAACTGTCTAT...CACATTTGACCTGGTCAGCCTTTTCCAGGTGAATAGCCCCAGTTCTGACATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp CCAACAGATTATAGAGGTTGGATTAAACACCTGAATGAACATCAGGTTAGAAAAGTGCTAGCTGGAGGCTaGACTTGTGTTATCGGGTAT +
Preference number: 4 (lower is better)
Translates to: PTDYRGWIKHLNEHQVRKVLAGG*TCVIGY
Trigger: ATACCCGATAACACAAGTGCAGCCTCCAGCTAGCAC...TTTTCTAACCTGATGTTCATTCAGGTGTTTAATCCAACCTCTATAATCTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR GCA 90 bp GCCAAGAAAAAGGACAATTTGCAATTTCAGTCATTAAGTCCAAAATCCTATAGCGTGCTAGCTGGAGGCTaGACTTGTGTTATCGGGTAT +
Preference number: 4 (lower is better)
Translates to: AKKKDNLQFQSLSPKSYSVLAGG*TCVIGY
Trigger: ATACCCGATAACACAAGTGCAGCCTCCAGCTAGCAC...GCTATAGGATTTTGGACTTAATGACTGAAATTGCAAATTGTCCTTTTTCTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp GCCAAGAAAAAGGACAATTTGCAATTTCAGTCATTAAGTCCAAAATCCTATAGCCTGTCCAGTGCTAGCTaGAGGCTGCACTTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: AKKKDNLQFQSLSPKSYSLSSAS*RLHLCY
Trigger: ATAACACAAGTGCAGCCTCCAGCTAGCACTGGACAG...GCTATAGGATTTTGGACTTAATGACTGAAATTGCAAATTGTCCTTTTTCTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp GCCAAGAAAAAGGACAATTTGCAATTTCAGTCATTAAGTCCAAAATCCTATAGCGGGAGCCATCCAGAATaGCATCTGTTGTTTAGCTCG +
Preference number: 4 (lower is better)
Translates to: AKKKDNLQFQSLSPKSYSGSHPE*HLLFSS
Trigger: CGAGCTAAACAACAGATGCCATTCTGGATGGCTCCC...GCTATAGGATTTTGGACTTAATGACTGAAATTGCAAATTGTCCTTTTTCTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTTCTTTATGTCAGAACTaGGGCTATTCACCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: CFSCNQFWERETTVFHFCSLCQN*GYSPGK
Trigger: TTTTCCAGGTGAATAGCCCCAGTTCTGACATAAAGA...ACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR TCA 90 bp GCCAAGAAAAAGGACAATTTGCAATTTCAGTCATTAAGTCCAAAATCCTATAGCCTCCTCTTCATCAGATaGATCTGCAGCATAAGCCAC +
Preference number: 4 (lower is better)
Translates to: AKKKDNLQFQSLSPKSYSLLFIR*ICSISH
Trigger: GTGGCTTATGCTGCAGATTCATCTGATGAAGAGGAG...GCTATAGGATTTTGGACTTAATGACTGAAATTGCAAATTGTCCTTTTTCTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp TTAAATCAAATGCATGCATTATTGCTAAGAAGAGTCACTGAGGGTCAAAACTCTTGCTGGCTTCGATCCTaGACCTTCAATCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: LNQMHALLLRRVTEGQNSCWLRS*TFNLIL
Trigger: CAGAATGAGATTGAAGGTGCAGGATCGAAGCCAGCA...AGAGTTTTGACCCTCAGTGACTCTTCTTAGCAATAATGCATGCATTTGATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp TGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTTATACAAAGCCAGCCTaGAAAGTATTCAAATGTGCA +
Preference number: 4 (lower is better)
Translates to: CFSCNQFWERETTVFHFCYTKPA*KVFKCA
Trigger: TGCACATTTGAATACTTTGCAGGCTGGCTTTGTATA...ACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp GCCAAGAAAAAGGACAATTTGCAATTTCAGTCATTAAGTCCAAAATCCTATAGCCCCGCAGGAAGACTTTaGCACCTGTTTCAATCTGAA +
Preference number: 4 (lower is better)
Translates to: AKKKDNLQFQSLSPKSYSPAGRL*HLFQSE
Trigger: TTCAGATTGAAACAGGTGCCAAAGTCTTCCTGCGGG...GCTATAGGATTTTGGACTTAATGACTGAAATTGCAAATTGTCCTTTTTCTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp TGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTCAGATTCTATGCCACTaGAGAAATAAGGATTTTTGT +
Preference number: 4 (lower is better)
Translates to: CFSCNQFWERETTVFHFCQILCH*RNKDFC
Trigger: ACAAAAATCCTTATTTCTGCAGTGGCATAGAATCTG...ACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CCAACAGATTATAGAGGTTGGATTAAACACCTGAATGAACATCAGGTTAGAAAATTGGACTTGTTCCTGTaGCAGCTTTTACCACTCCAT +
Preference number: 4 (lower is better)
Translates to: PTDYRGWIKHLNEHQVRKLDLFL*QLLPLH
Trigger: ATGGAGTGGTAAAAGCTGCCACAGGAACAAGTCCAA...TTTTCTAACCTGATGTTCATTCAGGTGTTTAATCCAACCTCTATAATCTGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CCA 90 bp TTAAATCAAATGCATGCATTATTGCTAAGAAGAGTCACTGAGGGTCAAAACTCTTGCACCATTAAAAGTTaGACTTGTTCCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LNQMHALLLRRVTEGQNSCTIKS*TCSCGS
Trigger: GCTGCCACAGGAACAAGTCCAACTTTTAATGGTGCA...AGAGTTTTGACCCTCAGTGACTCTTCTTAGCAATAATGCATGCATTTGATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CCAACAGATTATAGAGGTTGGATTAAACACCTGAATGAACATCAGGTTAGAAAAGGATGGATAATATGGTaGTTGAGGAGGGACACTACT +
Preference number: 4 (lower is better)
Translates to: PTDYRGWIKHLNEHQVRKGWIIW*LRRDTT
Trigger: AGTAGTGTCCCTCCTCAACCACCATATTATCCATCC...TTTTCTAACCTGATGTTCATTCAGGTGTTTAATCCAACCTCTATAATCTGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CCA 90 bp TTAAATCAAATGCATGCATTATTGCTAAGAAGAGTCACTGAGGGTCAAAACTCTGGATGGATAATATGGTaGTTGAGGAGGGACACTACT +
Preference number: 4 (lower is better)
Translates to: LNQMHALLLRRVTEGQNSGWIIW*LRRDTT
Trigger: AGTAGTGTCCCTCCTCAACCACCATATTATCCATCC...AGAGTTTTGACCCTCAGTGACTCTTCTTAGCAATAATGCATGCATTTGATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CCAACAGATTATAGAGGTTGGATTAAACACCTGAATGAACATCAGGTTAGAAAATTTTATTCCAGTCACTaGAAAGGCTGGTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PTDYRGWIKHLNEHQVRKFYSSH*KGWWRH
Trigger: ATGCCTCCACCAGCCTTTCCAGTGACTGGAATAAAA...TTTTCTAACCTGATGTTCATTCAGGTGTTTAATCCAACCTCTATAATCTGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CCA 90 bp TTAAATCAAATGCATGCATTATTGCTAAGAAGAGTCACTGAGGGTCAAAACTCTTTTTATTCCAGTCACTaGAAAGGCTGGTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LNQMHALLLRRVTEGQNSFYSSH*KGWWRH
Trigger: ATGCCTCCACCAGCCTTTCCAGTGACTGGAATAAAA...AGAGTTTTGACCCTCAGTGACTCTTCTTAGCAATAATGCATGCATTTGATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp TTAAATCAAATGCATGCATTATTGCTAAGAAGAGTCACTGAGGGTCAAAACTCTATCTCAAACTATTCCTaGTTCAGCAGACTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LNQMHALLLRRVTEGQNSISNYS*FSRLAP
Trigger: AGGAGCTAGTCTGCTGAACCAGGAATAGTTTGAGAT...AGAGTTTTGACCCTCAGTGACTCTTCTTAGCAATAATGCATGCATTTGATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp GCCAAGAAAAAGGACAATTTGCAATTTCAGTCATTAAGTCCAAAATCCTATAGCTTTCAGCTTCCCTTTTaGCATGAGCATGGCATTAAT +
Preference number: 4 (lower is better)
Translates to: AKKKDNLQFQSLSPKSYSFQLPF*HEHGIN
Trigger: ATTAATGCCATGCTCATGGCAAAAGGGAAGCTGAAA...GCTATAGGATTTTGGACTTAATGACTGAAATTGCAAATTGTCCTTTTTCTTGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR GCA 90 bp TTAAATCAAATGCATGCATTATTGCTAAGAAGAGTCACTGAGGGTCAAAACTCTTATACAAAGCCAGCCTaGAAAGTATTCAAATGTGCA +
Preference number: 4 (lower is better)
Translates to: LNQMHALLLRRVTEGQNSYTKPA*KVFKCA
Trigger: TGCACATTTGAATACTTTGCAGGCTGGCTTTGTATA...AGAGTTTTGACCCTCAGTGACTCTTCTTAGCAATAATGCATGCATTTGATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CCA 90 bp CAACATATAGGAAACCAGAGGATAAGTTTATACAAAGCCAGCCTGCAAAGTATTCAAAAGTATTTTCACTaGCCAACAGATTATAGAGGT +
Preference number: 4 (lower is better)
Translates to: QHIGNQRISLYKASLQSIQKYFH*PTDYRG
Trigger: ACCTCTATAATCTGTTGGCCAGTGAAAATACTTTTG...AATACTTTGCAGGCTGGCTTTGTATAAACTTATCCTCTGGTTTCCTATATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS CCA 90 bp GCTGGTGACCTCCCCACCTGGGGCCGCTGGCGGGAGGAAGAGAAGTaGGGCTGGAGCTGGTTGGTCCCATTTGCTGCGGCGCCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: AGDLPTWGRWREEEK*GWSWLVPFAAAPAS
Trigger: GCTGGCGGGCGCCGCAGCAAATGGGACCAACCAGCTCCAGCCCCACTTCTCTTCCTCCCGCCAGCGGCCCCAGGTGGGGAGGTCACCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000466713.1
ENST00000482337.5
ENST00000491599.1
CDS TCA 90 bp GGTATCCAAGCAGTCCAGATTCCCGTTCATCTGGTAGCTCCTCTGTaGATCGTCTCTTCTGTGCCTGGGGCTGACTTGGGAGTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: GIQAVQIPVHLVAPL*IVSSVPGADLGVGA
Trigger: AGCCCCCACTCCCAAGTCAGCCCCAGGCACAGAAGAGACGATTCACAGAGGAGCTACCAGATGAACGGGAATCTGGACTGCTTGGATACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS GCA 90 bp ATGCCGGCAAGACTCCAGGTGCTAATGAAACAGCTGGTGGCACTATaGTTGGTACTCCGTAGGGAGGTTGAACTGGCTGCTGAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: MPARLQVLMKQLVAL*LVLRREVELAAEEG
Trigger: CCCCTCCTCAGCAGCCAGTTCAACCTCCCTACGGAGTACCAAGCATAGTGCCACCAGCTGTTTCATTAGCACCTGGAGTCTTGCCGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS-3UTR CAA 90 bp AATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATTAGCTGGTTGGTCCCATTaGCTGCGGCGCCCGCCAGCT +
Preference number: 5 (lower is better)
Translates to: NGYETNVPEGASFGSPQLAGWSH*LRRPPA
Trigger: AGCTGGCGGGCGCCGCAGCAAATGGGACCAACCAGC...TAATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp TTTATGTCAGAACTGGGGCTATTCACCTGGAAAAGGCTGACCAGGTCAAATGTGTGGGGCTGGAGCTGGTaGGTCCCATTTGCTGCGGCG +
Preference number: 5 (lower is better)
Translates to: FMSELGLFTWKRLTRSNVWGWSW*VPFAAA
Trigger: CGCCGCAGCAAATGGGACCAACCAGCTCCAGCCCCA...CACATTTGACCTGGTCAGCCTTTTCCAGGTGAATAGCCCCAGTTCTGACATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS GCA 90 bp ATGCCGGCAAGACTCCAGGTGCTAATGAAACAGCTGGTGGCACTATaGTTGGTACTCCGTAGGGAGGTTGAACTGGCTGCTGGTAAAGGT +
Preference number: 5 (lower is better)
Translates to: MPARLQVLMKQLVAL*LVLRREVELAAGKG
Trigger: ACCTTTACCAGCAGCCAGTTCAACCTCCCTACGGAGTACCAAGCATAGTGCCACCAGCTGTTTCATTAGCACCTGGAGTCTTGCCGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368319.3
ENST00000482337.5
ENST00000483237.1
CDS CCA 90 bp AGTCTTAGCCACTCCCCTGTTCCCCCAGCTATATCACACTCACCATaGCTCCCTGTTAAGGTCCCAGACCCATTCCTTTCATCGGACTCT +
Preference number: 5 (lower is better)
Translates to: SLSHSPVPPAISHSP*LPVKVPDPFLSSDS
Trigger: AGAGTCCGATGAAAGGAATGGGTCTGGGACCTTAACAGGGAGCCATGGTGAGTGTGATATAGCTGGGGGAACAGGGGAGTGGCTAAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000465953.1
ENST00000466520.1
CDS-3UTR CAA 90 bp TGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTGCTGGTTGGTCCCATTaGCTGCGGCGCCCGCCAGCT +
Preference number: 5 (lower is better)
Translates to: CFSCNQFWERETTVFHFCAGWSH*LRRPPA
Trigger: AGCTGGCGGGCGCCGCAGCAAATGGGACCAACCAGC...ACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGTGGGGCTGGAGCTGGTaGGTCCCATTTGCTGCGGCG +
Preference number: 5 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALWGWSW*VPFAAA
Trigger: CGCCGCAGCAAATGGGACCAACCAGCTCCAGCCCCA...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS TCA 90 bp CATAGGTTCAAAAGCTTCTCGGCCAGATGCTGGCTCAATGCAGCCTaGACCTTTGCCCCGCAGGAAGACTTTGGCACCTGTTTCAATCTG +
Preference number: 5 (lower is better)
Translates to: HRFKSFSARCWLNAA*TFAPQEDFGTCFNL
Trigger: CAGATTGAAACAGGTGCCAAAGTCTTCCTGCGGGGCAAAGGTTCAGGCTGCATTGAGCCAGCATCTGGCCGAGAAGCTTTTGAACCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
ENST00000482337.5
CDS CCA 90 bp CCCAGACCCATTCCTTTCATCGGACTCTGTTTTTATTCCAGTCACTaGAAAGGCTGGTGGAGGCATCAACTGCCTGTCCCTCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: PRPIPFIGLCFYSSH*KGWWRHQLPVPLSL
Trigger: GAGAGAGAGAGGGACAGGCAGTTGATGCCTCCACCAGCCTTTCCAGTGACTGGAATAAAAACAGAGTCCGATGAAAGGAATGGGTCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000465953.1
ENST00000466520.1
ENST00000478002.5
CDS-3UTR CAA 90 bp AATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATTATACTCCGTAGGGAGGTaGAACTGGCTGCTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: NGYETNVPEGASFGSPQLYSVGR*NWLLRR
Trigger: CCTCCTCAGCAGCCAGTTCAACCTCCCTACGGAGTA...TAATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp GTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATCTTTGCCTGAGGAACTaGCTGGCTTCGATCCTGCAC +
Preference number: 5 (lower is better)
Translates to: VMAMRPMCLKVPALDHPNLCLRN*LASILH
Trigger: GTGCAGGATCGAAGCCAGCAAGTTCCTCAGGCAAAG...ATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS CCA 90 bp GGGAGGCTTCTGGCTAACAGCTGGAGACAACTGAGCGATGGGTGCTaGCTGGTGATAGACAGTTACTGTTGCACCATTAAAAGTTGGACT +
Preference number: 5 (lower is better)
Translates to: GRLLANSWRQLSDGC*LVIDSYCCTIKSWT
Trigger: AGTCCAACTTTTAATGGTGCAACAGTAACTGTCTATCACCAGCCAGCACCCATCGCTCAGTTGTCTCCAGCTGTTAGCCAGAAGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000466713.1
ENST00000482337.5
CDS-3UTR CAA 90 bp GTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATAGCATGGCATTAATCTaGGCAGCCACAGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: VMAMRPMCLKVPALDHPNSMALI*AATAAA
Trigger: TGCTGCTGCTGTGGCTGCCAAGATTAATGCCATGCT...ATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp CAGTCAGATCTCTCTGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTTATCGGGTATTGTGTaGGCACAGGTGGGACTCCAG +
Preference number: 5 (lower is better)
Translates to: QSDLSVLAATSSGRERPLLSGIV*AQVGLQ
Trigger: CTGGAGTCCCACCTGTGCCAACACAATACCCGATAA...CAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACAGAGAGATCTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp GGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATTACTCCGTAGGGAGGTaGAACTGGCTGCTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GQMCMGTTLLGCFVGQAHYSVGR*NWLLRR
Trigger: CCTCCTCAGCAGCCAGTTCAACCTCCCTACGGAGTA...ATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS GCA 90 bp CTGAAGCTTCTCAGAAGCATTCTGAGTTGGTTTCAGCTTCCCTTTTaGCATGAGCATGGCATTAATCTTGGCAGCCACAGCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LKLLRSILSWFQLPF*HEHGINLGSHSSSS
Trigger: GCTGCTGCTGCTGTGGCTGCCAAGATTAATGCCATGCTCATGGCAAAAGGGAAGCTGAAACCAACTCAGAATGCTTCTGAGAAGCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000466713.1
ENST00000482337.5
CDS CCA 90 bp CTGAGGAGGGGGAACAACAGGGTAACCAGACTGATAGCCATTGGATaGATAATATGGTGGTTGAGGAGGGACACTACTTATAGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: LRRGNNRVTRLIAIG*IIWWLRRDTTYSRG
Trigger: CCCTCTGCTATAAGTAGTGTCCCTCCTCAACCACCATATTATCCATCCAATGGCTATCAGTCTGGTTACCCTGTTGTTCCCCCTCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS-3UTR CAA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATCGGCTGATCTCGTCTaGAGTCTGTCCTCGAGTCAG +
Preference number: 5 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTSADLV*SLSSSQ
Trigger: CTGACTCGAGGACAGACTCAAGACGAGATCAGCCGA...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp TATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATTTCACCAACTGCTGGTGGCACTATGCTaGGTACTCCGTAGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: YGNDPVRMLCWTSTFHQLLVALC*VLRREV
Trigger: AACCTCCCTACGGAGTACCAAGCATAGTGCCACCAG...CAGTTGGTGAAATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp TTTATGTCAGAACTGGGGCTATTCACCTGGAAAAGGCTGACCAGGTCAAATGTGCTTTGCCTGAGGAACTaGCTGGCTTCGATCCTGCAC +
Preference number: 5 (lower is better)
Translates to: FMSELGLFTWKRLTRSNVLCLRN*LASILH
Trigger: GTGCAGGATCGAAGCCAGCAAGTTCCTCAGGCAAAG...CACATTTGACCTGGTCAGCCTTTTCCAGGTGAATAGCCCCAGTTCTGACATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp CTGGAATTACAGGCGCCCACCACCATGCCCGCTAGTTTTTGTATTTTTAGTAGATCCCTCTCTCTCTCTTaGCCTGAGGAACTTGCTGGC +
Preference number: 5 (lower is better)
Translates to: LELQAPTTMPASFCIFSRSLSLS*PEELAG
Trigger: GCCAGCAAGTTCCTCAGGCAAAGAGAGAGAGAGGGA...TCTACTAAAAATACAAAAACTAGCGGGCATGGTGGTGGGCGCCTGTAATTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CAA 90 bp TTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTGATGGGCAGTGGTCTGATCTaGGCTCACTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: LAATSSGRERPLYFISVMGSGLI*AHCNLC
Trigger: GCAGAGGTTGCAGTGAGCCAAGATCAGACCACTGCC...CATCACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CAA 90 bp GGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATTTATCGGGTATTGTGTaGGCACAGGTGGGACTCCAG +
Preference number: 5 (lower is better)
Translates to: GQMCMGTTLLGCFVGQAHLSGIV*AQVGLQ
Trigger: CTGGAGTCCCACCTGTGCCAACACAATACCCGATAA...ATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS GCA 90 bp AGACAACTGAGCGATGGGTGCTGGCTGGTGATAGACAGTTACTGTTaGACCATTAAAAGTTGGACTTGTTCCTGTGGCAGCTTTTACCAC +
Preference number: 5 (lower is better)
Translates to: RQLSDGCWLVIDSYC*TIKSWTCSCGSFYH
Trigger: GTGGTAAAAGCTGCCACAGGAACAAGTCCAACTTTTAATGGTGCAACAGTAACTGTCTATCACCAGCCAGCACCCATCGCTCAGTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000466713.1
ENST00000482337.5
CDS GCA 90 bp AAATACCTTCTCAGAAGCATTCTGAGTTGGTTTCAGCTTCCCTTTTaGCATGAGCATGGCATTAATCTTGGCAGCCACAGCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: KYLLRSILSWFQLPF*HEHGINLGSHSSSS
Trigger: GCTGCTGCTGCTGTGGCTGCCAAGATTAATGCCATGCTCATGGCAAAAGGGAAGCTGAAACCAACTCAGAATGCTTCTGAGAAGGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491599.1
CDS-3UTR CAA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGTGTTATCGGGTATaGTGTTGGCACAGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPALCYRV*CWHRWD
Trigger: GTCCCACCTGTGCCAACACAATACCCGATAACACAA...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp GTTAATTTTAAGTGGTTAGTTGGACACCATTTTGAGGTCACAGGGTCAATGGTCATGCAGCCTGAACCTTaGCCCCGCAGGAAGACTTTG +
Preference number: 5 (lower is better)
Translates to: VNFKWLVGHHFEVTGSMVMQPEP*PRRKTL
Trigger: CAAAGTCTTCCTGCGGGGCAAAGGTTCAGGCTGCAT...GACCATTGACCCTGTGACCTCAAAATGGTGTCCAACTAACCACTTAAAATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CAA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGTTGTGTTATCGGGTATaGTGTTGGCACAGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALLCYRV*CWHRWD
Trigger: GTCCCACCTGTGCCAACACAATACCCGATAACACAA...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS CCA 90 bp GGGTGCTGGCTGGTGATAGACAGTTACTGTTGCACCATTAAAAGTTaGACTTGTTCCTGTGGCAGCTTTTACCACTCCATTGGTGATAAT +
Preference number: 5 (lower is better)
Translates to: GCWLVIDSYCCTIKS*TCSCGSFYHSIGDN
Trigger: ATTATCACCAATGGAGTGGTAAAAGCTGCCACAGGAACAAGTCCAACTTTTAATGGTGCAACAGTAACTGTCTATCACCAGCCAGCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000466713.1
ENST00000482337.5
CDS CCA 90 bp AACAACAGGGTAACCAGACTGATAGCCATTGGATGGATAATATGGTaGTTGAGGAGGGACACTACTTATAGCAGAGGGTTGTGTATAGCC +
Preference number: 5 (lower is better)
Translates to: NNRVTRLIAIGWIIW*LRRDTTYSRGLCIA
Trigger: GGCTATACACAACCCTCTGCTATAAGTAGTGTCCCTCCTCAACCACCATATTATCCATCCAATGGCTATCAGTCTGGTTACCCTGTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS CCA 90 bp GGGAACAACAGGGTAACCAGACTGATAGCCATTGGATGGATAATATaGTGGTTGAGGAGGGACACTACTTATAGCAGAGGGTTGTGTATA +
Preference number: 5 (lower is better)
Translates to: GNNRVTRLIAIGWII*WLRRDTTYSRGLCI
Trigger: TATACACAACCCTCTGCTATAAGTAGTGTCCCTCCTCAACCACCATATTATCCATCCAATGGCTATCAGTCTGGTTACCCTGTTGTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS-3UTR CAA 90 bp CTGGAATTACAGGCGCCCACCACCATGCCCGCTAGTTTTTGTATTTTTAGTAGACAGAAGCATTCTGAGTaGGTTTCAGCTTCCCTTTTG +
Preference number: 5 (lower is better)
Translates to: LELQAPTTMPASFCIFSRQKHSE*VSASLL
Trigger: CAAAAGGGAAGCTGAAACCAACTCAGAATGCTTCTG...TCTACTAAAAATACAAAAACTAGCGGGCATGGTGGTGGGCGCCTGTAATTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CAA 90 bp CTGGAATTACAGGCGCCCACCACCATGCCCGCTAGTTTTTGTATTTTTAGTAGAACCACCAGGTCATCCTaGCTTTTATTGCTAGTTAGG +
Preference number: 5 (lower is better)
Translates to: LELQAPTTMPASFCIFSRTTRSS*LLLLVR
Trigger: CCTAACTAGCAATAAAAGCAAGGATGACCTGGTGGT...TCTACTAAAAATACAAAAACTAGCGGGCATGGTGGTGGGCGCCTGTAATTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CAA 90 bp GTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGATCACCCCAATTTGGTGATAATTTCTTaGATCCGGTTTACAGCTCTG +
Preference number: 5 (lower is better)
Translates to: VMAMRPMCLKVPALDHPNLVIIS*IRFTAL
Trigger: CAGAGCTGTAAACCGGATCAAAGAAATTATCACCAA...ATTGGGGTGATCCAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp CAGTCAGATCTCTCTGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGCCTGTGGAAAACTACTaGCATTTTTATGACCTCCAT +
Preference number: 5 (lower is better)
Translates to: QSDLSVLAATSSGRERPLPVENY*HFYDLH
Trigger: ATGGAGGTCATAAAAATGCAAGTAGTTTTCCACAGG...CAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACAGAGAGATCTGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp TATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATTTCACCAACTGACAGGCCCCAGAGTCTaGTTAAATCAAATGCATGCA +
Preference number: 5 (lower is better)
Translates to: YGNDPVRMLCWTSTFHQLTGPRV*LNQMHA
Trigger: TGCATGCATTTGATTTAACAAGACTCTGGGGCCTGT...CAGTTGGTGAAATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATCATCCTTGCTTTTATaGCTAGTTAGGCCTTTGCCA +
Preference number: 5 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTSSLLL*LVRPLP
Trigger: TGGCAAAGGCCTAACTAGCAATAAAAGCAAGGATGA...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGACCACCAGGTCATCCTaGCTTTTATTGCTAGTTAGG +
Preference number: 5 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALTTRSS*LLLLVR
Trigger: CCTAACTAGCAATAAAAGCAAGGATGACCTGGTGGT...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp CAACATATAGGAAACCAGAGGATAAGTTTATACAAAGCCAGCCTGCAAAGTATTATGCAGCCTGAACCTTaGCCCCGCAGGAAGACTTTG +
Preference number: 5 (lower is better)
Translates to: QHIGNQRISLYKASLQSIMQPEP*PRRKTL
Trigger: CAAAGTCTTCCTGCGGGGCAAAGGTTCAGGCTGCAT...AATACTTTGCAGGCTGGCTTTGTATAAACTTATCCTCTGGTTTCCTATATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp AGGGCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTCTCTCGGCACACGTTaGTTGGAAATAAAAGGTTGT +
Preference number: 5 (lower is better)
Translates to: RAIKTVMAMRPMCLKVPASLGTR*LEIKGC
Trigger: ACAACCTTTTATTTCCAACAAACGTGTGCCGAGAGA...AGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS TCA 90 bp TTTCCCCAGTTTTTCCTAAATTCAGTAATATGTTGTTGCATATCCTaGCATCCTACCTGTCCAGTGCTAGCTGGAGGCTGCACTTGTGTT +
Preference number: 5 (lower is better)
Translates to: FPQFFLNSVICCCIS*HPTCPVLAGGCTCV
Trigger: AACACAAGTGCAGCCTCCAGCTAGCACTGGACAGGTAGGATGTCAGGATATGCAACAACATATTACTGAATTTAGGAAAAACTGGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483237.1
CDS-3UTR CAA 90 bp GCCAAGAAAAAGGACAATTTGCAATTTCAGTCATTAAGTCCAAAATCCTATAGCTCGGCTGATCTCGTCTaGAGTCTGTCCTCGAGTCAG +
Preference number: 5 (lower is better)
Translates to: AKKKDNLQFQSLSPKSYSSADLV*SLSSSQ
Trigger: CTGACTCGAGGACAGACTCAAGACGAGATCAGCCGA...GCTATAGGATTTTGGACTTAATGACTGAAATTGCAAATTGTCCTTTTTCTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp TATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATTTCACCAACTGTTGGTGATAATTTCTTaGATCCGGTTTACAGCTCTG +
Preference number: 5 (lower is better)
Translates to: YGNDPVRMLCWTSTFHQLLVIIS*IRFTAL
Trigger: CAGAGCTGTAAACCGGATCAAAGAAATTATCACCAA...CAGTTGGTGAAATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp TTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTGATGTGGATAATATGGTGGTaGAGGAGGGACACTACTTAT +
Preference number: 5 (lower is better)
Translates to: LAATSSGRERPLYFISVMWIIWW*RRDTTY
Trigger: ATAAGTAGTGTCCCTCCTCAACCACCATATTATCCA...CATCACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp GCCAAGAAAAAGGACAATTTGCAATTTCAGTCATTAAGTCCAAAATCCTATAGCTCCCTCTCTCTCTCTTaGCCTGAGGAACTTGCTGGC +
Preference number: 5 (lower is better)
Translates to: AKKKDNLQFQSLSPKSYSSLSLS*PEELAG
Trigger: GCCAGCAAGTTCCTCAGGCAAAGAGAGAGAGAGGGA...GCTATAGGATTTTGGACTTAATGACTGAAATTGCAAATTGTCCTTTTTCTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGGTCACCCAAAAACGTaGAAGATCACACGAAAAACA +
Preference number: 5 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALGHPKT*KITRKT
Trigger: TGTTTTTCGTGTGATCTTCAACGTTTTTGGGTGACC...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CAA 90 bp AGGTCAAATGTGTATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACACAAATGCATGCATTATaGCTAAGAAGAGTCACTGAG +
Preference number: 5 (lower is better)
Translates to: RSNVYGNDPVRMLCWTSTQMHAL*LRRVTE
Trigger: CTCAGTGACTCTTCTTAGCAATAATGCATGCATTTG...TGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATACACATTTGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp TATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATTTCACCAACTGGCTTTTACCACTCCATaGGTGATAATTTCTTTGATC +
Preference number: 5 (lower is better)
Translates to: YGNDPVRMLCWTSTFHQLAFTTP*VIISLI
Trigger: GATCAAAGAAATTATCACCAATGGAGTGGTAAAAGC...CAGTTGGTGAAATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp TATGGGAACGACCCTGTTAGGATGCTTTGTTGGACAAGCACATTTCACCAACTGTTCAGCATGAACTGTTaGCAAAAGATTCTCACAAAG +
Preference number: 5 (lower is better)
Translates to: YGNDPVRMLCWTSTFHQLFSMNC*QKILTK
Trigger: CTTTGTGAGAATCTTTTGCAAACAGTTCATGCTGAA...CAGTTGGTGAAATGTGCTTGTCCAACAAAGCATCCTAACAGGGTCGTTCCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp CAACATATAGGAAACCAGAGGATAAGTTTATACAAAGCCAGCCTGCAAAGTATTAGCTGGAGGCTGCACTaGTGTTATCGGGTATTGTGT +
Preference number: 5 (lower is better)
Translates to: QHIGNQRISLYKASLQSISWRLH*CYRVLC
Trigger: ACACAATACCCGATAACACAAGTGCAGCCTCCAGCT...AATACTTTGCAGGCTGGCTTTGTATAAACTTATCCTCTGGTTTCCTATATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp TGTTTTAGCTGCAACCAGTTCTGGGAGAGAGAGACCACTGTATTTCATTTCTGTTGGATAATATGGTGGTaGAGGAGGGACACTACTTAT +
Preference number: 5 (lower is better)
Translates to: CFSCNQFWERETTVFHFCWIIWW*RRDTTY
Trigger: ATAAGTAGTGTCCCTCCTCAACCACCATATTATCCA...ACAGAAATGAAATACAGTGGTCTCTCTCTCCCAGAACTGGTTGCAGCTAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGCAAATGCATGCATTATaGCTAAGAAGAGTCACTGAG +
Preference number: 5 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALQMHAL*LRRVTE
Trigger: CTCAGTGACTCTTCTTAGCAATAATGCATGCATTTG...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp GCAATAAAAACAGTAATGGCTATGAGACCAATGTGCCTGAAGGTGCCAGCTTTGGCTTTTACCACTCCATaGGTGATAATTTCTTTGATC +
Preference number: 5 (lower is better)
Translates to: AIKTVMAMRPMCLKVPALAFTTP*VIISLI
Trigger: GATCAAAGAAATTATCACCAATGGAGTGGTAAAAGC...CAAAGCTGGCACCTTCAGGCACATTGGTCTCATAGCCATTACTGTTTTTATTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp CCAACAGATTATAGAGGTTGGATTAAACACCTGAATGAACATCAGGTTAGAAAAAGCTGGAGGCTGCACTaGTGTTATCGGGTATTGTGT +
Preference number: 5 (lower is better)
Translates to: PTDYRGWIKHLNEHQVRKSWRLH*CYRVLC
Trigger: ACACAATACCCGATAACACAAGTGCAGCCTCCAGCT...TTTTCTAACCTGATGTTCATTCAGGTGTTTAATCCAACCTCTATAATCTGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS TCA 90 bp ACTACTGCACTACACAATGCAGGTATATATTACCAACGAGAAAGCTaGGTTTCATTATGCCAAAGCCATGTAACCAGTAACTGTGGATTC +
Preference number: 5 (lower is better)
Translates to: TTALHNAGIYYQRES*VSLCQSHVTSNCGF
Trigger: GAATCCACAGTTACTGGTTACATGGCTTTGGCATAATGAAACTCAGCTTTCTCGTTGGTAATATATACCTGCATTGTGTAGTGCAGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491599.1
CDS-3UTR CAA 90 bp CAACATATAGGAAACCAGAGGATAAGTTTATACAAAGCCAGCCTGCAAAGTATTCAGAAGCATTCTGAGTaGGTTTCAGCTTCCCTTTTG +
Preference number: 5 (lower is better)
Translates to: QHIGNQRISLYKASLQSIQKHSE*VSASLL
Trigger: CAAAAGGGAAGCTGAAACCAACTCAGAATGCTTCTG...AATACTTTGCAGGCTGGCTTTGTATAAACTTATCCTCTGGTTTCCTATATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp TTAAATCAAATGCATGCATTATTGCTAAGAAGAGTCACTGAGGGTCAAAACTCTTCATCCTTGCTTTTATaGCTAGTTAGGCCTTTGCCA +
Preference number: 5 (lower is better)
Translates to: LNQMHALLLRRVTEGQNSSSLLL*LVRPLP
Trigger: TGGCAAAGGCCTAACTAGCAATAAAAGCAAGGATGA...AGAGTTTTGACCCTCAGTGACTCTTCTTAGCAATAATGCATGCATTTGATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp CAACATATAGGAAACCAGAGGATAAGTTTATACAAAGCCAGCCTGCAAAGTATTTTTTCTAGATACACGTaGGTTGGAAACAAAAGGTTG +
Preference number: 5 (lower is better)
Translates to: QHIGNQRISLYKASLQSIFSRYT*VGNKRL
Trigger: CAACCTTTTGTTTCCAACCAACGTGTATCTAGAAAA...AATACTTTGCAGGCTGGCTTTGTATAAACTTATCCTCTGGTTTCCTATATGTTG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368320.7
CDS-3UTR CAA 90 bp TTAAATCAAATGCATGCATTATTGCTAAGAAGAGTCACTGAGGGTCAAAACTCTCCTGTGGAAAACTACTaGCATTTTTATGACCTCCAT +
Preference number: 5 (lower is better)
Translates to: LNQMHALLLRRVTEGQNSPVENY*HFYDLH
Trigger: ATGGAGGTCATAAAAATGCAAGTAGTTTTCCACAGG...AGAGTTTTGACCCTCAGTGACTCTTCTTAGCAATAATGCATGCATTTGATTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS-3UTR CAA 90 bp GCCAAGAAAAAGGACAATTTGCAATTTCAGTCATTAAGTCCAAAATCCTATAGCTTCAGCATGAACTGTTaGCAAAAGATTCTCACAAAG +
Preference number: 5 (lower is better)
Translates to: AKKKDNLQFQSLSPKSYSFSMNC*QKILTK
Trigger: CTTTGTGAGAATCTTTTGCAAACAGTTCATGCTGAA...GCTATAGGATTTTGGACTTAATGACTGAAATTGCAAATTGTCCTTTTTCTTGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368320.7
ENST00000368321.8
CDS CCA 72 bp ACCTGGGGCCGCTGGCGGGAGGAAGAGAAGTGGGGCTaGAGCTGGTTGGTCCCATTTGCTGCGGCGCCCGCC +
Preference number: 6 (lower is better)
Translates to: TWGRWREEEKWG*SWLVPFAAAPA
Trigger: GGCGGGCGCCGCAGCAAATGGGACCAACCAGCTCCAGCCCCACTTCTCTTCCTCCCGCCAGCGGCCCCAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000466713.1
ENST00000482337.5
ENST00000491599.1
CDS CAA 90 bp CCGGCAAGACTCCAGGTGCTAATGAAACAGCTGGTGGCACTATGCTaGGTACTCCGTAGGGAGGTTGAACTGGCTGCTGAGGAGGGGGAA +
Preference number: 6 (lower is better)
Translates to: PARLQVLMKQLVALC*VLRREVELAAEEGE
Trigger: TTCCCCCTCCTCAGCAGCCAGTTCAACCTCCCTACGGAGTACCAAGCATAGTGCCACCAGCTGTTTCATTAGCACCTGGAGTCTTGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS CAA 90 bp AGGACCACCCATCGGACTCTGTCCAGTGCTAGCTGGAGGCTGCACTaGTGTTATCGGGTATTGTGTTGGCACAGGTGGGACTCCAGTAGG +
Preference number: 6 (lower is better)
Translates to: RTTHRTLSSASWRLH*CYRVLCWHRWDSSR
Trigger: CCTACTGGAGTCCCACCTGTGCCAACACAATACCCGATAACACAAGTGCAGCCTCCAGCTAGCACTGGACAGAGTCCGATGGGTGGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS TCA 72 bp AAAAGCTTCTCGGCCAGATGCTGGCTCAATGCAGCCTaGACCTTTGCCCCGCAGGAAGACTTTGGCACCTGT +
Preference number: 6 (lower is better)
Translates to: KSFSARCWLNAA*TFAPQEDFGTC
Trigger: ACAGGTGCCAAAGTCTTCCTGCGGGGCAAAGGTTCAGGCTGCATTGAGCCAGCATCTGGCCGAGAAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
ENST00000482337.5
CDS TCA 72 bp GCAGTCCAGATTCCCGTTCATCTGGTAGCTCCTCTGTaGATCGTCTCTTCTGTGCCTGGGGCTGACTTGGGA +
Preference number: 6 (lower is better)
Translates to: AVQIPVHLVAPL*IVSSVPGADLG
Trigger: TCCCAAGTCAGCCCCAGGCACAGAAGAGACGATTCACAGAGGAGCTACCAGATGAACGGGAATCTGGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS GCA 72 bp CTCGGCCAGATGCTGGCTCAATGCAGCCTGAACCTTTaGCCCGCAGGAAGACTTTGGCACCTGTTTCAATCT +
Preference number: 6 (lower is better)
Translates to: LGQMLAQCSLNL*PAGRLWHLFQS
Trigger: AGATTGAAACAGGTGCCAAAGTCTTCCTGCGGGGCAAAGGTTCAGGCTGCATTGAGCCAGCATCTGGCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
ENST00000482337.5
CDS GCA 72 bp CCACCCATCGGACTCTGTCCAGTGCTAGCTGGAGGCTaGACTTGTGTTATCGGGTATTGTGTTGGCACAGGT +
Preference number: 6 (lower is better)
Translates to: PPIGLCPVLAGG*TCVIGYCVGTG
Trigger: ACCTGTGCCAACACAATACCCGATAACACAAGTGCAGCCTCCAGCTAGCACTGGACAGAGTCCGATGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS CCA 72 bp TGGCACTATGCTTGGTACTCCGTAGGGAGGTTGAACTaGCTGCTGAGGAGGGGGAACAACAGGGTAACCAGA +
Preference number: 6 (lower is better)
Translates to: WHYAWYSVGRLN*LLRRGNNRVTR
Trigger: TCTGGTTACCCTGTTGTTCCCCCTCCTCAGCAGCCAGTTCAACCTCCCTACGGAGTACCAAGCATAGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS CAA 72 bp TCTCGGCCAGATGCTGGCTCAATGCAGCCTGAACCTTaGCCCCGCAGGAAGACTTTGGCACCTGTTTCAATC +
Preference number: 6 (lower is better)
Translates to: SRPDAGSMQPEP*PRRKTLAPVSI
Trigger: GATTGAAACAGGTGCCAAAGTCTTCCTGCGGGGCAAAGGTTCAGGCTGCATTGAGCCAGCATCTGGCCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
ENST00000482337.5
CDS CAA 72 bp CATCGGACTCTGTCCAGTGCTAGCTGGAGGCTGCACTaGTGTTATCGGGTATTGTGTTGGCACAGGTGGGAC +
Preference number: 6 (lower is better)
Translates to: HRTLSSASWRLH*CYRVLCWHRWD
Trigger: GTCCCACCTGTGCCAACACAATACCCGATAACACAAGTGCAGCCTCCAGCTAGCACTGGACAGAGTCCGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS CCA 72 bp CACTCCCCTGTTCCCCCAGCTATATCACACTCACCATaGCTCCCTGTTAAGGTCCCAGACCCATTCCTTTCA +
Preference number: 6 (lower is better)
Translates to: HSPVPPAISHSP*LPVKVPDPFLS
Trigger: TGAAAGGAATGGGTCTGGGACCTTAACAGGGAGCCATGGTGAGTGTGATATAGCTGGGGGAACAGGGGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000465953.1
ENST00000466520.1
CDS CAA 72 bp CTCCAGGTGCTAATGAAACAGCTGGTGGCACTATGCTaGGTACTCCGTAGGGAGGTTGAACTGGCTGCTGGT +
Preference number: 6 (lower is better)
Translates to: LQVLMKQLVALC*VLRREVELAAG
Trigger: ACCAGCAGCCAGTTCAACCTCCCTACGGAGTACCAAGCATAGTGCCACCAGCTGTTTCATTAGCACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368319.3
ENST00000482337.5
ENST00000483237.1
CDS CAA 72 bp CTCCAGGTGCTAATGAAACAGCTGGTGGCACTATGCTaGGTACTCCGTAGGGAGGTTGAACTGGCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: LQVLMKQLVALC*VLRREVELAAE
Trigger: CTCAGCAGCCAGTTCAACCTCCCTACGGAGTACCAAGCATAGTGCCACCAGCTGTTTCATTAGCACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS CAA 90 bp CCGGCAAGACTCCAGGTGCTAATGAAACAGCTGGTGGCACTATGCTaGGTACTCCGTAGGGAGGTTGAACTGGCTGCTGGTAAAGGTACA +
Preference number: 6 (lower is better)
Translates to: PARLQVLMKQLVALC*VLRREVELAAGKGT
Trigger: TGTACCTTTACCAGCAGCCAGTTCAACCTCCCTACGGAGTACCAAGCATAGTGCCACCAGCTGTTTCATTAGCACCTGGAGTCTTGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368319.3
ENST00000482337.5
ENST00000483237.1
CDS TCA 72 bp GGCTTTTTCCTCAGTTGTCATGAACCTCCCTCGAGTTaGTACTGCAGCCCCACTAAGTCGGCTGATCTCGTC +
Preference number: 6 (lower is better)
Translates to: GFFLSCHEPPSS*YCSPTKSADLV
Trigger: GACGAGATCAGCCGACTTAGTGGGGCTGCAGTATCAACTCGAGGGAGGTTCATGACAACTGAGGAAAAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000466713.1
ENST00000482337.5
CDS GCA 72 bp AGACTCCAGGTGCTAATGAAACAGCTGGTGGCACTATaGTTGGTACTCCGTAGGGAGGTTGAACTGGCTGCT +
Preference number: 6 (lower is better)
Translates to: RLQVLMKQLVAL*LVLRREVELAA
Trigger: AGCAGCCAGTTCAACCTCCCTACGGAGTACCAAGCATAGTGCCACCAGCTGTTTCATTAGCACCTGGAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
ENST00000482337.5
ENST00000483237.1
CDS CCA 72 bp AAAAGGACCACCCATCGGACTCTGTCCAGTGCTAGCTaGAGGCTGCACTTGTGTTATCGGGTATTGTGTTGG +
Preference number: 6 (lower is better)
Translates to: KRTTHRTLSSAS*RLHLCYRVLCW
Trigger: CCAACACAATACCCGATAACACAAGTGCAGCCTCCAGCTAGCACTGGACAGAGTCCGATGGGTGGTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS CAA 72 bp TTCAGCTTCCCTTTTGCCATGAGCATGGCATTAATCTaGGCAGCCACAGCAGCAGCAGCATCCAAGGCTCCT +
Preference number: 6 (lower is better)
Translates to: FSFPFAMSMALI*AATAAAASKAP
Trigger: AGGAGCCTTGGATGCTGCTGCTGCTGTGGCTGCCAAGATTAATGCCATGCTCATGGCAAAAGGGAAGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000466713.1
ENST00000482337.5
ENST00000491599.1
CDS CAA 90 bp GAGGCATCAACTGCCTGTCCCTCTCTCTCTCTTTGCCTGAGGAACTaGCTGGCTTCGATCCTGCACCTTCAATCTCATTCTGACTGGAGA +
Preference number: 6 (lower is better)
Translates to: EASTACPSLSLCLRN*LASILHLQSHSDWR
Trigger: TCTCCAGTCAGAATGAGATTGAAGGTGCAGGATCGAAGCCAGCAAGTTCCTCAGGCAAAGAGAGAGAGAGGGACAGGCAGTTGATGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000465953.1
ENST00000466520.1
ENST00000478002.5
CDS TCA 72 bp CTTGCTGGCTTCGATCCTGCACCTTCAATCTCATTCTaGCTGGAGAAGCCTGTACCTGGTATCCAAGCAGTC +
Preference number: 6 (lower is better)
Translates to: LAGFDPAPSISF*LEKPVPGIQAV
Trigger: GACTGCTTGGATACCAGGTACAGGCTTCTCCAGTCAGAATGAGATTGAAGGTGCAGGATCGAAGCCAGCAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466520.1
ENST00000478002.5
CDS GCA 72 bp CTTCTGGCTAACAGCTGGAGACAACTGAGCGATGGGTaGTGGCTGGTGATAGACAGTTACTGTTGCACCATT +
Preference number: 6 (lower is better)
Translates to: LLANSWRQLSDG*WLVIDSYCCTI
Trigger: AATGGTGCAACAGTAACTGTCTATCACCAGCCAGCACCCATCGCTCAGTTGTCTCCAGCTGTTAGCCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000466713.1
ENST00000482337.5
CDS CCA 72 bp CTGGCTTCGATCCTGCACCTTCAATCTCATTCTGACTaGAGAAGCCTGTACCTGGTATCCAAGCAGTCCAGA +
Preference number: 6 (lower is better)
Translates to: LASILHLQSHSD*RSLYLVSKQSR
Trigger: TCTGGACTGCTTGGATACCAGGTACAGGCTTCTCCAGTCAGAATGAGATTGAAGGTGCAGGATCGAAGCCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466520.1
ENST00000478002.5
CDS CAA 72 bp ACTGCCTGTCCCTCTCTCTCTCTTTGCCTGAGGAACTaGCTGGCTTCGATCCTGCACCTTCAATCTCATTCT +
Preference number: 6 (lower is better)
Translates to: TACPSLSLCLRN*LASILHLQSHS
Trigger: AGAATGAGATTGAAGGTGCAGGATCGAAGCCAGCAAGTTCCTCAGGCAAAGAGAGAGAGAGGGACAGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000465953.1
ENST00000466520.1
ENST00000478002.5
CDS GCA 72 bp AGCGATGGGTGCTGGCTGGTGATAGACAGTTACTGTTaGACCATTAAAAGTTGGACTTGTTCCTGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: SDGCWLVIDSYC*TIKSWTCSCGS
Trigger: GCTGCCACAGGAACAAGTCCAACTTTTAATGGTGCAACAGTAACTGTCTATCACCAGCCAGCACCCATCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000466713.1
ENST00000482337.5
CDS CCA 72 bp CTGGCTAACAGCTGGAGACAACTGAGCGATGGGTGCTaGCTGGTGATAGACAGTTACTGTTGCACCATTAAA +
Preference number: 6 (lower is better)
Translates to: LANSWRQLSDGC*LVIDSYCCTIK
Trigger: TTTAATGGTGCAACAGTAACTGTCTATCACCAGCCAGCACCCATCGCTCAGTTGTCTCCAGCTGTTAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000466713.1
ENST00000482337.5
CDS CCA 72 bp GAGGGGGAACAACAGGGTAACCAGACTGATAGCCATTaGATGGATAATATGGTGGTTGAGGAGGGACACTAC +
Preference number: 6 (lower is better)
Translates to: EGEQQGNQTDSH*MDNMVVEEGHY
Trigger: GTAGTGTCCCTCCTCAACCACCATATTATCCATCCAATGGCTATCAGTCTGGTTACCCTGTTGTTCCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS CCA 72 bp GGACTCTGTTTTTATTCCAGTCACTGGAAAGGCTGGTaGAGGCATCAACTGCCTGTCCCTCTCTCTCTCTTT +
Preference number: 6 (lower is better)
Translates to: GLCFYSSHWKGW*RHQLPVPLSLF
Trigger: AAAGAGAGAGAGAGGGACAGGCAGTTGATGCCTCCACCAGCCTTTCCAGTGACTGGAATAAAAACAGAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000465953.1
ENST00000466520.1
ENST00000478002.5
CDS GCA 72 bp CTCAGAAGCATTCTGAGTTGGTTTCAGCTTCCCTTTTaGCATGAGCATGGCATTAATCTTGGCAGCCACAGC +
Preference number: 6 (lower is better)
Translates to: LRSILSWFQLPF*HEHGINLGSHS
Trigger: GCTGTGGCTGCCAAGATTAATGCCATGCTCATGGCAAAAGGGAAGCTGAAACCAACTCAGAATGCTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000466713.1
ENST00000482337.5
ENST00000491599.1
CDS CAA 90 bp AACAGGGTAACCAGACTGATAGCCATTGGATGGATAATATGGTGGTaGAGGAGGGACACTACTTATAGCAGAGGGTTGTGTATAGCCTGG +
Preference number: 6 (lower is better)
Translates to: NRVTRLIAIGWIIWW*RRDTTYSRGLCIAW
Trigger: CCAGGCTATACACAACCCTCTGCTATAAGTAGTGTCCCTCCTCAACCACCATATTATCCATCCAATGGCTATCAGTCTGGTTACCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS CCA 72 bp AGGGTAACCAGACTGATAGCCATTGGATGGATAATATaGTGGTTGAGGAGGGACACTACTTATAGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: RVTRLIAIGWII*WLRRDTTYSRG
Trigger: CCCTCTGCTATAAGTAGTGTCCCTCCTCAACCACCATATTATCCATCCAATGGCTATCAGTCTGGTTACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS CCA 72 bp GTAACCAGACTGATAGCCATTGGATGGATAATATGGTaGTTGAGGAGGGACACTACTTATAGCAGAGGGTTG +
Preference number: 6 (lower is better)
Translates to: VTRLIAIGWIIW*LRRDTTYSRGL
Trigger: CAACCCTCTGCTATAAGTAGTGTCCCTCCTCAACCACCATATTATCCATCCAATGGCTATCAGTCTGGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS CCA 72 bp GGGAACAACAGGGTAACCAGACTGATAGCCATTGGATaGATAATATGGTGGTTGAGGAGGGACACTACTTAT +
Preference number: 6 (lower is better)
Translates to: GNNRVTRLIAIG*IIWWLRRDTTY
Trigger: ATAAGTAGTGTCCCTCCTCAACCACCATATTATCCATCCAATGGCTATCAGTCTGGTTACCCTGTTGTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS CAA 72 bp ACCAGACTGATAGCCATTGGATGGATAATATGGTGGTaGAGGAGGGACACTACTTATAGCAGAGGGTTGTGT +
Preference number: 6 (lower is better)
Translates to: TRLIAIGWIIWW*RRDTTYSRGLC
Trigger: ACACAACCCTCTGCTATAAGTAGTGTCCCTCCTCAACCACCATATTATCCATCCAATGGCTATCAGTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368320.7
ENST00000368321.8
ENST00000478002.5
CDS CAA 72 bp GTGGCAGCTTTTACCACTCCATTGGTGATAATTTCTTaGATCCGGTTTACAGCTCTGTCCACTAATTCCCGT +
Preference number: 6 (lower is better)
Translates to: VAAFTTPLVIIS*IRFTALSTNSR
Trigger: ACGGGAATTAGTGGACAGAGCTGTAAACCGGATCAAAGAAATTATCACCAATGGAGTGGTAAAAGCTGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000466713.1
ENST00000482337.5
CDS CCA 72 bp CTGGTGATAGACAGTTACTGTTGCACCATTAAAAGTTaGACTTGTTCCTGTGGCAGCTTTTACCACTCCATT +
Preference number: 6 (lower is better)
Translates to: LVIDSYCCTIKS*TCSCGSFYHSI
Trigger: AATGGAGTGGTAAAAGCTGCCACAGGAACAAGTCCAACTTTTAATGGTGCAACAGTAACTGTCTATCACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000466713.1
ENST00000482337.5
CDS GCA 72 bp TTGCCACATGAAGCTAGTGACTACTGCACTACACAATaGAGGTATATATTACCAACGAGAAAGCTGAGTTTC +
Preference number: 6 (lower is better)
Translates to: LPHEASDYCTTQ*RYILPTRKLSF
Trigger: GAAACTCAGCTTTCTCGTTGGTAATATATACCTGCATTGTGTAGTGCAGTAGTCACTAGCTTCATGTGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491599.1
CDS CAA 90 bp CCATTAAAAGTTGGACTTGTTCCTGTGGCAGCTTTTACCACTCCATaGGTGATAATTTCTTTGATCCGGTTTACAGCTCTGTCCACTAAT +
Preference number: 6 (lower is better)
Translates to: PLKVGLVPVAAFTTP*VIISLIRFTALSTN
Trigger: ATTAGTGGACAGAGCTGTAAACCGGATCAAAGAAATTATCACCAATGGAGTGGTAAAAGCTGCCACAGGAACAAGTCCAACTTTTAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368319.3
ENST00000368320.7
ENST00000368321.8
ENST00000466713.1
ENST00000482337.5
CDS TCA 72 bp CTACACAATGCAGGTATATATTACCAACGAGAAAGCTaGGTTTCATTATGCCAAAGCCATGTAACCAGTAAC +
Preference number: 6 (lower is better)
Translates to: LHNAGIYYQRES*VSLCQSHVTSN
Trigger: GTTACTGGTTACATGGCTTTGGCATAATGAAACTCAGCTTTCTCGTTGGTAATATATACCTGCATTGTGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491599.1