Pregenerated sensors for KHDC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000135314Ensembl transcript IDs: ENST00000257765.9, ENST00000370384.7, ENST00000433730.1, ENST00000474593.1, ENST00000484801.5
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCAGCGGCTGCAGGCCTaGCCGATTGTGAGGAGACAGCGGTACCTCCTGGGCCGCGCACCC | + |
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Preference number: 5 (lower is better) Translates to: RRRRRRRQRRQRLQA*PIVRRQRYLLGRAP Trigger: GGGTGCGCGGCCCAGGAGGTACCGCTGTCTCCTCACAATCGGCCAGGCCTGCAGCCGCTGCCGCCGCTGCCGCCGCCGCCGCCGCCGCCG 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000257765.9 ENST00000433730.1 |
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| CDS TCA 90 bp | GGCGGCGGCGGCAGCGGCGGCAGCGGCTGCAGGCCTGGCCGATTGTaGGGAGACAGCGGTACCTCCTGGGCCGCGCACCCGACCCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: GGGGSGGSGCRPGRL*GDSGTSWAAHPTLP Trigger: TGGAAGGGTCGGGTGCGCGGCCCAGGAGGTACCGCTGTCTCCTCACAATCGGCCAGGCCTGCAGCCGCTGCCGCCGCTGCCGCCGCCGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000257765.9 ENST00000433730.1 |
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| CDS CCA 90 bp | GCCGCCCGCCTCCAGGAAAGCCCGAGGCACTGTAGCAGGAGGGTCTaGGCTCCGCGCCTTAATTACACCGCCCTGGACCCGCCTCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: AARLQESPRHCSRRV*APRLNYTALDPPLP Trigger: CGGAAGAGGCGGGTCCAGGGCGGTGTAATTAAGGCGCGGAGCCCAGACCCTCCTGCTACAGTGCCTCGGGCTTTCCTGGAGGCGGGCGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370384.7 |
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| CDS CCA 90 bp | GGACCAATGCACAGTCTAGGTGGATTAACGCGCCACCGCGAGAAGTaGGCACGGGACCACATGCGGCTGGCAAGACGTCCCAGGGCTCAA | + |
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Preference number: 5 (lower is better) Translates to: GPMHSLGGLTRHREK*ARDHMRLARRPRAQ Trigger: TTGAGCCCTGGGACGTCTTGCCAGCCGCATGTGGTCCCGTGCCCACTTCTCGCGGTGGCGCGTTAATCCACCTAGACTGTGCATTGGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370384.7 ENST00000484801.5 |
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| CDS CCA 90 bp | CTTCGGGTCGGGGTCAACCCAGACTGGACCAATGCACAGTCTAGGTaGATTAACGCGCCACCGCGAGAAGTGGGCACGGGACCACATGCG | + |
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Preference number: 5 (lower is better) Translates to: LRVGVNPDWTNAQSR*INAPPREVGTGPHA Trigger: CGCATGTGGTCCCGTGCCCACTTCTCGCGGTGGCGCGTTAATCCACCTAGACTGTGCATTGGTCCAGTCTGGGTTGACCCCGACCCGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370384.7 ENST00000484801.5 |
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| CDS GCA 90 bp | CCAGTCTGTTTGCAGGCAGTGGCACCCAGCCTGGTTGCAACCCTGTaGGGGGTGACACGGCTCTATGGGAAGTGTGTCCATCCCGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: PVCLQAVAPSLVATL*GVTRLYGKCVHPGK Trigger: CTTTCCGGGATGGACACACTTCCCATAGAGCCGTGTCACCCCGCACAGGGTTGCAACCAGGCTGGGTGCCACTGCCTGCAAACAGACTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS TCA 90 bp | TGGGATCTGTGCACTGCTGAGGCCTTGTACTGGCTAGCCAGGATCTaGGGGAGCCAATTAGCGGGTGCCCCTGGAGGAGGTGGAGCTTAC | + |
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Preference number: 5 (lower is better) Translates to: WDLCTAEALYWLARI*GSQLAGAPGGGGAY Trigger: GTAAGCTCCACCTCCTCCAGGGGCACCCGCTAATTGGCTCCCTCAGATCCTGGCTAGCCAGTACAAGGCCTCAGCAGTGCACAGATCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS CCA 90 bp | AGGACGCGAAGGAAAGGGCCACTTCGGGTCGGGGTCAACCCAGACTaGACCAATGCACAGTCTAGGTGGATTAACGCGCCACCGCGAGAA | + |
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Preference number: 5 (lower is better) Translates to: RTRRKGPLRVGVNPD*TNAQSRWINAPPRE Trigger: TTCTCGCGGTGGCGCGTTAATCCACCTAGACTGTGCATTGGTCCAGTCTGGGTTGACCCCGACCCGAAGTGGCCCTTTCCTTCGCGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370384.7 ENST00000484801.5 |
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| CDS CCA 90 bp | GTTCATGCACCCTACCATGCGAGCGCCACCTGGACTGGCTGGAGATaGGATCTGTGCACTGCTGAGGCCTTGTACTGGCTAGCCAGGATC | + |
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Preference number: 5 (lower is better) Translates to: VHAPYHASATWTGWR*DLCTAEALYWLARI Trigger: GATCCTGGCTAGCCAGTACAAGGCCTCAGCAGTGCACAGATCCCATCTCCAGCCAGTCCAGGTGGCGCTCGCATGGTAGGGTGCATGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS CCA 90 bp | GGCACCCAGCCTGGTTGCAACCCTGTGCGGGGTGACACGGCTCTATaGGAAGTGTGTCCATCCCGGAAAGGGACTCCTTTTGCATACTTG | + |
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Preference number: 5 (lower is better) Translates to: GTQPGCNPVRGDTAL*EVCPSRKGTPFAYL Trigger: CAAGTATGCAAAAGGAGTCCCTTTCCGGGATGGACACACTTCCCATAGAGCCGTGTCACCCCGCACAGGGTTGCAACCAGGCTGGGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS CCA 90 bp | GTACTGGCTAGCCAGGATCTGAGGGAGCCAATTAGCGGGTGCCCCTaGAGGAGGTGGAGCTTACAGAAGGAACTAACCTGGCACCATGGG | + |
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Preference number: 5 (lower is better) Translates to: VLASQDLREPISGCP*RRWSLQKELTWHHG Trigger: CCCATGGTGCCAGGTTAGTTCCTTCTGTAAGCTCCACCTCCTCCAGGGGCACCCGCTAATTGGCTCCCTCAGATCCTGGCTAGCCAGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS CCA 90 bp | TGTACTCCAACACAGGTTCATGCACCCTACCATGCGAGCGCCACCTaGACTGGCTGGAGATGGGATCTGTGCACTGCTGAGGCCTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: CTPTQVHAPYHASAT*TGWRWDLCTAEALY Trigger: GTACAAGGCCTCAGCAGTGCACAGATCCCATCTCCAGCCAGTCCAGGTGGCGCTCGCATGGTAGGGTGCATGAACCTGTGTTGGAGTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS GCA 90 bp | GGAAACAACTGGAGCAAAGAAGGCCTGTACTCCAACACAGGTTCATaGACCCTACCATGCGAGCGCCACCTGGACTGGCTGGAGATGGGA | + |
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Preference number: 5 (lower is better) Translates to: GNNWSKEGLYSNTGS*TLPCERHLDWLEMG Trigger: TCCCATCTCCAGCCAGTCCAGGTGGCGCTCGCATGGTAGGGTGCATGAACCTGTGTTGGAGTACAGGCCTTCTTTGCTCCAGTTGTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS TCA 90 bp | CCACGTAAACCATCTTTGGGCCTTGATCGTTTTCCAATAACCGACTaGACTGAGGGCGTGACCAAACGACAAGAACCGGAGGAGAGGACC | + |
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Preference number: 5 (lower is better) Translates to: PRKPSLGLDRFPITD*TEGVTKRQEPEERT Trigger: GGTCCTCTCCTCCGGTTCTTGTCGTTTGGTCACGCCCTCAGTTCAGTCGGTTATTGGAAAACGATCAAGGCCCAAAGATGGTTTACGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370384.7 ENST00000484801.5 |
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| CDS CCA 90 bp | TTTCCGCTCCTTGAGTTTCTCTCTCGATTTCTGCGGATCCAAAGGTaGAAAGACACTGTCCCGATCAGGAGCATCGCAAGGGTCTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: FPLLEFLSRFLRIQR*KDTVPIRSIARVWR Trigger: TCTCCAGACCCTTGCGATGCTCCTGATCGGGACAGTGTCTTTCCACCTTTGGATCCGCAGAAATCGAGAGAGAAACTCAAGGAGCGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370384.7 ENST00000474593.1 ENST00000484801.5 |
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| CDS GCA 90 bp | TGTCCATCCCGGAAAGGGACTCCTTTTGCATACTTGCCTCACTGGTaGAGGTTTAGGCACATTCTGAAACCATCAGTGCTTTACTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: CPSRKGTPFAYLPHW*RFRHILKPSVLYLV Trigger: CACCAAGTAAAGCACTGATGGTTTCAGAATGTGCCTAAACCTGCACCAGTGAGGCAAGTATGCAAAAGGAGTCCCTTTCCGGGATGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000474593.1 ENST00000484801.5 |
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| CDS CCA 90 bp | TATTCTGAGACTGTTTCAATCACAAATAAGACTCGGAACAGCCTCTaGAAGGCCGACAGCATTTCGCGTTTCTGGCCGTTCAGGGATGCT | + |
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Preference number: 5 (lower is better) Translates to: YSETVSITNKTRNSL*KADSISRFWPFRDA Trigger: AGCATCCCTGAACGGCCAGAAACGCGAAATGCTGTCGGCCTTCCAGAGGCTGTTCCGAGTCTTATTTGTGATTGAAACAGTCTCAGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474593.1 |
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| CDS CCA 90 bp | GTGTGTCCATCCCGGAAAGGGACTCCTTTTGCATACTTGCCTCACTaGTGCAGGTTTAGGCACATTCTGAAACCATCAGTGCTTTACTTG | + |
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Preference number: 5 (lower is better) Translates to: VCPSRKGTPFAYLPH*CRFRHILKPSVLYL Trigger: CAAGTAAAGCACTGATGGTTTCAGAATGTGCCTAAACCTGCACCAGTGAGGCAAGTATGCAAAAGGAGTCCCTTTCCGGGATGGACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000474593.1 ENST00000484801.5 |
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| CDS TCA 90 bp | CTCCTTTTGCATACTTGCCTCACTGGTGCAGGTTTAGGCACATTCTaGAACCATCAGTGCTTTACTTGGTGGCTGGTCACCTTTTGGATC | + |
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Preference number: 5 (lower is better) Translates to: LLLHTCLTGAGLGTF*NHQCFTWWLVTFWI Trigger: GATCCAAAAGGTGACCAGCCACCAAGTAAAGCACTGATGGTTTCAGAATGTGCCTAAACCTGCACCAGTGAGGCAAGTATGCAAAAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000474593.1 ENST00000484801.5 |
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| CDS CCA 90 bp | TATTCTGAGACTGTTTCAATCACAAATAAGACTCGGAACAGCCTCTaGAAGGCCGACAGCATTTCGCGTTTCTGGCCTGGGAAAGTAAGG | + |
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Preference number: 5 (lower is better) Translates to: YSETVSITNKTRNSL*KADSISRFWPGKVR Trigger: CCTTACTTTCCCAGGCCAGAAACGCGAAATGCTGTCGGCCTTCCAGAGGCTGTTCCGAGTCTTATTTGTGATTGAAACAGTCTCAGAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370384.7 ENST00000484801.5 |
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| CDS TCA 90 bp | CGATCAGGAGCATCGCAAGGGTCTGGAGAAAGGGCCATCCATAAATaGAGATCAGGACTCCGTATTCTGAGACTGTTTCAATCACAAATA | + |
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Preference number: 5 (lower is better) Translates to: RSGASQGSGERAIHK*RSGLRILRLFQSQI Trigger: TATTTGTGATTGAAACAGTCTCAGAATACGGAGTCCTGATCTTCATTTATGGATGGCCCTTTCTCCAGACCCTTGCGATGCTCCTGATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370384.7 ENST00000474593.1 ENST00000484801.5 |
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| CDS CCA 90 bp | GCCTTCCGCCATGATTGTAAGTTTCCTGAGGTCTCCGCAGCAATGTaGAACTGTGAGTCAATTAAACCTCTTTTCTTTGTAAGGTACCCA | + |
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Preference number: 5 (lower is better) Translates to: AFRHDCKFPEVSAAM*NCESIKPLFFVRYP Trigger: TGGGTACCTTACAAAGAAAAGAGGTTTAATTGACTCACAGTTCCACATTGCTGCGGAGACCTCAGGAAACTTACAATCATGGCGGAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS TCA 90 bp | CATTGCAGCAATCATCCTCATTCTAATGTATCCATTGTCCATTGCTaGGAGAAAGAAATGTATGAACTCTACCTAATGTTGGTGAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: HCSNHPHSNVSIVHC*EKEMYELYLMLVSS Trigger: ACTGCTCACCAACATTAGGTAGAGTTCATACATTTCTTTCTCTCAGCAATGGACAATGGATACATTAGAATGAGGATGATTGCTGCAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS CCA 72 bp | CGGCGGCGGCGGCAGCGGCGGCAGCGGCTGCAGGCCTaGCCGATTGTGAGGAGACAGCGGTACCTCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: RRRRQRRQRLQA*PIVRRQRYLLG Trigger: GCCCAGGAGGTACCGCTGTCTCCTCACAATCGGCCAGGCCTGCAGCCGCTGCCGCCGCTGCCGCCGCCGCCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000257765.9 ENST00000433730.1 |
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| CDS CCA 72 bp | CTCCAGGAAAGCCCGAGGCACTGTAGCAGGAGGGTCTaGGCTCCGCGCCTTAATTACACCGCCCTGGACCCG | + |
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Preference number: 6 (lower is better) Translates to: LQESPRHCSRRV*APRLNYTALDP Trigger: CGGGTCCAGGGCGGTGTAATTAAGGCGCGGAGCCCAGACCCTCCTGCTACAGTGCCTCGGGCTTTCCTGGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370384.7 |
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| CDS CCA 72 bp | CACAGTCTAGGTGGATTAACGCGCCACCGCGAGAAGTaGGCACGGGACCACATGCGGCTGGCAAGACGTCCC | + |
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Preference number: 6 (lower is better) Translates to: HSLGGLTRHREK*ARDHMRLARRP Trigger: GGGACGTCTTGCCAGCCGCATGTGGTCCCGTGCCCACTTCTCGCGGTGGCGCGTTAATCCACCTAGACTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370384.7 ENST00000484801.5 |
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| CDS GCA 72 bp | GCGAGCGCCACCTGGACTGGCTGGAGATGGGATCTGTaGACTGCTGAGGCCTTGTACTGGCTAGCCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: ASATWTGWRWDL*TAEALYWLARI Trigger: GATCCTGGCTAGCCAGTACAAGGCCTCAGCAGTGCACAGATCCCATCTCCAGCCAGTCCAGGTGGCGCTCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS GCA 72 bp | TTGCAGGCAGTGGCACCCAGCCTGGTTGCAACCCTGTaGGGGGTGACACGGCTCTATGGGAAGTGTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LQAVAPSLVATL*GVTRLYGKCVH Trigger: ATGGACACACTTCCCATAGAGCCGTGTCACCCCGCACAGGGTTGCAACCAGGCTGGGTGCCACTGCCTGCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS CCA 72 bp | GGGGTCAACCCAGACTGGACCAATGCACAGTCTAGGTaGATTAACGCGCCACCGCGAGAAGTGGGCACGGGA | + |
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Preference number: 6 (lower is better) Translates to: GVNPDWTNAQSR*INAPPREVGTG Trigger: TCCCGTGCCCACTTCTCGCGGTGGCGCGTTAATCCACCTAGACTGTGCATTGGTCCAGTCTGGGTTGACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370384.7 ENST00000484801.5 |
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| CDS GCA 72 bp | GGCCTGTACTCCAACACAGGTTCATGCACCCTACCATaGGAGCGCCACCTGGACTGGCTGGAGATGGGATCT | + |
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Preference number: 6 (lower is better) Translates to: GLYSNTGSCTLP*ERHLDWLEMGS Trigger: AGATCCCATCTCCAGCCAGTCCAGGTGGCGCTCGCATGGTAGGGTGCATGAACCTGTGTTGGAGTACAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS CCA 72 bp | CTGAGGGAGCCAATTAGCGGGTGCCCCTGGAGGAGGTaGAGCTTACAGAAGGAACTAACCTGGCACCATGGG | + |
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Preference number: 6 (lower is better) Translates to: LREPISGCPWRR*SLQKELTWHHG Trigger: CCCATGGTGCCAGGTTAGTTCCTTCTGTAAGCTCCACCTCCTCCAGGGGCACCCGCTAATTGGCTCCCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS GCA 72 bp | TGGAGCAAAGAAGGCCTGTACTCCAACACAGGTTCATaGACCCTACCATGCGAGCGCCACCTGGACTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: WSKEGLYSNTGS*TLPCERHLDWL Trigger: CAGCCAGTCCAGGTGGCGCTCGCATGGTAGGGTGCATGAACCTGTGTTGGAGTACAGGCCTTCTTTGCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS GCA 72 bp | GGTTGGGAATTTGAGACCAGCCTGGTTGCAACCCTGTaGGGGGTGACACGGCTCTATGGGAAGTGTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: GWEFETSLVATL*GVTRLYGKCVH Trigger: ATGGACACACTTCCCATAGAGCCGTGTCACCCCGCACAGGGTTGCAACCAGGCTGGTCTCAAATTCCCAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000474593.1 |
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| CDS CCA 72 bp | GAGGTGGAGCTTACAGAAGGAACTAACCTGGCACCATaGGCCAATCTAGAGCAGTCTTGTCCTGTCCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: EVELTEGTNLAP*ANLEQSCPVPS Trigger: ACTGGGGACAGGACAAGACTGCTCTAGATTGGCCCATGGTGCCAGGTTAGTTCCTTCTGTAAGCTCCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS CCA 72 bp | TGTAAAGGGCAAGACCAGGTGGAAGTAATCGGATCATaGGGGCAGTTTCCCCCATGCTGTTCTCGTGATGAG | + |
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Preference number: 6 (lower is better) Translates to: CKGQDQVEVIGS*GQFPPCCSRDE Trigger: CTCATCACGAGAACAGCATGGGGGAAACTGCCCCCATGATCCGATTACTTCCACCTGGTCTTGCCCTTTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS TCA 72 bp | CCATCTTTGGGCCTTGATCGTTTTCCAATAACCGACTaGACTGAGGGCGTGACCAAACGACAAGAACCGGAG | + |
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Preference number: 6 (lower is better) Translates to: PSLGLDRFPITD*TEGVTKRQEPE Trigger: CTCCGGTTCTTGTCGTTTGGTCACGCCCTCAGTTCAGTCGGTTATTGGAAAACGATCAAGGCCCAAAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370384.7 ENST00000484801.5 |
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| CDS CCA 72 bp | ACTGTTTCAATCACAAATAAGACTCGGAACAGCCTCTaGAAGGCCGACAGCATTTCGCGTTTCTGGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: TVSITNKTRNSL*KADSISRFWPG Trigger: CCCAGGCCAGAAACGCGAAATGCTGTCGGCCTTCCAGAGGCTGTTCCGAGTCTTATTTGTGATTGAAACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370384.7 ENST00000484801.5 |
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| CDS CCA 72 bp | CTTGAGTTTCTCTCTCGATTTCTGCGGATCCAAAGGTaGAAAGACACTGTCCCGATCAGGAGCATCGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: LEFLSRFLRIQR*KDTVPIRSIAR Trigger: CCTTGCGATGCTCCTGATCGGGACAGTGTCTTTCCACCTTTGGATCCGCAGAAATCGAGAGAGAAACTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370384.7 ENST00000474593.1 ENST00000484801.5 |
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| CDS TCA 72 bp | CATACTTGCCTCACTGGTGCAGGTTTAGGCACATTCTaGAACCATCAGTGCTTTACTTGGTGGCTGGTCACC | + |
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Preference number: 6 (lower is better) Translates to: HTCLTGAGLGTF*NHQCFTWWLVT Trigger: GGTGACCAGCCACCAAGTAAAGCACTGATGGTTTCAGAATGTGCCTAAACCTGCACCAGTGAGGCAAGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000474593.1 ENST00000484801.5 |
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| CDS CCA 72 bp | ACTGTTTCAATCACAAATAAGACTCGGAACAGCCTCTaGAAGGCCGACAGCATTTCGCGTTTCTGGCCGTTC | + |
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Preference number: 6 (lower is better) Translates to: TVSITNKTRNSL*KADSISRFWPF Trigger: GAACGGCCAGAAACGCGAAATGCTGTCGGCCTTCCAGAGGCTGTTCCGAGTCTTATTTGTGATTGAAACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474593.1 |
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| CDS GCA 72 bp | CGGAAAGGGACTCCTTTTGCATACTTGCCTCACTGGTaGAGGTTTAGGCACATTCTGAAACCATCAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: RKGTPFAYLPHW*RFRHILKPSVL Trigger: AAGCACTGATGGTTTCAGAATGTGCCTAAACCTGCACCAGTGAGGCAAGTATGCAAAAGGAGTCCCTTTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000474593.1 ENST00000484801.5 |
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| CDS TCA 72 bp | GCATCGCAAGGGTCTGGAGAAAGGGCCATCCATAAATaGAGATCAGGACTCCGTATTCTGAGACTGTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: ASQGSGERAIHK*RSGLRILRLFQ Trigger: TTGAAACAGTCTCAGAATACGGAGTCCTGATCTTCATTTATGGATGGCCCTTTCTCCAGACCCTTGCGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370384.7 ENST00000474593.1 ENST00000484801.5 |
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| CDS CAA 72 bp | AGGTTTAGGCACATTCTGAAACCATCAGTGCTTTACTaGGTGGCTGGTCACCTTTTGGATCGGCATCTAGTC | + |
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Preference number: 6 (lower is better) Translates to: RFRHILKPSVLY*VAGHLLDRHLV Trigger: GACTAGATGCCGATCCAAAAGGTGACCAGCCACCAAGTAAAGCACTGATGGTTTCAGAATGTGCCTAAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000474593.1 ENST00000484801.5 |
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| CDS CAA 72 bp | TTTTTGCAAATATGTATAGCGGGGCTCATTAGGCAATaGCCTGGACTCTCATCCCAGTCCACTTCTATTTAT | + |
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Preference number: 6 (lower is better) Translates to: FLQICIAGLIRQ*PGLSSQSTSIY Trigger: ATAAATAGAAGTGGACTGGGATGAGAGTCCAGGCAATTGCCTAATGAGCCCCGCTATACATATTTGCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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| CDS CCA 72 bp | CATGATTGTAAGTTTCCTGAGGTCTCCGCAGCAATGTaGAACTGTGAGTCAATTAAACCTCTTTTCTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: HDCKFPEVSAAM*NCESIKPLFFV Trigger: TACAAAGAAAAGAGGTTTAATTGACTCACAGTTCCACATTGCTGCGGAGACCTCAGGAAACTTACAATCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484801.5 |
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