Pregenerated sensors for KDSR-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000267390Ensembl transcript IDs: ENST00000589905.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCCCAGGCTGAGCCCGCTCCGGGAGCCTCCAGCCGCCCTTTCCGATaGTCCGGGGCCTCCGAGCAACCCAGCGGGCAGTCCCAAGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: SQAEPAPGASSRPFR*SGASEQPSGQSQAE Trigger: CTCGGCTTGGGACTGCCCGCTGGGTTGCTCGGAGGCCCCGGAGCATCGGAAAGGGCGGCTGGAGGCTCCCGGAGCGGGCTCAGCCTGGGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS CCA 90 bp | TCCCGAAGAGCGAGTCTTCGCAGCCCTTCCCGGCGCGCTCGCATCTaGCGCTGTCCGGAGCCCGCTCGCGACGCACAGGGACGGGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: SRRASLRSPSRRARI*RCPEPARDAQGREA Trigger: GGCCTCCCGTCCCTGTGCGTCGCGAGCGGGCTCCGGACAGCGCCAGATGCGAGCGCGCCGGGAAGGGCTGCGAAGACTCGCTCTTCGGGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS TCA 90 bp | TCCGGGGCCTCCGAGCAACCCAGCGGGCAGTCCCAAGCCGAGGGCTaGACTCCAGGGAGGAGCGCTCGTCACGCCCACACTGGAGGCCGT | + |
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Preference number: 5 (lower is better) Translates to: SGASEQPSGQSQAEG*TPGRSARHAHTGGR Trigger: ACGGCCTCCAGTGTGGGCGTGACGAGCGCTCCTCCCTGGAGTTCAGCCCTCGGCTTGGGACTGCCCGCTGGGTTGCTCGGAGGCCCCGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS CCA 90 bp | AGCCGAGGGCTGAACTCCAGGGAGGAGCGCTCGTCACGCCCACACTaGAGGCCGTGGCAGGCCTGGAAACCCGCCCTGCGGGGTCCTAAG | + |
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Preference number: 5 (lower is better) Translates to: SRGLNSREERSSRPH*RPWQAWKPALRGPK Trigger: CTTAGGACCCCGCAGGGCGGGTTTCCAGGCCTGCCACGGCCTCCAGTGTGGGCGTGACGAGCGCTCCTCCCTGGAGTTCAGCCCTCGGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS CCA 90 bp | AGGGAGGAGCGCTCGTCACGCCCACACTGGAGGCCGTGGCAGGCCTaGAAACCCGCCCTGCGGGGTCCTAAGAAGCCATTCGAGCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: REERSSRPHWRPWQA*KPALRGPKKPFELP Trigger: CGGGAGCTCGAATGGCTTCTTAGGACCCCGCAGGGCGGGTTTCCAGGCCTGCCACGGCCTCCAGTGTGGGCGTGACGAGCGCTCCTCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS CCA 90 bp | CTGAACTCCAGGGAGGAGCGCTCGTCACGCCCACACTGGAGGCCGTaGCAGGCCTGGAAACCCGCCCTGCGGGGTCCTAAGAAGCCATTC | + |
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Preference number: 5 (lower is better) Translates to: LNSREERSSRPHWRP*QAWKPALRGPKKPF Trigger: GAATGGCTTCTTAGGACCCCGCAGGGCGGGTTTCCAGGCCTGCCACGGCCTCCAGTGTGGGCGTGACGAGCGCTCCTCCCTGGAGTTCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS GCA 90 bp | CGTCACGCCCACACTGGAGGCCGTGGCAGGCCTGGAAACCCGCCCTaGGGGGTCCTAAGAAGCCATTCGAGCTCCCGAAGAGCGAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: RHAHTGGRGRPGNPP*GVLRSHSSSRRASL Trigger: AAGACTCGCTCTTCGGGAGCTCGAATGGCTTCTTAGGACCCCGCAGGGCGGGTTTCCAGGCCTGCCACGGCCTCCAGTGTGGGCGTGACG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS CCA 90 bp | CCAAGATGGCTCCATCACATGTCTGGTGTCTCAAGTTGGGCTGGCTaGACTGTTCTCTTTGATGTGATCTCTCATCATGCAGTAGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: PRWLHHMSGVSSWAG*TVLFDVISHHAVVQ Trigger: CTGGACTACTGCATGATGAGAGATCACATCAAAGAGAACAGTCCAGCCAGCCCAACTTGAGACACCAGACATGTGATGGAGCCATCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS CCA 90 bp | GTGAGGAATCCAAGATGGCTCCATCACATGTCTGGTGTCTCAAGTTaGGCTGGCTGGACTGTTCTCTTTGATGTGATCTCTCATCATGCA | + |
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Preference number: 5 (lower is better) Translates to: VRNPRWLHHMSGVSS*AGWTVLFDVISHHA Trigger: TGCATGATGAGAGATCACATCAAAGAGAACAGTCCAGCCAGCCCAACTTGAGACACCAGACATGTGATGGAGCCATCTTGGATTCCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS CCA 90 bp | GCCATTTATTATTATTCACAAGTCTGCAATTCAGGCAGAACTCCATaGAGAGGGTTTGCCTCTGCTCCACATGGTGTTGGCTGGGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: AIYYYSQVCNSGRTP*RGFASAPHGVGWGE Trigger: CTCACCCCAGCCAACACCATGTGGAGCAGAGGCAAACCCTCTCCATGGAGTTCTGCCTGAATTGCAGACTTGTGAATAATAATAAATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS GCA 72 bp | GAGCCCGCTCCGGGAGCCTCCAGCCGCCCTTTCCGATaGTCCGGGGCCTCCGAGCAACCCAGCGGGCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: EPAPGASSRPFR*SGASEQPSGQS Trigger: GGACTGCCCGCTGGGTTGCTCGGAGGCCCCGGAGCATCGGAAAGGGCGGCTGGAGGCTCCCGGAGCGGGCTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS CCA 72 bp | GCGAGTCTTCGCAGCCCTTCCCGGCGCGCTCGCATCTaGCGCTGTCCGGAGCCCGCTCGCGACGCACAGGGA | + |
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Preference number: 6 (lower is better) Translates to: ASLRSPSRRARI*RCPEPARDAQG Trigger: TCCCTGTGCGTCGCGAGCGGGCTCCGGACAGCGCCAGATGCGAGCGCGCCGGGAAGGGCTGCGAAGACTCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS CCA 72 bp | AGGGAGGAGCGCTCGTCACGCCCACACTGGAGGCCGTaGCAGGCCTGGAAACCCGCCCTGCGGGGTCCTAAG | + |
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Preference number: 6 (lower is better) Translates to: REERSSRPHWRP*QAWKPALRGPK Trigger: CTTAGGACCCCGCAGGGCGGGTTTCCAGGCCTGCCACGGCCTCCAGTGTGGGCGTGACGAGCGCTCCTCCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS CCA 72 bp | CTGAACTCCAGGGAGGAGCGCTCGTCACGCCCACACTaGAGGCCGTGGCAGGCCTGGAAACCCGCCCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: LNSREERSSRPH*RPWQAWKPALR Trigger: CCGCAGGGCGGGTTTCCAGGCCTGCCACGGCCTCCAGTGTGGGCGTGACGAGCGCTCCTCCCTGGAGTTCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS TCA 72 bp | TCCGAGCAACCCAGCGGGCAGTCCCAAGCCGAGGGCTaGACTCCAGGGAGGAGCGCTCGTCACGCCCACACT | + |
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Preference number: 6 (lower is better) Translates to: SEQPSGQSQAEG*TPGRSARHAHT Trigger: AGTGTGGGCGTGACGAGCGCTCCTCCCTGGAGTTCAGCCCTCGGCTTGGGACTGCCCGCTGGGTTGCTCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS CCA 72 bp | CGCTCGTCACGCCCACACTGGAGGCCGTGGCAGGCCTaGAAACCCGCCCTGCGGGGTCCTAAGAAGCCATTC | + |
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Preference number: 6 (lower is better) Translates to: RSSRPHWRPWQA*KPALRGPKKPF Trigger: GAATGGCTTCTTAGGACCCCGCAGGGCGGGTTTCCAGGCCTGCCACGGCCTCCAGTGTGGGCGTGACGAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS GCA 72 bp | CACACTGGAGGCCGTGGCAGGCCTGGAAACCCGCCCTaGGGGGTCCTAAGAAGCCATTCGAGCTCCCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: HTGGRGRPGNPP*GVLRSHSSSRR Trigger: TCTTCGGGAGCTCGAATGGCTTCTTAGGACCCCGCAGGGCGGGTTTCCAGGCCTGCCACGGCCTCCAGTGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS CCA 72 bp | TATGGAATGGAGCCCGGGATTTCAGAGCGTAGTCGCTaGGCTCCCAGGCTGAGCCCGCTCCGGGAGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: YGMEPGISERSR*APRLSPLREPP Trigger: TGGAGGCTCCCGGAGCGGGCTCAGCCTGGGAGCCCAGCGACTACGCTCTGAAATCCCGGGCTCCATTCCATA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS TCA 72 bp | AGGGTTTGCCTCTGCTCCACATGGTGTTGGCTGGGGTaGGGAATCCAAGATGGCTCCATCACATGTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: RVCLCSTWCWLG*GIQDGSITCLV Trigger: CACCAGACATGTGATGGAGCCATCTTGGATTCCTCACCCCAGCCAACACCATGTGGAGCAGAGGCAAACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS CCA 72 bp | TGGAGAGGGTTTGCCTCTGCTCCACATGGTGTTGGCTaGGGTGAGGAATCCAAGATGGCTCCATCACATGTC | + |
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Preference number: 6 (lower is better) Translates to: WRGFASAPHGVG*GEESKMAPSHV Trigger: GACATGTGATGGAGCCATCTTGGATTCCTCACCCCAGCCAACACCATGTGGAGCAGAGGCAAACCCTCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS CCA 72 bp | TGGGGTGAGGAATCCAAGATGGCTCCATCACATGTCTaGTGTCTCAAGTTGGGCTGGCTGGACTGTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: WGEESKMAPSHV*CLKLGWLDCSL Trigger: AAGAGAACAGTCCAGCCAGCCCAACTTGAGACACCAGACATGTGATGGAGCCATCTTGGATTCCTCACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS GCA 72 bp | TCCATGGCAGCTTACTCCCAATCCCGGAAGCTTCAATaGCTCTTAGTGATTCCTCAAAACTCCCTGTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: SMAAYSQSRKLQ*LLVIPQNSLLR Trigger: CCTTAACAGGGAGTTTTGAGGAATCACTAAGAGGCATTGAAGCTTCCGGGATTGGGAGTAAGCTGCCATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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| CDS CCA 72 bp | TATTATTCACAAGTCTGCAATTCAGGCAGAACTCCATaGAGAGGGTTTGCCTCTGCTCCACATGGTGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: YYSQVCNSGRTP*RGFASAPHGVG Trigger: GCCAACACCATGTGGAGCAGAGGCAAACCCTCTCCATGGAGTTCTGCCTGAATTGCAGACTTGTGAATAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589905.1 |
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