RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KDM7A-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000260231

Ensembl transcript IDs: ENST00000566699.2

Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp ATAACCGAGCCAGCTCCTCGCACGCTCCCGCCGTCCTCCTCCGGCTaGGGCCGCGCGCCCGCCGCCACCGCCACCACCGCGCGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: ITEPAPRTLPPSSSG*GRAPAATATTARVL
Trigger: GAGGACACGCGCGGTGGTGGCGGTGGCGGCGGGCGCGCGGCCGCAGCCGGAGGAGGACGGCGGGAGCGTGCGAGGAGCTGGCTCGGTTAT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS GCA 90 bp GTCCTCACGGGGCCTCAGCTCCCTCCGCCCCCGCAGCCGCCTGCGTaGCCTTCAACAGCTCCCTCCGCCCGGCCGTCGCGGAGAGGAGCG +
Preference number: 5 (lower is better)
Translates to: VLTGPQLPPPPQPPA*PSTAPSARPSRRGA
Trigger: CGCTCCTCTCCGCGACGGCCGGGCGGAGGGAGCTGTTGAAGGGCACGCAGGCGGCTGCGGGGGCGGAGGGAGCTGAGGCCCCGTGAGGAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS GCA 90 bp ACTCACGCCGGTGCGGGGCCGCAGCTCCGGTTCTCGCTGGGCGGCTaGGGAGGGCTGGGCGATTCTCTCAGCGTCGCGAGGCGACCCGGG +
Preference number: 5 (lower is better)
Translates to: THAGAGPQLRFSLGG*GGLGDSLSVARRPG
Trigger: CCCGGGTCGCCTCGCGACGCTGAGAGAATCGCCCAGCCCTCCGCAGCCGCCCAGCGAGAACCGGAGCTGCGGCCCCGCACCGGCGTGAGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS GCA 90 bp AGGCACAACCGGCTCGGCGTGTCAGCTCAGCTGGACTCACGCCGGTaGGGGGCCGCAGCTCCGGTTCTCGCTGGGCGGCTGCGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: RHNRLGVSAQLDSRR*GAAAPVLAGRLRRA
Trigger: AGCCCTCCGCAGCCGCCCAGCGAGAACCGGAGCTGCGGCCCCGCACCGGCGTGAGTCCAGCTGAGCTGACACGCCGAGCCGGTTGTGCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 90 bp GTGCGGGGCCGCAGCTCCGGTTCTCGCTGGGCGGCTGCGGAGGGCTaGGCGATTCTCTCAGCGTCGCGAGGCGACCCGGGCAGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: VRGRSSGSRWAAAEG*AILSASRGDPGSSK
Trigger: TTTGCTGCTGCCCGGGTCGCCTCGCGACGCTGAGAGAATCGCCCAGCCCTCCGCAGCCGCCCAGCGAGAACCGGAGCTGCGGCCCCGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 90 bp TCAGCTGGACTCACGCCGGTGCGGGGCCGCAGCTCCGGTTCTCGCTaGGCGGCTGCGGAGGGCTGGGCGATTCTCTCAGCGTCGCGAGGC +
Preference number: 5 (lower is better)
Translates to: SAGLTPVRGRSSGSR*AAAEGWAILSASRG
Trigger: GCCTCGCGACGCTGAGAGAATCGCCCAGCCCTCCGCAGCCGCCCAGCGAGAACCGGAGCTGCGGCCCCGCACCGGCGTGAGTCCAGCTGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 90 bp TTCCTCCCTCGGAAAGGCACAACCGGCTCGGCGTGTCAGCTCAGCTaGACTCACGCCGGTGCGGGGCCGCAGCTCCGGTTCTCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: FLPRKGTTGSACQLS*THAGAGPQLRFSLG
Trigger: GCCCAGCGAGAACCGGAGCTGCGGCCCCGCACCGGCGTGAGTCCAGCTGAGCTGACACGCCGAGCCGGTTGTGCCTTTCCGAGGGAGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS TCA 90 bp ACTTCTCCGCTTCCCCTCTTCGGGACGCGGCACCTCTTCTGCCCTTaGGCACTCCGCAGGAACTTCCCCCGGCCTCGGCTCTCGCTCCGA +
Preference number: 5 (lower is better)
Translates to: TSPLPLFGTRHLFCP*ALRRNFPRPRLSLR
Trigger: TCGGAGCGAGAGCCGAGGCCGGGGGAAGTTCCTGCGGAGTGCTCAAGGGCAGAAGAGGTGCCGCGTCCCGAAGAGGGGAAGCGGAGAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 90 bp TTGGGGACAGCCCTCCCGCAACTAACGGTGGCTCCATCGACGCTCTaGTCTCCTTGCTGCTCGCTGGGAATTCGGGTGGGACGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: LGTALPQLTVAPSTL*SPCCSLGIRVGRFP
Trigger: TGGAAAACGTCCCACCCGAATTCCCAGCGAGCAGCAAGGAGACCAGAGCGTCGATGGAGCCACCGTTAGTTGCGGGAGGGCTGTCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS GCA 90 bp GCCCTCCCGCAACTAACGGTGGCTCCATCGACGCTCTGGTCTCCTTaGTGCTCGCTGGGAATTCGGGTGGGACGTTTTCCAAAGTTTGGA +
Preference number: 5 (lower is better)
Translates to: ALPQLTVAPSTLWSP*CSLGIRVGRFPKFG
Trigger: TCCAAACTTTGGAAAACGTCCCACCCGAATTCCCAGCGAGCAGCAAGGAGACCAGAGCGTCGATGGAGCCACCGTTAGTTGCGGGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS GCA 90 bp CTCCCGCAACTAACGGTGGCTCCATCGACGCTCTGGTCTCCTTGCTaGTCGCTGGGAATTCGGGTGGGACGTTTTCCAAAGTTTGGATTC +
Preference number: 5 (lower is better)
Translates to: LPQLTVAPSTLWSPC*SLGIRVGRFPKFGF
Trigger: GAATCCAAACTTTGGAAAACGTCCCACCCGAATTCCCAGCGAGCAGCAAGGAGACCAGAGCGTCGATGGAGCCACCGTTAGTTGCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 90 bp TCCTTGCTGCTCGCTGGGAATTCGGGTGGGACGTTTTCCAAAGTTTaGATTCCACGGCACATTCCTCCCTCGGAAAGGCACAACCGGCTC +
Preference number: 5 (lower is better)
Translates to: SLLLAGNSGGTFSKV*IPRHIPPSERHNRL
Trigger: GAGCCGGTTGTGCCTTTCCGAGGGAGGAATGTGCCGTGGAATCCAAACTTTGGAAAACGTCCCACCCGAATTCCCAGCGAGCAGCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 90 bp CTCCATCGACGCTCTGGTCTCCTTGCTGCTCGCTGGGAATTCGGGTaGGACGTTTTCCAAAGTTTGGATTCCACGGCACATTCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: LHRRSGLLAARWEFG*DVFQSLDSTAHSSL
Trigger: GAGGGAGGAATGTGCCGTGGAATCCAAACTTTGGAAAACGTCCCACCCGAATTCCCAGCGAGCAGCAAGGAGACCAGAGCGTCGATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 90 bp GCCGGCTCTTCTCTATCCCTCTCTCCACCAACCCCATTTCAAGGTTaGTCCCTCCCAGCGGACGACAGTGATGAATTCCTCTTGGGGACA +
Preference number: 5 (lower is better)
Translates to: AGSSLSLSPPTPFQG*SLPADDSDEFLLGT
Trigger: TGTCCCCAAGAGGAATTCATCACTGTCGTCCGCTGGGAGGGACCAACCTTGAAATGGGGTTGGTGGAGAGAGGGATAGAGAAGAGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS GCA 90 bp AGTCCAGGTGGCCCCCAGAGGACATCCCACAACAGGCTGCTTTGGTaGTCTTTAGCCAGACTCCAACAAGACAGCTTTGCATGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: SPGGPQRTSHNRLLW*SLARLQQDSFACLL
Trigger: GAGAAGGCATGCAAAGCTGTCTTGTTGGAGTCTGGCTAAAGAGCACCAAAGCAGCCTGTTGTGGGATGTCCTCTGGGGGCCACCTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 90 bp GCAAGTCCAGGTGGCCCCCAGAGGACATCCCACAACAGGCTGCTTTaGTGCTCTTTAGCCAGACTCCAACAAGACAGCTTTGCATGCCTT +
Preference number: 5 (lower is better)
Translates to: ASPGGPQRTSHNRLL*CSLARLQQDSFACL
Trigger: AAGGCATGCAAAGCTGTCTTGTTGGAGTCTGGCTAAAGAGCACCAAAGCAGCCTGTTGTGGGATGTCCTCTGGGGGCCACCTGGACTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS GCA 90 bp CTGCTTTGGTGCTCTTTAGCCAGACTCCAACAAGACAGCTTTGCATaGCTTCTCTTCACTGCTGTATTGTCTCGACAACACACACCTTCA +
Preference number: 5 (lower is better)
Translates to: LLWCSLARLQQDSFA*LLFTAVLSRQHTPS
Trigger: TGAAGGTGTGTGTTGTCGAGACAATACAGCAGTGAAGAGAAGGCATGCAAAGCTGTCTTGTTGGAGTCTGGCTAAAGAGCACCAAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 90 bp GACTGGCCCGAGGTCACAGATTATAGAAAGCAGGACCTGAGTGCATaGGTCTTTCCACTCCAGCAATATGTGATGCCTATGCCAAAATTA +
Preference number: 5 (lower is better)
Translates to: DWPEVTDYRKQDLSA*VFPLQQYVMPMPKL
Trigger: TAATTTTGGCATAGGCATCACATATTGCTGGAGTGGAAAGACCCATGCACTCAGGTCCTGCTTTCTATAATCTGTGACCTCGGGCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 90 bp GAAGGAAGGAAGGAAGGAAGGAAAGAAAGGAAAGAAAGAAAGAAATaGAGAATTAGATCAGCGACTCTTTGCCTGGGGGTGGGTGACAGA +
Preference number: 5 (lower is better)
Translates to: EGRKEGRKERKERKK*RIRSATLCLGVGDR
Trigger: TCTGTCACCCACCCCCAGGCAAAGAGTCGCTGATCTAATTCTCCATTTCTTTCTTTCTTTCCTTTCTTTCCTTCCTTCCTTCCTTCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS GCA 90 bp TTTAGCCAGACTCCAACAAGACAGCTTTGCATGCCTTCTCTTCACTaGTGTATTGTCTCGACAACACACACCTTCAACAAAGTACATTTA +
Preference number: 5 (lower is better)
Translates to: FSQTPTRQLCMPSLH*CIVSTTHTFNKVHL
Trigger: TAAATGTACTTTGTTGAAGGTGTGTGTTGTCGAGACAATACAGCAGTGAAGAGAAGGCATGCAAAGCTGTCTTGTTGGAGTCTGGCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS GCA 72 bp GGTGCGGGGCCGCAGCTCCGGTTCTCGCTGGGCGGCTaGGGAGGGCTGGGCGATTCTCTCAGCGTCGCGAGG +
Preference number: 6 (lower is better)
Translates to: GAGPQLRFSLGG*GGLGDSLSVAR
Trigger: CCTCGCGACGCTGAGAGAATCGCCCAGCCCTCCGCAGCCGCCCAGCGAGAACCGGAGCTGCGGCCCCGCACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS GCA 72 bp CGGCTCGGCGTGTCAGCTCAGCTGGACTCACGCCGGTaGGGGGCCGCAGCTCCGGTTCTCGCTGGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: RLGVSAQLDSRR*GAAAPVLAGRL
Trigger: CAGCCGCCCAGCGAGAACCGGAGCTGCGGCCCCGCACCGGCGTGAGTCCAGCTGAGCTGACACGCCGAGCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 72 bp CGCAGCTCCGGTTCTCGCTGGGCGGCTGCGGAGGGCTaGGCGATTCTCTCAGCGTCGCGAGGCGACCCGGGC +
Preference number: 6 (lower is better)
Translates to: RSSGSRWAAAEG*AILSASRGDPG
Trigger: GCCCGGGTCGCCTCGCGACGCTGAGAGAATCGCCCAGCCCTCCGCAGCCGCCCAGCGAGAACCGGAGCTGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 72 bp CTCACGCCGGTGCGGGGCCGCAGCTCCGGTTCTCGCTaGGCGGCTGCGGAGGGCTGGGCGATTCTCTCAGCG +
Preference number: 6 (lower is better)
Translates to: LTPVRGRSSGSR*AAAEGWAILSA
Trigger: CGCTGAGAGAATCGCCCAGCCCTCCGCAGCCGCCCAGCGAGAACCGGAGCTGCGGCCCCGCACCGGCGTGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 72 bp CGGAAAGGCACAACCGGCTCGGCGTGTCAGCTCAGCTaGACTCACGCCGGTGCGGGGCCGCAGCTCCGGTTC +
Preference number: 6 (lower is better)
Translates to: RKGTTGSACQLS*THAGAGPQLRF
Trigger: GAACCGGAGCTGCGGCCCCGCACCGGCGTGAGTCCAGCTGAGCTGACACGCCGAGCCGGTTGTGCCTTTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS TCA 72 bp CTTCCCCTCTTCGGGACGCGGCACCTCTTCTGCCCTTaGGCACTCCGCAGGAACTTCCCCCGGCCTCGGCTC +
Preference number: 6 (lower is better)
Translates to: LPLFGTRHLFCP*ALRRNFPRPRL
Trigger: GAGCCGAGGCCGGGGGAAGTTCCTGCGGAGTGCTCAAGGGCAGAAGAGGTGCCGCGTCCCGAAGAGGGGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CAA 72 bp GCTTCCCCTCTTCGGGACGCGGCACCTCTTCTGCCCTaGAGCACTCCGCAGGAACTTCCCCCGGCCTCGGCT +
Preference number: 6 (lower is better)
Translates to: ASPLRDAAPLLP*STPQELPPASA
Trigger: AGCCGAGGCCGGGGGAAGTTCCTGCGGAGTGCTCAAGGGCAGAAGAGGTGCCGCGTCCCGAAGAGGGGAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CAA 90 bp AACTTCTCCGCTTCCCCTCTTCGGGACGCGGCACCTCTTCTGCCCTaGAGCACTCCGCAGGAACTTCCCCCGGCCTCGGCTCTCGCTCCG +
Preference number: 6 (lower is better)
Translates to: NFSASPLRDAAPLLP*STPQELPPASALAP
Trigger: CGGAGCGAGAGCCGAGGCCGGGGGAAGTTCCTGCGGAGTGCTCAAGGGCAGAAGAGGTGCCGCGTCCCGAAGAGGGGAAGCGGAGAAGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 72 bp GCCCTCCCGCAACTAACGGTGGCTCCATCGACGCTCTaGTCTCCTTGCTGCTCGCTGGGAATTCGGGTGGGA +
Preference number: 6 (lower is better)
Translates to: ALPQLTVAPSTL*SPCCSLGIRVG
Trigger: TCCCACCCGAATTCCCAGCGAGCAGCAAGGAGACCAGAGCGTCGATGGAGCCACCGTTAGTTGCGGGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CAA 72 bp TGGTCCCTCCCAGCGGACGACAGTGATGAATTCCTCTaGGGGACAGCCCTCCCGCAACTAACGGTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: WSLPADDSDEFL*GTALPQLTVAP
Trigger: TGGAGCCACCGTTAGTTGCGGGAGGGCTGTCCCCAAGAGGAATTCATCACTGTCGTCCGCTGGGAGGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS GCA 72 bp AGGCAGGAGGATCCCTCGAACCCGGGAGGTGGAAGTTaGAATGAGCCGAGATCACAGCACTGCACTGCACTC +
Preference number: 6 (lower is better)
Translates to: RQEDPSNPGGGS*NEPRSQHCTAL
Trigger: GAGTGCAGTGCAGTGCTGTGATCTCGGCTCATTGCAACTTCCACCTCCCGGGTTCGAGGGATCCTCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CAA 90 bp TTTCAAGGTTGGTCCCTCCCAGCGGACGACAGTGATGAATTCCTCTaGGGGACAGCCCTCCCGCAACTAACGGTGGCTCCATCGACGCTC +
Preference number: 6 (lower is better)
Translates to: FQGWSLPADDSDEFL*GTALPQLTVAPSTL
Trigger: GAGCGTCGATGGAGCCACCGTTAGTTGCGGGAGGGCTGTCCCCAAGAGGAATTCATCACTGTCGTCCGCTGGGAGGGACCAACCTTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS GCA 72 bp CTAACGGTGGCTCCATCGACGCTCTGGTCTCCTTGCTaGTCGCTGGGAATTCGGGTGGGACGTTTTCCAAAG +
Preference number: 6 (lower is better)
Translates to: LTVAPSTLWSPC*SLGIRVGRFPK
Trigger: CTTTGGAAAACGTCCCACCCGAATTCCCAGCGAGCAGCAAGGAGACCAGAGCGTCGATGGAGCCACCGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS GCA 72 bp CAACTAACGGTGGCTCCATCGACGCTCTGGTCTCCTTaGTGCTCGCTGGGAATTCGGGTGGGACGTTTTCCA +
Preference number: 6 (lower is better)
Translates to: QLTVAPSTLWSP*CSLGIRVGRFP
Trigger: TGGAAAACGTCCCACCCGAATTCCCAGCGAGCAGCAAGGAGACCAGAGCGTCGATGGAGCCACCGTTAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CAA 90 bp CTCCTTGCTGCTCGCTGGGAATTCGGGTGGGACGTTTTCCAAAGTTaGGATTCCACGGCACATTCCTCCCTCGGAAAGGCACAACCGGCT +
Preference number: 6 (lower is better)
Translates to: LLAARWEFGWDVFQS*DSTAHSSLGKAQPA
Trigger: AGCCGGTTGTGCCTTTCCGAGGGAGGAATGTGCCGTGGAATCCAAACTTTGGAAAACGTCCCACCCGAATTCCCAGCGAGCAGCAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS GCA 72 bp GGAGGTGGAAGTTGCAATGAGCCGAGATCACAGCACTaGACTGCACTCCAGCGCGGGCAACAAGAACGAAAC +
Preference number: 6 (lower is better)
Translates to: GGGSCNEPRSQH*TALQRGQQERN
Trigger: GTTTCGTTCTTGTTGCCCGCGCTGGAGTGCAGTGCAGTGCTGTGATCTCGGCTCATTGCAACTTCCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CAA 90 bp AGCAAGTCCAGGTGGCCCCCAGAGGACATCCCACAACAGGCTGCTTaGGTGCTCTTTAGCCAGACTCCAACAAGACAGCTTTGCATGCCT +
Preference number: 6 (lower is better)
Translates to: SKSRWPPEDIPQQAA*VLFSQTPTRQLCMP
Trigger: AGGCATGCAAAGCTGTCTTGTTGGAGTCTGGCTAAAGAGCACCAAAGCAGCCTGTTGTGGGATGTCCTCTGGGGGCCACCTGGACTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 72 bp CTCGCTGGGAATTCGGGTGGGACGTTTTCCAAAGTTTaGATTCCACGGCACATTCCTCCCTCGGAAAGGCAC +
Preference number: 6 (lower is better)
Translates to: LAGNSGGTFSKV*IPRHIPPSERH
Trigger: GTGCCTTTCCGAGGGAGGAATGTGCCGTGGAATCCAAACTTTGGAAAACGTCCCACCCGAATTCCCAGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 72 bp CGCTCTGGTCTCCTTGCTGCTCGCTGGGAATTCGGGTaGGACGTTTTCCAAAGTTTGGATTCCACGGCACAT +
Preference number: 6 (lower is better)
Translates to: RSGLLAARWEFG*DVFQSLDSTAH
Trigger: ATGTGCCGTGGAATCCAAACTTTGGAAAACGTCCCACCCGAATTCCCAGCGAGCAGCAAGGAGACCAGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 72 bp TGGCTCCATCGACGCTCTGGTCTCCTTGCTGCTCGCTaGGAATTCGGGTGGGACGTTTTCCAAAGTTTGGAT +
Preference number: 6 (lower is better)
Translates to: WLHRRSGLLAAR*EFGWDVFQSLD
Trigger: ATCCAAACTTTGGAAAACGTCCCACCCGAATTCCCAGCGAGCAGCAAGGAGACCAGAGCGTCGATGGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CAA 72 bp GCTCGCTGGGAATTCGGGTGGGACGTTTTCCAAAGTTaGGATTCCACGGCACATTCCTCCCTCGGAAAGGCA +
Preference number: 6 (lower is better)
Translates to: ARWEFGWDVFQS*DSTAHSSLGKA
Trigger: TGCCTTTCCGAGGGAGGAATGTGCCGTGGAATCCAAACTTTGGAAAACGTCCCACCCGAATTCCCAGCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 72 bp TCTCTATCCCTCTCTCCACCAACCCCATTTCAAGGTTaGTCCCTCCCAGCGGACGACAGTGATGAATTCCTC +
Preference number: 6 (lower is better)
Translates to: SLSLSPPTPFQG*SLPADDSDEFL
Trigger: GAGGAATTCATCACTGTCGTCCGCTGGGAGGGACCAACCTTGAAATGGGGTTGGTGGAGAGAGGGATAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS TCA 72 bp CTTCTGGGGAGGCCTCGGGAAACTTACAATCATGGCTaGAGACAAATTGCATCATATAGCCGGGGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: LLGRPRETYNHG*RQIASYSRGRS
Trigger: GCTCCTGCCCCGGCTATATGATGCAATTTGTCTTCAGCCATGATTGTAAGTTTCCCGAGGCCTCCCCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CAA 72 bp GGCCTCGGGAAACTTACAATCATGGCTGAAGACAAATaGCATCATATAGCCGGGGCAGGAGCAAAAGAGAGA +
Preference number: 6 (lower is better)
Translates to: GLGKLTIMAEDK*HHIAGAGAKER
Trigger: TCTCTCTTTTGCTCCTGCCCCGGCTATATGATGCAATTTGTCTTCAGCCATGATTGTAAGTTTCCCGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 72 bp GAGGTCACAGATTATAGAAAGCAGGACCTGAGTGCATaGGTCTTTCCACTCCAGCAATATGTGATGCCTATG +
Preference number: 6 (lower is better)
Translates to: EVTDYRKQDLSA*VFPLQQYVMPM
Trigger: CATAGGCATCACATATTGCTGGAGTGGAAAGACCCATGCACTCAGGTCCTGCTTTCTATAATCTGTGACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS GCA 72 bp ACTCCAACAAGACAGCTTTGCATGCCTTCTCTTCACTaGTGTATTGTCTCGACAACACACACCTTCAACAAA +
Preference number: 6 (lower is better)
Translates to: TPTRQLCMPSLH*CIVSTTHTFNK
Trigger: TTTGTTGAAGGTGTGTGTTGTCGAGACAATACAGCAGTGAAGAGAAGGCATGCAAAGCTGTCTTGTTGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS CCA 72 bp AAGGAAGGAAGGAAAGAAAGGAAAGAAAGAAAGAAATaGAGAATTAGATCAGCGACTCTTTGCCTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: KEGRKERKERKK*RIRSATLCLGV
Trigger: CACCCCCAGGCAAAGAGTCGCTGATCTAATTCTCCATTTCTTTCTTTCTTTCCTTTCTTTCCTTCCTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566699.2
CDS TCA 72 bp GAGACACTTAAAAACTTCAGTTACAGCTCTAATATATaGGACTTCAGTCAAGTTACTAGCTTTCCTCAACTA +
Preference number: 6 (lower is better)
Translates to: ETLKNFSYSSNI*DFSQVTSFPQL
Trigger: TAGTTGAGGAAAGCTAGTAACTTGACTGAAGTCTCATATATTAGAGCTGTAACTGAAGTTTTTAAGTGTCTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566699.2