RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KDM7A (Homo sapiens)

Ensembl gene IDs: ENSG00000006459

Ensembl transcript IDs: ENST00000397560.7, ENST00000472616.1

Found 471 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACACAAACTGCTCCAGGCAGGGGGACAGCGGAAGCTCCAGGCTCCTaGACCCCTAGACTGGTCTCCAAAGGGAAGAATGGCTGCAACAGC +
Preference number: 1 (lower is better)
Translates to: TQTAPGRGTAEAPGS*TPRLVSKGKNGCNS
Trigger: GCTGTTGCAGCCATTCTTCCCTTTGGAGACCAGTCTAGGGGTGCAGGAGCCTGGAGCTTCCGCTGTCCCCCTGCCTGGAGCAGTTTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR TCA 90 bp TGGTTGCTGATAGGTGGTGGATTTGATGCCGGTCTCTTGGTGGGGTaGAGGGGCACCGAGAAGGAAGTTTCACCAACTGGCCTTTCTGGG +
Preference number: 1 (lower is better)
Translates to: WLLIGGGFDAGLLVG*RGTEKEVSPTGLSG
Trigger: CCCAGAAAGGCCAGTTGGTGAAACTTCCTTCTCGGTGCCCCTTCACCCCACCAAGAGACCGGCATCAAATCCACCACCTATCAGCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR GCA 90 bp GCACCGAGAAGGAAGTTTCACCAACTGGCCTTTCTGGGCTTAGACTaGCATTACTTATCTGGCACGCCCCCGAAGTCAGGTTTGAATTCT +
Preference number: 1 (lower is better)
Translates to: APRRKFHQLAFLGLD*HYLSGTPPKSGLNS
Trigger: AGAATTCAAACCTGACTTCGGGGGCGTGCCAGATAAGTAATGGCAGTCTAAGCCCAGAAAGGCCAGTTGGTGAAACTTCCTTCTCGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR GCA 90 bp GGTATGGAGCATAAAAGTATCATAAGGTATAACCTCTGCAGCAGGTaGCAGTCCTGTTGTCCAACAGCAGCAGTACGAAGAAGGCCTGCT +
Preference number: 1 (lower is better)
Translates to: GMEHKSIIRYNLCSR*QSCCPTAAVRRRPA
Trigger: AGCAGGCCTTCTTCGTACTGCTGCTGTTGGACAACAGGACTGGCACCTGCTGCAGAGGTTATACCTTATGATACTTTTATGCTCCATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR TCA 90 bp TTCCTGGAGAAGATACCTTCAAGGGCAGAGACCACAACTGCAAATTaGTGTTCCCCAACAGTACTAGGTAGTGCTGGGCACACAGTAGAT +
Preference number: 1 (lower is better)
Translates to: FLEKIPSRAETTTAN*CSPTVLGSAGHTVD
Trigger: ATCTACTGTGTGCCCAGCACTACCTAGTACTGTTGGGGAACATCAATTTGCAGTTGTGGTCTCTGCCCTTGAAGGTATCTTCTCCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR CCA 90 bp GTTTCACCAACTGGCCTTTCTGGGCTTAGACTGCCATTACTTATCTaGCACGCCCCCGAAGTCAGGTTTGAATTCTGCATATACTTTCCA +
Preference number: 1 (lower is better)
Translates to: VSPTGLSGLRLPLLI*HAPEVRFEFCIYFP
Trigger: TGGAAAGTATATGCAGAATTCAAACCTGACTTCGGGGGCGTGCCAGATAAGTAATGGCAGTCTAAGCCCAGAAAGGCCAGTTGGTGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR TCA 90 bp TGTACACTTTCCCTGCCTGCAGGCAAAAGATGGGAAATACTGTTATaGATCAGCAAAGAAATGCTCTTCAAGCTTCAGCACCCCACCTCC +
Preference number: 1 (lower is better)
Translates to: CTLSLPAGKRWEILL*ISKEMLFKLQHPTS
Trigger: GGAGGTGGGGTGCTGAAGCTTGAAGAGCATTTCTTTGCTGATTCATAACAGTATTTCCCATCTTTTGCCTGCAGGCAGGGAAAGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR CCA 90 bp GAAGAATGGCTGCAACAGCAGCTCTGTCACACAAAGAAACGTGCATaGCCATTTCTGTTCAACTTAAGGATCTTCCCAAGACGTTGTTTG +
Preference number: 1 (lower is better)
Translates to: EEWLQQQLCHTKKRA*PFLFNLRIFPRRCL
Trigger: CAAACAACGTCTTGGGAAGATCCTTAAGTTGAACAGAAATGGCCATGCACGTTTCTTTGTGTGACAGAGCTGCTGTTGCAGCCATTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR GCA 90 bp AACAAATCAGGTATGGAGCATAAAAGTATCATAAGGTATAACCTCTaGAGCAGGTGCCAGTCCTGTTGTCCAACAGCAGCAGTACGAAGA +
Preference number: 1 (lower is better)
Translates to: NKSGMEHKSIIRYNL*SRCQSCCPTAAVRR
Trigger: TCTTCGTACTGCTGCTGTTGGACAACAGGACTGGCACCTGCTGCAGAGGTTATACCTTATGATACTTTTATGCTCCATACCTGATTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR GCA 90 bp GCAGCAGCTACCACAAAGTTCAGCCATTTCCATGAGATAAAGGGATaGATTATGGCCAGTAATGTTATAAGACGTTTGACCAGGAGTCAC +
Preference number: 1 (lower is better)
Translates to: AAATTKFSHFHEIKG*IMASNVIRRLTRSH
Trigger: GTGACTCCTGGTCAAACGTCTTATAACATTACTGGCCATAATGCATCCCTTTATCTCATGGAAATGGCTGAACTTTGTGGTAGCTGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR CCA 90 bp TGCATTATGGCCAGTAATGTTATAAGACGTTTGACCAGGAGTCACTaGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGG +
Preference number: 1 (lower is better)
Translates to: CIMASNVIRRLTRSH*ISGRIFTNSEKDTW
Trigger: CCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAACGTCTTATAACATTACTGGCCATAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR CCA 90 bp TCTGGAAGTATCAAACTGTTTAATCCAGGAGGAAGTCCTCAAGTCTaGATCTTCAGTCTTGACATGGTATCCTGTAATCTCAGCACTTTG +
Preference number: 1 (lower is better)
Translates to: SGSIKLFNPGGSPQV*IFSLDMVSCNLSTL
Trigger: CAAAGTGCTGAGATTACAGGATACCATGTCAAGACTGAAGATCCAGACTTGAGGACTTCCTCCTGGATTAAACAGTTTGATACTTCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR GCA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGACTATACACACAAACTaGTCCAGGCAGGGGGACAGC +
Preference number: 2 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWTIHTN*SRQGDS
Trigger: GCTGTCCCCCTGCCTGGAGCAGTTTGTGTGTATAGT...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCATGCCGGTCTCTTGGTaGGGTGAAGGGGCACCGAGA +
Preference number: 2 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQAMPVSW*GEGAPR
Trigger: TCTCGGTGCCCCTTCACCCCACCAAGAGACCGGCAT...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR TCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGAAGTGGGCTTCCGGACTaGAAGGACACACATGTCACA +
Preference number: 2 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRSGLPD*KDTHVT
Trigger: TGTGACATGTGTGTCCTTTCAGTCCGGAAGCCCACT...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGACCTGCACCCCTAGACTaGTCTCCAAAGGGAAGAATG +
Preference number: 2 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRPAPLD*SPKGRM
Trigger: CATTCTTCCCTTTGGAGACCAGTCTAGGGGTGCAGG...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGTTGATGCCGGTCTCTTaGTGGGGTGAAGGGGCACCG +
Preference number: 2 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMLMPVS*WGEGAP
Trigger: CGGTGCCCCTTCACCCCACCAAGAGACCGGCATCAA...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR CAA 90 bp GGCTTAGACTGCCATTACTTATCTGGCACGCCCCCGAAGTCAGGTTaGAATTCTGCATATACTTTCCATTCTGAAGGCTTGAGCCGCTGC +
Preference number: 2 (lower is better)
Translates to: GLDCHYLSGTPPKSG*NSAYTFHSEGLSRC
Trigger: GCAGCGGCTCAAGCCTTCAGAATGGAAAGTATATGCAGAATTCAAACCTGACTTCGGGGGCGTGCCAGATAAGTAATGGCAGTCTAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR TCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTGGTCTCTTGGTGGGGTaGAGGGGCACCGAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSGLLVG*RGTEKE
Trigger: TTCCTTCTCGGTGCCCCTTCACCCCACCAAGAGACC...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR TCA 90 bp CTGTTGTCCAACAGCAGCAGTACGAAGAAGGCCTGCTGTAGTTACAAATGTACTGATAGGTGGTGGATTTaGTGCCGGTCTCTTGGTGGG +
Preference number: 2 (lower is better)
Translates to: LLSNSSSTKKACCSYKCTDRWWI*CRSLGG
Trigger: CCCACCAAGAGACCGGCATCAAATCCACCACCTATC...AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACTGCTGCTGTTGGACAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR GCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTGAAGCTCCAGGCTCCTaGACCCCTAGACTGGTCTCC +
Preference number: 2 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSEAPGS*TPRLVS
Trigger: GGAGACCAGTCTAGGGGTGCAGGAGCCTGGAGCTTC...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR GCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTAACCTCTGCAGCAGGTaGCAGTCCTGTTGTCCAACA +
Preference number: 2 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGNLCSR*QSCCPT
Trigger: TGTTGGACAACAGGACTGGCACCTGCTGCAGAGGTT...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAATGGTTATTGCTGAGTaGGTGTGGCACAGTGAAAAT +
Preference number: 2 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSMVIAE*VWHSEN
Trigger: ATTTTCACTGTGCCACACCCACTCAGCAATAACCAT...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCATCTTTCCACTGGTTTTaGCATAGTGTAGACAGGGTT +
Preference number: 2 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSSFHWF*HSVDRV
Trigger: AACCCTGTCTACACTATGCCAAAACCAGTGGAAAGA...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGATTGGTCCAGTCACTCTaGACCAGAAAGGCTACTTCA +
Preference number: 2 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRLVQSL*TRKATS
Trigger: TGAAGTAGCCTTTCTGGTTCAGAGTGACTGGACCAA...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAAGATTTTTGACATCCTaGGATAAGATGACTCTACCC +
Preference number: 2 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSRFLTS*DKMTLP
Trigger: GGGTAGAGTCATCTTATCTCAGGATGTCAAAAATCT...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR GCA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGAAGCTCCAGGCTCCTaGACCCCTAGACTGGTCTCC +
Preference number: 2 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFEAPGS*TPRLVS
Trigger: GGAGACCAGTCTAGGGGTGCAGGAGCCTGGAGCTTC...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTCCTGCACCCCTAGACTaGTCTCCAAAGGGAAGAATG +
Preference number: 2 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRPAPLD*SPKGRM
Trigger: CATTCTTCCCTTTGGAGACCAGTCTAGGGGTGCAGG...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGACCACCAGGTCCAAAATaGTTATTGCTGAGTGGGTGT +
Preference number: 2 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRPPGPK*LLLSGC
Trigger: ACACCCACTCAGCAATAACCATTTTGGACCTGGTGG...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAATGAGGGATCTTTCATaGAGTTCTTACACATTGGCT +
Preference number: 2 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSMRDLS*SSYTLA
Trigger: AGCCAATGTGTAAGAACTCCATGAAAGATCCCTCAT...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTATGGGTCATCACAAAATaGTGGGGAGTGCAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: SKLLVPNPELSLCILTFLWVITK*WGVQRE
Trigger: TTCCCTCTGCACTCCCCATCATTTTGTGATGACCCA...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTCACCACCAAGACTGGTaGGCTCTAGCTTCTCTTTAT +
Preference number: 2 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGHHQDW*ALASLY
Trigger: ATAAAGAGAAGCTAGAGCTCACCAGTCTTGGTGGTG...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR GCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTAACTTGGGAACATTTCTaGCCCACCCCCAGAAATCAC +
Preference number: 2 (lower is better)
Translates to: SKLLVPNPELSLCILTFLTWEHF*PTPRNH
Trigger: GTGATTTCTGGGGGTGGGGCAGAAATGTTCCCAAGT...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR GCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACAAAAGCCCAGGTCTTCTaGTTCCTTGCATGCTACACC +
Preference number: 2 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTKAQVF*FLACYT
Trigger: GGTGTAGCATGCAAGGAAGCAGAAGACCTGGGCTTT...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGAGAGTCACTGGATCAGTaGCCGAATTTTCACCAATTC +
Preference number: 2 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRESLDQ*PNFHQF
Trigger: GAATTGGTGAAAATTCGGCCACTGATCCAGTGACTC...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTTCTGTTGAAGATGTCTaGTGGCGTCTCCTTTCCTAC +
Preference number: 2 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGSVEDV*WRLLSY
Trigger: GTAGGAAAGGAGACGCCACCAGACATCTTCAACAGA...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGACCAATGGATCCCAGCTaGACAGTCACTTATTTGAAA +
Preference number: 2 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRPMDPS*TVTYLK
Trigger: TTTCAAATAAGTGACTGTTCAGCTGGGATCCATTGG...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGATCCATTCTGAAGGCTTaGGCCGCTGCTGTCCACATA +
Preference number: 2 (lower is better)
Translates to: FDQESLDQWPNFHQFRKRSILKA*AAAVHI
Trigger: TATGTGGACAGCAGCGGCTCAAGCCTTCAGAATGGA...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR GCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACAACCTCTGCAGCAGGTaGCAGTCCTGTTGTCCAACA +
Preference number: 2 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHNLCSR*QSCCPT
Trigger: TGTTGGACAACAGGACTGGCACCTGCTGCAGAGGTT...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGAATTGCTGAGTGGGTGTaGCACAGTGAAAATGCAGCA +
Preference number: 2 (lower is better)
Translates to: TVWEGRGISQTQIFDILRIAEWV*HSENAA
Trigger: TGCTGCATTTTCACTGTGCCACACCCACTCAGCAAT...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTCTCTATTGTCAGACTTaGGAACATTTCTGCCCCACC +
Preference number: 2 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRLYCQT*EHFCPT
Trigger: GGTGGGGCAGAAATGTTCCCAAGTCTGACAATAGAG...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGAAGCCTAAGGACACAGTaGATACTGGCCACAATTTTA +
Preference number: 2 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRSLRTQ*ILATIL
Trigger: TAAAATTGTGGCCAGTATCCACTGTGTCCTTAGGCT...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTTTGACCAGGAGTCACTaGATCAGTGGCCGAATTTTC +
Preference number: 2 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRLTRSH*ISGRIF
Trigger: GAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAA...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTATCCCCACAAGTTCCCTaGGGAGTTGCTAAGTCATTT +
Preference number: 2 (lower is better)
Translates to: SKLLVPNPELSLCILTFLSPQVP*GVAKSF
Trigger: AAATGACTTAGCAACTCCCCAGGGAACTTGTGGGGA...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR CAA 90 bp CCGAAGTCAGGTTTGAATTCTGCATATACTTTCCATTCTGAAGGCTaGAGCCGCTGCTGTCCACATAATTCCTACTTTGTACCCTCTGAC +
Preference number: 2 (lower is better)
Translates to: PKSGLNSAYTFHSEG*SRCCPHNSYFVPSD
Trigger: GTCAGAGGGTACAAAGTAGGAATTATGTGGACAGCAGCGGCTCAAGCCTTCAGAATGGAAAGTATATGCAGAATTCAAACCTGACTTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR TCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACTGGGTCATCACAAAATaGTGGGGAGTGCAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHWVITK*WGVQRE
Trigger: TTCCCTCTGCACTCCCCATCATTTTGTGATGACCCA...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTTCAAGGTTACACAGCTaGTACCTAAATGGCAGAACT +
Preference number: 2 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGSRLHS*YLNGRT
Trigger: AGTTCTGCCATTTAGGTATCAGCTGTGTAACCTTGA...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR GCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTGCTAAATGCTATCAGTaGTGTCTTCCTAAGTTGCTG +
Preference number: 2 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGAKCYQ*CLPKLL
Trigger: CAGCAACTTAGGAAGACAGCACTGATAGCATTTAGC...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR GCA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGATTTCTGGGCTTAGACTaGCATTACTTATCTGGCACG +
Preference number: 2 (lower is better)
Translates to: TVWEGRGISQTQIFDILRFLGLD*HYLSGT
Trigger: CGTGCCAGATAAGTAATGGCAGTCTAAGCCCAGAAA...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR CCA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGAGGAAGTCCTCAAGTCTaGATCTTCAGTCTTGACATG +
Preference number: 2 (lower is better)
Translates to: TVWEGRGISQTQIFDILRGSPQV*IFSLDM
Trigger: CATGTCAAGACTGAAGATCCAGACTTGAGGACTTCC...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR CCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTTCCCAAGACGTTGTTTaGCTGTTGCCATTCCTTTTT +
Preference number: 2 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGSQDVV*LLPFLF
Trigger: AAAAAGGAATGGCAACAGCCAAACAACGTCTTGGGA...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR CAA 90 bp TCTTACTGCTGCAGAGAGCATCTTTTGAAAAAGGCAGAAAGAATCTaGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACACTGGT +
Preference number: 2 (lower is better)
Translates to: SYCCREHLLKKAERI*SVEDVWWRLLSYTG
Trigger: ACCAGTGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCTTTTTCAAAAGATGCTCTCTGCAGCAGTAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCATAAAATTCAAGCCCTaGCAAGAGACCCTTTCCAGT +
Preference number: 2 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQAIKFKP*QETLSS
Trigger: ACTGGAAAGGGTCTCTTGTCAGGGCTTGAATTTTAT...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTGTTCAGCCATTTCCATaGGATAAAGGGATGCATTAT +
Preference number: 2 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGVQPFP*DKGMHY
Trigger: ATAATGCATCCCTTTATCTCATGGAAATGGCTGAAC...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCTTTCAAGGAAGCACATaGACATCATCTCATAGGGCA +
Preference number: 2 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQAFQGST*TSSHRA
Trigger: TGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAA...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTAAGAAATGGCCAAAATaGAACTGGTTGGAGACAAGT +
Preference number: 2 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGKKWPK*NWLETS
Trigger: ACTTGTCTCCAACCAGTTTCATTTTGGCCATTTCTT...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR GCA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGAAGGCTTGAGCCGCTaGTGTCCACATAATTCCTAC +
Preference number: 2 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFEGLSR*CPHNSY
Trigger: GTAGGAATTATGTGGACAGCAGCGGCTCAAGCCTTC...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR CCA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACTCTATTGTCAGACTTaGGAACATTTCTGCCCCACC +
Preference number: 2 (lower is better)
Translates to: FDQESLDQWPNFHQFRKRLYCQT*EHFCPT
Trigger: GGTGGGGCAGAAATGTTCCCAAGTCTGACAATAGAG...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGATGGATTCTATTCAAGTaGTTCTATTACCTCGCTGAA +
Preference number: 2 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRWILFK*FYYLAE
Trigger: TTCAGCGAGGTAATAGAACCACTTGAATAGAATCCA...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCCAGCTGATACCTAAATaGCAGAACTTCGACAAAAGC +
Preference number: 2 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQAQLIPK*QNFDKS
Trigger: GCTTTTGTCGAAGTTCTGCCATTTAGGTATCAGCTG...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTCTGAATCTGTGGGGATaGTACTTTCCTAATTCTTCA +
Preference number: 2 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGLNLWG*YFPNSS
Trigger: TGAAGAATTAGGAAAGTACCATCCCCACAGATTCAG...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCCCCACAAGTTCCCTaGGGAGTTGCTAAGTCATTT +
Preference number: 2 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSSPQVP*GVAKSF
Trigger: AAATGACTTAGCAACTCCCCAGGGAACTTGTGGGGA...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTAAACGAAATGAGAAATaGGGGATCTTTCATGGAGTT +
Preference number: 2 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGKRNEK*GIFHGV
Trigger: AACTCCATGAAAGATCCCTCATTTCTCATTTCGTTT...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTTTGGTCCAGTCACTCTaGACCAGAAAGGCTACTTCA +
Preference number: 2 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFLVQSL*TRKATS
Trigger: TGAAGTAGCCTTTCTGGTTCAGAGTGACTGGACCAA...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGAAGATTTTTGACATCCTaGGATAAGATGACTCTACCC +
Preference number: 2 (lower is better)
Translates to: TVWEGRGISQTQIFDILRRFLTS*DKMTLP
Trigger: GGGTAGAGTCATCTTATCTCAGGATGTCAAAAATCT...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR GCA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTATAAGGTATAACCTCTaGAGCAGGTGCCAGTCCTGT +
Preference number: 2 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFIRYNL*SRCQSC
Trigger: ACAGGACTGGCACCTGCTGCAGAGGTTATACCTTAT...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR GCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTCCAGAGCTGTCTTTGTaGATTCTCACCTTTCTAACC +
Preference number: 2 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSPELSL*ILTFLT
Trigger: GGTTAGAAAGGTGAGAATGCACAAAGACAGCTCTGG...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR GCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTACGTTTACCTTTTGTTaGCTGGTTGCTGATAGGTGG +
Preference number: 2 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSTFTFC*LVADRW
Trigger: CCACCTATCAGCAACCAGGCAACAAAAGGTAAACGT...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR CCA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTCCACCAGGTCCAAAATaGTTATTGCTGAGTGGGTGT +
Preference number: 2 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFPPGPK*LLLSGC
Trigger: ACACCCACTCAGCAATAACCATTTTGGACCTGGTGG...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGGAGTTCTTACACATTaGCTACGAAAGTGTTTCCCT +
Preference number: 2 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMGVLTH*LRKCFP
Trigger: AGGGAAACACTTTCGTAGCCAATGTGTAAGAACTCC...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTATATCCCATGACATTTTaGAATGGGGACACAAGAAGT +
Preference number: 2 (lower is better)
Translates to: SKLLVPNPELSLCILTFLYPMTF*NGDTRS
Trigger: ACTTCTTGTGTCCCCATTCCAAAATGTCATGGGATA...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTATAAGATTCAGACTTTaGTCCAGTCACTCTGAACCA +
Preference number: 2 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRIRFRL*SSHSEP
Trigger: TGGTTCAGAGTGACTGGACCAAAGTCTGAATCTTAT...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTATACTGCTAATTTCCTaGAGAAGATACCTTCAAGGG +
Preference number: 2 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRILLIS*RRYLQG
Trigger: CCCTTGAAGGTATCTTCTCCAGGAAATTAGCAGTAT...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTAAATCCAGCACCTTGTTaGAGATTCCTCGGATTTTTA +
Preference number: 2 (lower is better)
Translates to: SKLLVPNPELSLCILTFLNPAPC*RFLGFL
Trigger: TAAAAATCCGAGGAATCTCCAACAAGGTGCTGGATT...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR CAA 90 bp CATGAGATAAAGGGATGCATTATGGCCAGTAATGTTATAAGACGTTaGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCA +
Preference number: 2 (lower is better)
Translates to: HEIKGCIMASNVIRR*TRSHWISGRIFTNS
Trigger: TGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAACGTCTTATAACATTACTGGCCATAATGCATCCCTTTATCTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp CTGTTGTCCAACAGCAGCAGTACGAAGAAGGCCTGCTGTAGTTACAAATGTACTTCTTTACCCTACCACTaGAAATACATCAAGACACTA +
Preference number: 2 (lower is better)
Translates to: LLSNSSSTKKACCSYKCTSLPYH*KYIKTL
Trigger: TAGTGTCTTGATGTATTTTCAGTGGTAGGGTAAAGA...AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACTGCTGCTGTTGGACAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTCAATGTCAAACGAAATaGGAAATGAGGGATCTTTCA +
Preference number: 2 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRQCQTK*EMRDLS
Trigger: TGAAAGATCCCTCATTTCTCATTTCGTTTGACATTG...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTACCACAACTGCAAATTaGTGTTCCCCAACAGTACTA +
Preference number: 2 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSTTTAN*CSPTVL
Trigger: TAGTACTGTTGGGGAACATCAATTTGCAGTTGTGGT...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCAAGGTTACACAGCTaGTACCTAAATGGCAGAACT +
Preference number: 2 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSSRLHS*YLNGRT
Trigger: AGTTCTGCCATTTAGGTATCAGCTGTGTAACCTTGA...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCACTTGGAAGAATCACTaGATACAGTTTCGAAAGGTT +
Preference number: 2 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQATWKNH*IQFRKV
Trigger: AACCTTTCGAAACTGTATTCAGTGATTCTTCCAAGT...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACCGAAGATGCATTTCCTaGTCAGTGCTATTTCATACC +
Preference number: 2 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHRRCIS*SVLFHT
Trigger: GGTATGAAATAGCACTGATCAGGAAATGCATCTTCG...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGAATGAACCTTCCTTTCTaGTGCATTTCTGGCTTCTAC +
Preference number: 2 (lower is better)
Translates to: FDQESLDQWPNFHQFRKRMNLPF*CISGFY
Trigger: GTAGAAGCCAGAAATGCATCAGAAAGGAAGGTTCAT...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR TCA 90 bp ATGTCAAACGAAATGAGAAATGAGGGATCTTTCATGGAGTTCTTACACATTGGCATATACTTTCCATTCTaGAGGCTTGAGCCGCTGCTG +
Preference number: 2 (lower is better)
Translates to: MSNEMRNEGSFMEFLHIGIYFPF*RLEPLL
Trigger: CAGCAGCGGCTCAAGCCTTCAGAATGGAAAGTATAT...GCCAATGTGTAAGAACTCCATGAAAGATCCCTCATTTCTCATTTCGTTTGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR GCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACATTACAACTAGCTAAATaGTATCAGTGCTGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTLQLAK*YQCCLP
Trigger: AGGAAGACAGCACTGATAGCATTTAGCTAGTTGTAA...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR GCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTGAGTGTCACAGGTCTTaGATAGGTAAACTACTTGGA +
Preference number: 2 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSECHRS*IGKLLG
Trigger: TCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGACATGACATTTTGGAATaGGGACACAAGAAGTATTTC +
Preference number: 2 (lower is better)
Translates to: TVWEGRGISQTQIFDILRHDILE*GHKKYF
Trigger: GAAATACTTCTTGTGTCCCCATTCCAAAATGTCATG...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp CAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGATTCTATTCAAGTGTTGACCAGGAGTCACTaGATCAGTGGCCGAATTTTC +
Preference number: 2 (lower is better)
Translates to: QWPNFHQFRKRHMDSIQVLTRSH*ISGRIF
Trigger: GAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAA...CACTTGAATAGAATCCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTCTTTCACTTCTACAGTaGCATATCTCAGTTGAAACT +
Preference number: 2 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRLSLLQ*HISVET
Trigger: AGTTTCAACTGAGATATGCCACTGTAGAAGTGAAAG...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTATAAAATTCAAGCCCTaGCAAGAGACCCTTTCCAGT +
Preference number: 2 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFIKFKP*QETLSS
Trigger: ACTGGAAAGGGTCTCTTGTCAGGGCTTGAATTTTAT...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGTATTTCTAGGATACTaGACTACTACAAACTGCCAA +
Preference number: 2 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMVFLGY*TTTNCQ
Trigger: TTGGCAGTTTGTAGTAGTTCAGTATCCTAGAAATAC...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACTACTTTGTACCCTCTaGCTAATTTCTGATGAACCT +
Preference number: 2 (lower is better)
Translates to: FDQESLDQWPNFHQFRKRLLCTL*LISDEP
Trigger: AGGTTCATCAGAAATTAGTCAGAGGGTACAAAGTAG...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR GCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACAGTACGAAGAAGGCCTaGTGTAGTTACAAATGTACT +
Preference number: 2 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHSTKKA*CSYKCT
Trigger: AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACT...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR GCA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGCATGAGATAAAGGGATaGATTATGGCCAGTAATGTT +
Preference number: 2 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMHEIKG*IMASNV
Trigger: AACATTACTGGCCATAATGCATCCCTTTATCTCATG...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR GCA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGTTACAACTAGCTAAATaGTATCAGTGCTGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMLQLAK*YQCCLP
Trigger: AGGAAGACAGCACTGATAGCATTTAGCTAGTTGTAA...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTATGGTTATTGCTGAGTaGGTGTGGCACAGTGAAAAT +
Preference number: 2 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFMVIAE*VWHSEN
Trigger: ATTTTCACTGTGCCACACCCACTCAGCAATAACCAT...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGAATAAGATTCAGACTTTaGTCCAGTCACTCTGAACCA +
Preference number: 2 (lower is better)
Translates to: FDQESLDQWPNFHQFRKRIRFRL*SSHSEP
Trigger: TGGTTCAGAGTGACTGGACCAAAGTCTGAATCTTAT...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp CAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGATTCTATTCAAGTGGAGTCACTGGATCAGTaGCCGAATTTTCACCAATTC +
Preference number: 2 (lower is better)
Translates to: QWPNFHQFRKRHMDSIQVESLDQ*PNFHQF
Trigger: GAATTGGTGAAAATTCGGCCACTGATCCAGTGACTC...CACTTGAATAGAATCCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTAATCCAGCACCTTGTTaGAGATTCCTCGGATTTTTA +
Preference number: 2 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSNPAPC*RFLGFL
Trigger: TAAAAATCCGAGGAATCTCCAACAAGGTGCTGGATT...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGATCTTCAGTCTTGACATaGTATCCTGTAATCTCAGCA +
Preference number: 2 (lower is better)
Translates to: FDQESLDQWPNFHQFRKRSSVLT*YPVISA
Trigger: TGCTGAGATTACAGGATACCATGTCAAGACTGAAGA...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR CCA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAATTACCTTTTGTTGCCTaGTTGCTGATAGGTGGTGGA +
Preference number: 2 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKLPFVA*LLIGGG
Trigger: TCCACCACCTATCAGCAACCAGGCAACAAAAGGTAA...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR CCA 90 bp CAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGATTCTATTCAAGTGGGAGTTCTTACACATTaGCTACGAAAGTGTTTCCCT +
Preference number: 2 (lower is better)
Translates to: QWPNFHQFRKRHMDSIQVGVLTH*LRKCFP
Trigger: AGGGAAACACTTTCGTAGCCAATGTGTAAGAACTCC...CACTTGAATAGAATCCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAATACCCATCTTTCCACTaGTTTTGGCATAGTGTAGAC +
Preference number: 2 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKYPSFH*FWHSVD
Trigger: GTCTACACTATGCCAAAACCAGTGGAAAGATGGGTA...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACTGGATTCTATTCAAGTaGTTCTATTACCTCGCTGAA +
Preference number: 2 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHWILFK*FYYLAE
Trigger: TTCAGCGAGGTAATAGAACCACTTGAATAGAATCCA...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR TCA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAAGTTCTATTACCTCGCTaGAAGTTTTCTAACTTAGCC +
Preference number: 2 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKVLLPR*KFSNLA
Trigger: GGCTAAGTTAGAAAACTTTCAGCGAGGTAATAGAAC...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR GCA 90 bp ATGTCAAACGAAATGAGAAATGAGGGATCTTTCATGGAGTTCTTACACATTGGCAGTACGAAGAAGGCCTaGTGTAGTTACAAATGTACT +
Preference number: 2 (lower is better)
Translates to: MSNEMRNEGSFMEFLHIGSTKKA*CSYKCT
Trigger: AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACT...GCCAATGTGTAAGAACTCCATGAAAGATCCCTCATTTCTCATTTCGTTTGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR GCA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAATCACACAAAGAAACGTaGATGGCCATTTCTGTTCAA +
Preference number: 2 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKSHKET*MAISVQ
Trigger: TTGAACAGAAATGGCCATGCACGTTTCTTTGTGTGA...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR CCA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAAATGAGGGATCTTTCATaGAGTTCTTACACATTGGCT +
Preference number: 2 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKMRDLS*SSYTLA
Trigger: AGCCAATGTGTAAGAACTCCATGAAAGATCCCTCAT...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CCA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTACAAAGAAACGTGCATaGCCATTTCTGTTCAACTTA +
Preference number: 2 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFTKKRA*PFLFNL
Trigger: TAAGTTGAACAGAAATGGCCATGCACGTTTCTTTGT...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR GCA 90 bp CAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGATTCTATTCAAGTGCATGAGATAAAGGGATaGATTATGGCCAGTAATGTT +
Preference number: 2 (lower is better)
Translates to: QWPNFHQFRKRHMDSIQVHEIKG*IMASNV
Trigger: AACATTACTGGCCATAATGCATCCCTTTATCTCATG...CACTTGAATAGAATCCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR CCA 72 bp GGACAGCGGAAGCTCCAGGCTCCTGCACCCCTAGACTaGTCTCCAAAGGGAAGAATGGCTGCAACAGCAGCT +
Preference number: 3 (lower is better)
Translates to: GQRKLQAPAPLD*SPKGRMAATAA
Trigger: AGCTGCTGTTGCAGCCATTCTTCCCTTTGGAGACCAGTCTAGGGGTGCAGGAGCCTGGAGCTTCCGCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR TCA 72 bp ATAGGTGGTGGATTTGATGCCGGTCTCTTGGTGGGGTaGAGGGGCACCGAGAAGGAAGTTTCACCAACTGGC +
Preference number: 3 (lower is better)
Translates to: IGGGFDAGLLVG*RGTEKEVSPTG
Trigger: GCCAGTTGGTGAAACTTCCTTCTCGGTGCCCCTTCACCCCACCAAGAGACCGGCATCAAATCCACCACCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR CAA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCATTCCATTCTGAAGGCTaGAGCCGCTGCTGTCCACAT +
Preference number: 3 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSFHSEG*SRCCPH
Trigger: ATGTGGACAGCAGCGGCTCAAGCCTTCAGAATGGAA...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR CAA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAGGTCCAAAATGGTTATaGCTGAGTGGGTGTGGCACA +
Preference number: 3 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSGPKWL*LSGCGT
Trigger: TGTGCCACACCCACTCAGCAATAACCATTTTGGACC...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR GCA 72 bp AGGAAGTTTCACCAACTGGCCTTTCTGGGCTTAGACTaGCATTACTTATCTGGCACGCCCCCGAAGTCAGGT +
Preference number: 3 (lower is better)
Translates to: RKFHQLAFLGLD*HYLSGTPPKSG
Trigger: ACCTGACTTCGGGGGCGTGCCAGATAAGTAATGGCAGTCTAAGCCCAGAAAGGCCAGTTGGTGAAACTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR CAA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAGACCACAACTGCAAATaGATGTTCCCCAACAGTACT +
Preference number: 3 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSDHNCK*MFPNST
Trigger: AGTACTGTTGGGGAACATCAATTTGCAGTTGTGGTC...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAAATGTTATAAGACGTTaGACCAGGAGTCACTGGATC +
Preference number: 3 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSNVIRR*TRSHWI
Trigger: GATCCAGTGACTCCTGGTCAAACGTCTTATAACATT...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR CCA 72 bp ACTGGCCTTTCTGGGCTTAGACTGCCATTACTTATCTaGCACGCCCCCGAAGTCAGGTTTGAATTCTGCATA +
Preference number: 3 (lower is better)
Translates to: TGLSGLRLPLLI*HAPEVRFEFCI
Trigger: TATGCAGAATTCAAACCTGACTTCGGGGGCGTGCCAGATAAGTAATGGCAGTCTAAGCCCAGAAAGGCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR CAA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACACTACCAAGCAAACTGTaGGTACCCAACCCAGAGCTG +
Preference number: 3 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTLPSKL*VPNPEL
Trigger: CAGCTCTGGGTTGGGTACCAACAGTTTGCTTGGTAG...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR GCA 72 bp CTAAATGGCAGAACTTCGACAAAAGCCCAGGTCTTCTaGTTCCTTGCATGCTACACCAAGTCCCTGTATGAC +
Preference number: 3 (lower is better)
Translates to: LNGRTSTKAQVF*FLACYTKSLYD
Trigger: GTCATACAGGGACTTGGTGTAGCATGCAAGGAAGCAGAAGACCTGGGCTTTTGTCGAAGTTCTGCCATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR GCA 72 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTaGATTCTCACCTTTCTAACCACCTCATTCTCCCCA +
Preference number: 3 (lower is better)
Translates to: SKLLVPNPELSL*ILTFLTTSFSP
Trigger: TGGGGAGAATGAGGTGGTTAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGATGGAGTTCTTACACATaGGCTACGAAAGTGTTTCCC +
Preference number: 3 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRWSSYT*ATKVFP
Trigger: GGGAAACACTTTCGTAGCCAATGTGTAAGAACTCCA...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGAAAAGAATCTTGTCTGTaGAAGATGTCTGGTGGCGTC +
Preference number: 3 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRKESCL*KMSGGV
Trigger: GACGCCACCAGACATCTTCAACAGACAAGATTCTTT...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTCTACCAAGCAAACTGTaGGTACCCAACCCAGAGCTG +
Preference number: 3 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSLPSKL*VPNPEL
Trigger: CAGCTCTGGGTTGGGTACCAACAGTTTGCTTGGTAG...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR GCA 72 bp ATGGCTGCAACAGCAGCTCTGTCACACAAAGAAACGTaGATGGCCATTTCTGTTCAACTTAAGGATCTTCCC +
Preference number: 3 (lower is better)
Translates to: MAATAALSHKET*MAISVQLKDLP
Trigger: GGGAAGATCCTTAAGTTGAACAGAAATGGCCATGCACGTTTCTTTGTGTGACAGAGCTGCTGTTGCAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR CAA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGAGGTCCAAAATGGTTATaGCTGAGTGGGTGTGGCACA +
Preference number: 3 (lower is better)
Translates to: FDQESLDQWPNFHQFRKRGPKWL*LSGCGT
Trigger: TGTGCCACACCCACTCAGCAATAACCATTTTGGACC...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGAGCAGAGCAGATAAACTaGGAAGAATCACTGAATACA +
Preference number: 3 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRAEQIN*EESLNT
Trigger: TGTATTCAGTGATTCTTCCAAGTTTATCTGCTCTGC...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACATTCCCAAGACGTTGTTaGGCTGTTGCCATTCCTTTT +
Preference number: 3 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTFPRRC*AVAIPF
Trigger: AAAAGGAATGGCAACAGCCAAACAACGTCTTGGGAA...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR GCA 72 bp CATAAAAGTATCATAAGGTATAACCTCTGCAGCAGGTaGCAGTCCTGTTGTCCAACAGCAGCAGTACGAAGA +
Preference number: 3 (lower is better)
Translates to: HKSIIRYNLCSR*QSCCPTAAVRR
Trigger: TCTTCGTACTGCTGCTGTTGGACAACAGGACTGGCACCTGCTGCAGAGGTTATACCTTATGATACTTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR GCA 72 bp TCTGCATATACTTTCCATTCTGAAGGCTTGAGCCGCTaGTGTCCACATAATTCCTACTTTGTACCCTCTGAC +
Preference number: 3 (lower is better)
Translates to: SAYTFHSEGLSR*CPHNSYFVPSD
Trigger: GTCAGAGGGTACAAAGTAGGAATTATGTGGACAGCAGCGGCTCAAGCCTTCAGAATGGAAAGTATATGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR CCA 72 bp CTGCAACAGCAGCTCTGTCACACAAAGAAACGTGCATaGCCATTTCTGTTCAACTTAAGGATCTTCCCAAGA +
Preference number: 3 (lower is better)
Translates to: LQQQLCHTKKRA*PFLFNLRIFPR
Trigger: TCTTGGGAAGATCCTTAAGTTGAACAGAAATGGCCATGCACGTTTCTTTGTGTGACAGAGCTGCTGTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR-3UTR CAA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGTGGAGTTCTTACACATaGGCTACGAAAGTGTTTCCC +
Preference number: 3 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMWSSYT*ATKVFP
Trigger: GGGAAACACTTTCGTAGCCAATGTGTAAGAACTCCA...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTCAGGGTTTACACGGGTaGTTTATAGACACTAAGGAT +
Preference number: 3 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRQGLHG*FIDTKD
Trigger: ATCCTTAGTGTCTATAAACAACCCGTGTAAACCCTG...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGTTATCCCATGACATTTaGGAATGGGGACACAAGAAG +
Preference number: 3 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMLSHDI*EWGHKK
Trigger: CTTCTTGTGTCCCCATTCCAAAATGTCATGGGATAA...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGAATGTTATAAGACGTTaGACCAGGAGTCACTGGATC +
Preference number: 3 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMNVIRR*TRSHWI
Trigger: GATCCAGTGACTCCTGGTCAAACGTCTTATAACATT...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGTGCTGTCTTCCTAAGTaGCTGTGTCTGTATGGTATA +
Preference number: 3 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMCCLPK*LCLYGI
Trigger: TATACCATACAGACACAGCAACTTAGGAAGACAGCA...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTGACCACAACTGCAAATaGATGTTCCCCAACAGTACT +
Preference number: 3 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSDHNCK*MFPNST
Trigger: AGTACTGTTGGGGAACATCAATTTGCAGTTGTGGTC...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTAACCCAGAGCTGTCTTaGTGCATTCTCACCTTTCTA +
Preference number: 3 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSNPELS*CILTFL
Trigger: TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTT...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTAACAAGCTCATTGCTTaGGAAATAGACATTTGCTTC +
Preference number: 3 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGNKLIA*EIDICF
Trigger: GAAGCAAATGTCTATTTCCAAAGCAATGAGCTTGTT...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACCCCCGAAGTCAGGTTaGAATTCTGCATATACTTTC +
Preference number: 3 (lower is better)
Translates to: FDQESLDQWPNFHQFRKRPPKSG*NSAYTF
Trigger: GAAAGTATATGCAGAATTCAAACCTGACTTCGGGGG...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR TCA 72 bp GTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTaGGATAAGATGACTCTACCCATCTTTCCACTGGTT +
Preference number: 3 (lower is better)
Translates to: VGESVKPRFLTS*DKMTLPIFPLV
Trigger: AACCAGTGGAAAGATGGGTAGAGTCATCTTATCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTTTAAAGCTGCTCTCTTaGGGACCCAGATATCATCAG +
Preference number: 3 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFLKLLS*GPRYHQ
Trigger: CTGATGATATCTGGGTCCCAAAGAGAGCAGCTTTAA...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTAAGGCAGAAAGAATCTaGTCTGTTGAAGATGTCTGG +
Preference number: 3 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSKAERI*SVEDVW
Trigger: CCAGACATCTTCAACAGACAAGATTCTTTCTGCCTT...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR CCA 72 bp TGTTATAAGACGTTTGACCAGGAGTCACTGGATCAGTaGCCGAATTTTCACCAATTCAGAAAAAGACACATG +
Preference number: 3 (lower is better)
Translates to: CYKTFDQESLDQ*PNFHQFRKRHM
Trigger: CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAACGTCTTATAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR CCA 72 bp GCCAGTAATGTTATAAGACGTTTGACCAGGAGTCACTaGATCAGTGGCCGAATTTTCACCAATTCAGAAAAA +
Preference number: 3 (lower is better)
Translates to: ASNVIRRLTRSH*ISGRIFTNSEK
Trigger: TTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAACGTCTTATAACATTACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR CCA 72 bp AAAAAGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTaGTGGCGTCTCCTTTCCTACACTGGTTTCTTTCTA +
Preference number: 3 (lower is better)
Translates to: KKAERILSVEDV*WRLLSYTGFFL
Trigger: TAGAAAGAAACCAGTGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGAATAACAGTATGCACCTaGGATGTTAGCAAAAGCGAA +
Preference number: 3 (lower is better)
Translates to: FDQESLDQWPNFHQFRKRITVCT*DVSKSE
Trigger: TTCGCTTTTGCTAACATCCAAGGTGCATACTGTTAT...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR-3UTR CAA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAAAAGTTCCCTGGGGAGTaGCTAAGTCATTTTAATTCC +
Preference number: 3 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKKFPGE*LSHFNS
Trigger: GGAATTAAAATGACTTAGCAACTCCCCAGGGAACTT...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR GCA 72 bp ACCACAAAGTTCAGCCATTTCCATGAGATAAAGGGATaGATTATGGCCAGTAATGTTATAAGACGTTTGACC +
Preference number: 3 (lower is better)
Translates to: TTKFSHFHEIKG*IMASNVIRRLT
Trigger: GGTCAAACGTCTTATAACATTACTGGCCATAATGCATCCCTTTATCTCATGGAAATGGCTGAACTTTGTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR GCA 72 bp GGAAATACCATCTGCGAAGATGCATTTCCTGATCAGTaGTATTTCATACCTAACAACTGTATGACTTGCTTT +
Preference number: 3 (lower is better)
Translates to: GNTICEDAFPDQ*YFIPNNCMTCF
Trigger: AAAGCAAGTCATACAGTTGTTAGGTATGAAATAGCACTGATCAGGAAATGCATCTTCGCAGATGGTATTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAGATAGGTGGTGGATTTaGTGCCGGTCTCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSDRWWI*CRSLGG
Trigger: CCCACCAAGAGACCGGCATCAAATCCACCACCTATC...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAAGTGGGCTTCCGGACTaGAAGGACACACATGTCACA +
Preference number: 4 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSSGLPD*KDTHVT
Trigger: TGTGACATGTGTGTCCTTTCAGTCCGGAAGCCCACT...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGCTGCCATTACTTATCTaGCACGCCCCCGAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWLPLLI*HAPEVR
Trigger: CCTGACTTCGGGGGCGTGCCAGATAAGTAATGGCAG...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGGCCATTGTCACACAGTaGGCTTCCGGACTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWAIVTQ*ASGLKG
Trigger: TCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGC...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACAGGTCTCTTGGTGGGGTaGAGGGGCACCGAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTGLLVG*RGTEKE
Trigger: TTCCTTCTCGGTGCCCCTTCACCCCACCAAGAGACC...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCATTGGTCCAGTCACTCTaGACCAGAAAGGCTACTTCA +
Preference number: 4 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSLVQSL*TRKATS
Trigger: TGAAGTAGCCTTTCTGGTTCAGAGTGACTGGACCAA...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGTACTTTTCAGTGCAGTaGACTCGGGTCCGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWYFSVQ*TRVRSL
Trigger: AAGACTCCGGACCCGAGTGCACTGCACTGAAAAGTA...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTAGAAGCTCCAGGCTCCTaGACCCCTAGACTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SKLLVPNPELSLCILTFLEAPGS*TPRLVS
Trigger: GGAGACCAGTCTAGGGGTGCAGGAGCCTGGAGCTTC...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAATAAGGTATAACCTCTaGAGCAGGTGCCAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSIRYNL*SRCQSC
Trigger: ACAGGACTGGCACCTGCTGCAGAGGTTATACCTTAT...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTATGCCGGTCTCTTGGTaGGGTGAAGGGGCACCGAGA +
Preference number: 4 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRMPVSW*GEGAPR
Trigger: TCTCGGTGCCCCTTCACCCCACCAAGAGACCGGCAT...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAATTGCTGAGTGGGTGTaGCACAGTGAAAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSIAEWV*HSENAA
Trigger: TGCTGCATTTTCACTGTGCCACACCCACTCAGCAAT...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CTGTTGTCCAACAGCAGCAGTACGAAGAAGGCCTGCTGTAGTTACAAATGTACTTTCACGTCGTACGGCTaGCGGCACACACAGTACACG +
Preference number: 4 (lower is better)
Translates to: LLSNSSSTKKACCSYKCTFTSYG*RHTQYT
Trigger: CGTGTACTGTGTGTGCCGGCAGCCGTACGACGTGAA...AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACTGCTGCTGTTGGACAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CCA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGTCCCCACAAGTTCCCTaGGGAGTTGCTAAGTCATTT +
Preference number: 4 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWSPQVP*GVAKSF
Trigger: AAATGACTTAGCAACTCCCCAGGGAACTTGTGGGGA...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGACTTGAGCTCAGGAGTTaGAGACCAGTCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRLELRS*RPVWAT
Trigger: TGTTGCCCAGACTGGTCTCCAACTCCTGAGCTCAAG...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472616.1
CDS-3UTR TCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTTCCATTCTGAAGGCTTaGGCCGCTGCTGTCCACATA +
Preference number: 4 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGSILKA*AAAVHI
Trigger: TATGTGGACAGCAGCGGCTCAAGCCTTCAGAATGGA...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCTACTGCCATGGCAGCTaGTGGGATCCTGGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQAYCHGS*WDPGES
Trigger: ACTCTCTCCAGGATCCCAGCAGCTGCCATGGCAGTA...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGTCCCTGAGATTTAACTaGTTTGCCGTTTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWSLRFN*FAVFLL
Trigger: GAGGAGGAAAACGGCAAACCAGTTAAATCTCAGGGA...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGATCATGGTTACTGCCATaGCAGCTGCTGGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: TVWEGRGISQTQIFDILRSWLLP*QLLGSW
Trigger: CCAGGATCCCAGCAGCTGCCATGGCAGTAACCATGA...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp AATCCAGGAGGAAGTCCTCAAGTCTGGATCTTCAGTCTTGACATGGTATCCTGTCTGCCATTACTTATCTaGCACGCCCCCGAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: NPGGSPQVWIFSLDMVSCLPLLI*HAPEVR
Trigger: CCTGACTTCGGGGGCGTGCCAGATAAGTAATGGCAG...ACAGGATACCATGTCAAGACTGAAGATCCAGACTTGAGGACTTCCTCCTGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472616.1
CDS-3UTR TCA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAGTTCAGCCATTTCCATaGGATAAAGGGATGCATTAT +
Preference number: 4 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSVQPFP*DKGMHY
Trigger: ATAATGCATCCCTTTATCTCATGGAAATGGCTGAAC...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCAGTGGGCTTCCGGACTaGAAGGACACACATGTCACA +
Preference number: 4 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQASGLPD*KDTHVT
Trigger: TGTGACATGTGTGTCCTTTCAGTCCGGAAGCCCACT...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACAGGAATAGTGCAACCCTaGCATAGACAGCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTGIVQP*HRQHAL
Trigger: CAGGGCATGCTGTCTATGGCAGGGTTGCACTATTCC...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTGAAGGCTTGAGCCGCTaGTGTCCACATAATTCCTAC +
Preference number: 4 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGEGLSR*CPHNSY
Trigger: GTAGGAATTATGTGGACAGCAGCGGCTCAAGCCTTC...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTAACTATACACACAAACTaGTCCAGGCAGGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: SKLLVPNPELSLCILTFLTIHTN*SRQGDS
Trigger: GCTGTCCCCCTGCCTGGAGCAGTTTGTGTGTATAGT...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CTGTTGTCCAACAGCAGCAGTACGAAGAAGGCCTGCTGTAGTTACAAATGTACTACTATACACACAAACTaGTCCAGGCAGGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: LLSNSSSTKKACCSYKCTTIHTN*SRQGDS
Trigger: GCTGTCCCCCTGCCTGGAGCAGTTTGTGTGTATAGT...AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACTGCTGCTGTTGGACAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTCCAGCTTCCCAAGACTaGTTTAGAGGAAGGTCTAGG +
Preference number: 4 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGPASQD*FRGRSR
Trigger: CCTAGACCTTCCTCTAAAGCAGTCTTGGGAAGCTGG...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGCAGCTTGCACTGGTTTaGAACCATCATCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWQLALV*NHHQFL
Trigger: CAGAAATTGATGATGGTTCCAAACCAGTGCAAGCTG...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCAGGACCTCCCTTGTGTaGAGCTCTAGGATGTCTAGG +
Preference number: 4 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQARTSLV*SSRMSR
Trigger: CCTAGACATCCTAGAGCTCCACACAAGGGAGGTCCT...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTACCTGCACCCCTAGACTaGTCTCCAAAGGGAAGAATG +
Preference number: 4 (lower is better)
Translates to: SKLLVPNPELSLCILTFLPAPLD*SPKGRM
Trigger: CATTCTTCCCTTTGGAGACCAGTCTAGGGGTGCAGG...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGGGAGTTCTTACACATTaGCTACGAAAGTGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWGVLTH*LRKCFP
Trigger: AGGGAAACACTTTCGTAGCCAATGTGTAAGAACTCC...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAATAAGATTCAGACTTTaGTCCAGTCACTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSIRFRL*SSHSEP
Trigger: TGGTTCAGAGTGACTGGACCAAAGTCTGAATCTTAT...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTGCCATTGTCACACAGTaGGCTTCCGGACTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVAIVTQ*ASGLKG
Trigger: TCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGC...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR CAA 72 bp CCAAGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTaGTGCATTCTCACCTTTCTAACCACCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: PSKLLVPNPELS*CILTFLTTSFS
Trigger: GGAGAATGAGGTGGTTAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTAAAAGCCATACAGTCCTaGGAAGTGAGCACAGCATGG +
Preference number: 4 (lower is better)
Translates to: SKLLVPNPELSLCILTFLKAIQS*EVSTAW
Trigger: CCATGCTGTGCTCACTTCTCAGGACTGTATGGCTTT...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR TCA 90 bp ATGTCAAACGAAATGAGAAATGAGGGATCTTTCATGGAGTTCTTACACATTGGCGGTCTCTTGGTGGGGTaGAGGGGCACCGAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: MSNEMRNEGSFMEFLHIGGLLVG*RGTEKE
Trigger: TTCCTTCTCGGTGCCCCTTCACCCCACCAAGAGACC...GCCAATGTGTAAGAACTCCATGAAAGATCCCTCATTTCTCATTTCGTTTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCATCTTTACCCTACCACTaGAAATACATCAAGACACTA +
Preference number: 4 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSSLPYH*KYIKTL
Trigger: TAGTGTCTTGATGTATTTTCAGTGGTAGGGTAAAGA...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTTGGGTCATCACAAAATaGTGGGGAGTGCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVWVITK*WGVQRE
Trigger: TTCCCTCTGCACTCCCCATCATTTTGTGATGACCCA...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp AATCCAGGAGGAAGTCCTCAAGTCTGGATCTTCAGTCTTGACATGGTATCCTGTTGGGTCATCACAAAATaGTGGGGAGTGCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: NPGGSPQVWIFSLDMVSCWVITK*WGVQRE
Trigger: TTCCCTCTGCACTCCCCATCATTTTGTGATGACCCA...ACAGGATACCATGTCAAGACTGAAGATCCAGACTTGAGGACTTCCTCCTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472616.1
CDS-3UTR TCA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAACTTGGAAGAATCACTaGATACAGTTTCGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSTWKNH*IQFRKV
Trigger: AACCTTTCGAAACTGTATTCAGTGATTCTTCCAAGT...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGAAGAAATGGCCAAAATaGAACTGGTTGGAGACAAGT +
Preference number: 4 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWKKWPK*NWLETS
Trigger: ACTTGTCTCCAACCAGTTTCATTTTGGCCATTTCTT...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGATGTGAAGTGTCATTTTaGTGTCTGCCTGCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: TVWEGRGISQTQIFDILRCEVSF*CLPASP
Trigger: TGGCGAGGCAGGCAGACAGCAAAATGACACTTCACA...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR GCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACTACTGCCATGGCAGCTaGTGGGATCCTGGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHYCHGS*WDPGES
Trigger: ACTCTCTCCAGGATCCCAGCAGCTGCCATGGCAGTA...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGATTCTATTCAAGTGGAAGCTCCAGGCTCCTaGACCCCTAGACTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: QWPNFHQFRKRHMDSIQVEAPGS*TPRLVS
Trigger: GGAGACCAGTCTAGGGGTGCAGGAGCCTGGAGCTTC...CACTTGAATAGAATCCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGAACCTCTGCAGCAGGTaGCAGTCCTGTTGTCCAACA +
Preference number: 4 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMNLCSR*QSCCPT
Trigger: TGTTGGACAACAGGACTGGCACCTGCTGCAGAGGTT...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACAACTTGGGAACATTTCTaGCCCACCCCCAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTTWEHF*PTPRNH
Trigger: GTGATTTCTGGGGGTGGGGCAGAAATGTTCCCAAGT...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGACCAGAGCTGTCTTTGTaGATTCTCACCTTTCTAACC +
Preference number: 4 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRPELSL*ILTFLT
Trigger: GGTTAGAAAGGTGAGAATGCACAAAGACAGCTCTGG...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGGAAGGAAATACCATCTaGGAAGATGCATTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWEGNTI*EDAFPD
Trigger: ATCAGGAAATGCATCTTCGCAGATGGTATTTCCTTC...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTACTGTACACTTTCCCTaGCTGCAGGCAAAAGATGGG +
Preference number: 4 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVTVHFP*LQAKDG
Trigger: CCCATCTTTTGCCTGCAGGCAGGGAAAGTGTACAGT...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTACTGTACACTTTCCCTaGCTGCAGGCAAAAGATGGG +
Preference number: 4 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRTVHFP*LQAKDG
Trigger: CCCATCTTTTGCCTGCAGGCAGGGAAAGTGTACAGT...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAAATTTCACTTCTAGATaGCTTCTGGCTCTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSNFTSR*LLALLK
Trigger: CTTCAAAAGAGCCAGAAGCCATCTAGAAGTGAAATT...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCCAGCTGCTGGGATCCTaGAGAGAGTTTCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQAQLLGS*REFLSP
Trigger: TGGTGAAAGAAACTCTCTCCAGGATCCCAGCAGCTG...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGATGCCATGGCAGCTGCTaGGATCCTGGAGAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: FDQESLDQWPNFHQFRKRCHGSC*DPGESF
Trigger: GAAACTCTCTCCAGGATCCCAGCAGCTGCCATGGCA...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGAGGAAGTCCTCAAGTCTaGATCTTCAGTCTTGACATG +
Preference number: 4 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRGSPQV*IFSLDM
Trigger: CATGTCAAGACTGAAGATCCAGACTTGAGGACTTCC...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGATTCTATTCAAGTGATGCCGGTCTCTTGGTaGGGTGAAGGGGCACCGAGA +
Preference number: 4 (lower is better)
Translates to: QWPNFHQFRKRHMDSIQVMPVSW*GEGAPR
Trigger: TCTCGGTGCCCCTTCACCCCACCAAGAGACCGGCAT...CACTTGAATAGAATCCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAATTGATGCCGGTCTCTTaGTGGGGTGAAGGGGCACCG +
Preference number: 4 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKLMPVS*WGEGAP
Trigger: CGGTGCCCCTTCACCCCACCAAGAGACCGGCATCAA...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp ATGTCAAACGAAATGAGAAATGAGGGATCTTTCATGGAGTTCTTACACATTGGCTTGATGCCGGTCTCTTaGTGGGGTGAAGGGGCACCG +
Preference number: 4 (lower is better)
Translates to: MSNEMRNEGSFMEFLHIGLMPVS*WGEGAP
Trigger: CGGTGCCCCTTCACCCCACCAAGAGACCGGCATCAA...GCCAATGTGTAAGAACTCCATGAAAGATCCCTCATTTCTCATTTCGTTTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCACATGACATTTTGGAATaGGGACACAAGAAGTATTTC +
Preference number: 4 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSHDILE*GHKKYF
Trigger: GAAATACTTCTTGTGTCCCCATTCCAAAATGTCATG...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGATACTGCTAATTTCCTaGAGAAGATACCTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWILLIS*RRYLQG
Trigger: CCCTTGAAGGTATCTTCTCCAGGAAATTAGCAGTAT...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTTACCAAGCAAACTGTTaGTACCCAACCCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGYQANC*YPTQSC
Trigger: ACAGCTCTGGGTTGGGTACCAACAGTTTGCTTGGTA...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTGGGTCCGGAGTCTTCTaGCTCAGAAATATCAGAATA +
Preference number: 4 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGGSGVF*LRNIRI
Trigger: TATTCTGATATTTCTGAGTCAGAAGACTCCGGACCC...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTAGGCTTCTGGCTCTTTTaGAGGAAGTTCCTCATCACA +
Preference number: 4 (lower is better)
Translates to: SKLLVPNPELSLCILTFLGFWLF*RKFLIT
Trigger: TGTGATGAGGAACTTCCTTCAAAAGAGCCAGAAGCC...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGAATAGACAGCATGCCCTaGATAGCTTCTTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TVWEGRGISQTQIFDILRIDSMP*IASSSV
Trigger: CACAGAGGAAGAAGCTATTCAGGGCATGCTGTCTAT...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCCATTCTGAAGGCTTaGGCCGCTGCTGTCCACATA +
Preference number: 4 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSSILKA*AAAVHI
Trigger: TATGTGGACAGCAGCGGCTCAAGCCTTCAGAATGGA...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACATTGGTCCAGTCACTCTaGACCAGAAAGGCTACTTCA +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTLVQSL*TRKATS
Trigger: TGAAGTAGCCTTTCTGGTTCAGAGTGACTGGACCAA...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGATCAAGGTTACACAGCTaGTACCTAAATGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRSRLHS*YLNGRT
Trigger: AGTTCTGCCATTTAGGTATCAGCTGTGTAACCTTGA...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTCACCACCAAGACTGGTaGGCTCTAGCTTCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVHHQDW*ALASLY
Trigger: ATAAAGAGAAGCTAGAGCTCACCAGTCTTGGTGGTG...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGATTTCAAGGAAGCACATaGACATCATCTCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRFQGST*TSSHRA
Trigger: TGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAA...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTATTTTGCTGTCTGCCTaGCTCGCCACATCAATGACA +
Preference number: 4 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRILLSA*LATSMT
Trigger: TGTCATTGATGTGGCGAGGCAGGCAGACAGCAAAAT...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR GCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCTGTCATTTTGCTGTCTaGCTGCCTCGCCACATCAAT +
Preference number: 4 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQACHFAV*LPRHIN
Trigger: ATTGATGTGGCGAGGCAGGCAGACAGCAAAATGACA...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR GCA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGTACTTTTCAGTGCAGTaGACTCGGGTCCGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMYFSVQ*TRVRSL
Trigger: AAGACTCCGGACCCGAGTGCACTGCACTGAAAAGTA...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGAAAAGATACTTTTCAGTaGAGTGCACTCGGGTCCGGA +
Preference number: 4 (lower is better)
Translates to: TVWEGRGISQTQIFDILRKDTFQ*SALGSG
Trigger: TCCGGACCCGAGTGCACTGCACTGAAAAGTATCTTT...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGGTCTTCTGCTTCCTTaGATGCTACACCAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMGLLLP*MLHQVP
Trigger: AGGGACTTGGTGTAGCATGCAAGGAAGCAGAAGACC...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCGCCTTTGTAAACACGTaGAATAGTGCAACCCTGCCA +
Preference number: 4 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQAAFVNT*NSATLP
Trigger: TGGCAGGGTTGCACTATTCCACGTGTTTACAAAGGC...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGAACTGCCTAACCTCATaGTTACTGCCATGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMNCLTS*LLPWQL
Trigger: CAGCTGCCATGGCAGTAACCATGAGGTTAGGCAGTT...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTGAGTCACTGGATCAGTaGCCGAATTTTCACCAATTC +
Preference number: 4 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGESLDQ*PNFHQF
Trigger: GAATTGGTGAAAATTCGGCCACTGATCCAGTGACTC...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACATTGACCAGGAGTCACTaGATCAGTGGCCGAATTTTC +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTLTRSH*ISGRIF
Trigger: GAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAA...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTTCCCCACAAGTTCCCTaGGGAGTTGCTAAGTCATTT +
Preference number: 4 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVSPQVP*GVAKSF
Trigger: AAATGACTTAGCAACTCCCCAGGGAACTTGTGGGGA...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTTACCAAGCAAACTGTTaGTACCCAACCCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVYQANC*YPTQSC
Trigger: ACAGCTCTGGGTTGGGTACCAACAGTTTGCTTGGTA...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp AATCCAGGAGGAAGTCCTCAAGTCTGGATCTTCAGTCTTGACATGGTATCCTGTTCTGTTGAAGATGTCTaGTGGCGTCTCCTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: NPGGSPQVWIFSLDMVSCSVEDV*WRLLSY
Trigger: GTAGGAAAGGAGACGCCACCAGACATCTTCAACAGA...ACAGGATACCATGTCAAGACTGAAGATCCAGACTTGAGGACTTCCTCCTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472616.1
CDS-3UTR TCA 90 bp CTGTTGTCCAACAGCAGCAGTACGAAGAAGGCCTGCTGTAGTTACAAATGTACTGGAGTTCGGACATTATaGTCTCGAAGTTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: LLSNSSSTKKACCSYKCTGVRTL*SRSFLI
Trigger: GATGAGGAAACTTCGAGATCATAATGTCCGAACTCC...AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACTGCTGCTGTTGGACAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACAACATCTCTAATCTTTTaGGGACCTCCCTTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTTSLIF*GPPLCG
Trigger: TCCACACAAGGGAGGTCCTCAAAAGATTAGAGATGT...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CTGTTGTCCAACAGCAGCAGTACGAAGAAGGCCTGCTGTAGTTACAAATGTACTGGGTCCGGAGTCTTCTaGCTCAGAAATATCAGAATA +
Preference number: 4 (lower is better)
Translates to: LLSNSSSTKKACCSYKCTGSGVF*LRNIRI
Trigger: TATTCTGATATTTCTGAGTCAGAAGACTCCGGACCC...AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACTGCTGCTGTTGGACAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGACTGGATCTTCAGTCTTaGCATGGTATCCACATTCCA +
Preference number: 4 (lower is better)
Translates to: TVWEGRGISQTQIFDILRLDLQS*HGIHIP
Trigger: TGGAATGTGGATACCATGTCAAGACTGAAGATCCAG...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR TCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTCCCCGAAGTCAGGTTTaGATTCTGCATATACTTTCC +
Preference number: 4 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRPRSQV*ILHILS
Trigger: GGAAAGTATATGCAGAATTCAAACCTGACTTCGGGG...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp AATCCAGGAGGAAGTCCTCAAGTCTGGATCTTCAGTCTTGACATGGTATCCTGTCCCCGAAGTCAGGTTTaGATTCTGCATATACTTTCC +
Preference number: 4 (lower is better)
Translates to: NPGGSPQVWIFSLDMVSCPRSQV*ILHILS
Trigger: GGAAAGTATATGCAGAATTCAAACCTGACTTCGGGG...ACAGGATACCATGTCAAGACTGAAGATCCAGACTTGAGGACTTCCTCCTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472616.1
CDS-3UTR TCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGAGTTCTATTACCTCGCTaGAAGTTTTCTAACTTAGCC +
Preference number: 4 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRVLLPR*KFSNLA
Trigger: GGCTAAGTTAGAAAACTTTCAGCGAGGTAATAGAAC...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTTGGGCTTGTTTCCTCTaGGTTTATGATTTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGWACFL*VYDFSQ
Trigger: CTGACTGAAATCATAAACTCAGAGGAAACAAGCCCA...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACAGTTCTAGTTCCAGCTTaGACTGGTTTGGAACCATCA +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTVLVPA*TGLEPS
Trigger: TGATGGTTCCAAACCAGTGCAAGCTGGAACTAGAAC...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR GCA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGGTTTTCCTCCTCTATTaGTCGAATTACTTTAGAAAG +
Preference number: 4 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWVFLLY*SNYFRK
Trigger: CTTTCTAAAGTAATTCGAGCAATAGAGGAGGAAAAC...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGAGAAGGCTTGAGCCGCTaGTGTCCACATAATTCCTAC +
Preference number: 4 (lower is better)
Translates to: FDQESLDQWPNFHQFRKREGLSR*CPHNSY
Trigger: GTAGGAATTATGTGGACAGCAGCGGCTCAAGCCTTC...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTTTTCTGGGCTTAGACTaGCATTACTTATCTGGCACG +
Preference number: 4 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRFLGLD*HYLSGT
Trigger: CGTGCCAGATAAGTAATGGCAGTCTAAGCCCAGAAA...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCTTTCTGGGCTTAGACTaGCATTACTTATCTGGCACG +
Preference number: 4 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQAFLGLD*HYLSGT
Trigger: CGTGCCAGATAAGTAATGGCAGTCTAAGCCCAGAAA...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CTGTTGTCCAACAGCAGCAGTACGAAGAAGGCCTGCTGTAGTTACAAATGTACTACGTTTACCTTTTGTTaGCTGGTTGCTGATAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLSNSSSTKKACCSYKCTTFTFC*LVADRW
Trigger: CCACCTATCAGCAACCAGGCAACAAAAGGTAAACGT...AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACTGCTGCTGTTGGACAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACACTTGGGAACATTTCTaGCCCACCCCCAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHTWEHF*PTPRNH
Trigger: GTGATTTCTGGGGGTGGGGCAGAAATGTTCCCAAGT...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTAAAGCCCAGGTCTTCTaGTTCCTTGCATGCTACACC +
Preference number: 4 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSKAQVF*FLACYT
Trigger: GGTGTAGCATGCAAGGAAGCAGAAGACCTGGGCTTT...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CTGTTGTCCAACAGCAGCAGTACGAAGAAGGCCTGCTGTAGTTACAAATGTACTCCAGAGCTGTCTTTGTaGATTCTCACCTTTCTAACC +
Preference number: 4 (lower is better)
Translates to: LLSNSSSTKKACCSYKCTPELSL*ILTFLT
Trigger: GGTTAGAAAGGTGAGAATGCACAAAGACAGCTCTGG...AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACTGCTGCTGTTGGACAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTAGGACCTCCCTTGTGTaGAGCTCTAGGATGTCTAGG +
Preference number: 4 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFRTSLV*SSRMSR
Trigger: CCTAGACATCCTAGAGCTCCACACAAGGGAGGTCCT...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAATGCCATGGCAGCTGCTaGGATCCTGGAGAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKCHGSC*DPGESF
Trigger: GAAACTCTCTCCAGGATCCCAGCAGCTGCCATGGCA...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGATTCTATTCAAGTGTCATGGTTACTGCCATaGCAGCTGCTGGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: QWPNFHQFRKRHMDSIQVSWLLP*QLLGSW
Trigger: CCAGGATCCCAGCAGCTGCCATGGCAGTAACCATGA...CACTTGAATAGAATCCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTAGGAAGTCCTCAAGTCTaGATCTTCAGTCTTGACATG +
Preference number: 4 (lower is better)
Translates to: SKLLVPNPELSLCILTFLGSPQV*IFSLDM
Trigger: CATGTCAAGACTGAAGATCCAGACTTGAGGACTTCC...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTTTACCTTTTGTTGCCTaGTTGCTGATAGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRLPFVA*LLIGGG
Trigger: TCCACCACCTATCAGCAACCAGGCAACAAAAGGTAA...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTATGGTTATTGCTGAGTaGGTGTGGCACAGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGMVIAE*VWHSEN
Trigger: ATTTTCACTGTGCCACACCCACTCAGCAATAACCAT...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGTTGACCAGGAGTCACTaGATCAGTGGCCGAATTTTC +
Preference number: 4 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMLTRSH*ISGRIF
Trigger: GAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAA...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGAAATCCAGCACCTTGTTaGAGATTCCTCGGATTTTTA +
Preference number: 4 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRNPAPC*RFLGFL
Trigger: TAAAAATCCGAGGAATCTCCAACAAGGTGCTGGATT...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGAAGTATGCTGAATCTGTaGGGATGGTACTTTCCTAAT +
Preference number: 4 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRSMLNL*GWYFPN
Trigger: ATTAGGAAAGTACCATCCCCACAGATTCAGCATACT...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGATCTTCAGTCTTGACATaGTATCCTGTAATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRSSVLT*YPVISA
Trigger: TGCTGAGATTACAGGATACCATGTCAAGACTGAAGA...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472616.1
3UTR CAA 72 bp ATCCAGGAGGAAGTCCTCAAGTCTGGATCTTCAGTCTaGACATGGTATCCTGTAATCTCAGCACTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: IQEEVLKSGSSV*TWYPVISALWE
Trigger: TTCCCAAAGTGCTGAGATTACAGGATACCATGTCAAGACTGAAGATCCAGACTTGAGGACTTCCTCCTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472616.1
CDS-3UTR TCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACGCCTCGCCACATCAATaGCATCTATCACTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHASPHQ*HLSLCH
Trigger: GTGACAAAGTGATAGATGTCATTGATGTGGCGAGGC...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR TCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCTGGCTTGGGAAAGACTaGATCATCTGGCCAATAATT +
Preference number: 4 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQAWLGKD*IIWPII
Trigger: AATTATTGGCCAGATGATTCAGTCTTTCCCAAGCCA...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR TCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACAATGAACCTTCCTTTCTaGTGCATTTCTGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTMNLPF*CISGFY
Trigger: GTAGAAGCCAGAAATGCATCAGAAAGGAAGGTTCAT...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGAGTATTTCTAGGATACTaGACTACTACAAACTGCCAA +
Preference number: 4 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRVFLGY*TTTNCQ
Trigger: TTGGCAGTTTGTAGTAGTTCAGTATCCTAGAAATAC...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTATGGGCTTGTTTCCTCTaGGTTTATGATTTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: SKLLVPNPELSLCILTFLWACFL*VYDFSQ
Trigger: CTGACTGAAATCATAAACTCAGAGGAAACAAGCCCA...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTAACCACAACTGCAAATTaGTGTTCCCCAACAGTACTA +
Preference number: 4 (lower is better)
Translates to: SKLLVPNPELSLCILTFLTTTAN*CSPTVL
Trigger: TAGTACTGTTGGGGAACATCAATTTGCAGTTGTGGT...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCACCACAACTGCAAATTaGTGTTCCCCAACAGTACTA +
Preference number: 4 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQATTTAN*CSPTVL
Trigger: TAGTACTGTTGGGGAACATCAATTTGCAGTTGTGGT...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CTGTTGTCCAACAGCAGCAGTACGAAGAAGGCCTGCTGTAGTTACAAATGTACTTCAAGGTTACACAGCTaGTACCTAAATGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: LLSNSSSTKKACCSYKCTSRLHS*YLNGRT
Trigger: AGTTCTGCCATTTAGGTATCAGCTGTGTAACCTTGA...AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACTGCTGCTGTTGGACAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTTTTCAAGGAAGCACATaGACATCATCTCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRFQGST*TSSHRA
Trigger: TGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAA...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTCGAAGATGCATTTCCTaGTCAGTGCTATTTCATACC +
Preference number: 4 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVRRCIS*SVLFHT
Trigger: GGTATGAAATAGCACTGATCAGGAAATGCATCTTCG...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGACGTTTACCTTTTGTTaGCTGGTTGCTGATAGGTGG +
Preference number: 4 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMTFTFC*LVADRW
Trigger: CCACCTATCAGCAACCAGGCAACAAAAGGTAAACGT...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGCTAAATGCTATCAGTaGTGTCTTCCTAAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRAKCYQ*CLPKLL
Trigger: CAGCAACTTAGGAAGACAGCACTGATAGCATTTAGC...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTGAACAGGTCCTCTTTTaGTCATGTTTGCTTAGAAGT +
Preference number: 4 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGEQVLF*SCLLRS
Trigger: ACTTCTAAGCAAACATGAGCAAAAGAGGACCTGTTC...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGAGTGTCACAGGTCTTaGATAGGTAAACTACTTGGA +
Preference number: 4 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRECHRS*IGKLLG
Trigger: TCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCGAGTGTCACAGGTCTTaGATAGGTAAACTACTTGGA +
Preference number: 4 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQAECHRS*IGKLLG
Trigger: TCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTAGAATCAGCAAAGAAATaGTCTTCAAGCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: SKLLVPNPELSLCILTFLESAKK*SSSFST
Trigger: GGTGCTGAAGCTTGAAGAGCATTTCTTTGCTGATTC...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp AATCCAGGAGGAAGTCCTCAAGTCTGGATCTTCAGTCTTGACATGGTATCCTGTGAATCAGCAAAGAAATaGTCTTCAAGCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: NPGGSPQVWIFSLDMVSCESAKK*SSSFST
Trigger: GGTGCTGAAGCTTGAAGAGCATTTCTTTGCTGATTC...ACAGGATACCATGTCAAGACTGAAGATCCAGACTTGAGGACTTCCTCCTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGATTTCCAGCAAGTTTTTaGCTACAAACCAACATATGG +
Preference number: 4 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRFPASF*LQTNIW
Trigger: CCATATGTTGGTTTGTAGCCAAAAACTTGCTGGAAA...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACAATCTTTCTTCGGGAATaGTATGGGGAAGTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTIFLRE*YGEVAS
Trigger: TGAAGCAACTTCCCCATACCATTCCCGAAGAAAGAT...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp AATCCAGGAGGAAGTCCTCAAGTCTGGATCTTCAGTCTTGACATGGTATCCTGTATCTTTCTTCGGGAATaGTATGGGGAAGTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: NPGGSPQVWIFSLDMVSCIFLRE*YGEVAS
Trigger: TGAAGCAACTTCCCCATACCATTCCCGAAGAAAGAT...ACAGGATACCATGTCAAGACTGAAGATCCAGACTTGAGGACTTCCTCCTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGAACTGTGGAGGATGGTTaGAGATGTTTGTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRTVEDG*RCLLNF
Trigger: AAAATTCAACAAACATCTCCAACCATCCTCCACAGT...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTGCCTTTGTAAACACGTaGAATAGTGCAACCCTGCCA +
Preference number: 4 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSAFVNT*NSATLP
Trigger: TGGCAGGGTTGCACTATTCCACGTGTTTACAAAGGC...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGAGTATCCACATTCCACTaGTTTATCATAGCGATACAA +
Preference number: 4 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRVSTFH*FIIAIQ
Trigger: TTGTATCGCTATGATAAACCAGTGGAATGTGGATAC...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CCA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGATCTTCAGTCTTGACATaGTATCCACATTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: TVWEGRGISQTQIFDILRSSVLT*YPHSTG
Trigger: ACCAGTGGAATGTGGATACCATGTCAAGACTGAAGA...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCTCCCAAGACGTTGTTTaGCTGTTGCCATTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQASQDVV*LLPFLF
Trigger: AAAAAGGAATGGCAACAGCCAAACAACGTCTTGGGA...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACATTGCTGAGTGGGTGTaGCACAGTGAAAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHIAEWV*HSENAA
Trigger: TGCTGCATTTTCACTGTGCCACACCCACTCAGCAAT...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTATGGTTATTGCTGAGTaGGTGTGGCACAGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRMVIAE*VWHSEN
Trigger: ATTTTCACTGTGCCACACCCACTCAGCAATAACCAT...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACCCACCAGGTCCAAAATaGTTATTGCTGAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHPPGPK*LLLSGC
Trigger: ACACCCACTCAGCAATAACCATTTTGGACCTGGTGG...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACCTCTATTGTCAGACTTaGGAACATTTCTGCCCCACC +
Preference number: 4 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHLYCQT*EHFCPT
Trigger: GGTGGGGCAGAAATGTTCCCAAGTCTGACAATAGAG...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGATCTTTCCACTGGTTTTaGCATAGTGTAGACAGGGTT +
Preference number: 4 (lower is better)
Translates to: TVWEGRGISQTQIFDILRSFHWF*HSVDRV
Trigger: AACCCTGTCTACACTATGCCAAAACCAGTGGAAAGA...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGTTGTCCAACAGCAGCAGTACGAAGAAGGCCTGCTGTAGTTACAAATGTACTTACCCATCTTTCCACTaGTTTTGGCATAGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: LLSNSSSTKKACCSYKCTYPSFH*FWHSVD
Trigger: GTCTACACTATGCCAAAACCAGTGGAAAGATGGGTA...AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACTGCTGCTGTTGGACAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTATACCCATCTTTCCACTaGTTTTGGCATAGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: SKLLVPNPELSLCILTFLYPSFH*FWHSVD
Trigger: GTCTACACTATGCCAAAACCAGTGGAAAGATGGGTA...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTAGCCTAAGGACACAGTaGATACTGGCCACAATTTTA +
Preference number: 4 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVSLRTQ*ILATIL
Trigger: TAAAATTGTGGCCAGTATCCACTGTGTCCTTAGGCT...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACAAGCCTAAGGACACAGTaGATACTGGCCACAATTTTA +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTSLRTQ*ILATIL
Trigger: TAAAATTGTGGCCAGTATCCACTGTGTCCTTAGGCT...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTAGTATGCTGAATCTGTaGGGATGGTACTTTCCTAAT +
Preference number: 4 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGSMLNL*GWYFPN
Trigger: ATTAGGAAAGTACCATCCCCACAGATTCAGCATACT...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCTGTTGAAGATGTCTaGTGGCGTCTCCTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSSVEDV*WRLLSY
Trigger: GTAGGAAAGGAGACGCCACCAGACATCTTCAACAGA...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTTCCCTGACTGTAATGTaGAAGTTATACGTAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVSLTVM*KLYVAL
Trigger: CAGAGCTACGTATAACTTCCACATTACAGTCAGGGA...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR CAA 72 bp AAGGGATGCATTATGGCCAGTAATGTTATAAGACGTTaGACCAGGAGTCACTGGATCAGTGGCCGAATTTTC +
Preference number: 4 (lower is better)
Translates to: KGCIMASNVIRR*TRSHWISGRIF
Trigger: GAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAACGTCTTATAACATTACTGGCCATAATGCATCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR CAA 72 bp TGCAGAGAGCATCTTTTGAAAAAGGCAGAAAGAATCTaGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: CREHLLKKAERI*SVEDVWWRLLS
Trigger: GGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCTTTTTCAAAAGATGCTCTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTACATCTCTAATCTTTTaGGGACCTCCCTTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSTSLIF*GPPLCG
Trigger: TCCACACAAGGGAGGTCCTCAAAAGATTAGAGATGT...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp AATCCAGGAGGAAGTCCTCAAGTCTGGATCTTCAGTCTTGACATGGTATCCTGTCTACTTTGTACCCTCTaGCTAATTTCTGATGAACCT +
Preference number: 4 (lower is better)
Translates to: NPGGSPQVWIFSLDMVSCLLCTL*LISDEP
Trigger: AGGTTCATCAGAAATTAGTCAGAGGGTACAAAGTAG...ACAGGATACCATGTCAAGACTGAAGATCCAGACTTGAGGACTTCCTCCTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472616.1
CDS-3UTR TCA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGATAAAATTCAAGCCCTaGCAAGAGACCCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMIKFKP*QETLSS
Trigger: ACTGGAAAGGGTCTCTTGTCAGGGCTTGAATTTTAT...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACAAGATTTTTGACATCCTaGGATAAGATGACTCTACCC +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTRFLTS*DKMTLP
Trigger: GGGTAGAGTCATCTTATCTCAGGATGTCAAAAATCT...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTGTTCAGCCATTTCCATaGGATAAAGGGATGCATTAT +
Preference number: 4 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVVQPFP*DKGMHY
Trigger: ATAATGCATCCCTTTATCTCATGGAAATGGCTGAAC...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTACCTCTTTCCACAGCATaGAACTGTTATGGCTTAATT +
Preference number: 4 (lower is better)
Translates to: SKLLVPNPELSLCILTFLPLSTA*NCYGLI
Trigger: AATTAAGCCATAACAGTTTCATGCTGTGGAAAGAGG...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTAATAAAGACTTTGATCTaGAAAGGGCTGCCTTTCATC +
Preference number: 4 (lower is better)
Translates to: SKLLVPNPELSLCILTFLIKTLI*KGLPFI
Trigger: GATGAAAGGCAGCCCTTTGCAGATCAAAGTCTTTAT...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp AATCCAGGAGGAAGTCCTCAAGTCTGGATCTTCAGTCTTGACATGGTATCCTGTATAAAGACTTTGATCTaGAAAGGGCTGCCTTTCATC +
Preference number: 4 (lower is better)
Translates to: NPGGSPQVWIFSLDMVSCIKTLI*KGLPFI
Trigger: GATGAAAGGCAGCCCTTTGCAGATCAAAGTCTTTAT...ACAGGATACCATGTCAAGACTGAAGATCCAGACTTGAGGACTTCCTCCTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472616.1
CDS-3UTR GCA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTAAAGATACTTTTCAGTaGAGTGCACTCGGGTCCGGA +
Preference number: 4 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFKDTFQ*SALGSG
Trigger: TCCGGACCCGAGTGCACTGCACTGAAAAGTATCTTT...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTATCACACAAAGAAACGTaGATGGCCATTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: SKLLVPNPELSLCILTFLSHKET*MAISVQ
Trigger: TTGAACAGAAATGGCCATGCACGTTTCTTTGTGTGA...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACAAGTACGAAGAAGGCCTaGTGTAGTTACAAATGTACT +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTSTKKA*CSYKCT
Trigger: AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACT...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CTGTTGTCCAACAGCAGCAGTACGAAGAAGGCCTGCTGTAGTTACAAATGTACTAGTACGAAGAAGGCCTaGTGTAGTTACAAATGTACT +
Preference number: 4 (lower is better)
Translates to: LLSNSSSTKKACCSYKCTSTKKA*CSYKCT
Trigger: AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACT...AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACTGCTGCTGTTGGACAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGAACAGGTCCTCTTTTaGTCATGTTTGCTTAGAAGT +
Preference number: 4 (lower is better)
Translates to: SECHRSCIGKLLGDQGLREQVLF*SCLLRS
Trigger: ACTTCTAAGCAAACATGAGCAAAAGAGGACCTGTTC...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGATTCTATTCAAGTGGGTCTTCTGCTTCCTTaGATGCTACACCAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: QWPNFHQFRKRHMDSIQVGLLLP*MLHQVP
Trigger: AGGGACTTGGTGTAGCATGCAAGGAAGCAGAAGACC...CACTTGAATAGAATCCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp ATGTCAAACGAAATGAGAAATGAGGGATCTTTCATGGAGTTCTTACACATTGGCAAAGCCCAGGTCTTCTaGTTCCTTGCATGCTACACC +
Preference number: 4 (lower is better)
Translates to: MSNEMRNEGSFMEFLHIGKAQVF*FLACYT
Trigger: GGTGTAGCATGCAAGGAAGCAGAAGACCTGGGCTTT...GCCAATGTGTAAGAACTCCATGAAAGATCCCTCATTTCTCATTTCGTTTGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp ATGTCAAACGAAATGAGAAATGAGGGATCTTTCATGGAGTTCTTACACATTGGCCCAGCTTCCCAAGACTaGTTTAGAGGAAGGTCTAGG +
Preference number: 4 (lower is better)
Translates to: MSNEMRNEGSFMEFLHIGPASQD*FRGRSR
Trigger: CCTAGACCTTCCTCTAAAGCAGTCTTGGGAAGCTGG...GCCAATGTGTAAGAACTCCATGAAAGATCCCTCATTTCTCATTTCGTTTGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACAGAAGGAAATACCATCTaGGAAGATGCATTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTEGNTI*EDAFPD
Trigger: ATCAGGAAATGCATCTTCGCAGATGGTATTTCCTTC...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTTATCTTTGTGTCAGCTaGCTGCCATGCATCTTTATA +
Preference number: 4 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRYLCVS*LPCIFI
Trigger: TATAAAGATGCATGGCAGCCAGCTGACACAAAGATA...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CCA 90 bp CAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGATTCTATTCAAGTGTCACCCCAGAGGACATaGTACCAGACTGAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: QWPNFHQFRKRHMDSIQVSPQRT*YQTEVP
Trigger: TGGAACTTCAGTCTGGTACCATGTCCTCTGGGGTGA...CACTTGAATAGAATCCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACTCCCTGAGATTTAACTaGTTTGCCGTTTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHSLRFN*FAVFLL
Trigger: GAGGAGGAAAACGGCAAACCAGTTAAATCTCAGGGA...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAACAGCTGCTGGGATCCTaGAGAGAGTTTCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKQLLGS*REFLSP
Trigger: TGGTGAAAGAAACTCTCTCCAGGATCCCAGCAGCTG...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAAAACTGCCTAACCTCATaGTTACTGCCATGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKNCLTS*LLPWQL
Trigger: CAGCTGCCATGGCAGTAACCATGAGGTTAGGCAGTT...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTTACCTTTTGTTGCCTaGTTGCTGATAGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSLPFVA*LLIGGG
Trigger: TCCACCACCTATCAGCAACCAGGCAACAAAAGGTAA...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTACAAAGAAACGTGCATaGCCATTTCTGTTCAACTTA +
Preference number: 4 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGTKKRA*PFLFNL
Trigger: TAAGTTGAACAGAAATGGCCATGCACGTTTCTTTGT...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCTATCCCATGACATTTTaGAATGGGGACACAAGAAGT +
Preference number: 4 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQAYPMTF*NGDTRS
Trigger: ACTTCTTGTGTCCCCATTCCAAAATGTCATGGGATA...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACATATCCCATGACATTTTaGAATGGGGACACAAGAAGT +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTYPMTF*NGDTRS
Trigger: ACTTCTTGTGTCCCCATTCCAAAATGTCATGGGATA...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGTTGTCCAACAGCAGCAGTACGAAGAAGGCCTGCTGTAGTTACAAATGTACTATAAGATTCAGACTTTaGTCCAGTCACTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: LLSNSSSTKKACCSYKCTIRFRL*SSHSEP
Trigger: TGGTTCAGAGTGACTGGACCAAAGTCTGAATCTTAT...AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACTGCTGCTGTTGGACAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGAGAGTCACTGGATCAGTaGCCGAATTTTCACCAATTC +
Preference number: 4 (lower is better)
Translates to: FDQESLDQWPNFHQFRKRESLDQ*PNFHQF
Trigger: GAATTGGTGAAAATTCGGCCACTGATCCAGTGACTC...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGAAATCCAGCACCTTGTTaGAGATTCCTCGGATTTTTA +
Preference number: 4 (lower is better)
Translates to: TVWEGRGISQTQIFDILRNPAPC*RFLGFL
Trigger: TAAAAATCCGAGGAATCTCCAACAAGGTGCTGGATT...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTCTGAATCTGTGGGGATaGTACTTTCCTAATTCTTCA +
Preference number: 4 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRLNLWG*YFPNSS
Trigger: TGAAGAATTAGGAAAGTACCATCCCCACAGATTCAG...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGATTCTATTCAAGTGGGCTTCTGGCTCTTTTaGAGGAAGTTCCTCATCACA +
Preference number: 4 (lower is better)
Translates to: QWPNFHQFRKRHMDSIQVGFWLF*RKFLIT
Trigger: TGTGATGAGGAACTTCCTTCAAAAGAGCCAGAAGCC...CACTTGAATAGAATCCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGATTCTATTCAAGTGATAGACAGCATGCCCTaGATAGCTTCTTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: QWPNFHQFRKRHMDSIQVIDSMP*IASSSV
Trigger: CACAGAGGAAGAAGCTATTCAGGGCATGCTGTCTAT...CACTTGAATAGAATCCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTATGAACCTTCCTTTCTaGTGCATTTCTGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSMNLPF*CISGFY
Trigger: GTAGAAGCCAGAAATGCATCAGAAAGGAAGGTTCAT...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGATTCTATTCAAGTGATATACTTTCCATTCTaGAGGCTTGAGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QWPNFHQFRKRHMDSIQVIYFPF*RLEPLL
Trigger: CAGCAGCGGCTCAAGCCTTCAGAATGGAAAGTATAT...CACTTGAATAGAATCCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAAATATACTTTCCATTCTaGAGGCTTGAGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKIYFPF*RLEPLL
Trigger: CAGCAGCGGCTCAAGCCTTCAGAATGGAAAGTATAT...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTATAAAATTCAAGCCCTaGCAAGAGACCCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSIKFKP*QETLSS
Trigger: ACTGGAAAGGGTCTCTTGTCAGGGCTTGAATTTTAT...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACATCTTTACCCTACCACTaGAAATACATCAAGACACTA +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTSLPYH*KYIKTL
Trigger: TAGTGTCTTGATGTATTTTCAGTGGTAGGGTAAAGA...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTAAACGAAATGAGAAATaGGGGATCTTTCATGGAGTT +
Preference number: 4 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVKRNEK*GIFHGV
Trigger: AACTCCATGAAAGATCCCTCATTTCTCATTTCGTTT...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp AATCCAGGAGGAAGTCCTCAAGTCTGGATCTTCAGTCTTGACATGGTATCCTGTAAACGAAATGAGAAATaGGGGATCTTTCATGGAGTT +
Preference number: 4 (lower is better)
Translates to: NPGGSPQVWIFSLDMVSCKRNEK*GIFHGV
Trigger: AACTCCATGAAAGATCCCTCATTTCTCATTTCGTTT...ACAGGATACCATGTCAAGACTGAAGATCCAGACTTGAGGACTTCCTCCTGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472616.1
CDS-3UTR TCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTCCAATGGATCCCAGCTaGACAGTCACTTATTTGAAA +
Preference number: 4 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSPMDPS*TVTYLK
Trigger: TTTCAAATAAGTGACTGTTCAGCTGGGATCCATTGG...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTGTATTTCTAGGATACTaGACTACTACAAACTGCCAA +
Preference number: 4 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVVFLGY*TTTNCQ
Trigger: TTGGCAGTTTGTAGTAGTTCAGTATCCTAGAAATAC...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACAACTTGGAAGAATCACTaGATACAGTTTCGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTTWKNH*IQFRKV
Trigger: AACCTTTCGAAACTGTATTCAGTGATTCTTCCAAGT...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCAATTTTAAAGCAGTATaGAGTGCTTTCACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQANFKAV*SAFTPC
Trigger: ACAGGGAGTGAAAGCACTGCATACTGCTTTAAAATT...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGATTCTATTCAAGTGATAAGGTATAACCTCTaGAGCAGGTGCCAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: QWPNFHQFRKRHMDSIQVIRYNL*SRCQSC
Trigger: ACAGGACTGGCACCTGCTGCAGAGGTTATACCTTAT...CACTTGAATAGAATCCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGACATGAGATAAAGGGATaGATTATGGCCAGTAATGTT +
Preference number: 4 (lower is better)
Translates to: TVWEGRGISQTQIFDILRHEIKG*IMASNV
Trigger: AACATTACTGGCCATAATGCATCCCTTTATCTCATG...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTACATGAGATAAAGGGATaGATTATGGCCAGTAATGTT +
Preference number: 4 (lower is better)
Translates to: SKLLVPNPELSLCILTFLHEIKG*IMASNV
Trigger: AACATTACTGGCCATAATGCATCCCTTTATCTCATG...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACAGCATTTCCTGATCAGTaGTATTTCATACCTAACAAC +
Preference number: 4 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTAFPDQ*YFIPNN
Trigger: GTTGTTAGGTATGAAATAGCACTGATCAGGAAATGC...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGAAGTTCCAGCTTGCACTaGTTTGGAACCATCATCAAT +
Preference number: 4 (lower is better)
Translates to: FDQESLDQWPNFHQFRKRSSSLH*FGTIIN
Trigger: ATTGATGATGGTTCCAAACCAGTGCAAGCTGGAACT...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CCA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTAATTTCACTTCTAGATaGCTTCTGGCTCTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRNFTSR*LLALLK
Trigger: CTTCAAAAGAGCCAGAAGCCATCTAGAAGTGAAATT...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGATCCCAAGACGTTGTTTaGCTGTTGCCATTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: FDQESLDQWPNFHQFRKRSQDVV*LLPFLF
Trigger: AAAAAGGAATGGCAACAGCCAAACAACGTCTTGGGA...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp ATGTCAAACGAAATGAGAAATGAGGGATCTTTCATGGAGTTCTTACACATTGGCCCACCAGGTCCAAAATaGTTATTGCTGAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: MSNEMRNEGSFMEFLHIGPPGPK*LLLSGC
Trigger: ACACCCACTCAGCAATAACCATTTTGGACCTGGTGG...GCCAATGTGTAAGAACTCCATGAAAGATCCCTCATTTCTCATTTCGTTTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTGGAGTTCTTACACATTaGCTACGAAAGTGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSGVLTH*LRKCFP
Trigger: AGGGAAACACTTTCGTAGCCAATGTGTAAGAACTCC...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCCATGACATTTTGGAATaGGGACACAAGAAGTATTTC +
Preference number: 4 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQAHDILE*GHKKYF
Trigger: GAAATACTTCTTGTGTCCCCATTCCAAAATGTCATG...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTATGGATTCTATTCAAGTaGTTCTATTACCTCGCTGAA +
Preference number: 4 (lower is better)
Translates to: SKLLVPNPELSLCILTFLWILFK*FYYLAE
Trigger: TTCAGCGAGGTAATAGAACCACTTGAATAGAATCCA...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGTTGTCCAACAGCAGCAGTACGAAGAAGGCCTGCTGTAGTTACAAATGTACTCTTTCACTTCTACAGTaGCATATCTCAGTTGAAACT +
Preference number: 4 (lower is better)
Translates to: LLSNSSSTKKACCSYKCTLSLLQ*HISVET
Trigger: AGTTTCAACTGAGATATGCCACTGTAGAAGTGAAAG...AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACTGCTGCTGTTGGACAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGATTCTATTCAAGTGACTCTGGGTCACAGATaGACTCCAAGATTCATAACG +
Preference number: 4 (lower is better)
Translates to: QWPNFHQFRKRHMDSIQVTLGHR*TPRFIT
Trigger: CGTTATGAATCTTGGAGTTCATCTGTGACCCAGAGT...CACTTGAATAGAATCCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR TCA 90 bp CAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGATTCTATTCAAGTGGGAGTTCGGACATTATaGTCTCGAAGTTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: QWPNFHQFRKRHMDSIQVGVRTL*SRSFLI
Trigger: GATGAGGAAACTTCGAGATCATAATGTCCGAACTCC...CACTTGAATAGAATCCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACCCATTCAGTGGTTTTTaGGATTCTTCATGTTCCACT +
Preference number: 4 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHPFSGF*DSSCST
Trigger: AGTGGAACATGAAGAATCTCAAAAACCACTGAATGG...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTGCATACTGGGTCACATaGTATTCCAATCAACTCTAT +
Preference number: 4 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSAYWVT*YSNQLY
Trigger: ATAGAGTTGATTGGAATATCATGTGACCCAGTATGC...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTGTTTTCCTCCTCTATTaGTCGAATTACTTTAGAAAG +
Preference number: 4 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVVFLLY*SNYFRK
Trigger: CTTTCTAAAGTAATTCGAGCAATAGAGGAGGAAAAC...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGAGTTTCTTTCACCACTaGAGTCTGTGCTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMSFFHH*SLCFVF
Trigger: AAATACAAAGCACAGACTGCAGTGGTGAAAGAAACT...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACACAAAGAAACGTaGATGGCCATTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSSHKET*MAISVQ
Trigger: TTGAACAGAAATGGCCATGCACGTTTCTTTGTGTGA...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGCATTTCCTGATCAGTaGTATTTCATACCTAACAAC +
Preference number: 4 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMAFPDQ*YFIPNN
Trigger: GTTGTTAGGTATGAAATAGCACTGATCAGGAAATGC...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAAAAGAACACCTCACTCTaGGTCACAGATGAACTCCAA +
Preference number: 4 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKKNTSL*VTDELQ
Trigger: TTGGAGTTCATCTGTGACCCAGAGTGAGGTGTTCTT...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CCA 90 bp CAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGACAAAGAAACGTGCATaGCCATTTCTGTTCAACTTA +
Preference number: 4 (lower is better)
Translates to: QESLDQWPNFHQFRKRHMTKKRA*PFLFNL
Trigger: TAAGTTGAACAGAAATGGCCATGCACGTTTCTTTGT...CATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTATGAGGGATCTTTCATaGAGTTCTTACACATTGGCT +
Preference number: 4 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSMRDLS*SSYTLA
Trigger: AGCCAATGTGTAAGAACTCCATGAAAGATCCCTCAT...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTATACTGCTAATTTCCTaGAGAAGATACCTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSILLIS*RRYLQG
Trigger: CCCTTGAAGGTATCTTCTCCAGGAAATTAGCAGTAT...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTCAGCTGATACCTAAATaGCAGAACTTCGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFQLIPK*QNFDKS
Trigger: GCTTTTGTCGAAGTTCTGCCATTTAGGTATCAGCTG...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTTCCCTGACTGTAATGTaGAAGTTATACGTAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFSLTVM*KLYVAL
Trigger: CAGAGCTACGTATAACTTCCACATTACAGTCAGGGA...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACCGTCTCACATTCCACTaGTTTATCATAGCGATACAA +
Preference number: 4 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHRLTFH*FIIAIQ
Trigger: TTGTATCGCTATGATAAACCAGTGGAATGTGAGACG...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472616.1
CDS-3UTR TCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACAGACATCTTTGTATCTaGAAATTCAAGGCTGATCAC +
Preference number: 4 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHRHLCI*KFKADH
Trigger: GTGATCAGCCTTGAATTTTCAGATACAAAGATGTCT...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR TCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACCAATGTCAAACGAAATaGGAAATGAGGGATCTTTCA +
Preference number: 4 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHQCQTK*EMRDLS
Trigger: TGAAAGATCCCTCATTTCTCATTTCGTTTGACATTG...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp ATGTCAAACGAAATGAGAAATGAGGGATCTTTCATGGAGTTCTTACACATTGGCCCAATGGATCCCAGCTaGACAGTCACTTATTTGAAA +
Preference number: 4 (lower is better)
Translates to: MSNEMRNEGSFMEFLHIGPMDPS*TVTYLK
Trigger: TTTCAAATAAGTGACTGTTCAGCTGGGATCCATTGG...GCCAATGTGTAAGAACTCCATGAAAGATCCCTCATTTCTCATTTCGTTTGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTCCAAGATTCATAACGTaGCAAATTTTCATCTGTTGG +
Preference number: 4 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSPRFIT*QIFICW
Trigger: CCAACAGATGAAAATTTGGCACGTTATGAATCTTGG...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR GCA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACTTACAACTAGCTAAATaGTATCAGTGCTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHLQLAK*YQCCLP
Trigger: AGGAAGACAGCACTGATAGCATTTAGCTAGTTGTAA...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTTACAACTAGCTAAATaGTATCAGTGCTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSLQLAK*YQCCLP
Trigger: AGGAAGACAGCACTGATAGCATTTAGCTAGTTGTAA...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGAACTGTGGAGGATGGTTaGAGATGTTTGTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: FDQESLDQWPNFHQFRKRTVEDG*RCLLNF
Trigger: AAAATTCAACAAACATCTCCAACCATCCTCCACAGT...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp ATGTCAAACGAAATGAGAAATGAGGGATCTTTCATGGAGTTCTTACACATTGGCTCTTTCCACTGGTTTTaGCATAGTGTAGACAGGGTT +
Preference number: 4 (lower is better)
Translates to: MSNEMRNEGSFMEFLHIGSFHWF*HSVDRV
Trigger: AACCCTGTCTACACTATGCCAAAACCAGTGGAAAGA...GCCAATGTGTAAGAACTCCATGAAAGATCCCTCATTTCTCATTTCGTTTGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp ATGTCAAACGAAATGAGAAATGAGGGATCTTTCATGGAGTTCTTACACATTGGCAGATTTTTGACATCCTaGGATAAGATGACTCTACCC +
Preference number: 4 (lower is better)
Translates to: MSNEMRNEGSFMEFLHIGRFLTS*DKMTLP
Trigger: GGGTAGAGTCATCTTATCTCAGGATGTCAAAAATCT...GCCAATGTGTAAGAACTCCATGAAAGATCCCTCATTTCTCATTTCGTTTGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAAGCATACTGGGTCACATaGTATTCCAATCAACTCTAT +
Preference number: 4 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKAYWVT*YSNQLY
Trigger: ATAGAGTTGATTGGAATATCATGTGACCCAGTATGC...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp ATGTCAAACGAAATGAGAAATGAGGGATCTTTCATGGAGTTCTTACACATTGGCAAGAAATGGCCAAAATaGAACTGGTTGGAGACAAGT +
Preference number: 4 (lower is better)
Translates to: MSNEMRNEGSFMEFLHIGKKWPK*NWLETS
Trigger: ACTTGTCTCCAACCAGTTTCATTTTGGCCATTTCTT...GCCAATGTGTAAGAACTCCATGAAAGATCCCTCATTTCTCATTTCGTTTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR TCA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAACCTCTTTCCACAGCATaGAACTGTTATGGCTTAATT +
Preference number: 4 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKPLSTA*NCYGLI
Trigger: AATTAAGCCATAACAGTTTCATGCTGTGGAAAGAGG...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTTGGATTCTATTCAAGTaGTTCTATTACCTCGCTGAA +
Preference number: 4 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFWILFK*FYYLAE
Trigger: TTCAGCGAGGTAATAGAACCACTTGAATAGAATCCA...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CAGTGGCCGAATTTTCACCAATTCAGAAAAAGACACATGGATTCTATTCAAGTGCTGAATCTGTGGGGATaGTACTTTCCTAATTCTTCA +
Preference number: 4 (lower is better)
Translates to: QWPNFHQFRKRHMDSIQVLNLWG*YFPNSS
Trigger: TGAAGAATTAGGAAAGTACCATCCCCACAGATTCAG...CACTTGAATAGAATCCATGTGTCTTTTTCTGAATTGGTGAAAATTCGGCCACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
3UTR CAA 72 bp CAACTAGCTAAATGCTATCAGTGCTGTCTTCCTAAGTaGCTGTGTCTGTATGGTATAAATGAGGTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: QLAKCYQCCLPK*LCLYGINEVLY
Trigger: ATAGAGAACCTCATTTATACCATACAGACACAGCAACTTAGGAAGACAGCACTGATAGCATTTAGCTAGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp ATGTCAAACGAAATGAGAAATGAGGGATCTTTCATGGAGTTCTTACACATTGGCAATTTTAAAGCAGTATaGAGTGCTTTCACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: MSNEMRNEGSFMEFLHIGNFKAV*SAFTPC
Trigger: ACAGGGAGTGAAAGCACTGCATACTGCTTTAAAATT...GCCAATGTGTAAGAACTCCATGAAAGATCCCTCATTTCTCATTTCGTTTGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR GCA 90 bp ATGTCAAACGAAATGAGAAATGAGGGATCTTTCATGGAGTTCTTACACATTGGCAGTTTCTTTCACCACTaGAGTCTGTGCTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: MSNEMRNEGSFMEFLHIGSFFHH*SLCFVF
Trigger: AAATACAAAGCACAGACTGCAGTGGTGAAAGAAACT...GCCAATGTGTAAGAACTCCATGAAAGATCCCTCATTTCTCATTTCGTTTGACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp ATGTCAAACGAAATGAGAAATGAGGGATCTTTCATGGAGTTCTTACACATTGGCCTTTCACTTCTACAGTaGCATATCTCAGTTGAAACT +
Preference number: 4 (lower is better)
Translates to: MSNEMRNEGSFMEFLHIGLSLLQ*HISVET
Trigger: AGTTTCAACTGAGATATGCCACTGTAGAAGTGAAAG...GCCAATGTGTAAGAACTCCATGAAAGATCCCTCATTTCTCATTTCGTTTGACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CCA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAACTACAAACCAACATATaGCTTCAAAGAAAGGGAATT +
Preference number: 4 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKLQTNI*LQRKGI
Trigger: AATTCCCTTTCTTTGAAGCCATATGTTGGTTTGTAG...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CAA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAGATCTTCCCAAGACGTaGTTTGGCTGTTGCCATTCC +
Preference number: 5 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSDLPKT*FGCCHS
Trigger: GGAATGGCAACAGCCAAACAACGTCTTGGGAAGATC...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCATTATTTCATCGGCACTaGGGAAGACTCGAGAGCGTA +
Preference number: 5 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSLFHRH*GRLESV
Trigger: TACGCTCTCGAGTCTTCCCAAGTGCCGATGAAATAA...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CAA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGAGTTCTAGTTCCAGCTaGCACTGGTTTGGAACCATC +
Preference number: 5 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWSSSSS*HWFGTI
Trigger: GATGGTTCCAAACCAGTGCAAGCTGGAACTAGAACT...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CAA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGGGGAAGTTGCTTCATTaGAGGATCGTGAAACTGGAC +
Preference number: 5 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWGKLLH*RIVKLD
Trigger: GTCCAGTTTCACGATCCTCAAATGAAGCAACTTCCC...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCATGCTGTATAAAGACTTaGATCTGCAAAGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSCCIKT*ICKGLP
Trigger: AGGCAGCCCTTTGCAGATCAAAGTCTTTATACAGCA...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGCCTTTTGTTGCCTGGTaGCTGATAGGTGGTGGATTT +
Preference number: 5 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWPFVAW*LIGGGF
Trigger: AAATCCACCACCTATCAGCAACCAGGCAACAAAAGG...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACATTCCATTCTGAAGGCTaGAGCCGCTGCTGTCCACAT +
Preference number: 5 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTFHSEG*SRCCPH
Trigger: ATGTGGACAGCAGCGGCTCAAGCCTTCAGAATGGAA...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCTTCCATTCTGAAGGCTaGAGCCGCTGCTGTCCACAT +
Preference number: 5 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQAFHSEG*SRCCPH
Trigger: ATGTGGACAGCAGCGGCTCAAGCCTTCAGAATGGAA...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGAATGTTATAAGACGTTaGACCAGGAGTCACTGGATC +
Preference number: 5 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWNVIRR*TRSHWI
Trigger: GATCCAGTGACTCCTGGTCAAACGTCTTATAACATT...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAGCAGAGCAGATAAACTaGGAAGAATCACTGAATACA +
Preference number: 5 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSAEQIN*EESLNT
Trigger: TGTATTCAGTGATTCTTCCAAGTTTATCTGCTCTGC...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAACCACACCCCACGCCATaGTCACACAGTGGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKPHPTP*SHSGLP
Trigger: CGGAAGCCCACTGTGTGACAATGGCGTGGGGTGTGG...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTTGGCTTCTGGCTCTTTaGAAGGAAGTTCCTCATCAC +
Preference number: 5 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGWLLAL*KEVPHH
Trigger: GTGATGAGGAACTTCCTTCAAAAGAGCCAGAAGCCA...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CTGTTGTCCAACAGCAGCAGTACGAAGAAGGCCTGCTGTAGTTACAAATGTACTGATCTTCCCAAGACGTaGTTTGGCTGTTGCCATTCC +
Preference number: 5 (lower is better)
Translates to: LLSNSSSTKKACCSYKCTDLPKT*FGCCHS
Trigger: GGAATGGCAACAGCCAAACAACGTCTTGGGAAGATC...AGTACATTTGTAACTACAGCAGGCCTTCTTCGTACTGCTGCTGTTGGACAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp ACCCCACGCCATTGTCACACAGTGGGCTTCCGGACTGAAAGGACACACATGTCAAACAAGCTCATTGCTTaGGAAATAGACATTTGCTTC +
Preference number: 5 (lower is better)
Translates to: TPRHCHTVGFRTERTHMSNKLIA*EIDICF
Trigger: GAAGCAAATGTCTATTTCCAAAGCAATGAGCTTGTT...TGACATGTGTGTCCTTTCAGTCCGGAAGCCCACTGTGTGACAATGGCGTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTTTTCTCCAGATATCTTaGTGTCAGCTGGCTGCCATG +
Preference number: 5 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRFLQIS*CQLAAM
Trigger: CATGGCAGCCAGCTGACACAAAGATATCTGGAGAAA...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CAA 90 bp CTACCCTCCTTCTTCCTCTCCCCCACCAGGTCCAAAATGGTTATTGCTGAGTGGCCAATTCAGACATCTTaGTATCTGAAAATTCAAGGC +
Preference number: 5 (lower is better)
Translates to: LPSFFLSPTRSKMVIAEWPIQTS*YLKIQG
Trigger: GCCTTGAATTTTCAGATACAAAGATGTCTGAATTGG...CCACTCAGCAATAACCATTTTGGACCTGGTGGGGGAGAGGAAGAAGGAGGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CAA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTACCCAGGAAAGTTTTTaGGCTATATCAGGGACCTCC +
Preference number: 5 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVTQESF*AISGTS
Trigger: GGAGGTCCCTGATATAGCCAAAAAACTTTCCTGGGT...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CAA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACAGGGAAGTTGCTTCATTaGAGGATCGTGAAACTGGAC +
Preference number: 5 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTGKLLH*RIVKLD
Trigger: GTCCAGTTTCACGATCCTCAAATGAAGCAACTTCCC...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGACACATCTCTAATCTTTaGAGGACCTCCCTTGTGTGG +
Preference number: 5 (lower is better)
Translates to: TVWEGRGISQTQIFDILRHISNL*RTSLVW
Trigger: CCACACAAGGGAGGTCCTCAAAAGATTAGAGATGTG...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTTGGCTTCTGGCTCTTTaGAAGGAAGTTCCTCATCAC +
Preference number: 5 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVWLLAL*KEVPHH
Trigger: GTGATGAGGAACTTCCTTCAAAAGAGCCAGAAGCCA...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACACCTTTTGTTGCCTGGTaGCTGATAGGTGGTGGATTT +
Preference number: 5 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTPFVAW*LIGGGF
Trigger: AAATCCACCACCTATCAGCAACCAGGCAACAAAAGG...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTTTCCCAAGACGTTGTTaGGCTGTTGCCATTCCTTTT +
Preference number: 5 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGFPRRC*AVAIPF
Trigger: AAAAGGAATGGCAACAGCCAAACAACGTCTTGGGAA...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACCTACCAAGCAAACTGTaGGTACCCAACCCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHLPSKL*VPNPEL
Trigger: CAGCTCTGGGTTGGGTACCAACAGTTTGCTTGGTAG...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGAAAGGCAGAAAGAATCTaGTCTGTTGAAGATGTCTGG +
Preference number: 5 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRKAERI*SVEDVW
Trigger: CCAGACATCTTCAACAGACAAGATTCTTTCTGCCTT...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CTGCCTATACAAACAAGACGAGACGCTATTCCGCAGACACCCCCAACAAGAAGATCTGGATCTTCAGTCTaGACATGGTATCCTGTAATC +
Preference number: 5 (lower is better)
Translates to: LPIQTRRDAIPQTPPTRRSGSSV*TWYPVI
Trigger: GATTACAGGATACCATGTCAAGACTGAAGATCCAGA...TCTTCTTGTTGGGGGTGTCTGCGGAATAGCGTCTCGTCTTGTTTGTATAGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472616.1
CDS TCA 90 bp GTGTGGAGCTCTAGGATGTCTAGGTTAGAAGGAGTTCGGACATTATaGTCTCGAAGTTTCCTCATCTTTCTTCGGGAATGGTATGGGGAA +
Preference number: 5 (lower is better)
Translates to: VWSSRMSRLEGVRTL*SRSFLIFLREWYGE
Trigger: TTCCCCATACCATTCCCGAAGAAAGATGAGGAAACTTCGAGATCATAATGTCCGAACTCCTTCTAACCTAGACATCCTAGAGCTCCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp TCAGAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTTGCTGTATAAAGACTTaGATCTGCAAAGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: SECHRSCIGKLLGDQGLRCCIKT*ICKGLP
Trigger: AGGCAGCCCTTTGCAGATCAAAGTCTTTATACAGCA...ACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGATCTGGATCTTCAGTCTaGACATGGTATCCACATTCC +
Preference number: 5 (lower is better)
Translates to: TVWEGRGISQTQIFDILRSGSSV*TWYPHS
Trigger: GGAATGTGGATACCATGTCAAGACTGAAGATCCAGA...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CAA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCCCCCCGAAGTCAGGTTaGAATTCTGCATATACTTTC +
Preference number: 5 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQAPPKSG*NSAYTF
Trigger: GAAAGTATATGCAGAATTCAAACCTGACTTCGGGGG...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTCCCCCGAAGTCAGGTTaGAATTCTGCATATACTTTC +
Preference number: 5 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVPPKSG*NSAYTF
Trigger: GAAAGTATATGCAGAATTCAAACCTGACTTCGGGGG...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACATGGAGTTCTTACACATaGGCTACGAAAGTGTTTCCC +
Preference number: 5 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTWSSYT*ATKVFP
Trigger: GGGAAACACTTTCGTAGCCAATGTGTAAGAACTCCA...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCTTAAAGCTGCTCTCTTaGGGACCCAGATATCATCAG +
Preference number: 5 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQALKLLS*GPRYHQ
Trigger: CTGATGATATCTGGGTCCCAAAGAGAGCAGCTTTAA...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGAAACCCAGAGCTGTCTTaGTGCATTCTCACCTTTCTA +
Preference number: 5 (lower is better)
Translates to: TVWEGRGISQTQIFDILRNPELS*CILTFL
Trigger: TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTT...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCAACCCAGAGCTGTCTTaGTGCATTCTCACCTTTCTA +
Preference number: 5 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQANPELS*CILTFL
Trigger: TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTT...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCAAAGAATCTTGTCTGTaGAAGATGTCTGGTGGCGTC +
Preference number: 5 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQAKESCL*KMSGGV
Trigger: GACGCCACCAGACATCTTCAACAGACAAGATTCTTT...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS TCA 90 bp AATTGTGAAGTGTCATTTTGCTGTCTGCCTGCCTCGCCACATCAATaGCATCTATCACTTTGTCACCACCTACATAACGTTCCACATCCA +
Preference number: 5 (lower is better)
Translates to: NCEVSFCCLPASPHQ*HLSLCHHLHNVPHP
Trigger: TGGATGTGGAACGTTATGTAGGTGGTGACAAAGTGATAGATGTCATTGATGTGGCGAGGCAGGCAGACAGCAAAATGACACTTCACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CAA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTCCCATTCAGTGGTTTTaGAGATTCTTCATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVPIQWF*RFFMFH
Trigger: GTGGAACATGAAGAATCTCAAAAACCACTGAATGGG...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGACCCATTCAGTGGTTTTaGAGATTCTTCATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: TVWEGRGISQTQIFDILRPIQWF*RFFMFH
Trigger: GTGGAACATGAAGAATCTCAAAAACCACTGAATGGG...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGGTCCAAAATGGTTATaGCTGAGTGGGTGTGGCACA +
Preference number: 5 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFGPKWL*LSGCGT
Trigger: TGTGCCACACCCACTCAGCAATAACCATTTTGGACC...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACATTATCCCATGACATTTaGGAATGGGGACACAAGAAG +
Preference number: 5 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTLSHDI*EWGHKK
Trigger: CTTCTTGTGTCCCCATTCCAAAATGTCATGGGATAA...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp AGCAAACTGTTGGTACCCAACCCAGAGCTGTCTTTGTGCATTCTCACCTTTCTATGCTGTCTTCCTAAGTaGCTGTGTCTGTATGGTATA +
Preference number: 5 (lower is better)
Translates to: SKLLVPNPELSLCILTFLCCLPK*LCLYGI
Trigger: TATACCATACAGACACAGCAACTTAGGAAGACAGCA...TAGAAAGGTGAGAATGCACAAAGACAGCTCTGGGTTGGGTACCAACAGTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp AGGCAGAAAGAATCTTGTCTGTTGAAGATGTCTGGTGGCGTCTCCTTTCCTACAAAGTTCCCTGGGGAGTaGCTAAGTCATTTTAATTCC +
Preference number: 5 (lower is better)
Translates to: RQKESCLLKMSGGVSFPTKFPGE*LSHFNS
Trigger: GGAATTAAAATGACTTAGCAACTCCCCAGGGAACTT...TGTAGGAAAGGAGACGCCACCAGACATCTTCAACAGACAAGATTCTTTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGAAAGTTCCCTGGGGAGTaGCTAAGTCATTTTAATTCC +
Preference number: 5 (lower is better)
Translates to: TVWEGRGISQTQIFDILRKFPGE*LSHFNS
Trigger: GGAATTAAAATGACTTAGCAACTCCCCAGGGAACTT...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACCCAGCTTGCACTGGTTaGGAACCATCATCAATTTCT +
Preference number: 5 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHPACTG*EPSSIS
Trigger: AGAAATTGATGATGGTTCCAAACCAGTGCAAGCTGG...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CAA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGAATAACAGTATGCACCTaGGATGTTAGCAAAAGCGAA +
Preference number: 5 (lower is better)
Translates to: TVWEGRGISQTQIFDILRITVCT*DVSKSE
Trigger: TTCGCTTTTGCTAACATCCAAGGTGCATACTGTTAT...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp GAGTGTCACAGGTCTTGCATAGGTAAACTACTTGGAGATCAAGGGCTACGTGGTATCATCTTAACGTACTaGAGGATACACATTCTCACT +
Preference number: 5 (lower is better)
Translates to: ECHRSCIGKLLGDQGLRGIILTY*RIHILT
Trigger: AGTGAGAATGTGTATCCTCAAGTACGTTAAGATGAT...ACCACGTAGCCCTTGATCTCCAAGTAGTTTACCTATGCAAGACCTGTGACACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGAAAAGAATCTTGTCTGTaGAAGATGTCTGGTGGCGTC +
Preference number: 5 (lower is better)
Translates to: FDQESLDQWPNFHQFRKRKESCL*KMSGGV
Trigger: GACGCCACCAGACATCTTCAACAGACAAGATTCTTT...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS TCA 90 bp GCTTCATTTGAGGATCGTGAAACTGGACACACAATAGGAATTCCCTaGGATTTAACTGGTTTGCCGTTTTCCTCCTCTATTGCTCGAATT +
Preference number: 5 (lower is better)
Translates to: ASFEDRETGHTIGIP*DLTGLPFSSSIARI
Trigger: AATTCGAGCAATAGAGGAGGAAAACGGCAAACCAGTTAAATCTCAGGGAATTCCTATTGTGTGTCCAGTTTCACGATCCTCAAATGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS GCA 90 bp TCAAATCCATGTTTCTCCAGATATCTTTGTGTCAGCTGGCTGCCATaGATCTTTATAATTATTTCATCGGCACTTGGGAAGACTCGAGAG +
Preference number: 5 (lower is better)
Translates to: SNPCFSRYLCVSWLP*IFIIISSALGKTRE
Trigger: CTCTCGAGTCTTCCCAAGTGCCGATGAAATAATTATAAAGATGCATGGCAGCCAGCTGACACAAAGATATCTGGAGAAACATGGATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS CCA 90 bp TCTGGAAGTATCAAACTGTTTAATCCAGGAGGAAGTCCTCAAGTCTaGATCTTCAGTCTTGACATGGTATCCACATTCCACTGGTTTATC +
Preference number: 5 (lower is better)
Translates to: SGSIKLFNPGGSPQV*IFSLDMVSTFHWFI
Trigger: GATAAACCAGTGGAATGTGGATACCATGTCAAGACTGAAGATCCAGACTTGAGGACTTCCTCCTGGATTAAACAGTTTGATACTTCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CAA 90 bp TTTGACCAGGAGTCACTGGATCAGTGGCCGAATTTTCACCAATTCAGAAAAAGATGTCCAGGTCTAACATaGTCTGGAATTTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: FDQESLDQWPNFHQFRKRCPGLT*SGISKA
Trigger: TGCCTTTGAAATTCCAGACAATGTTAGACCTGGACA...TCTTTTTCTGAATTGGTGAAAATTCGGCCACTGATCCAGTGACTCCTGGTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp ATGTCAAACGAAATGAGAAATGAGGGATCTTTCATGGAGTTCTTACACATTGGCCACATCTCTAATCTTTaGAGGACCTCCCTTGTGTGG +
Preference number: 5 (lower is better)
Translates to: MSNEMRNEGSFMEFLHIGHISNL*RTSLVW
Trigger: CCACACAAGGGAGGTCCTCAAAAGATTAGAGATGTG...GCCAATGTGTAAGAACTCCATGAAAGATCCCTCATTTCTCATTTCGTTTGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp TTCTTTCCACCTGGTTTCAAGGAAGCACATGAACATCATCTCATAGGGCAAGCCGATGGTTGGAGATGTTaGTTGAATTTTCCATTCAGT +
Preference number: 5 (lower is better)
Translates to: FFPPGFKEAHEHHLIGQADGWRC*LNFPFS
Trigger: ACTGAATGGAAAATTCAACAAACATCTCCAACCATC...GGCTTGCCCTATGAGATGATGTTCATGTGCTTCCTTGAAACCAGGTGGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CCAAAATGGTTATTGCTGAGTGGGTGTGGCACAGTGAAAATGCAGCATCAGGTTGATGGTTGGAGATGTTaGTTGAATTTTCCATTCAGT +
Preference number: 5 (lower is better)
Translates to: PKWLLLSGCGTVKMQHQVDGWRC*LNFPFS
Trigger: ACTGAATGGAAAATTCAACAAACATCTCCAACCATC...AACCTGATGCTGCATTTTCACTGTGCCACACCCACTCAGCAATAACCATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTCAGGGTTTACACGGGTaGTTTATAGACACTAAGGAT +
Preference number: 5 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSQGLHG*FIDTKD
Trigger: ATCCTTAGTGTCTATAAACAACCCGTGTAAACCCTG...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp ACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTTCACTGCTGTCTTCCTAAGTaGCTGTGTCTGTATGGTATA +
Preference number: 5 (lower is better)
Translates to: TTKLVNTRANNCPLSKVHCCLPK*LCLYGI
Trigger: TATACCATACAGACACAGCAACTTAGGAAGACAGCA...GTGAACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp ACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTGACATCCTGAGAAACAAGCTCATTGCTTaGGAAATAGACATTTGCTTC +
Preference number: 5 (lower is better)
Translates to: TVWEGRGISQTQIFDILRNKLIA*EIDICF
Trigger: GAAGCAAATGTCTATTTCCAAAGCAATGAGCTTGTT...TCTCAGGATGTCAAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS CCA 90 bp ATAGGGACATCAAATCCATGTTTCTCCAGATATCTTTGTGTCAGCTaGCTGCCATGCATCTTTATAATTATTTCATCGGCACTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: IGTSNPCFSRYLCVS*LPCIFIIISSALGK
Trigger: CTTCCCAAGTGCCGATGAAATAATTATAAAGATGCATGGCAGCCAGCTGACACAAAGATATCTGGAGAAACATGGATTTGATGTCCCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS CCA 90 bp CGTCGAGGTAGGACATTCCCTTTTAATTGGAATTTCACTTCTAGATaGCTTCTGGCTCTTTTGAAGGAAGTTCCTCATCACATTAGATTC +
Preference number: 5 (lower is better)
Translates to: RRGRTFPFNWNFTSR*LLALLKEVPHHIRF
Trigger: GAATCTAATGTGATGAGGAACTTCCTTCAAAAGAGCCAGAAGCCATCTAGAAGTGAAATTCCAATTAAAAGGGAATGTCCTACCTCGACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAAAATGGTATGGGGAAGTaGCTTCATTTGAGGATCGTG +
Preference number: 5 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKNGMGK*LHLRIV
Trigger: CACGATCCTCAAATGAAGCAACTTCCCCATACCATT...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAATGGAGTTCTTACACATaGGCTACGAAAGTGTTTCCC +
Preference number: 5 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKWSSYT*ATKVFP
Trigger: GGGAAACACTTTCGTAGCCAATGTGTAAGAACTCCA...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAATTAAAGCTGCTCTCTTaGGGACCCAGATATCATCAG +
Preference number: 5 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKLKLLS*GPRYHQ
Trigger: CTGATGATATCTGGGTCCCAAAGAGAGCAGCTTTAA...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTCAGGGTTTACACGGGTaGTTTATAGACACTAAGGAT +
Preference number: 5 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFQGLHG*FIDTKD
Trigger: ATCCTTAGTGTCTATAAACAACCCGTGTAAACCCTG...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAATGTCCAGGTCTAACATaGTCTGGAATTTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKCPGLT*SGISKA
Trigger: TGCCTTTGAAATTCCAGACAATGTTAGACCTGGACA...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp TCACAAGAATATACTGTGTGGGAAGGTAGGGGAATCAGTCAAACCCAGATTTTTATAACAGTATGCACCTaGGATGTTAGCAAAAGCGAA +
Preference number: 5 (lower is better)
Translates to: SQEYTVWEGRGISQTQIFITVCT*DVSKSE
Trigger: TTCGCTTTTGCTAACATCCAAGGTGCATACTGTTAT...AAAAATCTGGGTTTGACTGATTCCCCTACCTTCCCACACAGTATATTCTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAATTATCCCATGACATTTaGGAATGGGGACACAAGAAG +
Preference number: 5 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKLSHDI*EWGHKK
Trigger: CTTCTTGTGTCCCCATTCCAAAATGTCATGGGATAA...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp ATGTCAAACGAAATGAGAAATGAGGGATCTTTCATGGAGTTCTTACACATTGGCAATGTTATAAGACGTTaGACCAGGAGTCACTGGATC +
Preference number: 5 (lower is better)
Translates to: MSNEMRNEGSFMEFLHIGNVIRR*TRSHWI
Trigger: GATCCAGTGACTCCTGGTCAAACGTCTTATAACATT...GCCAATGTGTAAGAACTCCATGAAAGATCCCTCATTTCTCATTTCGTTTGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CGTTACTACAAAACTAGTAAATACCAGAGCCAACAACTGTCCCCTCTCCAAAGTATCATCTTAACGTACTaGAGGATACACATTCTCACT +
Preference number: 5 (lower is better)
Translates to: RYYKTSKYQSQQLSPLQSIILTY*RIHILT
Trigger: AGTGAGAATGTGTATCCTCAAGTACGTTAAGATGAT...ACTTTGGAGAGGGGACAGTTGTTGGCTCTGGTATTTACTAGTTTTGTAGTAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS-3UTR CAA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAAGTTTCCAGCAAGTTTTaGGCTACAAACCAACATATG +
Preference number: 5 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKVSSKF*ATNQHM
Trigger: CATATGTTGGTTTGTAGCCAAAAACTTGCTGGAAAC...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS-3UTR CAA 90 bp CTGAAGAGTATGCTGAATCTGTGGGGATGGTACTTTCCTAATTCTTCAAGAAAAGCAGAGCAGATAAACTaGGAAGAATCACTGAATACA +
Preference number: 5 (lower is better)
Translates to: LKSMLNLWGWYFPNSSRKAEQIN*EESLNT
Trigger: TGTATTCAGTGATTCTTCCAAGTTTATCTGCTCTGC...TTTTCTTGAAGAATTAGGAAAGTACCATCCCCACAGATTCAGCATACTCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS TCA 90 bp TCCCTTTTAATTGGAATTTCACTTCTAGATGGCTTCTGGCTCTTTTaGAGGAAGTTCCTCATCACATTAGATTCCTCCTTAAAGTTGGAT +
Preference number: 5 (lower is better)
Translates to: SLLIGISLLDGFWLF*RKFLITLDSSLKLD
Trigger: ATCCAACTTTAAGGAGGAATCTAATGTGATGAGGAACTTCCTTCAAAAGAGCCAGAAGCCATCTAGAAGTGAAATTCCAATTAAAAGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS TCA 72 bp AGATGTCCTCTTCCCATGGACACATCTCTAATCTTTTaGGGACCTCCCTTGTGTGGAGCTCTAGGATGTCTA +
Preference number: 6 (lower is better)
Translates to: RCPLPMDTSLIF*GPPLCGALGCL
Trigger: TAGACATCCTAGAGCTCCACACAAGGGAGGTCCTCAAAAGATTAGAGATGTGTCCATGGGAAGAGGACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS CAA 72 bp AAGATGTCCTCTTCCCATGGACACATCTCTAATCTTTaGAGGACCTCCCTTGTGTGGAGCTCTAGGATGTCT +
Preference number: 6 (lower is better)
Translates to: KMSSSHGHISNL*RTSLVWSSRMS
Trigger: AGACATCCTAGAGCTCCACACAAGGGAGGTCCTCAAAAGATTAGAGATGTGTCCATGGGAAGAGGACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS CAA 90 bp TTAGAGCTCAAGATGTCCTCTTCCCATGGACACATCTCTAATCTTTaGAGGACCTCCCTTGTGTGGAGCTCTAGGATGTCTAGGTTAGAA +
Preference number: 6 (lower is better)
Translates to: LELKMSSSHGHISNL*RTSLVWSSRMSRLE
Trigger: TTCTAACCTAGACATCCTAGAGCTCCACACAAGGGAGGTCCTCAAAAGATTAGAGATGTGTCCATGGGAAGAGGACATCTTGAGCTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS TCA 72 bp GTGTCATTTTGCTGTCTGCCTGCCTCGCCACATCAATaGCATCTATCACTTTGTCACCACCTACATAACGTT +
Preference number: 6 (lower is better)
Translates to: VSFCCLPASPHQ*HLSLCHHLHNV
Trigger: AACGTTATGTAGGTGGTGACAAAGTGATAGATGTCATTGATGTGGCGAGGCAGGCAGACAGCAAAATGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS CAA 72 bp GTTTCCTCATCTTTCTTCGGGAATGGTATGGGGAAGTaGCTTCATTTGAGGATCGTGAAACTGGACACACAA +
Preference number: 6 (lower is better)
Translates to: VSSSFFGNGMGK*LHLRIVKLDTQ
Trigger: TTGTGTGTCCAGTTTCACGATCCTCAAATGAAGCAACTTCCCCATACCATTCCCGAAGAAAGATGAGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS TCA 72 bp TCTAGGATGTCTAGGTTAGAAGGAGTTCGGACATTATaGTCTCGAAGTTTCCTCATCTTTCTTCGGGAATGG +
Preference number: 6 (lower is better)
Translates to: SRMSRLEGVRTL*SRSFLIFLREW
Trigger: CCATTCCCGAAGAAAGATGAGGAAACTTCGAGATCATAATGTCCGAACTCCTTCTAACCTAGACATCCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS TCA 72 bp CTTATCTCCAAAGAACACCTCACTCTGGGTCACAGATaGACTCCAAGATTCATAACGTGCCAAATTTTCATC +
Preference number: 6 (lower is better)
Translates to: LISKEHLTLGHR*TPRFITCQIFI
Trigger: GATGAAAATTTGGCACGTTATGAATCTTGGAGTTCATCTGTGACCCAGAGTGAGGTGTTCTTTGGAGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS CCA 72 bp AACTGGACACACAATAGGAATTCCCTGAGATTTAACTaGTTTGCCGTTTTCCTCCTCTATTGCTCGAATTAC +
Preference number: 6 (lower is better)
Translates to: NWTHNRNSLRFN*FAVFLLYCSNY
Trigger: GTAATTCGAGCAATAGAGGAGGAAAACGGCAAACCAGTTAAATCTCAGGGAATTCCTATTGTGTGTCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS CAA 90 bp TGGGACCATAATAGGGACATCAAATCCATGTTTCTCCAGATATCTTaGTGTCAGCTGGCTGCCATGCATCTTTATAATTATTTCATCGGC +
Preference number: 6 (lower is better)
Translates to: WDHNRDIKSMFLQIS*CQLAAMHLYNYFIG
Trigger: GCCGATGAAATAATTATAAAGATGCATGGCAGCCAGCTGACACAAAGATATCTGGAGAAACATGGATTTGATGTCCCTATTATGGTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS CCA 72 bp AGGACATTCCCTTTTAATTGGAATTTCACTTCTAGATaGCTTCTGGCTCTTTTGAAGGAAGTTCCTCATCAC +
Preference number: 6 (lower is better)
Translates to: RTFPFNWNFTSR*LLALLKEVPHH
Trigger: GTGATGAGGAACTTCCTTCAAAAGAGCCAGAAGCCATCTAGAAGTGAAATTCCAATTAAAAGGGAATGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS CAA 90 bp TGGAAACCATCTTCTCTCAGTTCTTTCAGGGTTTCCAGCAAGTTTTaGGCTACAAACCAACATATGGCTTCAAAGAAAGGGAATTTGAAA +
Preference number: 6 (lower is better)
Translates to: WKPSSLSSFRVSSKF*ATNQHMASKKGNLK
Trigger: TTTCAAATTCCCTTTCTTTGAAGCCATATGTTGGTTTGTAGCCAAAAACTTGCTGGAAACCCTGAAAGAACTGAGAGAAGATGGTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS TCA 72 bp ATTGGAATTTCACTTCTAGATGGCTTCTGGCTCTTTTaGAGGAAGTTCCTCATCACATTAGATTCCTCCTTA +
Preference number: 6 (lower is better)
Translates to: IGISLLDGFWLF*RKFLITLDSSL
Trigger: TAAGGAGGAATCTAATGTGATGAGGAACTTCCTTCAAAAGAGCCAGAAGCCATCTAGAAGTGAAATTCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1
CDS GCA 72 bp GTATTTAACATAATTGTGAAGTGTCATTTTGCTGTCTaGCTGCCTCGCCACATCAATGACATCTATCACTTT +
Preference number: 6 (lower is better)
Translates to: VFNIIVKCHFAV*LPRHINDIYHF
Trigger: AAAGTGATAGATGTCATTGATGTGGCGAGGCAGGCAGACAGCAAAATGACACTTCACAATTATGTTAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS CCA 72 bp TCAAATCCATGTTTCTCCAGATATCTTTGTGTCAGCTaGCTGCCATGCATCTTTATAATTATTTCATCGGCA +
Preference number: 6 (lower is better)
Translates to: SNPCFSRYLCVS*LPCIFIIISSA
Trigger: TGCCGATGAAATAATTATAAAGATGCATGGCAGCCAGCTGACACAAAGATATCTGGAGAAACATGGATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS CAA 72 bp AATAGGGACATCAAATCCATGTTTCTCCAGATATCTTaGTGTCAGCTGGCTGCCATGCATCTTTATAATTAT +
Preference number: 6 (lower is better)
Translates to: NRDIKSMFLQIS*CQLAAMHLYNY
Trigger: ATAATTATAAAGATGCATGGCAGCCAGCTGACACAAAGATATCTGGAGAAACATGGATTTGATGTCCCTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397560.7
CDS CAA 72 bp TTAGAAAGTTCTTTAATAAGGTGTCCAGGTCTAACATaGTCTGGAATTTCAAAGGCATGTTCAGATACAAGT +
Preference number: 6 (lower is better)
Translates to: LESSLIRCPGLT*SGISKACSDTS
Trigger: ACTTGTATCTGAACATGCCTTTGAAATTCCAGACAATGTTAGACCTGGACACCTTATTAAAGAACTTTCTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397560.7
ENST00000472616.1