RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KDM6B (Homo sapiens)

Ensembl gene IDs: ENSG00000132510

Ensembl transcript IDs: ENST00000254846.9, ENST00000448097.7, ENST00000570632.1, ENST00000571047.5, ENST00000572030.1, ENST00000575521.1

Found 626 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCAGGGTaGGGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCC +
Preference number: 1 (lower is better)
Translates to: TSRVHLRRAGGRLAG*GNPYVTPAAAGAWS
Trigger: GGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCCTCACCCTGCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR GCA 90 bp CCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCCAGGCATGTaGTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGCGG +
Preference number: 1 (lower is better)
Translates to: PPSRPQAGPRSSPGM*WWPRGALRGQAGGR
Trigger: CCGCCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR CCA 90 bp TCTCGGCCACAGGCGGGACCTAGGTCCAGCCCAGGCATGTGCTGGTaGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGCGGGGCGTC +
Preference number: 1 (lower is better)
Translates to: SRPQAGPRSSPGMCW*PRGALRGQAGGRGV
Trigger: GACGCCCCGCCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCTAGGTCCCGCCTGTGGCCGAGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR CCA 90 bp CCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCCAGGCATGTGCTaGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGCGGGGC +
Preference number: 1 (lower is better)
Translates to: PSRPQAGPRSSPGMC*WPRGALRGQAGGRG
Trigger: GCCCCGCCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR CCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTaGAGACGGTCGGGCCGGGCCCGGACACACACTGGGGCGCGGGGA +
Preference number: 1 (lower is better)
Translates to: GLSTMRTRLEPRADG*RRSGRARTHTGARG
Trigger: TCCCCGCGCCCCAGTGTGTGTCCGGGCCCGGCCCGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR GCA 90 bp AAAAACCTCGGCTGCCGTAACGTCTATGTACATACACGAGCCGCGTaGATCTGCGCCGGGCGGGCGGGCGGCTGGCAGGGTGAGGGAACC +
Preference number: 1 (lower is better)
Translates to: KNLGCRNVYVHTRAA*ICAGRAGGWQGEGT
Trigger: GGTTCCCTCACCCTGCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTACGGCAGCCGAGGTTTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR GCA 90 bp GGGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTaGCGTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCC +
Preference number: 1 (lower is better)
Translates to: GRGKAHRKNLIKNLG*RNVYVHTRAACICA
Trigger: GGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR-3UTR GCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCTCCAGCCCAGGCATGTaGTGGTGGCCCCGCGGCGCC +
Preference number: 2 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGSSPGM*WWPRGA
Trigger: GGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGA...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR-3UTR CCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCCCAGGCATGTGCTGGTaGCCCCGCGGCGCCTTGCGC +
Preference number: 2 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGPGMCW*PRGALR
Trigger: GCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGG...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR-3UTR GCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGTCCAGCCCAGGCATGTaGTGGTGGCCCCGCGGCGCC +
Preference number: 2 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLSSPGM*WWPRGA
Trigger: GGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGA...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR-3UTR CCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGCCAGGCATGTGCTGGTaGCCCCGCGGCGCCTTGCGC +
Preference number: 2 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWPGMCW*PRGALR
Trigger: GCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGG...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR-3UTR TCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCGAGGGAACCCGTATGTaGCCCCCGCCGCCGCCGGAG +
Preference number: 2 (lower is better)
Translates to: QNTISVPTSSPTVQELLTEGTRM*PPPPPE
Trigger: CTCCGGCGGCGGCGGGGGTCACATACGGGTTCCCTC...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR-3UTR CCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCAGCCCAGGCATGTGCTaGTGGCCCCGCGGCGCCTTG +
Preference number: 2 (lower is better)
Translates to: QNTISVPTSSPTVQELLTSPGMC*WPRGAL
Trigger: CAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR-3UTR CCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGGAGCTGCCAATGGGGTaGAAGGGCTGGGCCCGACCC +
Preference number: 2 (lower is better)
Translates to: GGVKPIERISLKTSAAVTELPMG*KGWARP
Trigger: GGGTCGGGCCCAGCCCTTCCACCCCATTGGCAGCTC...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR-3UTR TCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCAAAGGCCAAAGTCGGTaGGGGGAGGCGCTGGTGGGC +
Preference number: 2 (lower is better)
Translates to: QNTISVPTSSPTVQELLTKGQSR*GEALVG
Trigger: GCCCACCAGCGCCTCCCCTCACCGACTTTGGCCTTT...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR-3UTR GCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTTAAGTGAGGGGAGCTaGCAATGGGGTGGAAGGGCT +
Preference number: 2 (lower is better)
Translates to: GGVKPIERISLKTSAAVTLSEGS*QWGGRA
Trigger: AGCCCTTCCACCCCATTGGCAGCTCCCCTCACTTAA...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGGCCGCCGCCGGAGCCTaGTCCTTGTGTCTGTTGCTA +
Preference number: 2 (lower is better)
Translates to: VKPIERISLKTSAAVTSMAAAGA*SLCLLL
Trigger: TAGCAACAGACACAAGGACCAGGCTCCGGCGGCGGC...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR GCA 72 bp CGGCCACAGGCGGGACCTAGGTCCAGCCCAGGCATGTaGTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCA +
Preference number: 3 (lower is better)
Translates to: RPQAGPRSSPGM*WWPRGALRGQA
Trigger: TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCTAGGTCCCGCCTGTGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR CCA 72 bp CCACAGGCGGGACCTAGGTCCAGCCCAGGCATGTGCTaGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGC +
Preference number: 3 (lower is better)
Translates to: PQAGPRSSPGMC*WPRGALRGQAG
Trigger: GCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCTAGGTCCCGCCTGTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR CCA 72 bp ACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTaGAGACGGTCGGGCCGGGCCCGGACACACACTGGG +
Preference number: 3 (lower is better)
Translates to: TMRTRLEPRADG*RRSGRARTHTG
Trigger: CCCAGTGTGTGTCCGGGCCCGGCCCGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR-3UTR CAA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGGGCGGGCAGGATGGCTaGGGGGTGTGGGAGGTCGGG +
Preference number: 3 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSGGQDG*GVWEVG
Trigger: CCCGACCTCCCACACCCCCAAGCCATCCTGCCCGCC...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR-3UTR CAA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGGGCGGGCAGGATGGCTaGGGGGTGTGGGAGGTCGGG +
Preference number: 3 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRGGQDG*GVWEVG
Trigger: CCCGACCTCCCACACCCCCAAGCCATCCTGCCCGCC...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR-3UTR CAA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCCGGAGCCTGGTCCTaGTGTCTGTTGCTAAAAAGG +
Preference number: 3 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAAGAWS*CLLLKR
Trigger: CCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGC...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR CCA 72 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTaGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCG +
Preference number: 3 (lower is better)
Translates to: GNPYVTPAAAGA*SLCLLLKRPKS
Trigger: CGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR-3UTR CAA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCGCCGGAGCCTGGTCCTaGTGTCTGTTGCTAAAAAGG +
Preference number: 3 (lower is better)
Translates to: QNTISVPTSSPTVQELLTAGAWS*CLLLKR
Trigger: CCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGC...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGATGGCTCTCTGCTCCTaGGGGGCGGGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGMALCS*GAGAWA
Trigger: GGCCCAGGCCCCCGCCCCCCAGGAGCAGAGAGCCAT...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGCCGGCTGACACCCGGTaGCCCTGGGGCTTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGPADTR*PWGFLP
Trigger: CGGGAGGAAGCCCCAGGGCCACCGGGTGTCAGCCGG...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGAGCCCAGGCATGTGCTaGTGGCCCCGCGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGSPGMC*WPRGAL
Trigger: CAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGTTGGGCACGGCCCCCTaGCCCAGCTCTCTGGGACGA +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGLGTAP*PSSLGR
Trigger: TCGTCCCAGAGAGCTGGGGCAGGGGGCCGTGCCCAA...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGCTTGGCCTTGGCCTTTaGCCTGCCCTCACGGGGCCG +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGLGLGL*PALTGP
Trigger: CGGCCCCGTGAGGGCAGGGCAAAGGCCAAGGCCAAG...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGAGGAGCCCTGGAGATTaGGCACGGCCCCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGRSPGD*ARPPAP
Trigger: TGGGGCAGGGGGCCGTGCCCAATCTCCAGGGCTCCT...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGCGCTCTGGGGGTGCTaGACCCTTGCGCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAALWGC*TLALWA
Trigger: GGCCCAGAGCGCAAGGGTTCAGCACCCCCAGAGCGC...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCTGCTGCTGGTGGTGGTaGCGGGGAGGCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPACCWWW*RGGQGA
Trigger: GGCCCCCTGGCCTCCCCGGCACCACCACCAGCAGCA...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGCAATTCCGGCCTCCGTaGGAGCGTCCTCACACCGCG +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGQFRPP*ERPHTA
Trigger: CGCGGTGTGAGGACGCTCCCACGGAGGCCGGAATTG...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGGAGTGCCGCTGCTCCTaGCGCTCTGGGGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGECRCS*RSGGAE
Trigger: TTCAGCACCCCCAGAGCGCCAGGAGCAGCGGCACTC...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCGTGCTGGCTGGGGCCTaGGGGGAGAAAGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPAVLAGA*GEKAGG
Trigger: CCCGCCGGCTTTCTCCCCCCAGGCCCCAGCCAGCAC...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000254846.9
CDS-3UTR TCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGGGTGGTGGCTGTGGCTaGGAGGGTGGAGGGAACTTG +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGGGGCG*EGGGNL
Trigger: CAAGTTCCCTCCACCCTCTCAGCCACAGCCACCACC...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCACGGAGGCCAAGGATTTaGGCAGGCTGGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQARRPRI*AGWPGW
Trigger: CCAGCCCGGCCAGCCTGCTCAAATCCTTGGCCTCCG...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCACAGAGCTGGGCCTGCTaGAGTCGGCCAATGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAQSWAC*SRPMRG
Trigger: GCCCCGCATTGGCCGACTGCAGCAGGCCCAGCTCTG...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGTGGCAGGGATAGGTaGGGAGTGGCAGCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAGGRDR*GVAAGA
Trigger: GGCTCCCGCTGCCACTCCCCACCTATCCCTGCCACC...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCACTGGGGGTTCTGTGCTaGGCTGGGAGGCCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQALGVLC*AGRPGK
Trigger: CTTCCCCGGCCTCCCAGCCCAGCACAGAACCCCCAG...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGAAGCAGAGGGCTGTaGGGAGCCCTGGGCGCTAGG +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAGSRGL*GALGAR
Trigger: CCTAGCGCCCAGGGCTCCCCACAGCCCTCTGCTTCC...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGGAGGGCTGCTGCACCTaGGTGCGAACTTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGEGCCT*VRTSTV
Trigger: CACCGTGGAAGTTCGCACCCAGGTGCAGCAGCCCTC...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGAGCTGCCAATGGGGTaGAAGGGCTGGGCCCGACCC +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAELPMG*KGWARP
Trigger: GGGTCGGGCCCAGCCCTTCCACCCCATTGGCAGCTC...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGGCCCCAGTGAGGCCCTaGCCCTGGGTTGTTTCACAC +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGAPVRP*PWVVSH
Trigger: GTGTGAAACAACCCAGGGCCAGGGCCTCACTGGGGC...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGGCATGTCGGCCCGGCTaGCACCCGGTGGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLACRPG*HPVALG
Trigger: CCCCAGGGCCACCGGGTGTCAGCCGGGCCGACATGC...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGTACTGATAGGCGGTaGGGGGCCCCACGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAGTDRR*GAPRSR
Trigger: CCTGGAACGTGGGGCCCCTCACCGCCTATCAGTACC...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAAAAGGCCAAAGTCGGTaGGGGGAGGCGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAKGQSR*GEALVG
Trigger: GCCCACCAGCGCCTCCCCTCACCGACTTTGGCCTTT...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCACAGGCCCAGCAGGGCTaGTGCTGTGGCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAQAQQG*CCGCHC
Trigger: ACAGTGGCAGCCACAGCAGCAGCCCTGCTGGGCCTG...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGCTGATGGTGAGGTCTaGCATGCGCAGCCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAADGEV*HAQPPL
Trigger: GAGCGGCGGCTGCGCATGGCAGACCTCACCATCAGC...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCCACCAGCCGGTGGCCTaGACCCAGTGCACAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPAHQPVA*TQCTVP
Trigger: GGGGACTGTGCACTGGGTGCAGGCCACCGGCTGGTG...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGAAGGCACGCAGGCGGTaGTTGCTGCTGGTGAAACGC +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGKARRR*LLLVKR
Trigger: GCGTTTCACCAGCAGCAACCACCGCCTGCGTGCCTT...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCGGTGGCAGGGATAGGTaGGGAGTGGCAGCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPAGGRDR*GVAAGA
Trigger: GGCTCCCGCTGCCACTCCCCACCTATCCCTGCCACC...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCACTTCCTGGGTGGCCGTaGTGGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQALPGWP*WWWWWW
Trigger: CCACCACCACCACCACCACCACGGCCACCCAGGAAG...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGGGCTGTGGGGAGCCCTaGGCGCTAGGGGCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRGCGEP*ALGAAE
Trigger: CTCAGCGGCCCCTAGCGCCCAGGGCTCCCCACAGCC...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGACGGGGGTGTGGGCTaGGCAGAAGGTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQADGGVG*AEGAGA
Trigger: AGCTCCTGCACCTTCTGCCCAGCCCACACCCCCGTC...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGCCGGCTGACACCCGGTaGCCCTGGGGCTTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRPADTR*PWGFLP
Trigger: CGGGAGGAAGCCCCAGGGCCACCGGGTGTCAGCCGG...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGCCAGGCATGTGCTGGTaGCCCCGCGGCGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSPGMCW*PRGALR
Trigger: GCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGG...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCGAGCTGCCAATGGGGTaGAAGGGCTGGGCCCGACCC +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPAELPMG*KGWARP
Trigger: GGGTCGGGCCCAGCCCTTCCACCCCATTGGCAGCTC...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCGGTGAGGGGAGGCGCTaGTGGGCGAGGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGGEGRR*WARGCQ
Trigger: CTGGCAGCCCCTCGCCCACCAGCGCCTCCCCTCACC...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGGTCGGGTCGGGAGTaGGGGGACTGGTCCGAGAAA +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAGSGRE*GDWSEK
Trigger: TTTCTCGGACCAGTCCCCCCACTCCCGACCCGACCC...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGCCCAGGCGGCCATGGTaGGAGACCTCCAGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRPRRPW*ETSSAG
Trigger: TCCCGCGCTGGAGGTCTCTCACCATGGCCGCCTGGG...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGTCTCGCAAGCCCGGCTaGTCTCTTCTAGCACCTCAG +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGSRKPG*SLLAPQ
Trigger: CTGAGGTGCTAGAAGAGATCAGCCGGGCTTGCGAGA...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGGCGAGCCACGTTCCATaGCACGTGAATCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGASHVP*HVNHGH
Trigger: GTGCCCATGATTCACGTGTCATGGAACGTGGCTCGC...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCGGCAAAGGCTTCCCGTaGAGCGCGGGCCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGGKGFP*SAGPWR
Trigger: CCTCCAGGGGCCCGCGCTGCACGGGAAGCCTTTGCC...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGGGTGCCCAGAACTACTaGCATGTGAAGGGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGGAQNY*HVKGVG
Trigger: CCCTACCCCCTTCACATGGCAGTAGTTCTGGGCACC...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGCGTGGCTCAGCATGTTaGCCGTGGATGTTACCCGCA +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGRGSAC*PWMLPA
Trigger: TGCGGGTAACATCCACGGGCAACATGCTGAGCCACG...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGCGTTGCACCTGGCAGTaGTTCATGGACTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGRCTWQ*FMDCSR
Trigger: CCTGCTGCAGTCCATGAAGCACTGCCAGGTGCAACG...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAACAGACCACAGTGGGTaGGGTGGGCAGTGCTACGGG +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQATDHSG*GGQCYG
Trigger: CCCGTAGCACTGCCCACCCCACCCACTGTGGTCTGT...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGGATTCCAGCTTCCCATaGAGGGGTCTTGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGDSSFP*RGLGVG
Trigger: GCCCACTCCAAGACCCCTCCATGGGAAGCTGGAATC...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGGGGGACCTCCCCGCTTaGCTCCATAGTTCCGTTTGT +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGGDLPA*LHSSVC
Trigger: ACAAACGGAACTATGGAGCCAAGCGGGGAGGTCCCC...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
71% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCAGCGCCGGGAATGCCTaGGTTCGGCTCCACGCCCCG +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGSAGNA*VRLHAP
Trigger: CGGGGCGTGGAGCCGAACCCAGGCATTCCCGGCGCT...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCGGGATAGGTGGGGAGTaGCAGCGGGAGCCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPAGIGGE*QREPPR
Trigger: TCTTGGGGGCTCCCGCTGCCACTCCCCACCTATCCC...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCACTCTGCTGTGTCCACTaGGTCGGCTGGGTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQALCCVH*VGWVSG
Trigger: GCCACTGACCCAGCCGACCCAGTGGACACAGCAGAG...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCAGGCTGACGGGGGTGTaGGCTGGGCAGAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPARLTGV*AGQKVQ
Trigger: CTGCACCTTCTGCCCAGCCCACACCCCCGTCAGCCT...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGAAAGTTGGCCGGGGCTaGGAAGGACGGGGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGKVGRG*EGRGSF
Trigger: AAAGGAACCCCGTCCTTCCCAGCCCCGGCCAACTTT...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCCTGCCCAATGCTGGCTaGGCATCTGCCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPALPNAG*ASASRQ
Trigger: CTGCCTGGAGGCAGATGCTCAGCCAGCATTGGGCAG...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGAGGGAACCCGTATGTaGCCCCCGCCGCCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAEGTRM*PPPPPE
Trigger: CTCCGGCGGCGGCGGGGGTCACATACGGGTTCCCTC...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCCAGAGCTGGGCCTGCTaGAGTCGGCCAATGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGQSWAC*SRPMRG
Trigger: GCCCCGCATTGGCCGACTGCAGCAGGCCCAGCTCTG...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGTTTCCGACTGCTGTGTaGCGAGGGCCCCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSFPTAV*RGPQAA
Trigger: GGCCGCCTGGGGCCCTCGGCACACAGCAGTCGGAAA...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCTTTCCGACTGCTGTGTaGCGAGGGCCCCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGFPTAV*RGPQAA
Trigger: GGCCGCCTGGGGCCCTCGGCACACAGCAGTCGGAAA...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCGGCCTGGCGTTCGGCTaGCGGGCACCTTCATGTACA +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPAGLAFG*RAPSCT
Trigger: TGTACATGAAGGTGCCCGGCAGCCGAACGCCAGGCC...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCCACCAGCCGGTGGCCTaGACCCAGTGCACAGTCCCC +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGHQPVA*TQCTVP
Trigger: GGGGACTGTGCACTGGGTGCAGGCCACCGGCTGGTG...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGAGCACCACCACGCCCTaGAGGCCTGCGCTGCGGCGC +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRASTTTP*RPALRR
Trigger: GCGCCGCAGCGCAGGCCTGCAGGGCGTGGTGGTGCT...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGTGGCCCCAGGAGCCCTaGAGATTGGGCACGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLWPQEP*RLGTAP
Trigger: GGGGGCCGTGCCCAATCTCCAGGGCTCCTGGGGCCA...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGCCCATGGAGGGGTCTTaGAGTGGGCGCCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRPMEGS*SGRPWS
Trigger: GCTCCAGGGGCGCCCACTCCAAGACCCCTCCATGGG...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCTCCCAAAGCCCTGGCTaGGCTGGCTCCCGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPASQSPG*AGSRSN
Trigger: ATTGCTCCGGGAGCCAGCCCAGCCAGGGCTTTGGGA...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCGCTGGCTCCTCAAACTaGTCCTCCAGCGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPAAGSSN*SSSGVG
Trigger: CCCCACTCCGCTGGAGGACCAGTTTGAGGAGCCAGC...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGCGTACTTGGCAATGGTaGTGTGGGAACGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGRTWQW*CGNGSS
Trigger: AGAGCTCCCGTTCCCACACCACCATTGCCAAGTACG...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGCCACTCGCAGTCGCCTaGGCCAATGTTGATGTTGAC +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGPLAVA*ANVDVD
Trigger: GTCAACATCAACATTGGCCCAGGCGACTGCGAGTGG...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGCCTGGCAGTGCTTCATaGACTGCAGCAGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGPGSAS*TAAGRT
Trigger: AGTTCTGCCTGCTGCAGTCCATGAAGCACTGCCAGG...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGGCGGGCAGGATGGCTTaGGGGTGTGGGAGGTCGGGT +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSAGRMA*GCGRSG
Trigger: ACCCGACCTCCCACACCCCCAAGCCATCCTGCCCGC...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCGGAGGCCAAGGATTTaGGCAGGCTGGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLRRPRI*AGWPGW
Trigger: CCAGCCCGGCCAGCCTGCTCAAATCCTTGGCCTCCG...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGTGGCTGGGGCCAGCGTaGAGGCGTCGTAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLWLGPA*RRRRPE
Trigger: CTCAGGCCTACGACGCCTTCACGCTGGCCCCAGCCA...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448097.7
CDS-3UTR GCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGGGGTGGGGTGGGCAGTaGTACGGGGCTGGCATGTTG +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRGWGGQ*YGAGML
Trigger: CAACATGCCAGCCCCGTAGCACTGCCCACCCCACCC...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCACTACCCCCAGATGGCTaGCTCAGTCCTTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQALPPDG*LSPFTA
Trigger: GGCTGTGAAAGGACTGAGGCAGCCATCTGGGGGTAG...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCGCGGGGGCTGCCCAATaGTGGCTGAGCATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGAGAAQ*WLSICL
Trigger: GAGGCAGATGCTCAGCCAGCATTGGGCAGCCCCCGC...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAAGCAAGTTCCACACTTaGTCCAGTGGGGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQASKFHT*SSGGRT
Trigger: GGTCCTGCCCCCACTGGAGCAAGTGTGGAACTTGCT...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGCAGTCTGTTCAGAGTTaGAGCCTCTCCTTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGQSVQS*SLSFAC
Trigger: GCAAGCGAAGGAGAGGCTGCAACTCTGAACAGACTG...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGACCAGTGTTGCTGCTaGTGCTACTGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQADQCCC*CYCCCW
Trigger: CCAGCAGCAGCAGTAGCAGCAGCAGCAACACTGGTC...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGGTCGCCGCTTACAGCTaGCTGACACTGCCGCCACCC +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSVAAYS*LTLPPP
Trigger: GGGTGGCGGCAGTGTCAGGCAGCTGTAAGCGGCGAC...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGGCTGATGGTGAGGTCTaGCATGCGCAGCCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSADGEV*HAQPPL
Trigger: GAGCGGCGGCTGCGCATGGCAGACCTCACCATCAGC...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCGGGGCAGAGAGACAGTaGAGTGCGAGGGTGCGGGAC +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGGAERQ*SARVRD
Trigger: GTCCCGCACCCTCGCACTGCACTGTCTCTCTGCCCC...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGCCTGCCCCAGCTCTCTaGGACGATGGTCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRPAPAL*DDGPAP
Trigger: TGGAGCCGGACCATCGTCCCAGAGAGCTGGGGCAGG...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGATTCCAGCTTCCCATaGAGGGGTCTTGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQADSSFP*RGLGVG
Trigger: GCCCACTCCAAGACCCCTCCATGGGAAGCTGGAATC...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCACTGCTGGTGAAACGCTaGAGTCCATCCGCGACCTCT +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQALLVKR*SPSATS
Trigger: AGAGGTCGCGGATGGACTCCAGCGTTTCACCAGCAG...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGAGCGCCGGGAATGCCTaGGTTCGGCTCCACGCCCCG +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRASAGNA*VRLHAP
Trigger: CGGGGCGTGGAGCCGAACCCAGGCATTCCCGGCGCT...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGTCCTTCAGCGGGGGTTaGGGGGCCACGCCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLSFSGG*GATPAS
Trigger: CGAAGCAGGCGTGGCCCCCCAACCCCCGCTGAAGGA...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGCTTCCTGGGTGGCCGTaGTGGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRLPGWP*WWWWWW
Trigger: CCACCACCACCACCACCACCACGGCCACCCAGGAAG...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGAGGGCCCAGGCCGGGTaGAAACAGCTGCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRRAQAG*KQLLQS
Trigger: GGACTGGAGCAGCTGTTTCCACCCGGCCTGGGCCCT...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCGGGAATACTGAGTGGTaGGCAAGGGCCCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGGNTEW*ARAQAG
Trigger: CCCGGCCTGGGCCCTTGCCCACCACTCAGTATTCCC...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGGTCCACTGGGTCGGCTaGGTCAGTGGCACTCCGGCC +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLVHWVG*VSGTPA
Trigger: GGCCGGAGTGCCACTGACCCAGCCGACCCAGTGGAC...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGTGGGTGGCTTGGCCTTaGAGGCCCCGCCAAGATCGG +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSWVAWP*RPRQDR
Trigger: CCGATCTTGGCGGGGCCTCCAAGGCCAAGCCACCCA...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCGAGCTGTGGGTGGCTTaGCCTTGGAGGCCCCGCCAA +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGELWVA*PWRPRQ
Trigger: TTGGCGGGGCCTCCAAGGCCAAGCCACCCACAGCTC...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGGACGGGGGTGTGGGCTaGGCAGAAGGTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSDGGVG*AEGAGA
Trigger: AGCTCCTGCACCTTCTGCCCAGCCCACACCCCCGTC...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCAGGCTGACGGGGGTGTaGGCTGGGCAGAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGRLTGV*AGQKVQ
Trigger: CTGCACCTTCTGCCCAGCCCACACCCCCGTCAGCCT...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGTGGAAGGATGAGGCCTaGTACTGTGCGTACTTGGCA +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGWKDEA*YCAYLA
Trigger: TGCCAAGTACGCACAGTACCAGGCCTCATCCTTCCA...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCATTCTCCTGGTGGCCTaGCGTTCGGCTGCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGILLVA*RSAAGH
Trigger: GTGCCCGGCAGCCGAACGCCAGGCCACCAGGAGAAT...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGGAGGGGCGGGCAGGATaGCTTGGGGGTGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLEGRAG*LGGVGG
Trigger: ACCTCCCACACCCCCAAGCCATCCTGCCCGCCCCTC...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGACCCTCAGGTGGGGCTaGGGTCGGGTCGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRATLRWG*GRVGSG
Trigger: CCCACTCCCGACCCGACCCCAGCCCCACCTGAGGGT...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGCTGCCCAATGCTGGCTaGGCATCTGCCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRLPNAG*ASASRQ
Trigger: CTGCCTGGAGGCAGATGCTCAGCCAGCATTGGGCAG...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGCGCCTGAAGCTTCCTaGGGTATTTTGGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAAPEAS*GILVAG
Trigger: TCCTGCCACCAAAATACCTCAGGAAGCTTCAGGCGC...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGCGCCGATGCTCCTTCTaGTGCTCCTTCTGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSRRCSF*CSFCRR
Trigger: GCGGCGACAGAAGGAGCATCAGAAGGAGCATCGGCG...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGTGGGCACGATGGATTTaGCGTTCTTCACCTCATTCC +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGWARWI*RSSPHS
Trigger: GGAATGAGGTGAAGAACGTCAAATCCATCGTGCCCA...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCGCGAGCCACGTTCCATaGCACGTGAATCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPAASHVP*HVNHGH
Trigger: GTGCCCATGATTCACGTGTCATGGAACGTGGCTCGC...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGAGGCTGGCTCGTCCTTaGCACGGCCCTGGTAAGCGA +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSRLARP*HGPGKR
Trigger: TCGCTTACCAGGGCCGTGTCAAGGACGAGCCAGCCT...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGGGGTCCACTGCCCGATaGATCCAGCCAGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRGSTAR*IQPGQQ
Trigger: CTGCTGACCTGGCTGGATGCATCGGGCAGTGGACCC...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGTCCATCCTCTCGGGCTaGCCGGCAGGCCGGACCCTT +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRASILSG*PAGRTL
Trigger: AAGGGTCCGGCCTGCCGGGCAGCCCGAGAGGATGGA...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGCTTGGCCTTGGCCTTTaGCCTGCCCTCACGGGGCCG +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRALGLGL*PALTGP
Trigger: CGGCCCCGTGAGGGCAGGGCAAAGGCCAAGGCCAAG...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGAGAAGGCATCCCGTTTaGTCTCCAGATAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGRRHPV*SPDRCW
Trigger: CCAGCATCTATCTGGAGAGCAAACGGGATGCCTTCT...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGTCAGTAACAGCCAGATaGAGTTTGGTGTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGSVTAR*SLVCPV
Trigger: GACAGGGCACACCAAACTCCATCTGGCTGTTACTGA...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGGGGGCTGCCCAATGCTaGCTGAGCATCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSGAAQC*LSICLQ
Trigger: CTGGAGGCAGATGCTCAGCCAGCATTGGGCAGCCCC...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGAAGCCCTGGCTGGGCTaGCTCCCGGAGCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLKPWLG*LPEQCL
Trigger: CAGGCATTGCTCCGGGAGCCAGCCCAGCCAGGGCTT...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGCTGGGGGTTCTGTGCTaGGCTGGGAGGCCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRALGVLC*AGRPGK
Trigger: CTTCCCCGGCCTCCCAGCCCAGCACAGAACCCCCAG...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGTCCTTCAGCGGGGGTTaGGGGGCCACGCCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRASFSGG*GATPAS
Trigger: CGAAGCAGGCGTGGCCCCCCAACCCCCGCTGAAGGA...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGTCCACTGGGTCGGCTaGGTCAGTGGCACTCCGGCC +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAVHWVG*VSGTPA
Trigger: GGCCGGAGTGCCACTGACCCAGCCGACCCAGTGGAC...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCATTTCTTTGGGGACCTTaGCCTTGGCCTTTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAFLWGP*PWPLPC
Trigger: GCAGGGCAAAGGCCAAGGCCAAGGTCCCCAAAGAAA...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGGCTGGAGCTGTGGGTaGCTTGGCCTTGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAGWSCG*LGLGGP
Trigger: GGGGCCTCCAAGGCCAAGCCACCCACAGCTCCAGCC...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCACGTCAGCAGCACAGTaGCTGATGGTGAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPATSAAQ*LMVRSA
Trigger: GGCAGACCTCACCATCAGCCACTGTGCTGCTGACGT...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCCCTTGGCATTCCTGCTaGCGCGCACGACGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGPWHSC*RARRQQ
Trigger: CTGCTGACGTCGTGCGCGCCAGCAGGAATGCCAAGG...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGGCTGGCATGTTGCCCTaGGGGGAACCTGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSAGMLP*GEPGSG
Trigger: CCCAGAACCAGGTTCCCCCCAGGGCAACATGCCAGC...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448097.7
CDS-3UTR TCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGGGTGGTTGCTGCTGGTaGAACGCTGGAGTCCATCCG +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSGGCCW*NAGVHP
Trigger: CGGATGGACTCCAGCGTTTCACCAGCAGCAACCACC...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCACCTGAGGTAGAGAACTaGGATGACGAGGAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAPEVEN*DDEEAE
Trigger: CTCTGCTTCCTCGTCATCTCAGTTCTCTACCTCAGG...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCGGGCCCCTCACTAAGTaGGCGCAGCTTCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGGPLTK*AQLQHV
Trigger: GACATGCTGAAGCTGCGCTCACTTAGTGAGGGGCCC...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCGGCCCCGGATCACTGTaGTGGGATTTCGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGGPGSL*WDFEGL
Trigger: CAGACCCTCGAAATCCCATCACAGTGATCCGGGGCC...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGGGGTCCACTGCCCGATaGATCCAGCCAGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLGSTAR*IQPGQQ
Trigger: CTGCTGACCTGGCTGGATGCATCGGGCAGTGGACCC...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGGCAGGAAGCGGGGGCTaGCCAATGCTGGCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLAGSGG*PMLAEH
Trigger: ATGCTCAGCCAGCATTGGGCAGCCCCCGCTTCCTGC...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGTTCCAGAGCTGGGCCTaGTGCAGTCGGCCAATGCGG +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLFQSWA*CSRPMR
Trigger: CCGCATTGGCCGACTGCAGCAGGCCCAGCTCTGGAA...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGCCCCAGGCATCTCCATaGAGGGTACTCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSPQASP*RVLHSP
Trigger: AGGGCTGTGGAGTACCCTGCATGGAGATGCCTGGGG...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGCCCCAGGCATCTCCATaGAGGGTACTCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRPQASP*RVLHSP
Trigger: AGGGCTGTGGAGTACCCTGCATGGAGATGCCTGGGG...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGAGAACGGTTTCCGACTaGTGTGTGCCGAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRRTVSD*CVPRAP
Trigger: TGGGGCCCTCGGCACACAGCAGTCGGAAACCGTTCT...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGCAGGCCCAGCAGGGCTaGTGCTGTGGCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAQAQQG*CCGCHC
Trigger: ACAGTGGCAGCCACAGCAGCAGCCCTGCTGGGCCTG...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCTCACAAGGCCAGATCTaGCGAGTGCCTGTCAGATCC +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPASQGQI*RVPVRS
Trigger: GGATCTGACAGGCACTCGGCAGATCTGGCCTTGTGA...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCCTACAGTACAGGAGTTaGTCACCCTCAGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPALQYRS*SPSGGA
Trigger: AGCCCCACCTGAGGGTGAGCAACTCCTGTACTGTAG...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGGGAGGGGTCTTGGAGTaGGCGCCCCTGGAGCATAAT +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSGGVLE*APLEHN
Trigger: ATTATGCTCCAGGGGCGCCCACTCCAAGACCCCTCC...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGCTGTTCCCAAAGCCCTaGCTGGGCTGGCTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRALFPKP*LGWLPE
Trigger: CTCCGGGAGCCAGCCCAGCCAGGGCTTTGGGAACAG...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCCACACTTGCTCCAGTaGGGGCAGGACCTTGGCTCG +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLPHLLQ*GQDLGS
Trigger: CGAGCCAAGGTCCTGCCCCCACTGGAGCAAGTGTGG...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGCACAGGCTGCACCACTaGGGGTTCAGCAGCTCGCTT +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRHRLHH*GFSSSL
Trigger: AAGCGAGCTGCTGAACCCCCAGTGGTGCAGCCTGTG...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGAGTGCCGCTGCTCCTaGCGCTCTGGGGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAECRCS*RSGGAE
Trigger: TTCAGCACCCCCAGAGCGCCAGGAGCAGCGGCACTC...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCGGTGTACGCTGGAGCTaGGTATGGATATGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPAGVRWS*VWIWVR
Trigger: CCTCACCCATATCCATACCCAGCTCCAGCGTACACC...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGAAGGCACGCAGGCGGTaGTTGCTGCTGGTGAAACGC +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSKARRR*LLLVKR
Trigger: GCGTTTCACCAGCAGCAACCACCGCCTGCGTGCCTT...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGTGCTACTGCTGCTGCTaGTGGTGGTGCCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRACYCCC*WWCRGG
Trigger: GCCTCCCCGGCACCACCACCAGCAGCAGCAGTAGCA...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGGGATAGGTGGGGAGTaGCAGCGGGAGCCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAGIGGE*QREPPR
Trigger: TCTTGGGGGCTCCCGCTGCCACTCCCCACCTATCCC...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGCCTCTTCCTTGCGAATaGATTCGTCCAGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGPLPCE*IRPASS
Trigger: TGAAGATGCTGGACGAATCCATTCGCAAGGAAGAGG...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCCTTGGCATTCCTGCTaGCGCGCACGACGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLPWHSC*RARRQQ
Trigger: CTGCTGACGTCGTGCGCGCCAGCAGGAATGCCAAGG...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCATTGGCAATGGTGGTGTaGGAACGGGAGCTCTCACAA +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQALAMVV*ERELSQ
Trigger: TTGTGAGAGCTCCCGTTCCCACACCACCATTGCCAA...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCCGTACTTGGCAATGGTaGTGTGGGAACGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPARTWQW*CGNGSS
Trigger: AGAGCTCCCGTTCCCACACCACCATTGCCAAGTACG...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGATTCTCCTGGTGGCCTaGCGTTCGGCTGCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAILLVA*RSAAGH
Trigger: GTGCCCGGCAGCCGAACGCCAGGCCACCAGGAGAAT...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAAAGTTGTTATTCTCCTaGTGGCCTGGCGTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAKLLFS*WPGVRL
Trigger: CAGCCGAACGCCAGGCCACCAGGAGAATAACAACTT...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCCTCACTATCGTGCTCTaGCTCGTACAGTTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPALTIVL*LVQLPK
Trigger: CTTGGGCAACTGTACGAGTCAGAGCACGATAGTGAG...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGGGCTCTCCGGGCGCCTaGAGCTTCCTGAGGTATTTT +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRGSPGA*SFLRYF
Trigger: AAAATACCTCAGGAAGCTTCAGGCGCCCGGAGAGCC...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGGGCTCTCCGGGCGCCTaGAGCTTCCTGAGGTATTTT +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSGSPGA*SFLRYF
Trigger: AAAATACCTCAGGAAGCTTCAGGCGCCCGGAGAGCC...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCACATCAGGTAGGATCTTaGATTCGGCTGGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAHQVGS*IRLAPQ
Trigger: TTGAGGAGCCAGCCGAATTCAAGATCCTACCTGATG...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGGCATGTCGGCCCGGCTaGCACCCGGTGGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWACRPG*HPVALG
Trigger: CCCCAGGGCCACCGGGTGTCAGCCGGGCCGACATGC...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCATGGGCACGATGGATTTaGCGTTCTTCACCTCATTCC +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAWARWI*RSSPHS
Trigger: GGAATGAGGTGAAGAACGTCAAATCCATCGTGCCCA...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGAGGCTGGCTCGTCCTTaGCACGGCCCTGGTAAGCGA +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRARLARP*HGPGKR
Trigger: TCGCTTACCAGGGCCGTGTCAAGGACGAGCCAGCCT...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGGGTGCCCAGAACTACTaGCATGTGAAGGGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRGAQNY*HVKGVG
Trigger: CCCTACCCCCTTCACATGGCAGTAGTTCTGGGCACC...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCGCCTGCACACAGCCATaGAGGGATTCCAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGACTQP*RDSSFP
Trigger: TGGGAAGCTGGAATCCCTGCATGGCTGTGTGCAGGC...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCGACCAGTGTTGCTGCTaGTGCTACTGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGDQCCC*CYCCCW
Trigger: CCAGCAGCAGCAGTAGCAGCAGCAGCAACACTGGTC...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGCTGTTCCTCTTCCTTaGGAATGGATTCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAAVPLP*EWIRPA
Trigger: TGCTGGACGAATCCATTCGCAAGGAAGAGGAACAGC...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCGGGTCTGTACAGAACTaGAGCAGGACAGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPAGSVQN*SRTGEK
Trigger: CTTCTCACCTGTCCTGCTGCAGTTCTGTACAGACCC...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCATCTGAGGGCTGCTaGACCTGGGTGCGAACTTCC +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRSSEGC*TWVRTS
Trigger: GGAAGTTCGCACCCAGGTGCAGCAGCCCTCAGATGA...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGCGTGGCTCAGCATGTTaGCCGTGGATGTTACCCGCA +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRRGSAC*PWMLPA
Trigger: TGCGGGTAACATCCACGGGCAACATGCTGAGCCACG...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGGCTGCACCGTGTTCATaGCCAGGATGGTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLAAPCS*PGWCGP
Trigger: TGGGCCACACCATCCTGGGCATGAACACGGTGCAGC...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGACCAGGCTCTCGCGTTaGACCTGGCAGTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRTRLSR*TWQCFM
Trigger: CATGAAGCACTGCCAGGTGCAACGCGAGAGCCTGGT...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGTCCAGCCCAGGCATGTaGTGGTGGCCCCGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRSSPGM*WWPRGA
Trigger: GGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGA...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGACAGACCACAGTGGGTaGGGTGGGCAGTGCTACGGG +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRATDHSG*GGQCYG
Trigger: CCCGTAGCACTGCCCACCCCACCCACTGTGGTCTGT...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGGGAGGGGTCTTGGAGTaGGCGCCCCTGGAGCATAAT +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLGGVLE*APLEHN
Trigger: ATTATGCTCCAGGGGCGCCCACTCCAAGACCCCTCC...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGCTGTGGGGAGCCCTaGGCGCTAGGGGCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRGCGEP*ALGAAE
Trigger: CTCAGCGGCCCCTAGCGCCCAGGGCTCCCCACAGCC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGCATGGGGCCCGGGACTaGCTCTTCGCCCGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRHGARD*LFARPA
Trigger: CGCAGGGCGGGCGAAGAGCCAGTCCCGGGCCCCATG...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCTGGAAGGATGAGGCCTaGTACTGTGCGTACTTGGCA +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPAWKDEA*YCAYLA
Trigger: TGCCAAGTACGCACAGTACCAGGCCTCATCCTTCCA...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCTTGTTATTCTCCTGGTaGCCTGGCGTTCGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGLLFSW*PGVRLP
Trigger: CGGCAGCCGAACGCCAGGCCACCAGGAGAATAACAA...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCGTTGCAGTAGTAGGCTaGCTCGTCCTTGACACGGCC +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGVAVVG*LVLDTA
Trigger: GGCCGTGTCAAGGACGAGCCAGCCTACTACTGCAAC...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGTGAGGGGAGGCGCTaGTGGGCGAGGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRGEGRR*WARGCQ
Trigger: CTGGCAGCCCCTCGCCCACCAGCGCCTCCCCTCACC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCCGCCGCCGGAGCCTaGTCCTTGTGTCTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAAAAGA*SLCLLL
Trigger: TAGCAACAGACACAAGGACCAGGCTCCGGCGGCGGC...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGGGCCGCTCCGCCCAGTaGCGCAGTTGGATTTTCCAA +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLGRSAQ*RSWIFQ
Trigger: TTGGAAAATCCAACTGCGCCACTGGGCGGAGCGGCC...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448097.7
CDS-3UTR TCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCGCGCCTGAAGCTTCCTaGGGTATTTTGGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGAPEAS*GILVAG
Trigger: TCCTGCCACCAAAATACCTCAGGAAGCTTCAGGCGC...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGCGTCCAGCATCTTCATaGTGTTGGCCAGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSRPASS*CWPAHQ
Trigger: CTGATGGGCTGGCCAACATCATGAAGATGCTGGACG...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGTGGATGTTACCCGCATaGAGGCGGGCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLWMLPA*RRAASA
Trigger: TGCTGAAGCTGCCCGCCTTCATGCGGGTAACATCCA...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGAGAACGGTTTCCGACTaGTGTGTGCCGAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRARTVSD*CVPRAP
Trigger: TGGGGCCCTCGGCACACAGCAGTCGGAAACCGTTCT...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGTGTTGCTGTTGCTACTaGTGGTGGTTGGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSCCCCY*WWLGLG
Trigger: CCCCAACCCCAACCACCAGCAGTAGCAACAGCAACA...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTGCCACTGTTGCTGTTaGTACTGCTGGTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRCHCCC*YCWWLG
Trigger: CCCCAACCACCAGCAGTAGCAACAGCAACAGTGGCA...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGGGCTGCTGCTGTGGCTaGCACTGTTGCTGTTGCTAC +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLGCCCG*HCCCCY
Trigger: GTAGCAACAGCAACAGTGGCAGCCACAGCAGCAGCC...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCAGAAGGCATCCCGTTTaGTCTCCAGATAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPARRHPV*SPDRCW
Trigger: CCAGCATCTATCTGGAGAGCAAACGGGATGCCTTCT...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTTCTCATCTGAGGGCTaGTGCACCTGGGTGCGAACT +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRFSSEG*CTWVRT
Trigger: AGTTCGCACCCAGGTGCAGCAGCCCTCAGATGAGAA...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGGAGGGGTTCCAGTGGTaGTGTCTGGCTCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLEGFQW*CLAPLT
Trigger: AGTCAGAGGAGCCAGACAGCACCACTGGAACCCCTC...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGAGCACCACCACGCCCTaGAGGCCTGCGCTGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWSTTTP*RPALRR
Trigger: GCGCCGCAGCGCAGGCCTGCAGGGCGTGGTGGTGCT...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTTAAGTGAGGGGAGCTaGCAATGGGGTGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRLSEGS*QWGGRA
Trigger: AGCCCTTCCACCCCATTGGCAGCTCCCCTCACTTAA...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGCTACAGTACAGGAGTTaGTCACCCTCAGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRLQYRS*SPSGGA
Trigger: AGCCCCACCTGAGGGTGAGCAACTCCTGTACTGTAG...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGTGTGCCCTGTCTCATTaGAACCACCACCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSCALSH*NHHPSS
Trigger: ACTGCTGGGGTGGTGGTTCCAATGAGACAGGGCACA...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGTGTGGTAGCAGCGTGTaGCCTCCTCACTATCGTGCT +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSCGSSV*PPHYRA
Trigger: AGCACGATAGTGAGGAGGCCACACGCTGCTACCACA...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGGGTGTACGCTGGAGCTaGGTATGGATATGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRGVRWS*VWIWVR
Trigger: CCTCACCCATATCCATACCCAGCTCCAGCGTACACC...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGCAGGGGTACAAGAGGTaGGTCCTGGGGGTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAQGYKR*VLGVLC
Trigger: GCACAGAACCCCCAGGACCCACCTCTTGTACCCCTG...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGAGTCCCACTGTCCGCTaGCTCTGCTGTGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRASPTVR*LCCVHW
Trigger: CCAGTGGACACAGCAGAGCCAGCGGACAGTGGGACT...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGACTTCCCTTTCACCTTaGCATTCCTGCTGGCGCGCA +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSTSLSP*HSCWRA
Trigger: TGCGCGCCAGCAGGAATGCCAAGGTGAAAGGGAAGT...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCCTTCCACCAGGGTCTTaGTGGAGAAGAGGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGLPPGS*WRRGPS
Trigger: ACTTGGGCCTCTTCTCCACCAAGACCCTGGTGGAAG...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGGTGCGTACTTGGCAATaGTGGTGTGGGAACGGGAGC +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLVRTWQ*WCGNGS
Trigger: GCTCCCGTTCCCACACCACCATTGCCAAGTACGCAC...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCCCTGGCAGTGCTTCATaGACTGCAGCAGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGPGSAS*TAAGRT
Trigger: AGTTCTGCCTGCTGCAGTCCATGAAGCACTGCCAGG...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGAGCCCAGGCATGTGCTaGTGGCCCCGCGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRSPGMC*WPRGAL
Trigger: CAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGGATGGCTTGGGGGTGTaGGAGGTCGGGTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLDGLGV*EVGFSQ
Trigger: TTGGGAAAACCCGACCTCCCACACCCCCAAGCCATC...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGTCCATCCGCGACCTCTaGACTCTGCTCTCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLSIRDL*TLLSLR
Trigger: CCTTAGAGAGAGCAGAGTTCAGAGGTCGCGGATGGA...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGATCCCAGTTCTCATCTaGGGGCTGCTGCACCTGGGT +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAIPVLI*GLLHLG
Trigger: ACCCAGGTGCAGCAGCCCTCAGATGAGAACTGGGAT...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGGATCACAGAAAGCGCTaGTGGTCTCCCAGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSDHRKR*WSPSSA
Trigger: AGCACTACTGGGAGACCATCAGCGCTTTCTGTGATC...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGGGCAAAGGCTTCCCGTaGAGCGCGGGCCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWGKGFP*SAGPWR
Trigger: CCTCCAGGGGCCCGCGCTGCACGGGAAGCCTTTGCC...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGGCCTCCTCACTATCGTaGTCTGACTCGTACAGTTGC +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRASSLS*SDSYSC
Trigger: GCAACTGTACGAGTCAGAGCACGATAGTGAGGAGGC...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGCTGCAGTCGGCCAATaGGGGGCCCCAGCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRAAVGQ*GAPAQR
Trigger: TCGCTGAGCTGGGGCCCCGCATTGGCCGACTGCAGC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGTGTGGCTGCCACTGTTaGTGTTGCTACTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLCGCHC*CCYCWW
Trigger: CCACCAGCAGTAGCAACAGCAACAGTGGCAGCCACA...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCGGTACGTGTTGCGGCTaGCATTCTCACTTGTCACGA +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGGTCCG*HSHLSR
Trigger: TCGTGACAAGTGAGAATGGCAGCCGCAACACGTACC...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGCCACAGTGGGTGGGGTaGGCAGTGCTACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRPQWVG*AVLRGW
Trigger: CCAGCCCCGTAGCACTGCCCACCCCACCCACTGTGG...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGAGGAGCCCTGGAGATTaGGCACGGCCCCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRRSPGD*ARPPAP
Trigger: TGGGGCAGGGGGCCGTGCCCAATCTCCAGGGCTCCT...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGTGGCCCCAGGAGCCCTaGAGATTGGGCACGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWWPQEP*RLGTAP
Trigger: GGGGGCCGTGCCCAATCTCCAGGGCTCCTGGGGCCA...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGTGCAGCGCGGGCCCCTaGAGGGTCCACTGCCCGATG +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWCSAGP*RVHCPM
Trigger: CATCGGGCAGTGGACCCTCCAGGGGCCCGCGCTGCA...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCTGGAGTGGGCGCCCCTaGAGCATAATATGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGWSGRP*SIIWFA
Trigger: AGCAAACCATATTATGCTCCAGGGGCGCCCACTCCA...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGTGTGGTAGCAGCGTGTaGCCTCCTCACTATCGTGCT +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLCGSSV*PPHYRA
Trigger: AGCACGATAGTGAGGAGGCCACACGCTGCTACCACA...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGGGGACCTCCCCGCTTaGCTCCATAGTTCCGTTTGT +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAGDLPA*LHSSVC
Trigger: ACAAACGGAACTATGGAGCCAAGCGGGGAGGTCCCC...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGCAGGCCAGGCAGGGGTaGTGGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRQARQG*WWWWWW
Trigger: CCACCACCACCACCACCACCACCCCTGCCTGGCCTG...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGAAGTTGTTATTCTCCTaGTGGCCTGGCGTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRKLLFS*WPGVRL
Trigger: CAGCCGAACGCCAGGCCACCAGGAGAATAACAACTT...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGGAGATCATCCAGGATTaGCCACCAGGAACCCGTCAA +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRREIIQD*PPGTRQ
Trigger: TTGACGGGTTCCTGGTGGCCAATCCTGGATGATCTC...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGCTCTCGCGTTGCACCTaGCAGTGCTTCATGGACTGC +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRALSRCT*QCFMDC
Trigger: GCAGTCCATGAAGCACTGCCAGGTGCAACGCGAGAG...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGTTGCAGTAGTAGGCTaGCTCGTCCTTGACACGGCC +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAVAVVG*LVLDTA
Trigger: GGCCGTGTCAAGGACGAGCCAGCCTACTACTGCAAC...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGAGGGGCGGGCAGGATaGCTTGGGGGTGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVREGRAG*LGGVGG
Trigger: ACCTCCCACACCCCCAAGCCATCCTGCCCGCCCCTC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCACGTTCCATGACACGTaGATCATGGGCACGATGGAT +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGTFHDT*IMGTMD
Trigger: ATCCATCGTGCCCATGATTCACGTGTCATGGAACGT...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGGGGCCCTCACCAGCGTaGAGGCGTCGTAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWGPSPA*RRRRPE
Trigger: CTCAGGCCTACGACGCCTTCACGCTGGTGAGGGCCC...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000254846.9
CDS-3UTR GCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGCCCTGGAGGGTCCACTaGCCGATGCATCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRPWRVH*PMHPAR
Trigger: CCTGGCTGGATGCATCGGGCAGTGGACCCTCCAGGG...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGGCCTCCTCACTATCGTaGTCTGACTCGTACAGTTGC +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLASSLS*SDSYSC
Trigger: GCAACTGTACGAGTCAGAGCACGATAGTGAGGAGGC...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGTCCATCCTCTCGGGCTaGCCGGCAGGCCGGACCCTT +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWSILSG*PAGRTL
Trigger: AAGGGTCCGGCCTGCCGGGCAGCCCGAGAGGATGGA...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGTGCCACTGTTGCTGTTaGTACTGCTGGTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRACHCCC*YCWWLG
Trigger: CCCCAACCACCAGCAGTAGCAACAGCAACAGTGGCA...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGCCTGCTTCGTGTTGTTaGTGTTCCTCTTCCTTGCGA +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSPASCC*CSSSLR
Trigger: TCGCAAGGAAGAGGAACAGCAACAACACGAAGCAGG...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGTCACAAGGCCAGATCTaGCGAGTGCCTGTCAGATCC +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRASQGQI*RVPVRS
Trigger: GGATCTGACAGGCACTCGGCAGATCTGGCCTTGTGA...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGCAGTGCTTCATGGACTaGAGCAGGCAGAACTTGATC +
Preference number: 4 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRQCFMD*SRQNLI
Trigger: GATCAAGTTCTGCCTGCTGCAGTCCATGAAGCACTG...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGTACAACAGACCACAGTaGGTGGGGTGGGCAGTGCTA +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAYNRPQ*VGWAVL
Trigger: TAGCACTGCCCACCCCACCCACTGTGGTCTGTTGTA...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGGTGGGGGCAGGACCTTaGCTCGGTGCTGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWVGAGP*LGAGRS
Trigger: GCTCCTGCCAGCACCGAGCCAAGGTCCTGCCCCCAC...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGCAGGCCAGGCAGGGGTaGTGGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWQARQG*WWWWWW
Trigger: CCACCACCACCACCACCACCACCCCTGCCTGGCCTG...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGCACCTCGGGGGTCTTTaGGAAGGAGACCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRHLGGL*EGDPGP
Trigger: CGGCCCAGGGTCTCCTTCCCAAAGACCCCCGAGGTG...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGGAATACTGAGTGGTaGGCAAGGGCCCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRGNTEW*ARAQAG
Trigger: CCCGGCCTGGGCCCTTGCCCACCACTCAGTATTCCC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGTTGGGTGGGGGTCATaGGGCCCGGGACTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRVGWGS*GPGLAL
Trigger: AAGAGCCAGTCCCGGGCCCCATGACCCCCACCCAAC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGAGGGGCTGGAGCTGTaGGTGGCTTGGCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVREGLEL*VAWPWR
Trigger: CCTCCAAGGCCAAGCCACCCACAGCTCCAGCCCCTC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGGACACCCGGTGGCCCTaGGGCTTCCTCCCGAGCCTT +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWDTRWP*GFLPSL
Trigger: AAGGCTCGGGAGGAAGCCCCAGGGCCACCGGGTGTC...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGGGTACTGTGCGTACTTaGCAATGGTGGTGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLGTVRT*QWWCGN
Trigger: GTTCCCACACCACCATTGCCAAGTACGCACAGTACC...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGGCGGGCAGGATGGCTTaGGGGTGTGGGAGGTCGGGT +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWAGRMA*GCGRSG
Trigger: ACCCGACCTCCCACACCCCCAAGCCATCCTGCCCGC...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGGTCGGGTCGGGAGTaGGGGGACTGGTCCGAGAAA +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRGSGRE*GDWSEK
Trigger: TTTCTCGGACCAGTCCCCCCACTCCCGACCCGACCC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCGTGAGGCCCTGGCCCTaGGTTGTTTCACACTTAAAA +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGVRPWP*VVSHLK
Trigger: TTTTAAGTGTGAAACAACCCAGGGCCAGGGCCTCAC...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
3UTR CAA 72 bp CCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTaGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PYVTPAAAGAWS*CLLLKRPKSVR
Trigger: CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGCTCACTATCGTGCTCTaGCTCGTACAGTTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRALTIVL*LVQLPK
Trigger: CTTGGGCAACTGTACGAGTCAGAGCACGATAGTGAG...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGGTATGGATATGGGTaGGGCAGCGAGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRGYGYG*GSECRC
Trigger: GCAGCGGCACTCGCTGCCTCACCCATATCCATACCC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCAGATGGAGTTTGGTGTaGCCTGTCTCATTGGAACCA +
Preference number: 4 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGRWSLV*PVSLEP
Trigger: TGGTTCCAATGAGACAGGGCACACCAAACTCCATCT...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGGCGGGGGCTGCCCAATaGTGGCTGAGCATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWAGAAQ*WLSICL
Trigger: GAGGCAGATGCTCAGCCAGCATTGGGCAGCCCCCGC...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGTATGGTTTGCTGGGGTaGCCAGAACTACTGCCATGT +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLYGLLG*PELLPC
Trigger: ACATGGCAGTAGTTCTGGGCACCCCAGCAAACCATA...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGTTCCAGAGCTGGGCCTaGTGCAGTCGGCCAATGCGG +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRFQSWA*CSRPMR
Trigger: CCGCATTGGCCGACTGCAGCAGGCCCAGCTCTGGAA...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGCTCTCCTTCTCCTCCTaGAGAGACTCCTGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRALSFSS*RDSWKD
Trigger: ATCCTTCCAGGAGTCTCTGCAGGAGGAGAAGGAGAG...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCACACAGGAATATTGGATaGATAGAGATCATCCAGGAT +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAHRNIG*IEIIQD
Trigger: ATCCTGGATGATCTCTATGCATCCAATATTCCTGTG...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGGTACGTGTTGCGGCTaGCATTCTCACTTGTCACGA +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAGTCCG*HSHLSR
Trigger: TCGTGACAAGTGAGAATGGCAGCCGCAACACGTACC...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAATTAAAAACCTCGGCTaGCGTAACGTCTATGTACAT +
Preference number: 4 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAIKNLG*RNVYVH
Trigger: ATGTACATAGACGTTACGGCAGCCGAGGTTTTTAAT...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGTCAGTAACAGCCAGATaGAGTTTGGTGTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLSVTAR*SLVCPV
Trigger: GACAGGGCACACCAAACTCCATCTGGCTGTTACTGA...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGCAATTCCGGCCTCCGTaGGAGCGTCCTCACACCGCG +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWQFRPP*ERPHTA
Trigger: CGCGGTGTGAGGACGCTCCCACGGAGGCCGGAATTG...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGCCCTGGAGCATAATATaGTTTGCTGGGGTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAPWSII*FAGVPR
Trigger: TCTGGGCACCCCAGCAAACCATATTATGCTCCAGGG...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGCCACACTTGCTCCAGTaGGGGCAGGACCTTGGCTCG +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRPHLLQ*GQDLGS
Trigger: CGAGCCAAGGTCCTGCCCCCACTGGAGCAAGTGTGG...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGTGCTACTGCTGCTGCTaGTGGTGGTGCCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWCYCCC*WWCRGG
Trigger: GCCTCCCCGGCACCACCACCAGCAGCAGCAGTAGCA...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGCTACTGCTGGTGGTTaGGGTTGGGGGAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRATAGG*GWGSGR
Trigger: CCTCCCACTCCCCCAACCCCAACCACCAGCAGTAGC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGCATCAGGTAGGATCTTaGATTCGGCTGGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAHQVGS*IRLAPQ
Trigger: TTGAGGAGCCAGCCGAATTCAAGATCCTACCTGATG...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGGCCCCTCACTAAGTaGGCGCAGCTTCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRGPLTK*AQLQHV
Trigger: GACATGCTGAAGCTGCGCTCACTTAGTGAGGGGCCC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGGAGCATAATATGGTTTaGTGGGGTGCCCAGAACTAC +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLEHNMV*WGAQNY
Trigger: GTAGTTCTGGGCACCCCAGCAAACCATATTATGCTC...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGTCTGACTCGTACAGTTaGCCAAGCTGTTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VTSMYIHEPRASAPGGRASDSYS*PSCSQS
Trigger: GCTTTGGGAACAGCTTGGGCAACTGTACGAGTCAGA...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGTGGATCTCCTCGCTCTaGAGGTCCAGGTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRWISSL*RSRFPS
Trigger: GCTGGGGAACCTGGACCTGCAGAGCGAGGAGATCCA...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGTTCTTCGGGTCTGGTaGGCTGCTAGGAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRVLRVW*AARRGS
Trigger: GGAACCCCTCCTAGCAGCGCACCAGACCCGAAGAAC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCATAATATGGTTTGCTaGGGTGCCCAGAACTACTGC +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLHNMVC*GAQNYC
Trigger: GCAGTAGTTCTGGGCACCCCAGCAAACCATATTATG...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCCTCTTCCTTGCGAATaGATTCGTCCAGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLPLPCE*IRPASS
Trigger: TGAAGATGCTGGACGAATCCATTCGCAAGGAAGAGG...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGCTGCAGCAGGACAGGTaGGAAGGCATCCCGTTTGCT +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRLQQDR*EGIPFA
Trigger: AGCAAACGGGATGCCTTCTCACCTGTCCTGCTGCAG...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGCCTGCACACAGCCATaGAGGGATTCCAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRACTQP*RDSSFP
Trigger: TGGGAAGCTGGAATCCCTGCATGGCTGTGTGCAGGC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGACCAGTGTTGCTaGTGCTGCTACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRGDQCC*CCYCCC
Trigger: GCAGCAGCAGTAGCAGCAGCAGCAACACTGGTCTCC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGTCATCTGAGGGCTGCTaGACCTGGGTGCGAACTTCC +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRSSEGC*TWVRTS
Trigger: GGAAGTTCGCACCCAGGTGCAGCAGCCCTCAGATGA...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGGTTCTTCGGGTCTGGTaGGCTGCTAGGAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWVLRVW*AARRGS
Trigger: GGAACCCCTCCTAGCAGCGCACCAGACCCGAAGAAC...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGAGGTCTCCGGGTCGCTaGACGAAGCGGTACACAGGA +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWRSPGR*TKRYTG
Trigger: TCCTGTGTACCGCTTCGTGCAGCGACCCGGAGACCT...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGTGGCCTGCACCCAGTaGACAGTCCCCGCATTAATC +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRVACTQ*TVPALI
Trigger: GATTAATGCGGGGACTGTGCACTGGGTGCAGGCCAC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGCCCGCTACCCCCAGATaGCTGCCTCAGTCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWPATPR*LPQSFH
Trigger: GTGAAAGGACTGAGGCAGCCATCTGGGGGTAGCGGG...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGTGCTGTTGCTACTGCTaGTGGTTGGGGTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRCCCYC*WLGLGE
Trigger: CTCCCCCAACCCCAACCACCAGCAGTAGCAACAGCA...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGGGGTCTATACTTCTaGCCAGATAGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRGGLYF*PDRVVG
Trigger: CCCCACCACCCTATCTGGCCAGAAGTATAGACCCCC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGCGGCTCTTTTCTTTaGGGACCTTGGCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRGGSFL*GPWPWP
Trigger: AGGCCAAGGCCAAGGTCCCCAAAGAAAAGAGCCGCC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGATGCCCAGGATGGTGTaGCCCACGTGGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWMPRMV*PTWLSM
Trigger: CATGCTGAGCCACGTGGGCCACACCATCCTGGGCAT...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGCTCTCGCGTTGCACCTaGCAGTGCTTCATGGACTGC +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRLSRCT*QCFMDC
Trigger: GCAGTCCATGAAGCACTGCCAGGTGCAACGCGAGAG...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGAAAGTTGGCCGGGGCTaGGAAGGACGGGGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRKVGRG*EGRGSF
Trigger: AAAGGAACCCCGTCCTTCCCAGCCCCGGCCAACTTT...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGATCCCAGTTCTCATCTaGGGGCTGCTGCACCTGGGT +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWIPVLI*GLLHLG
Trigger: ACCCAGGTGCAGCAGCCCTCAGATGAGAACTGGGAT...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGAGCAAGTTCCACACTTaGTCCAGTGGGGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWSKFHT*SSGGRT
Trigger: GGTCCTGCCCCCACTGGAGCAAGTGTGGAACTTGCT...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGTGTTGCTGTTGCTACTaGTGGTGGTTGGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRCCCCY*WWLGLG
Trigger: CCCCAACCCCAACCACCAGCAGTAGCAACAGCAACA...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGCCGGGTGGAAACAGCTaGTCCAGTCCCCCGATAACA +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWPGGNS*SSPPIT
Trigger: TGTTATCGGGGGACTGGAGCAGCTGTTTCCACCCGG...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGTTCTCATCTGAGGGCTaGTGCACCTGGGTGCGAACT +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRFSSEG*CTWVRT
Trigger: AGTTCGCACCCAGGTGCAGCAGCCCTCAGATGAGAA...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGGTGGCCTGCACCCAGTaGACAGTCCCCGCATTAATC +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWVACTQ*TVPALI
Trigger: GATTAATGCGGGGACTGTGCACTGGGTGCAGGCCAC...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGCCACATCGCACTCGTTaGAGTAGTAGGCTGGCTCGT +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRPHRTR*SSRLAR
Trigger: ACGAGCCAGCCTACTACTGCAACGAGTGCGATGTGG...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGATTAAAAACCTCGGCTaGCGTAACGTCTATGTACAT +
Preference number: 4 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSIKNLG*RNVYVH
Trigger: ATGTACATAGACGTTACGGCAGCCGAGGTTTTTAAT...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTGCAGCGCGGGCCCCTaGAGGGTCCACTGCCCGATG +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTCSAGP*RVHCPM
Trigger: CATCGGGCAGTGGACCCTCCAGGGGCCCGCGCTGCA...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGTCCTCCAGCGGAGTaGGGGGAAAATCAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRGPPAE*GENQRV
Trigger: GACTCTTTGATTTTCCCCCCACTCCGCTGGAGGACC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGTTTCTTTGGGGACCTTaGCCTTGGCCTTTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRFLWGP*PWPLPC
Trigger: GCAGGGCAAAGGCCAAGGCCAAGGTCCCCAAAGAAA...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGGGCGGCTCTTTTCTTTaGGGACCTTGGCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWGGSFL*GPWPWP
Trigger: AGGCCAAGGCCAAGGTCCCCAAAGAAAAGAGCCGCC...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGTTGTTATTCTCCTGGTaGCCTGGCGTTCGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWLLFSW*PGVRLP
Trigger: CGGCAGCCGAACGCCAGGCCACCAGGAGAATAACAA...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCCCGCTTACAGCTGCCTaGCACTGCCGCCACCCCGCC +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTPLTAA*HCRHPA
Trigger: GGCGGGGTGGCGGCAGTGTCAGGCAGCTGTAAGCGG...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGCAGTCTGTTCAGAGTTaGAGCCTCTCCTTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRQSVQS*SLSFAC
Trigger: GCAAGCGAAGGAGAGGCTGCAACTCTGAACAGACTG...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCCCCGAAGCCCGTCCCTaGAGCCTGCCCCAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTPEARP*SLPQCP
Trigger: AGGGCACTGGGGCAGGCTGCAGGGACGGGCTTCGGG...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000254846.9
CDS-3UTR GCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCCATACACGAGCCGCGTaGATCTGCGCCGGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTHTRAA*ICAGRA
Trigger: CGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATG...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGCCACAGTGGGTGGGGTaGGCAGTGCTACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTPQWVG*AVLRGW
Trigger: CCAGCCCCGTAGCACTGCCCACCCCACCCACTGTGG...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCGGTCGGCTGGGTCAGTaGCACTCCGGCCCACCCGCT +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTGRLGQ*HSGPPA
Trigger: AGCGGGTGGGCCGGAGTGCCACTGACCCAGCCGACC...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGAGATCATCCAGGATTaGCCACCAGGAACCCGTCAA +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVREIIQD*PPGTRQ
Trigger: TTGACGGGTTCCTGGTGGCCAATCCTGGATGATCTC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGGAGGGAACCCGTATGTaGCCCCCGCCGCCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMEGTRM*PPPPPE
Trigger: CTCCGGCGGCGGCGGGGGTCACATACGGGTTCCCTC...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGGGGTGGGGTGGGCAGTaGTACGGGGCTGGCATGTTG +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTGWGGQ*YGAGML
Trigger: CAACATGCCAGCCCCGTAGCACTGCCCACCCCACCC...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCTTGGGCACGGCCCCCTaGCCCAGCTCTCTGGGACGA +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTLGTAP*PSSLGR
Trigger: TCGTCCCAGAGAGCTGGGGCAGGGGGCCGTGCCCAA...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGGCCTCCAGGCAGCCATaGGCTACGAGGAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTASRQP*ATRRGM
Trigger: CATCCCCCTCCTCGTAGCGCATGGCTGCCTGGAGGC...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTGCTGCTGGTGGTGGTaGCGGGGAGGCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMCCWWW*RGGQGA
Trigger: GGCCCCCTGGCCTCCCCGGCACCACCACCAGCAGCA...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGGTCGCCGCTTACAGCTaGCTGACACTGCCGCCACCC +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTVAAYS*LTLPPP
Trigger: GGGTGGCGGCAGTGTCAGGCAGCTGTAAGCGGCGAC...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGCTCTCCTTCTCCTCCTaGAGAGACTCCTGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWLSFSS*RDSWKD
Trigger: ATCCTTCCAGGAGTCTCTGCAGGAGGAGAAGGAGAG...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCGTGGGGGCAGGACCTTaGCTCGGTGCTGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTVGAGP*LGAGRS
Trigger: GCTCCTGCCAGCACCGAGCCAAGGTCCTGCCCCCAC...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGCATGGGGCCCGGGACTaGCTCTTCGCCCGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMHGARD*LFARPA
Trigger: CGCAGGGCGGGCGAAGAGCCAGTCCCGGGCCCCATG...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTGGGTGGCTTGGCCTTaGAGGCCCCGCCAAGATCGG +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTWVAWP*RPRQDR
Trigger: CCGATCTTGGCGGGGCCTCCAAGGCCAAGCCACCCA...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCGGCTGGAGCTGTGGGTaGCTTGGCCTTGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTGWSCG*LGLGGP
Trigger: GGGGCCTCCAAGGCCAAGCCACCCACAGCTCCAGCC...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGCCAGGCATGTGCTGGTaGCCCCGCGGCGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMPGMCW*PRGALR
Trigger: GCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGG...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCTCGCGACGTGCTGGCTaGGGCCAGCGTGAAGGCGTC +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTSRRAG*GQREGV
Trigger: GACGCCTTCACGCTGGCCCCAGCCAGCACGTCGCGA...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448097.7
CDS-3UTR GCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCCCCTGGAGGGTCCACTaGCCGATGCATCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTPWRVH*PMHPAR
Trigger: CCTGGCTGGATGCATCGGGCAGTGGACCCTCCAGGG...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGAGCATAATATGGTTTaGTGGGGTGCCCAGAACTAC +
Preference number: 4 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVREHNMV*WGAQNY
Trigger: GTAGTTCTGGGCACCCCAGCAAACCATATTATGCTC...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGCCTGCTTCGTGTTGTTaGTGTTCCTCTTCCTTGCGA +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWPASCC*CSSSLR
Trigger: TCGCAAGGAAGAGGAACAGCAACAACACGAAGCAGG...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATATCCAGCCCAGGCATGTaGTGGTGGCCCCGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYISSPGM*WWPRGA
Trigger: GGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGA...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGGGGGCTGCCCAATGCTaGCTGAGCATCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTGAAQC*LSICLQ
Trigger: CTGGAGGCAGATGCTCAGCCAGCATTGGGCAGCCCC...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAATGGCTCTCTGCTCCTaGGGGGCGGGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIMALCS*GAGAWA
Trigger: GGCCCAGGCCCCCGCCCCCCAGGAGCAGAGAGCCAT...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGCCGGGCGGCACAGGCTaGGGGGCTTTACTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMPGGTG*GALLRG
Trigger: CCCCCTGAGTAAAGCCCCCCAGCCTGTGCCGCCCGG...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGGCTGGCTCCTCAAACTaGTCCTCCAGCGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTAGSSN*SSSGVG
Trigger: CCCCACTCCGCTGGAGGACCAGTTTGAGGAGCCAGC...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGGTGAGGCCCTGGCCCTaGGTTGTTTCACACTTAAAA +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWVRPWP*VVSHLK
Trigger: TTTTAAGTGTGAAACAACCCAGGGCCAGGGCCTCAC...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACCCAGGCGGCCATGGTaGGAGACCTCCAGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIPRRPW*ETSSAG
Trigger: TCCCGCGCTGGAGGTCTCTCACCATGGCCGCCTGGG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGAGATGGAGTTTGGTGTaGCCTGTCTCATTGGAACCA +
Preference number: 4 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWRWSLV*PVSLEP
Trigger: TGGTTCCAATGAGACAGGGCACACCAAACTCCATCT...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGGCTGCAGTCGGCCAATaGGGGGCCCCAGCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMAAVGQ*GAPAQR
Trigger: TCGCTGAGCTGGGGCCCCGCATTGGCCGACTGCAGC...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGCCTTGGCCTTTGCCCTaGCCTCACGGGGCCGACGAC +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMPWPLP*PHGADD
Trigger: GTCGTCGGCCCCGTGAGGGCAGGGCAAAGGCCAAGG...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACATACACGAGCCGCGTaGATCTGCGCCGGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIHTRAA*ICAGRA
Trigger: CGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGCCCATGGAGGGGTCTTaGAGTGGGCGCCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMPMEGS*SGRPWS
Trigger: GCTCCAGGGGCGCCCACTCCAAGACCCCTCCATGGG...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACCGGGCGGCACAGGCTaGGGGGCTTTACTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIPGGTG*GALLRG
Trigger: CCCCCTGAGTAAAGCCCCCCAGCCTGTGCCGCCCGG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCGGGTGGTGGTGGCTGTaGCTGAGAGGGTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTGWWWL*LRGWRE
Trigger: TTCCCTCCACCCTCTCAGCCACAGCCACCACCACCC...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGGACACCCGGTGGCCCTaGGGCTTCCTCCCGAGCCTT +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMDTRWP*GFLPSL
Trigger: AAGGCTCGGGAGGAAGCCCCAGGGCCACCGGGTGTC...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAACCCTCAGGTGGGGCTaGGGTCGGGTCGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYITLRWG*GRVGSG
Trigger: CCCACTCCCGACCCGACCCCAGCCCCACCTGAGGGT...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCGCCCCAGTGAGGCCCTaGCCCTGGGTTGTTTCACAC +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTAPVRP*PWVVSH
Trigger: GTGTGAAACAACCCAGGGCCAGGGCCTCACTGGGGC...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGGGTACTGATAGGCGGTaGGGGGCCCCACGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMGTDRR*GAPRSR
Trigger: CCTGGAACGTGGGGCCCCTCACCGCCTATCAGTACC...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGGAGGGGTTCCAGTGGTaGTGTCTGGCTCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTEGFQW*CLAPLT
Trigger: AGTCAGAGGAGCCAGACAGCACCACTGGAACCCCTC...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCGCTGCACCGTGTTCATaGCCAGGATGGTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTAAPCS*PGWCGP
Trigger: TGGGCCACACCATCCTGGGCATGAACACGGTGCAGC...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGACCAGGCTCTCGCGTTaGACCTGGCAGTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTTRLSR*TWQCFM
Trigger: CATGAAGCACTGCCAGGTGCAACGCGAGAGCCTGGT...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCGAGCCAGCTCCTCAGTaGGGTACTGCTCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTEPAPQ*GTAPAP
Trigger: TGGTGCTGGAGCAGTACCGCACTGAGGAGCTGGCTC...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGAAGCCCTGGCTGGGCTaGCTCCCGGAGCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMKPWLG*LPEQCL
Trigger: CAGGCATTGCTCCGGGAGCCAGCCCAGCCAGGGCTT...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGAGCTGGGTATGGATATaGGTGAGGCAGCGAGTGCCG +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTSWVWI*VRQRVP
Trigger: CGGCACTCGCTGCCTCACCCATATCCATACCCAGCT...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTTCTTCTCCTCTTCCTaGGTGGCCGTGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTFFSSS*VAVVVV
Trigger: CACCACCACCACGGCCACCCAGGAAGAGGAGAAGAA...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGGTTGGGTGGGGGTCATaGGGCCCGGGACTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMVGWGS*GPGLAL
Trigger: AAGAGCCAGTCCCGGGCCCCATGACCCCCACCCAAC...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCAGTCCCACTGTCCGCTaGCTCTGCTGTGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTSPTVR*LCCVHW
Trigger: CCAGTGGACACAGCAGAGCCAGCGGACAGTGGGACT...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGGAGGGGCTGGAGCTGTaGGTGGCTTGGCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMEGLEL*VAWPWR
Trigger: CCTCCAAGGCCAAGCCACCCACAGCTCCAGCCCCTC...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGACGTCAGCAGCACAGTaGCTGATGGTGAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTTSAAQ*LMVRSA
Trigger: GGCAGACCTCACCATCAGCCACTGTGCTGCTGACGT...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGATGGTTCTTCGGGTCTaGTGCGCTGCTAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTMVLRV*CAARRG
Trigger: ACCCCTCCTAGCAGCGCACCAGACCCGAAGAACCAT...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGCGTCCAGCATCTTCATaGTGTTGGCCAGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTRPASS*CWPAHQ
Trigger: CTGATGGGCTGGCCAACATCATGAAGATGCTGGACG...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGGGTGGTGGCTGTGGCTaGGAGGGTGGAGGGAACTTG +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMGGGCG*EGGGNL
Trigger: CAAGTTCCCTCCACCCTCTCAGCCACAGCCACCACC...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAAAAGGCCAAAGTCGGTaGGGGGAGGCGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIKGQSR*GEALVG
Trigger: GCCCACCAGCGCCTCCCCTCACCGACTTTGGCCTTT...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAGCCTCCAGGCAGCCATaGGCTACGAGGAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIASRQP*ATRRGM
Trigger: CATCCCCCTCCTCGTAGCGCATGGCTGCCTGGAGGC...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGGGCCTGGCGTTCGGCTaGCGGGCACCTTCATGTACA +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMGLAFG*RAPSCT
Trigger: TGTACATGAAGGTGCCCGGCAGCCGAACGCCAGGCC...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCCGTTGCACCTGGCAGTaGTTCATGGACTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTRCTWQ*FMDCSR
Trigger: CCTGCTGCAGTCCATGAAGCACTGCCAGGTGCAACG...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGAGCTCTCTGGGACGATaGTCCGGCTCCAGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMSSLGR*SGSSRS
Trigger: AGAGCGGCTGGAGCCGGACCATCGTCCCAGAGAGCT...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACCTGCCCCAGCTCTCTaGGACGATGGTCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIPAPAL*DDGPAP
Trigger: TGGAGCCGGACCATCGTCCCAGAGAGCTGGGGCAGG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACTGTTCCCAAAGCCCTaGCTGGGCTGGCTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYILFPKP*LGWLPE
Trigger: CTCCGGGAGCCAGCCCAGCCAGGGCTTTGGGAACAG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCTGCTGTTGCTACTGCTaGTGGTTGGGGTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTCCCYC*WLGLGE
Trigger: CTCCCCCAACCCCAACCACCAGCAGTAGCAACAGCA...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGCCTGAGGTATTTTGGTaGCAGGAGGAAGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTPEVFW*QEEGGA
Trigger: AGCCCCTCCTTCCTCCTGCCACCAAAATACCTCAGG...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACACCTCGGGGGTCTTTaGGAAGGAGACCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIHLGGL*EGDPGP
Trigger: CGGCCCAGGGTCTCCTTCCCAAAGACCCCCGAGGTG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAAGGGCCCAGGCCGGGTaGAAACAGCTGCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIRAQAG*KQLLQS
Trigger: GGACTGGAGCAGCTGTTTCCACCCGGCCTGGGCCCT...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAGAGCTGTGGGTGGCTTaGCCTTGGAGGCCCCGCCAA +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIELWVA*PWRPRQ
Trigger: TTGGCGGGGCCTCCAAGGCCAAGCCACCCACAGCTC...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCGTGCGTACTTGGCAATaGTGGTGTGGGAACGGGAGC +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTVRTWQ*WCGNGS
Trigger: GCTCCCGTTCCCACACCACCATTGCCAAGTACGCAC...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCATGGTTCTTCGGGTCTaGTGCGCTGCTAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTMVLRV*CAARRG
Trigger: ACCCCTCCTAGCAGCGCACCAGACCCGAAGAACCAT...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCTGTTCATGCCCAGGATaGTGTGGCCCACGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTCSCPG*CGPRGS
Trigger: TGAGCCACGTGGGCCACACCATCCTGGGCATGAACA...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCGATGGCTTGGGGGTGTaGGAGGTCGGGTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTDGLGV*EVGFSQ
Trigger: TTGGGAAAACCCGACCTCCCACACCCCCAAGCCATC...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAGGGTATGGATATGGGTaGGGCAGCGAGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIGYGYG*GSECRC
Trigger: GCAGCGGCACTCGCTGCCTCACCCATATCCATACCC...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACGCCGATGCTCCTTCTaGTGCTCCTTCTGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIRRCSF*CSFCRR
Trigger: GCGGCGACAGAAGGAGCATCAGAAGGAGCATCGGCG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCTTAAGTGAGGGGAGCTaGCAATGGGGTGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTLSEGS*QWGGRA
Trigger: AGCCCTTCCACCCCATTGGCAGCTCCCCTCACTTAA...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGCCCTGGAGCATAATATaGTTTGCTGGGGTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTPWSII*FAGVPR
Trigger: TCTGGGCACCCCAGCAAACCATATTATGCTCCAGGG...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATATCCCAAAGCCCTGGCTaGGCTGGCTCCCGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYISQSPG*AGSRSN
Trigger: ATTGCTCCGGGAGCCAGCCCAGCCAGGGCTTTGGGA...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCCCTGAGGTATTTTGGTaGCAGGAGGAAGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTPEVFW*QEEGGA
Trigger: AGCCCCTCCTTCCTCCTGCCACCAAAATACCTCAGG...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACTCTGCTGTGTCCACTaGGTCGGCTGGGTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYILCCVH*VGWVSG
Trigger: GCCACTGACCCAGCCGACCCAGTGGACACAGCAGAG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCCTTCCACCAGGGTCTTaGTGGAGAAGAGGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTLPPGS*WRRGPS
Trigger: ACTTGGGCCTCTTCTCCACCAAGACCCTGGTGGAAG...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAGAGGGCTGCTGCACCTaGGTGCGAACTTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIEGCCT*VRTSTV
Trigger: CACCGTGGAAGTTCGCACCCAGGTGCAGCAGCCCTC...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTGGATGTTACCCGCATaGAGGCGGGCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMWMLPA*RRAASA
Trigger: TGCTGAAGCTGCCCGCCTTCATGCGGGTAACATCCA...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGACGTTCCATGACACGTaGATCATGGGCACGATGGAT +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTTFHDT*IMGTMD
Trigger: ATCCATCGTGCCCATGATTCACGTGTCATGGAACGT...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGGGCTGCTGCTGTGGCTaGCACTGTTGCTGTTGCTAC +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMGCCCG*HCCCCY
Trigger: GTAGCAACAGCAACAGTGGCAGCCACAGCAGCAGCC...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGGCTGTTCCTCTTCCTTaGGAATGGATTCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTAVPLP*EWIRPA
Trigger: TGCTGGACGAATCCATTCGCAAGGAAGAGGAACAGC...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATATGGATCTCCTCGCTCTaGAGGTCCAGGTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIWISSL*RSRFPS
Trigger: GCTGGGGAACCTGGACCTGCAGAGCGAGGAGATCCA...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGCAGTGCTTCATGGACTaGAGCAGGCAGAACTTGATC +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTQCFMD*SRQNLI
Trigger: GATCAAGTTCTGCCTGCTGCAGTCCATGAAGCACTG...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAGAGCCAGCTCCTCAGTaGGGTACTGCTCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIEPAPQ*GTAPAP
Trigger: TGGTGCTGGAGCAGTACCGCACTGAGGAGCTGGCTC...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACACAGGCTGCACCACTaGGGGTTCAGCAGCTCGCTT +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIHRLHH*GFSSSL
Trigger: AAGCGAGCTGCTGAACCCCCAGTGGTGCAGCCTGTG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGCTGCTGGTGAAACGCTaGAGTCCATCCGCGACCTCT +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMLLVKR*SPSATS
Trigger: AGAGGTCGCGGATGGACTCCAGCGTTTCACCAGCAG...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGGGGGGTCTATACTTCTaGCCAGATAGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMGGLYF*PDRVVG
Trigger: CCCCACCACCCTATCTGGCCAGAAGTATAGACCCCC...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGGATCTTGAATTCGGCTaGCTCCTCAAACTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GGVKPIERISLKTSAAVTDLEFG*LLKLVL
Trigger: GAGGACCAGTTTGAGGAGCCAGCCGAATTCAAGATC...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTTCTTCTCCTCTTCCTaGGTGGCCGTGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMFFSSS*VAVVVV
Trigger: CACCACCACCACGGCCACCCAGGAAGAGGAGAAGAA...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGGACTTCTCACGACCCTaGATCTCCTCGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMDFSRP*ISSLCR
Trigger: CCTGCAGAGCGAGGAGATCCAGGGTCGTGAGAAGTC...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAATGCCCAGGATGGTGTaGCCCACGTGGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIMPRMV*PTWLSM
Trigger: CATGCTGAGCCACGTGGGCCACACCATCCTGGGCAT...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTGTTCATGCCCAGGATaGTGTGGCCCACGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMCSCPG*CGPRGS
Trigger: TGAGCCACGTGGGCCACACCATCCTGGGCATGAACA...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACTGCAGCAGGACAGGTaGGAAGGCATCCCGTTTGCT +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYILQQDR*EGIPFA
Trigger: AGCAAACGGGATGCCTTCTCACCTGTCCTGCTGCAG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCTATGGTTTGCTGGGGTaGCCAGAACTACTGCCATGT +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTYGLLG*PELLPC
Trigger: ACATGGCAGTAGTTCTGGGCACCCCAGCAAACCATA...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAGGAGACCAGTGTTGCTaGTGCTGCTACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIGDQCC*CCYCCC
Trigger: GCAGCAGCAGTAGCAGCAGCAGCAACACTGGTCTCC...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTGTGGCTGCCACTGTTaGTGTTGCTACTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMCGCHC*CCYCWW
Trigger: CCACCAGCAGTAGCAACAGCAACAGTGGCAGCCACA...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACCGGGTGGAAACAGCTaGTCCAGTCCCCCGATAACA +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIPGGNS*SSPPIT
Trigger: TGTTATCGGGGGACTGGAGCAGCTGTTTCCACCCGG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGCCACATCGCACTCGTTaGAGTAGTAGGCTGGCTCGT +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMPHRTR*SSRLAR
Trigger: ACGAGCCAGCCTACTACTGCAACGAGTGCGATGTGG...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTGTGCCCTGTCTCATTaGAACCACCACCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMCALSH*NHHPSS
Trigger: ACTGCTGGGGTGGTGGTTCCAATGAGACAGGGCACA...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCCAAGCTCCAGAGATCTaGCCAATCACAGGACTTCCT +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTQAPEI*PITGLP
Trigger: AGGAAGTCCTGTGATTGGCCAGATCTCTGGAGCTTG...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAAGCTGGGTATGGATATaGGTGAGGCAGCGAGTGCCG +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYISWVWI*VRQRVP
Trigger: CGGCACTCGCTGCCTCACCCATATCCATACCCAGCT...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAGTGCGCGGTGTACGCTaGAGCTGGGTATGGATATGG +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIVRGVR*SWVWIW
Trigger: CCATATCCATACCCAGCTCCAGCGTACACCGCGCAC...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGGGTCCTCCAGCGGAGTaGGGGGAAAATCAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMGPPAE*GENQRV
Trigger: GACTCTTTGATTTTCCCCCCACTCCGCTGGAGGACC...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAGACTTCTCACGACCCTaGATCTCCTCGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIDFSRP*ISSLCR
Trigger: CCTGCAGAGCGAGGAGATCCAGGGTCGTGAGAAGTC...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGACTTCCCTTTCACCTTaGCATTCCTGCTGGCGCGCA +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMTSLSP*HSCWRA
Trigger: TGCGCGCCAGCAGGAATGCCAAGGTGAAAGGGAAGT...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATATCCATCCGCGACCTCTaGACTCTGCTCTCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYISIRDL*TLLSLR
Trigger: CCTTAGAGAGAGCAGAGTTCAGAGGTCGCGGATGGA...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGCCTGAGGTAGAGAACTaGGATGACGAGGAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMPEVEN*DDEEAE
Trigger: CTCTGCTTCCTCGTCATCTCAGTTCTCTACCTCAGG...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTGGAGTGGGCGCCCCTaGAGCATAATATGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMWSGRP*SIIWFA
Trigger: AGCAAACCATATTATGCTCCAGGGGCGCCCACTCCA...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACCACTCGCAGTCGCCTaGGCCAATGTTGATGTTGAC +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIPLAVA*ANVDVD
Trigger: GTCAACATCAACATTGGCCCAGGCGACTGCGAGTGG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR TCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAGATCACAGAAAGCGCTaGTGGTCTCCCAGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIDHRKR*WSPSSA
Trigger: AGCACTACTGGGAGACCATCAGCGCTTTCTGTGATC...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTCTGACTCGTACAGTTaGCCAAGCTGTTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VKPIERISLKTSAAVTSMSDSYS*PSCSQS
Trigger: GCTTTGGGAACAGCTTGGGCAACTGTACGAGTCAGA...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAGGGTCTGTACAGAACTaGAGCAGGACAGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIGSVQN*SRTGEK
Trigger: CTTCTCACCTGTCCTGCTGCAGTTCTGTACAGACCC...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATATTGGCAATGGTGGTGTaGGAACGGGAGCTCTCACAA +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYILAMVV*ERELSQ
Trigger: TTGTGAGAGCTCCCGTTCCCACACCACCATTGCCAA...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAGGTACTGTGCGTACTTaGCAATGGTGGTGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIGTVRT*QWWCGN
Trigger: GTTCCCACACCACCATTGCCAAGTACGCACAGTACC...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACAAGCTCCAGAGATCTaGCCAATCACAGGACTTCCT +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIQAPEI*PITGLP
Trigger: AGGAAGTCCTGTGATTGGCCAGATCTCTGGAGCTTG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CCA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAGATCTTGAATTCGGCTaGCTCCTCAAACTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PIERISLKTSAAVTSMYIDLEFG*LLKLVL
Trigger: GAGGACCAGTTTGAGGAGCCAGCCGAATTCAAGATC...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR GCA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCCACAGGAATATTGGATaGATAGAGATCATCCAGGAT +
Preference number: 4 (lower is better)
Translates to: QNTISVPTSSPTVQELLTHRNIG*IEIIQD
Trigger: ATCCTGGATGATCTCTATGCATCCAATATTCCTGTG...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGCCACCTCGGGGGTCTTaGGGAAGGAGACCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGPPRGS*GRRPWA
Trigger: GGCCCAGGGTCTCCTTCCCAAAGACCCCCGAGGTGG...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGGGGTGCTGAACCCTaGCGCTCTGGGCCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAGGAEP*RSGPQA
Trigger: TGCCTGGGGCCCAGAGCGCAAGGGTTCAGCACCCCC...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 90 bp GTGCCCTCCTCCGCTGCCCGCGCGCCCGCCGGGCCCTCACCAGCGTaGAGGCGTCGTAGGCCTGAGCCAGCTCCTCAGTGCGGTACTGCT +
Preference number: 5 (lower is better)
Translates to: VPSSAARAPAGPSPA*RRRRPEPAPQCGTA
Trigger: AGCAGTACCGCACTGAGGAGCTGGCTCAGGCCTACGACGCCTTCACGCTGGTGAGGGCCCGGCGGGCGCGCGGGCAGCGGAGGAGGGCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254846.9
CDS-3UTR CAA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCACCACCTCGGGGGTCTTaGGGAAGGAGACCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAPPRGS*GRRPWA
Trigger: GGCCCAGGGTCTCCTTCCCAAAGACCCCCGAGGTGG...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGTGGGTGGCTTGGCCTaGGAGGCCCCGCCAAGATCG +
Preference number: 5 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAVGGLA*EAPPRS
Trigger: CGATCTTGGCGGGGCCTCCAAGGCCAAGCCACCCAC...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCGGAGCTGTGGGTGGCTaGGCCTTGGAGGCCCCGCCA +
Preference number: 5 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPAGAVGG*ALEAPP
Trigger: TGGCGGGGCCTCCAAGGCCAAGCCACCCACAGCTCC...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCGTGGGTGGCTTGGCCTaGGAGGCCCCGCCAAGATCG +
Preference number: 5 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPAVGGLA*EAPPRS
Trigger: CGATCTTGGCGGGGCCTCCAAGGCCAAGCCACCCAC...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGTTCCAGGCAATGTTGTaGCACCAGCCGGTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGFQAML*HQPVAC
Trigger: GCAGGCCACCGGCTGGTGCAACAACATTGCCTGGAA...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 90 bp GGGAGTGGCAGCGGGAGCCCCCAAGAACGGTTTCCGACTGCTGTGTaGCGAGGGCCCCAGGCGGCCATGGTGAGAGACCTCCAGCGCGGG +
Preference number: 5 (lower is better)
Translates to: GSGSGSPQERFPTAV*RGPQAAMVRDLQRG
Trigger: CCCGCGCTGGAGGTCTCTCACCATGGCCGCCTGGGGCCCTCGGCACACAGCAGTCGGAAACCGTTCTTGGGGGCTCCCGCTGCCACTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCACGGAGGCCAAGGATTaGAGCAGGCTGGCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPATEAKD*SRLAGL
Trigger: CAGCCCGGCCAGCCTGCTCAAATCCTTGGCCTCCGT...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 90 bp CGCCGGGAATGCCTGGGTTCGGCTCCACGCCCCGGAGACCAGTGTTaGTGCTGCTGCTACTGCTGCTGCTGGTGGTGGTGCCGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: RRECLGSAPRPGDQC*CCCYCCCWWWCRGG
Trigger: GCCTCCCCGGCACCACCACCAGCAGCAGCAGTAGCAGCAGCAGCAACACTGGTCTCCGGGGCGTGGAGCCGAACCCAGGCATTCCCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CCA 90 bp CACTGTCCGCTGGCTCTGCTGTGTCCACTGGGTCGGCTGGGTCAGTaGCACTCCGGCCCACCCGCTCCACAAGGGTCTCGCAAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: HCPLALLCPLGRLGQ*HSGPPAPQGSRKPG
Trigger: GCCGGGCTTGCGAGACCCTTGTGGAGCGGGTGGGCCGGAGTGCCACTGACCCAGCCGACCCAGTGGACACAGCAGAGCCAGCGGACAGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 90 bp GCAGCGAGTGCCGCTGCTCCTGGCGCTCTGGGGGTGCTGAACCCTTaGGCTCTGGGCCCCAGGCATCTCCATGCAGGGTACTCCACAGCC +
Preference number: 5 (lower is better)
Translates to: AASAAAPGALGVLNP*ALGPRHLHAGYSTA
Trigger: GGCTGTGGAGTACCCTGCATGGAGATGCCTGGGGCCCAGAGCGCAAGGGTTCAGCACCCCCAGAGCGCCAGGAGCAGCGGCACTCGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 90 bp CCCAGGAGCCCTGGAGATTGGGCACGGCCCCCTGCCCCAGCTCTCTaGGACGATGGTCCGGCTCCAGCCGCTCTGATAAGAGTGCCCGCT +
Preference number: 5 (lower is better)
Translates to: PRSPGDWARPPAPAL*DDGPAPAALIRVPA
Trigger: AGCGGGCACTCTTATCAGAGCGGCTGGAGCCGGACCATCGTCCCAGAGAGCTGGGGCAGGGGGCCGTGCCCAATCTCCAGGGCTCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS-3UTR CAA 90 bp AGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAGGCGGGACAGCCAGATGGAGTTaGGTGTGCCCTGTCTCATTG +
Preference number: 5 (lower is better)
Translates to: SPGMCWWPRGALRGQAGGTARWS*VCPVSL
Trigger: CAATGAGACAGGGCACACCAAACTCCATCTGGCTGT...CCCGCCTGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCGCACGCAGGCGGTGGTaGCTGCTGGTGAAACGCTGG +
Preference number: 5 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGARRRW*LLVKRW
Trigger: CCAGCGTTTCACCAGCAGCAACCACCGCCTGCGTGC...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGGCACGCAGGCGGTGGTaGCTGCTGGTGAAACGCTGG +
Preference number: 5 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSARRRW*LLVKRW
Trigger: CCAGCGTTTCACCAGCAGCAACCACCGCCTGCGTGC...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCACTGCCACTGTTGCTGTaGCTACTGCTGGTGGTTGGG +
Preference number: 5 (lower is better)
Translates to: RSSPGMCWWPRGALRGQALPLLL*LLLVVG
Trigger: CCCAACCACCAGCAGTAGCAACAGCAACAGTGGCAG...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCGGGAGGGGAGCGGGTTaGAGCACCATGAGAACCCGG +
Preference number: 5 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGGRGAG*STMRTR
Trigger: CCGGGTTCTCATGGTGCTCAAACCCGCTCCCCTCCC...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 90 bp CTCAGTCCCACTGTCCGCTGGCTCTGCTGTGTCCACTGGGTCGGCTaGGTCAGTGGCACTCCGGCCCACCCGCTCCACAAGGGTCTCGCA +
Preference number: 5 (lower is better)
Translates to: LSPTVRWLCCVHWVG*VSGTPAHPLHKGLA
Trigger: TGCGAGACCCTTGTGGAGCGGGTGGGCCGGAGTGCCACTGACCCAGCCGACCCAGTGGACACAGCAGAGCCAGCGGACAGTGGGACTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 90 bp CAGCAGTCGCTCAGTCCCACTGTCCGCTGGCTCTGCTGTGTCCACTaGGTCGGCTGGGTCAGTGGCACTCCGGCCCACCCGCTCCACAAG +
Preference number: 5 (lower is better)
Translates to: QQSLSPTVRWLCCVH*VGWVSGTPAHPLHK
Trigger: CTTGTGGAGCGGGTGGGCCGGAGTGCCACTGACCCAGCCGACCCAGTGGACACAGCAGAGCCAGCGGACAGTGGGACTGAGCGACTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGCCCCGGAGACCAGTGTaGCTGCTGCTGCTACTGCTG +
Preference number: 5 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSPRRPV*LLLLLL
Trigger: CAGCAGTAGCAGCAGCAGCAACACTGGTCTCCGGGG...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGCGGCGGCTCTTTTCTTaGGGGACCTTGGCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRRRLFS*GTLALA
Trigger: GGCCAAGGCCAAGGTCCCCAAAGAAAAGAGCCGCCG...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 90 bp AGCCCTGGCTGGGCTGGCTCCCGGAGCAATGCCTGCACACAGCCATaGAGGGATTCCAGCTTCCCATGGAGGGGTCTTGGAGTGGGCGCC +
Preference number: 5 (lower is better)
Translates to: SPGWAGSRSNACTQP*RDSSFPWRGLGVGA
Trigger: GGCGCCCACTCCAAGACCCCTCCATGGGAAGCTGGAATCCCTGCATGGCTGTGTGCAGGCATTGCTCCGGGAGCCAGCCCAGCCAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS-3UTR CAA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCCCGATAACAGTACTTTaGTCCCTCCAGCACGGAGGC +
Preference number: 5 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPAPITVL*SLQHGG
Trigger: GCCTCCGTGCTGGAGGGACAAAAGTACTGTTATCGG...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGACGTGGCTCAGCATGTaGCCCGTGGATGTTACCCGC +
Preference number: 5 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSTWLSM*PVDVTR
Trigger: GCGGGTAACATCCACGGGCAACATGCTGAGCCACGT...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCAGAGATCATCCAGGATaGGCCACCAGGAACCCGTCA +
Preference number: 5 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPARDHPG*ATRNPS
Trigger: TGACGGGTTCCTGGTGGCCAATCCTGGATGATCTCT...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGGGGTCGCTGATTTaGACCGTGCGAGCCACGTTC +
Preference number: 5 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRSGSLI*TVRATF
Trigger: GAACGTGGCTCGCACGGTCAAAATCAGCGACCCCGA...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGCTGCCACTGTTGCTGTaGCTACTGCTGGTGGTTGGG +
Preference number: 5 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSLPLLL*LLLVVG
Trigger: CCCAACCACCAGCAGTAGCAACAGCAACAGTGGCAG...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGAACTTCCCTTTCACCTaGGCATTCCTGCTGGCGCGC +
Preference number: 5 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSNFPFT*AFLLAR
Trigger: GCGCGCCAGCAGGAATGCCAAGGTGAAAGGGAAGTT...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCACCAGGCTCTCGCGTaGCACCTGGCAGTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLHQALA*HLAVLH
Trigger: ATGAAGCACTGCCAGGTGCAACGCGAGAGCCTGGTG...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 90 bp GGGCCGGGAAGGGGCGTAAGGCACGCAGGCGGTGGTTGCTGCTGGTaGAACGCTGGAGTCCATCCGCGACCTCTGAACTCTGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: GPGRGVRHAGGGCCW*NAGVHPRPLNSALS
Trigger: AGAGAGAGCAGAGTTCAGAGGTCGCGGATGGACTCCAGCGTTTCACCAGCAGCAACCACCGCCTGCGTGCCTTACGCCCCTTCCCGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS TCA 90 bp CCCACACTGTCCTTACAGGCCCGCCTGTGCCGCCGATGCTCCTTCTaGTGCTCCTTCTGTCGCCGCTTACAGCTGCCTGACACTGCCGCC +
Preference number: 5 (lower is better)
Translates to: PTLSLQARLCRRCSF*CSFCRRLQLPDTAA
Trigger: GGCGGCAGTGTCAGGCAGCTGTAAGCGGCGACAGAAGGAGCATCAGAAGGAGCATCGGCGGCACAGGCGGGCCTGTAAGGACAGTGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 90 bp TGTGGCCCACGTGGCTCAGCATGTTGCCCGTGGATGTTACCCGCATaGAGGCGGGCAGCTTCAGCAGCTCCTGCAGCTGGGGCTTCCACC +
Preference number: 5 (lower is better)
Translates to: CGPRGSACCPWMLPA*RRAASAAPAAGAST
Trigger: GGTGGAAGCCCCAGCTGCAGGAGCTGCTGAAGCTGCCCGCCTTCATGCGGGTAACATCCACGGGCAACATGCTGAGCCACGTGGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 90 bp CCCAAGCTGTTCCCAAAGCCCTGGCTGGGCTGGCTCCCGGAGCAATaGCTGCACACAGCCATGCAGGGATTCCAGCTTCCCATGGAGGGG +
Preference number: 5 (lower is better)
Translates to: PKLFPKPWLGWLPEQ*LHTAMQGFQLPMEG
Trigger: CCCCTCCATGGGAAGCTGGAATCCCTGCATGGCTGTGTGCAGGCATTGCTCCGGGAGCCAGCCCAGCCAGGGCTTTGGGAACAGCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS GCA 90 bp CCAAGATCGGGCCGGGACTTCTCACGACCCTGGATCTCCTCGCTCTaGAGGTCCAGGTTCCCCAGCACCCGGCGGCTCTTTTCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: PRSGRDFSRPWISSL*RSRFPSTRRLFSLG
Trigger: CCCCAAAGAAAAGAGCCGCCGGGTGCTGGGGAACCTGGACCTGCAGAGCGAGGAGATCCAGGGTCGTGAGAAGTCCCGGCCCGATCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 90 bp GCGTTCGGCTGCCGGGCACCTTCATGTACAGCTGCACCGTGTTCATaGCCAGGATGGTGTGGCCCACGTGGCTCAGCATGTTGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: AFGCRAPSCTAAPCS*PGWCGPRGSACCPW
Trigger: CCACGGGCAACATGCTGAGCCACGTGGGCCACACCATCCTGGGCATGAACACGGTGCAGCTGTACATGAAGGTGCCCGGCAGCCGAACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 90 bp GGTCCGGCTCCAGCCGCTCTGATAAGAGTGCCCGCTACCCCCAGATaGCTGCCTCAGTCCTTTCACAGCCAATTCCGGCCTCCGTGGGAG +
Preference number: 5 (lower is better)
Translates to: GPAPAALIRVPATPR*LPQSFHSQFRPPWE
Trigger: CTCCCACGGAGGCCGGAATTGGCTGTGAAAGGACTGAGGCAGCCATCTGGGGGTAGCGGGCACTCTTATCAGAGCGGCTGGAGCCGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CCA 90 bp TTCACCTTGGCATTCCTGCTGGCGCGCACGACGTCAGCAGCACAGTaGCTGATGGTGAGGTCTGCCATGCGCAGCCGCCGCTCTTCCACC +
Preference number: 5 (lower is better)
Translates to: FTLAFLLARTTSAAQ*LMVRSAMRSRRSST
Trigger: GGTGGAAGAGCGGCGGCTGCGCATGGCAGACCTCACCATCAGCCACTGTGCTGCTGACGTCGTGCGCGCCAGCAGGAATGCCAAGGTGAA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGCCTGGGCCAATGTaGATGTTGACGGAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRSPGPM*MLTEQK
Trigger: CTTCTGCTCCGTCAACATCAACATTGGCCCAGGCGA...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp AGGTCCAGCCCAGGCATGTGCTGGTGGCCCCGCGGCGCCTTGCGCGGGCAGGCAATGGGCACGATGGATTaGACGTTCTTCACCTCATTC +
Preference number: 5 (lower is better)
Translates to: RSSPGMCWWPRGALRGQAMGTMD*TFFTSF
Trigger: GAATGAGGTGAAGAACGTCAAATCCATCGTGCCCAT...TGCCTGCCCGCGCAAGGCGCCGCGGGGCCACCAGCACATGCCTGGGCTGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGTCGGGGTCGCTGATTTaGACCGTGCGAGCCACGTTC +
Preference number: 5 (lower is better)
Translates to: VTSMYIHEPRASAPGGRASGSLI*TVRATF
Trigger: GAACGTGGCTCGCACGGTCAAAATCAGCGACCCCGA...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGAAGGGCTGGGCCCGACCCCCTTCTCGGCCACAGGCGGGACCTAGGTCCAGCCCAGAACTTGATCATCTaGAACAAGTCGGGGTCGCTG +
Preference number: 5 (lower is better)
Translates to: GRAGPDPLLGHRRDLGPAQNLII*NKSGSL
Trigger: CAGCGACCCCGACTTGTTCAAGATGATCAAGTTCTG...GGCTGGACCTAGGTCCCGCCTGTGGCCGAGAAGGGGGTCGGGCCCAGCCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGGCCGGAGCCTGGTCCTaGTGTCTGTTGCTAAAAAGG +
Preference number: 5 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSAGAWS*CLLLKR
Trigger: CCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGC...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 90 bp AGCCAGTATGAAAGTTCCAGAGCTGGGCCTGCTGCAGTCGGCCAATaGGGGGCCCCAGCTCAGCGAAGCTTCCTCCGTATCGAAGGGCGC +
Preference number: 5 (lower is better)
Translates to: SQYESSRAGPAAVGQ*GAPAQRSFLRIEGR
Trigger: GCGCCCTTCGATACGGAGGAAGCTTCGCTGAGCTGGGGCCCCGCATTGGCCGACTGCAGCAGGCCCAGCTCTGGAACTTTCATACTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS-3UTR CAA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGACAGCCAGATGGAGTTaGGTGTGCCCTGTCTCATTG +
Preference number: 5 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRTARWS*VCPVSL
Trigger: CAATGAGACAGGGCACACCAAACTCCATCTGGCTGT...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGAGCATCTTCATGATGTaGGCCAGCCCATCAGGTAGG +
Preference number: 5 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRSIFMM*ASPSGR
Trigger: CCTACCTGATGGGCTGGCCAACATCATGAAGATGCT...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTGCTGTTCCTCTTCCTaGCGAATGGATTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRCCSSS*RMDSSS
Trigger: GCTGGACGAATCCATTCGCAAGGAAGAGGAACAGCA...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGTTTTCTTTGGGGACCTaGGCCTTGGCCTTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLFSLGT*ALAFAL
Trigger: CAGGGCAAAGGCCAAGGCCAAGGTCCCCAAAGAAAA...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGGCCGGAGCCTGGTCCTaGTGTCTGTTGCTAAAAAGG +
Preference number: 5 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLAGAWS*CLLLKR
Trigger: CCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGC...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGGAACCCGTATGTGACCCCCGCCGCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCCATCAGGTAGGATCTaGAATTCGGCTGGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GNPYVTPAAAGAWSLCLLPSGRI*NSAGSS
Trigger: TGAGGAGCCAGCCGAATTCAAGATCCTACCTGATGG...CAACAGACACAAGGACCAGGCTCCGGCGGCGGCGGGGGTCACATACGGGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGTTTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTTGACGGAGCAGAAGTaGTTATTCTCCTGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: GLSTMRTRLEPRADGWRRLTEQK*LFSWWP
Trigger: AGGCCACCAGGAGAATAACAACTTCTGCTCCGTCAA...CCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp TCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGGCTGGCCAGAACTTGATCATCTaGAACAAGTCGGGGTCGCTG +
Preference number: 5 (lower is better)
Translates to: SMYIHEPRASAPGGRAAGQNLII*NKSGSL
Trigger: CAGCGACCCCGACTTGTTCAAGATGATCAAGTTCTG...GCCAGCCGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 90 bp AAGGGCGCTGTGGTAGCAGCGTGTGGCCTCCTCACTATCGTGCTCTaGCTCGTACAGTTGCCCAAGCTGTTCCCAAAGCCCTGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: KGAVVAACGLLTIVL*LVQLPKLFPKPWLG
Trigger: GCCCAGCCAGGGCTTTGGGAACAGCTTGGGCAACTGTACGAGTCAGAGCACGATAGTGAGGAGGCCACACGCTGCTACCACAGCGCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CCA 90 bp TGGAGTTTGGTGTGCCCTGTCTCATTGGAACCACCACCCCAGCAGTaGGGTACAACAGACCACAGTGGGTGGGGTGGGCAGTGCTACGGG +
Preference number: 5 (lower is better)
Translates to: WSLVCPVSLEPPPQQ*GTTDHSGWGGQCYG
Trigger: CCCGTAGCACTGCCCACCCCACCCACTGTGGTCTGTTGTACCCCACTGCTGGGGTGGTGGTTCCAATGAGACAGGGCACACCAAACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000571047.5
CDS CCA 90 bp TGCTCTGACTCGTACAGTTGCCCAAGCTGTTCCCAAAGCCCTGGCTaGGCTGGCTCCCGGAGCAATGCCTGCACACAGCCATGCAGGGAT +
Preference number: 5 (lower is better)
Translates to: CSDSYSCPSCSQSPG*AGSRSNACTQPCRD
Trigger: ATCCCTGCATGGCTGTGTGCAGGCATTGCTCCGGGAGCCAGCCCAGCCAGGGCTTTGGGAACAGCTTGGGCAACTGTACGAGTCAGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CCA 90 bp CGAGTGCCTGTCAGATCCCAGTTCTCATCTGAGGGCTGCTGCACCTaGGTGCGAACTTCCACGGTGTGTTCGCCACTCGCTTCCACCAGG +
Preference number: 5 (lower is better)
Translates to: RVPVRSQFSSEGCCT*VRTSTVCSPLASTR
Trigger: CCTGGTGGAAGCGAGTGGCGAACACACCGTGGAAGTTCGCACCCAGGTGCAGCAGCCCTCAGATGAGAACTGGGATCTGACAGGCACTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGCCATCAGGTAGGATCTaGAATTCGGCTGGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAPSGRI*NSAGSS
Trigger: TGAGGAGCCAGCCGAATTCAAGATCCTACCTGATGG...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GTAACGTCTATGTACATACACGAGCCGCGTGCATCTGCGCCGGGCGGGCGGGCGCACGCCTGCTTCGTGTaGTTGCTGTTCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: VTSMYIHEPRASAPGGRAHACFV*LLFLFL
Trigger: AAGGAAGAGGAACAGCAACAACACGAAGCAGGCGTG...CGCCCGCCCGCCCGGCGCAGATGCACGCGGCTCGTGTATGTACATAGACGTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGTGCAGCAGGCAGAACTaGATCATCTTGAACAAGTCG +
Preference number: 5 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSCSRQN*IILNKS
Trigger: CGACTTGTTCAAGATGATCAAGTTCTGCCTGCTGCA...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 90 bp ACACCTCCACATCGCACTCGTTGCAGTAGTAGGCTGGCTCGTCCTTaGCACGGCCCTGGTAAGCGATTTTCTTCCCTGCCCGCACCAGGC +
Preference number: 5 (lower is better)
Translates to: TPPHRTRCSSRLARP*HGPGKRFSSLPAPG
Trigger: GCCTGGTGCGGGCAGGGAAGAAAATCGCTTACCAGGGCCGTGTCAAGGACGAGCCAGCCTACTACTGCAACGAGTGCGATGTGGAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 90 bp GGAATACTGAGTGGTGGGCAAGGGCCCAGGCCGGGTGGAAACAGCTaGTCCAGTCCCCCGATAACAGTACTTTTGTCCCTCCAGCACGGA +
Preference number: 5 (lower is better)
Translates to: GILSGGQGPRPGGNS*SSPPITVLLSLQHG
Trigger: TCCGTGCTGGAGGGACAAAAGTACTGTTATCGGGGGACTGGAGCAGCTGTTTCCACCCGGCCTGGGCCCTTGCCCACCACTCAGTATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 90 bp TGCCTGTCAGATCCCAGTTCTCATCTGAGGGCTGCTGCACCTGGGTaGGAACTTCCACGGTGTGTTCGCCACTCGCTTCCACCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: CLSDPSSHLRAAAPG*ELPRCVRHSLPPGS
Trigger: AGACCCTGGTGGAAGCGAGTGGCGAACACACCGTGGAAGTTCGCACCCAGGTGCAGCAGCCCTCAGATGAGAACTGGGATCTGACAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 90 bp ATCTGCCGAGTGCCTGTCAGATCCCAGTTCTCATCTGAGGGCTGCTaGACCTGGGTGCGAACTTCCACGGTGTGTTCGCCACTCGCTTCC +
Preference number: 5 (lower is better)
Translates to: ICRVPVRSQFSSEGC*TWVRTSTVCSPLAS
Trigger: GGAAGCGAGTGGCGAACACACCGTGGAAGTTCGCACCCAGGTGCAGCAGCCCTCAGATGAGAACTGGGATCTGACAGGCACTCGGCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 90 bp CAGATCTGCCGAGTGCCTGTCAGATCCCAGTTCTCATCTGAGGGCTaGTGCACCTGGGTGCGAACTTCCACGGTGTGTTCGCCACTCGCT +
Preference number: 5 (lower is better)
Translates to: QICRVPVRSQFSSEG*CTWVRTSTVCSPLA
Trigger: AGCGAGTGGCGAACACACCGTGGAAGTTCGCACCCAGGTGCAGCAGCCCTCAGATGAGAACTGGGATCTGACAGGCACTCGGCAGATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp TTGAGCACCATGAGAACCCGGCTGGAGCCGCGGGCGGACGGGTGGAGACGGTCGTCAGACAAGTCGATGTaGGTGCCAAACTTGATGATG +
Preference number: 5 (lower is better)
Translates to: LSTMRTRLEPRADGWRRSSDKSM*VPNLMM
Trigger: CATCATCAAGTTTGGCACCAACATCGACTTGTCTGA...CGACCGTCTCCACCCGTCCGCCCGCGGCTCCAGCCGGGTTCTCATGGTGCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGCCTACAGTACAGGAGTaGCTCACCCTCAGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRPTVQE*LTLRWG
Trigger: GCCCCACCTGAGGGTGAGCAACTCCTGTACTGTAGG...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 90 bp TTGGCAATGGTGGTGTGGGAACGGGAGCTCTCACAAGGCCAGATCTaGCGAGTGCCTGTCAGATCCCAGTTCTCATCTGAGGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LAMVVWERELSQGQI*RVPVRSQFSSEGCC
Trigger: GCAGCAGCCCTCAGATGAGAACTGGGATCTGACAGGCACTCGGCAGATCTGGCCTTGTGAGAGCTCCCGTTCCCACACCACCATTGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 90 bp CTCCGTGGGAGCGTCCTCACACCGCGTCGGCAAGCTCCAGAGATCTaGCCAATCACAGGACTTCCTCTCTCCCCAGAAAGCCAATCATCA +
Preference number: 5 (lower is better)
Translates to: LRGSVLTPRRQAPEI*PITGLPLSPESQSS
Trigger: TGATGATTGGCTTTCTGGGGAGAGAGGAAGTCCTGTGATTGGCCAGATCTCTGGAGCTTGCCGACGCGGTGTGAGGACGCTCCCACGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
ENST00000571047.5
CDS CCA 90 bp CAGCGAAGCTTCCTCCGTATCGAAGGGCGCTGTGGTAGCAGCGTGTaGCCTCCTCACTATCGTGCTCTGACTCGTACAGTTGCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: QRSFLRIEGRCGSSV*PPHYRALTRTVAQA
Trigger: AGCTTGGGCAACTGTACGAGTCAGAGCACGATAGTGAGGAGGCCACACGCTGCTACCACAGCGCCCTTCGATACGGAGGAAGCTTCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CCA 90 bp CAAGGTGTAGCAAGTTCCACACTTGCTCCAGTGGGGGCAGGACCTTaGCTCGGTGCTGGCAGGAGCCAGTATGAAAGTTCCAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: QGVASSTLAPVGAGP*LGAGRSQYESSRAG
Trigger: CCCAGCTCTGGAACTTTCATACTGGCTCCTGCCAGCACCGAGCCAAGGTCCTGCCCCCACTGGAGCAAGTGTGGAACTTGCTACACCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS-3UTR CAA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGGGCGGGCAGGATGGCTaGGGGGTGTGGGAGGTCGGG +
Preference number: 5 (lower is better)
Translates to: GGVKPIERISLKTSAAVTGGQDG*GVWEVG
Trigger: CCCGACCTCCCACACCCCCAAGCCATCCTGCCCGCC...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGGGGGGTGCTGAACCCTaGCGCTCTGGGCCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: GGVKPIERISLKTSAAVTGGAEP*RSGPQA
Trigger: TGCCTGGGGCCCAGAGCGCAAGGGTTCAGCACCCCC...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCGGAGCTGTGGGTGGCTaGGCCTTGGAGGCCCCGCCA +
Preference number: 5 (lower is better)
Translates to: QNTISVPTSSPTVQELLTGAVGG*ALEAPP
Trigger: TGGCGGGGCCTCCAAGGCCAAGCCACCCACAGCTCC...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGTCACCACTCTCTACCTaGATGAGCCGGATCTTCAGC +
Preference number: 5 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRSPLST*MSRIFS
Trigger: GCTGAAGATCCGGCTCATCAAGGTAGAGAGTGGTGA...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGTGGTACTGTGCGTACTaGGCAATGGTGGTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWWYCAY*AMVVWE
Trigger: TTCCCACACCACCATTGCCAAGTACGCACAGTACCA...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGTTGACGGAGCAGAAGTaGTTATTCTCCTGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRLTEQK*LFSWWP
Trigger: AGGCCACCAGGAGAATAACAACTTCTGCTCCGTCAA...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGGGGAGGGGAGCGGGTTaGAGCACCATGAGAACCCGG +
Preference number: 5 (lower is better)
Translates to: GGVKPIERISLKTSAAVTGRGAG*STMRTR
Trigger: CCGGGTTCTCATGGTGCTCAAACCCGCTCCCCTCCC...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 90 bp GAGGTCTCCGGGTCGCTGCACGAAGCGGTACACAGGAATATTGGATaGATAGAGATCATCCAGGATTGGCCACCAGGAACCCGTCAAGTA +
Preference number: 5 (lower is better)
Translates to: EVSGSLHEAVHRNIG*IEIIQDWPPGTRQV
Trigger: TACTTGACGGGTTCCTGGTGGCCAATCCTGGATGATCTCTATGCATCCAATATTCCTGTGTACCGCTTCGTGCAGCGACCCGGAGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 90 bp CAGGATGTTAAACACCTCCACATCGCACTCGTTGCAGTAGTAGGCTaGCTCGTCCTTGACACGGCCCTGGTAAGCGATTTTCTTCCCTGC +
Preference number: 5 (lower is better)
Translates to: QDVKHLHIALVAVVG*LVLDTALVSDFLPC
Trigger: GCAGGGAAGAAAATCGCTTACCAGGGCCGTGTCAAGGACGAGCCAGCCTACTACTGCAACGAGTGCGATGTGGAGGTGTTTAACATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCACGGAGGCCAAGGATTaGAGCAGGCTGGCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: QNTISVPTSSPTVQELLTTEAKD*SRLAGL
Trigger: CAGCCCGGCCAGCCTGCTCAAATCCTTGGCCTCCGT...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTTGGGGACCTTGGCCTaGGCCTTTGCCCTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: GGVKPIERISLKTSAAVTLGTLA*AFALPS
Trigger: TGAGGGCAGGGCAAAGGCCAAGGCCAAGGTCCCCAA...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGGGAGGCGCTGGGCGATAAAGGTCTCCTaGTCACCACTCTCTACCTTG +
Preference number: 5 (lower is better)
Translates to: LVLVSVAKKAKVGEGRRWAIKVS*SPLSTL
Trigger: CAAGGTAGAGAGTGGTGACAAGGAGACCTTTATCGC...CCAGCGCCTCCCCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GCCGCCGGAGCCTGGTCCTTGTGTCTGTTGCTAAAAAGGCCAAAGTCGGTGAGGTGCAGCAGGCAGAACTaGATCATCTTGAACAAGTCG +
Preference number: 5 (lower is better)
Translates to: AAGAWSLCLLLKRPKSVRCSRQN*IILNKS
Trigger: CGACTTGTTCAAGATGATCAAGTTCTGCCTGCTGCA...CCTCACCGACTTTGGCCTTTTTAGCAACAGACACAAGGACCAGGCTCCGGCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAGGCGGGCAGGATGGCTaGGGGGTGTGGGAGGTCGGG +
Preference number: 5 (lower is better)
Translates to: PIERISLKTSAAVTSMYIGGQDG*GVWEVG
Trigger: CCCGACCTCCCACACCCCCAAGCCATCCTGCCCGCC...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 90 bp TGTGATGGGATTTCGAGGGTCTGTACAGAACTGCAGCAGGACAGGTaGGAAGGCATCCCGTTTGCTCTCCAGATAGATGCTGGGTGTAGG +
Preference number: 5 (lower is better)
Translates to: CDGISRVCTELQQDR*EGIPFALQIDAGCR
Trigger: CCTACACCCAGCATCTATCTGGAGAGCAAACGGGATGCCTTCTCACCTGTCCTGCTGCAGTTCTGTACAGACCCTCGAAATCCCATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 90 bp TGCGAGCCACGTTCCATGACACGTGAATCATGGGCACGATGGATTTaGCGTTCTTCACCTCATTCCACTCGTATCGTTCCAGGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: CEPRSMTRESWARWI*RSSPHSTRIVPGPA
Trigger: AGCTGGCCCTGGAACGATACGAGTGGAATGAGGTGAAGAACGTCAAATCCATCGTGCCCATGATTCACGTGTCATGGAACGTGGCTCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 90 bp TCGGGGTCGCTGATTTTGACCGTGCGAGCCACGTTCCATGACACGTaGATCATGGGCACGATGGATTTGACGTTCTTCACCTCATTCCAC +
Preference number: 5 (lower is better)
Translates to: SGSLILTVRATFHDT*IMGTMDLTFFTSFH
Trigger: GTGGAATGAGGTGAAGAACGTCAAATCCATCGTGCCCATGATTCACGTGTCATGGAACGTGGCTCGCACGGTCAAAATCAGCGACCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 90 bp GAACAAGTCGGGGTCGCTGATTTTGACCGTGCGAGCCACGTTCCATaGCACGTGAATCATGGGCACGATGGATTTGACGTTCTTCACCTC +
Preference number: 5 (lower is better)
Translates to: EQVGVADFDRASHVP*HVNHGHDGFDVLHL
Trigger: GAGGTGAAGAACGTCAAATCCATCGTGCCCATGATTCACGTGTCATGGAACGTGGCTCGCACGGTCAAAATCAGCGACCCCGACTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 90 bp GAAGCGGTACACAGGAATATTGGATGCATAGAGATCATCCAGGATTaGCCACCAGGAACCCGTCAAGTAGTCCACGCCGTGCCGATCACA +
Preference number: 5 (lower is better)
Translates to: EAVHRNIGCIEIIQD*PPGTRQVVHAVPIT
Trigger: TGTGATCGGCACGGCGTGGACTACTTGACGGGTTCCTGGTGGCCAATCCTGGATGATCTCTATGCATCCAATATTCCTGTGTACCGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGAGTGGGGGCAGGACCTaGGCTCGGTGCTGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: VKPIERISLKTSAAVTSMSGGRT*ARCWQE
Trigger: CTCCTGCCAGCACCGAGCCAAGGTCCTGCCCCCACT...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCCCCCGGAGACCAGTGTaGCTGCTGCTGCTACTGCTG +
Preference number: 5 (lower is better)
Translates to: QNTISVPTSSPTVQELLTPRRPV*LLLLLL
Trigger: CAGCAGTAGCAGCAGCAGCAACACTGGTCTCCGGGG...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCCGGCGGCTCTTTTCTTaGGGGACCTTGGCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: QNTISVPTSSPTVQELLTRRLFS*GTLALA
Trigger: GGCCAAGGCCAAGGTCCCCAAAGAAAAGAGCCGCCG...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGCTCCAGCGCGGGAGTTaGGTAATGGTCAGCGCCGGG +
Preference number: 5 (lower is better)
Translates to: VKPIERISLKTSAAVTSMLQRGS*VMVSAG
Trigger: CCCGGCGCTGACCATTACCAAACTCCCGCGCTGGAG...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACTCCAGCGCGGGAGTTaGGTAATGGTCAGCGCCGGG +
Preference number: 5 (lower is better)
Translates to: PIERISLKTSAAVTSMYILQRGS*VMVSAG
Trigger: CCCGGCGCTGACCATTACCAAACTCCCGCGCTGGAG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCCTGTGGCTGCCACTGTaGCTGTTGCTACTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: QNTISVPTSSPTVQELLTLWLPL*LLLLLV
Trigger: CACCAGCAGTAGCAACAGCAACAGTGGCAGCCACAG...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTTTTCTTTGGGGACCTaGGCCTTGGCCTTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: GGVKPIERISLKTSAAVTFSLGT*ALAFAL
Trigger: CAGGGCAAAGGCCAAGGCCAAGGTCCCCAAAGAAAA...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCAACTTCCCTTTCACCTaGGCATTCCTGCTGGCGCGC +
Preference number: 5 (lower is better)
Translates to: QNTISVPTSSPTVQELLTNFPFT*AFLLAR
Trigger: GCGCGCCAGCAGGAATGCCAAGGTGAAAGGGAAGTT...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCGCCTGGGCCAATGTaGATGTTGACGGAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: GGVKPIERISLKTSAAVTSPGPM*MLTEQK
Trigger: CTTCTGCTCCGTCAACATCAACATTGGCCCAGGCGA...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGGTGTGCCCTGTCTCATaGGAACCACCACCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: VKPIERISLKTSAAVTSMVCPVS*EPPPQQ
Trigger: CTGCTGGGGTGGTGGTTCCAATGAGACAGGGCACAC...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CAAAATACCATTTCAGTTCCCACTTCTTCCCCTACAGTACAGGAGTTGCTCACCCCAGTCTGTTCAGAGTaGCAGCCTCTCCTTCGCTTG +
Preference number: 5 (lower is better)
Translates to: QNTISVPTSSPTVQELLTPVCSE*QPLLRL
Trigger: CAAGCGAAGGAGAGGCTGCAACTCTGAACAGACTGG...GGTGAGCAACTCCTGTACTGTAGGGGAAGAAGTGGGAACTGAAATGGTATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGAGCATCTTCATGATGTaGGCCAGCCCATCAGGTAGG +
Preference number: 5 (lower is better)
Translates to: GGVKPIERISLKTSAAVTSIFMM*ASPSGR
Trigger: CCTACCTGATGGGCTGGCCAACATCATGAAGATGCT...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATATTGGGGACCTTGGCCTaGGCCTTTGCCCTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: PIERISLKTSAAVTSMYILGTLA*AFALPS
Trigger: TGAGGGCAGGGCAAAGGCCAAGGCCAAGGTCCCCAA...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGGCTTCCACCAGGGTCTaGGTGGAGAAGAGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: VKPIERISLKTSAAVTSMASTRV*VEKRPK
Trigger: CTTGGGCCTCTTCTCCACCAAGACCCTGGTGGAAGC...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGACGTGGCTCAGCATGTaGCCCGTGGATGTTACCCGC +
Preference number: 5 (lower is better)
Translates to: VKPIERISLKTSAAVTSMTWLSM*PVDVTR
Trigger: GCGGGTAACATCCACGGGCAACATGCTGAGCCACGT...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAGTGTGCCCTGTCTCATaGGAACCACCACCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: PIERISLKTSAAVTSMYIVCPVS*EPPPQQ
Trigger: CTGCTGGGGTGGTGGTTCCAATGAGACAGGGCACAC...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATAGCTTCCACCAGGGTCTaGGTGGAGAAGAGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: PIERISLKTSAAVTSMYIASTRV*VEKRPK
Trigger: CTTGGGCCTCTTCTCCACCAAGACCCTGGTGGAAGC...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATATTCCAGGCAATGTTGTaGCACCAGCCGGTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: PIERISLKTSAAVTSMYIFQAML*HQPVAC
Trigger: GCAGGCCACCGGCTGGTGCAACAACATTGCCTGGAA...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACCTACAGTACAGGAGTaGCTCACCCTCAGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: PIERISLKTSAAVTSMYIPTVQE*LTLRWG
Trigger: GCCCCACCTGAGGGTGAGCAACTCCTGTACTGTAGG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACTGTGGCTGCCACTGTaGCTGTTGCTACTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: PIERISLKTSAAVTSMYILWLPL*LLLLLV
Trigger: CACCAGCAGTAGCAACAGCAACAGTGGCAGCCACAG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGAGAGATCATCCAGGATaGGCCACCAGGAACCCGTCA +
Preference number: 5 (lower is better)
Translates to: VKPIERISLKTSAAVTSMRDHPG*ATRNPS
Trigger: TGACGGGTTCCTGGTGGCCAATCCTGGATGATCTCT...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GGAGGGGTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGATGGGCACGATGGATTaGACGTTCTTCACCTCATTC +
Preference number: 5 (lower is better)
Translates to: GGVKPIERISLKTSAAVTMGTMD*TFFTSF
Trigger: GAATGAGGTGAAGAACGTCAAATCCATCGTGCCCAT...CGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTACCCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATACCAGTCTGTTCAGAGTaGCAGCCTCTCCTTCGCTTG +
Preference number: 5 (lower is better)
Translates to: PIERISLKTSAAVTSMYIPVCSE*QPLLRL
Trigger: CAAGCGAAGGAGAGGCTGCAACTCTGAACAGACTGG...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATATGCTGTTCCTCTTCCTaGCGAATGGATTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PIERISLKTSAAVTSMYICCSSS*RMDSSS
Trigger: GCTGGACGAATCCATTCGCAAGGAAGAGGAACAGCA...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp CCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTACATATCACCACTCTCTACCTaGATGAGCCGGATCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PIERISLKTSAAVTSMYISPLST*MSRIFS
Trigger: GCTGAAGATCCGGCTCATCAAGGTAGAGAGTGGTGA...TATGTACATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGGCGATAAAGGTCTCCTaGTCACCACTCTCTACCTTG +
Preference number: 5 (lower is better)
Translates to: VKPIERISLKTSAAVTSMAIKVS*SPLSTL
Trigger: CAAGGTAGAGAGTGGTGACAAGGAGACCTTTATCGC...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS-3UTR CAA 90 bp GTAAAGCCCATAGAAAGAATCTCATTAAAAACCTCGGCTGCCGTAACGTCTATGTCAGACAAGTCGATGTaGGTGCCAAACTTGATGATG +
Preference number: 5 (lower is better)
Translates to: VKPIERISLKTSAAVTSMSDKSM*VPNLMM
Trigger: CATCATCAAGTTTGGCACCAACATCGACTTGTCTGA...CATAGACGTTACGGCAGCCGAGGTTTTTAATGAGATTCTTTCTATGGGCTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 72 bp TCCGCTGCCCGCGCGCCCGCCGGGCCCTCACCAGCGTaGAGGCGTCGTAGGCCTGAGCCAGCTCCTCAGTGC +
Preference number: 6 (lower is better)
Translates to: SAARAPAGPSPA*RRRRPEPAPQC
Trigger: GCACTGAGGAGCTGGCTCAGGCCTACGACGCCTTCACGCTGGTGAGGGCCCGGCGGGCGCGCGGGCAGCGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254846.9
CDS GCA 72 bp AGCACAGCTCAGGCCCCCAAGGGCAAAGGCTTCCCGTaGAGCGCGGGCCCCTGGAGGGTCCACTGCCCGATG +
Preference number: 6 (lower is better)
Translates to: STAQAPKGKGFP*SAGPWRVHCPM
Trigger: CATCGGGCAGTGGACCCTCCAGGGGCCCGCGCTGCACGGGAAGCCTTTGCCCTTGGGGGCCTGAGCTGTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CAA 90 bp GCGCCGGGAATGCCTGGGTTCGGCTCCACGCCCCGGAGACCAGTGTaGCTGCTGCTGCTACTGCTGCTGCTGGTGGTGGTGCCGGGGAGG +
Preference number: 6 (lower is better)
Translates to: APGMPGFGSTPRRPV*LLLLLLLLVVVPGR
Trigger: CCTCCCCGGCACCACCACCAGCAGCAGCAGTAGCAGCAGCAGCAACACTGGTCTCCGGGGCGTGGAGCCGAACCCAGGCATTCCCGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CAA 90 bp GGCAGCGAGTGCCGCTGCTCCTGGCGCTCTGGGGGTGCTGAACCCTaGCGCTCTGGGCCCCAGGCATCTCCATGCAGGGTACTCCACAGC +
Preference number: 6 (lower is better)
Translates to: GSECRCSWRSGGAEP*RSGPQASPCRVLHS
Trigger: GCTGTGGAGTACCCTGCATGGAGATGCCTGGGGCCCAGAGCGCAAGGGTTCAGCACCCCCAGAGCGCCAGGAGCAGCGGCACTCGCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CAA 90 bp CGAGGGCCCCAGGCGGCCATGGTGAGAGACCTCCAGCGCGGGAGTTaGGTAATGGTCAGCGCCGGGAATGCCTGGGTTCGGCTCCACGCC +
Preference number: 6 (lower is better)
Translates to: RGPQAAMVRDLQRGS*VMVSAGNAWVRLHA
Trigger: GGCGTGGAGCCGAACCCAGGCATTCCCGGCGCTGACCATTACCAAACTCCCGCGCTGGAGGTCTCTCACCATGGCCGCCTGGGGCCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 72 bp CAGCGAGTGCCGCTGCTCCTGGCGCTCTGGGGGTGCTaGACCCTTGCGCTCTGGGCCCCAGGCATCTCCATG +
Preference number: 6 (lower is better)
Translates to: QRVPLLLALWGC*TLALWAPGISM
Trigger: CATGGAGATGCCTGGGGCCCAGAGCGCAAGGGTTCAGCACCCCCAGAGCGCCAGGAGCAGCGGCACTCGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 72 bp GAGTGGCAGCGGGAGCCCCCAAGAACGGTTTCCGACTaGTGTGTGCCGAGGGCCCCAGGCGGCCATGGTGAG +
Preference number: 6 (lower is better)
Translates to: EWQREPPRTVSD*CVPRAPGGHGE
Trigger: CTCACCATGGCCGCCTGGGGCCCTCGGCACACAGCAGTCGGAAACCGTTCTTGGGGGCTCCCGCTGCCACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 72 bp CTCAGTCCCACTGTCCGCTGGCTCTGCTGTGTCCACTaGGTCGGCTGGGTCAGTGGCACTCCGGCCCACCCG +
Preference number: 6 (lower is better)
Translates to: LSPTVRWLCCVH*VGWVSGTPAHP
Trigger: CGGGTGGGCCGGAGTGCCACTGACCCAGCCGACCCAGTGGACACAGCAGAGCCAGCGGACAGTGGGACTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 72 bp GCGCAGCTTCAGCATGTCGGCCCGGCTGACACCCGGTaGCCCTGGGGCTTCCTCCCGAGCCTTCTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: AQLQHVGPADTR*PWGFLPSLLSR
Trigger: CCTGGAAAGAAGGCTCGGGAGGAAGCCCCAGGGCCACCGGGTGTCAGCCGGGCCGACATGCTGAAGCTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CAA 72 bp GGGGCCGGGAAGGGGCGTAAGGCACGCAGGCGGTGGTaGCTGCTGGTGAAACGCTGGAGTCCATCCGCGACC +
Preference number: 6 (lower is better)
Translates to: GAGKGRKARRRW*LLVKRWSPSAT
Trigger: GGTCGCGGATGGACTCCAGCGTTTCACCAGCAGCAACCACCGCCTGCGTGCCTTACGCCCCTTCCCGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CAA 90 bp GGAGGCCAGGGGGCCGGGAAGGGGCGTAAGGCACGCAGGCGGTGGTaGCTGCTGGTGAAACGCTGGAGTCCATCCGCGACCTCTGAACTC +
Preference number: 6 (lower is better)
Translates to: GGQGAGKGRKARRRW*LLVKRWSPSATSEL
Trigger: GAGTTCAGAGGTCGCGGATGGACTCCAGCGTTTCACCAGCAGCAACCACCGCCTGCGTGCCTTACGCCCCTTCCCGGCCCCCTGGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS GCA 72 bp AGCGGGAGCCCCCAAGAACGGTTTCCGACTGCTGTGTaGCGAGGGCCCCAGGCGGCCATGGTGAGAGACCTC +
Preference number: 6 (lower is better)
Translates to: SGSPQERFPTAV*RGPQAAMVRDL
Trigger: GAGGTCTCTCACCATGGCCGCCTGGGGCCCTCGGCACACAGCAGTCGGAAACCGTTCTTGGGGGCTCCCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CAA 72 bp TGCCGCTGCTCCTGGCGCTCTGGGGGTGCTGAACCCTaGCGCTCTGGGCCCCAGGCATCTCCATGCAGGGTA +
Preference number: 6 (lower is better)
Translates to: CRCSWRSGGAEP*RSGPQASPCRV
Trigger: TACCCTGCATGGAGATGCCTGGGGCCCAGAGCGCAAGGGTTCAGCACCCCCAGAGCGCCAGGAGCAGCGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 72 bp TGCCTGGGTTCGGCTCCACGCCCCGGAGACCAGTGTTaGTGCTGCTGCTACTGCTGCTGCTGGTGGTGGTGC +
Preference number: 6 (lower is better)
Translates to: CLGSAPRPGDQC*CCCYCCCWWWC
Trigger: GCACCACCACCAGCAGCAGCAGTAGCAGCAGCAGCAACACTGGTCTCCGGGGCGTGGAGCCGAACCCAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CCA 72 bp CCTGGAGATTGGGCACGGCCCCCTGCCCCAGCTCTCTaGGACGATGGTCCGGCTCCAGCCGCTCTGATAAGA +
Preference number: 6 (lower is better)
Translates to: PGDWARPPAPAL*DDGPAPAALIR
Trigger: TCTTATCAGAGCGGCTGGAGCCGGACCATCGTCCCAGAGAGCTGGGGCAGGGGGCCGTGCCCAATCTCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CCA 72 bp CAGAAGGTGCAGGAGCTGATGGAGGGGCTGGAGCTGTaGGTGGCTTGGCCTTGGAGGCCCCGCCAAGATCGG +
Preference number: 6 (lower is better)
Translates to: QKVQELMEGLEL*VAWPWRPRQDR
Trigger: CCGATCTTGGCGGGGCCTCCAAGGCCAAGCCACCCACAGCTCCAGCCCCTCCATCAGCTCCTGCACCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 72 bp GGAAGGAGACCCTGGGCCGGGGGCTCTCCGGGCGCCTaGAGCTTCCTGAGGTATTTTGGTGGCAGGAGGAAG +
Preference number: 6 (lower is better)
Translates to: GRRPWAGGSPGA*SFLRYFGGRRK
Trigger: CTTCCTCCTGCCACCAAAATACCTCAGGAAGCTTCAGGCGCCCGGAGAGCCCCCGGCCCAGGGTCTCCTTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 72 bp GTAGGGCTGGTGGTGGCTTCTTCTCCTCTTCCTGGGTaGCCGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: VGLVVASSPLPG*PWWWWWWWWWW
Trigger: CCACCACCACCACCACCACCACCACCACCACGGCCACCCAGGAAGAGGAGAAGAAGCCACCACCAGCCCTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CAA 72 bp ATGCCTGGGTTCGGCTCCACGCCCCGGAGACCAGTGTaGCTGCTGCTGCTACTGCTGCTGCTGGTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: MPGFGSTPRRPV*LLLLLLLLVVV
Trigger: CACCACCACCAGCAGCAGCAGTAGCAGCAGCAGCAACACTGGTCTCCGGGGCGTGGAGCCGAACCCAGGCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CAA 72 bp CAGGCGGCCATGGTGAGAGACCTCCAGCGCGGGAGTTaGGTAATGGTCAGCGCCGGGAATGCCTGGGTTCGG +
Preference number: 6 (lower is better)
Translates to: QAAMVRDLQRGS*VMVSAGNAWVR
Trigger: CCGAACCCAGGCATTCCCGGCGCTGACCATTACCAAACTCCCGCGCTGGAGGTCTCTCACCATGGCCGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 72 bp CGTGGCTCAGCATGTTGCCCGTGGATGTTACCCGCATaGAGGCGGGCAGCTTCAGCAGCTCCTGCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: RGSACCPWMLPA*RRAASAAPAAG
Trigger: CCCAGCTGCAGGAGCTGCTGAAGCTGCCCGCCTTCATGCGGGTAACATCCACGGGCAACATGCTGAGCCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 72 bp GAAAGTTCCAGAGCTGGGCCTGCTGCAGTCGGCCAATaGGGGGCCCCAGCTCAGCGAAGCTTCCTCCGTATC +
Preference number: 6 (lower is better)
Translates to: ESSRAGPAAVGQ*GAPAQRSFLRI
Trigger: GATACGGAGGAAGCTTCGCTGAGCTGGGGCCCCGCATTGGCCGACTGCAGCAGGCCCAGCTCTGGAACTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CCA 72 bp CAGTTGCCCAAGCTGTTCCCAAAGCCCTGGCTGGGCTaGCTCCCGGAGCAATGCCTGCACACAGCCATGCAG +
Preference number: 6 (lower is better)
Translates to: QLPKLFPKPWLG*LPEQCLHTAMQ
Trigger: CTGCATGGCTGTGTGCAGGCATTGCTCCGGGAGCCAGCCCAGCCAGGGCTTTGGGAACAGCTTGGGCAACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS TCA 72 bp AGGGGCGTAAGGCACGCAGGCGGTGGTTGCTGCTGGTaGAACGCTGGAGTCCATCCGCGACCTCTGAACTCT +
Preference number: 6 (lower is better)
Translates to: RGVRHAGGGCCW*NAGVHPRPLNS
Trigger: AGAGTTCAGAGGTCGCGGATGGACTCCAGCGTTTCACCAGCAGCAACCACCGCCTGCGTGCCTTACGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS TCA 72 bp TCCTTACAGGCCCGCCTGTGCCGCCGATGCTCCTTCTaGTGCTCCTTCTGTCGCCGCTTACAGCTGCCTGAC +
Preference number: 6 (lower is better)
Translates to: SLQARLCRRCSF*CSFCRRLQLPD
Trigger: GTCAGGCAGCTGTAAGCGGCGACAGAAGGAGCATCAGAAGGAGCATCGGCGGCACAGGCGGGCCTGTAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 72 bp TGGGCTGGCTCCCGGAGCAATGCCTGCACACAGCCATaGAGGGATTCCAGCTTCCCATGGAGGGGTCTTGGA +
Preference number: 6 (lower is better)
Translates to: WAGSRSNACTQP*RDSSFPWRGLG
Trigger: TCCAAGACCCCTCCATGGGAAGCTGGAATCCCTGCATGGCTGTGTGCAGGCATTGCTCCGGGAGCCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CCA 72 bp TCGTACAGTTGCCCAAGCTGTTCCCAAAGCCCTGGCTaGGCTGGCTCCCGGAGCAATGCCTGCACACAGCCA +
Preference number: 6 (lower is better)
Translates to: SYSCPSCSQSPG*AGSRSNACTQP
Trigger: TGGCTGTGTGCAGGCATTGCTCCGGGAGCCAGCCCAGCCAGGGCTTTGGGAACAGCTTGGGCAACTGTACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CCA 72 bp GACTGCAGAGATGCAAAGGGCTCCTTCAGCGGGGGTTaGGGGGCCACGCCTGCTTCGTGTTGTTGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: DCRDAKGSFSGG*GATPASCCCCS
Trigger: GGAACAGCAACAACACGAAGCAGGCGTGGCCCCCCAACCCCCGCTGAAGGAGCCCTTTGCATCTCTGCAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CAA 72 bp TCCACGGTGTGTTCGCCACTCGCTTCCACCAGGGTCTaGGTGGAGAAGAGGCCCAAGTTGAGCCGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: STVCSPLASTRV*VEKRPKLSRRE
Trigger: CTCCCTGCGGCTCAACTTGGGCCTCTTCTCCACCAAGACCCTGGTGGAAGCGAGTGGCGAACACACCGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CAA 90 bp AGGCCGGGTGGAAACAGCTGCTCCAGTCCCCCGATAACAGTACTTTaGTCCCTCCAGCACGGAGGCCAAGGATTTGAGCAGGCTGGCCGG +
Preference number: 6 (lower is better)
Translates to: RPGGNSCSSPPITVL*SLQHGGQGFEQAGR
Trigger: CCGGCCAGCCTGCTCAAATCCTTGGCCTCCGTGCTGGAGGGACAAAAGTACTGTTATCGGGGGACTGGAGCAGCTGTTTCCACCCGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CAA 90 bp GCGCTGCGGCGCCGGGCACAGCCCTCGCAGTGTACCAGGTACGTGTaGCGGCTGCCATTCTCACTTGTCACGAACAGGATGTTAAACACC +
Preference number: 6 (lower is better)
Translates to: ALRRRAQPSQCTRYV*RLPFSLVTNRMLNT
Trigger: GGTGTTTAACATCCTGTTCGTGACAAGTGAGAATGGCAGCCGCAACACGTACCTGGTACACTGCGAGGGCTGTGCCCGGCGCCGCAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 72 bp CCTGCCCGCACCAGGCTCTCGCGTTGCACCTGGCAGTaGTTCATGGACTGCAGCAGGCAGAACTTGATCATC +
Preference number: 6 (lower is better)
Translates to: PARTRLSRCTWQ*FMDCSRQNLII
Trigger: GATGATCAAGTTCTGCCTGCTGCAGTCCATGAAGCACTGCCAGGTGCAACGCGAGAGCCTGGTGCGGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 72 bp CCAGCCGCTCTGATAAGAGTGCCCGCTACCCCCAGATaGCTGCCTCAGTCCTTTCACAGCCAATTCCGGCCT +
Preference number: 6 (lower is better)
Translates to: PAALIRVPATPR*LPQSFHSQFRP
Trigger: AGGCCGGAATTGGCTGTGAAAGGACTGAGGCAGCCATCTGGGGGTAGCGGGCACTCTTATCAGAGCGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CCA 72 bp AAGGCACGCAGGCGGTGGTTGCTGCTGGTGAAACGCTaGAGTCCATCCGCGACCTCTGAACTCTGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: KARRRWLLLVKR*SPSATSELCSL
Trigger: GAGAGAGCAGAGTTCAGAGGTCGCGGATGGACTCCAGCGTTTCACCAGCAGCAACCACCGCCTGCGTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CCA 72 bp ATTCGGCTGGCTCCTCAAACTGGTCCTCCAGCGGAGTaGGGGGAAAATCAAAGAGTCGAGGGCCTCGGGCAG +
Preference number: 6 (lower is better)
Translates to: IRLAPQTGPPAE*GENQRVEGLGQ
Trigger: CTGCCCGAGGCCCTCGACTCTTTGATTTTCCCCCCACTCCGCTGGAGGACCAGTTTGAGGAGCCAGCCGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 72 bp TGCACCGTGTTCATGCCCAGGATGGTGTGGCCCACGTaGCTCAGCATGTTGCCCGTGGATGTTACCCGCATG +
Preference number: 6 (lower is better)
Translates to: CTVFMPRMVWPT*LSMLPVDVTRM
Trigger: CATGCGGGTAACATCCACGGGCAACATGCTGAGCCACGTGGGCCACACCATCCTGGGCATGAACACGGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 72 bp TTCTTCCCTGCCCGCACCAGGCTCTCGCGTTGCACCTaGCAGTGCTTCATGGACTGCAGCAGGCAGAACTTG +
Preference number: 6 (lower is better)
Translates to: FFPARTRLSRCT*QCFMDCSRQNL
Trigger: CAAGTTCTGCCTGCTGCAGTCCATGAAGCACTGCCAGGTGCAACGCGAGAGCCTGGTGCGGGCAGGGAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 72 bp GATCTGCCGAGTGCCTGTCAGATCCCAGTTCTCATCTaGGGGCTGCTGCACCTGGGTGCGAACTTCCACGGT +
Preference number: 6 (lower is better)
Translates to: DLPSACQIPVLI*GLLHLGANFHG
Trigger: ACCGTGGAAGTTCGCACCCAGGTGCAGCAGCCCTCAGATGAGAACTGGGATCTGACAGGCACTCGGCAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 72 bp TCAAGTAGTCCACGCCGTGCCGATCACAGAAAGCGCTaGTGGTCTCCCAGTAGTGCTCGTGCACCGCGAACC +
Preference number: 6 (lower is better)
Translates to: SSSPRRADHRKR*WSPSSARAPRT
Trigger: GGTTCGCGGTGCACGAGCACTACTGGGAGACCATCAGCGCTTTCTGTGATCGGCACGGCGTGGACTACTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 72 bp GTGCCTGTCAGATCCCAGTTCTCATCTGAGGGCTGCTaGACCTGGGTGCGAACTTCCACGGTGTGTTCGCCA +
Preference number: 6 (lower is better)
Translates to: VPVRSQFSSEGC*TWVRTSTVCSP
Trigger: TGGCGAACACACCGTGGAAGTTCGCACCCAGGTGCAGCAGCCCTCAGATGAGAACTGGGATCTGACAGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 72 bp CGAGTGCCTGTCAGATCCCAGTTCTCATCTGAGGGCTaGTGCACCTGGGTGCGAACTTCCACGGTGTGTTCG +
Preference number: 6 (lower is better)
Translates to: RVPVRSQFSSEG*CTWVRTSTVCS
Trigger: CGAACACACCGTGGAAGTTCGCACCCAGGTGCAGCAGCCCTCAGATGAGAACTGGGATCTGACAGGCACTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 72 bp GCCGGGCACAGCCCTCGCAGTGTACCAGGTACGTGTTaGGGCTGCCATTCTCACTTGTCACGAACAGGATGT +
Preference number: 6 (lower is better)
Translates to: AGHSPRSVPGTC*GCHSHLSRTGC
Trigger: ACATCCTGTTCGTGACAAGTGAGAATGGCAGCCGCAACACGTACCTGGTACACTGCGAGGGCTGTGCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 72 bp GCAAGTTCCACACTTGCTCCAGTGGGGGCAGGACCTTaGCTCGGTGCTGGCAGGAGCCAGTATGAAAGTTCC +
Preference number: 6 (lower is better)
Translates to: ASSTLAPVGAGP*LGAGRSQYESS
Trigger: GGAACTTTCATACTGGCTCCTGCCAGCACCGAGCCAAGGTCCTGCCCCCACTGGAGCAAGTGTGGAACTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CCA 72 bp GTTCAGCAGCTCGCTTCACCGGGGGACCTCCCCGCTTaGCTCCATAGTTCCGTTTGTGCTCAAGGTGTAGCA +
Preference number: 6 (lower is better)
Translates to: VQQLASPGDLPA*LHSSVCAQGVA
Trigger: TGCTACACCTTGAGCACAAACGGAACTATGGAGCCAAGCGGGGAGGTCCCCCGGTGAAGCGAGCTGCTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CCA 72 bp GTCAGATCCCAGTTCTCATCTGAGGGCTGCTGCACCTaGGTGCGAACTTCCACGGTGTGTTCGCCACTCGCT +
Preference number: 6 (lower is better)
Translates to: VRSQFSSEGCCT*VRTSTVCSPLA
Trigger: AGCGAGTGGCGAACACACCGTGGAAGTTCGCACCCAGGTGCAGCAGCCCTCAGATGAGAACTGGGATCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 72 bp GTGGTAGCAGCGTGTGGCCTCCTCACTATCGTGCTCTaGCTCGTACAGTTGCCCAAGCTGTTCCCAAAGCCC +
Preference number: 6 (lower is better)
Translates to: VVAACGLLTIVL*LVQLPKLFPKP
Trigger: GGGCTTTGGGAACAGCTTGGGCAACTGTACGAGTCAGAGCACGATAGTGAGGAGGCCACACGCTGCTACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS TCA 72 bp CATCGCACTCGTTGCAGTAGTAGGCTGGCTCGTCCTTaGCACGGCCCTGGTAAGCGATTTTCTTCCCTGCCC +
Preference number: 6 (lower is better)
Translates to: HRTRCSSRLARP*HGPGKRFSSLP
Trigger: GGGCAGGGAAGAAAATCGCTTACCAGGGCCGTGTCAAGGACGAGCCAGCCTACTACTGCAACGAGTGCGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 72 bp GTCTCCGCCTCAGTAACAGCCAGATGGAGTTTGGTGTaGCCTGTCTCATTGGAACCACCACCCCAGCAGTGG +
Preference number: 6 (lower is better)
Translates to: VSASVTARWSLV*PVSLEPPPQQW
Trigger: CCACTGCTGGGGTGGTGGTTCCAATGAGACAGGGCACACCAAACTCCATCTGGCTGTTACTGAGGCGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 72 bp GTCTTGGAGTGGGCGCCCCTGGAGCATAATATGGTTTaGTGGGGTGCCCAGAACTACTGCCATGTGAAGGGG +
Preference number: 6 (lower is better)
Translates to: VLEWAPLEHNMV*WGAQNYCHVKG
Trigger: CCCCTTCACATGGCAGTAGTTCTGGGCACCCCAGCAAACCATATTATGCTCCAGGGGCGCCCACTCCAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS GCA 72 bp TTCCGTTTGTGCTCAAGGTGTAGCAAGTTCCACACTTaGTCCAGTGGGGGCAGGACCTTGGCTCGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: FRLCSRCSKFHT*SSGGRTLARCW
Trigger: CCAGCACCGAGCCAAGGTCCTGCCCCCACTGGAGCAAGTGTGGAACTTGCTACACCTTGAGCACAAACGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS GCA 72 bp GTGGTGTGGGAACGGGAGCTCTCACAAGGCCAGATCTaGCGAGTGCCTGTCAGATCCCAGTTCTCATCTGAG +
Preference number: 6 (lower is better)
Translates to: VVWERELSQGQI*RVPVRSQFSSE
Trigger: CTCAGATGAGAACTGGGATCTGACAGGCACTCGGCAGATCTGGCCTTGTGAGAGCTCCCGTTCCCACACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 72 bp GCCATGCAGGGATTCCAGCTTCCCATGGAGGGGTCTTaGAGTGGGCGCCCCTGGAGCATAATATGGTTTGCT +
Preference number: 6 (lower is better)
Translates to: AMQGFQLPMEGS*SGRPWSIIWFA
Trigger: AGCAAACCATATTATGCTCCAGGGGCGCCCACTCCAAGACCCCTCCATGGGAAGCTGGAATCCCTGCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CAA 72 bp AGCCATGCAGGGATTCCAGCTTCCCATGGAGGGGTCTaGGAGTGGGCGCCCCTGGAGCATAATATGGTTTGC +
Preference number: 6 (lower is better)
Translates to: SHAGIPASHGGV*EWAPLEHNMVC
Trigger: GCAAACCATATTATGCTCCAGGGGCGCCCACTCCAAGACCCCTCCATGGGAAGCTGGAATCCCTGCATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CAA 90 bp TCGTCCAGCATCTTCATGATGTTGGCCAGCCCATCAGGTAGGATCTaGAATTCGGCTGGCTCCTCAAACTGGTCCTCCAGCGGAGTGGGG +
Preference number: 6 (lower is better)
Translates to: SSSIFMMLASPSGRI*NSAGSSNWSSSGVG
Trigger: CCCCACTCCGCTGGAGGACCAGTTTGAGGAGCCAGCCGAATTCAAGATCCTACCTGATGGGCTGGCCAACATCATGAAGATGCTGGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CAA 90 bp ATGCGCAGCCGCCGCTCTTCCACCTCAGAGGCGATAAAGGTCTCCTaGTCACCACTCTCTACCTTGATGAGCCGGATCTTCAGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: MRSRRSSTSEAIKVS*SPLSTLMSRIFSSL
Trigger: CAAGGAGCTGAAGATCCGGCTCATCAAGGTAGAGAGTGGTGACAAGGAGACCTTTATCGCCTCTGAGGTGGAAGAGCGGCGGCTGCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 72 bp TTGGAGTGGGCGCCCCTGGAGCATAATATGGTTTGCTaGGGTGCCCAGAACTACTGCCATGTGAAGGGGGTA +
Preference number: 6 (lower is better)
Translates to: LEWAPLEHNMVC*GAQNYCHVKGV
Trigger: TACCCCCTTCACATGGCAGTAGTTCTGGGCACCCCAGCAAACCATATTATGCTCCAGGGGCGCCCACTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CCA 72 bp TTCCTCCGTATCGAAGGGCGCTGTGGTAGCAGCGTGTaGCCTCCTCACTATCGTGCTCTGACTCGTACAGTT +
Preference number: 6 (lower is better)
Translates to: FLRIEGRCGSSV*PPHYRALTRTV
Trigger: AACTGTACGAGTCAGAGCACGATAGTGAGGAGGCCACACGCTGCTACCACAGCGCCCTTCGATACGGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254846.9
ENST00000448097.7
ENST00000570632.1
CDS CCA 72 bp GTAACAGCCCAGTTCCTCCAGGTCCTCTACTTCCCCTaGCTTTCTGGGTCTTCAATACCGACCGACCCCCAA +
Preference number: 6 (lower is better)
Translates to: VTAQFLQVLYFP*LSGSSIPTDPQ
Trigger: TTGGGGGTCGGTCGGTATTGAAGACCCAGAAAGCCAGGGGAAGTAGAGGACCTGGAGGAACTGGGCTGTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575521.1
CDS CCA 72 bp TGTAGCACAGATGGAGTTTGGTGTGCCCTGTCTCATTaGAACCACCACCCCAGCAGTGGGGTACAACAGACC +
Preference number: 6 (lower is better)
Translates to: CSTDGVWCALSH*NHHPSSGVQQT
Trigger: GGTCTGTTGTACCCCACTGCTGGGGTGGTGGTTCCAATGAGACAGGGCACACCAAACTCCATCTGTGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571047.5
CDS CAA 72 bp GTAACAGCCAGATGGAGTTTGGTGTGCCCTGTCTCATaGGAACCACCACCCCAGCAGTGGGGTACAACAGAC +
Preference number: 6 (lower is better)
Translates to: VTARWSLVCPVS*EPPPQQWGTTD
Trigger: GTCTGTTGTACCCCACTGCTGGGGTGGTGGTTCCAATGAGACAGGGCACACCAAACTCCATCTGGCTGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CAA 72 bp GGAAACAGCTGCTCCAGTCCCCCGATAACAGTACTTTaGTCCCTCCAGCACGGAGGCCAAGGATTTGAGCAG +
Preference number: 6 (lower is better)
Translates to: GNSCSSPPITVL*SLQHGGQGFEQ
Trigger: CTGCTCAAATCCTTGGCCTCCGTGCTGGAGGGACAAAAGTACTGTTATCGGGGGACTGGAGCAGCTGTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CAA 72 bp CGCCGCTCTTCCACCTCAGAGGCGATAAAGGTCTCCTaGTCACCACTCTCTACCTTGATGAGCCGGATCTTC +
Preference number: 6 (lower is better)
Translates to: RRSSTSEAIKVS*SPLSTLMSRIF
Trigger: GAAGATCCGGCTCATCAAGGTAGAGAGTGGTGACAAGGAGACCTTTATCGCCTCTGAGGTGGAAGAGCGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CAA 90 bp CGAAGCGGTACACAGGAATATTGGATGCATAGAGATCATCCAGGATaGGCCACCAGGAACCCGTCAAGTAGTCCACGCCGTGCCGATCAC +
Preference number: 6 (lower is better)
Translates to: RSGTQEYWMHRDHPG*ATRNPSSSPRRADH
Trigger: GTGATCGGCACGGCGTGGACTACTTGACGGGTTCCTGGTGGCCAATCCTGGATGATCTCTATGCATCCAATATTCCTGTGTACCGCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 72 bp GGGGTCGCTGATTTTGACCGTGCGAGCCACGTTCCATaGCACGTGAATCATGGGCACGATGGATTTGACGTT +
Preference number: 6 (lower is better)
Translates to: GVADFDRASHVP*HVNHGHDGFDV
Trigger: AACGTCAAATCCATCGTGCCCATGATTCACGTGTCATGGAACGTGGCTCGCACGGTCAAAATCAGCGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 72 bp GGGTCGCTGCACGAAGCGGTACACAGGAATATTGGATaGATAGAGATCATCCAGGATTGGCCACCAGGAACC +
Preference number: 6 (lower is better)
Translates to: GSLHEAVHRNIG*IEIIQDWPPGT
Trigger: GGTTCCTGGTGGCCAATCCTGGATGATCTCTATGCATCCAATATTCCTGTGTACCGCTTCGTGCAGCGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 72 bp AAACACCTCCACATCGCACTCGTTGCAGTAGTAGGCTaGCTCGTCCTTGACACGGCCCTGGTAAGCGATTTT +
Preference number: 6 (lower is better)
Translates to: KHLHIALVAVVG*LVLDTALVSDF
Trigger: AAAATCGCTTACCAGGGCCGTGTCAAGGACGAGCCAGCCTACTACTGCAACGAGTGCGATGTGGAGGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS GCA 72 bp ATCACTGTGATGGGATTTCGAGGGTCTGTACAGAACTaGAGCAGGACAGGTGAGAAGGCATCCCGTTTGCTC +
Preference number: 6 (lower is better)
Translates to: ITVMGFRGSVQN*SRTGEKASRLL
Trigger: GAGCAAACGGGATGCCTTCTCACCTGTCCTGCTGCAGTTCTGTACAGACCCTCGAAATCCCATCACAGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 72 bp CACAGGAATATTGGATGCATAGAGATCATCCAGGATTaGCCACCAGGAACCCGTCAAGTAGTCCACGCCGTG +
Preference number: 6 (lower is better)
Translates to: HRNIGCIEIIQD*PPGTRQVVHAV
Trigger: CACGGCGTGGACTACTTGACGGGTTCCTGGTGGCCAATCCTGGATGATCTCTATGCATCCAATATTCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CAA 72 bp ATCTTCATGATGTTGGCCAGCCCATCAGGTAGGATCTaGAATTCGGCTGGCTCCTCAAACTGGTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: IFMMLASPSGRI*NSAGSSNWSSS
Trigger: GCTGGAGGACCAGTTTGAGGAGCCAGCCGAATTCAAGATCCTACCTGATGGGCTGGCCAACATCATGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CAA 90 bp TGTTCCTCTTCCTTGCGAATGGATTCGTCCAGCATCTTCATGATGTaGGCCAGCCCATCAGGTAGGATCTTGAATTCGGCTGGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: CSSSLRMDSSSIFMM*ASPSGRILNSAGSS
Trigger: TGAGGAGCCAGCCGAATTCAAGATCCTACCTGATGGGCTGGCCAACATCATGAAGATGCTGGACGAATCCATTCGCAAGGAAGAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 72 bp ATTTCGAGGGTCTGTACAGAACTGCAGCAGGACAGGTaGGAAGGCATCCCGTTTGCTCTCCAGATAGATGCT +
Preference number: 6 (lower is better)
Translates to: ISRVCTELQQDR*EGIPFALQIDA
Trigger: AGCATCTATCTGGAGAGCAAACGGGATGCCTTCTCACCTGTCCTGCTGCAGTTCTGTACAGACCCTCGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS TCA 72 bp CTGATTTTGACCGTGCGAGCCACGTTCCATGACACGTaGATCATGGGCACGATGGATTTGACGTTCTTCACC +
Preference number: 6 (lower is better)
Translates to: LILTVRATFHDT*IMGTMDLTFFT
Trigger: GGTGAAGAACGTCAAATCCATCGTGCCCATGATTCACGTGTCATGGAACGTGGCTCGCACGGTCAAAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CAA 72 bp ACACAGGAATATTGGATGCATAGAGATCATCCAGGATaGGCCACCAGGAACCCGTCAAGTAGTCCACGCCGT +
Preference number: 6 (lower is better)
Translates to: TQEYWMHRDHPG*ATRNPSSSPRR
Trigger: ACGGCGTGGACTACTTGACGGGTTCCTGGTGGCCAATCCTGGATGATCTCTATGCATCCAATATTCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CAA 72 bp TCCTTGCGAATGGATTCGTCCAGCATCTTCATGATGTaGGCCAGCCCATCAGGTAGGATCTTGAATTCGGCT +
Preference number: 6 (lower is better)
Translates to: SLRMDSSSIFMM*ASPSGRILNSA
Trigger: AGCCGAATTCAAGATCCTACCTGATGGGCTGGCCAACATCATGAAGATGCTGGACGAATCCATTCGCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254846.9
ENST00000448097.7
CDS CCA 72 bp AGATCTGGAAGGAAAGGTGAAATGCCAAGACTGCTGTaGCTGGCAGTGATCTCCACTATCTCCCCAAATAAA +
Preference number: 6 (lower is better)
Translates to: RSGRKGEMPRLL*LAVISTISPNK
Trigger: TTTATTTGGGGAGATAGTGGAGATCACTGCCAGCCACAGCAGTCTTGGCATTTCACCTTTCCTTCCAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572030.1