RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KDM4C (Homo sapiens)

Ensembl gene IDs: ENSG00000107077

Ensembl transcript IDs: ENST00000381306.7, ENST00000381309.8, ENST00000401787.7, ENST00000420847.2, ENST00000428870.6, ENST00000438023.5, ENST00000466673.1, ENST00000480996.1, ENST00000489243.5, ENST00000490806.5, ENST00000495890.1, ENST00000496464.1, ENST00000536108.5, ENST00000543771.5

Found 1042 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATaGCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCCTTCATCT +
Preference number: 1 (lower is better)
Translates to: LETRFTTVRDTPCHL*QQNSRHSPKDVPSS
Trigger: AGATGAAGGGACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR GCA 90 bp TGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTaGCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTG +
Preference number: 1 (lower is better)
Translates to: CGKYINYRPTRWVPR*HLLELEREVPVCFL
Trigger: CAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR CCA 90 bp ATCTGGCTTGTGGTACGGCATGAGCAGAGTGCAGATGGCACAGTGTaGCTTCATCCTGGCCACTGTTGCATTATACTCTTGCTCAGCTGC +
Preference number: 1 (lower is better)
Translates to: IWLVVRHEQSADGTV*LHPGHCCIILLLSC
Trigger: GCAGCTGAGCAAGAGTATAATGCAACAGTGGCCAGGATGAAGCCACACTGTGCCATCTGCACTCTGCTCATGCCGTACCACAAGCCAGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR GCA 90 bp TTCATCACTTGGCGCCTGCTGCTTCACAAGAGTCATCGGAGATCTTaGTGGAGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTTT +
Preference number: 1 (lower is better)
Translates to: FITWRLLLHKSHRRS*WRPAKWMAPTLRGF
Trigger: AAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR GCA 90 bp ATGGCACAGTGTGGCTTCATCCTGGCCACTGTTGCATTATACTCTTaGTCAGCTGCGAAGTTAGGGGACTTCGTCTGCCAAAGGTGGATG +
Preference number: 1 (lower is better)
Translates to: MAQCGFILATVALYS*SAAKLGDFVCQRWM
Trigger: CATCCACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCTGAGCAAGAGTATAATGCAACAGTGGCCAGGATGAAGCCACACTGTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR CCA 90 bp TACTCTTGCTCAGCTGCGAAGTTAGGGGACTTCGTCTGCCAAAGGTaGATGAGAGGTTTCGCCCAAGACTCTGTTTCTTCCACTTCCTCC +
Preference number: 1 (lower is better)
Translates to: YSCSAAKLGDFVCQR*MRGFAQDSVSSTSS
Trigger: GGAGGAAGTGGAAGAAACAGAGTCTTGGGCGAAACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCTGAGCAAGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR GCA 90 bp GTGTGGCTTCATCCTGGCCACTGTTGCATTATACTCTTGCTCAGCTaGGAAGTTAGGGGACTTCGTCTGCCAAAGGTGGATGAGAGGTTT +
Preference number: 1 (lower is better)
Translates to: VWLHPGHCCIILLLS*EVRGLRLPKVDERF
Trigger: AAACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCTGAGCAAGAGTATAATGCAACAGTGGCCAGGATGAAGCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR CCA 90 bp CTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCTAAGTaGATGGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCTGCTAT +
Preference number: 1 (lower is better)
Translates to: LLHKSHRRSCWRPAK*MAPTLRGFVLSLCY
Trigger: ATAGCAGAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR GCA 90 bp GTTGCATTATACTCTTGCTCAGCTGCGAAGTTAGGGGACTTCGTCTaGCAAAGGTGGATGAGAGGTTTCGCCCAAGACTCTGTTTCTTCC +
Preference number: 1 (lower is better)
Translates to: VALYSCSAAKLGDFV*QRWMRGFAQDSVSS
Trigger: GGAAGAAACAGAGTCTTGGGCGAAACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCTGAGCAAGAGTATAATGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR CCA 90 bp TTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATaGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCTGCTATACTG +
Preference number: 1 (lower is better)
Translates to: FTRVIGDLAGGLLSG*RQLLEVLFSPSAIL
Trigger: CAGTATAGCAGAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR TCA 90 bp ATCCATGACAGAACAATGCTCAAGATGTTCTCCTGGTGTGTATTCTaGACTCAGGATTGGATACTGCCTCCTTCCAGCGCTGGCTTCTTT +
Preference number: 1 (lower is better)
Translates to: IHDRTMLKMFSWCVF*TQDWILPPSSAGFF
Trigger: AAAGAAGCCAGCGCTGGAAGGAGGCAGTATCCAATCCTGAGTTCAGAATACACACCAGGAGAACATCTTGAGCATTGTTCTGTCATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR TCA 90 bp TCAGATTGCTGCGTCCAATTCATTGGGTGTATTTTGTATTTTTGGTaGCCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACC +
Preference number: 1 (lower is better)
Translates to: SDCCVQFIGCILYFW*PNSGNPIYHCQRHT
Trigger: GGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATACAAAATACACCCAATGAATTGGACGCAGCAATCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR GCA 90 bp GACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTCAGGATaGATCCAAATCATTAACCTGATGCACCTTGGAAAGCTTTTGATT +
Preference number: 1 (lower is better)
Translates to: DSYYNASMLQETTSG*IQIINLMHLGKLLI
Trigger: AATCAAAAGCTTTCCAAGGTGCATCAGGTTAATGATTTGGATGCATCCTGAGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR CCA 90 bp AGTGTAGTTTATGTGAGGCCAAAGACAATTCTTCTTCTTCAAGTATaGCCCAGGGATGCAAAAAGATTGGACATCCCTGATTTAAGAAAA +
Preference number: 1 (lower is better)
Translates to: SVVYVRPKTILLLQV*PRDAKRLDIPDLRK
Trigger: TTTTCTTAAATCAGGGATGTCCAATCTTTTTGCATCCCTGGGCCATACTTGAAGAAGAAGAATTGTCTTTGGCCTCACATAAACTACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381306.7
3UTR GCA 90 bp ATACACCTAATGAAAATATTGTGTTTTCCATCCATGACAGAACAATaGTCAAGATGTTCTCCTGGTGTGTATTCTGAACTCAGGATTGGA +
Preference number: 1 (lower is better)
Translates to: IHLMKILCFPSMTEQ*SRCSPGVYSELRIG
Trigger: TCCAATCCTGAGTTCAGAATACACACCAGGAGAACATCTTGAGCATTGTTCTGTCATGGATGGAAAACACAATATTTTCATTAGGTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR TCA 90 bp AATAGACAGACATTCAATTATGCCGAGTCCCCTTTGATCTACTCCTaGATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCT +
Preference number: 1 (lower is better)
Translates to: NRQTFNYAESPLIYS*ILLMLLLLTRLQMP
Trigger: AGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAGATCAAAGGGGACTCGGCATAATTGAATGTCTGTCTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
3UTR TCA 90 bp ATAGTGACACTATATACACACATACACACATACTCACACATGTCATaGGTGAATATTTGCCCTTACCACAGAGGAAGCACTATAATACTT +
Preference number: 1 (lower is better)
Translates to: IVTLYTHIHTYSHMS*VNICPYHRGSTIIL
Trigger: AAGTATTATAGTGCTTCCTCTGTGGTAAGGGCAAATATTCACTCATGACATGTGTGAGTATGTGTGTATGTGTGTATATAGTGTCACTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR GCA 90 bp AATGGAATCATCAGCCTCACTGGATATAGAAGGTACACTTCTATATaGATAAGCTTTGTCATCCTCAGTTTTTATGTCTTCTGTTACAGA +
Preference number: 1 (lower is better)
Translates to: NGIISLTGYRRYTSI*ISFVILSFYVFCYR
Trigger: TCTGTAACAGAAGACATAAAAACTGAGGATGACAAAGCTTATGCATATAGAAGTGTACCTTCTATATCCAGTGAGGCTGATGATTCCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR CCA 90 bp GGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGACCCAAGCTGCTCTGTaGCCTGCAGCGATGTATGCA +
Preference number: 2 (lower is better)
Translates to: GPKPHKGTRLLCGSGFSLTQAAL*PAAMYA
Trigger: TGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGT...CAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR-3UTR CCA 90 bp CCGAGGTGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACAACCCAAGCTGCTCTGTaGCCTGCAGCGATGTATGCA +
Preference number: 2 (lower is better)
Translates to: PRCHLLELEREVPVCFLTTQAAL*PAAMYA
Trigger: TGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGT...TGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCACCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR-3UTR CCA 90 bp CCCCGTGTGTTTCCTGACAGGGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTTTGGTGACCAAACTCTaGAAACCCGATTTACCACTG +
Preference number: 2 (lower is better)
Translates to: PRVFPDRALSRTRGPASSLVTKL*KPDLPL
Trigger: CAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAA...AGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCCCTGTCAGGAAACACACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR-3UTR CCA 90 bp CCGAGGTGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACACCTCCTCTGTGGCAGTaGCTTTTCCTTGTGGGTGAT +
Preference number: 2 (lower is better)
Translates to: PRCHLLELEREVPVCFLTPPLWQ*LFLVGD
Trigger: ATCACCCACAAGGAAAAGCCACTGCCACAGAGGAGG...TGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCACCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR-3UTR GCA 90 bp CCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCCTTCATCTTCCAACCCAAGCTaGTCTGTGGCCTGCAGCGAT +
Preference number: 2 (lower is better)
Translates to: PCHLCQQNSRHSPKDVPSSSNPS*SVACSD
Trigger: ATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGA...TGAAGGGACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR-3UTR TCA 90 bp TGGAGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCGAGGTCATCTGTGACTaGGTCGGGGTTAGGGACCTC +
Preference number: 2 (lower is better)
Translates to: WRPAKWMAPTLRGFVLSLEVICD*VGVRDL
Trigger: GAGGTCCCTAACCCCGACTCAGTCACAGATGACCTC...GAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR CCA 90 bp CCACTTCCTCCTCAATGGACAGAACCTCAGGCAATTCTTCATCACTTGGCGCCTTCCACTGGGGACCGCTaGGATTTCCCCAGGTTCAAG +
Preference number: 2 (lower is better)
Translates to: PLPPQWTEPQAILHHLAPSTGDR*DFPRFK
Trigger: CTTGAACCTGGGGAAATCCCAGCGGTCCCCAGTGGA...AGGCGCCAAGTGATGAAGAATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR CCA 90 bp AGCTGCGAAGTTAGGGGACTTCGTCTGCCAAAGGTGGATGAGAGGTTTCGCCCACATCGGAGATCTTGCTaGAGGCCTGCTAAGTGGATG +
Preference number: 2 (lower is better)
Translates to: SCEVRGLRLPKVDERFRPHRRSC*RPAKWM
Trigger: CATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATG...TGGGCGAAACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR TCA 90 bp CACTTGGCGCCTGCTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCTCCTGGTGTGTATTCTaGACTCAGGATTGGATACTG +
Preference number: 2 (lower is better)
Translates to: HLAPAASQESSEILLEACSWCVF*TQDWIL
Trigger: CAGTATCCAATCCTGAGTTCAGAATACACACCAGGA...GCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR CAA 90 bp GATGGCACAGTGTGGCTTCATCCTGGCCACTGTTGCATTATACTCTaGCTCAGCTGCGAAGTTAGGGGACTTCGTCTGCCAAAGGTGGAT +
Preference number: 2 (lower is better)
Translates to: DGTVWLHPGHCCIIL*LSCEVRGLRLPKVD
Trigger: ATCCACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCTGAGCAAGAGTATAATGCAACAGTGGCCAGGATGAAGCCACACTGTGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR GCA 90 bp CATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTCACTTTGACGATCATTaGGGTAAACTACAGGGGGAA +
Preference number: 2 (lower is better)
Translates to: HRRSCWRPAKWMAPTLRGHFDDH*GKLQGE
Trigger: TTCCCCCTGTAGTTTACCGCAATGATCGTCAAAGTG...ACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR CCA 90 bp CTGTACAAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCTATCGCCCTACCCGCTaGGTACCGAGGTGCCACCTG +
Preference number: 2 (lower is better)
Translates to: LYKGNTDSTRVNLISIHAYRPTR*VPRCHL
Trigger: CAGGTGGCACCTCGGTACCCAGCGGGTAGGGCGATA...GGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTTGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR CAA 90 bp ACACACCATTACTCTCTGCCACTGATGAGCATGACTCAGGTGACTTaGGCCATGAAAGCTCGGATGGGTCTGATTTCTCGGGCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: THHYSLPLMSMTQVT*AMKARMGLISRASH
Trigger: ATGAGAAGCCCGAGAAATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCATCAGTGGCAGAGAGTAATGGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR TCA 90 bp CATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTCCTGAGAGTTTGATATaGTCTGATAAATTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: HRRSCWRPAKWMAPTLRGPESLI*SDKFCS
Trigger: GGAGCAGAATTTATCAGATCATATCAAACTCTCAGG...ACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR TCA 90 bp ATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTCTCAACATCTGTCAGCCCATGAGAAACAGCATCTaGAACAGTGGCGGAGGGGAT +
Preference number: 2 (lower is better)
Translates to: MCDNMSFSNRSVLNICQPMRNSI*NSGGGD
Trigger: ATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCAT...GGGCTGACAGATGTTGAGAACGGACCTGTTGCTGAAGCTCATGTTATCACACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR TCA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTGGAAAGTCCAGGGTCTaGCTCAATCAGGAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: YCRCCILNANDLSSHSMCGKSRV*LNQELR
Trigger: CCTGAGCTCCTGATTGAGTCAGACCCTGGACTTTCC...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR TCA 90 bp TGGAGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCTGTGTTTTCCATCCATaGCAGAACAATGCTCAAGAT +
Preference number: 2 (lower is better)
Translates to: WRPAKWMAPTLRGFVLSLCVFHP*QNNAQD
Trigger: ATCTTGAGCATTGTTCTGTCATGGATGGAAAACACA...GAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR GCA 90 bp AGCTGCGAAGTTAGGGGACTTCGTCTGCCAAAGGTGGATGAGAGGTTTCGCCCAAGGTACACTTCTATATaGATAAGCTTTGTCATCCTC +
Preference number: 2 (lower is better)
Translates to: SCEVRGLRLPKVDERFRPRYTSI*ISFVIL
Trigger: GAGGATGACAAAGCTTATGCATATAGAAGTGTACCT...TGGGCGAAACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR TCA 90 bp ATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTCTCAACATCTGTCAGCCCTGCTCCCATGGAGAATaGGAAACAGCATCTGAAACA +
Preference number: 2 (lower is better)
Translates to: MCDNMSFSNRSVLNICQPCSHGE*ETASET
Trigger: TGTTTCAGATGCTGTTTCTCATTCTCCATGGGAGCA...GGGCTGACAGATGTTGAGAACGGACCTGTTGCTGAAGCTCATGTTATCACACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR TCA 90 bp AATGACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCTGCTCCCATGGAGAATaGGAAACAGCATCTGAAACA +
Preference number: 2 (lower is better)
Translates to: NDLSSHSMCDNMSFSNRSCSHGE*ETASET
Trigger: TGTTTCAGATGCTGTTTCTCATTCTCCATGGGAGCA...GGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR GCA 90 bp GGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACCTGCTGATGATTTCAGATTGCTaGGTCCAATTCATTGGGTGT +
Preference number: 2 (lower is better)
Translates to: GKYINYRPTRWVPRCHLLMISDC*VQFIGC
Trigger: ACACCCAATGAATTGGACGCAGCAATCTGAAATCAT...CAGCAGGTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR-3UTR GCA 90 bp ACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAAAACGCTGGGTACCGAGGTaGCACCTGCTGGAGCTAGAG +
Preference number: 2 (lower is better)
Translates to: TDSTRVNLISIHAICVLKRWVPR*HLLELE
Trigger: CTCTAGCTCCAGCAGGTGGCACCTCGGTACCCAGCG...TTTTAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR-3UTR GCA 90 bp CATCTAGCATCATTTTCTTCATTGCTGCTATCTGGCTTGTGGTACGGCATGAGCAAATTCTGCTCCACCTaGATCCTGCTAGCAGATGAC +
Preference number: 2 (lower is better)
Translates to: HLASFSSLLLSGLWYGMSKFCST*ILLADD
Trigger: GTCATCTGCTAGCAGGATGCAGGTGGAGCAGAATTT...GCTCATGCCGTACCACAAGCCAGATAGCAGCAATGAAGAAAATGATGCTAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR GCA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCGAGACAACCTCAGGATaGATCCAAATCATTAACCTG +
Preference number: 2 (lower is better)
Translates to: GFRLTDIEWILLDSSLWAETTSG*IQIINL
Trigger: CAGGTTAATGATTTGGATGCATCCTGAGGTTGTCTC...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR CCA 90 bp ATAAGGAGACTTGTTCCATCCTCTTCAAGGAAGGCATTGGGTGGAGAATATTCTTATTTCTCTCTCCACTaGGGACCGCTGGGATTTCCC +
Preference number: 2 (lower is better)
Translates to: IRRLVPSSSRKALGGEYSYFSLH*GPLGFP
Trigger: GGGAAATCCCAGCGGTCCCCAGTGGAGAGAGAAATA...AGAATATTCTCCACCCAATGCCTTCCTTGAAGAGGATGGAACAAGTCTCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR CCA 90 bp ATAAGGAGACTTGTTCCATCCTCTTCAAGGAAGGCATTGGGTGGAGAATATTCTGGCCTGCTAAGTGGATaGCGCCAACTCTTAGAGGTT +
Preference number: 2 (lower is better)
Translates to: IRRLVPSSSRKALGGEYSGLLSG*RQLLEV
Trigger: AACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCC...AGAATATTCTCCACCCAATGCCTTCCTTGAAGAGGATGGAACAAGTCTCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR CCA 90 bp GGAAATAAGGAGACTTGTTCCATCCTCTTCAAGGAAGGCATTGGGTGGAGAATATTCGTCTGCCAAAGGTaGATGAGAGGTTTCGCCCAA +
Preference number: 2 (lower is better)
Translates to: GNKETCSILFKEGIGWRIFVCQR*MRGFAQ
Trigger: TTGGGCGAAACCTCTCATCCACCTTTGGCAGACGAA...TATTCTCCACCCAATGCCTTCCTTGAAGAGGATGGAACAAGTCTCCTTATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR TCA 90 bp CTGTTTCTTCCACTTCCTCCTCAATGGACAGAACCTCAGGCAATTCTTCATCACGGAAATATCAACACCTaGGTTAGTTCTGCACCTCAG +
Preference number: 2 (lower is better)
Translates to: LFLPLPPQWTEPQAILHHGNINT*VSSAPQ
Trigger: CTGAGGTGCAGAACTAACTCAGGTGTTGATATTTCC...GTGATGAAGAATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGGAAGAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR TCA 90 bp GGAAATAAGGAGACTTGTTCCATCCTCTTCAAGGAAGGCATTGGGTGGAGAATACTTCACTGCTGCTTCTaGCTTTTCACTGACCTTGAG +
Preference number: 2 (lower is better)
Translates to: GNKETCSILFKEGIGWRILHCCF*LFTDLE
Trigger: CTCAAGGTCAGTGAAAAGTCAGAAGCAGCAGTGAAG...TATTCTCCACCCAATGCCTTCCTTGAAGAGGATGGAACAAGTCTCCTTATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR TCA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTTCCAAATCATTAACCTaGTGCACCTTGGAAAGCTTT +
Preference number: 2 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVSKSLT*CTLESF
Trigger: AAAGCTTTCCAAGGTGCATCAGGTTAATGATTTGGA...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR GCA 90 bp GCGTCCAATTCATTGGGTGTATTTTGTATTTTTGGTGACCAAACTCTGGAAACCACACCCTGTCACCTATaGCAGCAAAACTCACGGCAC +
Preference number: 2 (lower is better)
Translates to: ASNSLGVFCIFGDQTLETTPCHL*QQNSRH
Trigger: GTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGT...GGTTTCCAGAGTTTGGTCACCAAAAATACAAAATACACCCAATGAATTGGACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR-3UTR GCA 90 bp CTGATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTCTACCTCTTATAAGATaGCGAAGTTTGACTCCATGT +
Preference number: 2 (lower is better)
Translates to: LMSMTQVTLAMKARMGLILPLIR*RSLTPC
Trigger: ACATGGAGTCAAACTTCGGCATCTTATAAGAGGTAG...AATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR GCA 90 bp AGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTGATGAGACAACCTCAGGATaGATCCAAATCATTAACCTG +
Preference number: 2 (lower is better)
Translates to: RLTDIEWILLDSSLWACDETTSG*IQIINL
Trigger: CAGGTTAATGATTTGGATGCATCCTGAGGTTGTCTC...ATCACAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR CCA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTCTGACAGACATAGAGTaGATTCTCTTAGATTCAAGC +
Preference number: 2 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVLTDIE*ILLDSS
Trigger: GCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAG...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR TCA 90 bp TGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTGATTCCAATGACAATTTTTaGGGCTGTAGTAGGACACGT +
Preference number: 2 (lower is better)
Translates to: CRCCILNANDLSSHSMCDSNDNF*GCSRTR
Trigger: ACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGA...ATCACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR TCA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCAAATGGTGTAACTTCTaGGACTCCTATTATAATGCC +
Preference number: 2 (lower is better)
Translates to: GFRLTDIEWILLDSSLWAKWCNF*DSYYNA
Trigger: GGCATTATAATAGGAGTCTCAGAAGTTACACCATTT...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR TCA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTAAATGGTGTAACTTCTaGGACTCCTATTATAATGCC +
Preference number: 2 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVKWCNF*DSYYNA
Trigger: GGCATTATAATAGGAGTCTCAGAAGTTACACCATTT...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR TCA 90 bp CACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGATAAGCCTCTGGGCCTGTaGTGTGCTGTAGAAAAATGG +
Preference number: 2 (lower is better)
Translates to: HLNSKYVQLLCCAARRKDKPLGL*CAVEKW
Trigger: CCATTTTTCTACAGCACATCACAGGCCCAGAGGCTT...ATCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR CCA 90 bp ATAAGGAGACTTGTTCCATCCTCTTCAAGGAAGGCATTGGGTGGAGAATATTCTCAATTCTTCATCACTTaGCGCCTGCTGCTTCACAAG +
Preference number: 2 (lower is better)
Translates to: IRRLVPSSSRKALGGEYSQFFIT*RLLLHK
Trigger: CTTGTGAAGCAGCAGGCGCCAAGTGATGAAGAATTG...AGAATATTCTCCACCCAATGCCTTCCTTGAAGAGGATGGAACAAGTCTCCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR TCA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGACTTTCCTAATGAATTaGTGTTTTCACAGTGAGCCT +
Preference number: 2 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLTFLMN*CFHSEP
Trigger: AGGCTCACTGTGAAAACATCAATTCATTAGGAAAGT...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR TCA 90 bp TTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAAATCACATGAGAAACAGCATCTaGAACAGTGGCGGAGGGGAT +
Preference number: 2 (lower is better)
Translates to: LIPMTIFEAVVGHVGLNHMRNSI*NSGGGD
Trigger: ATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCAT...GTGATTTAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR GCA 90 bp ACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAAAATCTTCCAACCCAAGCTaGTCTGTGGCCTGCAGCGAT +
Preference number: 2 (lower is better)
Translates to: TDSTRVNLISIHAICVLKSSNPS*SVACSD
Trigger: ATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGA...TTTTAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR-3UTR CCA 90 bp ATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTTCTATTATTAACAGAGCATaGCCCCAATTTTGGAAAGAT +
Preference number: 2 (lower is better)
Translates to: MSMTQVTLAMKARMGLISIINRA*PQFWKD
Trigger: ATCTTTCCAAAATTGGGGCCATGCTCTGTTAATAAT...AGAAATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR CCA 90 bp TGGAATGGAATCATCAGCCTCACTGGATATAGAAGGTACACTTCTATATGCATAGTAGACCTAGCACACTaGAAGCTGGAAACCAAGTCA +
Preference number: 2 (lower is better)
Translates to: WNGIISLTGYRRYTSICIVDLAH*KLETKS
Trigger: TGACTTGGTTTCCAGCTTCCAGTGTGCTAGGTCTAC...TATGCATATAGAAGTGTACCTTCTATATCCAGTGAGGCTGATGATTCCATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR CAA 90 bp TCAGGATGCATCCAAATCATTAACCTGATGCACCTTGGAAAGCTTTaGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGA +
Preference number: 2 (lower is better)
Translates to: SGCIQIINLMHLGKL*IPMTIFEAVVGHVG
Trigger: TCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTTTCCAAGGTGCATCAGGTTAATGATTTGGATGCATCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR CAA 90 bp CATGCAAATGGCATCTTTAATTCACCATATTGTAGGTGTTGCATCTaGAATGCCAATGACCTCTCTTCCCACAGCATGTGTGATAACATG +
Preference number: 2 (lower is better)
Translates to: HANGIFNSPYCRCCI*NANDLSSHSMCDNM
Trigger: CATGTTATCACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCCATTTGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR TCA 90 bp GGCATCTTTAATTCACCATATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCCAATGACAATTTTTaGGGCTGTAGTAGGACACGT +
Preference number: 2 (lower is better)
Translates to: GIFNSPYCRCCILNANDLSNDNF*GCSRTR
Trigger: ACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGA...GAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR GCA 90 bp CTGTACAAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATGATTTCAGATTGCTaGGTCCAATTCATTGGGTGT +
Preference number: 2 (lower is better)
Translates to: LYKGNTDSTRVNLISIHAMISDC*VQFIGC
Trigger: ACACCCAATGAATTGGACGCAGCAATCTGAAATCAT...GGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTTGTACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR CAA 90 bp AGCACACTGGAAGCTGGAAACCAAGTCATACACCTAATGAAAATATaGTGTTTTCCATCCATGACAGAACAATGCTCAAGATGTTCTCCT +
Preference number: 2 (lower is better)
Translates to: STLEAGNQVIHLMKI*CFPSMTEQCSRCSP
Trigger: AGGAGAACATCTTGAGCATTGTTCTGTCATGGATGGAAAACACAATATTTTCATTAGGTGTATGACTTGGTTTCCAGCTTCCAGTGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR TCA 90 bp GGCATCTTTAATTCACCATATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCCAAATCATTAACCTaGTGCACCTTGGAAAGCTTT +
Preference number: 2 (lower is better)
Translates to: GIFNSPYCRCCILNANDLSKSLT*CTLESF
Trigger: AAAGCTTTCCAAGGTGCATCAGGTTAATGATTTGGA...GAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR CCA 90 bp TCACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGACTGACAGACATAGAGTaGATTCTCTTAGATTCAAGC +
Preference number: 2 (lower is better)
Translates to: SPKLKIRSVALLCSKKEGLTDIE*ILLDSS
Trigger: GCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAG...TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR TCA 90 bp AAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGCTTTTCCTTGTGGGTaGTTCACTAGTATTTCCTTT +
Preference number: 2 (lower is better)
Translates to: KGNTDSTRVNLISIHAICAFPCG*FTSISF
Trigger: AAAGGAAATACTAGTGAATCACCCACAAGGAAAAGC...ACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR-3UTR TCA 90 bp TTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAAATCACACTTTCCTAATGAATTaGTGTTTTCACAGTGAGCCT +
Preference number: 2 (lower is better)
Translates to: LIPMTIFEAVVGHVGLNHTFLMN*CFHSEP
Trigger: AGGCTCACTGTGAAAACATCAATTCATTAGGAAAGT...GTGATTTAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR GCA 90 bp ACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAAAAGAGATGATTTCAGATTaGTGCGTCCAATTCATTGGG +
Preference number: 2 (lower is better)
Translates to: TDSTRVNLISIHAICVLKEMISD*CVQFIG
Trigger: CCCAATGAATTGGACGCAGCAATCTGAAATCATCTC...TTTTAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR-3UTR GCA 90 bp AAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTATCATAGAAGACAACTaGTCACAAGTGAAAGCAAGA +
Preference number: 2 (lower is better)
Translates to: KGNTDSTRVNLISIHAICIIEDN*SQVKAR
Trigger: TCTTGCTTTCACTTGTGAGCAGTTGTCTTCTATGAT...ACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR-3UTR TCA 90 bp ACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAAAATTTGAAACAAATAAGTaGGAGTCCTTCCCTGACTGT +
Preference number: 2 (lower is better)
Translates to: TDSTRVNLISIHAICVLKFETNK*ESFPDC
Trigger: ACAGTCAGGGAAGGACTCTCACTTATTTGTTTCAAA...TTTTAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR-3UTR CCA 90 bp AATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTACTTAGAAAACTTCTTTaGGATCATAGAAGACAACTG +
Preference number: 2 (lower is better)
Translates to: NTDSTRVNLISIHAICVLLRKLL*DHRRQL
Trigger: CAGTTGTCTTCTATGATCCCAAAGAAGTTTTCTAAG...TAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR GCA 72 bp TGGCGCCTGCTGCTTCACAAGAGTCATCGGAGATCTTaGTGGAGGCCTGCTAAGTGGATGGCGCCAACTCTT +
Preference number: 3 (lower is better)
Translates to: WRLLLHKSHRRS*WRPAKWMAPTL
Trigger: AAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAGCAGGCGCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR GCA 72 bp CGATTTACCACTGTCAGAGACACACCCTGTCACCTATaGCAGCAAAACTCACGGCACAGCCCCAAGGATGTC +
Preference number: 3 (lower is better)
Translates to: RFTTVRDTPCHL*QQNSRHSPKDV
Trigger: GACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR GCA 72 bp AGAACCTCAGGCAATTCTTCATCACTTGGCGCCTGCTaGTTCACAAGAGTCATCGGAGATCTTGCTGGAGGC +
Preference number: 3 (lower is better)
Translates to: RTSGNSSSLGAC*FTRVIGDLAGG
Trigger: GCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTGATGAAGAATTGCCTGAGGTTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR GCA 72 bp TACTCTTGCTCAGCTGCGAAGTTAGGGGACTTCGTCTaGCAAAGGTGGATGAGAGGTTTCGCCCAAGACTCT +
Preference number: 3 (lower is better)
Translates to: YSCSAAKLGDFV*QRWMRGFAQDS
Trigger: AGAGTCTTGGGCGAAACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCTGAGCAAGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR CCA 72 bp GTCATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATaGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCT +
Preference number: 3 (lower is better)
Translates to: VIGDLAGGLLSG*RQLLEVLFSPS
Trigger: AGAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR CCA 72 bp TCAGCTGCGAAGTTAGGGGACTTCGTCTGCCAAAGGTaGATGAGAGGTTTCGCCCAAGACTCTGTTTCTTCC +
Preference number: 3 (lower is better)
Translates to: SAAKLGDFVCQR*MRGFAQDSVSS
Trigger: GGAAGAAACAGAGTCTTGGGCGAAACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR CCA 72 bp GTGGTACGGCATGAGCAGAGTGCAGATGGCACAGTGTaGCTTCATCCTGGCCACTGTTGCATTATACTCTTG +
Preference number: 3 (lower is better)
Translates to: VVRHEQSADGTV*LHPGHCCIILL
Trigger: CAAGAGTATAATGCAACAGTGGCCAGGATGAAGCCACACTGTGCCATCTGCACTCTGCTCATGCCGTACCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR GCA 72 bp GACAGAACCTCAGGCAATTCTTCATCACTTGGCGCCTaGTGCTTCACAAGAGTCATCGGAGATCTTGCTGGA +
Preference number: 3 (lower is better)
Translates to: DRTSGNSSSLGA*CFTRVIGDLAG
Trigger: TCCAGCAAGATCTCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTGATGAAGAATTGCCTGAGGTTCTGTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR GCA 72 bp CATCCTGGCCACTGTTGCATTATACTCTTGCTCAGCTaGGAAGTTAGGGGACTTCGTCTGCCAAAGGTGGAT +
Preference number: 3 (lower is better)
Translates to: HPGHCCIILLLS*EVRGLRLPKVD
Trigger: ATCCACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCTGAGCAAGAGTATAATGCAACAGTGGCCAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR GCA 72 bp TGTGGCTTCATCCTGGCCACTGTTGCATTATACTCTTaGTCAGCTGCGAAGTTAGGGGACTTCGTCTGCCAA +
Preference number: 3 (lower is better)
Translates to: CGFILATVALYS*SAAKLGDFVCQ
Trigger: TTGGCAGACGAAGTCCCCTAACTTCGCAGCTGAGCAAGAGTATAATGCAACAGTGGCCAGGATGAAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR CCA 72 bp AAGAGTCATCGGAGATCTTGCTGGAGGCCTGCTAAGTaGATGGCGCCAACTCTTAGAGGTTTTGTTCTCTCC +
Preference number: 3 (lower is better)
Translates to: KSHRRSCWRPAK*MAPTLRGFVLS
Trigger: GGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR CAA 90 bp AGCTGCGAAGTTAGGGGACTTCGTCTGCCAAAGGTGGATGAGAGGTTTCGCCCACAACTCTTAGAGGTTTaGTTCTCTCCCTCTGCTATA +
Preference number: 3 (lower is better)
Translates to: SCEVRGLRLPKVDERFRPQLLEV*FSPSAI
Trigger: TATAGCAGAGGGAGAGAACAAAACCTCTAAGAGTTG...TGGGCGAAACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR TCA 72 bp TGCTGGCTGCTCCCATGGAGAATGAGAAACAGCATCTaGAACAGTGGCGGAGGGGATGTAACTTTCCTAATG +
Preference number: 3 (lower is better)
Translates to: CWLLPWRMRNSI*NSGGGDVTFLM
Trigger: CATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATTCTCCATGGGAGCAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR TCA 72 bp CCAATGACCTCTCTTCCCACAGCATGTGTGATAACATaGGCTTCAGCAACAGGTCCGTTCTCAACATCTGTC +
Preference number: 3 (lower is better)
Translates to: PMTSLPTACVIT*ASATGPFSTSV
Trigger: GACAGATGTTGAGAACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTCATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR CAA 90 bp TTCTGCTCCACCTGCATCCTGCTAGCAGATGACTCTTCTTCTGAAGATGCTTCTATTCTGAACTCAGGATaGGATACTGCCTCCTTCCAG +
Preference number: 3 (lower is better)
Translates to: FCSTCILLADDSSSEDASILNSG*DTASFQ
Trigger: CTGGAAGGAGGCAGTATCCAATCCTGAGTTCAGAAT...AGAAGCATCTTCAGAAGAAGAGTCATCTGCTAGCAGGATGCAGGTGGAGCAGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR CAA 90 bp GGAAATAAGGAGACTTGTTCCATCCTCTTCAAGGAAGGCATTGGGTGGAGAATAGCAATTCTTCATCACTaGGCGCCTGCTGCTTCACAA +
Preference number: 3 (lower is better)
Translates to: GNKETCSILFKEGIGWRIAILHH*APAASQ
Trigger: TTGTGAAGCAGCAGGCGCCAAGTGATGAAGAATTGC...TATTCTCCACCCAATGCCTTCCTTGAAGAGGATGGAACAAGTCTCCTTATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR CAA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTTCAAAATACGTTCAGTaGCTTTGTTGTGCAGCAAGA +
Preference number: 3 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVSKYVQ*LCCAAR
Trigger: TCTTGCTGCACAACAAAGCAACTGAACGTATTTTGA...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR GCA 72 bp GATCCATTTACTTGCATGAACCCGTACGCAGCACTTTaGACAGGAAATAAGGAGACTTGTTCCATCCTCTTC +
Preference number: 3 (lower is better)
Translates to: DPFTCMNPYAAL*TGNKETCSILF
Trigger: GAAGAGGATGGAACAAGTCTCCTTATTTCCTGTGCAAAGTGCTGCGTACGGGTTCATGCAAGTAAATGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR CCA 72 bp GCTCCCATGGAGAATGAGAAACAGCATCTGAAACAGTaGCGGAGGGGATGTAACTTTCCTAATGAATTGATG +
Preference number: 3 (lower is better)
Translates to: APMENEKQHLKQ*RRGCNFPNELM
Trigger: CATCAATTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATTCTCCATGGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR CAA 90 bp AATGACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCTCAAAATACGTTCAGTaGCTTTGTTGTGCAGCAAGA +
Preference number: 3 (lower is better)
Translates to: NDLSSHSMCDNMSFSNRSSKYVQ*LCCAAR
Trigger: TCTTGCTGCACAACAAAGCAACTGAACGTATTTTGA...GGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR GCA 72 bp TATAATGCCTCCATGCTACAGGAGACAACCTCAGGATaGATCCAAATCATTAACCTGATGCACCTTGGAAAG +
Preference number: 3 (lower is better)
Translates to: YNASMLQETTSG*IQIINLMHLGK
Trigger: CTTTCCAAGGTGCATCAGGTTAATGATTTGGATGCATCCTGAGGTTGTCTCCTGTAGCATGGAGGCATTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR GCA 72 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATaGTACAGGAGACAACCTCAGGATGCATCCAAATCA +
Preference number: 3 (lower is better)
Translates to: GVTSETPIIMPP*YRRQPQDASKS
Trigger: TGATTTGGATGCATCCTGAGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR CAA 90 bp CTGTTTCTTCCACTTCCTCCTCAATGGACAGAACCTCAGGCAATTCTTCATCACCTACTAACAAACACTTaGACGATCATTGCGGTAAAC +
Preference number: 3 (lower is better)
Translates to: LFLPLPPQWTEPQAILHHLLTNT*TIIAVN
Trigger: GTTTACCGCAATGATCGTCAAAGTGTTTGTTAGTAG...GTGATGAAGAATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGGAAGAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR CAA 90 bp TTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAAATCACCAGGAGCTCAGGCTATaGTATCCCCATCCTAAACAC +
Preference number: 3 (lower is better)
Translates to: LIPMTIFEAVVGHVGLNHQELRL*YPHPKH
Trigger: GTGTTTAGGATGGGGATACAATAGCCTGAGCTCCTG...GTGATTTAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR CAA 90 bp GGCATCTTTAATTCACCATATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCCGTTCAGTTGCTTTGTaGTGCAGCAAGAAGGAAGGA +
Preference number: 3 (lower is better)
Translates to: GIFNSPYCRCCILNANDLRSVAL*CSKKEG
Trigger: TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACG...GAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR TCA 72 bp GCATCTTTAATTCACCATATTGTAGGTGTTGCATCTTaGATGCCAATGACCTCTCTTCCCACAGCATGTGTG +
Preference number: 3 (lower is better)
Translates to: ASLIHHIVGVAS*MPMTSLPTACV
Trigger: CACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR GCA 72 bp GCAAATGGCATCTTTAATTCACCATATTGTAGGTGTTaGATCTTGAATGCCAATGACCTCTCTTCCCACAGC +
Preference number: 3 (lower is better)
Translates to: ANGIFNSPYCRC*ILNANDLSSHS
Trigger: GCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCCATTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR-3UTR CAA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAACACAGTGAGCCTTCATaGTTATTGTTGTTGTTGTTA +
Preference number: 3 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNEHSEPS*LLLLLL
Trigger: TAACAACAACAACAATAACAATGAAGGCTCACTGTG...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR TCA 72 bp CTATATACACACATACACACATACTCACACATGTCATaGGTGAATATTTGCCCTTACCACAGAGGAAGCACT +
Preference number: 3 (lower is better)
Translates to: LYTHIHTYSHMS*VNICPYHRGST
Trigger: AGTGCTTCCTCTGTGGTAAGGGCAAATATTCACTCATGACATGTGTGAGTATGTGTGTATGTGTGTATATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR CAA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTACACAGTGAGCCTTCATaGTTATTGTTGTTGTTGTTA +
Preference number: 3 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLHSEPS*LLLLLL
Trigger: TAACAACAACAACAATAACAATGAAGGCTCACTGTG...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
3UTR GCA 72 bp ATGAAAATATTGTGTTTTCCATCCATGACAGAACAATaGTCAAGATGTTCTCCTGGTGTGTATTCTGAACTC +
Preference number: 3 (lower is better)
Translates to: MKILCFPSMTEQ*SRCSPGVYSEL
Trigger: GAGTTCAGAATACACACCAGGAGAACATCTTGAGCATTGTTCTGTCATGGATGGAAAACACAATATTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR GCA 72 bp ATCAGCCTCACTGGATATAGAAGGTACACTTCTATATaGATAAGCTTTGTCATCCTCAGTTTTTATGTCTTC +
Preference number: 3 (lower is better)
Translates to: ISLTGYRRYTSI*ISFVILSFYVF
Trigger: GAAGACATAAAAACTGAGGATGACAAAGCTTATGCATATAGAAGTGTACCTTCTATATCCAGTGAGGCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438023.5
3UTR-3UTR CAA 90 bp ACTGCTTCTGCTTTAAGGTGTCAGTATGATGCATCATATTTCCTGTTTTCCAAATTATCTAGCTTCAGTTaGAAAAATACCAGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: TASALRCQYDASYFLFSKLSSFS*KNTSSR
Trigger: TCTGCTGCTGGTATTTTTCAAACTGAAGCTAGATAA...TTTGGAAAACAGGAAATATGATGCATCATACTGACACCTTAAAGCAGAAGCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401787.7
3UTR TCA 72 bp TTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTaGTGGTATCTTTGTTTGCTCCTGGTGTTTTACACA +
Preference number: 3 (lower is better)
Translates to: LMLLLLTRLQMP*WYLCLLLVFYT
Trigger: TGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp GACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCGTCGAGGGGGTGGGTaGGAGGCAGCGGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: DTPCHLCQQNSRHSPKDVRRGGG*EAAAKA
Trigger: CGCCTTCGCCGCTGCCTCCCACCCACCCCCTCGACG...GACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CCA 90 bp GACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCTCCCGTCGAGGGGGTaGGTGGGAGGCAGCGGCGAA +
Preference number: 4 (lower is better)
Translates to: DTPCHLCQQNSRHSPKDVLPSRG*VGGSGE
Trigger: TTCGCCGCTGCCTCCCACCCACCCCCTCGACGGGAG...GACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CCA 90 bp CCCCGTGTGTTTCCTGACAGGGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTTCCACTGGGGACCGCTaGGATTTCCCCAGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: PRVFPDRALSRTRGPASSSTGDR*DFPRFK
Trigger: CTTGAACCTGGGGAAATCCCAGCGGTCCCCAGTGGA...AGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCCCTGTCAGGAAACACACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp GACTTTTCACTGACCTTGAGGTCATCTGTGACTGAGTCGGGGTTAGGGACCTCTGCGCGCGCCGTCACGTaGCCGCTGGGGCCCGCACTT +
Preference number: 4 (lower is better)
Translates to: DFSLTLRSSVTESGLGTSARAVT*PLGPAL
Trigger: AAGTGCGGGCCCCAGCGGTCACGTGACGGCGCGCGC...AGAGGTCCCTAACCCCGACTCAGTCACAGATGACCTCAAGGTCAGTGAAAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp GGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGGTCCTGACTGCCCTGTaGCCATCTGCTGAATTGGTG +
Preference number: 4 (lower is better)
Translates to: GPKPHKGTRLLCGSGFSLVLTAL*PSAELV
Trigger: CACCAATTCAGCAGATGGTCACAGGGCAGTCAGGAC...CAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR GCA 90 bp CCCCGTGTGTTTCCTGACAGGGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTTACTTCAGGGGTGGATaGTGGAGTAGGCTTCGTGTG +
Preference number: 4 (lower is better)
Translates to: PRVFPDRALSRTRGPASSYFRGG*WSRLRV
Trigger: CACACGAAGCCTACTCCAGCATCCACCCCTGAAGTA...AGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCCCTGTCAGGAAACACACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGCGTAGGAACACTGGATaGAGGCTCCAGAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: GPKPHKGTRLLCGSGFSLRRNTG*RLQRPS
Trigger: AGAGGGTCTCTGGAGCCTGCATCCAGTGTTCCTACG...CAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTCTTCCAACCCAAGCTaGTCTGTGGCCTGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: GPKPHKGTRLLCGSGFSLSSNPS*SVACSD
Trigger: ATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGA...CAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp CCCCGTGTGTTTCCTGACAGGGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTCCTCCATGGAGGGTCTaGAGGTCATTATCTTACAGC +
Preference number: 4 (lower is better)
Translates to: PRVFPDRALSRTRGPASSPPWRV*RSLSYS
Trigger: GCTGTAAGATAATGACCTTCAGACCCTCCATGGAGG...AGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCCCTGTCAGGAAACACACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR TCA 90 bp CCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCCTTCATCCCCGTGTGTTTCCTaGCAGGGCCCTAAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: PCHLCQQNSRHSPKDVPSSPCVS*QGPKPH
Trigger: GTGCGGCTTAGGGCCCTGTCAGGAAACACACGGGGA...TGAAGGGACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGACACCCTGTCACCTATaGCAGCAAAACTCACGGCAC +
Preference number: 4 (lower is better)
Translates to: GPKPHKGTRLLCGSGFSLTPCHL*QQNSRH
Trigger: GTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGT...CAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCCTTCACGCTGGGTACCGAGGTaGCACCTGCTGGAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: PCHLCQQNSRHSPKDVPSRWVPR*HLLELE
Trigger: CTCTAGCTCCAGCAGGTGGCACCTCGGTACCCAGCG...TGAAGGGACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTAGGTGCACAGAACCTTaGCCGGAAGCGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HRRSCWRPAKWMAPTLRGRCTEP*PEALAG
Trigger: CCCAGCCAGCGCTTCCGGGCAAGGTTCTGTGCACCT...ACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp ATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTTCTCCCGGAAGCGCTGGCTaGGGTCCCGCAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: MSMTQVTLAMKARMGLISPGSAG*GPAGLD
Trigger: GTCCAGCCCTGCGGGACCCCAGCCAGCGCTTCCGGG...AGAAATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp TTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCGTCTGGCGCGCGGGTTaGGGCGAGAGCACGACTCGG +
Preference number: 4 (lower is better)
Translates to: LVTKLWKPDLPLSETHPVVWRAG*GESTTR
Trigger: CCGAGTCGTGCTCTCGCCCCAACCCGCGCGCCAGAC...GACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CCA 90 bp TGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACAGGGCCCTGGAGGCCTGCTAAGTaGATGGCGCCAACTCTTAGA +
Preference number: 4 (lower is better)
Translates to: CHLLELEREVPVCFLTGPWRPAK*MAPTLR
Trigger: TCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCA...GGGCCCTGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp GGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTTCGTCTGCCAAAGGTaGATGAGAGGTTTCGCCCAA +
Preference number: 4 (lower is better)
Translates to: GPKPHKGTRLLCGSGFSLFVCQR*MRGFAQ
Trigger: TTGGGCGAAACCTCTCATCCACCTTTGGCAGACGAA...CAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp TGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACAGGGCCCAGTGAATCGAACTTCTaGGACCGCAACGGCGCACAT +
Preference number: 4 (lower is better)
Translates to: CHLLELEREVPVCFLTGPSESNF*DRNGAH
Trigger: ATGTGCGCCGTTGCGGTCCCAGAAGTTCGATTCACT...GGGCCCTGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp GACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCTGGGCACAAGTGACATaGAAGGAGGCCGGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: DTPCHLCQQNSRHSPKDVWAQVT*KEAGQR
Trigger: TCGCTGCCCGGCCTCCTTCCATGTCACTTGTGCCCA...GACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp GACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCGGGTCTGCCCAGGCATaGTGGCTCCCACTTGTACCA +
Preference number: 4 (lower is better)
Translates to: DTPCHLCQQNSRHSPKDVGSAQA*WLPLVP
Trigger: TGGTACAAGTGGGAGCCACCATGCCTGGGCAGACCC...GACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428870.6
CDS-3UTR TCA 90 bp CACTTGGCGCCTGCTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCCTGAGTGAACAGTCCTaGCTGCCCTGTGACCATCTG +
Preference number: 4 (lower is better)
Translates to: HLAPAASQESSEILLEACLSEQS*LPCDHL
Trigger: CAGATGGTCACAGGGCAGTCAGGACTGTTCACTCAG...GCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp CCGAGGTGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACAGGCCTGCTAAGTGGATaGCGCCAACTCTTAGAGGTT +
Preference number: 4 (lower is better)
Translates to: PRCHLLELEREVPVCFLTGLLSG*RQLLEV
Trigger: AACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCC...TGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCACCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CCGAGGTGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACACATCGGAGATCTTGCTaGAGGCCTGCTAAGTGGATG +
Preference number: 4 (lower is better)
Translates to: PRCHLLELEREVPVCFLTHRRSC*RPAKWM
Trigger: CATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATG...TGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCACCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTGGGTGATTCACGCAGATGGCACAGTGTaGCTTCATCCTGGCCACTGT +
Preference number: 4 (lower is better)
Translates to: HKGTRLLCGSGFSLWVIHADGTV*LHPGHC
Trigger: ACAGTGGCCAGGATGAAGCCACACTGTGCCATCTGC...GTGAATCACCCACAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CACTTGGCGCCTGCTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCGCAGATGGCACAGTGTaGCTTCATCCTGGCCACTGT +
Preference number: 4 (lower is better)
Translates to: HLAPAASQESSEILLEACADGTV*LHPGHC
Trigger: ACAGTGGCCAGGATGAAGCCACACTGTGCCATCTGC...GCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp TGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACAGGGCCCACGGCGCACATGACATaGGCCCACTTATTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: CHLLELEREVPVCFLTGPTAHMT*AHLLFF
Trigger: GAAGAACAATAAGTGGGCCCATGTCATGTGCGCCGT...GGGCCCTGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCCTTCATTCTCCCTCAGCAGGTaGGCCCAGCTTCAGACAGTC +
Preference number: 4 (lower is better)
Translates to: PCHLCQQNSRHSPKDVPSFSLSR*AQLQTV
Trigger: GACTGTCTGAAGCTGGGCCCACCTGCTGAGGGAGAA...TGAAGGGACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CTGATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTCGCCACACGTCCTCCTaGGCGCCGACGCGCACCTAT +
Preference number: 4 (lower is better)
Translates to: LMSMTQVTLAMKARMGLIRHTSS*APTRTY
Trigger: ATAGGTGCGCGTCGGCGCCCAGGAGGACGTGTGGCG...AATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp CTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCCCTCGGCCACCTCCATaGTGGTTAGGGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LWKPDLPLSETHPVTYASPRPPP*WLGQCL
Trigger: CAGACACTGCCCTAACCATCATGGAGGTGGCCGAGG...GCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR TCA 90 bp CCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCCTTCATGTTGGCCAGCTGCCTaGACTCCTTCACAGTCATCG +
Preference number: 4 (lower is better)
Translates to: PCHLCQQNSRHSPKDVPSCWPAA*TPSQSS
Trigger: CGATGACTGTGAAGGAGTTCAGGCAGCTGGCCAACA...TGAAGGGACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR TCA 90 bp AGCTGCGAAGTTAGGGGACTTCGTCTGCCAAAGGTGGATGAGAGGTTTCGCCCAGAGGTCATCTGTGACTaGGTCGGGGTTAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: SCEVRGLRLPKVDERFRPEVICD*VGVRDL
Trigger: GAGGTCCCTAACCCCGACTCAGTCACAGATGACCTC...TGGGCGAAACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp CACTTGGCGCCTGCTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCTCTGCCAAAGGTGGATaGGAGGTTTCGCCCAAGACT +
Preference number: 4 (lower is better)
Translates to: HLAPAASQESSEILLEACSAKGG*EVSPKT
Trigger: AGTCTTGGGCGAAACCTCTCATCCACCTTTGGCAGA...GCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp CACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTGGGTGATTCACTTTGACCCACGGAAATaGCCTTCTCGCAAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: HKGTRLLCGSGFSLWVIHFDPRK*PSRKPW
Trigger: CCAAGGCTTGCGAGAAGGTCATTTCCGTGGGTCAAA...GTGAATCACCCACAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp GGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACCTGCTGTCCCCGTGTGTTTCCTaGCAGGGCCCTAAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: GKYINYRPTRWVPRCHLLSPCVS*QGPKPH
Trigger: GTGCGGCTTAGGGCCCTGTCAGGAAACACACGGGGA...CAGCAGGTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GACTGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACGTGACAGCTGTTCGCTaGGCACGCGCACAGGACCCC +
Preference number: 4 (lower is better)
Translates to: DCGKYINYRPTRWVPRCHVTAVR*ARAQDP
Trigger: GGGGTCCTGTGCGCGTGCGCAGCGAACAGCTGTCAC...GTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR GCA 90 bp TGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACAGGGCCCAAATTCTGCTCCACCTaGATCCTGCTAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: CHLLELEREVPVCFLTGPKFCST*ILLADD
Trigger: GTCATCTGCTAGCAGGATGCAGGTGGAGCAGAATTT...GGGCCCTGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGGTCCTCTCTCTTCATTaGTATCTGGGATCCATCTTC +
Preference number: 4 (lower is better)
Translates to: GPKPHKGTRLLCGSGFSLVLSLH*YLGSIF
Trigger: GAAGATGGATCCCAGATAGCAATGAAGAGAGAGGAC...CAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CCGAGGTGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACAGCCTGCAGCGATGTATaGAGACTACTGTCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PRCHLLELEREVPVCFLTACSDV*RLLSLL
Trigger: CAGAAGAGACAGTAGTCTGCATACATCGCTGCAGGC...TGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCACCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTGGGTGATTCACAGCTGCTCTGTGGCCTaGAGCGATGTATGCAGACTA +
Preference number: 4 (lower is better)
Translates to: HKGTRLLCGSGFSLWVIHSCSVA*SDVCRL
Trigger: TAGTCTGCATACATCGCTGCAGGCCACAGAGCAGCT...GTGAATCACCCACAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTGGGTGATTCACACACCCTGTCACCTATaGCAGCAAAACTCACGGCAC +
Preference number: 4 (lower is better)
Translates to: HKGTRLLCGSGFSLWVIHTPCHL*QQNSRH
Trigger: GTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGT...GTGAATCACCCACAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CATTGCGGTAAACTACAGGGGGAAATATCAACACCTGAGTTAGTTCTGCACCTCCTCCCGTCGAGGGGGTaGGTGGGAGGCAGCGGCGAA +
Preference number: 4 (lower is better)
Translates to: HCGKLQGEISTPELVLHLLPSRG*VGGSGE
Trigger: TTCGCCGCTGCCTCCCACCCACCCCCTCGACGGGAG...GAGGTGCAGAACTAACTCAGGTGTTGATATTTCCCCCTGTAGTTTACCGCAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp AGCTGCGAAGTTAGGGGACTTCGTCTGCCAAAGGTGGATGAGAGGTTTCGCCCAAGGAAGAGAAGACAGTaGCCTCCGGCCCAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SCEVRGLRLPKVDERFRPRKRRQ*PPAQGD
Trigger: ATCTCCCTGGGCCGGAGGCCACTGTCTTCTCTTCCT...TGGGCGAAACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp CATCTAGCATCATTTTCTTCATTGCTGCTATCTGGCTTGTGGTACGGCATGAGCGTCTGGCGCGCGGGTTaGGGCGAGAGCACGACTCGG +
Preference number: 4 (lower is better)
Translates to: HLASFSSLLLSGLWYGMSVWRAG*GESTTR
Trigger: CCGAGTCGTGCTCTCGCCCCAACCCGCGCGCCAGAC...GCTCATGCCGTACCACAAGCCAGATAGCAGCAATGAAGAAAATGATGCTAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp CACTTGGCGCCTGCTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCTTCAGGGGTGGATGCTaGAGTAGGCTTCGTGTGATC +
Preference number: 4 (lower is better)
Translates to: HLAPAASQESSEILLEACFRGGC*SRLRVI
Trigger: GATCACACGAAGCCTACTCCAGCATCCACCCCTGAA...GCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp CATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTCCACTGGGGACCGCTaGGATTTCCCCAGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: HRRSCWRPAKWMAPTLRGSTGDR*DFPRFK
Trigger: CTTGAACCTGGGGAAATCCCAGCGGTCCCCAGTGGA...ACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp CACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTGGGTGATTCACAGTGAATCGAACTTCTaGGACCGCAACGGCGCACAT +
Preference number: 4 (lower is better)
Translates to: HKGTRLLCGSGFSLWVIHSESNF*DRNGAH
Trigger: ATGTGCGCCGTTGCGGTCCCAGAAGTTCGATTCACT...GTGAATCACCCACAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCCTTCATCGGGCCACTTGACTTaGACGACTTCTCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PCHLCQQNSRHSPKDVPSSGHLT*TTSPSA
Trigger: TGCTGAGGGAGAAGTCGTCCAAGTCAAGTGGCCCGA...TGAAGGGACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCCTTCAACCCAAGCTGCTCTGTaGCCTGCAGCGATGTATGCA +
Preference number: 4 (lower is better)
Translates to: PCHLCQQNSRHSPKDVPSTQAAL*PAAMYA
Trigger: TGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGT...TGAAGGGACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp GGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTTGGTGACCAAACTCTaGAAACCCGATTTACCACTG +
Preference number: 4 (lower is better)
Translates to: GPKPHKGTRLLCGSGFSLLVTKL*KPDLPL
Trigger: CAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAA...CAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp GGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACCTGCTGTATCGCCCTACCCGCTaGGTACCGAGGTGCCACCTG +
Preference number: 4 (lower is better)
Translates to: GKYINYRPTRWVPRCHLLYRPTR*VPRCHL
Trigger: CAGGTGGCACCTCGGTACCCAGCGGGTAGGGCGATA...CAGCAGGTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp TTCTGCTCCACCTGCATCCTGCTAGCAGATGACTCTTCTTCTGAAGATGCTTCTCCGCAGGGCTGGACCTaGTGTAGTCCACGCGCCACA +
Preference number: 4 (lower is better)
Translates to: FCSTCILLADDSSSEDASPQGWT*CSPRAT
Trigger: TGTGGCGCGTGGACTACATCAGGTCCAGCCCTGCGG...AGAAGCATCTTCAGAAGAAGAGTCATCTGCTAGCAGGATGCAGGTGGAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp TCATCTTCTCTCTTCCAACCCAAGCTGCTCTGTGGCCTGCAGCGATGTATGCAGGAGGTCATCTGTGACTaGGTCGGGGTTAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: SSSLFQPKLLCGLQRCMQEVICD*VGVRDL
Trigger: GAGGTCCCTAACCCCGACTCAGTCACAGATGACCTC...CTGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGAGAGAAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp TACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCGCAACGGCGCACATaGCATGGGCCCACTTATTGT +
Preference number: 4 (lower is better)
Translates to: YHCQRHTLSPMPAKLTAQPQRRT*HGPTYC
Trigger: ACAATAAGTGGGCCCATGTCATGTGCGCCGTTGCGG...CTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp CAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATTTGACCCACGGAAATaGCCTTCTCGCAAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: QRHTLSPMPAKLTAQPQGFDPRK*PSRKPW
Trigger: CCAAGGCTTGCGAGAAGGTCATTTCCGTGGGTCAAA...TCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp CTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCTGCCATCGGGCCACTTaGCTTGGACGACTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LWKPDLPLSETHPVTYASCHRAT*LGRLLP
Trigger: AGGGAGAAGTCGTCCAAGTCAAGTGGCCCGATGGCA...GCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp CCCCGTGTGTTTCCTGACAGGGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTTTTGAAACAAATAAGTaGGAGTCCTTCCCTGACTGT +
Preference number: 4 (lower is better)
Translates to: PRVFPDRALSRTRGPASSFETNK*ESFPDC
Trigger: ACAGTCAGGGAAGGACTCTCACTTATTTGTTTCAAA...AGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCCCTGTCAGGAAACACACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATCACTTGGCGCCTGCTaGTTCACAAGAGTCATCGGA +
Preference number: 4 (lower is better)
Translates to: QRHTLSPMPAKLTAQPQGSLGAC*FTRVIG
Trigger: TCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTGA...TCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCTCACTTGGCGCCTGCTaGTTCACAAGAGTCATCGGA +
Preference number: 4 (lower is better)
Translates to: DTPCHLCQQNSRHSPKDVSLGAC*FTRVIG
Trigger: TCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTGA...GACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTGGGTGATTCACTTAGGGGACTTCGTCTaGCAAAGGTGGATGAGAGGT +
Preference number: 4 (lower is better)
Translates to: HKGTRLLCGSGFSLWVIHLGDFV*QRWMRG
Trigger: ACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAA...GTGAATCACCCACAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGCCCTTGGATAATGTCTaGTCCATAAAACGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GPKPHKGTRLLCGSGFSLPLDNV*SIKRVF
Trigger: GAAGACACGTTTTATGGAGCAGACATTATCCAAGGG...CAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CACTTGGCGCCTGCTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCCGGCCCAGGGAGATTTaGGAAATTTGGGAGACTTGT +
Preference number: 4 (lower is better)
Translates to: HLAPAASQESSEILLEACRPREI*EIWETC
Trigger: ACAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCG...GCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp TCATCTTCTCTCTTCCAACCCAAGCTGCTCTGTGGCCTGCAGCGATGTATGCAGTCCACTGGGGACCGCTaGGATTTCCCCAGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: SSSLFQPKLLCGLQRCMQSTGDR*DFPRFK
Trigger: CTTGAACCTGGGGAAATCCCAGCGGTCCCCAGTGGA...CTGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGAGAGAAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp GTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGTGGAGGCCTGCTAAGTaGATGGCGCCAACTCTTAGA +
Preference number: 4 (lower is better)
Translates to: VRDTPCHLCQQNSRHSPKWRPAK*MAPTLR
Trigger: TCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCA...CTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGACATCGGAGATCTTGCTaGAGGCCTGCTAAGTGGATG +
Preference number: 4 (lower is better)
Translates to: QRHTLSPMPAKLTAQPQGHRRSC*RPAKWM
Trigger: CATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATG...TCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp AAAATACCAGCAGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGGCGCGCGCCGTCACGTaGCCGCTGGGGCCCGCACTT +
Preference number: 4 (lower is better)
Translates to: KIPAAEILLMNISCCPLRARAVT*PLGPAL
Trigger: AAGTGCGGGCCCCAGCGGTCACGTGACGGCGCGCGC...CCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCTGCTGGTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR TCA 90 bp CACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTGGGTGATTCACATGCAAGGTATTTGTTaGACTCCCGGAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HKGTRLLCGSGFSLWVIHMQGIC*TPGTPP
Trigger: TGGAGGAGTTCCGGGAGTTCAACAAATACCTTGCAT...GTGAATCACCCACAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR TCA 90 bp CTCCTGGTGTGTATTCTGAACTCAGGATTGGATACTGCCTCCTTCCAGCGCTGGGTCCTGACTGCCCTGTaGCCATCTGCTGAATTGGTG +
Preference number: 4 (lower is better)
Translates to: LLVCILNSGLDTASFQRWVLTAL*PSAELV
Trigger: CACCAATTCAGCAGATGGTCACAGGGCAGTCAGGAC...CCAGCGCTGGAAGGAGGCAGTATCCAATCCTGAGTTCAGAATACACACCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp GACTTTTCACTGACCTTGAGGTCATCTGTGACTGAGTCGGGGTTAGGGACCTCTGCTTGTGGTACGGCATaGGCAGAGTGCAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: DFSLTLRSSVTESGLGTSACGTA*AECRWH
Trigger: GTGCCATCTGCACTCTGCTCATGCCGTACCACAAGC...AGAGGTCCCTAACCCCGACTCAGTCACAGATGACCTCAAGGTCAGTGAAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp TGCTCAAGATGTTCTCCTGGTGTGTATTCTGAACTCAGGATTGGATACTGCCTCGTGACAGCTGTTCGCTaGGCACGCGCACAGGACCCC +
Preference number: 4 (lower is better)
Translates to: CSRCSPGVYSELRIGYCLVTAVR*ARAQDP
Trigger: GGGGTCCTGTGCGCGTGCGCAGCGAACAGCTGTCAC...GAGGCAGTATCCAATCCTGAGTTCAGAATACACACCAGGAGAACATCTTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp GGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTGTCTTTCCTGCAAGTaGACAATTTGGCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: GPKPHKGTRLLCGSGFSLCLSCK*TIWQLF
Trigger: GAAAAGTTGCCAAATTGTGCACTTGCAGGAAAGACA...CAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR GCA 90 bp CATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTAGTCATCGGAGATCTTaGTGGAGGCCTGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: HRRSCWRPAKWMAPTLRGSHRRS*WRPAKW
Trigger: CCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACT...ACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp CACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTGGGTGATTCACATACTCTTGCTCAGCTaGGAAGTTAGGGGACTTCGT +
Preference number: 4 (lower is better)
Translates to: HKGTRLLCGSGFSLWVIHILLLS*EVRGLR
Trigger: ACGAAGTCCCCTAACTTCGCAGCTGAGCAAGAGTAT...GTGAATCACCCACAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTGGGTGATTCACCACCTCCTCTCAAATTaGAGAGACAGCATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: HKGTRLLCGSGFSLWVIHHLLSN*RDSILL
Trigger: CAGCAGAATGCTGTCTCTGCAATTTGAGAGGAGGTG...GTGAATCACCCACAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTTATTGTTCTTCGTTTaGTTAAGAGCACCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GPKPHKGTRLLCGSGFSLLLFFV*LRAPPL
Trigger: GAGAGGAGGTGCTCTTAAGCAAACGAAGAACAATAA...CAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CCGAGGTGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACAGTCCTCTCTCTTCATTaGTATCTGGGATCCATCTTC +
Preference number: 4 (lower is better)
Translates to: PRCHLLELEREVPVCFLTVLSLH*YLGSIF
Trigger: GAAGATGGATCCCAGATAGCAATGAAGAGAGAGGAC...TGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCACCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp GACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCGGCCCAGGGAGATTTaGGAAATTTGGGAGACTTGT +
Preference number: 4 (lower is better)
Translates to: DTPCHLCQQNSRHSPKDVRPREI*EIWETC
Trigger: ACAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCG...GACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CCA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAAGTCTGGCGCGCGGGTTaGGGCGAGAGCACGACTCGG +
Preference number: 4 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNEVWRAG*GESTTR
Trigger: CCGAGTCGTGCTCTCGCCCCAACCCGCGCGCCAGAC...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543771.5
CDS-3UTR CCA 90 bp CTCCTGGTGTGTATTCTGAACTCAGGATTGGATACTGCCTCCTTCCAGCGCTGGGCAAGACCCGCACGATaGGCTCCTTTAGACTCCATG +
Preference number: 4 (lower is better)
Translates to: LLVCILNSGLDTASFQRWARPAR*APLDSM
Trigger: CATGGAGTCTAAAGGAGCCCATCGTGCGGGTCTTGC...CCAGCGCTGGAAGGAGGCAGTATCCAATCCTGAGTTCAGAATACACACCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp CACTTGGCGCCTGCTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCATCATAGCACTGTCTTaGCTTCCACTCCTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: HLAPAASQESSEILLEACIIALS*LPLLRR
Trigger: CCTCCTAAGGAGTGGAAGCCAAGACAGTGCTATGAT...GCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp CCCCGTGTGTTTCCTGACAGGGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTTGCAAGTGCACAATTTaGCAACTTTTCCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: PRVFPDRALSRTRGPASSCKCTI*QLFHSQ
Trigger: TTGACTATGGAAAAGTTGCCAAATTGTGCACTTGCA...AGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCCCTGTCAGGAAACACACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CCA 90 bp CTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCGCAGATGGCACAGTGTaGCTTCATCCTGGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LWKPDLPLSETHPVTYASADGTV*LHPGHC
Trigger: ACAGTGGCCAGGATGAAGCCACACTGTGCCATCTGC...GCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp GACTGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACTGGGCACAAGTGACATaGAAGGAGGCCGGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: DCGKYINYRPTRWVPRCHWAQVT*KEAGQR
Trigger: TCGCTGCCCGGCCTCCTTCCATGTCACTTGTGCCCA...GTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CCCCGTGTGTTTCCTGACAGGGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTTCTTCAAACTCAACCTaGTACATGTGGGCAATATTT +
Preference number: 4 (lower is better)
Translates to: PRVFPDRALSRTRGPASSSSNST*YMWAIF
Trigger: AAATATTGCCCACATGTACCAGGTTGAGTTTGAAGA...AGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCCCTGTCAGGAAACACACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp GGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGCTCTTCATTGCTATCTaGGATCCATCTTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: GPKPHKGTRLLCGSGFSLLFIAI*DPSSNS
Trigger: TGAGTTTGAAGATGGATCCCAGATAGCAATGAAGAG...CAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp TTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCTTGTTCCGCACTAGGTaGCAGCTGTTCGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: LVTKLWKPDLPLSETHPVLFRTR*QLFAAH
Trigger: GTGCGCAGCGAACAGCTGTCACCTAGTGCGGAACAA...GACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR TCA 90 bp CTGATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTTTGTTCCGCACTAGGTaGCAGCTGTTCGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: LMSMTQVTLAMKARMGLILFRTR*QLFAAH
Trigger: GTGCGCAGCGAACAGCTGTCACCTAGTGCGGAACAA...AATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp TACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCTGTGACCATCTGCTaGATTGGTGCTGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: YHCQRHTLSPMPAKLTAQPVTIC*IGAGMS
Trigger: GCTCATTCCAGCACCAATTCAGCAGATGGTCACAGG...CTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR TCA 90 bp GACTGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACGAGGTCATCTGTGACTaGGTCGGGGTTAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: DCGKYINYRPTRWVPRCHEVICD*VGVRDL
Trigger: GAGGTCCCTAACCCCGACTCAGTCACAGATGACCTC...GTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp GTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGCTTCACTGCTGCTTCTaGCTTTTCACTGACCTTGAG +
Preference number: 4 (lower is better)
Translates to: VRDTPCHLCQQNSRHSPKLHCCF*LFTDLE
Trigger: CTCAAGGTCAGTGAAAAGTCAGAAGCAGCAGTGAAG...CTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp CTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCTCTGCCAAAGGTGGATaGGAGGTTTCGCCCAAGACT +
Preference number: 4 (lower is better)
Translates to: LWKPDLPLSETHPVTYASSAKGG*EVSPKT
Trigger: AGTCTTGGGCGAAACCTCTCATCCACCTTTGGCAGA...GCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp AACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCGCTTGTGGTACGGCATaGGCAGAGTGCAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: NPIYHCQRHTLSPMPAKLACGTA*AECRWH
Trigger: GTGCCATCTGCACTCTGCTCATGCCGTACCACAAGC...GAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp GACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCACTTCACGTTGGGGTTaGCCTTATGTCGAAAGCATG +
Preference number: 4 (lower is better)
Translates to: DTPCHLCQQNSRHSPKDVTSRWG*PYVESM
Trigger: CATGCTTTCGACATAAGGTCAACCCCAACGTGAAGT...GACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp CACTTGGCGCCTGCTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCATCCATTTACTTGCATaGACCCGTACGCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: HLAPAASQESSEILLEACIHLLA*TRTQHF
Trigger: AAAGTGCTGCGTACGGGTTCATGCAAGTAAATGGAT...GCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp CTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATGGCGCTTGTGGCGAAGAAATaGATCACACCCTTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LLHKSHRRSCWRPAKWMALVAKK*ITPLGA
Trigger: AGCTCCCAAGGGTGTGATGCATTTCTTCGCCACAAG...CGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp AGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCTGCTACTTCAGGGGTGGATaGTGGAGTAGGCTTCGTGTG +
Preference number: 4 (lower is better)
Translates to: RPAKWMAPTLRGFVLSLCYFRGG*WSRLRV
Trigger: CACACGAAGCCTACTCCAGCATCCACCCCTGAAGTA...GCAGAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp CATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTTAGGGGACTTCGTCTaGCAAAGGTGGATGAGAGGT +
Preference number: 4 (lower is better)
Translates to: HRRSCWRPAKWMAPTLRGLGDFV*QRWMRG
Trigger: ACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAA...ACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp CAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGACATCCTGGCCACTGTTaGATTATACTCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: QRHTLSPMPAKLTAQPQGHPGHC*IILLLS
Trigger: GCTGAGCAAGAGTATAATGCAACAGTGGCCAGGATG...TCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCCTTCATCACAGCCATCACTCTaGAACTGTAATACCGGGTGT +
Preference number: 4 (lower is better)
Translates to: PCHLCQQNSRHSPKDVPSSQPSL*NCNTGC
Trigger: ACACCCGGTATTACAGTTGCAGAGTGATGGCTGTGA...TGAAGGGACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCTTAGAACTGAGGGTCTaGCCAGGCATGGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: QTLETRFTTVRDTPCHLCLELRV*PGMVAP
Trigger: GGGAGCCACCATGCCTGGGCAGACCCTCAGTTCTAA...GCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428870.6
CDS-3UTR CCA 90 bp TGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAACACTTCCCCGGAAGCGCTGGCTaGGGTCCCGCAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: CCPLRNYGSPKSTTKEHFPGSAG*GPAGLD
Trigger: GTCCAGCCCTGCGGGACCCCAGCCAGCGCTTCCGGG...GAAGTGTTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGACGTCGAGGGGGTGGGTaGGAGGCAGCGGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRRRGGG*EAAAKA
Trigger: CGCCTTCGCCGCTGCCTCCCACCCACCCCCTCGACG...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp TGGAATGGAATCATCAGCCTCACTGGATATAGAAGGTACACTTCTATATGCATACGTCGAGGGGGTGGGTaGGAGGCAGCGGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: WNGIISLTGYRRYTSICIRRGGG*EAAAKA
Trigger: CGCCTTCGCCGCTGCCTCCCACCCACCCCCTCGACG...TATGCATATAGAAGTGTACCTTCTATATCCAGTGAGGCTGATGATTCCATTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTGTCTGGCGCGCGGGTTaGGGCGAGAGCACGACTCGG +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIVWRAG*GESTTR
Trigger: CCGAGTCGTGCTCTCGCCCCAACCCGCGCGCCAGAC...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCTGCTATTTCTCTCTCCACTaGGGACCGCTGGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: RPAKWMAPTLRGFVLSLCYFSLH*GPLGFP
Trigger: GGGAAATCCCAGCGGTCCCCAGTGGAGAGAGAAATA...GCAGAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp CAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGACCACTTCCTCCTCAATaGACAGAACCTCAGGCAATT +
Preference number: 4 (lower is better)
Translates to: QRHTLSPMPAKLTAQPQGPLPPQ*TEPQAI
Trigger: AATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGG...TCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp TACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCTGCTATCTGGCTTGTaGTACGGCATGAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: YHCQRHTLSPMPAKLTAQLLSGL*YGMSRV
Trigger: CACTCTGCTCATGCCGTACCACAAGCCAGATAGCAG...CTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp GACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCTTCATTGCTGCTATCTaGCTTGTGGTACGGCATGAG +
Preference number: 4 (lower is better)
Translates to: DTPCHLCQQNSRHSPKDVFIAAI*LVVRHE
Trigger: CTCATGCCGTACCACAAGCCAGATAGCAGCAATGAA...GACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp AACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCTTCTCCCTCAGCAGGTaGGCCCAGCTTCAGACAGTC +
Preference number: 4 (lower is better)
Translates to: NPIYHCQRHTLSPMPAKLFSLSR*AQLQTV
Trigger: GACTGTCTGAAGCTGGGCCCACCTGCTGAGGGAGAA...GAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR CAA 72 bp GTGTGGCTTCATCCTGGCCACTGTTGCATTATACTCTaGCTCAGCTGCGAAGTTAGGGGACTTCGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VWLHPGHCCIIL*LSCEVRGLRLP
Trigger: TGGCAGACGAAGTCCCCTAACTTCGCAGCTGAGCAAGAGTATAATGCAACAGTGGCCAGGATGAAGCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGGCGCGCGCCGTCACGTaGCCGCTGGGGCCCGCACTT +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALARAVT*PLGPAL
Trigger: AAGTGCGGGCCCCAGCGGTCACGTGACGGCGCGCGC...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp CTGTTTCTTCCACTTCCTCCTCAATGGACAGAACCTCAGGCAATTCTTCATCACCCTCGGCCACCTCCATaGTGGTTAGGGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LFLPLPPQWTEPQAILHHPRPPP*WLGQCL
Trigger: CAGACACTGCCCTAACCATCATGGAGGTGGCCGAGG...GTGATGAAGAATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGGAAGAAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp CATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTATGCAAGGTATTTGTTaGACTCCCGGAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HRRSCWRPAKWMAPTLRGMQGIC*TPGTPP
Trigger: TGGAGGAGTTCCGGGAGTTCAACAAATACCTTGCAT...ACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCCTGAGTGAACAGTCCTaGCTGCCCTGTGACCATCTG +
Preference number: 4 (lower is better)
Translates to: GFRLTDIEWILLDSSLWALSEQS*LPCDHL
Trigger: CAGATGGTCACAGGGCAGTCAGGACTGTTCACTCAG...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp CCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCCTTCAGGAGTAGGCTTCGTGTaGTCAATGGTGTATATATCC +
Preference number: 4 (lower is better)
Translates to: PCHLCQQNSRHSPKDVPSGVGFV*SMVYIS
Trigger: GGATATATACACCATTGATCACACGAAGCCTACTCC...TGAAGGGACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp AGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTGATGAGGTCATCTGTGACTaGGTCGGGGTTAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: RLTDIEWILLDSSLWACDEVICD*VGVRDL
Trigger: GAGGTCCCTAACCCCGACTCAGTCACAGATGACCTC...ATCACAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTGATCCGCAACGGCGCACATaGCATGGGCCCACTTATTGT +
Preference number: 4 (lower is better)
Translates to: RLTDIEWILLDSSLWACDPQRRT*HGPTYC
Trigger: ACAATAAGTGGGCCCATGTCATGTGCGCCGTTGCGG...ATCACAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AATGACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCCCGCAACGGCGCACATaGCATGGGCCCACTTATTGT +
Preference number: 4 (lower is better)
Translates to: NDLSSHSMCDNMSFSNRSPQRRT*HGPTYC
Trigger: ACAATAAGTGGGCCCATGTCATGTGCGCCGTTGCGG...GGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp CTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCCGAACAGCATCTTTCTaGAACGGTGAAGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: LWKPDLPLSETHPVTYASRTASF*NGEGLM
Trigger: CATCAGCCCTTCACCGTTTCAGAAAGATGCTGTTCG...GCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428870.6
CDS-3UTR GCA 90 bp AGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCTGCTCATCACTTGGCGCCTaGTGCTTCACAAGAGTCATC +
Preference number: 4 (lower is better)
Translates to: RPAKWMAPTLRGFVLSLCSSLGA*CFTRVI
Trigger: GATGACTCTTGTGAAGCAGCAGGCGCCAAGTGATGA...GCAGAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp TGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACAGGGCCCTCTGTAAAGGTATTCTaGCTACATCTATTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: CHLLELEREVPVCFLTGPSVKVF*LHLFVS
Trigger: GGACACAAATAGATGTAGGCAGAATACCTTTACAGA...GGGCCCTGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp TTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCCGTAGGAACACTGGATaGAGGCTCCAGAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: LVTKLWKPDLPLSETHPVRRNTG*RLQRPS
Trigger: AGAGGGTCTCTGGAGCCTGCATCCAGTGTTCCTACG...GACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GACTGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACTCTTCCAACCCAAGCTaGTCTGTGGCCTGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: DCGKYINYRPTRWVPRCHSSNPS*SVACSD
Trigger: ATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGA...GTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTGGGTGATTCACGAGATGATTTCAGATTaGTGCGTCCAATTCATTGGG +
Preference number: 4 (lower is better)
Translates to: HKGTRLLCGSGFSLWVIHEMISD*CVQFIG
Trigger: CCCAATGAATTGGACGCAGCAATCTGAAATCATCTC...GTGAATCACCCACAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGACTTGCCCGGAAGCGCTaGCTGGGGTCCCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRLARKR*LGSRRA
Trigger: AGCCCTGCGGGACCCCAGCCAGCGCTTCCGGGCAAG...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp ATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTTCTGGCACGCTCTTGCTTTaGGCTCAACTTCCGCGCTGT +
Preference number: 4 (lower is better)
Translates to: MSMTQVTLAMKARMGLISGTLLL*AQLPRC
Trigger: ACAGCGCGGAAGTTGAGCCCAAAGCAAGAGCGTGCC...AGAAATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp ATGAATATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACACGTCGAGGGGGTGGGTaGGAGGCAGCGGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: MNISCCPLRNYGSPKSTTRRGGG*EAAAKA
Trigger: CGCCTTCGCCGCTGCCTCCCACCCACCCCCTCGACG...TGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAATATTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp GACTGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACGAGAGCACGACTCGGTaGAGGAGGAAGAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: DCGKYINYRPTRWVPRCHESTTR*RRKRRQ
Trigger: CTGTCTTCTCTTCCTCCTCCACCGAGTCGTGCTCTC...GTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CCA 90 bp CAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGAAATTCTCCAGCCTCCTaGGTTATCTTGTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: QRHTLSPMPAKLTAQPQGNSPAS*VILSKG
Trigger: TCCCTTTGACAAGATAACCCAGGAGGCTGGAGAATT...TCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CCA 90 bp GGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACCTGCTGTTCAGGGGTGGATGCTaGAGTAGGCTTCGTGTGATC +
Preference number: 4 (lower is better)
Translates to: GKYINYRPTRWVPRCHLLFRGGC*SRLRVI
Trigger: GATCACACGAAGCCTACTCCAGCATCCACCCCTGAA...CAGCAGGTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CACTTGGCGCCTGCTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCATAGCCACTAGACAATaGAATGGAATCATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: HLAPAASQESSEILLEACIATRQ*NGIISL
Trigger: GAGGCTGATGATTCCATTCCATTGTCTAGTGGCTAT...GCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp ATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTCTCAACATCTGTCAGCCCTCCACTGGGGACCGCTaGGATTTCCCCAGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: MCDNMSFSNRSVLNICQPSTGDR*DFPRFK
Trigger: CTTGAACCTGGGGAAATCCCAGCGGTCCCCAGTGGA...GGGCTGACAGATGTTGAGAACGGACCTGTTGCTGAAGCTCATGTTATCACACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp GGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACCTGCTGTATTTCTCTCTCCACTaGGGACCGCTGGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: GKYINYRPTRWVPRCHLLYFSLH*GPLGFP
Trigger: GGGAAATCCCAGCGGTCCCCAGTGGAGAGAGAAATA...CAGCAGGTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CCACTTCCTCCTCAATGGACAGAACCTCAGGCAATTCTTCATCACTTGGCGCCTTGGAGGCCTGCTAAGTaGATGGCGCCAACTCTTAGA +
Preference number: 4 (lower is better)
Translates to: PLPPQWTEPQAILHHLAPWRPAK*MAPTLR
Trigger: TCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCA...AGGCGCCAAGTGATGAAGAATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTGCAGATGGCACAGTGTaGCTTCATCCTGGCCACTGT +
Preference number: 4 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVADGTV*LHPGHC
Trigger: ACAGTGGCCAGGATGAAGCCACACTGTGCCATCTGC...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp CAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATTGGTGACCAAACTCTaGAAACCCGATTTACCACTG +
Preference number: 4 (lower is better)
Translates to: QRHTLSPMPAKLTAQPQGLVTKL*KPDLPL
Trigger: CAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAA...TCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp GACTGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACTCTGCCCAGGCATGGTaGCTCCCACTTGTACCAGAA +
Preference number: 4 (lower is better)
Translates to: DCGKYINYRPTRWVPRCHSAQAW*LPLVPE
Trigger: TTCTGGTACAAGTGGGAGCCACCATGCCTGGGCAGA...GTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428870.6
CDS-3UTR CCA 90 bp AGCTGCGAAGTTAGGGGACTTCGTCTGCCAAAGGTGGATGAGAGGTTTCGCCCAGTAGACCTAGCACACTaGAAGCTGGAAACCAAGTCA +
Preference number: 4 (lower is better)
Translates to: SCEVRGLRLPKVDERFRPVDLAH*KLETKS
Trigger: TGACTTGGTTTCCAGCTTCCAGTGTGCTAGGTCTAC...TGGGCGAAACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCCGCAGGGCTGGACCTaGTGTAGTCCACGCGCCACA +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIPQGWT*CSPRAT
Trigger: TGTGGCGCGTGGACTACATCAGGTCCAGCCCTGCGG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp GACTTTTCACTGACCTTGAGGTCATCTGTGACTGAGTCGGGGTTAGGGACCTCTCCTCCATGGAGGGTCTaGAGGTCATTATCTTACAGC +
Preference number: 4 (lower is better)
Translates to: DFSLTLRSSVTESGLGTSPPWRV*RSLSYS
Trigger: GCTGTAAGATAATGACCTTCAGACCCTCCATGGAGG...AGAGGTCCCTAACCCCGACTCAGTCACAGATGACCTCAAGGTCAGTGAAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCCCTGTGACCATCTGCTaGATTGGTGCTGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: GFRLTDIEWILLDSSLWAPVTIC*IGAGMS
Trigger: GCTCATTCCAGCACCAATTCAGCAGATGGTCACAGG...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp GACTGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACTCTGCCAAAGGTGGATaGGAGGTTTCGCCCAAGACT +
Preference number: 4 (lower is better)
Translates to: DCGKYINYRPTRWVPRCHSAKGG*EVSPKT
Trigger: AGTCTTGGGCGAAACCTCTCATCCACCTTTGGCAGA...GTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp AGCTGCGAAGTTAGGGGACTTCGTCTGCCAAAGGTGGATGAGAGGTTTCGCCCAGGAAATATCAACACCTaGGTTAGTTCTGCACCTCAG +
Preference number: 4 (lower is better)
Translates to: SCEVRGLRLPKVDERFRPGNINT*VSSAPQ
Trigger: CTGAGGTGCAGAACTAACTCAGGTGTTGATATTTCC...TGGGCGAAACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp CATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTCCTGGTGTGTATTCTaGACTCAGGATTGGATACTG +
Preference number: 4 (lower is better)
Translates to: HRRSCWRPAKWMAPTLRGSWCVF*TQDWIL
Trigger: CAGTATCCAATCCTGAGTTCAGAATACACACCAGGA...ACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGGGAAAGTCCAGGGTCTaGCTCAATCAGGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLGKSRV*LNQELR
Trigger: CCTGAGCTCCTGATTGAGTCAGACCCTGGACTTTCC...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp TTCTGCTCCACCTGCATCCTGCTAGCAGATGACTCTTCTTCTGAAGATGCTTCTAGGAGGAATCACCTTTaGAAGACCCGCACGATGGGC +
Preference number: 4 (lower is better)
Translates to: FCSTCILLADDSSSEDASRRNHL*KTRTMG
Trigger: GCCCATCGTGCGGGTCTTGCAAAGGTGATTCCTCCT...AGAAGCATCTTCAGAAGAAGAGTCATCTGCTAGCAGGATGCAGGTGGAGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp AGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTGATAGGAGGAATCACCTTTaGAAGACCCGCACGATGGGC +
Preference number: 4 (lower is better)
Translates to: RLTDIEWILLDSSLWACDRRNHL*KTRTMG
Trigger: GCCCATCGTGCGGGTCTTGCAAAGGTGATTCCTCCT...ATCACAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTTACTTCAGGGGTGGATaGTGGAGTAGGCTTCGTGTG +
Preference number: 4 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVYFRGG*WSRLRV
Trigger: CACACGAAGCCTACTCCAGCATCCACCCCTGAAGTA...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp CAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCAGTCATCGGAGATCTTaGTGGAGGCCTGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: QTLETRFTTVRDTPCHLCSHRRS*WRPAKW
Trigger: CCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACT...GCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGAAATACCATAACAACTTaGATGAACCCGTACGCAGCA +
Preference number: 4 (lower is better)
Translates to: QRHTLSPMPAKLTAQPQGNTITT*MNPYAA
Trigger: TGCTGCGTACGGGTTCATGCAAGTTGTTATGGTATT...TCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTTCCACGCATTTCTTTTaGACCGGGCACACAGCCATC +
Preference number: 4 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVSTHFF*TGHTAI
Trigger: GATGGCTGTGTGCCCGGTGCAAAAGAAATGCGTGGA...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTCCACGCATTTCTTTTaGACCGGGCACACAGCCATC +
Preference number: 4 (lower is better)
Translates to: GFRLTDIEWILLDSSLWASTHFF*TGHTAI
Trigger: GATGGCTGTGTGCCCGGTGCAAAAGAAATGCGTGGA...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp TACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCACCTCCTCTCAAATTaGAGAGACAGCATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: YHCQRHTLSPMPAKLTAQHLLSN*RDSILL
Trigger: CAGCAGAATGCTGTCTCTGCAATTTGAGAGGAGGTG...CTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CCGAGGTGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACAGGTGTCTGCAGAAGATaGATTTCAATTTTAACCTCT +
Preference number: 4 (lower is better)
Translates to: PRCHLLELEREVPVCFLTGVCRR*ISILTS
Trigger: AGAGGTTAAAATTGAAATGCATCTTCTGCAGACACC...TGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCACCTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGCCCTTGGATAATGTCTaGTCCATAAAACGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: VRDTPCHLCQQNSRHSPKPLDNV*SIKRVF
Trigger: GAAGACACGTTTTATGGAGCAGACATTATCCAAGGG...CTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACCTGCTGGCCTGCAGCGATGTATaGAGACTACTGTCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GKYINYRPTRWVPRCHLLACSDV*RLLSLL
Trigger: CAGAAGAGACAGTAGTCTGCATACATCGCTGCAGGC...CAGCAGGTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GACTGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACAGCTGCTCTGTGGCCTaGAGCGATGTATGCAGACTA +
Preference number: 4 (lower is better)
Translates to: DCGKYINYRPTRWVPRCHSCSVA*SDVCRL
Trigger: TAGTCTGCATACATCGCTGCAGGCCACAGAGCAGCT...GTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCGAGATGATTTCAGATTaGTGCGTCCAATTCATTGGG +
Preference number: 4 (lower is better)
Translates to: DTPCHLCQQNSRHSPKDVEMISD*CVQFIG
Trigger: CCCAATGAATTGGACGCAGCAATCTGAAATCATCTC...GACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp TGTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACGCTGGGTACCGAGGTaGCACCTGCTGGAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: CIFGDQTLETRFTTVRDTRWVPR*HLLELE
Trigger: CTCTAGCTCCAGCAGGTGGCACCTCGGTACCCAGCG...TGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCCCGGAAGCGCTGGCTaGGGTCCCGCAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALPGSAG*GPAGLD
Trigger: GTCCAGCCCTGCGGGACCCCAGCCAGCGCTTCCGGG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp ACTGCTTCTGCTTTAAGGTGTCAGTATGATGCATCATATTTCCTGTTTTCCAAACTTGCCCGGAAGCGCTaGCTGGGGTCCCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TASALRCQYDASYFLFSKLARKR*LGSRRA
Trigger: AGCCCTGCGGGACCCCAGCCAGCGCTTCCGGGCAAG...TTTGGAAAACAGGAAATATGATGCATCATACTGACACCTTAAAGCAGAAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCCGTCACGTGACCGCTaGGGCCCGCACTTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIPSRDR*GPHLVS
Trigger: ACTCACCAAGTGCGGGCCCCAGCGGTCACGTGACGG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp ATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAACTCCCGTCGAGGGGGTaGGTGGGAGGCAGCGGCGAA +
Preference number: 4 (lower is better)
Translates to: ISCCPLRNYGSPKSTTKELPSRG*VGGSGE
Trigger: TTCGCCGCTGCCTCCCACCCACCCCCTCGACGGGAG...TTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp TTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTAGGAAGAGAAGACAGTaGCCTCCGGCCCAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: FLVTKLWKPDLPLSETHPRKRRQ*PPAQGD
Trigger: ATCTCCCTGGGCCGGAGGCCACTGTCTTCTCTTCCT...AGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CCA 90 bp AATACTGCTTCTGCTTTAAGGTGTCAGTATGATGCATCATATTTCCTGTTTTCCGTCTGGCGCGCGGGTTaGGGCGAGAGCACGACTCGG +
Preference number: 4 (lower is better)
Translates to: NTASALRCQYDASYFLFSVWRAG*GESTTR
Trigger: CCGAGTCGTGCTCTCGCCCCAACCCGCGCGCCAGAC...GGAAAACAGGAAATATGATGCATCATACTGACACCTTAAAGCAGAAGCAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp GACTGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACTATTTCTCTCTCCACTaGGGACCGCTGGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: DCGKYINYRPTRWVPRCHYFSLH*GPLGFP
Trigger: GGGAAATCCCAGCGGTCCCCAGTGGAGAGAGAAATA...GTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp TCATCTTCTCTCTTCCAACCCAAGCTGCTCTGTGGCCTGCAGCGATGTATGCAGTTCATTGCTGCTATCTaGCTTGTGGTACGGCATGAG +
Preference number: 4 (lower is better)
Translates to: SSSLFQPKLLCGLQRCMQFIAAI*LVVRHE
Trigger: CTCATGCCGTACCACAAGCCAGATAGCAGCAATGAA...CTGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGAGAGAAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CCGAGGTGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACACTTCAAGGAAGGCATTaGGTGGAGAATATTCTATAT +
Preference number: 4 (lower is better)
Translates to: PRCHLLELEREVPVCFLTLQGRH*VENILY
Trigger: ATATAGAATATTCTCCACCCAATGCCTTCCTTGAAG...TGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCACCTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp ATACCAGCAGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGAATCCGCAGGGCTGGACCTaGTGTAGTCCACGCGCCACA +
Preference number: 4 (lower is better)
Translates to: IPAAEILLMNISCCPLRNPQGWT*CSPRAT
Trigger: TGTGGCGCGTGGACTACATCAGGTCCAGCCCTGCGG...ATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCTGCTGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR TCA 90 bp CAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCAAGCTCGGATGGGTCTaGTTTCTCGGGCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: QTLETRFTTVRDTPCHLCKLGWV*FLGLLI
Trigger: TATGAGAAGCCCGAGAAATCAGACCCATCCGAGCTT...GCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCAAGCTCGGATGGGTCTaGTTTCTCGGGCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: GFRLTDIEWILLDSSLWAKLGWV*FLGLLI
Trigger: TATGAGAAGCCCGAGAAATCAGACCCATCCGAGCTT...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp TCATCTTCTCTCTTCCAACCCAAGCTGCTCTGTGGCCTGCAGCGATGTATGCAGCTATACTGGGGACTTTaGAGCTATTTCTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SSSLFQPKLLCGLQRCMQLYWGL*SYFSLH
Trigger: GTGGAGAGAGAAATAGCTTCAAAGTCCCCAGTATAG...CTGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGAGAGAAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTGCTTGTGGTACGGCATaGGCAGAGTGCAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPACGTA*AECRWH
Trigger: GTGCCATCTGCACTCTGCTCATGCCGTACCACAAGC...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp GACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCGCTTTTCCTTGTGGGTaGTTCACTAGTATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: DTPCHLCQQNSRHSPKDVAFPCG*FTSISF
Trigger: AAAGGAAATACTAGTGAATCACCCACAAGGAAAAGC...GACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp ATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTTCTAAAGGAACCCCATCATaGCTCCTCAACTGGACCCCA +
Preference number: 4 (lower is better)
Translates to: MSMTQVTLAMKARMGLISKGTPS*LLNWTP
Trigger: TGGGGTCCAGTTGAGGAGTCATGATGGGGTTCCTTT...AGAAATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTAAGCCTCTGGGCCTGTaGTGTGCTGTAGAAAAATGG +
Preference number: 4 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVKPLGL*CAVEKW
Trigger: CCATTTTTCTACAGCACATCACAGGCCCAGAGGCTT...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTAGGTGCACAGAACCTTaGCCGGAAGCGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIRCTEP*PEALAG
Trigger: CCCAGCCAGCGCTTCCGGGCAAGGTTCTGTGCACCT...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp ATACCAGCAGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGAATGTGACAGCTGTTCGCTaGGCACGCGCACAGGACCCC +
Preference number: 4 (lower is better)
Translates to: IPAAEILLMNISCCPLRNVTAVR*ARAQDP
Trigger: GGGGTCCTGTGCGCGTGCGCAGCGAACAGCTGTCAC...ATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCTGCTGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR GCA 90 bp GTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGCATCTGCTGAATTGGTaGTGGAATGAGCAAATTATC +
Preference number: 4 (lower is better)
Translates to: VRDTPCHLCQQNSRHSPKHLLNW*WNEQII
Trigger: GATAATTTGCTCATTCCAGCACCAATTCAGCAGATG...CTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR GCA 90 bp TTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCCTTGTGGCGAAGAAATaGATCACACCCTTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LVTKLWKPDLPLSETHPVLVAKK*ITPLGA
Trigger: AGCTCCCAAGGGTGTGATGCATTTCTTCGCCACAAG...GACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR GCA 90 bp CATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTCACCATGTCTTTCCTaGAAGTGCACAATTTGGCAA +
Preference number: 4 (lower is better)
Translates to: HRRSCWRPAKWMAPTLRGSPCLS*KCTIWQ
Trigger: TTGCCAAATTGTGCACTTGCAGGAAAGACATGGTGA...ACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGAGTCATCGGAGATCTTaGTGGAGGCCTGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLSHRRS*WRPAKW
Trigger: CCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACT...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp ATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTTCTTCACTTGGCGCCTGCTaGTTCACAAGAGTCATCGGA +
Preference number: 4 (lower is better)
Translates to: MSMTQVTLAMKARMGLISSLGAC*FTRVIG
Trigger: TCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTGA...AGAAATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp GACTGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACTCATCACTTGGCGCCTaGTGCTTCACAAGAGTCATC +
Preference number: 4 (lower is better)
Translates to: DCGKYINYRPTRWVPRCHSSLGA*CFTRVI
Trigger: GATGACTCTTGTGAAGCAGCAGGCGCCAAGTGATGA...GTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp TTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCTCATCACTTGGCGCCTaGTGCTTCACAAGAGTCATC +
Preference number: 4 (lower is better)
Translates to: LVTKLWKPDLPLSETHPVSSLGA*CFTRVI
Trigger: GATGACTCTTGTGAAGCAGCAGGCGCCAAGTGATGA...GACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCTTAGGGGACTTCGTCTaGCAAAGGTGGATGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QTLETRFTTVRDTPCHLCLGDFV*QRWMRG
Trigger: ACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAA...GCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGAATGATTTCAGATTGCTaGGTCCAATTCATTGGGTGT +
Preference number: 4 (lower is better)
Translates to: QRHTLSPMPAKLTAQPQGMISDC*VQFIGC
Trigger: ACACCCAATGAATTGGACGCAGCAATCTGAAATCAT...TCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATGGCGTCCATGACAGAACAATaGTCAAGATGTTCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LLHKSHRRSCWRPAKWMASMTEQ*SRCSPG
Trigger: ACCAGGAGAACATCTTGAGCATTGTTCTGTCATGGA...CGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp TGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAACACTTCCCGTCACGTGACCGCTaGGGCCCGCACTTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: CCPLRNYGSPKSTTKEHFPSRDR*GPHLVS
Trigger: ACTCACCAAGTGCGGGCCCCAGCGGTCACGTGACGG...GAAGTGTTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp TGGAATGGAATCATCAGCCTCACTGGATATAGAAGGTACACTTCTATATGCATACCGTCACGTGACCGCTaGGGCCCGCACTTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: WNGIISLTGYRRYTSICIPSRDR*GPHLVS
Trigger: ACTCACCAAGTGCGGGCCCCAGCGGTCACGTGACGG...TATGCATATAGAAGTGTACCTTCTATATCCAGTGAGGCTGATGATTCCATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCTCCCGTCGAGGGGGTaGGTGGGAGGCAGCGGCGAA +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALLPSRG*VGGSGE
Trigger: TTCGCCGCTGCCTCCCACCCACCCCCTCGACGGGAG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTGATTTCAGGGGTGGATGCTaGAGTAGGCTTCGTGTGATC +
Preference number: 4 (lower is better)
Translates to: RLTDIEWILLDSSLWACDFRGGC*SRLRVI
Trigger: GATCACACGAAGCCTACTCCAGCATCCACCCCTGAA...ATCACAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTTCCACTGGGGACCGCTaGGATTTCCCCAGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: YCRCCILNANDLSSHSMCSTGDR*DFPRFK
Trigger: CTTGAACCTGGGGAAATCCCAGCGGTCCCCAGTGGA...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp ATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTCTCAACATCTGTCAGCCCTATTTCTCTCTCCACTaGGGACCGCTGGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: MCDNMSFSNRSVLNICQPYFSLH*GPLGFP
Trigger: GGGAAATCCCAGCGGTCCCCAGTGGAGAGAGAAATA...GGGCTGACAGATGTTGAGAACGGACCTGTTGCTGAAGCTCATGTTATCACACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp CACTTGGCGCCTGCTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCCTTCAAGGAAGGCATTaGGTGGAGAATATTCTATAT +
Preference number: 4 (lower is better)
Translates to: HLAPAASQESSEILLEACLQGRH*VENILY
Trigger: ATATAGAATATTCTCCACCCAATGCCTTCCTTGAAG...GCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp CAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCACGGCGCACATGACATaGGCCCACTTATTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: QTLETRFTTVRDTPCHLCTAHMT*AHLLFF
Trigger: GAAGAACAATAAGTGGGCCCATGTCATGTGCGCCGT...GCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCCTTCACTCTTCATTGCTATCTaGGATCCATCTTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: PCHLCQQNSRHSPKDVPSLFIAI*DPSSNS
Trigger: TGAGTTTGAAGATGGATCCCAGATAGCAATGAAGAG...TGAAGGGACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CCGAGGTGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACACTTAGAAAACTTCTTTaGGATCATAGAAGACAACTG +
Preference number: 4 (lower is better)
Translates to: PRCHLLELEREVPVCFLTLRKLL*DHRRQL
Trigger: CAGTTGTCTTCTATGATCCCAAAGAAGTTTTCTAAG...TGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCACCTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCCTCGGCCACCTCCATaGTGGTTAGGGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIPRPPP*WLGQCL
Trigger: CAGACACTGCCCTAACCATCATGGAGGTGGCCGAGG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp CACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGATCCTCGGCCACCTCCATaGTGGTTAGGGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: HLNSKYVQLLCCAARRKDPRPPP*WLGQCL
Trigger: CAGACACTGCCCTAACCATCATGGAGGTGGCCGAGG...ATCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp TCACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGACCTCGGCCACCTCCATaGTGGTTAGGGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SPKLKIRSVALLCSKKEGPRPPP*WLGQCL
Trigger: CAGACACTGCCCTAACCATCATGGAGGTGGCCGAGG...TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGCCTCCATGGAGGGTCTaGAGGTCATTATCTTACAGC +
Preference number: 4 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLPPWRV*RSLSYS
Trigger: GCTGTAAGATAATGACCTTCAGACCCTCCATGGAGG...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp CATCTAGCATCATTTTCTTCATTGCTGCTATCTGGCTTGTGGTACGGCATGAGCCCTGTGACCATCTGCTaGATTGGTGCTGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: HLASFSSLLLSGLWYGMSPVTIC*IGAGMS
Trigger: GCTCATTCCAGCACCAATTCAGCAGATGGTCACAGG...GCTCATGCCGTACCACAAGCCAGATAGCAGCAATGAAGAAAATGATGCTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp GTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCTGAGTGAACAGTCCTaGCTGCCCTGTGACCATCTG +
Preference number: 4 (lower is better)
Translates to: VFLVTKLWKPDLPLSETHLSEQS*LPCDHL
Trigger: CAGATGGTCACAGGGCAGTCAGGACTGTTCACTCAG...GTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR TCA 90 bp TTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCTTCTGGATGTTGTACTaGGTGAACAGTCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: LVTKLWKPDLPLSETHPVFWMLY*VNSPDC
Trigger: GCAGTCAGGACTGTTCACTCAGTACAACATCCAGAA...GACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR TCA 90 bp GATAAATTCTGCTCCACCTGCATCCTGCTAGCAGATGACTCTTCTTCTGAAGATTGTTGGCCAGCTGCCTaGACTCCTTCACAGTCATCG +
Preference number: 4 (lower is better)
Translates to: DKFCSTCILLADDSSSEDCWPAA*TPSQSS
Trigger: CGATGACTGTGAAGGAGTTCAGGCAGCTGGCCAACA...ATCTTCAGAAGAAGAGTCATCTGCTAGCAGGATGCAGGTGGAGCAGAATTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTTGTTGGCCAGCTGCCTaGACTCCTTCACAGTCATCG +
Preference number: 4 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPCWPAA*TPSQSS
Trigger: CGATGACTGTGAAGGAGTTCAGGCAGCTGGCCAACA...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp TGTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACAGCTTGTGGTACGGCATaGGCAGAGTGCAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: CIFGDQTLETRFTTVRDTACGTA*AECRWH
Trigger: GTGCCATCTGCACTCTGCTCATGCCGTACCACAAGC...TGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp CTGTACAAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCCCGCAACGGCGCACATaGCATGGGCCCACTTATTGT +
Preference number: 4 (lower is better)
Translates to: LYKGNTDSTRVNLISIHAPQRRT*HGPTYC
Trigger: ACAATAAGTGGGCCCATGTCATGTGCGCCGTTGCGG...GGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTTGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp CTGTACAAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCTGCCATCGGGCCACTTaGCTTGGACGACTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LYKGNTDSTRVNLISIHACHRAT*LGRLLP
Trigger: AGGGAGAAGTCGTCCAAGTCAAGTGGCCCGATGGCA...GGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTTGTACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp AATGACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGCATGTGTGATAACATaGGCTTCAGCAACAGGTCCG +
Preference number: 4 (lower is better)
Translates to: NDLSSHSMCDNMSFSNRSACVIT*ASATGP
Trigger: CGGACCTGTTGCTGAAGCTCATGTTATCACACATGC...GGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCCATCTTGAATGCCAATaGCCTCTCTTCCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: GFRLTDIEWILLDSSLWAHLECQ*PLFPQH
Trigger: ATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATG...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp TGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAACACTTCAGGTGCACAGAACCTTaGCCGGAAGCGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CCPLRNYGSPKSTTKEHFRCTEP*PEALAG
Trigger: CCCAGCCAGCGCTTCCGGGCAAGGTTCTGTGCACCT...GAAGTGTTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR GCA 90 bp AGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTGATCTTGTGGCGAAGAAATaGATCACACCCTTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RLTDIEWILLDSSLWACDLVAKK*ITPLGA
Trigger: AGCTCCCAAGGGTGTGATGCATTTCTTCGCCACAAG...ATCACAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp CTGATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTAAATTCTGCTCCACCTaGATCCTGCTAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: LMSMTQVTLAMKARMGLIKFCST*ILLADD
Trigger: GTCATCTGCTAGCAGGATGCAGGTGGAGCAGAATTT...AATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp GTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGAGGTACACTTCTATATaGATAAGCTTTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: VRDTPCHLCQQNSRHSPKRYTSI*ISFVIL
Trigger: GAGGATGACAAAGCTTATGCATATAGAAGTGTACCT...CTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp TGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTGATTCACTTGGCGCCTGCTaGTTCACAAGAGTCATCGGA +
Preference number: 4 (lower is better)
Translates to: CRCCILNANDLSSHSMCDSLGAC*FTRVIG
Trigger: TCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTGA...ATCACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp AACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCATACTCTTGCTCAGCTaGGAAGTTAGGGGACTTCGT +
Preference number: 4 (lower is better)
Translates to: NPIYHCQRHTLSPMPAKLILLLS*EVRGLR
Trigger: ACGAAGTCCCCTAACTTCGCAGCTGAGCAAGAGTAT...GAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTATACTCTTGCTCAGCTaGGAAGTTAGGGGACTTCGT +
Preference number: 4 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVILLLS*EVRGLR
Trigger: ACGAAGTCCCCTAACTTCGCAGCTGAGCAAGAGTAT...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp TACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCATTTTCTTCATTGCTaGTATCTGGCTTGTGGTACG +
Preference number: 4 (lower is better)
Translates to: YHCQRHTLSPMPAKLTAQHFLHC*YLACGT
Trigger: CGTACCACAAGCCAGATAGCAGCAATGAAGAAAATG...CTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp TCATCTTCTCTCTTCCAACCCAAGCTGCTCTGTGGCCTGCAGCGATGTATGCAGCATTTTCTTCATTGCTaGTATCTGGCTTGTGGTACG +
Preference number: 4 (lower is better)
Translates to: SSSLFQPKLLCGLQRCMQHFLHC*YLACGT
Trigger: CGTACCACAAGCCAGATAGCAGCAATGAAGAAAATG...CTGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGAGAGAAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp TGGAGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCATAGATCCATTTACTTaGATGAACCCGTACGCAGCA +
Preference number: 4 (lower is better)
Translates to: WRPAKWMAPTLRGFVLSLIDPFT*MNPYAA
Trigger: TGCTGCGTACGGGTTCATGCAAGTAAATGGATCTAT...GAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp CAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGAGCTTCGTGTGATCAATaGTGTATATATCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: QRHTLSPMPAKLTAQPQGASCDQ*CIYPFL
Trigger: AAGGAAAGGATATATACACCATTGATCACACGAAGC...TCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCGTAGACCTAGCACACTaGAAGCTTCGGGATGCTTTT +
Preference number: 4 (lower is better)
Translates to: GFRLTDIEWILLDSSLWAVDLAH*KLRDAF
Trigger: AAAAGCATCCCGAAGCTTCCAGTGTGCTAGGTCTAC...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp TCATCTTCTCTCTTCCAACCCAAGCTGCTCTGTGGCCTGCAGCGATGTATGCAGATAGCCACTAGACAATaGAATGGAATCATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SSSLFQPKLLCGLQRCMQIATRQ*NGIISL
Trigger: GAGGCTGATGATTCCATTCCATTGTCTAGTGGCTAT...CTGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGAGAGAAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CTGATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTCAATTCTTCATCACTTaGCGCCTGCTGCTTCACAAG +
Preference number: 4 (lower is better)
Translates to: LMSMTQVTLAMKARMGLIQFFIT*RLLLHK
Trigger: CTTGTGAAGCAGCAGGCGCCAAGTGATGAAGAATTG...AATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp TGCTCAAGATGTTCTCCTGGTGTGTATTCTGAACTCAGGATTGGATACTGCCTCCTGCTATCTGGCTTGTaGTACGGCATGAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: CSRCSPGVYSELRIGYCLLLSGL*YGMSRV
Trigger: CACTCTGCTCATGCCGTACCACAAGCCAGATAGCAG...GAGGCAGTATCCAATCCTGAGTTCAGAATACACACCAGGAGAACATCTTGAGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp AATGACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCACGGCGCACATGACATaGGCCCACTTATTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: NDLSSHSMCDNMSFSNRSTAHMT*AHLLFF
Trigger: GAAGAACAATAAGTGGGCCCATGTCATGTGCGCCGT...GGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTGGGCACAAGTGACATaGAAGGAGGCCGGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIWAQVT*KEAGQR
Trigger: TCGCTGCCCGGCCTCCTTCCATGTCACTTGTGCCCA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp GACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCTCTTCAAACTCAACCTaGTACATGTGGGCAATATTT +
Preference number: 4 (lower is better)
Translates to: DTPCHLCQQNSRHSPKDVSSNST*YMWAIF
Trigger: AAATATTGCCCACATGTACCAGGTTGAGTTTGAAGA...GACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp TTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTCCTCCTCTGTGGCAGTaGCTTTTCCTTGTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: FLVTKLWKPDLPLSETHPPPLWQ*LFLVGD
Trigger: ATCACCCACAAGGAAAAGCCACTGCCACAGAGGAGG...AGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp ATACCAGCAGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGAATGGGGCCCGCACTTGGTaGGTCACGTGGGCTTACAAA +
Preference number: 4 (lower is better)
Translates to: IPAAEILLMNISCCPLRNGARTW*VTWAYK
Trigger: TTTGTAAGCCCACGTGACTCACCAAGTGCGGGCCCC...ATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCTGCTGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR TCA 90 bp ATACCAGCAGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGAATCCTCGGCCACCTCCATaGTGGTTAGGGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: IPAAEILLMNISCCPLRNPRPPP*WLGQCL
Trigger: CAGACACTGCCCTAACCATCATGGAGGTGGCCGAGG...ATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCTGCTGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR TCA 90 bp AGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTGATATGCAAGGTATTTGTTaGACTCCCGGAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RLTDIEWILLDSSLWACDMQGIC*TPGTPP
Trigger: TGGAGGAGTTCCGGGAGTTCAACAAATACCTTGCAT...ATCACAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATTGATGGTCCTGACTGCCCTGTaGCCATCTGCTGAATTGGTG +
Preference number: 4 (lower is better)
Translates to: KQHLKQWRRGCNFPNELMVLTAL*PSAELV
Trigger: CACCAATTCAGCAGATGGTCACAGGGCAGTCAGGAC...CATCAATTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTTCTGGATGTTGTACTaGGTGAACAGTCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLFWMLY*VNSPDC
Trigger: GCAGTCAGGACTGTTCACTCAGTACAACATCCAGAA...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATTGATGTGTTGGCCAGCTGCCTaGACTCCTTCACAGTCATCG +
Preference number: 4 (lower is better)
Translates to: KQHLKQWRRGCNFPNELMCWPAA*TPSQSS
Trigger: CGATGACTGTGAAGGAGTTCAGGCAGCTGGCCAACA...CATCAATTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp GACTGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACCATCCAAGACTGTATTaGGGCGAGCTATGTTCCATT +
Preference number: 4 (lower is better)
Translates to: DCGKYINYRPTRWVPRCHHPRLY*GELCSI
Trigger: AATGGAACATAGCTCGCCTCAATACAGTCTTGGATG...GTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR TCA 90 bp CTGATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTGGAGTAGGCTTCGTGTaGTCAATGGTGTATATATCC +
Preference number: 4 (lower is better)
Translates to: LMSMTQVTLAMKARMGLIGVGFV*SMVYIS
Trigger: GGATATATACACCATTGATCACACGAAGCCTACTCC...AATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp ATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTCTCAACATCTGTCAGCCCCTTCACTGCTGCTTCTaGCTTTTCACTGACCTTGAG +
Preference number: 4 (lower is better)
Translates to: MCDNMSFSNRSVLNICQPLHCCF*LFTDLE
Trigger: CTCAAGGTCAGTGAAAAGTCAGAAGCAGCAGTGAAG...GGGCTGACAGATGTTGAGAACGGACCTGTTGCTGAAGCTCATGTTATCACACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp TGCTCAAGATGTTCTCCTGGTGTGTATTCTGAACTCAGGATTGGATACTGCCTCAAGCTCGGATGGGTCTaGTTTCTCGGGCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: CSRCSPGVYSELRIGYCLKLGWV*FLGLLI
Trigger: TATGAGAAGCCCGAGAAATCAGACCCATCCGAGCTT...GAGGCAGTATCCAATCCTGAGTTCAGAATACACACCAGGAGAACATCTTGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp TGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTGATAAGCTCGGATGGGTCTaGTTTCTCGGGCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: CRCCILNANDLSSHSMCDKLGWV*FLGLLI
Trigger: TATGAGAAGCCCGAGAAATCAGACCCATCCGAGCTT...ATCACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp CTGATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTCTATACTGGGGACTTTaGAGCTATTTCTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LMSMTQVTLAMKARMGLILYWGL*SYFSLH
Trigger: GTGGAGAGAGAAATAGCTTCAAAGTCCCCAGTATAG...AATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp GAAAATGACAGATACAAAAGGGAAAGTCCAGGGTCTGACTCAATCAGGAGCTCATCTGCCAAAGGTGGATaGGAGGTTTCGCCCAAGACT +
Preference number: 4 (lower is better)
Translates to: ENDRYKRESPGSDSIRSSSAKGG*EVSPKT
Trigger: AGTCTTGGGCGAAACCTCTCATCCACCTTTGGCAGA...TGAGCTCCTGATTGAGTCAGACCCTGGACTTTCCCTTTTGTATCTGTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTGCTTGTGGTACGGCATaGGCAGAGTGCAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIACGTA*AECRWH
Trigger: GTGCCATCTGCACTCTGCTCATGCCGTACCACAAGC...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp TCACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGAGCTTGTGGTACGGCATaGGCAGAGTGCAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: SPKLKIRSVALLCSKKEGACGTA*AECRWH
Trigger: GTGCCATCTGCACTCTGCTCATGCCGTACCACAAGC...TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp CTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATGGCGATGCTGAAAAGCCAGTaGTTGATGAATTATAGATCC +
Preference number: 4 (lower is better)
Translates to: LLHKSHRRSCWRPAKWMAMLKSQ*LMNYRS
Trigger: GGATCTATAATTCATCAATCACTGGCTTTTCAGCAT...CGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGGTGACAGCTGTTCGCTaGGCACGCGCACAGGACCCC +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALVTAVR*ARAQDP
Trigger: GGGGTCCTGTGCGCGTGCGCAGCGAACAGCTGTCAC...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp GACTGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACTCAAGTCGTTTTCCATaGTCCGGAGGTATAGCATAC +
Preference number: 4 (lower is better)
Translates to: DCGKYINYRPTRWVPRCHSSRFP*SGGIAY
Trigger: GTATGCTATACCTCCGGAGCATGGAAAACGACTTGA...GTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR GCA 90 bp CTGATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTTCAAGTCGTTTTCCATaGTCCGGAGGTATAGCATAC +
Preference number: 4 (lower is better)
Translates to: LMSMTQVTLAMKARMGLISSRFP*SGGIAY
Trigger: GTATGCTATACCTCCGGAGCATGGAAAACGACTTGA...AATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTTCAAGTCGTTTTCCATaGTCCGGAGGTATAGCATAC +
Preference number: 4 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVSSRFP*SGGIAY
Trigger: GTATGCTATACCTCCGGAGCATGGAAAACGACTTGA...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp TGGAGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCTGTCTTTCCTGCAAGTaGACAATTTGGCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: WRPAKWMAPTLRGFVLSLCLSCK*TIWQLF
Trigger: GAAAAGTTGCCAAATTGTGCACTTGCAGGAAAGACA...GAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp GGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACCTGCTGTCACCATGTCTTTCCTaGAAGTGCACAATTTGGCAA +
Preference number: 4 (lower is better)
Translates to: GKYINYRPTRWVPRCHLLSPCLS*KCTIWQ
Trigger: TTGCCAAATTGTGCACTTGCAGGAAAGACATGGTGA...CAGCAGGTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR GCA 90 bp TTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCGTTGCATTATACTCTTaGTCAGCTGCGAAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: LVTKLWKPDLPLSETHPVVALYS*SAAKLG
Trigger: CCCTAACTTCGCAGCTGAGCAAGAGTATAATGCAAC...GACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTGTTGCATTATACTCTTaGTCAGCTGCGAAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVVALYS*SAAKLG
Trigger: CCCTAACTTCGCAGCTGAGCAAGAGTATAATGCAAC...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp TTCTGCTCCACCTGCATCCTGCTAGCAGATGACTCTTCTTCTGAAGATGCTTCTCATCCTGGCCACTGTTaGATTATACTCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FCSTCILLADDSSSEDASHPGHC*IILLLS
Trigger: GCTGAGCAAGAGTATAATGCAACAGTGGCCAGGATG...AGAAGCATCTTCAGAAGAAGAGTCATCTGCTAGCAGGATGCAGGTGGAGCAGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp GTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACTCCACGCATTTCTTTTaGACCGGGCACACAGCCATC +
Preference number: 4 (lower is better)
Translates to: VFLVTKLWKPDLPLSETHSTHFF*TGHTAI
Trigger: GATGGCTGTGTGCCCGGTGCAAAAGAAATGCGTGGA...GTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp AATGACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCCACCTCCTCTCAAATTaGAGAGACAGCATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: NDLSSHSMCDNMSFSNRSHLLSN*RDSILL
Trigger: CAGCAGAATGCTGTCTCTGCAATTTGAGAGGAGGTG...GGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp TGGAGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCCTACCTCTTATAAGATaGCGAAGTTTGACTCCATGT +
Preference number: 4 (lower is better)
Translates to: WRPAKWMAPTLRGFVLSLLPLIR*RSLTPC
Trigger: ACATGGAGTCAAACTTCGGCATCTTATAAGAGGTAG...GAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTAGGAAGAGAAGACAGTaGCCTCCGGCCCAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIRKRRQ*PPAQGD
Trigger: ATCTCCCTGGGCCGGAGGCCACTGTCTTCTCTTCCT...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAAGCAAGACCCGCACGATaGGCTCCTTTAGACTCCATG +
Preference number: 4 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNEARPAR*APLDSM
Trigger: CATGGAGTCTAAAGGAGCCCATCGTGCGGGTCTTGC...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp GTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACTTCAGGGGTGGATGCTaGAGTAGGCTTCGTGTGATC +
Preference number: 4 (lower is better)
Translates to: VFLVTKLWKPDLPLSETHFRGGC*SRLRVI
Trigger: GATCACACGAAGCCTACTCCAGCATCCACCCCTGAA...GTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTTTCAGGGGTGGATGCTaGAGTAGGCTTCGTGTGATC +
Preference number: 4 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPFRGGC*SRLRVI
Trigger: GATCACACGAAGCCTACTCCAGCATCCACCCCTGAA...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp GGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACCTGCTGATAGCCACTAGACAATaGAATGGAATCATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GKYINYRPTRWVPRCHLLIATRQ*NGIISL
Trigger: GAGGCTGATGATTCCATTCCATTGTCTAGTGGCTAT...CAGCAGGTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTCCACTGGGGACCGCTaGGATTTCCCCAGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHISTGDR*DFPRFK
Trigger: CTTGAACCTGGGGAAATCCCAGCGGTCCCCAGTGGA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp GTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACGGCCTGCTAAGTGGATaGCGCCAACTCTTAGAGGTT +
Preference number: 4 (lower is better)
Translates to: VFLVTKLWKPDLPLSETHGLLSG*RQLLEV
Trigger: AACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCC...GTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTCATCGGAGATCTTGCTaGAGGCCTGCTAAGTGGATG +
Preference number: 4 (lower is better)
Translates to: YCRCCILNANDLSSHSMCHRRSC*RPAKWM
Trigger: CATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATG...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp CTGATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTAGTGTGGCTTCATCCTaGCCACTGTTGCATTATACT +
Preference number: 4 (lower is better)
Translates to: LMSMTQVTLAMKARMGLISVASS*PLLHYT
Trigger: AGTATAATGCAACAGTGGCCAGGATGAAGCCACACT...AATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCAGTGTGGCTTCATCCTaGCCACTGTTGCATTATACT +
Preference number: 4 (lower is better)
Translates to: GFRLTDIEWILLDSSLWASVASS*PLLHYT
Trigger: AGTATAATGCAACAGTGGCCAGGATGAAGCCACACT...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTCTGCTATCTGGCTTGTaGTACGGCATGAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: YCRCCILNANDLSSHSMCLLSGL*YGMSRV
Trigger: CACTCTGCTCATGCCGTACCACAAGCCAGATAGCAG...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTTCATTGCTGCTATCTaGCTTGTGGTACGGCATGAG +
Preference number: 4 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLFIAAI*LVVRHE
Trigger: CTCATGCCGTACCACAAGCCAGATAGCAGCAATGAA...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AGCTGCGAAGTTAGGGGACTTCGTCTGCCAAAGGTGGATGAGAGGTTTCGCCCAAATAAAACACATCTCTaGTATGAGGGGCTTAGTCTT +
Preference number: 4 (lower is better)
Translates to: SCEVRGLRLPKVDERFRPNKTHL*YEGLSL
Trigger: AAGACTAAGCCCCTCATACCAGAGATGTGTTTTATT...TGGGCGAAACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTTCTCCCTCAGCAGGTaGGCCCAGCTTCAGACAGTC +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIFSLSR*AQLQTV
Trigger: GACTGTCTGAAGCTGGGCCCACCTGCTGAGGGAGAA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp CTGTACAAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCTCGGGCCACTTGACTTaGACGACTTCTCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LYKGNTDSTRVNLISIHASGHLT*TTSPSA
Trigger: TGCTGAGGGAGAAGTCGTCCAAGTCAAGTGGCCCGA...GGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTTGTACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATTGTTCCGCACTAGGTaGCAGCTGTTCGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRLFRTR*QLFAAH
Trigger: GTGCGCAGCGAACAGCTGTCACCTAGTGCGGAACAA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAACCTGTGACCATCTGCTaGATTGGTGCTGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNEPVTIC*IGAGMS
Trigger: GCTCATTCCAGCACCAATTCAGCAGATGGTCACAGG...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp ACCTCAGGATGCATCCAAATCATTAACCTGATGCACCTTGGAAAGCTTTTGATTGTCCTGACTGCCCTGTaGCCATCTGCTGAATTGGTG +
Preference number: 4 (lower is better)
Translates to: TSGCIQIINLMHLGKLLIVLTAL*PSAELV
Trigger: CACCAATTCAGCAGATGGTCACAGGGCAGTCAGGAC...AATCAAAAGCTTTCCAAGGTGCATCAGGTTAATGATTTGGATGCATCCTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp TCACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGACTGAGTGAACAGTCCTaGCTGCCCTGTGACCATCTG +
Preference number: 4 (lower is better)
Translates to: SPKLKIRSVALLCSKKEGLSEQS*LPCDHL
Trigger: CAGATGGTCACAGGGCAGTCAGGACTGTTCACTCAG...TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTGTTGGCCAGCTGCCTaGACTCCTTCACAGTCATCG +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHICWPAA*TPSQSS
Trigger: CGATGACTGTGAAGGAGTTCAGGCAGCTGGCCAACA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp TTCTGCTCCACCTGCATCCTGCTAGCAGATGACTCTTCTTCTGAAGATGCTTCTCATCCAAGACTGTATTaGGGCGAGCTATGTTCCATT +
Preference number: 4 (lower is better)
Translates to: FCSTCILLADDSSSEDASHPRLY*GELCSI
Trigger: AATGGAACATAGCTCGCCTCAATACAGTCTTGGATG...AGAAGCATCTTCAGAAGAAGAGTCATCTGCTAGCAGGATGCAGGTGGAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp AGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTGATGGAGTAGGCTTCGTGTaGTCAATGGTGTATATATCC +
Preference number: 4 (lower is better)
Translates to: RLTDIEWILLDSSLWACDGVGFV*SMVYIS
Trigger: GGATATATACACCATTGATCACACGAAGCCTACTCC...ATCACAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGAGGTCATCTGTGACTaGGTCGGGGTTAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHREVICD*VGVRDL
Trigger: GAGGTCCCTAACCCCGACTCAGTCACAGATGACCTC...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp CATCTAGCATCATTTTCTTCATTGCTGCTATCTGGCTTGTGGTACGGCATGAGCCTTCACTGCTGCTTCTaGCTTTTCACTGACCTTGAG +
Preference number: 4 (lower is better)
Translates to: HLASFSSLLLSGLWYGMSLHCCF*LFTDLE
Trigger: CTCAAGGTCAGTGAAAAGTCAGAAGCAGCAGTGAAG...GCTCATGCCGTACCACAAGCCAGATAGCAGCAATGAAGAAAATGATGCTAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGCTATACTGGGGACTTTaGAGCTATTTCTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLLYWGL*SYFSLH
Trigger: GTGGAGAGAGAAATAGCTTCAAAGTCCCCAGTATAG...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATGCCATCGGGCCACTTaGCTTGGACGACTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRCHRAT*LGRLLP
Trigger: AGGGAGAAGTCGTCCAAGTCAAGTGGCCCGATGGCA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp GGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACCTGCTGGTGAGAGTCCTTCCCTaGCTGTGGAAAATATATAAA +
Preference number: 4 (lower is better)
Translates to: GKYINYRPTRWVPRCHLLVRVLP*LWKIYK
Trigger: TTTATATATTTTCCACAGTCAGGGAAGGACTCTCAC...CAGCAGGTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp GACTGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACATCTTTCTGAAACGGTaGAGGGCTGATGGTAAACAA +
Preference number: 4 (lower is better)
Translates to: DCGKYINYRPTRWVPRCHIFLKR*RADGKQ
Trigger: TTGTTTACCATCAGCCCTTCACCGTTTCAGAAAGAT...GTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428870.6
CDS-3UTR TCA 90 bp GAAAATGACAGATACAAAAGGGAAAGTCCAGGGTCTGACTCAATCAGGAGCTCAATGAGAAACAGCATCTaGAACAGTGGCGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: ENDRYKRESPGSDSIRSSMRNSI*NSGGGD
Trigger: ATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCAT...TGAGCTCCTGATTGAGTCAGACCCTGGACTTTCCCTTTTGTATCTGTCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTGATTGCTCCCATGGAGAATaGGAAACAGCATCTGAAACA +
Preference number: 4 (lower is better)
Translates to: RLTDIEWILLDSSLWACDCSHGE*ETASET
Trigger: TGTTTCAGATGCTGTTTCTCATTCTCCATGGGAGCA...ATCACAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTCCAATGACAATTTTTaGGGCTGTAGTAGGACACGT +
Preference number: 4 (lower is better)
Translates to: GFRLTDIEWILLDSSLWASNDNF*GCSRTR
Trigger: ACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGA...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp ACTGCTTCTGCTTTAAGGTGTCAGTATGATGCATCATATTTCCTGTTTTCCAAATGCCCGGCACGCTCTTaGTTTGGGCTCAACTTCCGC +
Preference number: 4 (lower is better)
Translates to: TASALRCQYDASYFLFSKCPARS*FGLNFR
Trigger: GCGGAAGTTGAGCCCAAAGCAAGAGCGTGCCGGGCA...TTTGGAAAACAGGAAATATGATGCATCATACTGACACCTTAAAGCAGAAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR GCA 90 bp AAGCTTTGTCATCCTCAGTTTTTATGTCTTCTGTTACAGATGTACTTAAGCAGCTGCCCGGCACGCTCTTaGTTTGGGCTCAACTTCCGC +
Preference number: 4 (lower is better)
Translates to: KLCHPQFLCLLLQMYLSSCPARS*FGLNFR
Trigger: GCGGAAGTTGAGCCCAAAGCAAGAGCGTGCCGGGCA...GCTGCTTAAGTACATCTGTAACAGAAGACATAAAAACTGAGGATGACAAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp GGCATCTTTAATTCACCATATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCAGGAGGAATCACCTTTaGAAGACCCGCACGATGGGC +
Preference number: 4 (lower is better)
Translates to: GIFNSPYCRCCILNANDLRRNHL*KTRTMG
Trigger: GCCCATCGTGCGGGTCTTGCAAAGGTGATTCCTCCT...GAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp CCACTTCCTCCTCAATGGACAGAACCTCAGGCAATTCTTCATCACTTGGCGCCTCATCTGCTGAATTGGTaGTGGAATGAGCAAATTATC +
Preference number: 4 (lower is better)
Translates to: PLPPQWTEPQAILHHLAPHLLNW*WNEQII
Trigger: GATAATTTGCTCATTCCAGCACCAATTCAGCAGATG...AGGCGCCAAGTGATGAAGAATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp AATGACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGCTCCCATTAATATCTaGACCATAGATAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: NDLSSHSMCDNMSFSNRSAPINI*TIDRCH
Trigger: GTGGCACCTATCTATGGTGCAGATATTAATGGGAGC...GGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATACTTCAGGGGTGGATaGTGGAGTAGGCTTCGTGTG +
Preference number: 4 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNEYFRGG*WSRLRV
Trigger: CACACGAAGCCTACTCCAGCATCCACCCCTGAAGTA...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp TCATCTTCTCTCTTCCAACCCAAGCTGCTCTGTGGCCTGCAGCGATGTATGCAGAGGTACACTTCTATATaGATAAGCTTTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SSSLFQPKLLCGLQRCMQRYTSI*ISFVIL
Trigger: GAGGATGACAAAGCTTATGCATATAGAAGTGTACCT...CTGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGAGAGAAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CTGTACAAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCAGTCATCGGAGATCTTaGTGGAGGCCTGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: LYKGNTDSTRVNLISIHASHRRS*WRPAKW
Trigger: CCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACT...GGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTTGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAAAGTCATCGGAGATCTTaGTGGAGGCCTGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNESHRRS*WRPAKW
Trigger: CCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACT...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTTCATCACTTGGCGCCTaGTGCTTCACAAGAGTCATC +
Preference number: 4 (lower is better)
Translates to: YCRCCILNANDLSSHSMCSSLGA*CFTRVI
Trigger: GATGACTCTTGTGAAGCAGCAGGCGCCAAGTGATGA...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTTTAGGGGACTTCGTCTaGCAAAGGTGGATGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPLGDFV*QRWMRG
Trigger: ACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAA...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp CTGTTTCTTCCACTTCCTCCTCAATGGACAGAACCTCAGGCAATTCTTCATCACATACTCTTGCTCAGCTaGGAAGTTAGGGGACTTCGT +
Preference number: 4 (lower is better)
Translates to: LFLPLPPQWTEPQAILHHILLLS*EVRGLR
Trigger: ACGAAGTCCCCTAACTTCGCAGCTGAGCAAGAGTAT...GTGATGAAGAATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGGAAGAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCCATTTTCTTCATTGCTaGTATCTGGCTTGTGGTACG +
Preference number: 4 (lower is better)
Translates to: GFRLTDIEWILLDSSLWAHFLHC*YLACGT
Trigger: CGTACCACAAGCCAGATAGCAGCAATGAAGAAAATG...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTCATTTTCTTCATTGCTaGTATCTGGCTTGTGGTACG +
Preference number: 4 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVHFLHC*YLACGT
Trigger: CGTACCACAAGCCAGATAGCAGCAATGAAGAAAATG...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp TCATCTTCTCTCTTCCAACCCAAGCTGCTCTGTGGCCTGCAGCGATGTATGCAGATCATAGAAGACAACTaGTCACAAGTGAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: SSSLFQPKLLCGLQRCMQIIEDN*SQVKAR
Trigger: TCTTGCTTTCACTTGTGAGCAGTTGTCTTCTATGAT...CTGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGAGAGAAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGGCACGCTCTTGCTTTaGGCTCAACTTCCGCGCTGT +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRGTLLL*AQLPRC
Trigger: ACAGCGCGGAAGTTGAGCCCAAAGCAAGAGCGTGCC...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp CTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAACACTTGGCACGCTCTTGCTTTaGGCTCAACTTCCGCGCTGT +
Preference number: 4 (lower is better)
Translates to: LLSFEELWITQKHNKRTLGTLLL*AQLPRC
Trigger: ACAGCGCGGAAGTTGAGCCCAAAGCAAGAGCGTGCC...AAGTGTTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp CCTACTGATGAATATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGAGGAAGAGAAGACAGTaGCCTCCGGCCCAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: PTDEYFLLSFEELWITQKRKRRQ*PPAQGD
Trigger: ATCTCCCTGGGCCGGAGGCCACTGTCTTCTCTTCCT...CTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTGAGAGCACGACTCGGTaGAGGAGGAAGAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIESTTR*RRKRRQ
Trigger: CTGTCTTCTCTTCCTCCTCCACCGAGTCGTGCTCTC...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp GGCATCTTTAATTCACCATATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCGAGAGCACGACTCGGTaGAGGAGGAAGAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: GIFNSPYCRCCILNANDLESTTR*RRKRRQ
Trigger: CTGTCTTCTCTTCCTCCTCCACCGAGTCGTGCTCTC...GAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543771.5
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTGCAAGACCCGCACGATaGGCTCCTTTAGACTCCATG +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIARPAR*APLDSM
Trigger: CATGGAGTCTAAAGGAGCCCATCGTGCGGGTCTTGC...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp GCGTCCAATTCATTGGGTGTATTTTGTATTTTTGGTGACCAAACTCTGGAAACCGCAAGACCCGCACGATaGGCTCCTTTAGACTCCATG +
Preference number: 4 (lower is better)
Translates to: ASNSLGVFCIFGDQTLETARPAR*APLDSM
Trigger: CATGGAGTCTAAAGGAGCCCATCGTGCGGGTCTTGC...GGTTTCCAGAGTTTGGTCACCAAAAATACAAAATACACCCAATGAATTGGACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CCA 90 bp GGCATCTTTAATTCACCATATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCGCAAGACCCGCACGATaGGCTCCTTTAGACTCCATG +
Preference number: 4 (lower is better)
Translates to: GIFNSPYCRCCILNANDLARPAR*APLDSM
Trigger: CATGGAGTCTAAAGGAGCCCATCGTGCGGGTCTTGC...GAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp TTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTATCATAGCACTGTCTTaGCTTCCACTCCTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: FLVTKLWKPDLPLSETHPIIALS*LPLLRR
Trigger: CCTCCTAAGGAGTGGAAGCCAAGACAGTGCTATGAT...AGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CCA 90 bp AACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCGACCATCTGCTGAATTaGTGCTGGAATGAGCAAATT +
Preference number: 4 (lower is better)
Translates to: NPIYHCQRHTLSPMPAKLDHLLN*CWNEQI
Trigger: AATTTGCTCATTCCAGCACCAATTCAGCAGATGGTC...GAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CCA 90 bp CTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCAAGCTGATATCTGTCTaGCTGAAATTTCCTCACAAA +
Preference number: 4 (lower is better)
Translates to: LWKPDLPLSETHPVTYASKLISV*LKFPHK
Trigger: TTTGTGAGGAAATTTCAGCCAGACAGATATCAGCTT...GCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CTCCTGGTGTGTATTCTGAACTCAGGATTGGATACTGCCTCCTTCCAGCGCTGGGCTTCGTGTGATCAATaGTGTATATATCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LLVCILNSGLDTASFQRWASCDQ*CIYPFL
Trigger: AAGGAAAGGATATATACACCATTGATCACACGAAGC...CCAGCGCTGGAAGGAGGCAGTATCCAATCCTGAGTTCAGAATACACACCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp AAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATTGATGTATTTCTCTCTCCACTaGGGACCGCTGGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: KQHLKQWRRGCNFPNELMYFSLH*GPLGFP
Trigger: GGGAAATCCCAGCGGTCCCCAGTGGAGAGAGAAATA...CATCAATTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAAGGCCTGCTAAGTGGATaGCGCCAACTCTTAGAGGTT +
Preference number: 4 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNEGLLSG*RQLLEV
Trigger: AACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCC...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATTGATGTGGAGGCCTGCTAAGTaGATGGCGCCAACTCTTAGA +
Preference number: 4 (lower is better)
Translates to: KQHLKQWRRGCNFPNELMWRPAK*MAPTLR
Trigger: TCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCA...CATCAATTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp TGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTGATCAATTCTTCATCACTTaGCGCCTGCTGCTTCACAAG +
Preference number: 4 (lower is better)
Translates to: CRCCILNANDLSSHSMCDQFFIT*RLLLHK
Trigger: CTTGTGAAGCAGCAGGCGCCAAGTGATGAAGAATTG...ATCACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTTTCGTCTGCCAAAGGTaGATGAGAGGTTTCGCCCAA +
Preference number: 4 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPFVCQR*MRGFAQ
Trigger: TTGGGCGAAACCTCTCATCCACCTTTGGCAGACGAA...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp TCACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGAGCAGATGGCACAGTGTaGCTTCATCCTGGCCACTGT +
Preference number: 4 (lower is better)
Translates to: SPKLKIRSVALLCSKKEGADGTV*LHPGHC
Trigger: ACAGTGGCCAGGATGAAGCCACACTGTGCCATCTGC...TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTACGGCGCACATGACATaGGCCCACTTATTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: YCRCCILNANDLSSHSMCTAHMT*AHLLFF
Trigger: GAAGAACAATAAGTGGGCCCATGTCATGTGCGCCGT...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAAAGTGAATCGAACTTCTaGGACCGCAACGGCGCACAT +
Preference number: 4 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNESESNF*DRNGAH
Trigger: ATGTGCGCCGTTGCGGTCCCAGAAGTTCGATTCACT...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp CTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCTATTTGTGTCCTTTCTaGGACATTAGTGAATCGAAC +
Preference number: 4 (lower is better)
Translates to: LWKPDLPLSETHPVTYASYLCPF*DISESN
Trigger: GTTCGATTCACTAATGTCCCAGAAAGGACACAAATA...GCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp TACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGTCAACCTGGTACATGTaGGCAATATTTGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: YHCQRHTLSPMPAKLTAQSTWYM*AIFDPK
Trigger: TTTTGGATCAAATATTGCCCACATGTACCAGGTTGA...CTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTGGCAGGTCCCCAAGTaGCATCTGCCAGCACTTACA +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIWQVPK*HLPALT
Trigger: TGTAAGTGCTGGCAGATGCCACTTGGGGACCTGCCA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp TGTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCTCCTCTGTGGCAGTaGCTTTTCCTTGTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: CIFGDQTLETRFTTVRDTPPLWQ*LFLVGD
Trigger: ATCACCCACAAGGAAAAGCCACTGCCACAGAGGAGG...TGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGGGGGCCCGCACTTGGTaGGTCACGTGGGCTTACAAA +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALGARTW*VTWAYK
Trigger: TTTGTAAGCCCACGTGACTCACCAAGTGCGGGCCCC...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp AGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGAATTATGGATCTTGTTCCGCACTAGGTaGCAGCTGTTCGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: SRNPTDEYFLLSFEELWILFRTR*QLFAAH
Trigger: GTGCGCAGCGAACAGCTGTCACCTAGTGCGGAACAA...GATCCATAATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR TCA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTATGCAAGGTATTTGTTaGACTCCCGGAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPMQGIC*TPGTPP
Trigger: TGGAGGAGTTCCGGGAGTTCAACAAATACCTTGCAT...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCCTGTGACCATCTGCTaGATTGGTGCTGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIPVTIC*IGAGMS
Trigger: GCTCATTCCAGCACCAATTCAGCAGATGGTCACAGG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGTCCTGACTGCCCTGTaGCCATCTGCTGAATTGGTG +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRVLTAL*PSAELV
Trigger: CACCAATTCAGCAGATGGTCACAGGGCAGTCAGGAC...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp ATACCAGCAGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGAATGTCCTGACTGCCCTGTaGCCATCTGCTGAATTGGTG +
Preference number: 4 (lower is better)
Translates to: IPAAEILLMNISCCPLRNVLTAL*PSAELV
Trigger: CACCAATTCAGCAGATGGTCACAGGGCAGTCAGGAC...ATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCTGCTGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR TCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGACTGAGTGAACAGTCCTaGCTGCCCTGTGACCATCTG +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRLSEQS*LPCDHL
Trigger: CAGATGGTCACAGGGCAGTCAGGACTGTTCACTCAG...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp CCTACTGATGAATATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCTGAGTGAACAGTCCTaGCTGCCCTGTGACCATCTG +
Preference number: 4 (lower is better)
Translates to: PTDEYFLLSFEELWITQKLSEQS*LPCDHL
Trigger: CAGATGGTCACAGGGCAGTCAGGACTGTTCACTCAG...CTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR TCA 90 bp CCTACTGATGAATATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGTGTTGGCCAGCTGCCTaGACTCCTTCACAGTCATCG +
Preference number: 4 (lower is better)
Translates to: PTDEYFLLSFEELWITQKCWPAA*TPSQSS
Trigger: CGATGACTGTGAAGGAGTTCAGGCAGCTGGCCAACA...CTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR TCA 90 bp GACTGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACCCTGAGAGTTTGATATaGTCTGATAAATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DCGKYINYRPTRWVPRCHPESLI*SDKFCS
Trigger: GGAGCAGAATTTATCAGATCATATCAAACTCTCAGG...GTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp GGCATCTTTAATTCACCATATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTGCCAAAGGTGGATaGGAGGTTTCGCCCAAGACT +
Preference number: 4 (lower is better)
Translates to: GIFNSPYCRCCILNANDLSAKGG*EVSPKT
Trigger: AGTCTTGGGCGAAACCTCTCATCCACCTTTGGCAGA...GAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp CTGTACAAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCTTCGTGATGACCGTTTaGCCCACGGAAATGACCTTC +
Preference number: 4 (lower is better)
Translates to: LYKGNTDSTRVNLISIHAFVMTV*PTEMTF
Trigger: GAAGGTCATTTCCGTGGGTCAAACGGTCATCACGAA...GGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTTGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp TTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCGTGAGAGTCCTTCCCTaGCTGTGGAAAATATATAAA +
Preference number: 4 (lower is better)
Translates to: LVTKLWKPDLPLSETHPVVRVLP*LWKIYK
Trigger: TTTATATATTTTCCACAGTCAGGGAAGGACTCTCAC...GACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp TTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCTTTGAAACAAATAAGTaGGAGTCCTTCCCTGACTGT +
Preference number: 4 (lower is better)
Translates to: LVTKLWKPDLPLSETHPVFETNK*ESFPDC
Trigger: ACAGTCAGGGAAGGACTCTCACTTATTTGTTTCAAA...GACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp TTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAAATCACGGAAAGTCCAGGGTCTaGCTCAATCAGGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LIPMTIFEAVVGHVGLNHGKSRV*LNQELR
Trigger: CCTGAGCTCCTGATTGAGTCAGACCCTGGACTTTCC...GTGATTTAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp TGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTGATGTAGGTGTTGCATCTTaGATGCCAATGACCTCTCTT +
Preference number: 4 (lower is better)
Translates to: CRCCILNANDLSSHSMCDVGVAS*MPMTSL
Trigger: AAGAGAGGTCATTGGCATTCAAGATGCAACACCTAC...ATCACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGTGCCCGGCACGCTCTTaGTTTGGGCTCAACTTCCGC +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALCPARS*FGLNFR
Trigger: GCGGAAGTTGAGCCCAAAGCAAGAGCGTGCCGGGCA...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp CTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAACACTTAGGAGGAATCACCTTTaGAAGACCCGCACGATGGGC +
Preference number: 4 (lower is better)
Translates to: LLSFEELWITQKHNKRTLRRNHL*KTRTMG
Trigger: GCCCATCGTGCGGGTCTTGCAAAGGTGATTCCTCCT...AAGTGTTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR GCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTACTTCAGGGGTGGATaGTGGAGTAGGCTTCGTGTG +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIYFRGG*WSRLRV
Trigger: CACACGAAGCCTACTCCAGCATCCACCCCTGAAGTA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp TTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTCTGGAAGCTTCGGGATaGTTTTCTTACTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FLVTKLWKPDLPLSETHPLEASG*FSYFPP
Trigger: AGGAGGAAAGTAAGAAAAGCATCCCGAAGCTTCCAG...AGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GAAAATGACAGATACAAAAGGGAAAGTCCAGGGTCTGACTCAATCAGGAGCTCAAAATTCTGCTCCACCTaGATCCTGCTAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: ENDRYKRESPGSDSIRSSKFCST*ILLADD
Trigger: GTCATCTGCTAGCAGGATGCAGGTGGAGCAGAATTT...TGAGCTCCTGATTGAGTCAGACCCTGGACTTTCCCTTTTGTATCTGTCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTCACTTGGCGCCTGCTaGTTCACAAGAGTCATCGGA +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHISLGAC*FTRVIG
Trigger: TCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTGA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp AAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATTGATGTTAGGGGACTTCGTCTaGCAAAGGTGGATGAGAGGT +
Preference number: 4 (lower is better)
Translates to: KQHLKQWRRGCNFPNELMLGDFV*QRWMRG
Trigger: ACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAA...CATCAATTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTCATCATTTTCTTCATTaGTGCTATCTGGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVHHFLH*CYLACG
Trigger: ACCACAAGCCAGATAGCAGCAATGAAGAAAATGATG...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp AGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTGATAATACCATAACAACTTaGATGAACCCGTACGCAGCA +
Preference number: 4 (lower is better)
Translates to: RLTDIEWILLDSSLWACDNTITT*MNPYAA
Trigger: TGCTGCGTACGGGTTCATGCAAGTTGTTATGGTATT...ATCACAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp CAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCTTATTGTTCTTCGTTTaGTTAAGAGCACCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QTLETRFTTVRDTPCHLCLLFFV*LRAPPL
Trigger: GAGAGGAGGTGCTCTTAAGCAAACGAAGAACAATAA...GCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTTTATTGTTCTTCGTTTaGTTAAGAGCACCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVLLFFV*LRAPPL
Trigger: GAGAGGAGGTGCTCTTAAGCAAACGAAGAACAATAA...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp AACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCATGATTTCAGATTGCTaGGTCCAATTCATTGGGTGT +
Preference number: 4 (lower is better)
Translates to: NPIYHCQRHTLSPMPAKLMISDC*VQFIGC
Trigger: ACACCCAATGAATTGGACGCAGCAATCTGAAATCAT...GAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CATTGCGGTAAACTACAGGGGGAAATATCAACACCTGAGTTAGTTCTGCACCTCCACTTTGACGATCATTaGGGTAAACTACAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: HCGKLQGEISTPELVLHLHFDDH*GKLQGE
Trigger: TTCCCCCTGTAGTTTACCGCAATGATCGTCAAAGTG...GAGGTGCAGAACTAACTCAGGTGTTGATATTTCCCCCTGTAGTTTACCGCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp TGGAATGGAATCATCAGCCTCACTGGATATAGAAGGTACACTTCTATATGCATACTCAGGATTGGATACTaGCTCCTTCCAGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: WNGIISLTGYRRYTSICILRIGY*LLPALA
Trigger: AGCCAGCGCTGGAAGGAGGCAGTATCCAATCCTGAG...TATGCATATAGAAGTGTACCTTCTATATCCAGTGAGGCTGATGATTCCATTCCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp CTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCTGCTATAAATGCCAATAGTCCATaGAACAGATCTGACAGGTTC +
Preference number: 4 (lower is better)
Translates to: LLSGWRQLLEVLFSPSAINANSP*NRSDRF
Trigger: GAACCTGTCAGATCTGTTGCATGGACTATTGGCATT...TATAGCAGAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp TCACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGAGGCAGTGTCTGCAGCTaGTTCTTCAGTCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SPKLKIRSVALLCSKKEGGSVCS*FFSPLP
Trigger: TGGAAGAGGACTGAAGAAGCAGCTGCAGACACTGCC...TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536108.5
CDS-3UTR GCA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGGAGACAACCTCAGGATaGATCCAAATCATTAACCTG +
Preference number: 4 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLETTSG*IQIINL
Trigger: CAGGTTAATGATTTGGATGCATCCTGAGGTTGTCTC...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGATTATAATGCCTCCATaGTACAGGAGACAACCTCAG +
Preference number: 4 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLIIMPP*YRRQPQ
Trigger: CTGAGGTTGTCTCCTGTAGCATGGAGGCATTATAAT...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AAAATACCAGCAGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGGAGAGCACGACTCGGTaGAGGAGGAAGAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: KIPAAEILLMNISCCPLRESTTR*RRKRRQ
Trigger: CTGTCTTCTCTTCCTCCTCCACCGAGTCGTGCTCTC...CCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCTGCTGGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp CCACTTCCTCCTCAATGGACAGAACCTCAGGCAATTCTTCATCACTTGGCGCCTCTGCTGAATTGGTGCTaGAATGAGCAAATTATCAAT +
Preference number: 4 (lower is better)
Translates to: PLPPQWTEPQAILHHLAPLLNWC*NEQIIN
Trigger: ATTGATAATTTGCTCATTCCAGCACCAATTCAGCAG...AGGCGCCAAGTGATGAAGAATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp AGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTGATGACCATCTGCTGAATTaGTGCTGGAATGAGCAAATT +
Preference number: 4 (lower is better)
Translates to: RLTDIEWILLDSSLWACDDHLLN*CWNEQI
Trigger: AATTTGCTCATTCCAGCACCAATTCAGCAGATGGTC...ATCACAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp CATCTAGCATCATTTTCTTCATTGCTGCTATCTGGCTTGTGGTACGGCATGAGCAATTCTCCAGCCTCCTaGGTTATCTTGTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: HLASFSSLLLSGLWYGMSNSPAS*VILSKG
Trigger: TCCCTTTGACAAGATAACCCAGGAGGCTGGAGAATT...GCTCATGCCGTACCACAAGCCAGATAGCAGCAATGAAGAAAATGATGCTAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTATTTCTCTCTCCACTaGGGACCGCTGGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIYFSLH*GPLGFP
Trigger: GGGAAATCCCAGCGGTCCCCAGTGGAGAGAGAAATA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp TCACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGAGGCCTGCTAAGTGGATaGCGCCAACTCTTAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SPKLKIRSVALLCSKKEGGLLSG*RQLLEV
Trigger: AACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCC...TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTGGAGGCCTGCTAAGTaGATGGCGCCAACTCTTAGA +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIWRPAK*MAPTLR
Trigger: TCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp TCACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGATGGAGGCCTGCTAAGTaGATGGCGCCAACTCTTAGA +
Preference number: 4 (lower is better)
Translates to: SPKLKIRSVALLCSKKEGWRPAK*MAPTLR
Trigger: TCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCA...TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp CACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGATCATCGGAGATCTTGCTaGAGGCCTGCTAAGTGGATG +
Preference number: 4 (lower is better)
Translates to: HLNSKYVQLLCCAARRKDHRRSC*RPAKWM
Trigger: CATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATG...ATCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp GATAAATTCTGCTCCACCTGCATCCTGCTAGCAGATGACTCTTCTTCTGAAGATCCACTTCCTCCTCAATaGACAGAACCTCAGGCAATT +
Preference number: 4 (lower is better)
Translates to: DKFCSTCILLADDSSSEDPLPPQ*TEPQAI
Trigger: AATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGG...ATCTTCAGAAGAAGAGTCATCTGCTAGCAGGATGCAGGTGGAGCAGAATTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp TTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTAGTGTGGCTTCATCCTaGCCACTGTTGCATTATACT +
Preference number: 4 (lower is better)
Translates to: FLVTKLWKPDLPLSETHPSVASS*PLLHYT
Trigger: AGTATAATGCAACAGTGGCCAGGATGAAGCCACACT...AGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCAGATGGCACAGTGTaGCTTCATCCTGGCCACTGT +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRADGTV*LHPGHC
Trigger: ACAGTGGCCAGGATGAAGCCACACTGTGCCATCTGC...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp GCGTCCAATTCATTGGGTGTATTTTGTATTTTTGGTGACCAAACTCTGGAAACCCTGCTATCTGGCTTGTaGTACGGCATGAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: ASNSLGVFCIFGDQTLETLLSGL*YGMSRV
Trigger: CACTCTGCTCATGCCGTACCACAAGCCAGATAGCAG...GGTTTCCAGAGTTTGGTCACCAAAAATACAAAATACACCCAATGAATTGGACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGATCTGCTATCTGGCTTGTaGTACGGCATGAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: HLNSKYVQLLCCAARRKDLLSGL*YGMSRV
Trigger: CACTCTGCTCATGCCGTACCACAAGCCAGATAGCAG...ATCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp GGAAATAAGGAGACTTGTTCCATCCTCTTCAAGGAAGGCATTGGGTGGAGAATATTCATTGCTGCTATCTaGCTTGTGGTACGGCATGAG +
Preference number: 4 (lower is better)
Translates to: GNKETCSILFKEGIGWRIFIAAI*LVVRHE
Trigger: CTCATGCCGTACCACAAGCCAGATAGCAGCAATGAA...TATTCTCCACCCAATGCCTTCCTTGAAGAGGATGGAACAAGTCTCCTTATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp GGCATCTTTAATTCACCATATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCAGTGAATCGAACTTCTaGGACCGCAACGGCGCACAT +
Preference number: 4 (lower is better)
Translates to: GIFNSPYCRCCILNANDLSESNF*DRNGAH
Trigger: ATGTGCGCCGTTGCGGTCCCAGAAGTTCGATTCACT...GAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp GGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACCTGCTGTATTTGTGTCCTTTCTaGGACATTAGTGAATCGAAC +
Preference number: 4 (lower is better)
Translates to: GKYINYRPTRWVPRCHLLYLCPF*DISESN
Trigger: GTTCGATTCACTAATGTCCCAGAAAGGACACAAATA...CAGCAGGTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATCGGGCCACTTGACTTaGACGACTTCTCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRSGHLT*TTSPSA
Trigger: TGCTGAGGGAGAAGTCGTCCAAGTCAAGTGGCCCGA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp TTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGACTACTGTCTCTTCTaGCACTTCTTCTGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: FLVTKLWKPDLPLSETHPDYCLF*HFFWKE
Trigger: CTCTTTCCAGAAGAAGTGCCAGAAGAGACAGTAGTC...AGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp TCATCTTCTCTCTTCCAACCCAAGCTGCTCTGTGGCCTGCAGCGATGTATGCAGCTTAGAAAACTTCTTTaGGATCATAGAAGACAACTG +
Preference number: 4 (lower is better)
Translates to: SSSLFQPKLLCGLQRCMQLRKLL*DHRRQL
Trigger: CAGTTGTCTTCTATGATCCCAAAGAAGTTTTCTAAG...CTGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGAGAGAAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCCTCCATGGAGGGTCTaGAGGTCATTATCTTACAGC +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIPPWRV*RSLSYS
Trigger: GCTGTAAGATAATGACCTTCAGACCCTCCATGGAGG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTCATCCAAGACTGTATTaGGGCGAGCTATGTTCCATT +
Preference number: 4 (lower is better)
Translates to: YCRCCILNANDLSSHSMCHPRLY*GELCSI
Trigger: AATGGAACATAGCTCGCCTCAATACAGTCTTGGATG...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp TTCTGCTCCACCTGCATCCTGCTAGCAGATGACTCTTCTTCTGAAGATGCTTCTCCTGAGAGTTTGATATaGTCTGATAAATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FCSTCILLADDSSSEDASPESLI*SDKFCS
Trigger: GGAGCAGAATTTATCAGATCATATCAAACTCTCAGG...AGAAGCATCTTCAGAAGAAGAGTCATCTGCTAGCAGGATGCAGGTGGAGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGCCTGAGAGTTTGATATaGTCTGATAAATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLPESLI*SDKFCS
Trigger: GGAGCAGAATTTATCAGATCATATCAAACTCTCAGG...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTCTATACTGGGGACTTTaGAGCTATTTCTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: YCRCCILNANDLSSHSMCLYWGL*SYFSLH
Trigger: GTGGAGAGAGAAATAGCTTCAAAGTCCCCAGTATAG...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATCTGCCAAAGGTGGATaGGAGGTTTCGCCCAAGACT +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRSAKGG*EVSPKT
Trigger: AGTCTTGGGCGAAACCTCTCATCCACCTTTGGCAGA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCCGCAACGGCGCACATaGCATGGGCCCACTTATTGT +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALPQRRT*HGPTYC
Trigger: ACAATAAGTGGGCCCATGTCATGTGCGCCGTTGCGG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp TCACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGAGCATGTGTGATAACATaGGCTTCAGCAACAGGTCCG +
Preference number: 4 (lower is better)
Translates to: SPKLKIRSVALLCSKKEGACVIT*ASATGP
Trigger: CGGACCTGTTGCTGAAGCTCATGTTATCACACATGC...TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp AGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTGATCATCTGCTGAATTGGTaGTGGAATGAGCAAATTATC +
Preference number: 4 (lower is better)
Translates to: RLTDIEWILLDSSLWACDHLLNW*WNEQII
Trigger: GATAATTTGCTCATTCCAGCACCAATTCAGCAGATG...ATCACAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTGCTCCCATTAATATCTaGACCATAGATAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: YCRCCILNANDLSSHSMCAPINI*TIDRCH
Trigger: GTGGCACCTATCTATGGTGCAGATATTAATGGGAGC...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp GAAAATGACAGATACAAAAGGGAAAGTCCAGGGTCTGACTCAATCAGGAGCTCACTGGAAGCTTCGGGATaGTTTTCTTACTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ENDRYKRESPGSDSIRSSLEASG*FSYFPP
Trigger: AGGAGGAAAGTAAGAAAAGCATCCCGAAGCTTCCAG...TGAGCTCCTGATTGAGTCAGACCCTGGACTTTCCCTTTTGTATCTGTCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTCTGGAAGCTTCGGGATaGTTTTCTTACTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPLEASG*FSYFPP
Trigger: AGGAGGAAAGTAAGAAAAGCATCCCGAAGCTTCCAG...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp CTGTACAAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCAAATTCTGCTCCACCTaGATCCTGCTAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: LYKGNTDSTRVNLISIHAKFCST*ILLADD
Trigger: GTCATCTGCTAGCAGGATGCAGGTGGAGCAGAATTT...GGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTTGTACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTATCACTTGGCGCCTGCTaGTTCACAAGAGTCATCGGA +
Preference number: 4 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLSLGAC*FTRVIG
Trigger: TCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTGA...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTCATCACTTGGCGCCTaGTGCTTCACAAGAGTCATC +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHISSLGA*CFTRVI
Trigger: GATGACTCTTGTGAAGCAGCAGGCGCCAAGTGATGA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp TCACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGATCATCACTTGGCGCCTaGTGCTTCACAAGAGTCATC +
Preference number: 4 (lower is better)
Translates to: SPKLKIRSVALLCSKKEGSSLGA*CFTRVI
Trigger: GATGACTCTTGTGAAGCAGCAGGCGCCAAGTGATGA...TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp GAAAATGACAGATACAAAAGGGAAAGTCCAGGGTCTGACTCAATCAGGAGCTCAGTTGCATTATACTCTTaGTCAGCTGCGAAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: ENDRYKRESPGSDSIRSSVALYS*SAAKLG
Trigger: CCCTAACTTCGCAGCTGAGCAAGAGTATAATGCAAC...TGAGCTCCTGATTGAGTCAGACCCTGGACTTTCCCTTTTGTATCTGTCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp CTGTTTCTTCCACTTCCTCCTCAATGGACAGAACCTCAGGCAATTCTTCATCACCATTTTCTTCATTGCTaGTATCTGGCTTGTGGTACG +
Preference number: 4 (lower is better)
Translates to: LFLPLPPQWTEPQAILHHHFLHC*YLACGT
Trigger: CGTACCACAAGCCAGATAGCAGCAATGAAGAAAATG...GTGATGAAGAATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGGAAGAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp TTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTAATACCATAACAACTTaGATGAACCCGTACGCAGCA +
Preference number: 4 (lower is better)
Translates to: FLVTKLWKPDLPLSETHPNTITT*MNPYAA
Trigger: TGCTGCGTACGGGTTCATGCAAGTTGTTATGGTATT...AGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp AAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTTCCACGCATTTCTTTTaGACCGGGCACACAGCCATC +
Preference number: 4 (lower is better)
Translates to: KGNTDSTRVNLISIHAICSTHFF*TGHTAI
Trigger: GATGGCTGTGTGCCCGGTGCAAAAGAAATGCGTGGA...ACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp AAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATTGATGCACCTCCTCTCAAATTaGAGAGACAGCATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: KQHLKQWRRGCNFPNELMHLLSN*RDSILL
Trigger: CAGCAGAATGCTGTCTCTGCAATTTGAGAGGAGGTG...CATCAATTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTTATTGTTCTTCGTTTaGTTAAGAGCACCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLLLFFV*LRAPPL
Trigger: GAGAGGAGGTGCTCTTAAGCAAACGAAGAACAATAA...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTCCCCAAGTGGCATCTaGCAGCACTTACAAATCGAG +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHISPSGI*QHLQIE
Trigger: CTCGATTTGTAAGTGCTGGCAGATGCCACTTGGGGA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp GTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACTCACCATGTCTTTCCTaGAAGTGCAAGTTCTCCGAA +
Preference number: 4 (lower is better)
Translates to: VFLVTKLWKPDLPLSETHSPCLS*KCKFSE
Trigger: TTCGGAGAACTTGCACTTGCAGGAAAGACATGGTGA...GTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428870.6
CDS-3UTR GCA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGCCATATTGTAGGTGTTaGATCTTGAATGCCAATGAC +
Preference number: 4 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLPYCRC*ILNAND
Trigger: GTCATTGGCATTCAAGATGCAACACCTACAATATGG...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp TTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGAGATTTGGGAAATTTaGGAGACTTGTTCCGCACTA +
Preference number: 4 (lower is better)
Translates to: FLVTKLWKPDLPLSETHPEIWEI*ETCSAL
Trigger: TAGTGCGGAACAAGTCTCCCAAATTTCCCAAATCTC...AGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CCA 90 bp AAGCTTTGTCATCCTCAGTTTTTATGTCTTCTGTTACAGATGTACTTAAGCAGCGAGAGCACGACTCGGTaGAGGAGGAAGAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: KLCHPQFLCLLLQMYLSSESTTR*RRKRRQ
Trigger: CTGTCTTCTCTTCCTCCTCCACCGAGTCGTGCTCTC...GCTGCTTAAGTACATCTGTAACAGAAGACATAAAAACTGAGGATGACAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp ATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAAGCAAGACCCGCACGATaGGCTCCTTTAGACTCCATG +
Preference number: 4 (lower is better)
Translates to: ISCCPLRNYGSPKSTTKEARPAR*APLDSM
Trigger: CATGGAGTCTAAAGGAGCCCATCGTGCGGGTCTTGC...TTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCGCTTCGTGTGATCAATaGTGTATATATCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GFRLTDIEWILLDSSLWAASCDQ*CIYPFL
Trigger: AAGGAAAGGATATATACACCATTGATCACACGAAGC...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp CTGTACAAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCGTAGACCTAGCACACTaGAAGCTTCGGGATGCTTTT +
Preference number: 4 (lower is better)
Translates to: LYKGNTDSTRVNLISIHAVDLAH*KLRDAF
Trigger: AAAAGCATCCCGAAGCTTCCAGTGTGCTAGGTCTAC...GGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTTGTACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp TGTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACAGTAGACCTAGCACACTaGAAGCTTCGGGATGCTTTT +
Preference number: 4 (lower is better)
Translates to: CIFGDQTLETRFTTVRDTVDLAH*KLRDAF
Trigger: AAAAGCATCCCGAAGCTTCCAGTGTGCTAGGTCTAC...TGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGACATCGGAGATCTTGCTaGAGGCCTGCTAAGTGGATG +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRHRRSC*RPAKWM
Trigger: CATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATG...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp TGTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCACTTCCTCCTCAATaGACAGAACCTCAGGCAATT +
Preference number: 4 (lower is better)
Translates to: CIFGDQTLETRFTTVRDTPLPPQ*TEPQAI
Trigger: AATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGG...TGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAACCACTTCCTCCTCAATaGACAGAACCTCAGGCAATT +
Preference number: 4 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNEPLPPQ*TEPQAI
Trigger: AATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGG...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp GAAAATGACAGATACAAAAGGGAAAGTCCAGGGTCTGACTCAATCAGGAGCTCAAGTGTGGCTTCATCCTaGCCACTGTTGCATTATACT +
Preference number: 4 (lower is better)
Translates to: ENDRYKRESPGSDSIRSSSVASS*PLLHYT
Trigger: AGTATAATGCAACAGTGGCCAGGATGAAGCCACACT...TGAGCTCCTGATTGAGTCAGACCCTGGACTTTCCCTTTTGTATCTGTCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp TTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCAATAAAACACATCTCTaGTATGAGGGGCTTAGTCTT +
Preference number: 4 (lower is better)
Translates to: LVTKLWKPDLPLSETHPVNKTHL*YEGLSL
Trigger: AAGACTAAGCCCCTCATACCAGAGATGTGTTTTATT...GACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTTATTTGTGTCCTTTCTaGGACATTAGTGAATCGAAC +
Preference number: 4 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVYLCPF*DISESN
Trigger: GTTCGATTCACTAATGTCCCAGAAAGGACACAAATA...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp CAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCTCAACCTGGTACATGTaGGCAATATTTGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: QTLETRFTTVRDTPCHLCSTWYM*AIFDPK
Trigger: TTTTGGATCAAATATTGCCCACATGTACCAGGTTGA...GCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTGACAAGGAATTCACTTaGCAGGTCCCCAAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIDKEFT*QVPKWH
Trigger: ATGCCACTTGGGGACCTGCCAAGTGAATTCCTTGTC...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AATGACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCCTGACAGACATAGAGTaGATTCTCTTAGATTCAAGC +
Preference number: 4 (lower is better)
Translates to: NDLSSHSMCDNMSFSNRSLTDIE*ILLDSS
Trigger: GCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAG...GGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTACCTCCATGGAGGGTCTaGAGGTCATTATCTTACAGC +
Preference number: 4 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLPPWRV*RSLSYS
Trigger: GCTGTAAGATAATGACCTTCAGACCCTCCATGGAGG...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp ATGAATATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACACCTGTGACCATCTGCTaGATTGGTGCTGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: MNISCCPLRNYGSPKSTTPVTIC*IGAGMS
Trigger: GCTCATTCCAGCACCAATTCAGCAGATGGTCACAGG...TGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAATATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR TCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTTCTGGATGTTGTACTaGGTGAACAGTCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIFWMLY*VNSPDC
Trigger: GCAGTCAGGACTGTTCACTCAGTACAACATCCAGAA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp AAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATTGATGGGAGTAGGCTTCGTGTaGTCAATGGTGTATATATCC +
Preference number: 4 (lower is better)
Translates to: KQHLKQWRRGCNFPNELMGVGFV*SMVYIS
Trigger: GGATATATACACCATTGATCACACGAAGCCTACTCC...CATCAATTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCTTCACTGCTGCTTCTaGCTTTTCACTGACCTTGAG +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHILHCCF*LFTDLE
Trigger: CTCAAGGTCAGTGAAAAGTCAGAAGCAGCAGTGAAG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp GGCATCTTTAATTCACCATATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCCTTCACTGCTGCTTCTaGCTTTTCACTGACCTTGAG +
Preference number: 4 (lower is better)
Translates to: GIFNSPYCRCCILNANDLLHCCF*LFTDLE
Trigger: CTCAAGGTCAGTGAAAAGTCAGAAGCAGCAGTGAAG...GAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAAAGCTCGGATGGGTCTaGTTTCTCGGGCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRKLGWV*FLGLLI
Trigger: TATGAGAAGCCCGAGAAATCAGACCCATCCGAGCTT...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATTCGTGATGACCGTTTaGCCCACGGAAATGACCTTC +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRFVMTV*PTEMTF
Trigger: GAAGGTCATTTCCGTGGGTCAAACGGTCATCACGAA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATGGGCTTGGGAAACATaGGGTGAGGACAAGGAATTC +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRWAWET*GEDKEF
Trigger: GAATTCCTTGTCCTCACCTCATGTTTCCCAAGCCCA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp TGCTCAAGATGTTCTCCTGGTGTGTATTCTGAACTCAGGATTGGATACTGCCTCTGTGTTTTCCATCCATaGCAGAACAATGCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: CSRCSPGVYSELRIGYCLCVFHP*QNNAQD
Trigger: ATCTTGAGCATTGTTCTGTCATGGATGGAAAACACA...GAGGCAGTATCCAATCCTGAGTTCAGAATACACACCAGGAGAACATCTTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp TTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAAATCACAAGCCTCTGGGCCTGTaGTGTGCTGTAGAAAAATGG +
Preference number: 4 (lower is better)
Translates to: LIPMTIFEAVVGHVGLNHKPLGL*CAVEKW
Trigger: CCATTTTTCTACAGCACATCACAGGCCCAGAGGCTT...GTGATTTAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp ACCTCAGGATGCATCCAAATCATTAACCTGATGCACCTTGGAAAGCTTTTGATTCATCTTGAATGCCAATaGCCTCTCTTCCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: TSGCIQIINLMHLGKLLIHLECQ*PLFPQH
Trigger: ATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATG...AATCAAAAGCTTTCCAAGGTGCATCAGGTTAATGATTTGGATGCATCCTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAAGTAGGTGTTGCATCTTaGATGCCAATGACCTCTCTT +
Preference number: 4 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNEVGVAS*MPMTSL
Trigger: AAGAGAGGTCATTGGCATTCAAGATGCAACACCTAC...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGAGGAGGAATCACCTTTaGAAGACCCGCACGATGGGC +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALRRNHL*KTRTMG
Trigger: GCCCATCGTGCGGGTCTTGCAAAGGTGATTCCTCCT...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp ACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAAAAAGGAGGAATCACCTTTaGAAGACCCGCACGATGGGC +
Preference number: 4 (lower is better)
Translates to: TDSTRVNLISIHAICVLKRRNHL*KTRTMG
Trigger: GCCCATCGTGCGGGTCTTGCAAAGGTGATTCCTCCT...TTTTAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR GCA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATCAAGTCGTTTTCCATaGTCCGGAGGTATAGCATAC +
Preference number: 4 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNESSRFP*SGGIAY
Trigger: GTATGCTATACCTCCGGAGCATGGAAAACGACTTGA...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTACTTGTGGCGAAGAAATaGATCACACCCTTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLLVAKK*ITPLGA
Trigger: AGCTCCCAAGGGTGTGATGCATTTCTTCGCCACAAG...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTTCACCATGTCTTTCCTaGAAGTGCACAATTTGGCAA +
Preference number: 4 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPSPCLS*KCTIWQ
Trigger: TTGCCAAATTGTGCACTTGCAGGAAAGACATGGTGA...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTAAATTCTGCTCCACCTaGATCCTGCTAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIKFCST*ILLADD
Trigger: GTCATCTGCTAGCAGGATGCAGGTGGAGCAGAATTT...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp TTCTGCTCCACCTGCATCCTGCTAGCAGATGACTCTTCTTCTGAAGATGCTTCTAGGTACACTTCTATATaGATAAGCTTTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: FCSTCILLADDSSSEDASRYTSI*ISFVIL
Trigger: GAGGATGACAAAGCTTATGCATATAGAAGTGTACCT...AGAAGCATCTTCAGAAGAAGAGTCATCTGCTAGCAGGATGCAGGTGGAGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp ACCTCAGGATGCATCCAAATCATTAACCTGATGCACCTTGGAAAGCTTTTGATTATACTCTTGCTCAGCTaGGAAGTTAGGGGACTTCGT +
Preference number: 4 (lower is better)
Translates to: TSGCIQIINLMHLGKLLIILLLS*EVRGLR
Trigger: ACGAAGTCCCCTAACTTCGCAGCTGAGCAAGAGTAT...AATCAAAAGCTTTCCAAGGTGCATCAGGTTAATGATTTGGATGCATCCTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCATCCTGGCCACTGTTaGATTATACTCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIHPGHC*IILLLS
Trigger: GCTGAGCAAGAGTATAATGCAACAGTGGCCAGGATG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp GCGTCCAATTCATTGGGTGTATTTTGTATTTTTGGTGACCAAACTCTGGAAACCCATCCTGGCCACTGTTaGATTATACTCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ASNSLGVFCIFGDQTLETHPGHC*IILLLS
Trigger: GCTGAGCAAGAGTATAATGCAACAGTGGCCAGGATG...GGTTTCCAGAGTTTGGTCACCAAAAATACAAAATACACCCAATGAATTGGACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp CACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGATCATCCTGGCCACTGTTaGATTATACTCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: HLNSKYVQLLCCAARRKDHPGHC*IILLLS
Trigger: GCTGAGCAAGAGTATAATGCAACAGTGGCCAGGATG...ATCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTAATACCATAACAACTTaGATGAACCCGTACGCAGCA +
Preference number: 4 (lower is better)
Translates to: YCRCCILNANDLSSHSMCNTITT*MNPYAA
Trigger: TGCTGCGTACGGGTTCATGCAAGTTGTTATGGTATT...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCACCTCCTCTCAAATTaGAGAGACAGCATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIHLLSN*RDSILL
Trigger: CAGCAGAATGCTGTCTCTGCAATTTGAGAGGAGGTG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp AATGACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCTCTGTAAAGGTATTCTaGCTACATCTATTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: NDLSSHSMCDNMSFSNRSSVKVF*LHLFVS
Trigger: GGACACAAATAGATGTAGGCAGAATACCTTTACAGA...GGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTCTGTAAAGGTATTCTaGCTACATCTATTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLSVKVF*LHLFVS
Trigger: GGACACAAATAGATGTAGGCAGAATACCTTTACAGA...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCGTAGGAACACTGGATaGAGGCTCCAGAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALRRNTG*RLQRPS
Trigger: AGAGGGTCTCTGGAGCCTGCATCCAGTGTTCCTACG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTCACAGCCATCACTCTaGAACTGTAATACCGGGTGT +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHISQPSL*NCNTGC
Trigger: ACACCCGGTATTACAGTTGCAGAGTGATGGCTGTGA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp GCGTCCAATTCATTGGGTGTATTTTGTATTTTTGGTGACCAAACTCTGGAAACCTCACAGCCATCACTCTaGAACTGTAATACCGGGTGT +
Preference number: 4 (lower is better)
Translates to: ASNSLGVFCIFGDQTLETSQPSL*NCNTGC
Trigger: ACACCCGGTATTACAGTTGCAGAGTGATGGCTGTGA...GGTTTCCAGAGTTTGGTCACCAAAAATACAAAATACACCCAATGAATTGGACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTATTATAATGCCTCCATaGTACAGGAGACAACCTCAG +
Preference number: 4 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPIIMPP*YRRQPQ
Trigger: CTGAGGTTGTCTCCTGTAGCATGGAGGCATTATAAT...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGACGGCCCAGGGAGATTTaGGAAATTTGGGAGACTTGT +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRRPREI*EIWETC
Trigger: ACAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCG...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp ATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTTCTTGCAAGTGCACAATTTaGCAACTTTTCCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: MSMTQVTLAMKARMGLISCKCTI*QLFHSQ
Trigger: TTGACTATGGAAAAGTTGCCAAATTGTGCACTTGCA...AGAAATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCAATTCTTCATCACTTaGCGCCTGCTGCTTCACAAG +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIQFFIT*RLLLHK
Trigger: CTTGTGAAGCAGCAGGCGCCAAGTGATGAAGAATTG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp GCGTCCAATTCATTGGGTGTATTTTGTATTTTTGGTGACCAAACTCTGGAAACCCAATTCTTCATCACTTaGCGCCTGCTGCTTCACAAG +
Preference number: 4 (lower is better)
Translates to: ASNSLGVFCIFGDQTLETQFFIT*RLLLHK
Trigger: CTTGTGAAGCAGCAGGCGCCAAGTGATGAAGAATTG...GGTTTCCAGAGTTTGGTCACCAAAAATACAAAATACACCCAATGAATTGGACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGATCAATTCTTCATCACTTaGCGCCTGCTGCTTCACAAG +
Preference number: 4 (lower is better)
Translates to: HLNSKYVQLLCCAARRKDQFFIT*RLLLHK
Trigger: CTTGTGAAGCAGCAGGCGCCAAGTGATGAAGAATTG...ATCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp TCACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGACCACTTCCTCCTCAATaGACAGAACCTCAGGCAATT +
Preference number: 4 (lower is better)
Translates to: SPKLKIRSVALLCSKKEGPLPPQ*TEPQAI
Trigger: AATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGG...TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATTCGTCTGCCAAAGGTaGATGAGAGGTTTCGCCCAA +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRFVCQR*MRGFAQ
Trigger: TTGGGCGAAACCTCTCATCCACCTTTGGCAGACGAA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp TGGAATGGAATCATCAGCCTCACTGGATATAGAAGGTACACTTCTATATGCATATTCGTCTGCCAAAGGTaGATGAGAGGTTTCGCCCAA +
Preference number: 4 (lower is better)
Translates to: WNGIISLTGYRRYTSICIFVCQR*MRGFAQ
Trigger: TTGGGCGAAACCTCTCATCCACCTTTGGCAGACGAA...TATGCATATAGAAGTGTACCTTCTATATCCAGTGAGGCTGATGATTCCATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp TTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAAATCACTTCGTCTGCCAAAGGTaGATGAGAGGTTTCGCCCAA +
Preference number: 4 (lower is better)
Translates to: LIPMTIFEAVVGHVGLNHFVCQR*MRGFAQ
Trigger: TTGGGCGAAACCTCTCATCCACCTTTGGCAGACGAA...GTGATTTAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp TGTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACAAGTGTGGCTTCATCCTaGCCACTGTTGCATTATACT +
Preference number: 4 (lower is better)
Translates to: CIFGDQTLETRFTTVRDTSVASS*PLLHYT
Trigger: AGTATAATGCAACAGTGGCCAGGATGAAGCCACACT...TGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTTCATTGCTGCTATCTaGCTTGTGGTACGGCATGAG +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIFIAAI*LVVRHE
Trigger: CTCATGCCGTACCACAAGCCAGATAGCAGCAATGAA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp GGCATCTTTAATTCACCATATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTTCATTGCTGCTATCTaGCTTGTGGTACGGCATGAG +
Preference number: 4 (lower is better)
Translates to: GIFNSPYCRCCILNANDLFIAAI*LVVRHE
Trigger: CTCATGCCGTACCACAAGCCAGATAGCAGCAATGAA...GAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp CAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCAAGGAAGGCATTGGGTaGAGAATATTCTATATTTTC +
Preference number: 4 (lower is better)
Translates to: QTLETRFTTVRDTPCHLCKEGIG*RIFYIF
Trigger: GAAAATATAGAATATTCTCCACCCAATGCCTTCCTT...GCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGCTTCAAGGAAGGCATTaGGTGGAGAATATTCTATAT +
Preference number: 4 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLLQGRH*VENILY
Trigger: ATATAGAATATTCTCCACCCAATGCCTTCCTTGAAG...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGTGATTATTTGTGTCCTTTCTaGGACATTAGTGAATCGAAC +
Preference number: 4 (lower is better)
Translates to: RLTDIEWILLDSSLWACDYLCPF*DISESN
Trigger: GTTCGATTCACTAATGTCCCAGAAAGGACACAAATA...ATCACAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp ACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAAAAACCCAAGCTGCTCTGTaGCCTGCAGCGATGTATGCA +
Preference number: 4 (lower is better)
Translates to: TDSTRVNLISIHAICVLKTQAAL*PAAMYA
Trigger: TGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGT...TTTTAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
3UTR CAA 72 bp GGCATCTTTAATTCACCATATTGTAGGTGTTGCATCTaGAATGCCAATGACCTCTCTTCCCACAGCATGTGT +
Preference number: 4 (lower is better)
Translates to: GIFNSPYCRCCI*NANDLSSHSMC
Trigger: ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AATACTGCTTCTGCTTTAAGGTGTCAGTATGATGCATCATATTTCCTGTTTTCCCCTCCATGGAGGGTCTaGAGGTCATTATCTTACAGC +
Preference number: 4 (lower is better)
Translates to: NTASALRCQYDASYFLFSPPWRV*RSLSYS
Trigger: GCTGTAAGATAATGACCTTCAGACCCTCCATGGAGG...GGAAAACAGGAAATATGATGCATCATACTGACACCTTAAAGCAGAAGCAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR TCA 90 bp CCTACTGATGAATATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGATGCAAGGTATTTGTTaGACTCCCGGAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PTDEYFLLSFEELWITQKMQGIC*TPGTPP
Trigger: TGGAGGAGTTCCGGGAGTTCAACAAATACCTTGCAT...CTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR TCA 90 bp CATCTAGCATCATTTTCTTCATTGCTGCTATCTGGCTTGTGGTACGGCATGAGCGAATTGGTGCTGGAATaGGCAAATTATCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: HLASFSSLLLSGLWYGMSELVLE*ANYQCH
Trigger: ATGACATTGATAATTTGCTCATTCCAGCACCAATTC...GCTCATGCCGTACCACAAGCCAGATAGCAGCAATGAAGAAAATGATGCTAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTATTCTGGATGTTGTACTaGGTGAACAGTCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLFWMLY*VNSPDC
Trigger: GCAGTCAGGACTGTTCACTCAGTACAACATCCAGAA...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTGGAGTAGGCTTCGTGTaGTCAATGGTGTATATATCC +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIGVGFV*SMVYIS
Trigger: GGATATATACACCATTGATCACACGAAGCCTACTCC...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp AAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTACTTCACGTTGGGGTTaGCCTTATGTCGAAAGCATG +
Preference number: 4 (lower is better)
Translates to: KGNTDSTRVNLISIHAICTSRWG*PYVESM
Trigger: CATGCTTTCGACATAAGGTCAACCCCAACGTGAAGT...ACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGTTTGACCCACGGAAATaGCCTTCTCGCAAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALFDPRK*PSRKPW
Trigger: CCAAGGCTTGCGAGAAGGTCATTTCCGTGGGTCAAA...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTTCCAAATCATTAACCTaGTGCACCTTGGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: YCRCCILNANDLSSHSMCSKSLT*CTLESF
Trigger: AAAGCTTTCCAAGGTGCATCAGGTTAATGATTTGGA...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTTCCAAATCATTAACCTaGTGCACCTTGGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPSKSLT*CTLESF
Trigger: AAAGCTTTCCAAGGTGCATCAGGTTAATGATTTGGA...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp ATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAAGAAGGAGAAAACAGGTaGACAGAACCTTGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: ISCCPLRNYGSPKSTTKEEGENR*TEPCPE
Trigger: TTCCGGGCAAGGTTCTGTGCACCTGTTTTCTCCTTC...TTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR GCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTGCTCCCATTAATATCTaGACCATAGATAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIAPINI*TIDRCH
Trigger: GTGGCACCTATCTATGGTGCAGATATTAATGGGAGC...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp AACAAACACTTTGACGATCATTGCGGTAAACTACAGGGGGAAATATCAACACCTGCTCCCATTAATATCTaGACCATAGATAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: NKHFDDHCGKLQGEISTPAPINI*TIDRCH
Trigger: GTGGCACCTATCTATGGTGCAGATATTAATGGGAGC...AGGTGTTGATATTTCCCCCTGTAGTTTACCGCAATGATCGTCAAAGTGTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTCAAGTCGTTTTCCATaGTCCGGAGGTATAGCATAC +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHISSRFP*SGGIAY
Trigger: GTATGCTATACCTCCGGAGCATGGAAAACGACTTGA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTTGTCTTTCCTGCAAGTaGACAATTTGGCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: YCRCCILNANDLSSHSMCCLSCK*TIWQLF
Trigger: GAAAAGTTGCCAAATTGTGCACTTGCAGGAAAGACA...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp AATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTATACTTCAGGGGTGGATaGTGGAGTAGGCTTCGTGTG +
Preference number: 4 (lower is better)
Translates to: NTDSTRVNLISIHAICVLYFRGG*WSRLRV
Trigger: CACACGAAGCCTACTCCAGCATCCACCCCTGAAGTA...TAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCTGGAAGCTTCGGGATaGTTTTCTTACTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHILEASG*FSYFPP
Trigger: AGGAGGAAAGTAAGAAAAGCATCCCGAAGCTTCCAG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAAAATTCTGCTCCACCTaGATCCTGCTAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLKFCST*ILLADD
Trigger: GTCATCTGCTAGCAGGATGCAGGTGGAGCAGAATTT...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGAGTCATCGGAGATCTTaGTGGAGGCCTGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALSHRRS*WRPAKW
Trigger: CCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACT...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTACATCCTGGCCACTGTTaGATTATACTCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLHPGHC*IILLLS
Trigger: GCTGAGCAAGAGTATAATGCAACAGTGGCCAGGATG...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGTCCACGCATTTCTTTTaGACCGGGCACACAGCCATC +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALSTHFF*TGHTAI
Trigger: GATGGCTGTGTGCCCGGTGCAAAAGAAATGCGTGGA...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp TTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGGTGTCTGCAGAAGATaGATTTCAATTTTAACCTCT +
Preference number: 4 (lower is better)
Translates to: FLVTKLWKPDLPLSETHPGVCRR*ISILTS
Trigger: AGAGGTTAAAATTGAAATGCATCTTCTGCAGACACC...AGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTGTCCTCTCTCTTCATTaGTATCTGGGATCCATCTTC +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIVLSLH*YLGSIF
Trigger: GAAGATGGATCCCAGATAGCAATGAAGAGAGAGGAC...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGAATTATGGATCCGGCCCAGGGAGATTTaGGAAATTTGGGAGACTTGT +
Preference number: 4 (lower is better)
Translates to: SRNPTDEYFLLSFEELWIRPREI*EIWETC
Trigger: ACAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCG...GATCCATAATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAATCATAGCACTGTCTTaGCTTCCACTCCTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRIIALS*LPLLRR
Trigger: CCTCCTAAGGAGTGGAAGCCAAGACAGTGCTATGAT...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp TTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAAATCACATCATAGCACTGTCTTaGCTTCCACTCCTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: LIPMTIFEAVVGHVGLNHIIALS*LPLLRR
Trigger: CCTCCTAAGGAGTGGAAGCCAAGACAGTGCTATGAT...GTGATTTAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAATCATAGCACTGTCTTaGCTTCCACTCCTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLIIALS*LPLLRR
Trigger: CCTCCTAAGGAGTGGAAGCCAAGACAGTGCTATGAT...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp TTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTCTGCTGAATTGGTGCTaGAATGAGCAAATTATCAAT +
Preference number: 4 (lower is better)
Translates to: FLVTKLWKPDLPLSETHPLLNWC*NEQIIN
Trigger: ATTGATAATTTGCTCATTCCAGCACCAATTCAGCAG...AGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CCA 90 bp TGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTGATCTGCTGAATTGGTGCTaGAATGAGCAAATTATCAAT +
Preference number: 4 (lower is better)
Translates to: CRCCILNANDLSSHSMCDLLNWC*NEQIIN
Trigger: ATTGATAATTTGCTCATTCCAGCACCAATTCAGCAG...ATCACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp TTCTGCTCCACCTGCATCCTGCTAGCAGATGACTCTTCTTCTGAAGATGCTTCTGTAATCCAAGTATCTTaGAGTACAATATTTGCCACT +
Preference number: 4 (lower is better)
Translates to: FCSTCILLADDSSSEDASVIQVS*STIFAT
Trigger: AGTGGCAAATATTGTACTCCAAGATACTTGGATTAC...AGAAGCATCTTCAGAAGAAGAGTCATCTGCTAGCAGGATGCAGGTGGAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGGTAATCCAAGTATCTTaGAGTACAATATTTGCCACT +
Preference number: 4 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLVIQVS*STIFAT
Trigger: AGTGGCAAATATTGTACTCCAAGATACTTGGATTAC...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTAATTCTCCAGCCTCCTaGGTTATCTTGTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHINSPAS*VILSKG
Trigger: TCCCTTTGACAAGATAACCCAGGAGGCTGGAGAATT...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp TCACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGAAATTCTCCAGCCTCCTaGGTTATCTTGTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: SPKLKIRSVALLCSKKEGNSPAS*VILSKG
Trigger: TCCCTTTGACAAGATAACCCAGGAGGCTGGAGAATT...TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp TGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTGATTGCAAGTGCACAATTTaGCAACTTTTCCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: CRCCILNANDLSSHSMCDCKCTI*QLFHSQ
Trigger: TTGACTATGGAAAAGTTGCCAAATTGTGCACTTGCA...ATCACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp CTGTTTCTTCCACTTCCTCCTCAATGGACAGAACCTCAGGCAATTCTTCATCACAAGCTGATATCTGTCTaGCTGAAATTTCCTCACAAA +
Preference number: 4 (lower is better)
Translates to: LFLPLPPQWTEPQAILHHKLISV*LKFPHK
Trigger: TTTGTGAGGAAATTTCAGCCAGACAGATATCAGCTT...GTGATGAAGAATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGGAAGAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGTTCAGGGGTGGATGCTaGAGTAGGCTTCGTGTGATC +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALFRGGC*SRLRVI
Trigger: GATCACACGAAGCCTACTCCAGCATCCACCCCTGAA...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAGTAGACCTAGCACACTaGAAGCTTCGGGATGCTTTT +
Preference number: 4 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLVDLAH*KLRDAF
Trigger: AAAAGCATCCCGAAGCTTCCAGTGTGCTAGGTCTAC...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGGGCCTGCTAAGTGGATaGCGCCAACTCTTAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALGLLSG*RQLLEV
Trigger: AACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCC...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGACCACTTCCTCCTCAATaGACAGAACCTCAGGCAATT +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRPLPPQ*TEPQAI
Trigger: AATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGG...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCTGCTATCTGGCTTGTaGTACGGCATGAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALLLSGL*YGMSRV
Trigger: CACTCTGCTCATGCCGTACCACAAGCCAGATAGCAG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp TGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTGATAATAAAACACATCTCTaGTATGAGGGGCTTAGTCTT +
Preference number: 4 (lower is better)
Translates to: CRCCILNANDLSSHSMCDNKTHL*YEGLSL
Trigger: AAGACTAAGCCCCTCATACCAGAGATGTGTTTTATT...ATCACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGAAGGAAGGCATTGGGTaGAGAATATTCTATATTTTC +
Preference number: 4 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLKEGIG*RIFYIF
Trigger: GAAAATATAGAATATTCTCCACCCAATGCCTTCCTT...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGAGTGAATCGAACTTCTaGGACCGCAACGGCGCACAT +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALSESNF*DRNGAH
Trigger: ATGTGCGCCGTTGCGGTCCCAGAAGTTCGATTCACT...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
3UTR CAA 72 bp ACCAGCAGCAGAAATCCTACTGATGAATATTTCCTGTaGTCCTTTGAGGAATTATGGATCACCCAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: TSSRNPTDEYFL*SFEELWITQKH
Trigger: GTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCTGCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR TCA 90 bp ATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAATTCTGGATGTTGTACTaGGTGAACAGTCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: ISCCPLRNYGSPKSTTKEFWMLY*VNSPDC
Trigger: GCAGTCAGGACTGTTCACTCAGTACAACATCCAGAA...TTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR TCA 90 bp TTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAAATCACCATCCAAGACTGTATTaGGGCGAGCTATGTTCCATT +
Preference number: 4 (lower is better)
Translates to: LIPMTIFEAVVGHVGLNHHPRLY*GELCSI
Trigger: AATGGAACATAGCTCGCCTCAATACAGTCTTGGATG...GTGATTTAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp TGTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCTGAGAGTTTGATATaGTCTGATAAATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CIFGDQTLETRFTTVRDTPESLI*SDKFCS
Trigger: GGAGCAGAATTTATCAGATCATATCAAACTCTCAGG...TGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGACTATACTGGGGACTTTaGAGCTATTTCTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRLYWGL*SYFSLH
Trigger: GTGGAGAGAGAAATAGCTTCAAAGTCCCCAGTATAG...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp AATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTATTCGTGATGACCGTTTaGCCCACGGAAATGACCTTC +
Preference number: 4 (lower is better)
Translates to: NTDSTRVNLISIHAICVLFVMTV*PTEMTF
Trigger: GAAGGTCATTTCCGTGGGTCAAACGGTCATCACGAA...TAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAATGCCGAGTCCCCTTTaGTCTACTCCTGAATACTTT +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRMPSPL*STPEYF
Trigger: AAAGTATTCAGGAGTAGATCAAAGGGGACTCGGCAT...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTATTAGCCTCTTCCACATaGATGCAGAACACTCCAACT +
Preference number: 4 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLLASST*MQNTPT
Trigger: AGTTGGAGTGTTCTGCATTCATGTGGAAGAGGCTAA...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536108.5
CDS-3UTR TCA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTACTTTCCTAATGAATTaGTGTTTTCACAGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPTFLMN*CFHSEP
Trigger: AGGCTCACTGTGAAAACATCAATTCATTAGGAAAGT...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTATGCTCCCATGGAGAATaGGAAACAGCATCTGAAACA +
Preference number: 4 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLCSHGE*ETASET
Trigger: TGTTTCAGATGCTGTTTCTCATTCTCCATGGGAGCA...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGGAAGGAGAAAACAGGTaGACAGAACCTTGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALEGENR*TEPCPE
Trigger: TTCCGGGCAAGGTTCTGTGCACCTGTTTTCTCCTTC...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAACATCTGCTGAATTGGTaGTGGAATGAGCAAATTATC +
Preference number: 4 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNEHLLNW*WNEQII
Trigger: GATAATTTGCTCATTCCAGCACCAATTCAGCAGATG...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp TGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAACACTTCGCTCCCATTAATATCTaGACCATAGATAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: CCPLRNYGSPKSTTKEHFAPINI*TIDRCH
Trigger: GTGGCACCTATCTATGGTGCAGATATTAATGGGAGC...GAAGTGTTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR GCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCTTGTGGCGAAGAAATaGATCACACCCTTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALLVAKK*ITPLGA
Trigger: AGCTCCCAAGGGTGTGATGCATTTCTTCGCCACAAG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp AAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATTGATGTGTCTTTCCTGCAAGTaGACAATTTGGCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: KQHLKQWRRGCNFPNELMCLSCK*TIWQLF
Trigger: GAAAAGTTGCCAAATTGTGCACTTGCAGGAAAGACA...CATCAATTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp ACCTCAGGATGCATCCAAATCATTAACCTGATGCACCTTGGAAAGCTTTTGATTTCACCATGTCTTTCCTaGAAGTGCACAATTTGGCAA +
Preference number: 4 (lower is better)
Translates to: TSGCIQIINLMHLGKLLISPCLS*KCTIWQ
Trigger: TTGCCAAATTGTGCACTTGCAGGAAAGACATGGTGA...AATCAAAAGCTTTCCAAGGTGCATCAGGTTAATGATTTGGATGCATCCTGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTAGGTACACTTCTATATaGATAAGCTTTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPRYTSI*ISFVIL
Trigger: GAGGATGACAAAGCTTATGCATATAGAAGTGTACCT...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGTTAGGGGACTTCGTCTaGCAAAGGTGGATGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALLGDFV*QRWMRG
Trigger: ACCTCTCATCCACCTTTGGCAGACGAAGTCCCCTAA...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGTTGCATTATACTCTTaGTCAGCTGCGAAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRVALYS*SAAKLG
Trigger: CCCTAACTTCGCAGCTGAGCAAGAGTATAATGCAAC...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp TGGAATGGAATCATCAGCCTCACTGGATATAGAAGGTACACTTCTATATGCATAGTTGCATTATACTCTTaGTCAGCTGCGAAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: WNGIISLTGYRRYTSICIVALYS*SAAKLG
Trigger: CCCTAACTTCGCAGCTGAGCAAGAGTATAATGCAAC...TATGCATATAGAAGTGTACCTTCTATATCCAGTGAGGCTGATGATTCCATTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp AAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATTGATGCATCATTTTCTTCATTaGTGCTATCTGGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: KQHLKQWRRGCNFPNELMHHFLH*CYLACG
Trigger: ACCACAAGCCAGATAGCAGCAATGAAGAAAATGATG...CATCAATTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp GTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACTCTGTAAAGGTATTCTaGCTACATCTATTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: VFLVTKLWKPDLPLSETHSVKVF*LHLFVS
Trigger: GGACACAAATAGATGTAGGCAGAATACCTTTACAGA...GTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp TCACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGACCTCTTCCACATGAATaGAGAACACTCCAACTATTC +
Preference number: 4 (lower is better)
Translates to: SPKLKIRSVALLCSKKEGPLPHE*RTLQLF
Trigger: GAATAGTTGGAGTGTTCTGCATTCATGTGGAAGAGG...TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536108.5
CDS-3UTR GCA 90 bp CACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGATGAGACAACCTCAGGATaGATCCAAATCATTAACCTG +
Preference number: 4 (lower is better)
Translates to: HLNSKYVQLLCCAARRKDETTSG*IQIINL
Trigger: CAGGTTAATGATTTGGATGCATCCTGAGGTTGTCTC...ATCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCATCTTCTTGTCCTTTaGACACAGGCATATCCCATT +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIHLLVL*TQAYPI
Trigger: AATGGGATATGCCTGTGTCCAAAGGACAAGAAGATG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp ATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAAATCATAGCACTGTCTTaGCTTCCACTCCTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: ISCCPLRNYGSPKSTTKEIIALS*LPLLRR
Trigger: CCTCCTAAGGAGTGGAAGCCAAGACAGTGCTATGAT...TTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTCTGCTGAATTGGTGCTaGAATGAGCAAATTATCAAT +
Preference number: 4 (lower is better)
Translates to: YCRCCILNANDLSSHSMCLLNWC*NEQIIN
Trigger: ATTGATAATTTGCTCATTCCAGCACCAATTCAGCAG...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTGACCATCTGCTGAATTaGTGCTGGAATGAGCAAATT +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIDHLLN*CWNEQI
Trigger: AATTTGCTCATTCCAGCACCAATTCAGCAGATGGTC...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AACAAACACTTTGACGATCATTGCGGTAAACTACAGGGGGAAATATCAACACCTGACCATCTGCTGAATTaGTGCTGGAATGAGCAAATT +
Preference number: 4 (lower is better)
Translates to: NKHFDDHCGKLQGEISTPDHLLN*CWNEQI
Trigger: AATTTGCTCATTCCAGCACCAATTCAGCAGATGGTC...AGGTGTTGATATTTCCCCCTGTAGTTTACCGCAATGATCGTCAAAGTGTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp TCACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGAGACCATCTGCTGAATTaGTGCTGGAATGAGCAAATT +
Preference number: 4 (lower is better)
Translates to: SPKLKIRSVALLCSKKEGDHLLN*CWNEQI
Trigger: AATTTGCTCATTCCAGCACCAATTCAGCAGATGGTC...TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAAATTCTCCAGCCTCCTaGGTTATCTTGTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLNSPAS*VILSKG
Trigger: TCCCTTTGACAAGATAACCCAGGAGGCTGGAGAATT...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp GAAAATGACAGATACAAAAGGGAAAGTCCAGGGTCTGACTCAATCAGGAGCTCAAAGCTGATATCTGTCTaGCTGAAATTTCCTCACAAA +
Preference number: 4 (lower is better)
Translates to: ENDRYKRESPGSDSIRSSKLISV*LKFPHK
Trigger: TTTGTGAGGAAATTTCAGCCAGACAGATATCAGCTT...TGAGCTCCTGATTGAGTCAGACCCTGGACTTTCCCTTTTGTATCTGTCATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTAAGCTGATATCTGTCTaGCTGAAATTTCCTCACAAA +
Preference number: 4 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPKLISV*LKFPHK
Trigger: TTTGTGAGGAAATTTCAGCCAGACAGATATCAGCTT...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp GGCATCTTTAATTCACCATATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCATAGCCACTAGACAATaGAATGGAATCATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GIFNSPYCRCCILNANDLIATRQ*NGIISL
Trigger: GAGGCTGATGATTCCATTCCATTGTCTAGTGGCTAT...GAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp TCACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGAATAGCCACTAGACAATaGAATGGAATCATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SPKLKIRSVALLCSKKEGIATRQ*NGIISL
Trigger: GAGGCTGATGATTCCATTCCATTGTCTAGTGGCTAT...TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp ACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAAAATTCGTCTGCCAAAGGTaGATGAGAGGTTTCGCCCAA +
Preference number: 4 (lower is better)
Translates to: TDSTRVNLISIHAICVLKFVCQR*MRGFAQ
Trigger: TTGGGCGAAACCTCTCATCCACCTTTGGCAGACGAA...TTTTAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGACGGCGCACATGACATaGGCCCACTTATTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALTAHMT*AHLLFF
Trigger: GAAGAACAATAAGTGGGCCCATGTCATGTGCGCCGT...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp CATCTAGCATCATTTTCTTCATTGCTGCTATCTGGCTTGTGGTACGGCATGAGCATTATTAACAGAGCATaGCCCCAATTTTGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: HLASFSSLLLSGLWYGMSIINRA*PQFWKD
Trigger: ATCTTTCCAAAATTGGGGCCATGCTCTGTTAATAAT...GCTCATGCCGTACCACAAGCCAGATAGCAGCAATGAAGAAAATGATGCTAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGATGCAAGGTATTTGTTaGACTCCCGGAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALMQGIC*TPGTPP
Trigger: TGGAGGAGTTCCGGGAGTTCAACAAATACCTTGCAT...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp CTGTACAAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCGAATTGGTGCTGGAATaGGCAAATTATCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: LYKGNTDSTRVNLISIHAELVLE*ANYQCH
Trigger: ATGACATTGATAATTTGCTCATTCCAGCACCAATTC...GGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTTGTACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR TCA 90 bp AAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATTGATGGAATTGGTGCTGGAATaGGCAAATTATCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: KQHLKQWRRGCNFPNELMELVLE*ANYQCH
Trigger: ATGACATTGATAATTTGCTCATTCCAGCACCAATTC...CATCAATTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp CTGGATAGTGAGGTTATGAGTGATATGGGATTCCTTCATTATTCTTTTCCTTATTTCTGGATGTTGTACTaGGTGAACAGTCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: LDSEVMSDMGFLHYSFPYFWMLY*VNSPDC
Trigger: GCAGTCAGGACTGTTCACTCAGTACAACATCCAGAA...ATAAGGAAAAGAATAATGAAGGAATCCCATATCACTCATAACCTCACTATCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR TCA 90 bp ACCTCAGGATGCATCCAAATCATTAACCTGATGCACCTTGGAAAGCTTTTGATTCCTGAGAGTTTGATATaGTCTGATAAATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TSGCIQIINLMHLGKLLIPESLI*SDKFCS
Trigger: GGAGCAGAATTTATCAGATCATATCAAACTCTCAGG...AATCAAAAGCTTTCCAAGGTGCATCAGGTTAATGATTTGGATGCATCCTGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGACTTCACGTTGGGGTTaGCCTTATGTCGAAAGCATG +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALTSRWG*PYVESM
Trigger: CATGCTTTCGACATAAGGTCAACCCCAACGTGAAGT...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTAGATTGCAAATGCCTTaGTGGTATCTTTGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIRLQMP*WYLCLL
Trigger: GAGCAAACAAAGATACCATCAAGGCATTTGCAATCT...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp CTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAACACTTTTTCCTGTTGTCCTTTaGGGAATTATGGATCACCCA +
Preference number: 4 (lower is better)
Translates to: LLSFEELWITQKHNKRTLFPVVL*GIMDHP
Trigger: TGGGTGATCCATAATTCCTCAAAGGACAACAGGAAA...AAGTGTTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR TCA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAAACTTTCCTAATGAATTaGTGTTTTCACAGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNETFLMN*CFHSEP
Trigger: AGGCTCACTGTGAAAACATCAATTCATTAGGAAAGT...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp TTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAAATCACTCCAATGACAATTTTTaGGGCTGTAGTAGGACACGT +
Preference number: 4 (lower is better)
Translates to: LIPMTIFEAVVGHVGLNHSNDNF*GCSRTR
Trigger: ACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGA...GTGATTTAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATCACCATGTCTTTCCTaGAAGTGCACAATTTGGCAA +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRSPCLS*KCTIWQ
Trigger: TTGCCAAATTGTGCACTTGCAGGAAAGACATGGTGA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGATACTCTTGCTCAGCTaGGAAGTTAGGGGACTTCGT +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALILLLS*EVRGLR
Trigger: ACGAAGTCCCCTAACTTCGCAGCTGAGCAAGAGTAT...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp AACAAACACTTTGACGATCATTGCGGTAAACTACAGGGGGAAATATCAACACCTCATCATTTTCTTCATTaGTGCTATCTGGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: NKHFDDHCGKLQGEISTPHHFLH*CYLACG
Trigger: ACCACAAGCCAGATAGCAGCAATGAAGAAAATGATG...AGGTGTTGATATTTCCCCCTGTAGTTTACCGCAATGATCGTCAAAGTGTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR GCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAAATACCATAACAACTTaGATGAACCCGTACGCAGCA +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRNTITT*MNPYAA
Trigger: TGCTGCGTACGGGTTCATGCAAGTTGTTATGGTATT...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTGATGGTATCTTTGTTTaGTCCTGGTGTTTTACACAG +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIDGIFV*SWCFTQ
Trigger: CTGTGTAAAACACCAGGAGCAAACAAAGATACCATC...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTACAGACATTCAATTATaGCGAGTCCCCTTTGATCTA +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHITDIQL*RVPFDL
Trigger: TAGATCAAAGGGGACTCGGCATAATTGAATGTCTGT...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGAGTATGGCCCAGGGATaGAAAAAGATTGGACATCCC +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALSMAQG*KKIGHP
Trigger: GGGATGTCCAATCTTTTTGCATCCCTGGGCCATACT...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp ACCTCAGGATGCATCCAAATCATTAACCTGATGCACCTTGGAAAGCTTTTGATTCCATATTGTAGGTGTTaGATCTTGAATGCCAATGAC +
Preference number: 4 (lower is better)
Translates to: TSGCIQIINLMHLGKLLIPYCRC*ILNAND
Trigger: GTCATTGGCATTCAAGATGCAACACCTACAATATGG...AATCAAAAGCTTTCCAAGGTGCATCAGGTTAATGATTTGGATGCATCCTGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp TGGAATGGAATCATCAGCCTCACTGGATATAGAAGGTACACTTCTATATGCATACATCTTCTTGTCCTTTaGACACAGGCATATCCCATT +
Preference number: 4 (lower is better)
Translates to: WNGIISLTGYRRYTSICIHLLVL*TQAYPI
Trigger: AATGGGATATGCCTGTGTCCAAAGGACAAGAAGATG...TATGCATATAGAAGTGTACCTTCTATATCCAGTGAGGCTGATGATTCCATTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGAGATTTGGGAAATTTaGGAGACTTGTTCCGCACTA +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHREIWEI*ETCSAL
Trigger: TAGTGCGGAACAAGTCTCCCAAATTTCCCAAATCTC...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp TGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAACACTTCGAGATTTGGGAAATTTaGGAGACTTGTTCCGCACTA +
Preference number: 4 (lower is better)
Translates to: CCPLRNYGSPKSTTKEHFEIWEI*ETCSAL
Trigger: TAGTGCGGAACAAGTCTCCCAAATTTCCCAAATCTC...GAAGTGTTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp TGGAATGGAATCATCAGCCTCACTGGATATAGAAGGTACACTTCTATATGCATAGAGATTTGGGAAATTTaGGAGACTTGTTCCGCACTA +
Preference number: 4 (lower is better)
Translates to: WNGIISLTGYRRYTSICIEIWEI*ETCSAL
Trigger: TAGTGCGGAACAAGTCTCCCAAATTTCCCAAATCTC...TATGCATATAGAAGTGTACCTTCTATATCCAGTGAGGCTGATGATTCCATTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp AAAATACCAGCAGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGGACCATCTGCTGAATTaGTGCTGGAATGAGCAAATT +
Preference number: 4 (lower is better)
Translates to: KIPAAEILLMNISCCPLRDHLLN*CWNEQI
Trigger: AATTTGCTCATTCCAGCACCAATTCAGCAGATGGTC...CCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCTGCTGGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp GAAAATGACAGATACAAAAGGGAAAGTCCAGGGTCTGACTCAATCAGGAGCTCAGTAATCCAAGTATCTTaGAGTACAATATTTGCCACT +
Preference number: 4 (lower is better)
Translates to: ENDRYKRESPGSDSIRSSVIQVS*STIFAT
Trigger: AGTGGCAAATATTGTACTCCAAGATACTTGGATTAC...TGAGCTCCTGATTGAGTCAGACCCTGGACTTTCCCTTTTGTATCTGTCATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp CTGTACAAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCAAGCTGATATCTGTCTaGCTGAAATTTCCTCACAAA +
Preference number: 4 (lower is better)
Translates to: LYKGNTDSTRVNLISIHAKLISV*LKFPHK
Trigger: TTTGTGAGGAAATTTCAGCCAGACAGATATCAGCTT...GGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTTGTACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CTGTACAAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCGCTTCGTGTGATCAATaGTGTATATATCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LYKGNTDSTRVNLISIHAASCDQ*CIYPFL
Trigger: AAGGAAAGGATATATACACCATTGATCACACGAAGC...GGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTTGTACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGGTAGACCTAGCACACTaGAAGCTTCGGGATGCTTTT +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALVDLAH*KLRDAF
Trigger: AAAAGCATCCCGAAGCTTCCAGTGTGCTAGGTCTAC...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAATAGCCACTAGACAATaGAATGGAATCATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRIATRQ*NGIISL
Trigger: GAGGCTGATGATTCCATTCCATTGTCTAGTGGCTAT...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTATCTTTGTTTGCTCCTaGTGTTTTACACAGAGCACA +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIIFVCS*CFTQST
Trigger: TGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGAT...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
3UTR CAA 72 bp CTTCTTCTTCAAGTATGGCCCAGGGATGCAAAAAGATaGGACATCCCTGATTTAAGAAAACCCTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LLLQVWPRDAKR*DIPDLRKPLVF
Trigger: AAAAACCAAGGGTTTTCTTAAATCAGGGATGTCCAATCTTTTTGCATCCCTGGGCCATACTTGAAGAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp CACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGATGAATTGGTGCTGGAATaGGCAAATTATCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: HLNSKYVQLLCCAARRKDELVLE*ANYQCH
Trigger: ATGACATTGATAATTTGCTCATTCCAGCACCAATTC...ATCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCATCCAAGACTGTATTaGGGCGAGCTATGTTCCATT +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALHPRLY*GELCSI
Trigger: AATGGAACATAGCTCGCCTCAATACAGTCTTGGATG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp AATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAGGAGTAGGCTTCGTGTaGTCAATGGTGTATATATCC +
Preference number: 4 (lower is better)
Translates to: NTDSTRVNLISIHAICVLGVGFV*SMVYIS
Trigger: GGATATATACACCATTGATCACACGAAGCCTACTCC...TAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp ACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAAAACTATACTGGGGACTTTaGAGCTATTTCTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: TDSTRVNLISIHAICVLKLYWGL*SYFSLH
Trigger: GTGGAGAGAGAAATAGCTTCAAAGTCCCCAGTATAG...TTTTAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAAAGATTGGACATCCCTaGTTTAAGAAAACCCTTGGT +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRKIGHP*FKKTLG
Trigger: ACCAAGGGTTTTCTTAAATCAGGGATGTCCAATCTT...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp AAAATACCAGCAGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGCATCTGCTGAATTGGTaGTGGAATGAGCAAATTATC +
Preference number: 4 (lower is better)
Translates to: KIPAAEILLMNISCCPLRHLLNW*WNEQII
Trigger: GATAATTTGCTCATTCCAGCACCAATTCAGCAGATG...CCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCTGCTGGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR GCA 90 bp AATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAGCTCCCATTAATATCTaGACCATAGATAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: NTDSTRVNLISIHAICVLAPINI*TIDRCH
Trigger: GTGGCACCTATCTATGGTGCAGATATTAATGGGAGC...TAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR GCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATGTCTTTCCTGCAAGTaGACAATTTGGCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRCLSCK*TIWQLF
Trigger: GAAAAGTTGCCAAATTGTGCACTTGCAGGAAAGACA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp ACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAAAAGTTGCATTATACTCTTaGTCAGCTGCGAAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: TDSTRVNLISIHAICVLKVALYS*SAAKLG
Trigger: CCCTAACTTCGCAGCTGAGCAAGAGTATAATGCAAC...TTTTAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR GCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATTATTGTTCTTCGTTTaGTTAAGAGCACCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRLLFFV*LRAPPL
Trigger: GAGAGGAGGTGCTCTTAAGCAAACGAAGAACAATAA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AATACTGCTTCTGCTTTAAGGTGTCAGTATGATGCATCATATTTCCTGTTTTCCCATCTTCTTGTCCTTTaGACACAGGCATATCCCATT +
Preference number: 4 (lower is better)
Translates to: NTASALRCQYDASYFLFSHLLVL*TQAYPI
Trigger: AATGGGATATGCCTGTGTCCAAAGGACAAGAAGATG...GGAAAACAGGAAATATGATGCATCATACTGACACCTTAAAGCAGAAGCAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCTGCTGAATTGGTGCTaGAATGAGCAAATTATCAAT +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHILLNWC*NEQIIN
Trigger: ATTGATAATTTGCTCATTCCAGCACCAATTCAGCAG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp CTGTACAAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCGTAATCCAAGTATCTTaGAGTACAATATTTGCCACT +
Preference number: 4 (lower is better)
Translates to: LYKGNTDSTRVNLISIHAVIQVS*STIFAT
Trigger: AGTGGCAAATATTGTACTCCAAGATACTTGGATTAC...GGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTTGTACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGAGTGTGGCTTCATCCTaGCCACTGTTGCATTATACT +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALSVASS*PLLHYT
Trigger: AGTATAATGCAACAGTGGCCAGGATGAAGCCACACT...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp TGTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACAAAGGAAGGCATTGGGTaGAGAATATTCTATATTTTC +
Preference number: 4 (lower is better)
Translates to: CIFGDQTLETRFTTVRDTKEGIG*RIFYIF
Trigger: GAAAATATAGAATATTCTCCACCCAATGCCTTCCTT...TGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAAAAGGAAGGCATTGGGTaGAGAATATTCTATATTTTC +
Preference number: 4 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNEKEGIG*RIFYIF
Trigger: GAAAATATAGAATATTCTCCACCCAATGCCTTCCTT...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCTTCAAGGAAGGCATTaGGTGGAGAATATTCTATAT +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHILQGRH*VENILY
Trigger: ATATAGAATATTCTCCACCCAATGCCTTCCTTGAAG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp GCGTCCAATTCATTGGGTGTATTTTGTATTTTTGGTGACCAAACTCTGGAAACCCTTCAAGGAAGGCATTaGGTGGAGAATATTCTATAT +
Preference number: 4 (lower is better)
Translates to: ASNSLGVFCIFGDQTLETLQGRH*VENILY
Trigger: ATATAGAATATTCTCCACCCAATGCCTTCCTTGAAG...GGTTTCCAGAGTTTGGTCACCAAAAATACAAAATACACCCAATGAATTGGACGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp ACCTCAGGATGCATCCAAATCATTAACCTGATGCACCTTGGAAAGCTTTTGATTCTTCAAGGAAGGCATTaGGTGGAGAATATTCTATAT +
Preference number: 4 (lower is better)
Translates to: TSGCIQIINLMHLGKLLILQGRH*VENILY
Trigger: ATATAGAATATTCTCCACCCAATGCCTTCCTTGAAG...AATCAAAAGCTTTCCAAGGTGCATCAGGTTAATGATTTGGATGCATCCTGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTATTTGTGTCCTTTCTaGGACATTAGTGAATCGAAC +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIYLCPF*DISESN
Trigger: GTTCGATTCACTAATGTCCCAGAAAGGACACAAATA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTCTTCAAACTCAACCTaGTACATGTGGGCAATATTT +
Preference number: 4 (lower is better)
Translates to: NALMVSLFAPGVLHRAHISSNST*YMWAIF
Trigger: AAATATTGCCCACATGTACCAGGTTGAGTTTGAAGA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAGACTACTGTCTCTTCTaGCACTTCTTCTGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: NTDSTRVNLISIHAICVLDYCLF*HFFWKE
Trigger: CTCTTTCCAGAAGAAGTGCCAGAAGAGACAGTAGTC...TAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp CCTACTGATGAATATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGTCCTTTGAGGAATTATaGATCACCCAAAAGCACAAC +
Preference number: 4 (lower is better)
Translates to: PTDEYFLLSFEELWITQKSFEEL*ITQKHN
Trigger: GTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGA...CTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTACTGACAGACATAGAGTaGATTCTCTTAGATTCAAGC +
Preference number: 4 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLLTDIE*ILLDSS
Trigger: GCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAG...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp AAAATACCAGCAGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGGAATTGGTGCTGGAATaGGCAAATTATCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: KIPAAEILLMNISCCPLRELVLE*ANYQCH
Trigger: ATGACATTGATAATTTGCTCATTCCAGCACCAATTC...CCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCTGCTGGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR TCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATGGTATGTGAGGGCATaGAACTACTATTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRWYVRA*NYYFLF
Trigger: AAAAAGGAAATAGTAGTTTCATGCCCTCACATACCA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp CTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAACACTTAACTGTCACATCCAATaGTCTTTACAAAACTCACTG +
Preference number: 4 (lower is better)
Translates to: LLSFEELWITQKHNKRTLNCHIQ*SLQNSL
Trigger: CAGTGAGTTTTGTAAAGATCATTGGATGTGACAGTT...AAGTGTTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR GCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAAGGTACACTTCTATATaGATAAGCTTTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRRYTSI*ISFVIL
Trigger: GAGGATGACAAAGCTTATGCATATAGAAGTGTACCT...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAAGGTACACTTCTATATaGATAAGCTTTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLRYTSI*ISFVIL
Trigger: GAGGATGACAAAGCTTATGCATATAGAAGTGTACCT...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR GCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCATTTTCTTCATTGCTaGTATCTGGCTTGTGGTACG +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALHFLHC*YLACGT
Trigger: CGTACCACAAGCCAGATAGCAGCAATGAAGAAAATG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATCTGTAAAGGTATTCTaGCTACATCTATTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRSVKVF*LHLFVS
Trigger: GGACACAAATAGATGTAGGCAGAATACCTTTACAGA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGGTGTCTGCAGAAGATaGATTTCAATTTTAACCTCT +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRGVCRR*ISILTS
Trigger: AGAGGTTAAAATTGAAATGCATCTTCTGCAGACACC...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp CCTACTGATGAATATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCTGCTGAATTGGTGCTaGAATGAGCAAATTATCAAT +
Preference number: 4 (lower is better)
Translates to: PTDEYFLLSFEELWITQKLLNWC*NEQIIN
Trigger: ATTGATAATTTGCTCATTCCAGCACCAATTCAGCAG...CTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATGCAAGTGCACAATTTaGCAACTTTTCCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRCKCTI*QLFHSQ
Trigger: TTGACTATGGAAAAGTTGCCAAATTGTGCACTTGCA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTATGCAAGTGCACAATTTaGCAACTTTTCCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLCKCTI*QLFHSQ
Trigger: TTGACTATGGAAAAGTTGCCAAATTGTGCACTTGCA...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAAAGCTGATATCTGTCTaGCTGAAATTTCCTCACAAA +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRKLISV*LKFPHK
Trigger: TTTGTGAGGAAATTTCAGCCAGACAGATATCAGCTT...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp TTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAAATCACGCTTCGTGTGATCAATaGTGTATATATCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LIPMTIFEAVVGHVGLNHASCDQ*CIYPFL
Trigger: AAGGAAAGGATATATACACCATTGATCACACGAAGC...GTGATTTAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAAATAAAACACATCTCTaGTATGAGGGGCTTAGTCTT +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRNKTHL*YEGLSL
Trigger: AAGACTAAGCCCCTCATACCAGAGATGTGTTTTATT...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAAATAAAACACATCTCTaGTATGAGGGGCTTAGTCTT +
Preference number: 4 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLNKTHL*YEGLSL
Trigger: AAGACTAAGCCCCTCATACCAGAGATGTGTTTTATT...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCTTCTTCTTCAAGTATaGCCCAGGGATGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALLLLQV*PRDAKR
Trigger: TCTTTTTGCATCCCTGGGCCATACTTGAAGAAGAAG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381306.7
3UTR CAA 72 bp ATCCAAATCATTAACCTGATGCACCTTGGAAAGCTTTaGATTCCAATGACAATTTTTGAGGCTGTAGTAGGA +
Preference number: 4 (lower is better)
Translates to: IQIINLMHLGKL*IPMTIFEAVVG
Trigger: TCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTTTCCAAGGTGCATCAGGTTAATGATTTGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR TCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCCTGAGAGTTTGATATaGTCTGATAAATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALPESLI*SDKFCS
Trigger: GGAGCAGAATTTATCAGATCATATCAAACTCTCAGG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp ACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAAAAGCTTTTCCTTGTGGGTaGTTCACTAGTATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TDSTRVNLISIHAICVLKAFPCG*FTSISF
Trigger: AAAGGAAATACTAGTGAATCACCCACAAGGAAAAGC...TTTTAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR TCA 90 bp ATGAATATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACATATCTAGCTTCAGTTTaGAAAATACCAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: MNISCCPLRNYGSPKSTTYLASV*KIPAAE
Trigger: TTCTGCTGCTGGTATTTTTCAAACTGAAGCTAGATA...TGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAATATTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR GCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCATCTGCTGAATTGGTaGTGGAATGAGCAAATTATC +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALHLLNW*WNEQII
Trigger: GATAATTTGCTCATTCCAGCACCAATTCAGCAGATG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCATCATTTTCTTCATTaGTGCTATCTGGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALHHFLH*CYLACG
Trigger: ACCACAAGCCAGATAGCAGCAATGAAGAAAATGATG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp ACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAAAACATCATTTTCTTCATTaGTGCTATCTGGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: TDSTRVNLISIHAICVLKHHFLH*CYLACG
Trigger: ACCACAAGCCAGATAGCAGCAATGAAGAAAATGATG...TTTTAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGTAATCCAAGTATCTTaGAGTACAATATTTGCCACT +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRVIQVS*STIFAT
Trigger: AGTGGCAAATATTGTACTCCAAGATACTTGGATTAC...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAAAGGAAGGCATTGGGTaGAGAATATTCTATATTTTC +
Preference number: 4 (lower is better)
Translates to: KIANALMVSLFAPGVLHRKEGIG*RIFYIF
Trigger: GAAAATATAGAATATTCTCCACCCAATGCCTTCCTT...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCTCTTCATTGCTATCTaGGATCCATCTTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALLFIAI*DPSSNS
Trigger: TGAGTTTGAAGATGGATCCCAGATAGCAATGAAGAG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR TCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGGAATTGGTGCTGGAATaGGCAAATTATCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALELVLE*ANYQCH
Trigger: ATGACATTGATAATTTGCTCATTCCAGCACCAATTC...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR GCA 90 bp ACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAAAAATCATAGAAGACAACTaGTCACAAGTGAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: TDSTRVNLISIHAICVLKIIEDN*SQVKAR
Trigger: TCTTGCTTTCACTTGTGAGCAGTTGTCTTCTATGAT...TTTTAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CCA 90 bp ATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAAGTAATCCAAGTATCTTaGAGTACAATATTTGCCACT +
Preference number: 4 (lower is better)
Translates to: ISCCPLRNYGSPKSTTKEVIQVS*STIFAT
Trigger: AGTGGCAAATATTGTACTCCAAGATACTTGGATTAC...TTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGGCTTCGTGTGATCAATaGTGTATATATCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALASCDQ*CIYPFL
Trigger: AAGGAAAGGATATATACACCATTGATCACACGAAGC...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CCA 90 bp AAGCTTTGTCATCCTCAGTTTTTATGTCTTCTGTTACAGATGTACTTAAGCAGCAAGGAAGGCATTGGGTaGAGAATATTCTATATTTTC +
Preference number: 4 (lower is better)
Translates to: KLCHPQFLCLLLQMYLSSKEGIG*RIFYIF
Trigger: GAAAATATAGAATATTCTCCACCCAATGCCTTCCTT...GCTGCTTAAGTACATCTGTAACAGAAGACATAAAAACTGAGGATGACAAAGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CCA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGTCAACCTGGTACATGTaGGCAATATTTGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: LLLNTFNVASTNKIANALSTWYM*AIFDPK
Trigger: TTTTGGATCAAATATTGCCCACATGTACCAGGTTGA...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS CCA 90 bp GGCCGCCCGATCACTGCGCCGCGCCTCACCCTCCCGTCGAGGGGGTaGGTGGGAGGCAGCGGCGAAGGCGCGCGCACCGCCGGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: GRPITAPRLTLPSRG*VGGSGEGARTAGSP
Trigger: GGGAGAGCCGGCGGTGCGCGCGCCTTCGCCGCTGCCTCCCACCCACCCCCTCGACGGGAGGGTGAGGCGCGGCGCAGTGATCGGGCGGCC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381306.7
ENST00000401787.7
ENST00000438023.5
CDS CCA 90 bp GCCCGATCACTGCGCCGCGCCTCACCCTCCCGTCGAGGGGGTGGGTaGGAGGCAGCGGCGAAGGCGCGCGCACCGCCGGCTCTCCCTGCG +
Preference number: 5 (lower is better)
Translates to: ARSLRRASPSRRGGG*EAAAKARAPPALPA
Trigger: CGCAGGGAGAGCCGGCGGTGCGCGCGCCTTCGCCGCTGCCTCCCACCCACCCCCTCGACGGGAGGGTGAGGCGCGGCGCAGTGATCGGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381306.7
ENST00000401787.7
ENST00000438023.5
CDS GCA 90 bp AGCTGTTCGCTGCGCACGCGCACAGGACCCCGGCCGCCCGATCACTaGGCCGCGCCTCACCCTCCCGTCGAGGGGGTGGGTGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SCSLRTRTGPRPPDH*AAPHPPVEGVGGRQ
Trigger: CTGCCTCCCACCCACCCCCTCGACGGGAGGGTGAGGCGCGGCGCAGTGATCGGGCGGCCGGGGTCCTGTGCGCGTGCGCAGCGAACAGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000401787.7
ENST00000438023.5
CDS TCA 90 bp GCGCACCGCCGGCTCTCCCTGCGCGAGGGCGCGCGCGCCGTCACGTaGCCGCTGGGGCCCGCACTTGGTGAGTCACGTGGGCTTACAAAC +
Preference number: 5 (lower is better)
Translates to: AHRRLSLREGARAVT*PLGPALGESRGLTN
Trigger: GTTTGTAAGCCCACGTGACTCACCAAGTGCGGGCCCCAGCGGTCACGTGACGGCGCGCGCGCCCTCGCGCAGGGAGAGCCGGCGGTGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381306.7
ENST00000401787.7
ENST00000438023.5
CDS TCA 90 bp GAACCTTGCCCGGAAGCGCTGGCTGGGGTCCCGCAGGGCTGGACCTaGTGTAGTCCACGCGCCACACGTCCTCCTGGGCGCCGACGCGCA +
Preference number: 5 (lower is better)
Translates to: EPCPEALAGVPQGWT*CSPRATRPPGRRRA
Trigger: TGCGCGTCGGCGCCCAGGAGGACGTGTGGCGCGTGGACTACATCAGGTCCAGCCCTGCGGGACCCCAGCCAGCGCTTCCGGGCAAGGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS TCA 90 bp CGAGGGCGCGCGCGCCGTCACGTGACCGCTGGGGCCCGCACTTGGTaGGTCACGTGGGCTTACAAACAGCTTAAAGGTGCCCGGCACGCT +
Preference number: 5 (lower is better)
Translates to: RGRARRHVTAGARTW*VTWAYKQLKGARHA
Trigger: AGCGTGCCGGGCACCTTTAAGCTGTTTGTAAGCCCACGTGACTCACCAAGTGCGGGCCCCAGCGGTCACGTGACGGCGCGCGCGCCCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381306.7
ENST00000401787.7
ENST00000438023.5
CDS TCA 90 bp GCCCAGGGAGATTTGGGAAATTTGGGAGACTTGTTCCGCACTAGGTaGCAGCTGTTCGCTGCGCACGCGCACAGGACCCCGGCCGCCCGA +
Preference number: 5 (lower is better)
Translates to: AQGDLGNLGDLFRTR*QLFAAHAHRTPAAR
Trigger: TCGGGCGGCCGGGGTCCTGTGCGCGTGCGCAGCGAACAGCTGTCACCTAGTGCGGAACAAGTCTCCCAAATTTCCCAAATCTCCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000401787.7
ENST00000438023.5
CDS-3UTR CAA 90 bp AGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCTGCTGTCTGGCGCGCGGGTaGGGGCGAGAGCACGACTCG +
Preference number: 5 (lower is better)
Translates to: RPAKWMAPTLRGFVLSLCCLARG*GREHDS
Trigger: CGAGTCGTGCTCTCGCCCCAACCCGCGCGCCAGACA...GCAGAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp CCCCGTGTGTTTCCTGACAGGGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTCTTCGTGATGACCGTTaGACCCACGGAAATGACCTT +
Preference number: 5 (lower is better)
Translates to: PRVFPDRALSRTRGPASSLRDDR*THGNDL
Trigger: AAGGTCATTTCCGTGGGTCAAACGGTCATCACGAAG...AGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCCCTGTCAGGAAACACACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS CCA 90 bp GGTTGGGGCGAGAGCACGACTCGGTGGAGGAGGAAGAGAAGACAGTaGCCTCCGGCCCAGGGAGATTTGGGAAATTTGGGAGACTTGTTC +
Preference number: 5 (lower is better)
Translates to: GWGESTTRWRRKRRQ*PPAQGDLGNLGDLF
Trigger: GAACAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCGGAGGCCACTGTCTTCTCTTCCTCCTCCACCGAGTCGTGCTCTCGCCCCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000401787.7
ENST00000438023.5
ENST00000489243.5
CDS-3UTR CAA 90 bp CTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATGGCGCGGCACGCTCTTGCTTaGGGCTCAACTTCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: LLHKSHRRSCWRPAKWMARHALA*GSTSAL
Trigger: CAGCGCGGAAGTTGAGCCCAAAGCAAGAGCGTGCCG...CGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS CCA 90 bp GGAAGAGAAGACAGTGGCCTCCGGCCCAGGGAGATTTGGGAAATTTaGGAGACTTGTTCCGCACTAGGTGACAGCTGTTCGCTGCGCACG +
Preference number: 5 (lower is better)
Translates to: GREDSGLRPREIWEI*ETCSALGDSCSLRT
Trigger: CGTGCGCAGCGAACAGCTGTCACCTAGTGCGGAACAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCGGAGGCCACTGTCTTCTCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000401787.7
ENST00000438023.5
CDS-3UTR CAA 90 bp CCACTTCCTCCTCAATGGACAGAACCTCAGGCAATTCTTCATCACTTGGCGCCTCAGGTGCACAGAACCTaGCCCGGAAGCGCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: PLPPQWTEPQAILHHLAPQVHRT*PGSAGW
Trigger: CCAGCCAGCGCTTCCGGGCAAGGTTCTGTGCACCTG...AGGCGCCAAGTGATGAAGAATTGCCTGAGGTTCTGTCCATTGAGGAGGAAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp ATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTCTCAACATCTGTCAGCCCTGTCTGGCGCGCGGGTaGGGGCGAGAGCACGACTCG +
Preference number: 5 (lower is better)
Translates to: MCDNMSFSNRSVLNICQPCLARG*GREHDS
Trigger: CGAGTCGTGCTCTCGCCCCAACCCGCGCGCCAGACA...GGGCTGACAGATGTTGAGAACGGACCTGTTGCTGAAGCTCATGTTATCACACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543771.5
CDS-3UTR CAA 90 bp TGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACAGGGCCCGCAATTCTTCATCACTaGGCGCCTGCTGCTTCACAA +
Preference number: 5 (lower is better)
Translates to: CHLLELEREVPVCFLTGPAILHH*APAASQ
Trigger: TTGTGAAGCAGCAGGCGCCAAGTGATGAAGAATTGC...GGGCCCTGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp GGCCCTAAGCCGCACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGGAATACCATAACAACTaGCATGAACCCGTACGCAGC +
Preference number: 5 (lower is better)
Translates to: GPKPHKGTRLLCGSGFSLEYHNN*HEPVRS
Trigger: GCTGCGTACGGGTTCATGCAAGTTGTTATGGTATTC...CAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTGCGGCTTAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS CCA 90 bp GGTGGAGGAGGAAGAGAAGACAGTGGCCTCCGGCCCAGGGAGATTTaGGAAATTTGGGAGACTTGTTCCGCACTAGGTGACAGCTGTTCG +
Preference number: 5 (lower is better)
Translates to: GGGGREDSGLRPREI*EIWETCSALGDSCS
Trigger: CGAACAGCTGTCACCTAGTGCGGAACAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCGGAGGCCACTGTCTTCTCTTCCTCCTCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000401787.7
ENST00000438023.5
CDS CCA 90 bp TTTGCCATCGGGCCACTTGACTTGGACGACTTCTCCCTCAGCAGGTaGGCCCAGCTTCAGACAGTCTCGGCTCACGATATCCTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: FAIGPLDLDDFSLSR*AQLQTVSAHDILRK
Trigger: TTTCCTGAGGATATCGTGAGCCGAGACTGTCTGAAGCTGGGCCCACCTGCTGAGGGAGAAGTCGTCCAAGTCAAGTGGCCCGATGGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000466673.1
ENST00000490806.5
CDS-3UTR CAA 90 bp GACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCCGGCCCAGGGAGATTaGGGAAATTTGGGAGACTTG +
Preference number: 5 (lower is better)
Translates to: DTPCHLCQQNSRHSPKDVPAQGD*GNLGDL
Trigger: CAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCGG...GACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CAA 90 bp CACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTGGGTGATTCACGCCTTGGACTTCACGTaGGGGTTGACCTTATGTCGA +
Preference number: 5 (lower is better)
Translates to: HKGTRLLCGSGFSLWVIHALDFT*GLTLCR
Trigger: TCGACATAAGGTCAACCCCAACGTGAAGTCCAAGGC...GTGAATCACCCACAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp CAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGAACCTTCTCGCAAGCCTaGGACTTCACGTTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: QRHTLSPMPAKLTAQPQGTFSQA*DFTLGL
Trigger: CAACCCCAACGTGAAGTCCAAGGCTTGCGAGAAGGT...TCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp CCGAGGTGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACACTTCGTGATGACCGTTaGACCCACGGAAATGACCTT +
Preference number: 5 (lower is better)
Translates to: PRCHLLELEREVPVCFLTLRDDR*THGNDL
Trigger: AAGGTCATTTCCGTGGGTCAAACGGTCATCACGAAG...TGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCACCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp CTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCTGCTATACGCTGGGGCCCGCACTaGGTGAGTCACGTGGGCTTA +
Preference number: 5 (lower is better)
Translates to: LLSGWRQLLEVLFSPSAIRWGPH*VSHVGL
Trigger: TAAGCCCACGTGACTCACCAAGTGCGGGCCCCAGCG...TATAGCAGAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp CCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCCTTCACAATATTTGCCACTGTaGGCCAGCTGCCTGAACTCC +
Preference number: 5 (lower is better)
Translates to: PCHLCQQNSRHSPKDVPSQYLPL*ASCLNS
Trigger: GGAGTTCAGGCAGCTGGCCAACAGTGGCAAATATTG...TGAAGGGACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CAA 90 bp CACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTGGGTGATTCACATGACTCAGGTGACTTaGGCCATGAAAGCTCGGATG +
Preference number: 5 (lower is better)
Translates to: HKGTRLLCGSGFSLWVIHMTQVT*AMKARM
Trigger: CATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCAT...GTGAATCACCCACAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp CACTTGGCGCCTGCTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCGCAATTCTTCATCACTaGGCGCCTGCTGCTTCACAA +
Preference number: 5 (lower is better)
Translates to: HLAPAASQESSEILLEACAILHH*APAASQ
Trigger: TTGTGAAGCAGCAGGCGCCAAGTGATGAAGAATTGC...GCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAGCAGGCGCCAAGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp CCGAGGTGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACAGAATACCATAACAACTaGCATGAACCCGTACGCAGC +
Preference number: 5 (lower is better)
Translates to: PRCHLLELEREVPVCFLTEYHNN*HEPVRS
Trigger: GCTGCGTACGGGTTCATGCAAGTTGTTATGGTATTC...TGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCACCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp CCGAGGTGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACAGACTTCACGTTGGGGTaGACCTTATGTCGAAAGCAT +
Preference number: 5 (lower is better)
Translates to: PRCHLLELEREVPVCFLTDFTLG*TLCRKH
Trigger: ATGCTTTCGACATAAGGTCAACCCCAACGTGAAGTC...TGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCACCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp CCGAGGTGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACAGCCTCCTGGGTTATCTaGTCAAAGGGAATACCATAT +
Preference number: 5 (lower is better)
Translates to: PRCHLLELEREVPVCFLTASWVI*SKGIPY
Trigger: ATATGGTATTCCCTTTGACAAGATAACCCAGGAGGC...TGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCACCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CAA 90 bp GACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCGCACCTCCTCTCAAATaGCAGAGACAGCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: DTPCHLCQQNSRHSPKDVAPPLK*QRQHSA
Trigger: AGCAGAATGCTGTCTCTGCAATTTGAGAGGAGGTGC...GACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp CCGAGGTGCCACCTGCTGGAGCTAGAGAGAGAGGTCCCCGTGTGTTTCCTGACATGTCCTCTCTCTTCATaGCTATCTGGGATCCATCTT +
Preference number: 5 (lower is better)
Translates to: PRCHLLELEREVPVCFLTCPLSS*LSGIHL
Trigger: AAGATGGATCCCAGATAGCAATGAAGAGAGAGGACA...TGTCAGGAAACACACGGGGACCTCTCTCTCTAGCTCCAGCAGGTGGCACCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS TCA 90 bp CCAAAAGCCCAAGTATGTTTCCTGCTGGGCTTGGGAAACATGAGGTaGGGACAAGGAATTCACTTGGCAGGTCCCCAAGTGGCATCTGCC +
Preference number: 5 (lower is better)
Translates to: PKAQVCFLLGLGNMR*GQGIHLAGPQVASA
Trigger: GGCAGATGCCACTTGGGGACCTGCCAAGTGAATTCCTTGTCCTCACCTCATGTTTCCCAAGCCCAGCAGGAAACATACTTGGGCTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381306.7
ENST00000490806.5
CDS-3UTR CAA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTGTCTGGCGCGCGGGTaGGGGCGAGAGCACGACTCG +
Preference number: 5 (lower is better)
Translates to: NALMVSLFAPGVLHRAHICLARG*GREHDS
Trigger: CGAGTCGTGCTCTCGCCCCAACCCGCGCGCCAGACA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp CCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCCTTCATCATCCTGGCCACTGTaGCATTATACTCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: PCHLCQQNSRHSPKDVPSSSWPL*HYTLAQ
Trigger: CTGAGCAAGAGTATAATGCAACAGTGGCCAGGATGA...TGAAGGGACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp AGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCTGCTTGCTGCTATCTGGCTaGTGGTACGGCATGAGCAGA +
Preference number: 5 (lower is better)
Translates to: RPAKWMAPTLRGFVLSLCLLLSG*WYGMSR
Trigger: TCTGCTCATGCCGTACCACAAGCCAGATAGCAGCAA...GCAGAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS TCA 90 bp AGGAGCGCATGGCCATCTCTGGCTTGGCTGCCACAACGTCAAGCATaGGGGCAGTGGCATAGATCTGACATTAAGCATCTCATCCATTTC +
Preference number: 5 (lower is better)
Translates to: RSAWPSLAWLPQRQA*GQWHRSDIKHLIHF
Trigger: GAAATGGATGAGATGCTTAATGTCAGATCTATGCCACTGCCCTCATGCTTGACGTTGTGGCAGCCAAGCCAGAGATGGCCATGCGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496464.1
CDS CCA 90 bp CAAGGATGTCCCTTCATCTTCTCTCTTCCAACCCAAGCTGCTCTGTaGCCTGCAGCGATGTATGCAGACTACTGTCTCTTCTGGCACTTC +
Preference number: 5 (lower is better)
Translates to: QGCPFIFSLPTQAAL*PAAMYADYCLFWHF
Trigger: GAAGTGCCAGAAGAGACAGTAGTCTGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGAGAGAAGATGAAGGGACATCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp CTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATGGCGGGAGATTTGGGAAATTaGGGAGACTTGTTCCGCACT +
Preference number: 5 (lower is better)
Translates to: LLHKSHRRSCWRPAKWMAGDLGN*GDLFRT
Trigger: AGTGCGGAACAAGTCTCCCAAATTTCCCAAATCTCC...CGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp AAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTTGTCTGGCGCGCGGGTaGGGGCGAGAGCACGACTCG +
Preference number: 5 (lower is better)
Translates to: KGNTDSTRVNLISIHAICCLARG*GREHDS
Trigger: CGAGTCGTGCTCTCGCCCCAACCCGCGCGCCAGACA...ACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CAA 90 bp CCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCCCTTCAATGTATGCAAGGTATTaGTTGAACTCCCGGAACTCC +
Preference number: 5 (lower is better)
Translates to: PCHLCQQNSRHSPKDVPSMYARY*LNSRNS
Trigger: GGAGTTCCGGGAGTTCAACAAATACCTTGCATACAT...TGAAGGGACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CAA 90 bp GACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGGATGTCACATCCAAGACTGTATaGAGGCGAGCTATGTTCCAT +
Preference number: 5 (lower is better)
Translates to: DTPCHLCQQNSRHSPKDVTSKTV*RRAMFH
Trigger: ATGGAACATAGCTCGCCTCAATACAGTCTTGGATGT...GACATCCTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CAA 90 bp GTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGCCCCAAGTGTTGCATTATACTCTaGCTCAGCTGCGAAGTTAGG +
Preference number: 5 (lower is better)
Translates to: VRDTPCHLCQQNSRHSPKCCIIL*LSCEVR
Trigger: CCTAACTTCGCAGCTGAGCAAGAGTATAATGCAACA...CTTGGGGCTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp AACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCGTCCACGCATTTCTTTaGCACCGGGCACACAGCCAT +
Preference number: 5 (lower is better)
Translates to: NPIYHCQRHTLSPMPAKLVHAFL*HRAHSH
Trigger: ATGGCTGTGTGCCCGGTGCAAAAGAAATGCGTGGAC...GAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp CACAAGGGGACCCGCCTCCTCTGTGGCAGTGGCTTTTCCTTGTGGGTGATTCACAGAGATGATTTCAGATaGCTGCGTCCAATTCATTGG +
Preference number: 5 (lower is better)
Translates to: HKGTRLLCGSGFSLWVIHRDDFR*LRPIHW
Trigger: CCAATGAATTGGACGCAGCAATCTGAAATCATCTCT...GTGAATCACCCACAAGGAAAAGCCACTGCCACAGAGGAGGCGGGTCCCCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS TCA 90 bp TTGATCCAAAATATTTTGCTCCATAGAGTTTGCCATCGGGCCACTTaGCTTGGACGACTTCTCCCTCAGCAGGTGGGCCCAGCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: LIQNILLHRVCHRAT*LGRLLPQQVGPASD
Trigger: GTCTGAAGCTGGGCCCACCTGCTGAGGGAGAAGTCGTCCAAGTCAAGTGGCCCGATGGCAAACTCTATGGAGCAAAATATTTTGGATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000466673.1
ENST00000490806.5
CDS GCA 90 bp ATGTCCCTTCATCTTCTCTCTTCCAACCCAAGCTGCTCTGTGGCCTaGAGCGATGTATGCAGACTACTGTCTCTTCTGGCACTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: MSLHLLSSNPSCSVA*SDVCRLLSLLALLL
Trigger: CAGAAGAAGTGCCAGAAGAGACAGTAGTCTGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGAGAGAAGATGAAGGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCAGGTGCACAGAACCTaGCCCGGAAGCGCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIQVHRT*PGSAGW
Trigger: CCAGCCAGCGCTTCCGGGCAAGGTTCTGTGCACCTG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCGCTGGGGCCCGCACTaGGTGAGTCACGTGGGCTTA +
Preference number: 5 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIRWGPH*VSHVGL
Trigger: TAAGCCCACGTGACTCACCAAGTGCGGGCCCCAGCG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp TCATCTTCTCTCTTCCAACCCAAGCTGCTCTGTGGCCTGCAGCGATGTATGCAGGGAGATTTGGGAAATTaGGGAGACTTGTTCCGCACT +
Preference number: 5 (lower is better)
Translates to: SSSLFQPKLLCGLQRCMQGDLGN*GDLFRT
Trigger: AGTGCGGAACAAGTCTCCCAAATTTCCCAAATCTCC...CTGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGAGAGAAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CAA 90 bp ATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAATGTCTGGCGCGCGGGTaGGGGCGAGAGCACGACTCG +
Preference number: 5 (lower is better)
Translates to: ISCCPLRNYGSPKSTTKECLARG*GREHDS
Trigger: CGAGTCGTGCTCTCGCCCCAACCCGCGCGCCAGACA...TTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CAA 90 bp GACTTTTCACTGACCTTGAGGTCATCTGTGACTGAGTCGGGGTTAGGGACCTCTCTTGGAGTACAATATTaGCCACTGTTGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: DFSLTLRSSVTESGLGTSLGVQY*PLLASC
Trigger: GCAGCTGGCCAACAGTGGCAAATATTGTACTCCAAG...AGAGGTCCCTAACCCCGACTCAGTCACAGATGACCTCAAGGTCAGTGAAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp CTGCTTCACAAGAGTCATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATGGCGGCTATACTGGGGACTTaGAAGCTATTTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LLHKSHRRSCWRPAKWMAAILGT*KLFLSP
Trigger: TGGAGAGAGAAATAGCTTCAAAGTCCCCAGTATAGC...CGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATGACTCTTGTGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp CATCGGAGATCTTGCTGGAGGCCTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTGTTGCATTATACTCTaGCTCAGCTGCGAAGTTAGG +
Preference number: 5 (lower is better)
Translates to: HRRSCWRPAKWMAPTLRGCCIIL*LSCEVR
Trigger: CCTAACTTCGCAGCTGAGCAAGAGTATAATGCAACA...ACCTCTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGATCTCCGATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp TCATCTTCTCTCTTCCAACCCAAGCTGCTCTGTGGCCTGCAGCGATGTATGCAGTCATCCTGGCCACTGTaGCATTATACTCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: SSSLFQPKLLCGLQRCMQSSWPL*HYTLAQ
Trigger: CTGAGCAAGAGTATAATGCAACAGTGGCCAGGATGA...CTGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGAGAGAAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp TACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCACGGCACAGGACTTCACGTTGGGGTaGACCTTATGTCGAAAGCAT +
Preference number: 5 (lower is better)
Translates to: YHCQRHTLSPMPAKLTAQDFTLG*TLCRKH
Trigger: ATGCTTTCGACATAAGGTCAACCCCAACGTGAAGTC...CTGTGCCGTGAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp CTCCTGGTGTGTATTCTGAACTCAGGATTGGATACTGCCTCCTTCCAGCGCTGGATTCTGAACTCAGGATaGGATACTGCCTCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LLVCILNSGLDTASFQRWILNSG*DTASFQ
Trigger: CTGGAAGGAGGCAGTATCCAATCCTGAGTTCAGAAT...CCAGCGCTGGAAGGAGGCAGTATCCAATCCTGAGTTCAGAATACACACCAGGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS TCA 90 bp AAGAGCAGTGGCAGCAGTGACATGCCACTACACGTAACATGCAGATaGGCCCTATCTCATATCAAAGAGGCTGCCATCTTCCTCGTCAAC +
Preference number: 5 (lower is better)
Translates to: KSSGSSDMPLHVTCR*ALSHIKEAAIFLVN
Trigger: GTTGACGAGGAAGATGGCAGCCTCTTTGATATGAGATAGGGCTCATCTGCATGTTACGTGTAGTGGCATGTCACTGCTGCCACTGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496464.1
CDS GCA 90 bp GAGGTGAGGACAAGGAATTCACTTGGCAGGTCCCCAAGTGGCATCTaGCAGCACTTACAAATCGAGCTTTCACTCTCTTGGGTAACTCTT +
Preference number: 5 (lower is better)
Translates to: EVRTRNSLGRSPSGI*QHLQIELSLSWVTL
Trigger: AAGAGTTACCCAAGAGAGTGAAAGCTCGATTTGTAAGTGCTGGCAGATGCCACTTGGGGACCTGCCAAGTGAATTCCTTGTCCTCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381306.7
ENST00000490806.5
CDS GCA 90 bp ACTACACGTAACATGCAGATGAGCCCTATCTCATATCAAAGAGGCTaGCATCTTCCTCGTCAACACAGTACTGCAGGCTGGTCATGCCCT +
Preference number: 5 (lower is better)
Translates to: TTRNMQMSPISYQRG*HLPRQHSTAGWSCP
Trigger: AGGGCATGACCAGCCTGCAGTACTGTGTTGACGAGGAAGATGGCAGCCTCTTTGATATGAGATAGGGCTCATCTGCATGTTACGTGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496464.1
CDS-3UTR CAA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCGGCACGCTCTTGCTTaGGGCTCAACTTCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIRHALA*GSTSAL
Trigger: CAGCGCGGAAGTTGAGCCCAAAGCAAGAGCGTGCCG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp CAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCTTGGAGTACAATATTaGCCACTGTTGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QTLETRFTTVRDTPCHLCLGVQY*PLLASC
Trigger: GCAGCTGGCCAACAGTGGCAAATATTGTACTCCAAG...GCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CAA 90 bp GGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACCTGCTGATAGCATACCAAGACTaGGGCTCTCCAAAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: GKYINYRPTRWVPRCHLLIAYQD*GSPKWR
Trigger: TCTCCACTTTGGAGAGCCCAAGTCTTGGTATGCTAT...CAGCAGGTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CAA 90 bp CAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCATGACTCAGGTGACTTaGGCCATGAAAGCTCGGATG +
Preference number: 5 (lower is better)
Translates to: QTLETRFTTVRDTPCHLCMTQVT*AMKARM
Trigger: CATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCAT...GCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp CTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCGCTATACTGGGGACTTaGAAGCTATTTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LWKPDLPLSETHPVTYASAILGT*KLFLSP
Trigger: TGGAGAGAGAAATAGCTTCAAAGTCCCCAGTATAGC...GCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTGCACCTCCTCTCAAATaGCAGAGACAGCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVAPPLK*QRQHSA
Trigger: AGCAGAATGCTGTCTCTGCAATTTGAGAGGAGGTGC...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp GTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACTTGCCATCGGGCCACTaGACTTGGACGACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: VFLVTKLWKPDLPLSETHLPSGH*TWTTSP
Trigger: GGGAGAAGTCGTCCAAGTCAAGTGGCCCGATGGCAA...GTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS TCA 90 bp TTAATCCAAAAGCCCAAGTATGTTTCCTGCTGGGCTTGGGAAACATaGGGTGAGGACAAGGAATTCACTTGGCAGGTCCCCAAGTGGCAT +
Preference number: 5 (lower is better)
Translates to: LIQKPKYVSCWAWET*GEDKEFTWQVPKWH
Trigger: ATGCCACTTGGGGACCTGCCAAGTGAATTCCTTGTCCTCACCTCATGTTTCCCAAGCCCAGCAGGAAACATACTTGGGCTTTTGGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381306.7
ENST00000490806.5
CDS-3UTR CAA 90 bp AGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGAATTATGGATCCAGGTGCACAGAACCTaGCCCGGAAGCGCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: SRNPTDEYFLLSFEELWIQVHRT*PGSAGW
Trigger: CCAGCCAGCGCTTCCGGGCAAGGTTCTGTGCACCTG...GATCCATAATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CAA 90 bp ACTGCTTCTGCTTTAAGGTGTCAGTATGATGCATCATATTTCCTGTTTTCCAAACGCTGGGGCCCGCACTaGGTGAGTCACGTGGGCTTA +
Preference number: 5 (lower is better)
Translates to: TASALRCQYDASYFLFSKRWGPH*VSHVGL
Trigger: TAAGCCCACGTGACTCACCAAGTGCGGGCCCCAGCG...TTTGGAAAACAGGAAATATGATGCATCATACTGACACCTTAAAGCAGAAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CAA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTATGCAAGGTATTTGTaGAACTCCCGGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: GFRLTDIEWILLDSSLWAYARYL*NSRNSS
Trigger: GGAGGAGTTCCGGGAGTTCAACAAATACCTTGCATA...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp ATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTGCTTGGAGTACAATATTaGCCACTGTTGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: IQADRHRVDSLRFKPLGLLGVQY*PLLASC
Trigger: GCAGCTGGCCAACAGTGGCAAATATTGTACTCCAAG...CAGGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp TTCTGCTCCACCTGCATCCTGCTAGCAGATGACTCTTCTTCTGAAGATGCTTCTATGACTCAGGTGACTTaGGCCATGAAAGCTCGGATG +
Preference number: 5 (lower is better)
Translates to: FCSTCILLADDSSSEDASMTQVT*AMKARM
Trigger: CATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCAT...AGAAGCATCTTCAGAAGAAGAGTCATCTGCTAGCAGGATGCAGGTGGAGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp TTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTTTGCTGCTATCTGGCTaGTGGTACGGCATGAGCAGA +
Preference number: 5 (lower is better)
Translates to: FLVTKLWKPDLPLSETHPLLLSG*WYGMSR
Trigger: TCTGCTCATGCCGTACCACAAGCCAGATAGCAGCAA...AGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp TGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTGATTTGCTGCTATCTGGCTaGTGGTACGGCATGAGCAGA +
Preference number: 5 (lower is better)
Translates to: CRCCILNANDLSSHSMCDLLLSG*WYGMSR
Trigger: TCTGCTCATGCCGTACCACAAGCCAGATAGCAGCAA...ATCACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp CTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCCTTATTGTTCTTCGTTaGCTTAAGAGCACCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LWKPDLPLSETHPVTYASLIVLR*LKSTSS
Trigger: AGAGGAGGTGCTCTTAAGCAAACGAAGAACAATAAG...GCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp GTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACACCTTCTCGCAAGCCTaGGACTTCACGTTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: VFLVTKLWKPDLPLSETHTFSQA*DFTLGL
Trigger: CAACCCCAACGTGAAGTCCAAGGCTTGCGAGAAGGT...GTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS TCA 90 bp TATTGCATTCAAGCCATCCTGGTAGCAGAAGAGCAGTGGCAGCAGTaGCATGCCACTACACGTAACATGCAGATGAGCCCTATCTCATAT +
Preference number: 5 (lower is better)
Translates to: YCIQAILVAEEQWQQ*HATTRNMQMSPISY
Trigger: ATATGAGATAGGGCTCATCTGCATGTTACGTGTAGTGGCATGTCACTGCTGCCACTGCTCTTCTGCTACCAGGATGGCTTGAATGCAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496464.1
CDS GCA 90 bp TACTTTCCTCCTCCTCTGCAGCCATGCTTTTACTTCAGGGGTGGATaGTGGAGTAGGCTTCGTGTGATCAATGGTGTATATATCCTTTCC +
Preference number: 5 (lower is better)
Translates to: YFPPPLQPCFYFRGG*WSRLRVINGVYILS
Trigger: GGAAAGGATATATACACCATTGATCACACGAAGCCTACTCCAGCATCCACCCCTGAAGTAAAAGCATGGCTGCAGAGGAGGAGGAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000428870.6
ENST00000438023.5
ENST00000536108.5
ENST00000543771.5
CDS GCA 90 bp GGAGCTCAGCACTCTTTGTCTCTTTCTCTCCCCTTGGATAATGTCTaGTCCATAAAACGTGTCTTCAAATCGCATGTCAGAGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: GAQHSLSLSLPLDNV*SIKRVFKSHVRGCG
Trigger: TCCACAGCCTCTGACATGCGATTTGAAGACACGTTTTATGGAGCAGACATTATCCAAGGGGAGAGAAAGAGACAAAGAGTGCTGAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS CCA 90 bp TTTCCTCCTCCTCTGCAGCCATGCTTTTACTTCAGGGGTGGATGCTaGAGTAGGCTTCGTGTGATCAATGGTGTATATATCCTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: FPPPLQPCFYFRGGC*SRLRVINGVYILSL
Trigger: CAAGGAAAGGATATATACACCATTGATCACACGAAGCCTACTCCAGCATCCACCCCTGAAGTAAAAGCATGGCTGCAGAGGAGGAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000428870.6
ENST00000438023.5
ENST00000536108.5
ENST00000543771.5
CDS CCA 90 bp TCTCACCCCACAGGAAGAAGTTTCATAACGGAGGGAAAGCACACATaGAACAGCCTATATTGCATTCAAGCCATCCTGGTAGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: SHPTGRSFITEGKHT*NSLYCIQAILVAEE
Trigger: CTCTTCTGCTACCAGGATGGCTTGAATGCAATATAGGCTGTTCCATGTGTGCTTTCCCTCCGTTATGAAACTTCTTCCTGTGGGGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496464.1
CDS-3UTR CAA 90 bp ACTGCTTCTGCTTTAAGGTGTCAGTATGATGCATCATATTTCCTGTTTTCCAAACGGCACGCTCTTGCTTaGGGCTCAACTTCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: TASALRCQYDASYFLFSKRHALA*GSTSAL
Trigger: CAGCGCGGAAGTTGAGCCCAAAGCAAGAGCGTGCCG...TTTGGAAAACAGGAAATATGATGCATCATACTGACACCTTAAAGCAGAAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CAA 90 bp ACTGCTTCTGCTTTAAGGTGTCAGTATGATGCATCATATTTCCTGTTTTCCAAAGTGCCCGGCACGCTCTaGCTTTGGGCTCAACTTCCG +
Preference number: 5 (lower is better)
Translates to: TASALRCQYDASYFLFSKVPGTL*LWAQLP
Trigger: CGGAAGTTGAGCCCAAAGCAAGAGCGTGCCGGGCAC...TTTGGAAAACAGGAAATATGATGCATCATACTGACACCTTAAAGCAGAAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CAA 90 bp GATAAATTCTGCTCCACCTGCATCCTGCTAGCAGATGACTCTTCTTCTGAAGATCAATATTTGCCACTGTaGGCCAGCTGCCTGAACTCC +
Preference number: 5 (lower is better)
Translates to: DKFCSTCILLADDSSSEDQYLPL*ASCLNS
Trigger: GGAGTTCAGGCAGCTGGCCAACAGTGGCAAATATTG...ATCTTCAGAAGAAGAGTCATCTGCTAGCAGGATGCAGGTGGAGCAGAATTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTACATCCAAGACTGTATaGAGGCGAGCTATGTTCCAT +
Preference number: 5 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVTSKTV*RRAMFH
Trigger: ATGGAACATAGCTCGCCTCAATACAGTCTTGGATGT...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp GACTGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACGCTATACTGGGGACTTaGAAGCTATTTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: DCGKYINYRPTRWVPRCHAILGT*KLFLSP
Trigger: TGGAGAGAGAAATAGCTTCAAAGTCCCCAGTATAGC...GTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp TGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTGATGCAATTCTTCATCACTaGGCGCCTGCTGCTTCACAA +
Preference number: 5 (lower is better)
Translates to: CRCCILNANDLSSHSMCDAILHH*APAASQ
Trigger: TTGTGAAGCAGCAGGCGCCAAGTGATGAAGAATTGC...ATCACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAAGTCCACGCATTTCTTTaGCACCGGGCACACAGCCAT +
Preference number: 5 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNEVHAFL*HRAHSH
Trigger: ATGGCTGTGTGCCCGGTGCAAAAGAAATGCGTGGAC...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp TGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTGATGCACCTCCTCTCAAATaGCAGAGACAGCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: CRCCILNANDLSSHSMCDAPPLK*QRQHSA
Trigger: AGCAGAATGCTGTCTCTGCAATTTGAGAGGAGGTGC...ATCACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTATCGGGCCACTTGACTaGGACGACTTCTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIIGPLD*DDFSLS
Trigger: GCTGAGGGAGAAGTCGTCCAAGTCAAGTGGCCCGAT...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp GCGTCCAATTCATTGGGTGTATTTTGTATTTTTGGTGACCAAACTCTGGAAACCATCGGGCCACTTGACTaGGACGACTTCTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: ASNSLGVFCIFGDQTLETIGPLD*DDFSLS
Trigger: GCTGAGGGAGAAGTCGTCCAAGTCAAGTGGCCCGAT...GGTTTCCAGAGTTTGGTCACCAAAAATACAAAATACACCCAATGAATTGGACGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTTTGCCATCGGGCCACTaGACTTGGACGACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: NALMVSLFAPGVLHRAHILPSGH*TWTTSP
Trigger: GGGAGAAGTCGTCCAAGTCAAGTGGCCCGATGGCAA...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCCAGCAAAACTCTGTCCTCTCTCTTCATaGCTATCTGGGATCCATCTT +
Preference number: 5 (lower is better)
Translates to: NPIYHCQRHTLSPMPAKLCPLSS*LSGIHL
Trigger: AAGATGGATCCCAGATAGCAATGAAGAGAGAGGACA...GAGTTTTGCTGGCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp TTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCTCTCTTTCTCTCCCCTaGGATAATGTCTGCTCCATA +
Preference number: 5 (lower is better)
Translates to: LVTKLWKPDLPLSETHPVSLSLP*DNVCSI
Trigger: TATGGAGCAGACATTATCCAAGGGGAGAGAAAGAGA...GACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp GGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACCTGCTGAGAGATGATTTCAGATaGCTGCGTCCAATTCATTGG +
Preference number: 5 (lower is better)
Translates to: GKYINYRPTRWVPRCHLLRDDFR*LRPIHW
Trigger: CCAATGAATTGGACGCAGCAATCTGAAATCATCTCT...CAGCAGGTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp TGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTGATCAGGAGCTCAGGCTATaGTATCCCCATCCTAAACAC +
Preference number: 5 (lower is better)
Translates to: CRCCILNANDLSSHSMCDQELRL*YPHPKH
Trigger: GTGTTTAGGATGGGGATACAATAGCCTGAGCTCCTG...ATCACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS TCA 90 bp TTTCCTGCAAGTGCAAGTTCTCCGAACAGCATCTTTCTGAAACGGTaGAGGGCTGATGGTAAACAAGCCAAGACGGTTTTAGAACTGAGG +
Preference number: 5 (lower is better)
Translates to: FPASASSPNSIFLKR*RADGKQAKTVLELR
Trigger: CCTCAGTTCTAAAACCGTCTTGGCTTGTTTACCATCAGCCCTTCACCGTTTCAGAAAGATGCTGTTCGGAGAACTTGCACTTGCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428870.6
CDS GCA 90 bp TGGATGACCCATCAGCTCAACCTTCTTCTCAGAAGCCTGAACATTTaGCAGGTTACAACGCACAGGAAGAAACTCATCATATATGCTCCC +
Preference number: 5 (lower is better)
Translates to: WMTHQLNLLLRSLNI*QVTTHRKKLIIYAP
Trigger: GGGAGCATATATGATGAGTTTCTTCCTGTGCGTTGTAACCTGGCAAATGTTCAGGCTTCTGAGAAGAAGGTTGAGCTGATGGGTCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480996.1
CDS CCA 90 bp TACATCTATTTGTGTCCTTTCTGGGACATTAGTGAATCGAACTTCTaGGACCGCAACGGCGCACATGACATGGGCCCACTTATTGTTCTT +
Preference number: 5 (lower is better)
Translates to: YIYLCPFWDISESNF*DRNGAHDMGPLIVL
Trigger: AAGAACAATAAGTGGGCCCATGTCATGTGCGCCGTTGCGGTCCCAGAAGTTCGATTCACTAATGTCCCAGAAAGGACACAAATAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGGTGCCCGGCACGCTCTaGCTTTGGGCTCAACTTCCG +
Preference number: 5 (lower is better)
Translates to: LLLNTFNVASTNKIANALVPGTL*LWAQLP
Trigger: CGGAAGTTGAGCCCAAAGCAAGAGCGTGCCGGGCAC...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp CTGGATAGTGAGGTTATGAGTGATATGGGATTCCTTCATTATTCTTTTCCTTATGTGCCCGGCACGCTCTaGCTTTGGGCTCAACTTCCG +
Preference number: 5 (lower is better)
Translates to: LDSEVMSDMGFLHYSFPYVPGTL*LWAQLP
Trigger: CGGAAGTTGAGCCCAAAGCAAGAGCGTGCCGGGCAC...ATAAGGAAAAGAATAATGAAGGAATCCCATATCACTCATAACCTCACTATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCCGGCCCAGGGAGATTaGGGAAATTTGGGAGACTTG +
Preference number: 5 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIPAQGD*GNLGDL
Trigger: CAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCGG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AACAAACACTTTGACGATCATTGCGGTAAACTACAGGGGGAAATATCAACACCTCCGGCCCAGGGAGATTaGGGAAATTTGGGAGACTTG +
Preference number: 5 (lower is better)
Translates to: NKHFDDHCGKLQGEISTPPAQGD*GNLGDL
Trigger: CAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCGG...AGGTGTTGATATTTCCCCCTGTAGTTTACCGCAATGATCGTCAAAGTGTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp CATTGCGGTAAACTACAGGGGGAAATATCAACACCTGAGTTAGTTCTGCACCTCATAGCATACCAAGACTaGGGCTCTCCAAAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: HCGKLQGEISTPELVLHLIAYQD*GSPKWR
Trigger: TCTCCACTTTGGAGAGCCCAAGTCTTGGTATGCTAT...GAGGTGCAGAACTAACTCAGGTGTTGATATTTCCCCCTGTAGTTTACCGCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTATGACTCAGGTGACTTaGGCCATGAAAGCTCGGATG +
Preference number: 5 (lower is better)
Translates to: YCRCCILNANDLSSHSMCMTQVT*AMKARM
Trigger: CATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCAT...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp ACCTCAGGATGCATCCAAATCATTAACCTGATGCACCTTGGAAAGCTTTTGATTGTCCACGCATTTCTTTaGCACCGGGCACACAGCCAT +
Preference number: 5 (lower is better)
Translates to: TSGCIQIINLMHLGKLLIVHAFL*HRAHSH
Trigger: ATGGCTGTGTGCCCGGTGCAAAAGAAATGCGTGGAC...AATCAAAAGCTTTCCAAGGTGCATCAGGTTAATGATTTGGATGCATCCTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp GACTGTGGAAAATATATAAATTATCGCCCTACCCGCTGGGTACCGAGGTGCCACCTTATTGTTCTTCGTTaGCTTAAGAGCACCTCCTCT +
Preference number: 5 (lower is better)
Translates to: DCGKYINYRPTRWVPRCHLIVLR*LKSTSS
Trigger: AGAGGAGGTGCTCTTAAGCAAACGAAGAACAATAAG...GTGGCACCTCGGTACCCAGCGGGTAGGGCGATAATTTATATATTTTCCACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp CAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCACATGGGCCCACTTATaGTTCTTCGTTTGCTTAAGA +
Preference number: 5 (lower is better)
Translates to: QTLETRFTTVRDTPCHLCTWAHL*FFVCLR
Trigger: TCTTAAGCAAACGAAGAACAATAAGTGGGCCCATGT...GCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCACATGGGCCCACTTATaGTTCTTCGTTTGCTTAAGA +
Preference number: 5 (lower is better)
Translates to: GFRLTDIEWILLDSSLWATWAHL*FFVCLR
Trigger: TCTTAAGCAAACGAAGAACAATAAGTGGGCCCATGT...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp GACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTTCTGCCTACATCTATTaGTGTCCTTTCTGGGACATT +
Preference number: 5 (lower is better)
Translates to: DLSSHSMCDNMSFSNRSVSAYIY*CPFWDI
Trigger: AATGTCCCAGAAAGGACACAAATAGATGTAGGCAGA...AACGGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTGGACAAGGAATTCACTaGGCAGGTCCCCAAGTGGCA +
Preference number: 5 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIGQGIH*AGPQVA
Trigger: TGCCACTTGGGGACCTGCCAAGTGAATTCCTTGTCC...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp ATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTTCTTATAGATCCATTTACTaGCATGAACCCGTACGCAGC +
Preference number: 5 (lower is better)
Translates to: MSMTQVTLAMKARMGLISYRSIY*HEPVRS
Trigger: GCTGCGTACGGGTTCATGCAAGTAAATGGATCTATA...AGAAATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTCAGGAGCTCAGGCTATaGTATCCCCATCCTAAACAC +
Preference number: 5 (lower is better)
Translates to: YCRCCILNANDLSSHSMCQELRL*YPHPKH
Trigger: GTGTTTAGGATGGGGATACAATAGCCTGAGCTCCTG...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS TCA 90 bp GTGCTGTTTTCTAAGCCACAAACTGATCGCAAACAGGGAGAGATCTaGGTCTACCTAACATGGAGCCACATGATGCCACTGGAAAATCTT +
Preference number: 5 (lower is better)
Translates to: VLFSKPQTDRKQGEI*VYLTWSHMMPLENL
Trigger: AAGATTTTCCAGTGGCATCATGTGGCTCCATGTTAGGTAGACTCAGATCTCTCCCTGTTTGCGATCAGTTTGTGGCTTAGAAAACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489243.5
CDS GCA 90 bp AGAAGGAATACCATAACAACTTGCATGAACCCGTACGCAGCACTTTaGACAGGAAATAAGGAGACTTGTTCCATCCTCTTCAAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: RRNTITTCMNPYAAL*TGNKETCSILFKEG
Trigger: GCCTTCCTTGAAGAGGATGGAACAAGTCTCCTTATTTCCTGTGCAAAGTGCTGCGTACGGGTTCATGCAAGTTGTTATGGTATTCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AACAAACACTTTGACGATCATTGCGGTAAACTACAGGGGGAAATATCAACACCTGTGGTTAACTTAGGCTaGCTGGCGCGCATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: NKHFDDHCGKLQGEISTPVVNLG*LARIFL
Trigger: CAAGAAGATGCGCGCCAGCAAGCCTAAGTTAACCAC...AGGTGTTGATATTTCCCCCTGTAGTTTACCGCAATGATCGTCAAAGTGTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp AAAATACCAGCAGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGCCGGCCCAGGGAGATTaGGGAAATTTGGGAGACTTG +
Preference number: 5 (lower is better)
Translates to: KIPAAEILLMNISCCPLRPAQGD*GNLGDL
Trigger: CAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCGG...CCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCTGCTGGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CAA 90 bp GGCATCTTTAATTCACCATATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCCAATATTTGCCACTGTaGGCCAGCTGCCTGAACTCC +
Preference number: 5 (lower is better)
Translates to: GIFNSPYCRCCILNANDLQYLPL*ASCLNS
Trigger: GGAGTTCAGGCAGCTGGCCAACAGTGGCAAATATTG...GAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCCGTAATCCAAGTATCTaGGAGTACAATATTTGCCAC +
Preference number: 5 (lower is better)
Translates to: GFRLTDIEWILLDSSLWARNPSI*EYNICH
Trigger: GTGGCAAATATTGTACTCCAAGATACTTGGATTACG...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTAAATGCATCACACCCTaGGGAGCTGCTTGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPKCITP*GAAWEK
Trigger: TTTTTCCCAAGCAGCTCCCAAGGGTGTGATGCATTT...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATTGATGATGACTCAGGTGACTTaGGCCATGAAAGCTCGGATG +
Preference number: 5 (lower is better)
Translates to: KQHLKQWRRGCNFPNELMMTQVT*AMKARM
Trigger: CATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCAT...CATCAATTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp TGTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACAGCAATTCTTCATCACTaGGCGCCTGCTGCTTCACAA +
Preference number: 5 (lower is better)
Translates to: CIFGDQTLETRFTTVRDTAILHH*APAASQ
Trigger: TTGTGAAGCAGCAGGCGCCAAGTGATGAAGAATTGC...TGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp GAAAATGACAGATACAAAAGGGAAAGTCCAGGGTCTGACTCAATCAGGAGCTCATCATCCTGGCCACTGTaGCATTATACTCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: ENDRYKRESPGSDSIRSSSSWPL*HYTLAQ
Trigger: CTGAGCAAGAGTATAATGCAACAGTGGCCAGGATGA...TGAGCTCCTGATTGAGTCAGACCCTGGACTTTCCCTTTTGTATCTGTCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTTCATCCTGGCCACTGTaGCATTATACTCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPSSWPL*HYTLAQ
Trigger: CTGAGCAAGAGTATAATGCAACAGTGGCCAGGATGA...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp GCGTCCAATTCATTGGGTGTATTTTGTATTTTTGGTGACCAAACTCTGGAAACCTTGCTGCTATCTGGCTaGTGGTACGGCATGAGCAGA +
Preference number: 5 (lower is better)
Translates to: ASNSLGVFCIFGDQTLETLLLSG*WYGMSR
Trigger: TCTGCTCATGCCGTACCACAAGCCAGATAGCAGCAA...GGTTTCCAGAGTTTGGTCACCAAAAATACAAAATACACCCAATGAATTGGACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp CAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTGTCACCTATGCTCTTCAAGGAAGGCATaGGGTGGAGAATATTCTATA +
Preference number: 5 (lower is better)
Translates to: QTLETRFTTVRDTPCHLCSSRKA*GGEYSI
Trigger: TATAGAATATTCTCCACCCAATGCCTTCCTTGAAGA...GCATAGGTGACAGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCTCTTCAAGGAAGGCATaGGGTGGAGAATATTCTATA +
Preference number: 5 (lower is better)
Translates to: GFRLTDIEWILLDSSLWASSRKA*GGEYSI
Trigger: TATAGAATATTCTCCACCCAATGCCTTCCTTGAAGA...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGTCCACGCATTTCTTTaGCACCGGGCACACAGCCAT +
Preference number: 5 (lower is better)
Translates to: KIANALMVSLFAPGVLHRVHAFL*HRAHSH
Trigger: ATGGCTGTGTGCCCGGTGCAAAAGAAATGCGTGGAC...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AATGACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCCTTATTGTTCTTCGTTaGCTTAAGAGCACCTCCTCT +
Preference number: 5 (lower is better)
Translates to: NDLSSHSMCDNMSFSNRSLIVLR*LKSTSS
Trigger: AGAGGAGGTGCTCTTAAGCAAACGAAGAACAATAAG...GGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AATGACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCTCTGCCTACATCTATTaGTGTCCTTTCTGGGACATT +
Preference number: 5 (lower is better)
Translates to: NDLSSHSMCDNMSFSNRSSAYIY*CPFWDI
Trigger: AATGTCCCAGAAAGGACACAAATAGATGTAGGCAGA...GGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp GCGTCCAATTCATTGGGTGTATTTTGTATTTTTGGTGACCAAACTCTGGAAACCGCCTTGGACTTCACGTaGGGGTTGACCTTATGTCGA +
Preference number: 5 (lower is better)
Translates to: ASNSLGVFCIFGDQTLETALDFT*GLTLCR
Trigger: TCGACATAAGGTCAACCCCAACGTGAAGTCCAAGGC...GGTTTCCAGAGTTTGGTCACCAAAAATACAAAATACACCCAATGAATTGGACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTCGTTCAGTTGCTTTGTaGTGCAGCAAGAAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPRSVAL*CSKKEG
Trigger: TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACG...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AATGACCTCTCTTCCCACAGCATGTGTGATAACATGAGCTTCAGCAACAGGTCCATACGTTCAGTTGCTTaGTTGTGCAGCAAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: NDLSSHSMCDNMSFSNRSIRSVA*LCSKKE
Trigger: TTCCTTCTTGCTGCACAACAAAGCAACTGAACGTAT...GGACCTGTTGCTGAAGCTCATGTTATCACACATGCTGTGGGAAGAGAGGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS CCA 90 bp CCAAGTGGCATCTGCCAGCACTTACAAATCGAGCTTTCACTCTCTTaGGTAACTCTTCATCTAAAGTGTAGATGTCCTCTCTCTTCATTG +
Preference number: 5 (lower is better)
Translates to: PSGICQHLQIELSLS*VTLHLKCRCPLSSL
Trigger: CAATGAAGAGAGAGGACATCTACACTTTAGATGAAGAGTTACCCAAGAGAGTGAAAGCTCGATTTGTAAGTGCTGGCAGATGCCACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381306.7
ENST00000490806.5
CDS-3UTR CAA 90 bp ATTTCCTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAACTGGCGCGCATCTTCTaGTCCTTTGGACACAGGCAT +
Preference number: 5 (lower is better)
Translates to: ISCCPLRNYGSPKSTTKELARIF*SFGHRH
Trigger: ATGCCTGTGTCCAAAGGACAAGAAGATGCGCGCCAG...TTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CAA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGTGGTTAACTTAGGCTaGCTGGCGCGCATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: KIANALMVSLFAPGVLHRVVNLG*LARIFL
Trigger: CAAGAAGATGCGCGCCAGCAAGCCTAAGTTAACCAC...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp TGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAACACTTCGTGGTTAACTTAGGCTaGCTGGCGCGCATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: CCPLRNYGSPKSTTKEHFVVNLG*LARIFL
Trigger: CAAGAAGATGCGCGCCAGCAAGCCTAAGTTAACCAC...GAAGTGTTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CAA 90 bp CTGTACAAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCTATGCAAGGTATTTGTaGAACTCCCGGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: LYKGNTDSTRVNLISIHAYARYL*NSRNSS
Trigger: GGAGGAGTTCCGGGAGTTCAACAAATACCTTGCATA...GGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTTGTACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CAA 90 bp GATAAATTCTGCTCCACCTGCATCCTGCTAGCAGATGACTCTTCTTCTGAAGATATGTATGCAAGGTATTaGTTGAACTCCCGGAACTCC +
Preference number: 5 (lower is better)
Translates to: DKFCSTCILLADDSSSEDMYARY*LNSRNS
Trigger: GGAGTTCCGGGAGTTCAACAAATACCTTGCATACAT...ATCTTCAGAAGAAGAGTCATCTGCTAGCAGGATGCAGGTGGAGCAGAATTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTATGTATGCAAGGTATTaGTTGAACTCCCGGAACTCC +
Preference number: 5 (lower is better)
Translates to: YCRCCILNANDLSSHSMCMYARY*LNSRNS
Trigger: GGAGTTCCGGGAGTTCAACAAATACCTTGCATACAT...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTACAATATTTGCCACTGTaGGCCAGCTGCCTGAACTCC +
Preference number: 5 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLQYLPL*ASCLNS
Trigger: GGAGTTCAGGCAGCTGGCCAACAGTGGCAAATATTG...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp CTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCTGCTATACGTAATCCAAGTATCTaGGAGTACAATATTTGCCAC +
Preference number: 5 (lower is better)
Translates to: LLSGWRQLLEVLFSPSAIRNPSI*EYNICH
Trigger: GTGGCAAATATTGTACTCCAAGATACTTGGATTACG...TATAGCAGAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp CTGTACAAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCAAATGCATCACACCCTaGGGAGCTGCTTGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: LYKGNTDSTRVNLISIHAKCITP*GAAWEK
Trigger: TTTTTCCCAAGCAGCTCCCAAGGGTGTGATGCATTT...GGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTTGTACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CAA 90 bp AAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATTGATGAAATGCATCACACCCTaGGGAGCTGCTTGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: KQHLKQWRRGCNFPNELMKCITP*GAAWEK
Trigger: TTTTTCCCAAGCAGCTCCCAAGGGTGTGATGCATTT...CATCAATTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp CTGCTAAGTGGATGGCGCCAACTCTTAGAGGTTTTGTTCTCTCCCTCTGCTATAGAAATCAATGTCATCTaGTGGCGAAGAAATGCATCA +
Preference number: 5 (lower is better)
Translates to: LLSGWRQLLEVLFSPSAIEINVI*WRRNAS
Trigger: TGATGCATTTCTTCGCCACAAGATGACATTGATTTC...TATAGCAGAGGGAGAGAACAAAACCTCTAAGAGTTGGCGCCATCCACTTAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp GGTGTAACTTCTGAGACTCCTATTATAATGCCTCCATGCTACAGGAGACAACCTGCCTCCTGGGTTATCTaGTCAAAGGGAATACCATAT +
Preference number: 5 (lower is better)
Translates to: GVTSETPIIMPPCYRRQPASWVI*SKGIPY
Trigger: ATATGGTATTCCCTTTGACAAGATAACCCAGGAGGC...AGGTTGTCTCCTGTAGCATGGAGGCATTATAATAGGAGTCTCAGAAGTTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATTGCTGCTATCTGGCTaGTGGTACGGCATGAGCAGA +
Preference number: 5 (lower is better)
Translates to: KIANALMVSLFAPGVLHRLLLSG*WYGMSR
Trigger: TCTGCTCATGCCGTACCACAAGCCAGATAGCAGCAA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTATTGCTGCTATCTGGCTaGTGGTACGGCATGAGCAGA +
Preference number: 5 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLLLLSG*WYGMSR
Trigger: TCTGCTCATGCCGTACCACAAGCCAGATAGCAGCAA...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp TTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCCTTCTGCCTACATCTATTaGTGTCCTTTCTGGGACATT +
Preference number: 5 (lower is better)
Translates to: FLVTKLWKPDLPLSETHPSAYIY*CPFWDI
Trigger: AATGTCCCAGAAAGGACACAAATAGATGTAGGCAGA...AGGGTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCCTTGGACTTCACGTaGGGGTTGACCTTATGTCGA +
Preference number: 5 (lower is better)
Translates to: KIANALMVSLFAPGVLHRALDFT*GLTLCR
Trigger: TCGACATAAGGTCAACCCCAACGTGAAGTCCAAGGC...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp ACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAAAATTGCCATCGGGCCACTaGACTTGGACGACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: TDSTRVNLISIHAICVLKLPSGH*TWTTSP
Trigger: GGGAGAAGTCGTCCAAGTCAAGTGGCCCGATGGCAA...TTTTAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp GGATTCAGGCTGACAGACATAGAGTGGATTCTCTTAGATTCAAGCCTCTGGGCCCACAGTGAGCCTTCATaGTTATTGTTGTTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: GFRLTDIEWILLDSSLWAHSEPS*LLLLLL
Trigger: TAACAACAACAACAATAACAATGAAGGCTCACTGTG...GGCCCAGAGGCTTGAATCTAAGAGAATCCACTCTATGTCTGTCAGCCTGAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAACGTTCAGTTGCTTTGTaGTGCAGCAAGAAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNERSVAL*CSKKEG
Trigger: TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACG...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp TGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTGATATACGTTCAGTTGCTTaGTTGTGCAGCAAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: CRCCILNANDLSSHSMCDIRSVA*LCSKKE
Trigger: TTCCTTCTTGCTGCACAACAAAGCAACTGAACGTAT...ATCACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS CCA 90 bp ATTTTATTTTCAAGCACTCAGACATGCAACTTTCAGGCCAGGATCTaGATGACCCATCAGCTCAACCTTCTTCTCAGAAGCCTGAACATT +
Preference number: 5 (lower is better)
Translates to: ILFSSTQTCNFQARI*MTHQLNLLLRSLNI
Trigger: AATGTTCAGGCTTCTGAGAAGAAGGTTGAGCTGATGGGTCATCCAGATCCTGGCCTGAAAGTTGCATGTCTGAGTGCTTGAAAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480996.1
CDS-3UTR CAA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCTGGCGCGCATCTTCTaGTCCTTTGGACACAGGCAT +
Preference number: 5 (lower is better)
Translates to: LLLNTFNVASTNKIANALLARIF*SFGHRH
Trigger: ATGCCTGTGTCCAAAGGACAAGAAGATGCGCGCCAG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTGGAGATTTGGGAAATTaGGGAGACTTGTTCCGCACT +
Preference number: 5 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIGDLGN*GDLFRT
Trigger: AGTGCGGAACAAGTCTCCCAAATTTCCCAAATCTCC...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp TCACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGATATGCAAGGTATTTGTaGAACTCCCGGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: SPKLKIRSVALLCSKKEGYARYL*NSRNSS
Trigger: GGAGGAGTTCCGGGAGTTCAACAAATACCTTGCATA...TCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATTGATGATGTATGCAAGGTATTaGTTGAACTCCCGGAACTCC +
Preference number: 5 (lower is better)
Translates to: KQHLKQWRRGCNFPNELMMYARY*LNSRNS
Trigger: GGAGTTCCGGGAGTTCAACAAATACCTTGCATACAT...CATCAATTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AATACTGCTTCTGCTTTAAGGTGTCAGTATGATGCATCATATTTCCTGTTTTCCCAATATTTGCCACTGTaGGCCAGCTGCCTGAACTCC +
Preference number: 5 (lower is better)
Translates to: NTASALRCQYDASYFLFSQYLPL*ASCLNS
Trigger: GGAGTTCAGGCAGCTGGCCAACAGTGGCAAATATTG...GGAAAACAGGAAATATGATGCATCATACTGACACCTTAAAGCAGAAGCAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CAA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGACTTGGAGTACAATATTaGCCACTGTTGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KIANALMVSLFAPGVLHRLGVQY*PLLASC
Trigger: GCAGCTGGCCAACAGTGGCAAATATTGTACTCCAAG...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp ATACCAGCAGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGAATCTTGGAGTACAATATTaGCCACTGTTGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: IPAAEILLMNISCCPLRNLGVQY*PLLASC
Trigger: GCAGCTGGCCAACAGTGGCAAATATTGTACTCCAAG...ATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCTGCTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CAA 90 bp TTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAAATCACCTTGGAGTACAATATTaGCCACTGTTGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LIPMTIFEAVVGHVGLNHLGVQY*PLLASC
Trigger: GCAGCTGGCCAACAGTGGCAAATATTGTACTCCAAG...GTGATTTAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAAACATCCAAGACTGTATaGAGGCGAGCTATGTTCCAT +
Preference number: 5 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNETSKTV*RRAMFH
Trigger: ATGGAACATAGCTCGCCTCAATACAGTCTTGGATGT...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTAAATGCATCACACCCTaGGGAGCTGCTTGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIKCITP*GAAWEK
Trigger: TTTTTCCCAAGCAGCTCCCAAGGGTGTGATGCATTT...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAAGCCTCCTGGGTTATCTaGTCAAAGGGAATACCATAT +
Preference number: 5 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNEASWVI*SKGIPY
Trigger: ATATGGTATTCCCTTTGACAAGATAACCCAGGAGGC...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAATGACTCAGGTGACTTaGGCCATGAAAGCTCGGATG +
Preference number: 5 (lower is better)
Translates to: KIANALMVSLFAPGVLHRMTQVT*AMKARM
Trigger: CATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCAT...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp GAAAATGACAGATACAAAAGGGAAAGTCCAGGGTCTGACTCAATCAGGAGCTCACAACTCTTAGAGGTTTaGTTCTCTCCCTCTGCTATA +
Preference number: 5 (lower is better)
Translates to: ENDRYKRESPGSDSIRSSQLLEV*FSPSAI
Trigger: TATAGCAGAGGGAGAGAACAAAACCTCTAAGAGTTG...TGAGCTCCTGATTGAGTCAGACCCTGGACTTTCCCTTTTGTATCTGTCATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCAATTCTTCATCACTaGGCGCCTGCTGCTTCACAA +
Preference number: 5 (lower is better)
Translates to: KIANALMVSLFAPGVLHRAILHH*APAASQ
Trigger: TTGTGAAGCAGCAGGCGCCAAGTGATGAAGAATTGC...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp TGCTCAAGATGTTCTCCTGGTGTGTATTCTGAACTCAGGATTGGATACTGCCTCTCTTCAAGGAAGGCATaGGGTGGAGAATATTCTATA +
Preference number: 5 (lower is better)
Translates to: CSRCSPGVYSELRIGYCLSSRKA*GGEYSI
Trigger: TATAGAATATTCTCCACCCAATGCCTTCCTTGAAGA...GAGGCAGTATCCAATCCTGAGTTCAGAATACACACCAGGAGAACATCTTGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTGAATACCATAACAACTaGCATGAACCCGTACGCAGC +
Preference number: 5 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIEYHNN*HEPVRS
Trigger: GCTGCGTACGGGTTCATGCAAGTTGTTATGGTATTC...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp CACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGATGAATACCATAACAACTaGCATGAACCCGTACGCAGC +
Preference number: 5 (lower is better)
Translates to: HLNSKYVQLLCCAARRKDEYHNN*HEPVRS
Trigger: GCTGCGTACGGGTTCATGCAAGTTGTTATGGTATTC...ATCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp ACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAAAAGTCCACGCATTTCTTTaGCACCGGGCACACAGCCAT +
Preference number: 5 (lower is better)
Translates to: TDSTRVNLISIHAICVLKVHAFL*HRAHSH
Trigger: ATGGCTGTGTGCCCGGTGCAAAAGAAATGCGTGGAC...TTTTAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp GAAAATGACAGATACAAAAGGGAAAGTCCAGGGTCTGACTCAATCAGGAGCTCAACATGGGCCCACTTATaGTTCTTCGTTTGCTTAAGA +
Preference number: 5 (lower is better)
Translates to: ENDRYKRESPGSDSIRSSTWAHL*FFVCLR
Trigger: TCTTAAGCAAACGAAGAACAATAAGTGGGCCCATGT...TGAGCTCCTGATTGAGTCAGACCCTGGACTTTCCCTTTTGTATCTGTCATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp GTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACTCTGCCTACATCTATTaGTGTCCTTTCTGGGACATT +
Preference number: 5 (lower is better)
Translates to: VFLVTKLWKPDLPLSETHSAYIY*CPFWDI
Trigger: AATGTCCCAGAAAGGACACAAATAGATGTAGGCAGA...GTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGACCTTCTCGCAAGCCTaGGACTTCACGTTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: LLLNTFNVASTNKIANALTFSQA*DFTLGL
Trigger: CAACCCCAACGTGAAGTCCAAGGCTTGCGAGAAGGT...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp CATCTAGCATCATTTTCTTCATTGCTGCTATCTGGCTTGTGGTACGGCATGAGCCTACTAACAAACACTTaGACGATCATTGCGGTAAAC +
Preference number: 5 (lower is better)
Translates to: HLASFSSLLLSGLWYGMSLLTNT*TIIAVN
Trigger: GTTTACCGCAATGATCGTCAAAGTGTTTGTTAGTAG...GCTCATGCCGTACCACAAGCCAGATAGCAGCAATGAAGAAAATGATGCTAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp ATGAGCATGACTCAGGTGACTTTGGCCATGAAAGCTCGGATGGGTCTGATTTCTTTTCTCAAACTTTTCTaGAATGTAACCCACAGTGAG +
Preference number: 5 (lower is better)
Translates to: MSMTQVTLAMKARMGLISFLKLF*NVTHSE
Trigger: CTCACTGTGGGTTACATTCAAGAAAAGTTTGAGAAA...AGAAATCAGACCCATCCGAGCTTTCATGGCCAAAGTCACCTGAGTCATGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp TATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCTCTTCCCACAGCATGTGTTTGTTGTTGTTACTGTaGCTGTGTCTAGATTCCCAG +
Preference number: 5 (lower is better)
Translates to: YCRCCILNANDLSSHSMCLLLLL*LCLDSQ
Trigger: CTGGGAATCTAGACACAGCAACAGTAACAACAACAA...ACACATGCTGTGGGAAGAGAGGTCATTGGCATTCAAGATGCAACACCTACAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp ATGTGTGATAACATGAGCTTCAGCAACAGGTCCGTTCTCAACATCTGTCAGCCCCACAGTGAGCCTTCATaGTTATTGTTGTTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: MCDNMSFSNRSVLNICQPHSEPS*LLLLLL
Trigger: TAACAACAACAACAATAACAATGAAGGCTCACTGTG...GGGCTGACAGATGTTGAGAACGGACCTGTTGCTGAAGCTCATGTTATCACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATTGATGTGTAGGTGTTGCATCTaGAATGCCAATGACCTCTCT +
Preference number: 5 (lower is better)
Translates to: KQHLKQWRRGCNFPNELMCRCCI*NANDLS
Trigger: AGAGAGGTCATTGGCATTCAAGATGCAACACCTACA...CATCAATTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AAAATACCAGCAGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGGGAGATTTGGGAAATTaGGGAGACTTGTTCCGCACT +
Preference number: 5 (lower is better)
Translates to: KIPAAEILLMNISCCPLRGDLGN*GDLFRT
Trigger: AGTGCGGAACAAGTCTCCCAAATTTCCCAAATCTCC...CCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCTGCTGGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CAA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATATGCAAGGTATTTGTaGAACTCCCGGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: KIANALMVSLFAPGVLHRYARYL*NSRNSS
Trigger: GGAGGAGTTCCGGGAGTTCAACAAATACCTTGCATA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp CTGTTGTCCTTTGAGGAATTATGGATCACCCAAAAGCACAACAAAAGAACACTTTATGCAAGGTATTTGTaGAACTCCCGGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLSFEELWITQKHNKRTLYARYL*NSRNSS
Trigger: GGAGGAGTTCCGGGAGTTCAACAAATACCTTGCATA...AAGTGTTCTTTTGTTGTGCTTTTGGGTGATCCATAATTCCTCAAAGGACAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CAA 90 bp TGGAATGGAATCATCAGCCTCACTGGATATAGAAGGTACACTTCTATATGCATATATGCAAGGTATTTGTaGAACTCCCGGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: WNGIISLTGYRRYTSICIYARYL*NSRNSS
Trigger: GGAGGAGTTCCGGGAGTTCAACAAATACCTTGCATA...TATGCATATAGAAGTGTACCTTCTATATCCAGTGAGGCTGATGATTCCATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTATGTATGCAAGGTATTaGTTGAACTCCCGGAACTCC +
Preference number: 5 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIMYARY*LNSRNS
Trigger: GGAGTTCCGGGAGTTCAACAAATACCTTGCATACAT...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCAATATTTGCCACTGTaGGCCAGCTGCCTGAACTCC +
Preference number: 5 (lower is better)
Translates to: LLLNTFNVASTNKIANALQYLPL*ASCLNS
Trigger: GGAGTTCAGGCAGCTGGCCAACAGTGGCAAATATTG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp GTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACCGTAATCCAAGTATCTaGGAGTACAATATTTGCCAC +
Preference number: 5 (lower is better)
Translates to: VFLVTKLWKPDLPLSETHRNPSI*EYNICH
Trigger: GTGGCAAATATTGTACTCCAAGATACTTGGATTACG...GTGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CAA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAATAGCATACCAAGACTaGGGCTCTCCAAAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLIAYQD*GSPKWR
Trigger: TCTCCACTTTGGAGAGCCCAAGTCTTGGTATGCTAT...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp TTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAAATCACATAGCATACCAAGACTaGGGCTCTCCAAAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: LIPMTIFEAVVGHVGLNHIAYQD*GSPKWR
Trigger: TCTCCACTTTGGAGAGCCCAAGTCTTGGTATGCTAT...GTGATTTAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTGCCTCCTGGGTTATCTaGTCAAAGGGAATACCATAT +
Preference number: 5 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIASWVI*SKGIPY
Trigger: ATATGGTATTCCCTTTGACAAGATAACCCAGGAGGC...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp CACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGATGCTATACTGGGGACTTaGAAGCTATTTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: HLNSKYVQLLCCAARRKDAILGT*KLFLSP
Trigger: TGGAGAGAGAAATAGCTTCAAAGTCCCCAGTATAGC...ATCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp ACCTCAGGATGCATCCAAATCATTAACCTGATGCACCTTGGAAAGCTTTTGATTGCTATACTGGGGACTTaGAAGCTATTTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: TSGCIQIINLMHLGKLLIAILGT*KLFLSP
Trigger: TGGAGAGAGAAATAGCTTCAAAGTCCCCAGTATAGC...AATCAAAAGCTTTCCAAGGTGCATCAGGTTAATGATTTGGATGCATCCTGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp TGTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACACAACTCTTAGAGGTTTaGTTCTCTCCCTCTGCTATA +
Preference number: 5 (lower is better)
Translates to: CIFGDQTLETRFTTVRDTQLLEV*FSPSAI
Trigger: TATAGCAGAGGGAGAGAACAAAACCTCTAAGAGTTG...TGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp GCGTCCAATTCATTGGGTGTATTTTGTATTTTTGGTGACCAAACTCTGGAAACCTGTTGCATTATACTCTaGCTCAGCTGCGAAGTTAGG +
Preference number: 5 (lower is better)
Translates to: ASNSLGVFCIFGDQTLETCCIIL*LSCEVR
Trigger: CCTAACTTCGCAGCTGAGCAAGAGTATAATGCAACA...GGTTTCCAGAGTTTGGTCACCAAAAATACAAAATACACCCAATGAATTGGACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp CACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGATTGTTGCATTATACTCTaGCTCAGCTGCGAAGTTAGG +
Preference number: 5 (lower is better)
Translates to: HLNSKYVQLLCCAARRKDCCIIL*LSCEVR
Trigger: CCTAACTTCGCAGCTGAGCAAGAGTATAATGCAACA...ATCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATCATCCTGGCCACTGTaGCATTATACTCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: KIANALMVSLFAPGVLHRSSWPL*HYTLAQ
Trigger: CTGAGCAAGAGTATAATGCAACAGTGGCCAGGATGA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAGAATACCATAACAACTaGCATGAACCCGTACGCAGC +
Preference number: 5 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLEYHNN*HEPVRS
Trigger: GCTGCGTACGGGTTCATGCAAGTTGTTATGGTATTC...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp CTGTACAAGGGAAATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCACATGGGCCCACTTATaGTTCTTCGTTTGCTTAAGA +
Preference number: 5 (lower is better)
Translates to: LYKGNTDSTRVNLISIHATWAHL*FFVCLR
Trigger: TCTTAAGCAAACGAAGAACAATAAGTGGGCCCATGT...GGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATTTCCCTTGTACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATTGTTGTTGTTACTGTaGCTGTGTCTAGATTCCCAG +
Preference number: 5 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNELLLLL*LCLDSQ
Trigger: CTGGGAATCTAGACACAGCAACAGTAACAACAACAA...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATTGATGCGTAATCCAAGTATCTaGGAGTACAATATTTGCCAC +
Preference number: 5 (lower is better)
Translates to: KQHLKQWRRGCNFPNELMRNPSI*EYNICH
Trigger: GTGGCAAATATTGTACTCCAAGATACTTGGATTACG...CATCAATTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AAGCTTTGTCATCCTCAGTTTTTATGTCTTCTGTTACAGATGTACTTAAGCAGCAAATGCATCACACCCTaGGGAGCTGCTTGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: KLCHPQFLCLLLQMYLSSKCITP*GAAWEK
Trigger: TTTTTCCCAAGCAGCTCCCAAGGGTGTGATGCATTT...GCTGCTTAAGTACATCTGTAACAGAAGACATAAAAACTGAGGATGACAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp TGTATTTTTGGTGACCAAACTCTGGAAACCCGATTTACCACTGTCAGAGACACAGAAATCAATGTCATCTaGTGGCGAAGAAATGCATCA +
Preference number: 5 (lower is better)
Translates to: CIFGDQTLETRFTTVRDTEINVI*WRRNAS
Trigger: TGATGCATTTCTTCGCCACAAGATGACATTGATTTC...TGTGTCTCTGACAGTGGTAAATCGGGTTTCCAGAGTTTGGTCACCAAAAATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381309.8
CDS-3UTR CAA 90 bp TGGAATGGAATCATCAGCCTCACTGGATATAGAAGGTACACTTCTATATGCATAGCCTCCTGGGTTATCTaGTCAAAGGGAATACCATAT +
Preference number: 5 (lower is better)
Translates to: WNGIISLTGYRRYTSICIASWVI*SKGIPY
Trigger: ATATGGTATTCCCTTTGACAAGATAACCCAGGAGGC...TATGCATATAGAAGTGTACCTTCTATATCCAGTGAGGCTGATGATTCCATTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCTATACTGGGGACTTaGAAGCTATTTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: KIANALMVSLFAPGVLHRAILGT*KLFLSP
Trigger: TGGAGAGAGAAATAGCTTCAAAGTCCCCAGTATAGC...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCAACTCTTAGAGGTTTaGTTCTCTCCCTCTGCTATA +
Preference number: 5 (lower is better)
Translates to: NALMVSLFAPGVLHRAHIQLLEV*FSPSAI
Trigger: TATAGCAGAGGGAGAGAACAAAACCTCTAAGAGTTG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AACAAACACTTTGACGATCATTGCGGTAAACTACAGGGGGAAATATCAACACCTCAACTCTTAGAGGTTTaGTTCTCTCCCTCTGCTATA +
Preference number: 5 (lower is better)
Translates to: NKHFDDHCGKLQGEISTPQLLEV*FSPSAI
Trigger: TATAGCAGAGGGAGAGAACAAAACCTCTAAGAGTTG...AGGTGTTGATATTTCCCCCTGTAGTTTACCGCAATGATCGTCAAAGTGTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGGCACCTCCTCTCAAATaGCAGAGACAGCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: LLLNTFNVASTNKIANALAPPLK*QRQHSA
Trigger: AGCAGAATGCTGTCTCTGCAATTTGAGAGGAGGTGC...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAGCACCTCCTCTCAAATaGCAGAGACAGCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: NTDSTRVNLISIHAICVLAPPLK*QRQHSA
Trigger: AGCAGAATGCTGTCTCTGCAATTTGAGAGGAGGTGC...TAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTCTTATTGTTCTTCGTTaGCTTAAGAGCACCTCCTCT +
Preference number: 5 (lower is better)
Translates to: NALMVSLFAPGVLHRAHILIVLR*LKSTSS
Trigger: AGAGGAGGTGCTCTTAAGCAAACGAAGAACAATAAG...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp GGCATCTTTAATTCACCATATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCCTTATTGTTCTTCGTTaGCTTAAGAGCACCTCCTCT +
Preference number: 5 (lower is better)
Translates to: GIFNSPYCRCCILNANDLLIVLR*LKSTSS
Trigger: AGAGGAGGTGCTCTTAAGCAAACGAAGAACAATAAG...GAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGCACACATTACATGGGCCCACTTATaGTTCTTCGTTTGCTTAAGA +
Preference number: 5 (lower is better)
Translates to: NALMVSLFAPGVLHRAHITWAHL*FFVCLR
Trigger: TCTTAAGCAAACGAAGAACAATAAGTGGGCCCATGT...AATGTGTGCTCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCTTCGTGATGACCGTTaGACCCACGGAAATGACCTT +
Preference number: 5 (lower is better)
Translates to: LLLNTFNVASTNKIANALLRDDR*THGNDL
Trigger: AAGGTCATTTCCGTGGGTCAAACGGTCATCACGAAG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AATGAGAAACAGCATCTGAAACAGTGGCGGAGGGGATGTAACTTTCCTAATGAATCAAAATACGTTCAGTaGCTTTGTTGTGCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: NEKQHLKQWRRGCNFPNESKYVQ*LCCAAR
Trigger: TCTTGCTGCACAACAAAGCAACTGAACGTATTTTGA...TTCATTAGGAAAGTTACATCCCCTCCGCCACTGTTTCAGATGCTGTTTCTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTATGTAGGTGTTGCATCTaGAATGCCAATGACCTCTCT +
Preference number: 5 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLCRCCI*NANDLS
Trigger: AGAGAGGTCATTGGCATTCAAGATGCAACACCTACA...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGAATTATGGATCATGTATGCAAGGTATTaGTTGAACTCCCGGAACTCC +
Preference number: 5 (lower is better)
Translates to: SRNPTDEYFLLSFEELWIMYARY*LNSRNS
Trigger: GGAGTTCCGGGAGTTCAACAAATACCTTGCATACAT...GATCCATAATTCCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CAA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGATAGCATACCAAGACTaGGGCTCTCCAAAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: LLLNTFNVASTNKIANALIAYQD*GSPKWR
Trigger: TCTCCACTTTGGAGAGCCCAAGTCTTGGTATGCTAT...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp GGCATCTTTAATTCACCATATTGTAGGTGTTGCATCTTGAATGCCAATGACCTCGAAATCAATGTCATCTaGTGGCGAAGAAATGCATCA +
Preference number: 5 (lower is better)
Translates to: GIFNSPYCRCCILNANDLEINVI*WRRNAS
Trigger: TGATGCATTTCTTCGCCACAAGATGACATTGATTTC...GAGGTCATTGGCATTCAAGATGCAACACCTACAATATGGTGAATTAAAGATGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTACAACTCTTAGAGGTTTaGTTCTCTCCCTCTGCTATA +
Preference number: 5 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLQLLEV*FSPSAI
Trigger: TATAGCAGAGGGAGAGAACAAAACCTCTAAGAGTTG...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp CTGGATAGTGAGGTTATGAGTGATATGGGATTCCTTCATTATTCTTTTCCTTATTCATCCTGGCCACTGTaGCATTATACTCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: LDSEVMSDMGFLHYSFPYSSWPL*HYTLAQ
Trigger: CTGAGCAAGAGTATAATGCAACAGTGGCCAGGATGA...ATAAGGAAAAGAATAATGAAGGAATCCCATATCACTCATAACCTCACTATCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp CACCTAAACTCAAAATACGTTCAGTTGCTTTGTTGTGCAGCAAGAAGGAAGGATTCTTCAAGGAAGGCATaGGGTGGAGAATATTCTATA +
Preference number: 5 (lower is better)
Translates to: HLNSKYVQLLCCAARRKDSSRKA*GGEYSI
Trigger: TATAGAATATTCTCCACCCAATGCCTTCCTTGAAGA...ATCCTTCCTTCTTGCTGCACAACAAAGCAACTGAACGTATTTTGAGTTTAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGGACTTCACGTTGGGGTaGACCTTATGTCGAAAGCAT +
Preference number: 5 (lower is better)
Translates to: LLLNTFNVASTNKIANALDFTLG*TLCRKH
Trigger: ATGCTTTCGACATAAGGTCAACCCCAACGTGAAGTC...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AAAATACCAGCAGCAGAAATCCTACTGATGAATATTTCCTGTTGTCCTTTGAGGCGTAATCCAAGTATCTaGGAGTACAATATTTGCCAC +
Preference number: 5 (lower is better)
Translates to: KIPAAEILLMNISCCPLRRNPSI*EYNICH
Trigger: GTGGCAAATATTGTACTCCAAGATACTTGGATTACG...CCTCAAAGGACAACAGGAAATATTCATCAGTAGGATTTCTGCTGCTGGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CAA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGACATCCAAGACTGTATaGAGGCGAGCTATGTTCCAT +
Preference number: 5 (lower is better)
Translates to: LLLNTFNVASTNKIANALTSKTV*RRAMFH
Trigger: ATGGAACATAGCTCGCCTCAATACAGTCTTGGATGT...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp CTGGATAGTGAGGTTATGAGTGATATGGGATTCCTTCATTATTCTTTTCCTTATACATCCAAGACTGTATaGAGGCGAGCTATGTTCCAT +
Preference number: 5 (lower is better)
Translates to: LDSEVMSDMGFLHYSFPYTSKTV*RRAMFH
Trigger: ATGGAACATAGCTCGCCTCAATACAGTCTTGGATGT...ATAAGGAAAAGAATAATGAAGGAATCCCATATCACTCATAACCTCACTATCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438023.5
CDS-3UTR CAA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGAGAAATCAATGTCATCTaGTGGCGAAGAAATGCATCA +
Preference number: 5 (lower is better)
Translates to: KIANALMVSLFAPGVLHREINVI*WRRNAS
Trigger: TGATGCATTTCTTCGCCACAAGATGACATTGATTTC...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTAGAAATCAATGTCATCTaGTGGCGAAGAAATGCATCA +
Preference number: 5 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLEINVI*WRRNAS
Trigger: TGATGCATTTCTTCGCCACAAGATGACATTGATTTC...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGTGTTGCATTATACTCTaGCTCAGCTGCGAAGTTAGG +
Preference number: 5 (lower is better)
Translates to: LLLNTFNVASTNKIANALCCIIL*LSCEVR
Trigger: CCTAACTTCGCAGCTGAGCAAGAGTATAATGCAACA...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AAGATTGCAAATGCCTTGATGGTATCTTTGTTTGCTCCTGGTGTTTTACACAGATCTTCAAGGAAGGCATaGGGTGGAGAATATTCTATA +
Preference number: 5 (lower is better)
Translates to: KIANALMVSLFAPGVLHRSSRKA*GGEYSI
Trigger: TATAGAATATTCTCCACCCAATGCCTTCCTTGAAGA...TCTGTGTAAAACACCAGGAGCAAACAAAGATACCATCAAGGCATTTGCAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGTGTCCTCTCTCTTCATaGCTATCTGGGATCCATCTT +
Preference number: 5 (lower is better)
Translates to: LLLNTFNVASTNKIANALCPLSS*LSGIHL
Trigger: AAGATGGATCCCAGATAGCAATGAAGAGAGAGGACA...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AAGCTTTTGATTCCAATGACAATTTTTGAGGCTGTAGTAGGACACGTTGGACTATCAAAATACGTTCAGTaGCTTTGTTGTGCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: KLLIPMTIFEAVVGHVGLSKYVQ*LCCAAR
Trigger: TCTTGCTGCACAACAAAGCAACTGAACGTATTTTGA...TAGTCCAACGTGTCCTACTACAGCCTCAAAAATTGTCATTGGAATCAAAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536108.5
ENST00000543771.5
CDS-3UTR CAA 90 bp ACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTAAAACAACTCTTAGAGGTTTaGTTCTCTCCCTCTGCTATA +
Preference number: 5 (lower is better)
Translates to: TDSTRVNLISIHAICVLKQLLEV*FSPSAI
Trigger: TATAGCAGAGGGAGAGAACAAAACCTCTAAGAGTTG...TTTTAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGTCTGCCTACATCTATTaGTGTCCTTTCTGGGACATT +
Preference number: 5 (lower is better)
Translates to: LLLNTFNVASTNKIANALSAYIY*CPFWDI
Trigger: AATGTCCCAGAAAGGACACAAATAGATGTAGGCAGA...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGGCCTTGATGGTATCTTaGTTTGCTCCTGGTGTTTTA +
Preference number: 5 (lower is better)
Translates to: LLLNTFNVASTNKIANALALMVS*FAPGVL
Trigger: TAAAACACCAGGAGCAAACAAAGATACCATCAAGGC...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGCGTAATCCAAGTATCTaGGAGTACAATATTTGCCAC +
Preference number: 5 (lower is better)
Translates to: LLLNTFNVASTNKIANALRNPSI*EYNICH
Trigger: GTGGCAAATATTGTACTCCAAGATACTTGGATTACG...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS-3UTR CAA 90 bp AATACAGATAGCACACGGGTAAATCTCATTAGCATACATGCCATTTGTGTTTTATCTTCAAGGAAGGCATaGGGTGGAGAATATTCTATA +
Preference number: 5 (lower is better)
Translates to: NTDSTRVNLISIHAICVLSSRKA*GGEYSI
Trigger: TATAGAATATTCTCCACCCAATGCCTTCCTTGAAGA...TAAAACACAAATGGCATGTATGCTAATGAGATTTACCCGTGTGCTATCTGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS-3UTR CAA 90 bp ACTGCTTCTGCTTTAAGGTGTCAGTATGATGCATCATATTTCCTGTTTTCCAAAGATGAATATTTCCTGTaGTCCTTTGAGGAATTATGG +
Preference number: 5 (lower is better)
Translates to: TASALRCQYDASYFLFSKDEYFL*SFEELW
Trigger: CCATAATTCCTCAAAGGACAACAGGAAATATTCATC...TTTGGAAAACAGGAAATATGATGCATCATACTGACACCTTAAAGCAGAAGCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CAA 90 bp AATACTGCTTCTGCTTTAAGGTGTCAGTATGATGCATCATATTTCCTGTTTTCCTTATCTAGCTTCAGTTaGAAAAATACCAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: NTASALRCQYDASYFLFSLSSFS*KNTSSR
Trigger: TCTGCTGCTGGTATTTTTCAAACTGAAGCTAGATAA...GGAAAACAGGAAATATGATGCATCATACTGACACCTTAAAGCAGAAGCAGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401787.7
CDS-3UTR CAA 90 bp CTACTCCTGAATACTTTTAATGTTGCTTCTACTAACAAGATTGCAAATGCCTTGAAGATTGCAAATGCCTaGATGGTATCTTTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: LLLNTFNVASTNKIANALKIANA*MVSLFA
Trigger: AGCAAACAAAGATACCATCAAGGCATTTGCAATCTT...CAAGGCATTTGCAATCTTGTTAGTAGAAGCAACATTAAAAGTATTCAGGAGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381306.7
CDS GCA 72 bp CTGCGCACGCGCACAGGACCCCGGCCGCCCGATCACTaGGCCGCGCCTCACCCTCCCGTCGAGGGGGTGGGT +
Preference number: 6 (lower is better)
Translates to: LRTRTGPRPPDH*AAPHPPVEGVG
Trigger: ACCCACCCCCTCGACGGGAGGGTGAGGCGCGGCGCAGTGATCGGGCGGCCGGGGTCCTGTGCGCGTGCGCAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000401787.7
ENST00000438023.5
CDS TCA 72 bp CGGCTCTCCCTGCGCGAGGGCGCGCGCGCCGTCACGTaGCCGCTGGGGCCCGCACTTGGTGAGTCACGTGGG +
Preference number: 6 (lower is better)
Translates to: RLSLREGARAVT*PLGPALGESRG
Trigger: CCCACGTGACTCACCAAGTGCGGGCCCCAGCGGTCACGTGACGGCGCGCGCGCCCTCGCGCAGGGAGAGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381306.7
ENST00000401787.7
ENST00000438023.5
CDS CCA 72 bp GTCTGGCGCGCGGGTTGGGGCGAGAGCACGACTCGGTaGAGGAGGAAGAGAAGACAGTGGCCTCCGGCCCAG +
Preference number: 6 (lower is better)
Translates to: VWRAGWGESTTR*RRKRRQWPPAQ
Trigger: CTGGGCCGGAGGCCACTGTCTTCTCTTCCTCCTCCACCGAGTCGTGCTCTCGCCCCAACCCGCGCGCCAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000401787.7
ENST00000438023.5
ENST00000489243.5
CDS TCA 72 bp GCGCGCCGTCACGTGACCGCTGGGGCCCGCACTTGGTaGGTCACGTGGGCTTACAAACAGCTTAAAGGTGCC +
Preference number: 6 (lower is better)
Translates to: ARRHVTAGARTW*VTWAYKQLKGA
Trigger: GGCACCTTTAAGCTGTTTGTAAGCCCACGTGACTCACCAAGTGCGGGCCCCAGCGGTCACGTGACGGCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381306.7
ENST00000401787.7
ENST00000438023.5
CDS TCA 72 bp TGGGGTTCAGAGGACTTTCCACCTCGGCCACCTCCATaGTGGTTAGGGCAGTGTCTGGCGCGCGGGTTGGGG +
Preference number: 6 (lower is better)
Translates to: WGSEDFPPRPPP*WLGQCLARGLG
Trigger: CCCCAACCCGCGCGCCAGACACTGCCCTAACCATCATGGAGGTGGCCGAGGTGGAAAGTCCTCTGAACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000401787.7
ENST00000438023.5
ENST00000489243.5
ENST00000543771.5
CDS CCA 72 bp GGGCCACTTGACTTGGACGACTTCTCCCTCAGCAGGTaGGCCCAGCTTCAGACAGTCTCGGCTCACGATATC +
Preference number: 6 (lower is better)
Translates to: GPLDLDDFSLSR*AQLQTVSAHDI
Trigger: GATATCGTGAGCCGAGACTGTCTGAAGCTGGGCCCACCTGCTGAGGGAGAAGTCGTCCAAGTCAAGTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000466673.1
ENST00000490806.5
CDS TCA 72 bp GATTTGGGAAATTTGGGAGACTTGTTCCGCACTAGGTaGCAGCTGTTCGCTGCGCACGCGCACAGGACCCCG +
Preference number: 6 (lower is better)
Translates to: DLGNLGDLFRTR*QLFAAHAHRTP
Trigger: CGGGGTCCTGTGCGCGTGCGCAGCGAACAGCTGTCACCTAGTGCGGAACAAGTCTCCCAAATTTCCCAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000401787.7
ENST00000438023.5
CDS CAA 72 bp AATGACCGTGGTAAGGAGCGCATGGCCATCTCTGGCTaGGCTGCCACAACGTCAAGCATGAGGGCAGTGGCA +
Preference number: 6 (lower is better)
Translates to: NDRGKERMAISG*AATTSSMRAVA
Trigger: TGCCACTGCCCTCATGCTTGACGTTGTGGCAGCCAAGCCAGAGATGGCCATGCGCTCCTTACCACGGTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496464.1
CDS CCA 72 bp GACAGTGGCCTCCGGCCCAGGGAGATTTGGGAAATTTaGGAGACTTGTTCCGCACTAGGTGACAGCTGTTCG +
Preference number: 6 (lower is better)
Translates to: DSGLRPREIWEI*ETCSALGDSCS
Trigger: CGAACAGCTGTCACCTAGTGCGGAACAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCGGAGGCCACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000401787.7
ENST00000438023.5
CDS CCA 72 bp GGAAGAGAAGACAGTGGCCTCCGGCCCAGGGAGATTTaGGAAATTTGGGAGACTTGTTCCGCACTAGGTGAC +
Preference number: 6 (lower is better)
Translates to: GREDSGLRPREI*EIWETCSALGD
Trigger: GTCACCTAGTGCGGAACAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCGGAGGCCACTGTCTTCTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000401787.7
ENST00000438023.5
CDS CAA 72 bp TTTTGCTCCATAGAGTTTGCCATCGGGCCACTTGACTaGGACGACTTCTCCCTCAGCAGGTGGGCCCAGCTT +
Preference number: 6 (lower is better)
Translates to: FCSIEFAIGPLD*DDFSLSRWAQL
Trigger: AAGCTGGGCCCACCTGCTGAGGGAGAAGTCGTCCAAGTCAAGTGGCCCGATGGCAAACTCTATGGAGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000466673.1
ENST00000490806.5
CDS CAA 90 bp CGCTCTTGCTTTGGGCTCAACTTCCGCGCTGTGGTTAACTTAGGCTaGCTGGCGCGCATCTTCTTGTCCTTTGGACACAGGCATATCCCA +
Preference number: 6 (lower is better)
Translates to: RSCFGLNFRAVVNLG*LARIFLSFGHRHIP
Trigger: TGGGATATGCCTGTGTCCAAAGGACAAGAAGATGCGCGCCAGCAAGCCTAAGTTAACCACAGCGCGGAAGTTGAGCCCAAAGCAAGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381306.7
ENST00000401787.7
ENST00000438023.5
CDS TCA 72 bp CAAGCCATCCTGGTAGCAGAAGAGCAGTGGCAGCAGTaGCATGCCACTACACGTAACATGCAGATGAGCCCT +
Preference number: 6 (lower is better)
Translates to: QAILVAEEQWQQ*HATTRNMQMSP
Trigger: AGGGCTCATCTGCATGTTACGTGTAGTGGCATGTCACTGCTGCCACTGCTCTTCTGCTACCAGGATGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496464.1
CDS CAA 72 bp TTTGGGCTCAACTTCCGCGCTGTGGTTAACTTAGGCTaGCTGGCGCGCATCTTCTTGTCCTTTGGACACAGG +
Preference number: 6 (lower is better)
Translates to: FGLNFRAVVNLG*LARIFLSFGHR
Trigger: CCTGTGTCCAAAGGACAAGAAGATGCGCGCCAGCAAGCCTAAGTTAACCACAGCGCGGAAGTTGAGCCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381306.7
ENST00000401787.7
ENST00000438023.5
CDS CAA 90 bp TCTGCAACTGTAATACCGGGTGTTCCGATGCTTCGTGATGACCGTTaGACCCACGGAAATGACCTTCTCGCAAGCCTTGGACTTGTGGCC +
Preference number: 6 (lower is better)
Translates to: SATVIPGVPMLRDDR*THGNDLLASLGLVA
Trigger: GGCCACAAGTCCAAGGCTTGCGAGAAGGTCATTTCCGTGGGTCAAACGGTCATCACGAAGCATCGGAACACCCGGTATTACAGTTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420847.2
CDS TCA 72 bp AATATTTTGCTCCATAGAGTTTGCCATCGGGCCACTTaGCTTGGACGACTTCTCCCTCAGCAGGTGGGCCCA +
Preference number: 6 (lower is better)
Translates to: NILLHRVCHRAT*LGRLLPQQVGP
Trigger: TGGGCCCACCTGCTGAGGGAGAAGTCGTCCAAGTCAAGTGGCCCGATGGCAAACTCTATGGAGCAAAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000466673.1
ENST00000490806.5
CDS TCA 72 bp TGGCCATCTCTGGCTTGGCTGCCACAACGTCAAGCATaGGGGCAGTGGCATAGATCTGACATTAAGCATCTC +
Preference number: 6 (lower is better)
Translates to: WPSLAWLPQRQA*GQWHRSDIKHL
Trigger: GAGATGCTTAATGTCAGATCTATGCCACTGCCCTCATGCTTGACGTTGTGGCAGCCAAGCCAGAGATGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496464.1
CDS GCA 72 bp CATCTTCTCTCTTCCAACCCAAGCTGCTCTGTGGCCTaGAGCGATGTATGCAGACTACTGTCTCTTCTGGCA +
Preference number: 6 (lower is better)
Translates to: HLLSSNPSCSVA*SDVCRLLSLLA
Trigger: TGCCAGAAGAGACAGTAGTCTGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGAGAGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS CCA 72 bp TTGTGTCCTTTCTGGGACATTAGTGAATCGAACTTCTaGGACCGCAACGGCGCACATGACATGGGCCCACTT +
Preference number: 6 (lower is better)
Translates to: LCPFWDISESNF*DRNGAHDMGPL
Trigger: AAGTGGGCCCATGTCATGTGCGCCGTTGCGGTCCCAGAAGTTCGATTCACTAATGTCCCAGAAAGGACACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000536108.5
ENST00000543771.5
CDS CCA 72 bp CCCTTCATCTTCTCTCTTCCAACCCAAGCTGCTCTGTaGCCTGCAGCGATGTATGCAGACTACTGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: PFIFSLPTQAAL*PAAMYADYCLF
Trigger: GAAGAGACAGTAGTCTGCATACATCGCTGCAGGCCACAGAGCAGCTTGGGTTGGAAGAGAGAAGATGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381309.8
ENST00000428870.6
CDS CCA 72 bp CCCACGGAAATGACCTTCTCGCAAGCCTTGGACTTGTaGCCCAGTTCACATAAGATTGTAGCACCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: PTEMTFSQALDL*PSSHKIVAPAA
Trigger: TGCTGCTGGTGCTACAATCTTATGTGAACTGGGCCACAAGTCCAAGGCTTGCGAGAAGGTCATTTCCGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420847.2
CDS CAA 72 bp GTAATACCGGGTGTTCCGATGCTTCGTGATGACCGTTaGACCCACGGAAATGACCTTCTCGCAAGCCTTGGA +
Preference number: 6 (lower is better)
Translates to: VIPGVPMLRDDR*THGNDLLASLG
Trigger: TCCAAGGCTTGCGAGAAGGTCATTTCCGTGGGTCAAACGGTCATCACGAAGCATCGGAACACCCGGTATTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000466673.1
ENST00000490806.5
CDS CAA 90 bp AACTTCCGCGCTGTGGTTAACTTAGGCTTGCTGGCGCGCATCTTCTaGTCCTTTGGACACAGGCATATCCCATTCTTTCCGGAGGGGAAA +
Preference number: 6 (lower is better)
Translates to: NFRAVVNLGLLARIF*SFGHRHIPFFPEGK
Trigger: TTTCCCCTCCGGAAAGAATGGGATATGCCTGTGTCCAAAGGACAAGAAGATGCGCGCCAGCAAGCCTAAGTTAACCACAGCGCGGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381306.7
ENST00000401787.7
ENST00000438023.5
CDS CAA 90 bp TCCAAAATATTTTGCTCCATAGAGTTTGCCATCGGGCCACTTGACTaGGACGACTTCTCCCTCAGCAGGTGGGCCCAGCTTCAGACAGTC +
Preference number: 6 (lower is better)
Translates to: SKIFCSIEFAIGPLD*DDFSLSRWAQLQTV
Trigger: GACTGTCTGAAGCTGGGCCCACCTGCTGAGGGAGAAGTCGTCCAAGTCAAGTGGCCCGATGGCAAACTCTATGGAGCAAAATATTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000466673.1
ENST00000490806.5
CDS CAA 90 bp TCTGCAACTGTAATACCGGGTGTTCCGATGCTTCGTGATGACCGTTaGACCCACGGAAATGACCTTCTCGCAAGCCTTGGACTTCACGTT +
Preference number: 6 (lower is better)
Translates to: SATVIPGVPMLRDDR*THGNDLLASLGLHV
Trigger: AACGTGAAGTCCAAGGCTTGCGAGAAGGTCATTTCCGTGGGTCAAACGGTCATCACGAAGCATCGGAACACCCGGTATTACAGTTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000428870.6
CDS CAA 90 bp TCTGCAACTGTAATACCGGGTGTTCCGATGCTTCGTGATGACCGTTaGACCCACGGAAATGACCTTCTCGCAAGCCTTGGACTTCTCTTC +
Preference number: 6 (lower is better)
Translates to: SATVIPGVPMLRDDR*THGNDLLASLGLLF
Trigger: GAAGAGAAGTCCAAGGCTTGCGAGAAGGTCATTTCCGTGGGTCAAACGGTCATCACGAAGCATCGGAACACCCGGTATTACAGTTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490806.5
CDS GCA 72 bp TGCAGAGACAGCATTCTGCTGTCCACGCATTTCTTTTaGACCGGGCACACAGCCATCCATCACAGATCTCAT +
Preference number: 6 (lower is better)
Translates to: CRDSILLSTHFF*TGHTAIHHRSH
Trigger: ATGAGATCTGTGATGGATGGCTGTGTGCCCGGTGCAAAAGAAATGCGTGGACAGCAGAATGCTGTCTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000536108.5
ENST00000543771.5
CDS CCA 72 bp GGTGAGGACAAGGAATTCACTTGGCAGGTCCCCAAGTaGCATCTGCCAGCACTTACAAATCGAGCTTTCACT +
Preference number: 6 (lower is better)
Translates to: GEDKEFTWQVPK*HLPALTNRAFT
Trigger: AGTGAAAGCTCGATTTGTAAGTGCTGGCAGATGCCACTTGGGGACCTGCCAAGTGAATTCCTTGTCCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381306.7
ENST00000490806.5
CDS CAA 72 bp TTGCAGAGACAGCATTCTGCTGTCCACGCATTTCTTTaGCACCGGGCACACAGCCATCCATCACAGATCTCA +
Preference number: 6 (lower is better)
Translates to: LQRQHSAVHAFL*HRAHSHPSQIS
Trigger: TGAGATCTGTGATGGATGGCTGTGTGCCCGGTGCAAAAGAAATGCGTGGACAGCAGAATGCTGTCTCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000536108.5
ENST00000543771.5
CDS GCA 72 bp CCTCCTCTGCAGCCATGCTTTTACTTCAGGGGTGGATaGTGGAGTAGGCTTCGTGTGATCAATGGTGTATAT +
Preference number: 6 (lower is better)
Translates to: PPLQPCFYFRGG*WSRLRVINGVY
Trigger: ATATACACCATTGATCACACGAAGCCTACTCCAGCATCCACCCCTGAAGTAAAAGCATGGCTGCAGAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000428870.6
ENST00000438023.5
ENST00000536108.5
ENST00000543771.5
CDS GCA 72 bp ACAAGGAATTCACTTGGCAGGTCCCCAAGTGGCATCTaGCAGCACTTACAAATCGAGCTTTCACTCTCTTGG +
Preference number: 6 (lower is better)
Translates to: TRNSLGRSPSGI*QHLQIELSLSW
Trigger: CCAAGAGAGTGAAAGCTCGATTTGTAAGTGCTGGCAGATGCCACTTGGGGACCTGCCAAGTGAATTCCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381306.7
ENST00000490806.5
CDS GCA 72 bp AACATGCAGATGAGCCCTATCTCATATCAAAGAGGCTaGCATCTTCCTCGTCAACACAGTACTGCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: NMQMSPISYQRG*HLPRQHSTAGW
Trigger: CCAGCCTGCAGTACTGTGTTGACGAGGAAGATGGCAGCCTCTTTGATATGAGATAGGGCTCATCTGCATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496464.1
CDS CCA 72 bp TCAAGCACTCAGACATGCAACTTTCAGGCCAGGATCTaGATGACCCATCAGCTCAACCTTCTTCTCAGAAGC +
Preference number: 6 (lower is better)
Translates to: SSTQTCNFQARI*MTHQLNLLLRS
Trigger: GCTTCTGAGAAGAAGGTTGAGCTGATGGGTCATCCAGATCCTGGCCTGAAAGTTGCATGTCTGAGTGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480996.1
CDS CAA 90 bp TCTGCAACTGTAATACCGGGTGTTCCGATGCTTCGTGATGACCGTTaGACCCACGGAAATGACCTTCTCGCAAGCCTTGGACTTCTAAAA +
Preference number: 6 (lower is better)
Translates to: SATVIPGVPMLRDDR*THGNDLLASLGLLK
Trigger: TTTTAGAAGTCCAAGGCTTGCGAGAAGGTCATTTCCGTGGGTCAAACGGTCATCACGAAGCATCGGAACACCCGGTATTACAGTTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466673.1
CDS TCA 72 bp TCTAAGCCACAAACTGATCGCAAACAGGGAGAGATCTaGGTCTACCTAACATGGAGCCACATGATGCCACTG +
Preference number: 6 (lower is better)
Translates to: SKPQTDRKQGEI*VYLTWSHMMPL
Trigger: CAGTGGCATCATGTGGCTCCATGTTAGGTAGACTCAGATCTCTCCCTGTTTGCGATCAGTTTGTGGCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489243.5
CDS GCA 72 bp GCGCACATGACATGGGCCCACTTATTGTTCTTCGTTTaGTTAAGAGCACCTCCTCTCAAATTGCAGAGACAG +
Preference number: 6 (lower is better)
Translates to: AHMTWAHLLFFV*LRAPPLKLQRQ
Trigger: CTGTCTCTGCAATTTGAGAGGAGGTGCTCTTAAGCAAACGAAGAACAATAAGTGGGCCCATGTCATGTGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000536108.5
ENST00000543771.5
CDS GCA 72 bp ATAACGGAGGGAAAGCACACATGGAACAGCCTATATTaGATTCAAGCCATCCTGGTAGCAGAAGAGCAGTGG +
Preference number: 6 (lower is better)
Translates to: ITEGKHTWNSLY*IQAILVAEEQW
Trigger: CCACTGCTCTTCTGCTACCAGGATGGCTTGAATGCAATATAGGCTGTTCCATGTGTGCTTTCCCTCCGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496464.1
CDS CCA 72 bp CCTCTGCAGCCATGCTTTTACTTCAGGGGTGGATGCTaGAGTAGGCTTCGTGTGATCAATGGTGTATATATC +
Preference number: 6 (lower is better)
Translates to: PLQPCFYFRGGC*SRLRVINGVYI
Trigger: GATATATACACCATTGATCACACGAAGCCTACTCCAGCATCCACCCCTGAAGTAAAAGCATGGCTGCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000428870.6
ENST00000438023.5
ENST00000536108.5
ENST00000543771.5
CDS CAA 72 bp GGCGCACATGACATGGGCCCACTTATTGTTCTTCGTTaGCTTAAGAGCACCTCCTCTCAAATTGCAGAGACA +
Preference number: 6 (lower is better)
Translates to: GAHDMGPLIVLR*LKSTSSQIAET
Trigger: TGTCTCTGCAATTTGAGAGGAGGTGCTCTTAAGCAAACGAAGAACAATAAGTGGGCCCATGTCATGTGCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000536108.5
ENST00000543771.5
CDS CAA 72 bp ACTGAGGAAGGGAGGGCACATCTTACCACGTTGGGGTaGACCTTATGTCGAAAGCATGTAATGTTCACCACA +
Preference number: 6 (lower is better)
Translates to: TEEGRAHLTTLG*TLCRKHVMFTT
Trigger: TGTGGTGAACATTACATGCTTTCGACATAAGGTCAACCCCAACGTGGTAAGATGTGCCCTCCCTTCCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495890.1
CDS CAA 72 bp CTTAGCACTGAGGAAGGGAGGGCACATCTTACCACGTaGGGGTTGACCTTATGTCGAAAGCATGTAATGTTC +
Preference number: 6 (lower is better)
Translates to: LSTEEGRAHLTT*GLTLCRKHVMF
Trigger: GAACATTACATGCTTTCGACATAAGGTCAACCCCAACGTGGTAAGATGTGCCCTCCCTTCCTCAGTGCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495890.1
CDS CAA 72 bp CATAACGGAGGGAAAGCACACATGGAACAGCCTATATaGCATTCAAGCCATCCTGGTAGCAGAAGAGCAGTG +
Preference number: 6 (lower is better)
Translates to: HNGGKAHMEQPI*HSSHPGSRRAV
Trigger: CACTGCTCTTCTGCTACCAGGATGGCTTGAATGCAATATAGGCTGTTCCATGTGTGCTTTCCCTCCGTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496464.1
CDS CAA 90 bp AAGAAGTTTCATAACGGAGGGAAAGCACACATGGAACAGCCTATATaGCATTCAAGCCATCCTGGTAGCAGAAGAGCAGTGGCAGCAGTG +
Preference number: 6 (lower is better)
Translates to: KKFHNGGKAHMEQPI*HSSHPGSRRAVAAV
Trigger: CACTGCTGCCACTGCTCTTCTGCTACCAGGATGGCTTGAATGCAATATAGGCTGTTCCATGTGTGCTTTCCCTCCGTTATGAAACTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496464.1
CDS CAA 90 bp CTGGATGACCCATCAGCTCAACCTTCTTCTCAGAAGCCTGAACATTaGCCAGGTTACAACGCACAGGAAGAAACTCATCATATATGCTCC +
Preference number: 6 (lower is better)
Translates to: LDDPSAQPSSQKPEH*PGYNAQEETHHICS
Trigger: GGAGCATATATGATGAGTTTCTTCCTGTGCGTTGTAACCTGGCAAATGTTCAGGCTTCTGAGAAGAAGGTTGAGCTGATGGGTCATCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480996.1
CDS TCA 72 bp TGCCACACTCTTCTTCAACCACATCCAAGACTGTATTaGGGCGAGCTATGTTCCATTCATCCACACCCTCAT +
Preference number: 6 (lower is better)
Translates to: CHTLLQPHPRLY*GELCSIHPHPH
Trigger: ATGAGGGTGTGGATGAATGGAACATAGCTCGCCTCAATACAGTCTTGGATGTGGTTGAAGAAGAGTGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000438023.5
ENST00000489243.5
ENST00000536108.5
ENST00000543771.5
CDS TCA 72 bp TTCCTGCAAGTGCAAGTTCTCCGAACAGCATCTTTCTaGAACGGTGAAGGGCTGATGGTAAACAAGCCAAGA +
Preference number: 6 (lower is better)
Translates to: FLQVQVLRTASF*NGEGLMVNKPR
Trigger: TCTTGGCTTGTTTACCATCAGCCCTTCACCGTTTCAGAAAGATGCTGTTCGGAGAACTTGCACTTGCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428870.6
CDS TCA 72 bp AGTGCAAGTTCTCCGAACAGCATCTTTCTGAAACGGTaGAGGGCTGATGGTAAACAAGCCAAGACGGTTTTA +
Preference number: 6 (lower is better)
Translates to: SASSPNSIFLKR*RADGKQAKTVL
Trigger: TAAAACCGTCTTGGCTTGTTTACCATCAGCCCTTCACCGTTTCAGAAAGATGCTGTTCGGAGAACTTGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428870.6
CDS GCA 72 bp ACCATAACAACTTGCATGAACCCGTACGCAGCACTTTaGACAGGAAATAAGGAGACTTGTTCCATCCTCTTC +
Preference number: 6 (lower is better)
Translates to: TITTCMNPYAAL*TGNKETCSILF
Trigger: GAAGAGGATGGAACAAGTCTCCTTATTTCCTGTGCAAAGTGCTGCGTACGGGTTCATGCAAGTTGTTATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000536108.5
ENST00000543771.5
CDS CAA 72 bp CCATCAGCTCAACCTTCTTCTCAGAAGCCTGAACATTaGCCAGGTTACAACGCACAGGAAGAAACTCATCAT +
Preference number: 6 (lower is better)
Translates to: PSAQPSSQKPEH*PGYNAQEETHH
Trigger: ATGATGAGTTTCTTCCTGTGCGTTGTAACCTGGCAAATGTTCAGGCTTCTGAGAAGAAGGTTGAGCTGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480996.1
CDS GCA 72 bp CATCAGCTCAACCTTCTTCTCAGAAGCCTGAACATTTaGCAGGTTACAACGCACAGGAAGAAACTCATCATA +
Preference number: 6 (lower is better)
Translates to: HQLNLLLRSLNI*QVTTHRKKLII
Trigger: TATGATGAGTTTCTTCCTGTGCGTTGTAACCTGGCAAATGTTCAGGCTTCTGAGAAGAAGGTTGAGCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480996.1
CDS CCA 72 bp ACAGGAAGAAGTTTCATAACGGAGGGAAAGCACACATaGAACAGCCTATATTGCATTCAAGCCATCCTGGTA +
Preference number: 6 (lower is better)
Translates to: TGRSFITEGKHT*NSLYCIQAILV
Trigger: TACCAGGATGGCTTGAATGCAATATAGGCTGTTCCATGTGTGCTTTCCCTCCGTTATGAAACTTCTTCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496464.1
CDS CAA 72 bp TTGTTCTTCGTTTGCTTAAGAGCACCTCCTCTCAAATaGCAGAGACAGCATTCTGCTGTCCACGCATTTCTT +
Preference number: 6 (lower is better)
Translates to: LFFVCLRAPPLK*QRQHSAVHAFL
Trigger: AAGAAATGCGTGGACAGCAGAATGCTGTCTCTGCAATTTGAGAGGAGGTGCTCTTAAGCAAACGAAGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000536108.5
ENST00000543771.5
CDS CCA 72 bp TTCTTCAATACTGATGGAGAAATCAATGTCATCTTGTaGCGAAGAAATGCATCACACCCTTGGGAGCTGCTT +
Preference number: 6 (lower is better)
Translates to: FFNTDGEINVIL*RRNASHPWELL
Trigger: AAGCAGCTCCCAAGGGTGTGATGCATTTCTTCGCCACAAGATGACATTGATTTCTCCATCAGTATTGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000438023.5
ENST00000489243.5
ENST00000536108.5
ENST00000543771.5
CDS CAA 90 bp TCAATAGAAATGCCACACTCTTCTTCAACCACATCCAAGACTGTATaGAGGCGAGCTATGTTCCATTCATCCACACCCTCATCATATATG +
Preference number: 6 (lower is better)
Translates to: SIEMPHSSSTTSKTV*RRAMFHSSTPSSYM
Trigger: CATATATGATGAGGGTGTGGATGAATGGAACATAGCTCGCCTCAATACAGTCTTGGATGTGGTTGAAGAAGAGTGTGGCATTTCTATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000438023.5
ENST00000489243.5
ENST00000536108.5
ENST00000543771.5
CDS TCA 72 bp ATCTTCAAACTCAACCTGGTACATGTGGGCAATATTTaGTCCAAAATATTTTGCTCCATAGAGTTTGCCATC +
Preference number: 6 (lower is better)
Translates to: IFKLNLVHVGNI*SKIFCSIEFAI
Trigger: GATGGCAAACTCTATGGAGCAAAATATTTTGGATCAAATATTGCCCACATGTACCAGGTTGAGTTTGAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000466673.1
ENST00000490806.5
CDS GCA 72 bp AACACACGTCGCATCAAATTACCTATCAGGGTAAATTaGTCCACATTAATCTCAAAACAGACAAATTCAGCT +
Preference number: 6 (lower is better)
Translates to: NTRRIKLPIRVN*STLISKQTNSA
Trigger: AGCTGAATTTGTCTGTTTTGAGATTAATGTGGAGCAATTTACCCTGATAGGTAATTTGATGCGACGTGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489243.5
CDS CAA 72 bp CATCTTCAAACTCAACCTGGTACATGTGGGCAATATTaGATCCAAAATATTTTGCTCCATAGAGTTTGCCAT +
Preference number: 6 (lower is better)
Translates to: HLQTQPGTCGQY*IQNILLHRVCH
Trigger: ATGGCAAACTCTATGGAGCAAAATATTTTGGATCAAATATTGCCCACATGTACCAGGTTGAGTTTGAAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381306.7
ENST00000381309.8
ENST00000420847.2
ENST00000428870.6
ENST00000466673.1
ENST00000490806.5