RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KDM4A (Homo sapiens)

Ensembl gene IDs: ENSG00000066135

Ensembl transcript IDs: ENST00000372396.4, ENST00000472265.1, ENST00000481296.1, ENST00000485249.1

Found 326 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACAGCATTCCAGTGCTCAGCCCCTCAGCTGGGAGATCAGCGACTaGTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGA +
Preference number: 1 (lower is better)
Translates to: PQHSSAQPLSWEISD*CHVPRNGSSFHYSG
Trigger: TCCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCAGCTGAGGGGCTGAGCACTGGAATGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR CCA 90 bp GCCCCTCAGCTGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATaGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAG +
Preference number: 1 (lower is better)
Translates to: APQLGDQRLLPRAQK*LVLSLQRNAMRVGE
Trigger: CTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCAGCTGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR GCA 90 bp CCAGTGCTCAGCCCCTCAGCTGGGAGATCAGCGACTGCTGCCACGTaGCCAGAAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAG +
Preference number: 1 (lower is better)
Translates to: PVLSPSAGRSATAAT*PEMARPFTTAECNE
Trigger: CTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCAGCTGAGGGGCTGAGCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR GCA 90 bp CAGCATTCCAGTGCTCAGCCCCTCAGCTGGGAGATCAGCGACTGCTaGCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGAATG +
Preference number: 1 (lower is better)
Translates to: QHSSAQPLSWEISDC*HVPRNGSSFHYSGM
Trigger: CATTCCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCAGCTGAGGGGCTGAGCACTGGAATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR GCA 90 bp ACAAAGAGGTGGCATCAGCTCCTTAGCATCTCAATACTGCAGCTTTaGCAGCACTGTCTTGAGACGGTTCCAGGCCTGGACAGATGCCAC +
Preference number: 1 (lower is better)
Translates to: TKRWHQLLSISILQL*QHCLETVPGLDRCH
Trigger: GTGGCATCTGTCCAGGCCTGGAACCGTCTCAAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCACCTCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR TCA 90 bp GGGAAGTATTATAAATCTGATTCTTGTATACACAGGGTATTGGTGTaGAGCCCTCCAATCCTGGGCCCAGGCAAACAAATTCTTGAGGAG +
Preference number: 1 (lower is better)
Translates to: GKYYKSDSCIHRVLV*SPPILGPGKQILEE
Trigger: CTCCTCAAGAATTTGTTTGCCTGGGCCCAGGATTGGAGGGCTTCACACCAATACCCTGTGTATACAAGAATCAGATTTATAATACTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR CCA 90 bp AACATGCTTTTCATAGAGGGTACCATTCACATCTGCACCATAGATTaGAGGATTGAATGTAAGATTTTTCCAGTATTTCCGCTCGAGCTC +
Preference number: 1 (lower is better)
Translates to: NMLFIEGTIHICTID*RIECKIFPVFPLEL
Trigger: GAGCTCGAGCGGAAATACTGGAAAAATCTTACATTCAATCCTCCAATCTATGGTGCAGATGTGAATGGTACCCTCTATGAAAAGCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485249.1
3UTR-3UTR CCA 90 bp GCCAGGGGCTGGCAGAAGCTGGTCCAGACCAAACATACACGCACGCACGCACGCATGTCTGCTGTGCTGTaGAACCCAGAGTGCTCTTGC +
Preference number: 2 (lower is better)
Translates to: ARGWQKLVQTKHTRTHARMSAVL*NPECSC
Trigger: GCAAGAGCACTCTGGGTTCCACAGCACAGCAGACAT...GCGTGCGTGCGTGCGTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR CCA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTGCTCAGCCCCTCAGCTaGGAGATCAGCGACTGCTGC +
Preference number: 2 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSAQPLS*EISDCC
Trigger: GCAGCAGTCGCTGATCTCCCAGCTGAGGGGCTGAGC...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR TCA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTTCCAGCCAGCATAGTTaGCCCCTCTATGGACTGGGG +
Preference number: 2 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSSSQHS*PLYGLG
Trigger: CCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGA...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR CCA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACGTGCTCTTGCCTGGATaGCTGAGAATCCCTTGGACC +
Preference number: 2 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYVLLPG*LRIPWT
Trigger: GGTCCAAGGGATTCTCAGCCATCCAGGCAAGAGCAC...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR TCA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTTGCAATGAGGGTGGGTaGGAAGATGATGGGTCGGTT +
Preference number: 2 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSCNEGG*EDDGSV
Trigger: AACCGACCCATCATCTTCTCACCCACCCTCATTGCA...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR GCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCGAGATCAGCGACTGCTaGCACGTGCCCAGAAATGGC +
Preference number: 2 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGEISDC*HVPRNG
Trigger: GCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTC...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR GCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCATGGACTGGGGCCAGTaGAGCCACAGCATTCCAGTG +
Preference number: 2 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGMDWGQ*SHSIPV
Trigger: CACTGGAATGCTGTGGCTGCACTGGCCCCAGTCCAT...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR CCA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTCCACGTGCCCAGAAATaGCTCGTCCTTTCACTACAG +
Preference number: 2 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSPRAQK*LVLSLQ
Trigger: CTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGG...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR TCA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGTCTTGCCTGGATGGCTaGGAATCCCTTGGACCCTGG +
Preference number: 2 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMSCLDG*ESLGPW
Trigger: CCAGGGTCCAAGGGATTCTCAGCCATCCAGGCAAGA...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR CCA 90 bp CTTTGGCGAGGCGTTCCAACCGCTTTCCATGCTCAGGTGGAACAGAGTACCAGGATCATAGGATGCTCGTaGCTTCCACTCTTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: LWRGVPTAFHAQVEQSTRIIGCS*LPLFWR
Trigger: CCTCCAAAAGAGTGGAAGCCACGAGCATCCTATGAT...CCTGGTACTCTGTTCCACCTGAGCATGGAAAGCGGTTGGAACGCCTCGCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485249.1
3UTR-3UTR GCA 90 bp AGGTGGCATCAGCTCCTTAGCATCTCAATACTGCAGCTTTGCCAGCACTGTCTTTGGGAGATCAGCGACTaGTGCCACGTGCCCAGAAAT +
Preference number: 2 (lower is better)
Translates to: RWHQLLSISILQLCQHCLWEISD*CHVPRN
Trigger: ATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA...AAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR TCA 90 bp ACTTATCGCTATTGGCTATCTTGCGGAACTCTCGAACAGTCATGGCTTTCTTCTCCCGTCACCAGCTGTTaGATGGGGGCAGGAATGACC +
Preference number: 2 (lower is better)
Translates to: TYRYWLSCGTLEQSWLSSPVTSC*MGAGMT
Trigger: GGTCATTCCTGCCCCCATTCAACAGCTGGTGACGGG...AGAAGAAAGCCATGACTGTTCGAGAGTTCCGCAAGATAGCCAATAGCGATAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485249.1
3UTR-3UTR GCA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCATCAGCGTTCCATGTCTaGTGTGCTGTGGAACCCAGA +
Preference number: 2 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVASAFHV*CAVEPR
Trigger: TCTGGGTTCCACAGCACAGCAGACATGGAACGCTGA...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR GCA 90 bp CTTTGGCGAGGCGTTCCAACCGCTTTCCATGCTCAGGTGGAACAGAGTACCAGGGGTACCATTCACATCTaGACCATAGATTGGAGGATT +
Preference number: 2 (lower is better)
Translates to: LWRGVPTAFHAQVEQSTRGTIHI*TIDWRI
Trigger: AATCCTCCAATCTATGGTGCAGATGTGAATGGTACC...CCTGGTACTCTGTTCCACCTGAGCATGGAAAGCGGTTGGAACGCCTCGCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485249.1
3UTR-3UTR CCA 90 bp AGGTGGCATCAGCTCCTTAGCATCTCAATACTGCAGCTTTGCCAGCACTGTCTTCAGAGTGCTCTTGCCTaGATGGCTGAGAATCCCTTG +
Preference number: 2 (lower is better)
Translates to: RWHQLLSISILQLCQHCLQSALA*MAENPL
Trigger: CAAGGGATTCTCAGCCATCCAGGCAAGAGCACTCTG...AAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR CCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCTACAAAAGTAGGGGTTaGGGCAAGTACCAGCACCTC +
Preference number: 2 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGYKSRG*GKYQHL
Trigger: GAGGTGCTGGTACTTGCCCCAACCCCTACTTTTGTA...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR GCA 90 bp CCCCTGCATGATTGCAATTTTCTGTTGACAGAATCACCCACCAGGCTCTGCCTGTCAATACTGCAGCTTTaGCAGCACTGTCTTGAGACG +
Preference number: 2 (lower is better)
Translates to: PLHDCNFLLTESPTRLCLSILQL*QHCLET
Trigger: CGTCTCAAGACAGTGCTGGCAAAGCTGCAGTATTGA...CAGGCAGAGCCTGGTGGGTGATTCTGTCAACAGAAAATTGCAATCATGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR GCA 90 bp CCCCTGCATGATTGCAATTTTCTGTTGACAGAATCACCCACCAGGCTCTGCCTGTTAGCATCTCAATACTaGAGCTTTGCCAGCACTGTC +
Preference number: 2 (lower is better)
Translates to: PLHDCNFLLTESPTRLCLLASQY*SFASTV
Trigger: GACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAA...CAGGCAGAGCCTGGTGGGTGATTCTGTCAACAGAAAATTGCAATCATGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR TCA 90 bp GCTCTTCAAACTCACTATAGCGTGGGGTACAGTACTTATCGCTATTGGCTATCTTGCATTCTCTCCCCTTaGAGAAAGTCCACATGGGAA +
Preference number: 2 (lower is better)
Translates to: ALQTHYSVGYSTYRYWLSCILSP*RKSTWE
Trigger: TTCCCATGTGGACTTTCTTCAAGGGGAGAGAATGCA...AGATAGCCAATAGCGATAAGTACTGTACCCCACGCTATAGTGAGTTTGAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485249.1
3UTR-3UTR CCA 90 bp TCTCAGCCGGCCAATATTCCACTCATCAACATGCTTTTCATAGAGGGTACCATTTGGCTTCCACTCTTTTaGAGGAACAACAGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: SQPANIPLINMLFIEGTIWLPLF*RNNRRK
Trigger: CTTTCTCCTGTTGTTCCTCCAAAAGAGTGGAAGCCA...AATGGTACCCTCTATGAAAAGCATGTTGATGAGTGGAATATTGGCCGGCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485249.1
3UTR-3UTR GCA 90 bp GAATGTAAGATTTTTCCAGTATTTCCGCTCGAGCTCTTCAAACTCACTATAGCGCGCTATTGGCTATCTTaGGGAACTCTCGAACAGTCA +
Preference number: 2 (lower is better)
Translates to: ECKIFPVFPLELFKLTIARYWLS*GTLEQS
Trigger: TGACTGTTCGAGAGTTCCGCAAGATAGCCAATAGCG...CGCTATAGTGAGTTTGAAGAGCTCGAGCGGAAATACTGGAAAAATCTTACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485249.1
3UTR-3UTR CCA 90 bp TCAGCCGGCCAATATTCCACTCATCAACATGCTTTTCATAGAGGGTACCATTCAACTCTCGAACAGTCATaGCTTTCTTCTGTATGTTGT +
Preference number: 2 (lower is better)
Translates to: SAGQYSTHQHAFHRGYHSTLEQS*LSSVCC
Trigger: ACAACATACAGAAGAAAGCCATGACTGTTCGAGAGT...TGAATGGTACCCTCTATGAAAAGCATGTTGATGAGTGGAATATTGGCCGGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485249.1
3UTR TCA 72 bp GGCCAGGAACAAGGCAGCCAGTCCAGCCAGCATAGTTaGCCCCTCTATGGACTGGGGCCAGTGCAGCCACAG +
Preference number: 3 (lower is better)
Translates to: GQEQGSQSSQHS*PLYGLGPVQPQ
Trigger: CTGTGGCTGCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTTGTTCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR GCA 72 bp TCCAGTGCTCAGCCCCTCAGCTGGGAGATCAGCGACTaGTGCCACGTGCCCAGAAATGGCTCGTCCTTTCAC +
Preference number: 3 (lower is better)
Translates to: SSAQPLSWEISD*CHVPRNGSSFH
Trigger: GTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCAGCTGAGGGGCTGAGCACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR CCA 72 bp GCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTaGGGCCAGTGCAGCCACAGCATTCCAGTGCTCAGC +
Preference number: 3 (lower is better)
Translates to: ASPASIVDPSMD*GQCSHSIPVLS
Trigger: GCTGAGCACTGGAATGCTGTGGCTGCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR GCA 72 bp AGCCCCTCAGCTGGGAGATCAGCGACTGCTGCCACGTaGCCAGAAATGGCTCGTCCTTTCACTACAGCGGAA +
Preference number: 3 (lower is better)
Translates to: SPSAGRSATAAT*PEMARPFTTAE
Trigger: TTCCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCAGCTGAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR GCA 72 bp AGTGCTCAGCCCCTCAGCTGGGAGATCAGCGACTGCTaGCACGTGCCCAGAAATGGCTCGTCCTTTCACTAC +
Preference number: 3 (lower is better)
Translates to: SAQPLSWEISDC*HVPRNGSSFHY
Trigger: GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCAGCTGAGGGGCTGAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR CAA 90 bp AAGGCAGCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTGGGGCCAGTGCGAACCCAGAGTGCTCTaGCCTGGATGGCTGAGAATC +
Preference number: 3 (lower is better)
Translates to: KAASPASIVDPSMDWGQCEPRVL*PGWLRI
Trigger: GATTCTCAGCCATCCAGGCAAGAGCACTCTGGGTTC...GCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR CCA 72 bp CTGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATaGCTCGTCCTTTCACTACAGCGGAATGCAATGAGG +
Preference number: 3 (lower is better)
Translates to: LGDQRLLPRAQK*LVLSLQRNAMR
Trigger: CCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR GCA 72 bp TGGCATCAGCTCCTTAGCATCTCAATACTGCAGCTTTaGCAGCACTGTCTTGAGACGGTTCCAGGCCTGGAC +
Preference number: 3 (lower is better)
Translates to: WHQLLSISILQL*QHCLETVPGLD
Trigger: GTCCAGGCCTGGAACCGTCTCAAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR-3UTR CAA 90 bp TTATCGCTATTGGCTATCTTGCGGAACTCTCGAACAGTCATGGCTTTCTTCTGTCCCCGTCACCAGCTGTaGAATGGGGGCAGGAATGAC +
Preference number: 3 (lower is better)
Translates to: LSLLAILRNSRTVMAFFCPRHQL*NGGRND
Trigger: GTCATTCCTGCCCCCATTCAACAGCTGGTGACGGGG...ACAGAAGAAAGCCATGACTGTTCGAGAGTTCCGCAAGATAGCCAATAGCGATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485249.1
3UTR GCA 72 bp CAAAGAGGTGGCATCAGCTCCTTAGCATCTCAATACTaGAGCTTTGCCAGCACTGTCTTGAGACGGTTCCAG +
Preference number: 3 (lower is better)
Translates to: QRGGISSLASQY*SFASTVLRRFQ
Trigger: CTGGAACCGTCTCAAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCACCTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR GCA 72 bp AAAAAGCCTTTGGCGAGGCGTTCCAACCGCTTTCCATaGTCAGGTGGAACAGAGTACCAGGACTTTGGTTCT +
Preference number: 3 (lower is better)
Translates to: KKPLARRSNRFP*SGGTEYQDFGS
Trigger: AGAACCAAAGTCCTGGTACTCTGTTCCACCTGAGCATGGAAAGCGGTTGGAACGCCTCGCCAAAGGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485249.1
3UTR TCA 72 bp TCTCGAACAGTCATGGCTTTCTTCTGTATGTTGTACTaGGTAAAGAGGCCAGACTGCCCCGTCACCAGCTGT +
Preference number: 3 (lower is better)
Translates to: SRTVMAFFCMLY*VKRPDCPVTSC
Trigger: ACAGCTGGTGACGGGGCAGTCTGGCCTCTTTACTCAGTACAACATACAGAAGAAAGCCATGACTGTTCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485249.1
3UTR-3UTR CAA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCGCAGAATTTCACATTTaGTTTGCCCTGCATAGGCAA +
Preference number: 3 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGAEFHI*FALHRQ
Trigger: TTGCCTATGCAGGGCAAACAAAATGTGAAATTCTGC...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR GCA 72 bp AGCGTGGGGTACAGTACTTATCGCTATTGGCTATCTTaGGGAACTCTCGAACAGTCATGGCTTTCTTCTGTA +
Preference number: 3 (lower is better)
Translates to: SVGYSTYRYWLS*GTLEQSWLSSV
Trigger: TACAGAAGAAAGCCATGACTGTTCGAGAGTTCCGCAAGATAGCCAATAGCGATAAGTACTGTACCCCACGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485249.1
3UTR-3UTR CAA 90 bp GAATGTAAGATTTTTCCAGTATTTCCGCTCGAGCTCTTCAAACTCACTATAGCGTCGCTATTGGCTATCTaGCGGAACTCTCGAACAGTC +
Preference number: 3 (lower is better)
Translates to: ECKIFPVFPLELFKLTIASLLAI*RNSRTV
Trigger: GACTGTTCGAGAGTTCCGCAAGATAGCCAATAGCGA...CGCTATAGTGAGTTTGAAGAGCTCGAGCGGAAATACTGGAAAAATCTTACATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485249.1
3UTR CCA 72 bp TTCATAGAGGGTACCATTCACATCTGCACCATAGATTaGAGGATTGAATGTAAGATTTTTCCAGTATTTCCG +
Preference number: 3 (lower is better)
Translates to: FIEGTIHICTID*RIECKIFPVFP
Trigger: CGGAAATACTGGAAAAATCTTACATTCAATCCTCCAATCTATGGTGCAGATGTGAATGGTACCCTCTATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR GCA 90 bp GCCAGGGGCTGGCAGAAGCTGGTCCAGACCAAACATACACGCACGCACGCACGCGATGGCGGGGGAGCTTaGTTAAAGGCTGACGGCGTC +
Preference number: 4 (lower is better)
Translates to: ARGWQKLVQTKHTRTHARDGGGA*LKADGV
Trigger: GACGCCGTCAGCCTTTAAGCAAGCTCCCCCGCCATC...GCGTGCGTGCGTGCGTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp GCCAGGGGCTGGCAGAAGCTGGTCCAGACCAAACATACACGCACGCACGCACGCCCTGCAGTGATGCTTTaGAAGGCCCCCTTGGCACGC +
Preference number: 4 (lower is better)
Translates to: ARGWQKLVQTKHTRTHARPAVML*KAPLAR
Trigger: GCGTGCCAAGGGGGCCTTGCAAAGCATCACTGCAGG...GCGTGCGTGCGTGCGTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp GCCAGGGGCTGGCAGAAGCTGGTCCAGACCAAACATACACGCACGCACGCACGCGCGACTGCTGCCACGTaGCCAGAAATGGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: ARGWQKLVQTKHTRTHARATAAT*PEMARP
Trigger: AGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGC...GCGTGCGTGCGTGCGTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp AAGGCAGCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTGGGGCCAGTGCCCCGTCACCAGCTGTTaGATGGGGGCAGGAATGACC +
Preference number: 4 (lower is better)
Translates to: KAASPASIVDPSMDWGQCPVTSC*MGAGMT
Trigger: GGTCATTCCTGCCCCCATTCAACAGCTGGTGACGGG...GCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp GCCAGGGGCTGGCAGAAGCTGGTCCAGACCAAACATACACGCACGCACGCACGCAGCTTGCTTAAAGGCTaGCGGCGTCCCTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: ARGWQKLVQTKHTRTHARSLLKG*RRPLDF
Trigger: GAAGTCCAAGGGACGCCGTCAGCCTTTAAGCAAGCT...GCGTGCGTGCGTGCGTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp AAGGCAGCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTGGGGCCAGTGCTGCAGCACAAGTGGGTaGTGGCGGGGGAGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: KAASPASIVDPSMDWGQCCSTSG*WRGSLL
Trigger: AAGCAAGCTCCCCCGCCATCACCCACTTGTGCTGCA...GCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACGCACAGAGCTATGGGTaGGCCTCACAGGGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYAQSYG*ASQGRG
Trigger: CCCTCGCCCCTGTGAGGCCCACCCATAGCTCTGTGC...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GCCAGGGGCTGGCAGAAGCTGGTCCAGACCAAACATACACGCACGCACGCACGCGTGCTCTTGCCTGGATaGCTGAGAATCCCTTGGACC +
Preference number: 4 (lower is better)
Translates to: ARGWQKLVQTKHTRTHARVLLPG*LRIPWT
Trigger: GGTCCAAGGGATTCTCAGCCATCCAGGCAAGAGCAC...GCGTGCGTGCGTGCGTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGGCTCAGCCCCTCAGCTaGGAGATCAGCGACTGCTGC +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRAQPLS*EISDCC
Trigger: GCAGCAGTCGCTGATCTCCCAGCTGAGGGGCTGAGC...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGATACAGACAGCGCAGTaGGGGGCCTGTTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRIQTAQ*GACWAM
Trigger: CATGGCCCAACAGGCCCCTCACTGCGCTGTCTGTAT...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACGTTGGGCAGCGGCCGTaGGAACACTGCACACAGCAG +
Preference number: 4 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYVGQRP*EHCTQQ
Trigger: CTGCTGTGTGCAGTGTTCTCACGGCCGCTGCCCAAC...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp AAGGCAGCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTGGGGCCAGTGCAGAGATAGAATCCCGTaGAGAGCCAGAGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: KAASPASIVDPSMDWGQCRDRIP*RARAQA
Trigger: AGCCTGGGCTCTGGCTCTTCACGGGATTCTATCTCT...GCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACATGGCTCTCCCACAGTaGCCCTGCCATCCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYMALPQ*PCHPLW
Trigger: CCAAAGGGGATGGCAGGGTCACTGTGGGAGAGCCAT...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGTCTTGCCTGGATGGCTaGGAATCCCTTGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRSCLDG*ESLGPW
Trigger: CCAGGGTCCAAGGGATTCTCAGCCATCCAGGCAAGA...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGGAGATCAGCGACTGCTaGCACGTGCCCAGAAATGGC +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQREISDC*HVPRNG
Trigger: GCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTC...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTGGACCCCATAGCAACTaGCATGGACCCGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSGPHSN*HGPGRC
Trigger: GCAGCGTCCGGGTCCATGCCAGTTGCTATGGGGTCC...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GCCAGGGGCTGGCAGAAGCTGGTCCAGACCAAACATACACGCACGCACGCACGCGGGAAGACAAAGAGGTaGCATCAGCTCCTTAGCATC +
Preference number: 4 (lower is better)
Translates to: ARGWQKLVQTKHTRTHARGKTKR*HQLLSI
Trigger: GATGCTAAGGAGCTGATGCCACCTCTTTGTCTTCCC...GCGTGCGTGCGTGCGTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGTTTGGAGGTCGGTTCTaGCACAGTTGGCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRFGGRF*HSWLRG
Trigger: GCCTCTGAGCCAACTGTGGCAGAACCGACCTCCAAA...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTGCCACAGCATTCCAGTaGTCAGCCCCTCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSATAFQ*SAPQLG
Trigger: TCCCAGCTGAGGGGCTGAGCACTGGAATGCTGTGGC...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCTGCCGCACAGAGCTATaGGTGGGCCTCACAGGGGCG +
Preference number: 4 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGCRTEL*VGLTGA
Trigger: CGCCCCTGTGAGGCCCACCCATAGCTCTGTGCGGCA...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GCCAGGGGCTGGCAGAAGCTGGTCCAGACCAAACATACACGCACGCACGCACGCGTATACACAGGGTATTaGTGTGAAGCCCTCCAATCC +
Preference number: 4 (lower is better)
Translates to: ARGWQKLVQTKHTRTHARVYTGY*CEALQS
Trigger: GGATTGGAGGGCTTCACACCAATACCCTGTGTATAC...GCGTGCGTGCGTGCGTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp AAGGCAGCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTGGGGCCAGTGCGGGCCATGGTCTCATTaGATTCCTTCTCAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: KAASPASIVDPSMDWGQCGPWSH*IPSQPQ
Trigger: TTGAGGCTGAGAAGGAATTCAATGAGACCATGGCCC...GCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACGAAGCACCTACTCCATaGTGGCCCGGTATAGTGCAG +
Preference number: 4 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYEAPTP*WPGIVQ
Trigger: CTGCACTATACCGGGCCATCATGGAGTAGGTGCTTC...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp AAGGCAGCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTGGGGCCAGTGCCTTGTGGCGGAGAAATaGCTCACAGCTTTGAGCACT +
Preference number: 4 (lower is better)
Translates to: KAASPASIVDPSMDWGQCLVAEK*LTALST
Trigger: AGTGCTCAAAGCTGTGAGGCATTTCTCCGCCACAAG...GCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGGAGCACAGCACAGCTTaGTTGCCGTACTCAATCCAC +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQREHSTA*LPYSIH
Trigger: GTGGATTGAGTACGGCAAGCAAGCTGTGCTGTGCTC...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp AAGGCAGCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTGGGGCCAGTGCCTTAAGAAACTCAGCTaGTTCTGGCGTGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: KAASPASIVDPSMDWGQCLKKLS*FWRGQS
Trigger: ACTCTGCCCACGCCAGAAGCAGCTGAGTTTCTTAAG...GCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTGGCACTCCTCCTCGTTaGCAGCTCTTGGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSGTPPR*QLLEAV
Trigger: AACTGCCTCCAAGAGCTGGCAACGAGGAGGAGTGCC...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGATGTCTGCTGTGCTGTaGAACCCAGAGTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRMSAVL*NPECSC
Trigger: GCAAGAGCACTCTGGGTTCCACAGCACAGCAGACAT...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACGGGGCTGGCAGAAGCTaGTCCAGACCAAACATACAC +
Preference number: 4 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYGAGRS*SRPNIH
Trigger: GTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCC...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCCCCTCCCACCTACAGTaGGCCTCCAATGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGPSHLQ*ASNGPS
Trigger: ACTGGGGCCATTGGAGGCCCACTGTAGGTGGGAGGG...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGCATAACTGTGCACAGTaGGAACTCCCGTTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRHNCAQ*ELPFAL
Trigger: AAGGGCAAACGGGAGTTCTCACTGTGCACAGTTATG...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACTGCAATGAGGGTGGGTaGGAAGATGATGGGTCGGTT +
Preference number: 4 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYCNEGG*EDDGSV
Trigger: AACCGACCCATCATCTTCTCACCCACCCTCATTGCA...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGTCCAACCGCTTTCCATaGTCAGGTGGAACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRSNRFP*SGGTEY
Trigger: GTACTCTGTTCCACCTGAGCATGGAAAGCGGTTGGA...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp GCCAGGGGCTGGCAGAAGCTGGTCCAGACCAAACATACACGCACGCACGCACGCAATGTTGACAAACCTTaGTTCCAGAATTGCCACAGC +
Preference number: 4 (lower is better)
Translates to: ARGWQKLVQTKHTRTHARNVDKP*FQNCHS
Trigger: GCTGTGGCAATTCTGGAAGCAAGGTTTGTCAACATT...GCGTGCGTGCGTGCGTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAGGCCAGTCGTCAGGCTaGATCATCACACCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVAGQSSG*IITPAA
Trigger: GGCTGCCGGTGTGATGATGCAGCCTGACGACTGGCC...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACCACCCTGTAATACTTTaGCACAGGGGCTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYHPVIL*HRGSAP
Trigger: AGGTGCAGAGCCCCTGTGGCAAAGTATTACAGGGTG...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp AAGGCAGCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTGGGGCCAGTGCATCATAGGATGCTCGTaGCTTCCACTCTTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: KAASPASIVDPSMDWGQCIIGCS*LPLFWR
Trigger: CCTCCAAAAGAGTGGAAGCCACGAGCATCCTATGAT...GCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GCCAGGGGCTGGCAGAAGCTGGTCCAGACCAAACATACACGCACGCACGCACGCAAACTCACTATAGCGTaGGGTACAGTACTTATCGCT +
Preference number: 4 (lower is better)
Translates to: ARGWQKLVQTKHTRTHARKLTIA*GTVLIA
Trigger: AGCGATAAGTACTGTACCCCACGCTATAGTGAGTTT...GCGTGCGTGCGTGCGTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGGGCGTGGGCAGAGTATaGTCAATAACTGTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRGVGRV*SITVLS
Trigger: GGACAACACAGTTATTGACCATACTCTGCCCACGCC...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAACTCCCGTTTGCCCTTaGGCTCGGCAGGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVATPVCP*ARQERG
Trigger: GCCTCTCTCCTGCCGAGCCCAAGGGCAAACGGGAGT...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGTCTGTCCATCTCACTTaGACCACTTCCCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRSVHLT*TTSPSA
Trigger: TGCTGAAGGGGAAGTGGTCCAAGTGAGATGGACAGA...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACTCCACCTGGTACATTTaGATAGGGTGGGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYSTWYI*IGWEAT
Trigger: TGTGGCCTCCCACCCTATCCAAATGTACCAGGTGGA...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp AAGGCAGCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTGGGGCCAGTGCTCCTCAAACTCCACCTaGTACATTTGGATAGGGTGG +
Preference number: 4 (lower is better)
Translates to: KAASPASIVDPSMDWGQCSSNST*YIWIGW
Trigger: CCACCCTATCCAAATGTACCAGGTGGAGTTTGAGGA...GCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACCCACGTGCCCAGAAATaGCTCGTCCTTTCACTACAG +
Preference number: 4 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYPRAQK*LVLSLQ
Trigger: CTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGG...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGTACAAAAGTAGGGGTTaGGGCAAGTACCAGCACCTC +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRYKSRG*GKYQHL
Trigger: GAGGTGCTGGTACTTGCCCCAACCCCTACTTTTGTA...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCGCTAGCCCTGCCCGATaGGCTCCTTGGGATTCAATG +
Preference number: 4 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGASPAR*APWDSM
Trigger: CATTGAATCCCAAGGAGCTCATCGGGCAGGGCTAGC...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCTTGCCAGCACTGTCTTaGGACGGTTCCAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGLPALS*DGSRPG
Trigger: TCCAGGCCTGGAACCGTCTCAAGACAGTGCTGGCAA...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp AAGGCAGCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTGGGGCCAGTGCATTGCAATTTTCTGTTaGCAGAATCACCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: KAASPASIVDPSMDWGQCIAIFC*QNHPPG
Trigger: GCCTGGTGGGTGATTCTGTCAACAGAAAATTGCAAT...GCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCCACAGGGTATTGGTGTaGAGCCCTCCAATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGHRVLV*SPPILG
Trigger: GCCCAGGATTGGAGGGCTTCACACCAATACCCTGTG...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGGTGAGAACTCCCGTTTaGCCTTGGGCTCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMVRTPV*PWARQE
Trigger: CTCCTGCCGAGCCCAAGGGCAAACGGGAGTTCTCAC...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp AAGGCAGCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTGGGGCCAGTGCAAACGAGTATGCTGGTaGCATCCTCCTCAAGATAAG +
Preference number: 4 (lower is better)
Translates to: KAASPASIVDPSMDWGQCKRVCW*HPPQDK
Trigger: CTTATCTTGAGGAGGATGGCACCAGCATACTCGTTT...GCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGAACCCTCCCAGCCCCTaGATGATTGCAATTTTCTGT +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRNPPSP*MIAIFC
Trigger: ACAGAAAATTGCAATCATGCAGGGGCTGGGAGGGTT...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTTCCCTATTCGGTGCTTaGCCAGGCTTGTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSSLFGA*PGLSSG
Trigger: ACCTGAAGACAAGCCTGGCCAAGCACCGAATAGGGA...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGCTCCTGCAGCACAAGTaGGTGATGGCGGGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMLLQHK*VMAGEL
Trigger: AAGCTCCCCCGCCATCACCCACTTGTGCTGCAGGAG...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAGTTGGCTCAGAGGCTTaGCCCAGGCCTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVAVGSEA*PRPLSP
Trigger: AGGAGACAGAGGCCTGGGCCAAGCCTCTGAGCCAAC...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTCCTCCTCTAGGGCATTaGCTGAACACCGAGAACACA +
Preference number: 4 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSPPLGH*LNTENT
Trigger: TGTGTTCTCGGTGTTCAGCCAATGCCCTAGAGGAGG...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp CCCCTGCATGATTGCAATTTTCTGTTGACAGAATCACCCACCAGGCTCTGCCTGCACATGGAAGGCAGTTaGGCAGCGGCCGTGAGAACA +
Preference number: 4 (lower is better)
Translates to: PLHDCNFLLTESPTRLCLHMEGS*AAAVRT
Trigger: TGTTCTCACGGCCGCTGCCCAACTGCCTTCCATGTG...CAGGCAGAGCCTGGTGGGTGATTCTGTCAACAGAAAATTGCAATCATGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp AGGTGGCATCAGCTCCTTAGCATCTCAATACTGCAGCTTTGCCAGCACTGTCTTATCACACCGGCAGCCTaGGCGCAGCTCACATGGAAG +
Preference number: 4 (lower is better)
Translates to: RWHQLLSISILQLCQHCLITPAA*AQLTWK
Trigger: CTTCCATGTGAGCTGCGCCCAGGCTGCCGGTGTGAT...AAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACATGTCTCATCATCACTaGCACACTCCTGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYMSHHH*HTPAAQ
Trigger: TTGTGCTGCAGGAGTGTGTCAGTGATGATGAGACAT...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACCTTAACCACAAGTTGTaGGCCATCCTCAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYLNHKL*AILKLH
Trigger: GTGGAGTTTGAGGATGGCTCACAACTTGTGGTTAAG...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGTCCAGCCAGCATAGTTaGCCCCTCTATGGACTGGGG +
Preference number: 4 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMSSQHS*PLYGLG
Trigger: CCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGA...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTTCATCATTTGCTCTCTaGAGGGCCCCTCCTCGTAAT +
Preference number: 4 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSSSFAL*RAPPRN
Trigger: ATTACGAGGAGGGGCCCTGCAGAGAGCAAATGATGA...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp AGGTGGCATCAGCTCCTTAGCATCTCAATACTGCAGCTTTGCCAGCACTGTCTTCCACCTGTCATCATTTaGTCTCTGCAGGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RWHQLLSISILQLCQHCLPPVII*SLQGPS
Trigger: GGAGGGGCCCTGCAGAGAGCAAATGATGACAGGTGG...AAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGATGGACTGGGGCCAGTaGAGCCACAGCATTCCAGTG +
Preference number: 4 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMMDWGQ*SHSIPV
Trigger: CACTGGAATGCTGTGGCTGCACTGGCCCCAGTCCAT...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACTCAATACTGCAGCTTTaGCAGCACTGTCTTGAGACG +
Preference number: 4 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYSILQL*QHCLET
Trigger: CGTCTCAAGACAGTGCTGGCAAAGCTGCAGTATTGA...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGTTAGCATCTCAATACTaGAGCTTTGCCAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRLASQY*SFASTV
Trigger: GACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAA...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp CCCCTGCATGATTGCAATTTTCTGTTGACAGAATCACCCACCAGGCTCTGCCTGTTGGAGGAACAACCTTaGCTAGCCCTGCCCGATGAG +
Preference number: 4 (lower is better)
Translates to: PLHDCNFLLTESPTRLCLLEEQP*LALPDE
Trigger: CTCATCGGGCAGGGCTAGCCAAGGTTGTTCCTCCAA...CAGGCAGAGCCTGGTGGGTGATTCTGTCAACAGAAAATTGCAATCATGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp AAGGCAGCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTGGGGCCAGTGCAGTACTTATCGCTATTaGCTATCTTGCGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: KAASPASIVDPSMDWGQCSTYRY*LSCGTL
Trigger: GAGAGTTCCGCAAGATAGCCAATAGCGATAAGTACT...GCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GTGATCCCACTCTCCTTTTCCACCAAGTCCAGGATTGTTCTCAGCCGGCCAATACTGGGAAAAAGCCTTTaGCGAGGCGTTCCAACCGCT +
Preference number: 4 (lower is better)
Translates to: VIPLSFSTKSRIVLSRPILGKSL*RGVPTA
Trigger: AGCGGTTGGAACGCCTCGCCAAAGGCTTTTTCCCAG...TATTGGCCGGCTGAGAACAATCCTGGACTTGGTGGAAAAGGAGAGTGGGATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR CCA 90 bp AACATACACGCACGCACGCACGCACGCACACACACACACACATATAAATACAAATGGGCGCAGCTCACATaGAAGGCAGTTGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: NIHARTHARTHTHTYKYKWAQLT*KAVGQR
Trigger: CCGCTGCCCAACTGCCTTCCATGTGAGCTGCGCCCA...TTTGTATTTATATGTGTGTGTGTGTGTGCGTGCGTGCGTGCGTGCGTGTATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp AGGTGGCATCAGCTCCTTAGCATCTCAATACTGCAGCTTTGCCAGCACTGTCTTAGACGGTTCCAGGCCTaGACAGATGCCACACCCATC +
Preference number: 4 (lower is better)
Translates to: RWHQLLSISILQLCQHCLRRFQA*TDATPI
Trigger: GATGGGTGTGGCATCTGTCCAGGCCTGGAACCGTCT...AAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
3UTR CAA 72 bp GTAATACTTTGCCACAGGGGCTCTGCACCTAGAGTGTaGTGGGCACACACCCATGTTATCCCCATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: VILCHRGSAPRV*WAHTHVIPMFS
Trigger: GGAGAACATGGGGATAACATGGGTGTGTGCCCACAACACTCTAGGTGCAGAGCCCCTGTGGCAAAGTATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGAGGCAATGTATCTACTaGAGTTTCGGAACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRRQCIY*SFGTLP
Trigger: TGGAAGAGTTCCGAAACTTCAGTAGATACATTGCCT...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCGGGAAGAGCTCACTCTaGCTCACCTCCTGTGGTATT +
Preference number: 4 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGGKSSL*LTSCGI
Trigger: AATACCACAGGAGGTGAGTCAGAGTGAGCTCTTCCC...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAATTGCCACAGCACATaGAACGTGGACCCACCTGTC +
Preference number: 4 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGNCHST*NVDPPV
Trigger: GACAGGTGGGTCCACGTTTCATGTGCTGTGGCAATT...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAACTGGCCGATCCTACTaGTTTTCCAGCAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVATGRSY*FSSRRR
Trigger: CCTTCGCCTGCTGGAAAAGCAGTAGGATCGGCCAGT...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp AACATACACGCACGCACGCACGCACGCACACACACACACACATATAAATACAAACTTAGGCTCAGCTCCTaGTGTCGCCACTGGCCGATC +
Preference number: 4 (lower is better)
Translates to: NIHARTHARTHTHTYKYKLRLSS*CRHWPI
Trigger: GATCGGCCAGTGGCGACAGCAGGAGCTGAGCCTAAG...TTTGTATTTATATGTGTGTGTGTGTGTGCGTGCGTGCGTGCGTGCGTGTATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGGGTACCATTCACATCTaGACCATAGATTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRGTIHI*TIDWRI
Trigger: AATCCTCCAATCTATGGTGCAGATGTGAATGGTACC...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAAGCGCCCGTTCTTATaGTTGCTAATGACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYKRPFL*LLMTFW
Trigger: CCAGAAAGTCATTAGCAAGCATAAGAACGGGCGCTT...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGTGGGAGATCAGCGACTaGTGCCACGTGCCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMWEISD*CHVPRN
Trigger: ATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGTCCTGCTGTCGCCACTaGCCGATCCTACTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMSCCRH*PILLLF
Trigger: GAAAAGCAGTAGGATCGGCCAGTGGCGACAGCAGGA...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp AGGTGGCATCAGCTCCTTAGCATCTCAATACTGCAGCTTTGCCAGCACTGTCTTCTGGGAAAAAGCCTTTaGCGAGGCGTTCCAACCGCT +
Preference number: 4 (lower is better)
Translates to: RWHQLLSISILQLCQHCLLGKSL*RGVPTA
Trigger: AGCGGTTGGAACGCCTCGCCAAAGGCTTTTTCCCAG...AAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp CCCCTGCATGATTGCAATTTTCTGTTGACAGAATCACCCACCAGGCTCTGCCTGAAACTCAGCTGCTTCTaGCGTGGGCAGAGTATGGTC +
Preference number: 4 (lower is better)
Translates to: PLHDCNFLLTESPTRLCLKLSCF*RGQSMV
Trigger: GACCATACTCTGCCCACGCCAGAAGCAGCTGAGTTT...CAGGCAGAGCCTGGTGGGTGATTCTGTCAACAGAAAATTGCAATCATGCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp CCCCTGCATGATTGCAATTTTCTGTTGACAGAATCACCCACCAGGCTCTGCCTGTTTCTTCCTCGTGCATaGCTCTCCCACAGTGACCCT +
Preference number: 4 (lower is better)
Translates to: PLHDCNFLLTESPTRLCLFLPRA*LSHSDP
Trigger: AGGGTCACTGTGGGAGAGCCATGCACGAGGAAGAAA...CAGGCAGAGCCTGGTGGGTGATTCTGTCAACAGAAAATTGCAATCATGCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCCTCAGCCTCAAAGTTTaGAGGTCGGTTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGLSLKV*RSVLPQ
Trigger: CTGTGGCAGAACCGACCTCCAAACTTTGAGGCTGAG...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACCATTTCTGGAATCAATaGCTTGGTCCTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYHFWNQ*LGPLLL
Trigger: CAGAAGCAGAGGACCAAGCCATTGATTCCAGAAATG...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAGCAGGAGGACCAAACTaGAGACAGTCCTGGCTCACT +
Preference number: 4 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVAAGGPN*RQSWLT
Trigger: AGTGAGCCAGGACTGTCTCCAGTTTGGTCCTCCTGC...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGGGGAGGCCACAAACTTaGCTCCATAGACTTGGCCGT +
Preference number: 4 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMGRPQT*LHRLGR
Trigger: ACGGCCAAGTCTATGGAGCCAAGTTTGTGGCCTCCC...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCTGGCTGAGAATCCCTTaGACCCTGGAAGCACCTACT +
Preference number: 4 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGWLRIP*TLEAPT
Trigger: AGTAGGTGCTTCCAGGGTCCAAGGGATTCTCAGCCA...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAACTCTCCAGCCTCTTaGGTCACCTTGTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGNSPAS*VTLSKG
Trigger: TCCCTTTGACAAGGTGACTCAAGAGGCTGGAGAGTT...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGTTTCTTTTTGGAGCCTaGGAAGACAAGGCGTCCCCC +
Preference number: 4 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMFLFGA*EDKASP
Trigger: GGGGGACGCCTTGTCTTCTCAGGCTCCAAAAAGAAA...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGTTCTTTCTGCAATGTTaGCAAACCTTGCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRFFLQC*QTLLPE
Trigger: TTCTGGAAGCAAGGTTTGTCAACATTGCAGAAAGAA...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp AACATACACGCACGCACGCACGCACGCACACACACACACACATATAAATACAAACTTTCTGGCCTGCAGTaGTGCTTTGCAAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: NIHARTHARTHTHTYKYKLSGLQ*CFARPP
Trigger: AGGGGGCCTTGCAAAGCATCACTGCAGGCCAGAAAG...TTTGTATTTATATGTGTGTGTGTGTGTGCGTGCGTGCGTGCGTGCGTGTATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp ACTCATGTTGGCTGGCCAGTGCATTCTCTCCCCTTGAAGAAAGTCCACATGGGACTTGTGGCGGAGAAATaGCTCACAGCTTTGAGCACT +
Preference number: 4 (lower is better)
Translates to: THVGWPVHSLPLKKVHMGLVAEK*LTALST
Trigger: AGTGCTCAAAGCTGTGAGGCATTTCTCCGCCACAAG...TCCCATGTGGACTTTCTTCAAGGGGAGAGAATGCACTGGCCAGCCAACATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR GCA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGACAGCACAGCTTGCTTaGCGTACTCAATCCACCGAC +
Preference number: 4 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMTAQLA*RTQSTD
Trigger: GTCGGTGGATTGAGTACGGCAAGCAAGCTGTGCTGT...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAAGACCATCCTCAACTTaGCGCACAGAGCTATGGGTG +
Preference number: 4 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVARPSST*RTELWV
Trigger: CACCCATAGCTCTGTGCGGCAAGTTGAGGATGGTCT...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp AGGTGGCATCAGCTCCTTAGCATCTCAATACTGCAGCTTTGCCAGCACTGTCTTTTCATCTGCAACCTCTaGCAGCTCCCGCTCACTGAA +
Preference number: 4 (lower is better)
Translates to: RWHQLLSISILQLCQHCLFICNL*QLPLTE
Trigger: TTCAGTGAGCGGGAGCTGGCAGAGGTTGCAGATGAA...AAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAGAAGCCCTCCAATCCTaGGCCCAGGCAAACAAATTC +
Preference number: 4 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVAEALQS*AQANKF
Trigger: GAATTTGTTTGCCTGGGCCCAGGATTGGAGGGCTTC...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp CCCCTGCATGATTGCAATTTTCTGTTGACAGAATCACCCACCAGGCTCTGCCTGTGCAGCCAGTCGAAGTaGAGCACATTTCTGGAATCA +
Preference number: 4 (lower is better)
Translates to: PLHDCNFLLTESPTRLCLCSQSK*STFLES
Trigger: TGATTCCAGAAATGTGCTTCACTTCGACTGGCTGCA...CAGGCAGAGCCTGGTGGGTGATTCTGTCAACAGAAAATTGCAATCATGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTGATAAAGATTGTCGCTaGAGGAGCCATCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSDKDCR*RSHHQS
Trigger: ACTTTGATGATGGCTCCTTCAGCGACAATCTTTATC...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCATCTTCCCGGTATCTTaGGTTGATAACTCGTTGCCG +
Preference number: 4 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGIFPVS*VDNSLP
Trigger: CGGCAACGAGTTATCAACTCAAGATACCGGGAAGAT...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp CCCCTGCATGATTGCAATTTTCTGTTGACAGAATCACCCACCAGGCTCTGCCTGTCAAGACAAACTCGGTaGCTCTTTGTCCCTATTCGG +
Preference number: 4 (lower is better)
Translates to: PLHDCNFLLTESPTRLCLSRQTR*LFVPIR
Trigger: CCGAATAGGGACAAAGAGGCACCGAGTTTGTCTTGA...CAGGCAGAGCCTGGTGGGTGATTCTGTCAACAGAAAATTGCAATCATGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCATGCAGGAAACGAGTATaGTGGTGCCATCCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVACRKRV*WCHPPQ
Trigger: TTGAGGAGGATGGCACCAGCATACTCGTTTCCTGCA...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp AACATACACGCACGCACGCACGCACGCACACACACACACACATATAAATACAAACATGGACCCGGACGCTaGACTTCTTGCAGGAAACGA +
Preference number: 4 (lower is better)
Translates to: NIHARTHARTHTHTYKYKHGPGR*TSCRKR
Trigger: TCGTTTCCTGCAAGAAGTGCAGCGTCCGGGTCCATG...TTTGTATTTATATGTGTGTGTGTGTGTGCGTGCGTGCGTGCGTGCGTGTATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp TCCTGGGAAAAAGCCTTTGGCGAGGCGTTCCAACCGCTTTCCATGCTCAGGTGGACTCTCGAACAGTCATaGCTTTCTTCTGTATGTTGT +
Preference number: 4 (lower is better)
Translates to: SWEKAFGEAFQPLSMLRWTLEQS*LSSVCC
Trigger: ACAACATACAGAAGAAAGCCATGACTGTTCGAGAGT...CCACCTGAGCATGGAAAGCGGTTGGAACGCCTCGCCAAAGGCTTTTTCCCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR CCA 90 bp CCCCTGCATGATTGCAATTTTCTGTTGACAGAATCACCCACCAGGCTCTGCCTGCTTTCCATGCTCAGGTaGAACAGAGTACCAGGACTT +
Preference number: 4 (lower is better)
Translates to: PLHDCNFLLTESPTRLCLLSMLR*NRVPGL
Trigger: AAGTCCTGGTACTCTGTTCCACCTGAGCATGGAAAG...CAGGCAGAGCCTGGTGGGTGATTCTGTCAACAGAAAATTGCAATCATGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGGCTTTGAGCACTTCCTaGGAAAAAGCCTTTGGCGAG +
Preference number: 4 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMALSTS*EKAFGE
Trigger: CTCGCCAAAGGCTTTTTCCCAGGAAGTGCTCAAAGC...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGATCAGGGTCATCTTGTaGCGGAGAAATGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMIRVIL*RRNASQ
Trigger: CTGTGAGGCATTTCTCCGCCACAAGATGACCCTGAT...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACTTGTACCTTTCTGGCTaGAACTTTCTCACAAACACA +
Preference number: 4 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYLYLSG*NFLTNT
Trigger: TGTGTTTGTGAGAAAGTTCCAGCCAGAAAGGTACAA...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAAACTCAGATCCTCCTTaGGGAAGAGCTCACTCTGAC +
Preference number: 4 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVANSDPP*GRAHSD
Trigger: GTCAGAGTGAGCTCTTCCCCAAGGAGGATCTGAGTT...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp AGGTGGCATCAGCTCCTTAGCATCTCAATACTGCAGCTTTGCCAGCACTGTCTTTTGGTCCTCTGCTTCTaGGGGGCTAAATCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: RWHQLLSISILQLCQHCLLVLCF*GAKSEA
Trigger: TGCTTCAGATTTAGCCCCCCAGAAGCAGAGGACCAA...AAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGGAATCCCTTGGACCCTaGAAGCACCTACTCCATGAT +
Preference number: 4 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMESLGP*KHLLHD
Trigger: ATCATGGAGTAGGTGCTTCCAGGGTCCAAGGGATTC...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCTTCTGTATGTTGTACTaGGTAAAGAGGCCAGACTGC +
Preference number: 4 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGFCMLY*VKRPDC
Trigger: GCAGTCTGGCCTCTTTACTCAGTACAACATACAGAA...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAAATGCCTCACAGCTTTaGGCACTTCCTGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVANASQL*ALPGKK
Trigger: CTTTTTCCCAGGAAGTGCTCAAAGCTGTGAGGCATT...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp AGGTGGCATCAGCTCCTTAGCATCTCAATACTGCAGCTTTGCCAGCACTGTCTTAGATACATTTCAGTTTaGAGCGGGGCAGGGGGATTT +
Preference number: 4 (lower is better)
Translates to: RWHQLLSISILQLCQHCLRYISV*SGAGGF
Trigger: AAATCCCCCTGCCCCGCTTCAAACTGAAATGTATCT...AAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCCTTACTCAGCTCAGCTaGGGGCAGAATTTCACATTT +
Preference number: 4 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGLTQLS*GQNFTF
Trigger: AAATGTGAAATTCTGCCCTCAGCTGAGCTGAGTAAG...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGAAACATGTATTCATCTaGAACCTCTGCCAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMKHVFI*NLCQLP
Trigger: CGGGAGCTGGCAGAGGTTGCAGATGAATACATGTTT...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp CCCCTGCATGATTGCAATTTTCTGTTGACAGAATCACCCACCAGGCTCTGCCTGCACCGGACTTCTTTCTaGAATGTTGACAAACCTTGC +
Preference number: 4 (lower is better)
Translates to: PLHDCNFLLTESPTRLCLHRTSF*NVDKPC
Trigger: GCAAGGTTTGTCAACATTGCAGAAAGAAGTCCGGTG...CAGGCAGAGCCTGGTGGGTGATTCTGTCAACAGAAAATTGCAATCATGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGTCACCCACCAGGCTCTaGCTGCTTCCATCATTAAAA +
Preference number: 4 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMSPTRL*LLPSLK
Trigger: TTTTAATGATGGAAGCAGGCAGAGCCTGGTGGGTGA...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTACTCTCGAACAGTCATaGCTTTCTTCTGTATGTTGT +
Preference number: 4 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSTLEQS*LSSVCC
Trigger: ACAACATACAGAAGAAAGCCATGACTGTTCGAGAGT...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp TCAAATTACAAGGACCAGAATACTCATGTTGGCTGGCCAGTGCATTCTCTCCCCGCTTTGAGCACTTCCTaGGAAAAAGCCTTTGGCGAG +
Preference number: 4 (lower is better)
Translates to: SNYKDQNTHVGWPVHSLPALSTS*EKAFGE
Trigger: CTCGCCAAAGGCTTTTTCCCAGGAAGTGCTCAAAGC...GGGGAGAGAATGCACTGGCCAGCCAACATGAGTATTCTGGTCCTTGTAATTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR CCA 90 bp AACATACACGCACGCACGCACGCACGCACACACACACACACATATAAATACAAACTCGTTGCCAGCTCTTaGAGGCAGTTCACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: NIHARTHARTHTHTYKYKLVASS*RQFTLL
Trigger: AAGGAGAGTGAACTGCCTCCAAGAGCTGGCAACGAG...TTTGTATTTATATGTGTGTGTGTGTGTGCGTGCGTGCGTGCGTGCGTGTATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGAGGAAACGAGTATGCTaGTGCCATCCTCCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMRKRVC*CHPPQD
Trigger: ATCTTGAGGAGGATGGCACCAGCATACTCGTTTCCT...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp CCCCTGCATGATTGCAATTTTCTGTTGACAGAATCACCCACCAGGCTCTGCCTGACAGCACATGAAACGTaGACCCACCTGTCATCATTT +
Preference number: 4 (lower is better)
Translates to: PLHDCNFLLTESPTRLCLTAHET*THLSSF
Trigger: AAATGATGACAGGTGGGTCCACGTTTCATGTGCTGT...CAGGCAGAGCCTGGTGGGTGATTCTGTCAACAGAAAATTGCAATCATGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp AGGTGGCATCAGCTCCTTAGCATCTCAATACTGCAGCTTTGCCAGCACTGTCTTTACATTTGGATAGGGTaGGAGGCCACAAACTTGGCT +
Preference number: 4 (lower is better)
Translates to: RWHQLLSISILQLCQHCLYIWIG*EATNLA
Trigger: AGCCAAGTTTGTGGCCTCCCACCCTATCCAAATGTA...AAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GTGATCCCACTCTCCTTTTCCACCAAGTCCAGGATTGTTCTCAGCCGGCCAATATGGCTTCCACTCTTTTaGAGGAACAACAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: VIPLSFSTKSRIVLSRPIWLPLF*RNNRRK
Trigger: CTTTCTCCTGTTGTTCCTCCAAAAGAGTGGAAGCCA...TATTGGCCGGCTGAGAACAATCCTGGACTTGGTGGAAAAGGAGAGTGGGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR TCA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAGAATGGGGGCAGGAATaGCCAAATCATCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVAEWGQE*PNHQCH
Trigger: ATGACATTGATGATTTGGTCATTCCTGCCCCCATTC...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp AACATACACGCACGCACGCACGCACGCACACACACACACACATATAAATACAAATTTGTCCCTATTCGGTaGTTGGCCAGGCTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: NIHARTHARTHTHTYKYKFVPIR*LARLVF
Trigger: GAAGACAAGCCTGGCCAAGCACCGAATAGGGACAAA...TTTGTATTTATATGTGTGTGTGTGTGTGCGTGCGTGCGTGCGTGCGTGTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAGGAGTCAGAATAATCTaGGAAGGTAAGACCATCCTC +
Preference number: 4 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVAGVRII*EGKTIL
Trigger: GAGGATGGTCTTACCTTCCCAGATTATTCTGACTCC...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp AGGTGGCATCAGCTCCTTAGCATCTCAATACTGCAGCTTTGCCAGCACTGTCTTTTGCTAATGACTTTCTaGCCTGCAGTGATGCTTTGC +
Preference number: 4 (lower is better)
Translates to: RWHQLLSISILQLCQHCLLLMTF*PAVMLC
Trigger: GCAAAGCATCACTGCAGGCCAGAAAGTCATTAGCAA...AAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp GGTACAGTACTTATCGCTATTGGCTATCTTGCGGAACTCTCGAACAGTCATGGCTTCTGTATGTTGTACTaGGTAAAGAGGCCAGACTGC +
Preference number: 4 (lower is better)
Translates to: GTVLIAIGYLAELSNSHGFCMLY*VKRPDC
Trigger: GCAGTCTGGCCTCTTTACTCAGTACAACATACAGAA...GCCATGACTGTTCGAGAGTTCCGCAAGATAGCCAATAGCGATAAGTACTGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR TCA 90 bp TCTCAGCCGGCCAATATTCCACTCATCAACATGCTTTTCATAGAGGGTACCATTAACTCTCCAGCCTCTTaGGTCACCTTGTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: SQPANIPLINMLFIEGTINSPAS*VTLSKG
Trigger: TCCCTTTGACAAGGTGACTCAAGAGGCTGGAGAGTT...AATGGTACCCTCTATGAAAAGCATGTTGATGAGTGGAATATTGGCCGGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR GCA 90 bp AACATACACGCACGCACGCACGCACGCACACACACACACACATATAAATACAAACGCTATTGGCTATCTTaGGGAACTCTCGAACAGTCA +
Preference number: 4 (lower is better)
Translates to: NIHARTHARTHTHTYKYKRYWLS*GTLEQS
Trigger: TGACTGTTCGAGAGTTCCGCAAGATAGCCAATAGCG...TTTGTATTTATATGTGTGTGTGTGTGTGCGTGCGTGCGTGCGTGCGTGTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp GCTCTTCAAACTCACTATAGCGTGGGGTACAGTACTTATCGCTATTGGCTATCTTCCAACCGCTTTCCATaGTCAGGTGGAACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: ALQTHYSVGYSTYRYWLSSNRFP*SGGTEY
Trigger: GTACTCTGTTCCACCTGAGCATGGAAAGCGGTTGGA...AGATAGCCAATAGCGATAAGTACTGTACCCCACGCTATAGTGAGTTTGAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR GCA 90 bp AACATACACGCACGCACGCACGCACGCACACACACACACACATATAAATACAAATCCGTCATCTCATACTaGTCAGAACTCAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: NIHARTHARTHTHTYKYKSVISY*SELRSS
Trigger: GGAGGATCTGAGTTCTGAGCAGTATGAGATGACGGA...TTTGTATTTATATGTGTGTGTGTGTGTGCGTGCGTGCGTGCGTGCGTGTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp ACTTATCGCTATTGGCTATCTTGCGGAACTCTCGAACAGTCATGGCTTTCTTCTATCAGGGTCATCTTGTaGCGGAGAAATGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: TYRYWLSCGTLEQSWLSSIRVIL*RRNASQ
Trigger: CTGTGAGGCATTTCTCCGCCACAAGATGACCCTGAT...AGAAGAAAGCCATGACTGTTCGAGAGTTCCGCAAGATAGCCAATAGCGATAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR TCA 90 bp TTATCGCTATTGGCTATCTTGCGGAACTCTCGAACAGTCATGGCTTTCTTCTGTTGCATTCTCTCCCCTTaGAGAAAGTCCACATGGGAA +
Preference number: 4 (lower is better)
Translates to: LSLLAILRNSRTVMAFFCCILSP*RKSTWE
Trigger: TTCCCATGTGGACTTTCTTCAAGGGGAGAGAATGCA...ACAGAAGAAAGCCATGACTGTTCGAGAGTTCCGCAAGATAGCCAATAGCGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR GCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAAATTAGGAATCTTGTaGCGAAAGCAGGTAATGAAG +
Preference number: 4 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGKLGIL*RKQVMK
Trigger: CTTCATTACCTGCTTTCGGCACAAGATTCCTAATTT...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GGTACAGTACTTATCGCTATTGGCTATCTTGCGGAACTCTCGAACAGTCATGGCAGTACTTATCGCTATTaGCTATCTTGCGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: GTVLIAIGYLAELSNSHGSTYRY*LSCGTL
Trigger: GAGAGTTCCGCAAGATAGCCAATAGCGATAAGTACT...GCCATGACTGTTCGAGAGTTCCGCAAGATAGCCAATAGCGATAAGTACTGTACC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR CCA 90 bp AACATACACGCACGCACGCACGCACGCACACACACACACACATATAAATACAAACTGACTCACCTCCTGTaGTATTTCAAGACAAACTCG +
Preference number: 4 (lower is better)
Translates to: NIHARTHARTHTHTYKYKLTHLL*YFKTNS
Trigger: CGAGTTTGTCTTGAAATACCACAGGAGGTGAGTCAG...TTTGTATTTATATGTGTGTGTGTGTGTGCGTGCGTGCGTGCGTGCGTGTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR GCA 90 bp AGGTGGCATCAGCTCCTTAGCATCTCAATACTGCAGCTTTGCCAGCACTGTCTTGAGTTGATAACTCGTTaGCGTTTCTTTTCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: RWHQLLSISILQLCQHCLELITR*RFFSCL
Trigger: TAAGCAAGAAAAGAAACGGCAACGAGTTATCAACTC...AAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCGAACTCTTCCATAGTTaGATAAAAGGTCATTATCCT +
Preference number: 4 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGELFHS*IKGHYP
Trigger: AGGATAATGACCTTTTATCCAACTATGGAAGAGTTC...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CCA 90 bp TCCACTCATCAACATGCTTTTCATAGAGGGTACCATTCACATCTGCACCATAGAATCATAGGATGCTCGTaGCTTCCACTCTTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: STHQHAFHRGYHSHLHHRIIGCS*LPLFWR
Trigger: CCTCCAAAAGAGTGGAAGCCACGAGCATCCTATGAT...TCTATGGTGCAGATGTGAATGGTACCCTCTATGAAAAGCATGTTGATGAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR CCA 90 bp AACATACACGCACGCACGCACGCACGCACACACACACACACATATAAATACAAAAGTGAAGCACATTTCTaGAATCAATGGCTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: NIHARTHARTHTHTYKYKSEAHF*NQWLGP
Trigger: AGGACCAAGCCATTGATTCCAGAAATGTGCTTCACT...TTTGTATTTATATGTGTGTGTGTGTGTGCGTGCGTGCGTGCGTGCGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR TCA 90 bp TCCACTCATCAACATGCTTTTCATAGAGGGTACCATTCACATCTGCACCATAGAGAATGGGGGCAGGAATaGCCAAATCATCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: STHQHAFHRGYHSHLHHREWGQE*PNHQCH
Trigger: ATGACATTGATGATTTGGTCATTCCTGCCCCCATTC...TCTATGGTGCAGATGTGAATGGTACCCTCTATGAAAAGCATGTTGATGAGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR TCA 90 bp GAATGTAAGATTTTTCCAGTATTTCCGCTCGAGCTCTTCAAACTCACTATAGCGAATGCCTCACAGCTTTaGGCACTTCCTGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: ECKIFPVFPLELFKLTIANASQL*ALPGKK
Trigger: CTTTTTCCCAGGAAGTGCTCAAAGCTGTGAGGCATT...CGCTATAGTGAGTTTGAAGAGCTCGAGCGGAAATACTGGAAAAATCTTACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR CCA 90 bp GTCCAGGATTGTTCTCAGCCGGCCAATATTCCACTCATCAACATGCTTTTCATAAAACTCACTATAGCGTaGGGTACAGTACTTATCGCT +
Preference number: 4 (lower is better)
Translates to: VQDCSQPANIPLINMLFIKLTIA*GTVLIA
Trigger: AGCGATAAGTACTGTACCCCACGCTATAGTGAGTTT...TATGAAAAGCATGTTGATGAGTGGAATATTGGCCGGCTGAGAACAATCCTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR CCA 90 bp GGATTGAATGTAAGATTTTTCCAGTATTTCCGCTCGAGCTCTTCAAACTCACTACTTTCCATGCTCAGGTaGAACAGAGTACCAGGACTT +
Preference number: 4 (lower is better)
Translates to: GLNVRFFQYFRSSSSNSLLSMLR*NRVPGL
Trigger: AAGTCCTGGTACTCTGTTCCACCTGAGCATGGAAAG...TAGTGAGTTTGAAGAGCTCGAGCGGAAATACTGGAAAAATCTTACATTCAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS CCA 90 bp CCCAAAGCCCCGCCAGGGCTTAGGCTCAGCTCCTGCTGTCGCCACTaGCCGATCCTACTGCTTTTCCAGCAGGCGAAGGCCGAAACTCCG +
Preference number: 5 (lower is better)
Translates to: PKAPPGLRLSSCCRH*PILLLFQQAKAETP
Trigger: CGGAGTTTCGGCCTTCGCCTGCTGGAAAAGCAGTAGGATCGGCCAGTGGCGACAGCAGGAGCTGAGCCTAAGCCCTGGCGGGGCTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp GCCAGGGGCTGGCAGAAGCTGGTCCAGACCAAACATACACGCACGCACGCACGCGCCTGCAGTGATGCTTaGCAAGGCCCCCTTGGCACG +
Preference number: 5 (lower is better)
Translates to: ARGWQKLVQTKHTRTHARACSDA*QGPLGT
Trigger: CGTGCCAAGGGGGCCTTGCAAAGCATCACTGCAGGC...GCGTGCGTGCGTGCGTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp GCCAGGGGCTGGCAGAAGCTGGTCCAGACCAAACATACACGCACGCACGCACGCTCACATGGAAGGCAGTaGGGCAGCGGCCGTGAGAAC +
Preference number: 5 (lower is better)
Translates to: ARGWQKLVQTKHTRTHARSHGRQ*GSGREN
Trigger: GTTCTCACGGCCGCTGCCCAACTGCCTTCCATGTGA...GCGTGCGTGCGTGCGTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CCA 90 bp CATCATCACACCGGCAGCCTGGGCGCAGCTCACATGGAAGGCAGTTaGGCAGCGGCCGTGAGAACACTGCACACAGCAGCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: HHHTGSLGAAHMEGS*AAAVRTLHTAASSS
Trigger: AGAACTGCTGGCTGCTGTGTGCAGTGTTCTCACGGCCGCTGCCCAACTGCCTTCCATGTGAGCTGCGCCCAGGCTGCCGGTGTGATGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS GCA 90 bp AACTTGCCGCACAGAGCTATGGGTGGGCCTCACAGGGGCGAGGGCTaGCGGGCACTCCGTCATCTCATACTGCTCAGAACTCAGATCCTC +
Preference number: 5 (lower is better)
Translates to: NLPHRAMGGPHRGEG*RALRHLILLRTQIL
Trigger: GAGGATCTGAGTTCTGAGCAGTATGAGATGACGGAGTGCCCGGCAGCCCTCGCCCCTGTGAGGCCCACCCATAGCTCTGTGCGGCAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp GCCAGGGGCTGGCAGAAGCTGGTCCAGACCAAACATACACGCACGCACGCACGCCTTGGCTCCATAGACTaGGCCGTCTGTCCATCTCAC +
Preference number: 5 (lower is better)
Translates to: ARGWQKLVQTKHTRTHARLGSID*AVCPSH
Trigger: GTGAGATGGACAGACGGCCAAGTCTATGGAGCCAAG...GCGTGCGTGCGTGCGTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CCA 90 bp CAGGTCTCCTTCCTCTCCATCCTCCACCCCTTCCATGTCCTCCTCTaGGCACTCCTCCTCGTTGCCAGCTCTTGGAGGCAGTTCACTCTC +
Preference number: 5 (lower is better)
Translates to: QVSFLSILHPFHVLL*ALLLVASSWRQFTL
Trigger: GAGAGTGAACTGCCTCCAAGAGCTGGCAACGAGGAGGAGTGCCCAGAGGAGGACATGGAAGGGGTGGAGGATGGAGAGGAAGGAGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp AAGGCAGCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTGGGGCCAGTGCCCTCGTTGCCAGCTCTaGGAGGCAGTTCACTCTCCT +
Preference number: 5 (lower is better)
Translates to: KAASPASIVDPSMDWGQCPRCQL*EAVHSP
Trigger: AGGAGAGTGAACTGCCTCCAAGAGCTGGCAACGAGG...GCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGCCCACCTGTCATCATTaGCTCTCTGCAGGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRPTCHH*LSAGPL
Trigger: GAGGGGCCCTGCAGAGAGCAAATGATGACAGGTGGG...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGCGGGGCAGGGGGATTTaGCTCACATCCACCGGACTT +
Preference number: 5 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRRGRGI*LTSTGL
Trigger: AAGTCCGGTGGATGTGAGCAAAATCCCCCTGCCCCG...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp CTTTGGCGAGGCGTTCCAACCGCTTTCCATGCTCAGGTGGAACAGAGTACCAGGCCCCGTCACCAGCTGTaGAATGGGGGCAGGAATGAC +
Preference number: 5 (lower is better)
Translates to: LWRGVPTAFHAQVEQSTRPRHQL*NGGRND
Trigger: GTCATTCCTGCCCCCATTCAACAGCTGGTGACGGGG...CCTGGTACTCTGTTCCACCTGAGCATGGAAAGCGGTTGGAACGCCTCGCCAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR CAA 90 bp GCCAGGGGCTGGCAGAAGCTGGTCCAGACCAAACATACACGCACGCACGCACGCTCGCTATTGGCTATCTaGCGGAACTCTCGAACAGTC +
Preference number: 5 (lower is better)
Translates to: ARGWQKLVQTKHTRTHARSLLAI*RNSRTV
Trigger: GACTGTTCGAGAGTTCCGCAAGATAGCCAATAGCGA...GCGTGCGTGCGTGCGTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp GCCAGGGGCTGGCAGAAGCTGGTCCAGACCAAACATACACGCACGCACGCACGCCGACGGGTAGCAAAATaGGTAGACTCCGCACAGTTA +
Preference number: 5 (lower is better)
Translates to: ARGWQKLVQTKHTRTHARRRVAK*VDSAQL
Trigger: TAACTGTGCGGAGTCTACCAATTTTGCTACCCGTCG...GCGTGCGTGCGTGCGTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGGGTGCTTGGCCAGGCTaGTCTTCAGGTCTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRGAWPG*SSGLLP
Trigger: AGGAAGGAGACCTGAAGACAAGCCTGGCCAAGCACC...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTAACTCCCGTTTGCCCTaGGGCTCGGCAGGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSNSRLP*GSAGER
Trigger: CCTCTCTCCTGCCGAGCCCAAGGGCAAACGGGAGTT...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGCTCCACCTGGTACATTaGGATAGGGTGGGAGGCCAC +
Preference number: 5 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRLHLVH*DRVGGH
Trigger: GTGGCCTCCCACCCTATCCAAATGTACCAGGTGGAG...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS TCA 90 bp ATGTCTGCTGTGCTGTGGAACCCAGAGTGCTCTTGCCTGGATGGCTaGGAATCCCTTGGACCCTGGAAGCACCTACTCCATGATGGCCCG +
Preference number: 5 (lower is better)
Translates to: MSAVLWNPECSCLDG*ESLGPWKHLLHDGP
Trigger: CGGGCCATCATGGAGTAGGTGCTTCCAGGGTCCAAGGGATTCTCAGCCATCCAGGCAAGAGCACTCTGGGTTCCACAGCACAGCAGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS GCA 90 bp GGGGGACCCCATAGCAACTGGCATGGACCCGGACGCTGCACTTCTTaGAGGAAACGAGTATGCTGGTGCCATCCTCCTCAAGATAAGGAG +
Preference number: 5 (lower is better)
Translates to: GGPHSNWHGPGRCTS*RKRVCWCHPPQDKE
Trigger: CTCCTTATCTTGAGGAGGATGGCACCAGCATACTCGTTTCCTGCAAGAAGTGCAGCGTCCGGGTCCATGCCAGTTGCTATGGGGTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372396.4
ENST00000481296.1
CDS-3UTR CAA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTCCCCGTCACCAGCTGTaGAATGGGGGCAGGAATGAC +
Preference number: 5 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSPRHQL*NGGRND
Trigger: GTCATTCCTGCCCCCATTCAACAGCTGGTGACGGGG...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTAGTGAGAACTCCCGTTaGCCCTTGGGCTCGGCAGGA +
Preference number: 5 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSSENSR*PLGSAG
Trigger: TCCTGCCGAGCCCAAGGGCAAACGGGAGTTCTCACT...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp AAGGCAGCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTGGGGCCAGTGCTCTCAGCCTCAAAGTTaGGAGGTCGGTTCTGCCACA +
Preference number: 5 (lower is better)
Translates to: KAASPASIVDPSMDWGQCSQPQS*EVGSAT
Trigger: TGTGGCAGAACCGACCTCCAAACTTTGAGGCTGAGA...GCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGCGGACGCTGCACTTCTaGCAGGAAACGAGTATGCTG +
Preference number: 5 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRRTLHF*QETSML
Trigger: CAGCATACTCGTTTCCTGCAAGAAGTGCAGCGTCCG...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp GCCAGGGGCTGGCAGAAGCTGGTCCAGACCAAACATACACGCACGCACGCACGCTCCCGGTATCTTGAGTaGATAACTCGTTGCCGTTTC +
Preference number: 5 (lower is better)
Translates to: ARGWQKLVQTKHTRTHARSRYLE*ITRCRF
Trigger: GAAACGGCAACGAGTTATCAACTCAAGATACCGGGA...GCGTGCGTGCGTGCGTGTATGTTTGGTCTGGACCAGCTTCTGCCAGCCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGGAACCCAGAGTGCTCTaGCCTGGATGGCTGAGAATC +
Preference number: 5 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQREPRVL*PGWLRI
Trigger: GATTCTCAGCCATCCAGGCAAGAGCACTCTGGGTTC...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CCA 90 bp CCCTTCCATGTCCTCCTCTGGGCACTCCTCCTCGTTGCCAGCTCTTaGAGGCAGTTCACTCTCCTTAAGAAACTCAGCTGCTTCTGGCGT +
Preference number: 5 (lower is better)
Translates to: PFHVLLWALLLVASS*RQFTLLKKLSCFWR
Trigger: ACGCCAGAAGCAGCTGAGTTTCTTAAGGAGAGTGAACTGCCTCCAAGAGCTGGCAACGAGGAGGAGTGCCCAGAGGAGGACATGGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CCA 90 bp CCGCTCACTGAAACTTCTAGCGGCGCTTCCTTTCTTCCTCGTGCATaGCTCTCCCACAGTGACCCTGCCATCCCCTTTGGCATAACTGTG +
Preference number: 5 (lower is better)
Translates to: PLTETSSGASFLPRA*LSHSDPAIPFGITV
Trigger: CACAGTTATGCCAAAGGGGATGGCAGGGTCACTGTGGGAGAGCCATGCACGAGGAAGAAAGGAAGCGCCGCTAGAAGTTTCAGTGAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CCA 90 bp AATTCCTTCTCAGCCTCAAAGTTTGGAGGTCGGTTCTGCCACAGTTaGCTCAGAGGCTTGGCCCAGGCCTCTGTCTCCTCAGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: NSFSASKFGGRFCHS*LRGLAQASVSSASS
Trigger: GGAAGAGGCTGAGGAGACAGAGGCCTGGGCCAAGCCTCTGAGCCAACTGTGGCAGAACCGACCTCCAAACTTTGAGGCTGAGAAGGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CCA 90 bp AGCGTTCCATGTCTGCTGTGCTGTGGAACCCAGAGTGCTCTTGCCTaGATGGCTGAGAATCCCTTGGACCCTGGAAGCACCTACTCCATG +
Preference number: 5 (lower is better)
Translates to: SVPCLLCCGTQSALA*MAENPLDPGSTYSM
Trigger: CATGGAGTAGGTGCTTCCAGGGTCCAAGGGATTCTCAGCCATCCAGGCAAGAGCACTCTGGGTTCCACAGCACAGCAGACATGGAACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACCTTTGCAAGGCCCCCTaGGCACGCTCCAAATTAGGA +
Preference number: 5 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYLCKAP*ARSKLG
Trigger: TCCTAATTTGGAGCGTGCCAAGGGGGCCTTGCAAAG...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGTCTGCACCTAGAGTGTaGTGGGCACACACCCATGTT +
Preference number: 5 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRSAPRV*WAHTHV
Trigger: AACATGGGTGTGTGCCCACAACACTCTAGGTGCAGA...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACACACCCTGTAATACTTaGCCACAGGGGCTCTGCACC +
Preference number: 5 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYTPCNT*PQGLCT
Trigger: GGTGCAGAGCCCCTGTGGCAAAGTATTACAGGGTGT...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS TCA 90 bp CTTTCCACCTGCTCTATCAGCAGAAAGCTGGCTCTCTTACCGATCTaGCTATGGCTACAGCTCCCGGGTGCACAGCCATTATCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: LSTCSISRKLALLPI*LWLQLPGAQPLSRS
Trigger: GCTCCGGGATAATGGCTGTGCACCCGGGAGCTGTAGCCATAGTCAGATCGGTAAGAGAGCCAGCTTTCTGCTGATAGAGCAGGTGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481296.1
CDS-3UTR CAA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACCCACCAAGTCCAGGATaGTTCTCAGCCGGCCAATAT +
Preference number: 5 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYPPSPG*FSAGQY
Trigger: ATATTGGCCGGCTGAGAACAATCCTGGACTTGGTGG...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp AAGGCAGCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTGGGGCCAGTGCAAGATACATTTCAGTTaGAAGCGGGGCAGGGGGATT +
Preference number: 5 (lower is better)
Translates to: KAASPASIVDPSMDWGQCKIHFS*KRGRGI
Trigger: AATCCCCCTGCCCCGCTTCAAACTGAAATGTATCTT...GCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CCA 90 bp CGTGCCTATGCTCTTAGCTTTCCACCTGCTCTATCAGCAGAAAGCTaGCTCTCTTACCGATCTGACTATGGCTACAGCTCCCGGGTGCAC +
Preference number: 5 (lower is better)
Translates to: RAYALSFPPALSAES*LSYRSDYGYSSRVH
Trigger: GTGCACCCGGGAGCTGTAGCCATAGTCAGATCGGTAAGAGAGCCAGCTTTCTGCTGATAGAGCAGGTGGAAAGCTAAGAGCATAGGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481296.1
CDS-3UTR CAA 90 bp AAGGCAGCCAGTCCAGCCAGCATAGTTGACCCCTCTATGGACTGGGGCCAGTGCCAGTACTTATCGCTATaGGCTATCTTGCGGAACTCT +
Preference number: 5 (lower is better)
Translates to: KAASPASIVDPSMDWGQCQYLSL*AILRNS
Trigger: AGAGTTCCGCAAGATAGCCAATAGCGATAAGTACTG...GCACTGGCCCCAGTCCATAGAGGGGTCAACTATGCTGGCTGGACTGGCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCACCTGGGAAAAAGCCTTaGGCGAGGCGTTCCAACCGC +
Preference number: 5 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVAPGKKP*ARRSNR
Trigger: GCGGTTGGAACGCCTCGCCAAAGGCTTTTTCCCAGG...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp CCCCTGCATGATTGCAATTTTCTGTTGACAGAATCACCCACCAGGCTCTGCCTGGTCCCTATTCGGTGCTaGGCCAGGCTTGTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PLHDCNFLLTESPTRLCLVPIRC*ARLVFR
Trigger: CCTGAAGACAAGCCTGGCCAAGCACCGAATAGGGAC...CAGGCAGAGCCTGGTGGGTGATTCTGTCAACAGAAAATTGCAATCATGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTAAACTCGGTGCCTCTTaGTCCCTATTCGGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSKLGAS*SLFGAW
Trigger: CCAAGCACCGAATAGGGACAAAGAGGCACCGAGTTT...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGACCTTGCTTCCAGAATaGCCACAGCACATGAAACGT +
Preference number: 5 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRTLLPE*PQHMKR
Trigger: ACGTTTCATGTGCTGTGGCAATTCTGGAAGCAAGGT...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS TCA 90 bp TCATACAGACAGCGCAGTGAGGGGCCTGTTGGGCCATGGTCTCATTaGATTCCTTCTCAGCCTCAAAGTTTGGAGGTCGGTTCTGCCACA +
Preference number: 5 (lower is better)
Translates to: SYRQRSEGPVGPWSH*IPSQPQSLEVGSAT
Trigger: TGTGGCAGAACCGACCTCCAAACTTTGAGGCTGAGAAGGAATTCAATGAGACCATGGCCCAACAGGCCCCTCACTGCGCTGTCTGTATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS TCA 90 bp CCTGGATGGCTGAGAATCCCTTGGACCCTGGAAGCACCTACTCCATaGTGGCCCGGTATAGTGCAGGCTCAATATAATCTTCCCGGTATC +
Preference number: 5 (lower is better)
Translates to: PGWLRIPWTLEAPTP*WPGIVQAQYNLPGI
Trigger: GATACCGGGAAGATTATATTGAGCCTGCACTATACCGGGCCATCATGGAGTAGGTGCTTCCAGGGTCCAAGGGATTCTCAGCCATCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CCA 90 bp CCGGGCACTCCGTCATCTCATACTGCTCAGAACTCAGATCCTCCTTaGGGAAGAGCTCACTCTGACTCACCTCCTGTGGTATTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: PGTPSSHTAQNSDPP*GRAHSDSPPVVFQD
Trigger: GTCTTGAAATACCACAGGAGGTGAGTCAGAGTGAGCTCTTCCCCAAGGAGGATCTGAGTTCTGAGCAGTATGAGATGACGGAGTGCCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp CTTTTCCACCAAGTCCAGGATTGTTCTCAGCCGGCCAATATTCCACTCATCAACCCTGGGAAAAAGCCTTaGGCGAGGCGTTCCAACCGC +
Preference number: 5 (lower is better)
Translates to: LFHQVQDCSQPANIPLINPGKKP*ARRSNR
Trigger: GCGGTTGGAACGCCTCGCCAAAGGCTTTTTCCCAGG...GTTGATGAGTGGAATATTGGCCGGCTGAGAACAATCCTGGACTTGGTGGAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR CAA 90 bp CCCCTGCATGATTGCAATTTTCTGTTGACAGAATCACCCACCAGGCTCTGCCTGCACAGCACAGCTTGCTaGCCGTACTCAATCCACCGA +
Preference number: 5 (lower is better)
Translates to: PLHDCNFLLTESPTRLCLHSTAC*PYSIHR
Trigger: TCGGTGGATTGAGTACGGCAAGCAAGCTGTGCTGTG...CAGGCAGAGCCTGGTGGGTGATTCTGTCAACAGAAAATTGCAATCATGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGGCAGTGAGGGGCCTGTaGGGCCATGGTCTCATTGAA +
Preference number: 5 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMAVRGL*GHGLIE
Trigger: TTCAATGAGACCATGGCCCAACAGGCCCCTCACTGC...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTCGCCCGTTCTTATGCTaGCTAATGACTTTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSRPFLC*LMTFWP
Trigger: AGGCCAGAAAGTCATTAGCAAGCATAAGAACGGGCG...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp GATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAGCGGTCTGTGAAAATCTCATaGAAGCGCATGTCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: DQRLLPRAQKWLVLSLQRSVKIS*KRMSEA
Trigger: AGCCTCAGACATGCGCTTCAATGAGATTTTCACAGA...CCGCTGTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACAAATGCCTCACAGCTTaGAGCACTTCCTGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYKCLTA*STSWEK
Trigger: TTTTTCCCAGGAAGTGCTCAAAGCTGTGAGGCATTT...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGGGAGCACAGCACAGCTaGCTTGCCGTACTCAATCCA +
Preference number: 5 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMGAQHS*LAVLNP
Trigger: TGGATTGAGTACGGCAAGCAAGCTGTGCTGTGCTCC...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGTCTGGAATCAATGGCTaGGTCCTCTGCTTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMSGING*VLCFWG
Trigger: CCCCCAGAAGCAGAGGACCAAGCCATTGATTCCAGA...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCATCCTCCTCTAGGGCATaGGCTGAACACCGAGAACAC +
Preference number: 5 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVASSSRA*AEHREH
Trigger: GTGTTCTCGGTGTTCAGCCAATGCCCTAGAGGAGGA...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAATGGCTGAGAATCCCTaGGACCCTGGAAGCACCTAC +
Preference number: 5 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVAMAENP*DPGSTY
Trigger: GTAGGTGCTTCCAGGGTCCAAGGGATTCTCAGCCAT...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CCA 90 bp AGCTCTTGGAGGCAGTTCACTCTCCTTAAGAAACTCAGCTGCTTCTaGCGTGGGCAGAGTATGGTCAATAACTGTGTTGTCCTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: SSWRQFTLLKKLSCF*RGQSMVNNCVVLPS
Trigger: GCTGGGAAGGACAACACAGTTATTGACCATACTCTGCCCACGCCAGAAGCAGCTGAGTTTCTTAAGGAGAGTGAACTGCCTCCAAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp CCCCTGCATGATTGCAATTTTCTGTTGACAGAATCACCCACCAGGCTCTGCCTGTGCCCGATGAGCTCCTaGGGATTCAATGTAGGCAAT +
Preference number: 5 (lower is better)
Translates to: PLHDCNFLLTESPTRLCLCPMSS*GFNVGN
Trigger: ATTGCCTACATTGAATCCCAAGGAGCTCATCGGGCA...CAGGCAGAGCCTGGTGGGTGATTCTGTCAACAGAAAATTGCAATCATGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp GTGATCCCACTCTCCTTTTCCACCAAGTCCAGGATTGTTCTCAGCCGGCCAATATCGCTATTGGCTATCTaGCGGAACTCTCGAACAGTC +
Preference number: 5 (lower is better)
Translates to: VIPLSFSTKSRIVLSRPISLLAI*RNSRTV
Trigger: GACTGTTCGAGAGTTCCGCAAGATAGCCAATAGCGA...TATTGGCCGGCTGAGAACAATCCTGGACTTGGTGGAAAAGGAGAGTGGGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR CAA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGAAGACCATCCTCAACTaGCCGCACAGAGCTATGGGT +
Preference number: 5 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMKTILN*PHRAMG
Trigger: ACCCATAGCTCTGTGCGGCAAGTTGAGGATGGTCTT...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp TGGGAGATCAGCGACTGCTGCCACGTGCCCAGAAATGGCTCGTCCTTTCACTACCTTCTTTCTGCAATGTaGACAAACCTTGCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: WEISDCCHVPRNGSSFHYLLSAM*TNLASR
Trigger: TCTGGAAGCAAGGTTTGTCAACATTGCAGAAAGAAG...GTAGTGAAAGGACGAGCCATTTCTGGGCACGTGGCAGCAGTCGCTGATCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp CCGATTCAGGGTAATCCCCACCCACACCCTGTAATACTTTGCCACAGGGGCTCTCTAGATTTGACTCTCTaGGGAAGCTCTTCATCCAGT +
Preference number: 5 (lower is better)
Translates to: PIQGNPHPHPVILCHRGSLDLTL*GSSSSS
Trigger: ACTGGATGAAGAGCTTCCCAAGAGAGTCAAATCTAG...AGAGCCCCTGTGGCAAAGTATTACAGGGTGTGGGTGGGGATTACCCTGAATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS GCA 90 bp GTTGCCAGCTCTTGGAGGCAGTTCACTCTCCTTAAGAAACTCAGCTaGTTCTGGCGTGGGCAGAGTATGGTCAATAACTGTGTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: VASSWRQFTLLKKLS*FWRGQSMVNNCVVL
Trigger: AAGGACAACACAGTTATTGACCATACTCTGCCCACGCCAGAAGCAGCTGAGTTTCTTAAGGAGAGTGAACTGCCTCCAAGAGCTGGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS GCA 90 bp AAAGCTGGCTCTCTTACCGATCTGACTATGGCTACAGCTCCCGGGTaGACAGCCATTATCCCGGAGCTGCTAATTGAAGTTACCTGTAAT +
Preference number: 5 (lower is better)
Translates to: KAGSLTDLTMATAPG*TAIIPELLIEVTCN
Trigger: ATTACAGGTAACTTCAATTAGCAGCTCCGGGATAATGGCTGTGCACCCGGGAGCTGTAGCCATAGTCAGATCGGTAAGAGAGCCAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481296.1
CDS-3UTR CAA 90 bp TCAAATTACAAGGACCAGAATACTCATGTTGGCTGGCCAGTGCATTCTCTCCCCCCACCAAGTCCAGGATaGTTCTCAGCCGGCCAATAT +
Preference number: 5 (lower is better)
Translates to: SNYKDQNTHVGWPVHSLPPPSPG*FSAGQY
Trigger: ATATTGGCCGGCTGAGAACAATCCTGGACTTGGTGG...GGGGAGAGAATGCACTGGCCAGCCAACATGAGTATTCTGGTCCTTGTAATTTGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR CAA 90 bp CTGCCCCGTCACCAGCTGTTGAATGGGGGCAGGAATGACCAAATCATCAATGTCAAATGCCTCACAGCTTaGAGCACTTCCTGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: LPRHQLLNGGRNDQIINVKCLTA*STSWEK
Trigger: TTTTTCCCAGGAAGTGCTCAAAGCTGTGAGGCATTT...GACATTGATGATTTGGTCATTCCTGCCCCCATTCAACAGCTGGTGACGGGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR CAA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAGAAATCAGGGTCATCTaGTGGCGGAGAAATGCCTCA +
Preference number: 5 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVAEIRVI*WRRNAS
Trigger: TGAGGCATTTCTCCGCCACAAGATGACCCTGATTTC...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp CCCCTGCATGATTGCAATTTTCTGTTGACAGAATCACCCACCAGGCTCTGCCTGCCAGCTTTCCAAAGTTaGTACCTTTCTGGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: PLHDCNFLLTESPTRLCLPAFQS*YLSGWN
Trigger: GTTCCAGCCAGAAAGGTACAAACTTTGGAAAGCTGG...CAGGCAGAGCCTGGTGGGTGATTCTGTCAACAGAAAATTGCAATCATGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCATGGGCCATGGTCTCATaGAATTCCTTCTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVAWAMVS*NSFSAS
Trigger: TGAGGCTGAGAAGGAATTCAATGAGACCATGGCCCA...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp AACATACACGCACGCACGCACGCACGCACACACACACACACATATAAATACAAATTAACCCCTTCAGTATaGCCCTCTAGTCCCACCCCC +
Preference number: 5 (lower is better)
Translates to: NIHARTHARTHTHTYKYKLTPSV*PSSPTP
Trigger: GGGGGTGGGACTAGAGGGCAATACTGAAGGGGTTAA...TTTGTATTTATATGTGTGTGTGTGTGTGCGTGCGTGCGTGCGTGCGTGTATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS TCA 90 bp TCATACTGCTCAGAACTCAGATCCTCCTTGGGGAAGAGCTCACTCTaGCTCACCTCCTGTGGTATTTCAAGACAAACTCGGTGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: SYCSELRSSLGKSSL*LTSCGISRQTRCLF
Trigger: AAAGAGGCACCGAGTTTGTCTTGAAATACCACAGGAGGTGAGTCAGAGTGAGCTCTTCCCCAAGGAGGATCTGAGTTCTGAGCAGTATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS TCA 90 bp GCCTCCAAATTCAACCTAAGGGGAAAGAACAAGTGTACACCTCAGTaGGCACGTGCCTATGCTCTTAGCTTTCCACCTGCTCTATCAGCA +
Preference number: 5 (lower is better)
Translates to: ASKFNLRGKNKCTPQ*ARAYALSFPPALSA
Trigger: TGCTGATAGAGCAGGTGGAAAGCTAAGAGCATAGGCACGTGCTCACTGAGGTGTACACTTGTTCTTTCCCCTTAGGTTGAATTTGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481296.1
CDS CCA 90 bp AAAGGGTACAGGTTAACACAGTGCTCCACACTAGCTCCGCAATCCTaGAGTCACTTCACACCTGTGCTTCTCATCGGAATGATAAAGAGG +
Preference number: 5 (lower is better)
Translates to: KGYRLTQCSTLAPQS*SHFTPVLLIGMIKR
Trigger: CCTCTTTATCATTCCGATGAGAAGCACAGGTGTGAAGTGACTCCAGGATTGCGGAGCTAGTGTGGAGCACTGTGTTAACCTGTACCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472265.1
CDS-3UTR CAA 90 bp GGGTACAGTACTTATCGCTATTGGCTATCTTGCGGAACTCTCGAACAGTCATGGGAAATCAGGGTCATCTaGTGGCGGAGAAATGCCTCA +
Preference number: 5 (lower is better)
Translates to: GYSTYRYWLSCGTLEQSWEIRVI*WRRNAS
Trigger: TGAGGCATTTCTCCGCCACAAGATGACCCTGATTTC...CCATGACTGTTCGAGAGTTCCGCAAGATAGCCAATAGCGATAAGTACTGTACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR CAA 90 bp GCACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCGATTGCAATTTTCTGTaGACAGAATCACCCACCAGG +
Preference number: 5 (lower is better)
Translates to: AHTHVIPMFSFRGRQRGGDCNFL*TESPTR
Trigger: CCTGGTGGGTGATTCTGTCAACAGAAAATTGCAATC...GCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp AGGTGGCATCAGCTCCTTAGCATCTCAATACTGCAGCTTTGCCAGCACTGTCTTTGGTCAATAACTGTGTaGTCCTTCCCAGCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: RWHQLLSISILQLCQHCLWSITV*SFPAFQ
Trigger: TTGGAAAGCTGGGAAGGACAACACAGTTATTGACCA...AAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CCA 90 bp TCACTCTCCTTAAGAAACTCAGCTGCTTCTGGCGTGGGCAGAGTATaGTCAATAACTGTGTTGTCCTTCCCAGCTTTCCAAAGTTTGTAC +
Preference number: 5 (lower is better)
Translates to: SLSLRNSAASGVGRV*SITVLSFPAFQSLY
Trigger: GTACAAACTTTGGAAAGCTGGGAAGGACAACACAGTTATTGACCATACTCTGCCCACGCCAGAAGCAGCTGAGTTTCTTAAGGAGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCAGAAGATGATTTCTTTTaGGAGCCTGAGAAGACAAGG +
Preference number: 5 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVAEDDFF*EPEKTR
Trigger: CCTTGTCTTCTCAGGCTCCAAAAAGAAATCATCTTC...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp CACACACCCATGTTATCCCCATGTTCTCCTTTAGGGGAAGACAAAGAGGTGGCATCCAAATTAGGAATCTaGTGCCGAAAGCAGGTAATG +
Preference number: 5 (lower is better)
Translates to: HTPMLSPCSPLGEDKEVASKLGI*CRKQVM
Trigger: CATTACCTGCTTTCGGCACAAGATTCCTAATTTGGA...TGCCACCTCTTTGTCTTCCCCTAAAGGAGAACATGGGGATAACATGGGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp AAATGGCTCGTCCTTTCACTACAGCGGAATGCAATGAGGGTGGGTGAGAAGATGGCAGAATTTCACATTTaGTTTGCCCTGCATAGGCAA +
Preference number: 5 (lower is better)
Translates to: KWLVLSLQRNAMRVGEKMAEFHI*FALHRQ
Trigger: TTGCCTATGCAGGGCAAACAAAATGTGAAATTCTGC...CATCTTCTCACCCACCCTCATTGCATTCCGCTGTAGTGAAAGGACGAGCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp TCTCAGCCGGCCAATATTCCACTCATCAACATGCTTTTCATAGAGGGTACCATTGTGCATTCTCTCCCCTaGAAGAAAGTCCACATGGGA +
Preference number: 5 (lower is better)
Translates to: SQPANIPLINMLFIEGTIVHSLP*KKVHMG
Trigger: TCCCATGTGGACTTTCTTCAAGGGGAGAGAATGCAC...AATGGTACCCTCTATGAAAAGCATGTTGATGAGTGGAATATTGGCCGGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS-3UTR CAA 90 bp AGGTGGCATCAGCTCCTTAGCATCTCAATACTGCAGCTTTGCCAGCACTGTCTTCAGGCAAACAAATTCTaGAGGAGCAAAAACCTGTTT +
Preference number: 5 (lower is better)
Translates to: RWHQLLSISILQLCQHCLQANKF*RSKNLF
Trigger: AAACAGGTTTTTGCTCCTCAAGAATTTGTTTGCCTG...AAGACAGTGCTGGCAAAGCTGCAGTATTGAGATGCTAAGGAGCTGATGCCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS-3UTR CAA 90 bp TCTCAGCCGGCCAATATTCCACTCATCAACATGCTTTTCATAGAGGGTACCATTCAGTACTTATCGCTATaGGCTATCTTGCGGAACTCT +
Preference number: 5 (lower is better)
Translates to: SQPANIPLINMLFIEGTIQYLSL*AILRNS
Trigger: AGAGTTCCGCAAGATAGCCAATAGCGATAAGTACTG...AATGGTACCCTCTATGAAAAGCATGTTGATGAGTGGAATATTGGCCGGCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485249.1
CDS GCA 90 bp TCTTCCCGGTATCTTGAGTTGATAACTCGTTGCCGTTTCTTTTCTTaGTTAACCTCTTTCTCTGTGAAAATCTCATTGAAGCGCATGTCT +
Preference number: 5 (lower is better)
Translates to: SSRYLELITRCRFFS*LTSFSVKISLKRMS
Trigger: AGACATGCGCTTCAATGAGATTTTCACAGAGAAAGAGGTTAAGCAAGAAAAGAAACGGCAACGAGTTATCAACTCAAGATACCGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CCA 72 bp ACCGGCAGCCTGGGCGCAGCTCACATGGAAGGCAGTTaGGCAGCGGCCGTGAGAACACTGCACACAGCAGCC +
Preference number: 6 (lower is better)
Translates to: TGSLGAAHMEGS*AAAVRTLHTAA
Trigger: GGCTGCTGTGTGCAGTGTTCTCACGGCCGCTGCCCAACTGCCTTCCATGTGAGCTGCGCCCAGGCTGCCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 72 bp CACCGGCAGCCTGGGCGCAGCTCACATGGAAGGCAGTaGGGCAGCGGCCGTGAGAACACTGCACACAGCAGC +
Preference number: 6 (lower is better)
Translates to: HRQPGRSSHGRQ*GSGRENTAHSS
Trigger: GCTGCTGTGTGCAGTGTTCTCACGGCCGCTGCCCAACTGCCTTCCATGTGAGCTGCGCCCAGGCTGCCGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CCA 72 bp CCGCCAGGGCTTAGGCTCAGCTCCTGCTGTCGCCACTaGCCGATCCTACTGCTTTTCCAGCAGGCGAAGGCC +
Preference number: 6 (lower is better)
Translates to: PPGLRLSSCCRH*PILLLFQQAKA
Trigger: GGCCTTCGCCTGCTGGAAAAGCAGTAGGATCGGCCAGTGGCGACAGCAGGAGCTGAGCCTAAGCCCTGGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS GCA 72 bp GGCTCAGCTCCTGCTGTCGCCACTGGCCGATCCTACTaGTTTTCCAGCAGGCGAAGGCCGAAACTCCGCCTC +
Preference number: 6 (lower is better)
Translates to: GSAPAVATGRSY*FSSRRRPKLRL
Trigger: GAGGCGGAGTTTCGGCCTTCGCCTGCTGGAAAAGCAGTAGGATCGGCCAGTGGCGACAGCAGGAGCTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 90 bp GCATCATCACACCGGCAGCCTGGGCGCAGCTCACATGGAAGGCAGTaGGGCAGCGGCCGTGAGAACACTGCACACAGCAGCCAGCAGTTC +
Preference number: 6 (lower is better)
Translates to: ASSHRQPGRSSHGRQ*GSGRENTAHSSQQF
Trigger: GAACTGCTGGCTGCTGTGTGCAGTGTTCTCACGGCCGCTGCCCAACTGCCTTCCATGTGAGCTGCGCCCAGGCTGCCGGTGTGATGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS GCA 72 bp CACAGAGCTATGGGTGGGCCTCACAGGGGCGAGGGCTaGCGGGCACTCCGTCATCTCATACTGCTCAGAACT +
Preference number: 6 (lower is better)
Translates to: HRAMGGPHRGEG*RALRHLILLRT
Trigger: AGTTCTGAGCAGTATGAGATGACGGAGTGCCCGGCAGCCCTCGCCCCTGTGAGGCCCACCCATAGCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS GCA 72 bp GGGGGACCCCATAGCAACTGGCATGGACCCGGACGCTaGACTTCTTGCAGGAAACGAGTATGCTGGTGCCAT +
Preference number: 6 (lower is better)
Translates to: GGPHSNWHGPGR*TSCRKRVCWCH
Trigger: ATGGCACCAGCATACTCGTTTCCTGCAAGAAGTGCAGCGTCCGGGTCCATGCCAGTTGCTATGGGGTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372396.4
ENST00000481296.1
CDS CCA 72 bp GAAACTTCTAGCGGCGCTTCCTTTCTTCCTCGTGCATaGCTCTCCCACAGTGACCCTGCCATCCCCTTTGGC +
Preference number: 6 (lower is better)
Translates to: ETSSGASFLPRA*LSHSDPAIPFG
Trigger: GCCAAAGGGGATGGCAGGGTCACTGTGGGAGAGCCATGCACGAGGAAGAAAGGAAGCGCCGCTAGAAGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CCA 72 bp TCAGCCTCAAAGTTTGGAGGTCGGTTCTGCCACAGTTaGCTCAGAGGCTTGGCCCAGGCCTCTGTCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SASKFGGRFCHS*LRGLAQASVSS
Trigger: TGAGGAGACAGAGGCCTGGGCCAAGCCTCTGAGCCAACTGTGGCAGAACCGACCTCCAAACTTTGAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 90 bp TTCAGTGGAGTCAGAATAATCTGGGAAGGTAAGACCATCCTCAACTaGCCGCACAGAGCTATGGGTGGGCCTCACAGGGGCGAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: FSGVRIIWEGKTILN*PHRAMGGPHRGEGC
Trigger: GCAGCCCTCGCCCCTGTGAGGCCCACCCATAGCTCTGTGCGGCAAGTTGAGGATGGTCTTACCTTCCCAGATTATTCTGACTCCACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 90 bp GAATTCCTTCTCAGCCTCAAAGTTTGGAGGTCGGTTCTGCCACAGTaGGCTCAGAGGCTTGGCCCAGGCCTCTGTCTCCTCAGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: EFLLSLKVWRSVLPQ*AQRLGPGLCLLSLF
Trigger: GAAGAGGCTGAGGAGACAGAGGCCTGGGCCAAGCCTCTGAGCCAACTGTGGCAGAACCGACCTCCAAACTTTGAGGCTGAGAAGGAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS TCA 72 bp CGCTTCCTTTCTTCCTCGTGCATGGCTCTCCCACAGTaGCCCTGCCATCCCCTTTGGCATAACTGTGCACAG +
Preference number: 6 (lower is better)
Translates to: RFLSSSCMALPQ*PCHPLWHNCAQ
Trigger: CTGTGCACAGTTATGCCAAAGGGGATGGCAGGGTCACTGTGGGAGAGCCATGCACGAGGAAGAAAGGAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS TCA 72 bp GTGCTGTGGAACCCAGAGTGCTCTTGCCTGGATGGCTaGGAATCCCTTGGACCCTGGAAGCACCTACTCCAT +
Preference number: 6 (lower is better)
Translates to: VLWNPECSCLDG*ESLGPWKHLLH
Trigger: ATGGAGTAGGTGCTTCCAGGGTCCAAGGGATTCTCAGCCATCCAGGCAAGAGCACTCTGGGTTCCACAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS GCA 72 bp ACTCCTGCAGCACAAGTGGGTGATGGCGGGGGAGCTTaGTTAAAGGCTGACGGCGTCCCTTGGACTTCTTAT +
Preference number: 6 (lower is better)
Translates to: TPAAQVGDGGGA*LKADGVPWTSY
Trigger: ATAAGAAGTCCAAGGGACGCCGTCAGCCTTTAAGCAAGCTCCCCCGCCATCACCCACTTGTGCTGCAGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CCA 72 bp GTCCTCCTCTGGGCACTCCTCCTCGTTGCCAGCTCTTaGAGGCAGTTCACTCTCCTTAAGAAACTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: VLLWALLLVASS*RQFTLLKKLSC
Trigger: GCAGCTGAGTTTCTTAAGGAGAGTGAACTGCCTCCAAGAGCTGGCAACGAGGAGGAGTGCCCAGAGGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 72 bp CCCTTTGGCATAACTGTGCACAGTGAGAACTCCCGTTaGCCCTTGGGCTCGGCAGGAGAGAGGCTCACTAGT +
Preference number: 6 (lower is better)
Translates to: PFGITVHSENSR*PLGSAGERLTS
Trigger: ACTAGTGAGCCTCTCTCCTGCCGAGCCCAAGGGCAAACGGGAGTTCTCACTGTGCACAGTTATGCCAAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 72 bp GATAGGGTGGGAGGCCACAAACTTGGCTCCATAGACTaGGCCGTCTGTCCATCTCACTTGGACCACTTCCCC +
Preference number: 6 (lower is better)
Translates to: DRVGGHKLGSID*AVCPSHLDHFP
Trigger: GGGGAAGTGGTCCAAGTGAGATGGACAGACGGCCAAGTCTATGGAGCCAAGTTTGTGGCCTCCCACCCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 90 bp GGCCACAAACTTGGCTCCATAGACTTGGCCGTCTGTCCATCTCACTaGGACCACTTCCCCTTCAGCAGGAGGACCAAACTGGAGACAGTC +
Preference number: 6 (lower is better)
Translates to: GHKLGSIDLAVCPSH*DHFPFSRRTKLETV
Trigger: GACTGTCTCCAGTTTGGTCCTCCTGCTGAAGGGGAAGTGGTCCAAGTGAGATGGACAGACGGCCAAGTCTATGGAGCCAAGTTTGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 90 bp ACTTCAGCGTTCCATGTCTGCTGTGCTGTGGAACCCAGAGTGCTCTaGCCTGGATGGCTGAGAATCCCTTGGACCCTGGAAGCACCTACT +
Preference number: 6 (lower is better)
Translates to: TSAFHVCCAVEPRVL*PGWLRIPWTLEAPT
Trigger: AGTAGGTGCTTCCAGGGTCCAAGGGATTCTCAGCCATCCAGGCAAGAGCACTCTGGGTTCCACAGCACAGCAGACATGGAACGCTGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS TCA 72 bp CAGCGCAGTGAGGGGCCTGTTGGGCCATGGTCTCATTaGATTCCTTCTCAGCCTCAAAGTTTGGAGGTCGGT +
Preference number: 6 (lower is better)
Translates to: QRSEGPVGPWSH*IPSQPQSLEVG
Trigger: ACCGACCTCCAAACTTTGAGGCTGAGAAGGAATTCAATGAGACCATGGCCCAACAGGCCCCTCACTGCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS GCA 72 bp CATAGCAACTGGCATGGACCCGGACGCTGCACTTCTTaGAGGAAACGAGTATGCTGGTGCCATCCTCCTCAA +
Preference number: 6 (lower is better)
Translates to: HSNWHGPGRCTS*RKRVCWCHPPQ
Trigger: TTGAGGAGGATGGCACCAGCATACTCGTTTCCTGCAAGAAGTGCAGCGTCCGGGTCCATGCCAGTTGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372396.4
ENST00000481296.1
CDS CAA 72 bp GTCAGAATAATCTGGGAAGGTAAGACCATCCTCAACTaGCCGCACAGAGCTATGGGTGGGCCTCACAGGGGC +
Preference number: 6 (lower is better)
Translates to: VRIIWEGKTILN*PHRAMGGPHRG
Trigger: GCCCCTGTGAGGCCCACCCATAGCTCTGTGCGGCAAGTTGAGGATGGTCTTACCTTCCCAGATTATTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 90 bp GTACATTTGGATAGGGTGGGAGGCCACAAACTTGGCTCCATAGACTaGGCCGTCTGTCCATCTCACTTGGACCACTTCCCCTTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: VHLDRVGGHKLGSID*AVCPSHLDHFPFSR
Trigger: CCTGCTGAAGGGGAAGTGGTCCAAGTGAGATGGACAGACGGCCAAGTCTATGGAGCCAAGTTTGTGGCCTCCCACCCTATCCAAATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 90 bp GAATCCCGTGAAGAGCCAGAGCCCAGGCTAGAAGATGATTTCTTTTaGGAGCCTGAGAAGACAAGGCGTCCCCCTACAGACGCAGGATTC +
Preference number: 6 (lower is better)
Translates to: ESREEPEPRLEDDFF*EPEKTRRPPTDAGF
Trigger: GAATCCTGCGTCTGTAGGGGGACGCCTTGTCTTCTCAGGCTCCAAAAAGAAATCATCTTCTAGCCTGGGCTCTGGCTCTTCACGGGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS TCA 72 bp TGCTCTATCAGCAGAAAGCTGGCTCTCTTACCGATCTaGCTATGGCTACAGCTCCCGGGTGCACAGCCATTA +
Preference number: 6 (lower is better)
Translates to: CSISRKLALLPI*LWLQLPGAQPL
Trigger: TAATGGCTGTGCACCCGGGAGCTGTAGCCATAGTCAGATCGGTAAGAGAGCCAGCTTTCTGCTGATAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481296.1
CDS CCA 72 bp CCGTCATCTCATACTGCTCAGAACTCAGATCCTCCTTaGGGAAGAGCTCACTCTGACTCACCTCCTGTGGTA +
Preference number: 6 (lower is better)
Translates to: PSSHTAQNSDPP*GRAHSDSPPVV
Trigger: TACCACAGGAGGTGAGTCAGAGTGAGCTCTTCCCCAAGGAGGATCTGAGTTCTGAGCAGTATGAGATGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 72 bp GAAGAGCCAGAGCCCAGGCTAGAAGATGATTTCTTTTaGGAGCCTGAGAAGACAAGGCGTCCCCCTACAGAC +
Preference number: 6 (lower is better)
Translates to: EEPEPRLEDDFF*EPEKTRRPPTD
Trigger: GTCTGTAGGGGGACGCCTTGTCTTCTCAGGCTCCAAAAAGAAATCATCTTCTAGCCTGGGCTCTGGCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 90 bp CCCGTTCTTATGCTTGCTAATGACTTTCTGGCCTGCAGTGATGCTTaGCAAGGCCCCCTTGGCACGCTCCAAATTAGGAATCTTGTGCCG +
Preference number: 6 (lower is better)
Translates to: PVLMLANDFLACSDA*QGPLGTLQIRNLVP
Trigger: CGGCACAAGATTCCTAATTTGGAGCGTGCCAAGGGGGCCTTGCAAAGCATCACTGCAGGCCAGAAAGTCATTAGCAAGCATAAGAACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS GCA 72 bp AAGGCCCCCTTGGCACGCTCCAAATTAGGAATCTTGTaGCGAAAGCAGGTAATGAAGACCACAAAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: KAPLARSKLGIL*RKQVMKTTKGQ
Trigger: CTGGCCTTTTGTGGTCTTCATTACCTGCTTTCGGCACAAGATTCCTAATTTGGAGCGTGCCAAGGGGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS GCA 72 bp TGCTTGCTAATGACTTTCTGGCCTGCAGTGATGCTTTaGAAGGCCCCCTTGGCACGCTCCAAATTAGGAATC +
Preference number: 6 (lower is better)
Translates to: CLLMTFWPAVML*KAPLARSKLGI
Trigger: GATTCCTAATTTGGAGCGTGCCAAGGGGGCCTTGCAAAGCATCACTGCAGGCCAGAAAGTCATTAGCAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS GCA 72 bp TCTCTTACCGATCTGACTATGGCTACAGCTCCCGGGTaGACAGCCATTATCCCGGAGCTGCTAATTGAAGTT +
Preference number: 6 (lower is better)
Translates to: SLTDLTMATAPG*TAIIPELLIEV
Trigger: AACTTCAATTAGCAGCTCCGGGATAATGGCTGTGCACCCGGGAGCTGTAGCCATAGTCAGATCGGTAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481296.1
CDS CCA 72 bp AGGTTAACACAGTGCTCCACACTAGCTCCGCAATCCTaGAGTCACTTCACACCTGTGCTTCTCATCGGAATG +
Preference number: 6 (lower is better)
Translates to: RLTQCSTLAPQS*SHFTPVLLIGM
Trigger: CATTCCGATGAGAAGCACAGGTGTGAAGTGACTCCAGGATTGCGGAGCTAGTGTGGAGCACTGTGTTAACCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472265.1
CDS CCA 72 bp GCTCTTAGCTTTCCACCTGCTCTATCAGCAGAAAGCTaGCTCTCTTACCGATCTGACTATGGCTACAGCTCC +
Preference number: 6 (lower is better)
Translates to: ALSFPPALSAES*LSYRSDYGYSS
Trigger: GGAGCTGTAGCCATAGTCAGATCGGTAAGAGAGCCAGCTTTCTGCTGATAGAGCAGGTGGAAAGCTAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481296.1
CDS CAA 72 bp TGCAAGGCCCCCTTGGCACGCTCCAAATTAGGAATCTaGTGCCGAAAGCAGGTAATGAAGACCACAAAAGGC +
Preference number: 6 (lower is better)
Translates to: CKAPLARSKLGI*CRKQVMKTTKG
Trigger: GCCTTTTGTGGTCTTCATTACCTGCTTTCGGCACAAGATTCCTAATTTGGAGCGTGCCAAGGGGGCCTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 90 bp GGCAGGGGGATTTTGCTCACATCCACCGGACTTCTTTCTGCAATGTaGACAAACCTTGCTTCCAGAATTGCCACAGCACATGAAACGTGG +
Preference number: 6 (lower is better)
Translates to: GRGILLTSTGLLSAM*TNLASRIATAHETW
Trigger: CCACGTTTCATGTGCTGTGGCAATTCTGGAAGCAAGGTTTGTCAACATTGCAGAAAGAAGTCCGGTGGATGTGAGCAAAATCCCCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS TCA 72 bp TCAGAACTCAGATCCTCCTTGGGGAAGAGCTCACTCTaGCTCACCTCCTGTGGTATTTCAAGACAAACTCGG +
Preference number: 6 (lower is better)
Translates to: SELRSSLGKSSL*LTSCGISRQTR
Trigger: CCGAGTTTGTCTTGAAATACCACAGGAGGTGAGTCAGAGTGAGCTCTTCCCCAAGGAGGATCTGAGTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS TCA 72 bp CTGAGAATCCCTTGGACCCTGGAAGCACCTACTCCATaGTGGCCCGGTATAGTGCAGGCTCAATATAATCTT +
Preference number: 6 (lower is better)
Translates to: LRIPWTLEAPTP*WPGIVQAQYNL
Trigger: AAGATTATATTGAGCCTGCACTATACCGGGCCATCATGGAGTAGGTGCTTCCAGGGTCCAAGGGATTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 72 bp ATGCTTGCTAATGACTTTCTGGCCTGCAGTGATGCTTaGCAAGGCCCCCTTGGCACGCTCCAAATTAGGAAT +
Preference number: 6 (lower is better)
Translates to: MLANDFLACSDA*QGPLGTLQIRN
Trigger: ATTCCTAATTTGGAGCGTGCCAAGGGGGCCTTGCAAAGCATCACTGCAGGCCAGAAAGTCATTAGCAAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 90 bp AACTCAGCTGCTTCTGGCGTGGGCAGAGTATGGTCAATAACTGTGTaGTCCTTCCCAGCTTTCCAAAGTTTGTACCTTTCTGGCTGGAAC +
Preference number: 6 (lower is better)
Translates to: NSAASGVGRVWSITV*SFPAFQSLYLSGWN
Trigger: GTTCCAGCCAGAAAGGTACAAACTTTGGAAAGCTGGGAAGGACAACACAGTTATTGACCATACTCTGCCCACGCCAGAAGCAGCTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 90 bp ATGATAAGTCTGGAAGATCATACAGACAGCGCAGTGAGGGGCCTGTaGGGCCATGGTCTCATTGAATTCCTTCTCAGCCTCAAAGTTTGG +
Preference number: 6 (lower is better)
Translates to: MISLEDHTDSAVRGL*GHGLIEFLLSLKVW
Trigger: CCAAACTTTGAGGCTGAGAAGGAATTCAATGAGACCATGGCCCAACAGGCCCCTCACTGCGCTGTCTGTATGATCTTCCAGACTTATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS TCA 72 bp GTTGACAAACCTTGCTTCCAGAATTGCCACAGCACATaGAACGTGGACCCACCTGTCATCATTTGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: VDKPCFQNCHST*NVDPPVIICSL
Trigger: CAGAGAGCAAATGATGACAGGTGGGTCCACGTTTCATGTGCTGTGGCAATTCTGGAAGCAAGGTTTGTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS GCA 72 bp TCTTGGAGGCAGTTCACTCTCCTTAAGAAACTCAGCTaGTTCTGGCGTGGGCAGAGTATGGTCAATAACTGT +
Preference number: 6 (lower is better)
Translates to: SWRQFTLLKKLS*FWRGQSMVNNC
Trigger: ACAGTTATTGACCATACTCTGCCCACGCCAGAAGCAGCTGAGTTTCTTAAGGAGAGTGAACTGCCTCCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CCA 72 bp AGGCAGTTCACTCTCCTTAAGAAACTCAGCTGCTTCTaGCGTGGGCAGAGTATGGTCAATAACTGTGTTGTC +
Preference number: 6 (lower is better)
Translates to: RQFTLLKKLSCF*RGQSMVNNCVV
Trigger: GACAACACAGTTATTGACCATACTCTGCCCACGCCAGAAGCAGCTGAGTTTCTTAAGGAGAGTGAACTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CCA 72 bp GTAATGAGCATAAACAGCAGTCCTCCTCTAGGGCATTaGCTGAACACCGAGAACACATCCAGTCTTCAGAAG +
Preference number: 6 (lower is better)
Translates to: VMSINSSPPLGH*LNTENTSSLQK
Trigger: CTTCTGAAGACTGGATGTGTTCTCGGTGTTCAGCCAATGCCCTAGAGGAGGACTGCTGTTTATGCTCATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372396.4
ENST00000481296.1
CDS CCA 72 bp TTAAGAAACTCAGCTGCTTCTGGCGTGGGCAGAGTATaGTCAATAACTGTGTTGTCCTTCCCAGCTTTCCAA +
Preference number: 6 (lower is better)
Translates to: LRNSAASGVGRV*SITVLSFPAFQ
Trigger: TTGGAAAGCTGGGAAGGACAACACAGTTATTGACCATACTCTGCCCACGCCAGAAGCAGCTGAGTTTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 72 bp GCTTCTGGCGTGGGCAGAGTATGGTCAATAACTGTGTaGTCCTTCCCAGCTTTCCAAAGTTTGTACCTTTCT +
Preference number: 6 (lower is better)
Translates to: ASGVGRVWSITV*SFPAFQSLYLS
Trigger: AGAAAGGTACAAACTTTGGAAAGCTGGGAAGGACAACACAGTTATTGACCATACTCTGCCCACGCCAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 72 bp AAGATACATTTCAGTTTGAAGCGGGGCAGGGGGATTTaGCTCACATCCACCGGACTTCTTTCTGCAATGTTG +
Preference number: 6 (lower is better)
Translates to: KIHFSLKRGRGI*LTSTGLLSAML
Trigger: CAACATTGCAGAAAGAAGTCCGGTGGATGTGAGCAAAATCCCCCTGCCCCGCTTCAAACTGAAATGTATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS TCA 72 bp TCTCATCGGAATGATAAAGAGGATGCATCACCAATGTaGCCTCTGAGGATCCTTATAGCTCCGCACCAATTC +
Preference number: 6 (lower is better)
Translates to: SHRNDKEDASPM*PLRILIAPHQF
Trigger: GAATTGGTGCGGAGCTATAAGGATCCTCAGAGGTCACATTGGTGATGCATCCTCTTTATCATTCCGATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472265.1
CDS CCA 72 bp GTGGCGGAGAAATGCCTCACAGCTTTGAGCACTTCCTaGGAAAAAGCCTATTTAATTGAAAGGGTACAGGTT +
Preference number: 6 (lower is better)
Translates to: VAEKCLTALSTS*EKAYLIERVQV
Trigger: AACCTGTACCCTTTCAATTAAATAGGCTTTTTCCCAGGAAGTGCTCAAAGCTGTGAGGCATTTCTCCGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472265.1
CDS CAA 90 bp TTCTTACAGAAGATACATTTCAGTTTGAAGCGGGGCAGGGGGATTTaGCTCACATCCACCGGACTTCTTTCTGCAATGTTGACAAACCTT +
Preference number: 6 (lower is better)
Translates to: FLQKIHFSLKRGRGI*LTSTGLLSAMLTNL
Trigger: AAGGTTTGTCAACATTGCAGAAAGAAGTCCGGTGGATGTGAGCAAAATCCCCCTGCCCCGCTTCAAACTGAAATGTATCTTCTGTAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS CAA 72 bp ATTTTGCTCACATCCACCGGACTTCTTTCTGCAATGTaGACAAACCTTGCTTCCAGAATTGCCACAGCACAT +
Preference number: 6 (lower is better)
Translates to: ILLTSTGLLSAM*TNLASRIATAH
Trigger: ATGTGCTGTGGCAATTCTGGAAGCAAGGTTTGTCAACATTGCAGAAAGAAGTCCGGTGGATGTGAGCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372396.4
CDS TCA 72 bp CAGTGTGTATACATCATCTCTCTTAACCACAAGTTGTaGGCCATCCTCAAACTCCACCTGGTACATTTGGAT +
Preference number: 6 (lower is better)
Translates to: QCVYIISLNHKL*AILKLHLVHLD
Trigger: ATCCAAATGTACCAGGTGGAGTTTGAGGATGGCTCACAACTTGTGGTTAAGAGAGATGATGTATACACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372396.4