RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KDM3B (Homo sapiens)

Ensembl gene IDs: ENSG00000120733

Ensembl transcript IDs: ENST00000314358.10, ENST00000504095.1, ENST00000505756.1, ENST00000507996.5, ENST00000508386.1, ENST00000510866.5, ENST00000512928.1, ENST00000542866.2

Found 1055 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCCCCACAGTTGGCCTCTCCTCTGTGGGGCTAGAGGAGAGAGTTaGCATCTCAATGGGCTGAGTGAGGCTGCTGGTGGGCGAGCTGGA +
Preference number: 1 (lower is better)
Translates to: RPHSWPLLCGARGES*HLNGLSEAAGGRAG
Trigger: TCCAGCTCGCCCACCAGCAGCCTCACTCAGCCCATTGAGATGCCAACTCTCTCCTCTAGCCCCACAGAGGAGAGGCCAACTGTGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR TCA 90 bp AGTGCAGGGCGGAGGAGGGTGGGGCCGTGTCAGGGCAAGGAGGCCTaGTGGCTTTCAGTTCACTATTGCTATTTGATGCCGAACTGTCTG +
Preference number: 1 (lower is better)
Translates to: SAGRRRVGPCQGKEA*WLSVHYCYLMPNCL
Trigger: CAGACAGTTCGGCATCAAATAGCAATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTGACACGGCCCCACCCTCCTCCGCCCTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR TCA 90 bp AACTTCCGGTACCGCTCCAGGCGGCATTCACGACACTTGTGCAGATaGGGTGCCACATTGATGCATGACCCATCCTGCAGGAAGGGCTCT +
Preference number: 1 (lower is better)
Translates to: NFRYRSRRHSRHLCR*GATLMHDPSCRKGS
Trigger: AGAGCCCTTCCTGCAGGATGGGTCATGCATCAATGTGGCACCTCATCTGCACAAGTGTCGTGAATGCCGCCTGGAGCGGTACCGGAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR GCA 90 bp CCACACTGGCTCTGGGTGAAGGGCCTCTGCTCCAGCAAAGAGCCCTaGCGTTCCCTGTTAAGTGTTGTGAGTGAAAGACCTGCTTCACAG +
Preference number: 1 (lower is better)
Translates to: PHWLWVKGLCSSKEP*RSLLSVVSERPASQ
Trigger: CTGTGAAGCAGGTCTTTCACTCACAACACTTAACAGGGAACGGCAGGGCTCTTTGCTGGAGCAGAGGCCCTTCACCCAGAGCCAGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
3UTR CCA 90 bp GGTTCTCCCTGGGTCTTGCAAGACTCCAGTGTTCACAGGAGAGTGTaGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTTTGTCAGAG +
Preference number: 1 (lower is better)
Translates to: GSPWVLQDSSVHRRV*GIASPRLLGWALSE
Trigger: CTCTGACAAAGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACTGGAGTCTTGCAAGACCCAGGGAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR CCA 90 bp CTCTGCAGGCACTTTCCGGTCCACAGAGCTGCCAGCCTTAGAGCCTaGCTTAGTGTCTGTTCCAAGAACGGATCTGCCTTTACACAGGCC +
Preference number: 1 (lower is better)
Translates to: LCRHFPVHRAASLRA*LSVCSKNGSAFTQA
Trigger: GGCCTGTGTAAAGGCAGATCCGTTCTTGGAACAGACACTAAGCCAGGCTCTAAGGCTGGCAGCTCTGTGGACCGGAAAGTGCCTGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CCA 90 bp AGAGGCTCTTCAGATCTGATGTCAGTGCTGTCGGCTTTGGGAACATaGTCCGGCTCTGGAGTTGTTACTGGTGCCGGTCCTCCTCCACCA +
Preference number: 1 (lower is better)
Translates to: RGSSDLMSVLSALGT*SGSGVVTGAGPPPP
Trigger: TGGTGGAGGAGGACCGGCACCAGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAGATCTGAAGAGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR TCA 90 bp CAGGCCTGTCTTAGCCTGCAGCTGCTCCTCAGAGTCACTCAAATCTaGCAGGTCACTGTTGGTGCTGGAGTCCGAGTCTTGTCTGCAAGC +
Preference number: 1 (lower is better)
Translates to: QACLSLQLLLRVTQI*QVTVGAGVRVLSAS
Trigger: GCTTGCAGACAAGACTCGGACTCCAGCACCAACAGTGACCTGTCAGATTTGAGTGACTCTGAGGAGCAGCTGCAGGCTAAGACAGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR TCA 90 bp GCTCCAGGCGGCATTCACGACACTTGTGCAGATGAGGTGCCACATTaGTGCATGACCCATCCTGCAGGAAGGGCTCTCCAGATTGCTTCA +
Preference number: 1 (lower is better)
Translates to: APGGIHDTCADEVPH*CMTHPAGRALQIAS
Trigger: TGAAGCAATCTGGAGAGCCCTTCCTGCAGGATGGGTCATGCATCAATGTGGCACCTCATCTGCACAAGTGTCGTGAATGCCGCCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR GCA 90 bp GCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTGGTaGCGGTCCTCCTCCACCAGAGAAGGTAGTTTCGTTTCCAGAAGA +
Preference number: 1 (lower is better)
Translates to: AVGFGNMVRLWSCYW*RSSSTREGSFVSRR
Trigger: TCTTCTGGAAACGAAACTACCTTCTCTGGTGGAGGAGGACCGGCACCAGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 90 bp GTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATaGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCA +
Preference number: 1 (lower is better)
Translates to: VHRRVWGIASPRLLG*ALSEVTCRDAIRLP
Trigger: TGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR CCA 90 bp AGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTaGTGCCGGTCCTCCTCCACCAGAGAAGGTAGTTTCGTTTCCAGA +
Preference number: 1 (lower is better)
Translates to: SAVGFGNMVRLWSCY*CRSSSTREGSFVSR
Trigger: TCTGGAAACGAAACTACCTTCTCTGGTGGAGGAGGACCGGCACCAGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR TCA 90 bp AAGAGGGGTTTCTTCTTTGCTAAAGATGCCGAATCTGCAGAGGAGTaGGACTCGGGCCAGCTGGGTGCCACCTTGGAGGTGACAGTGGTA +
Preference number: 1 (lower is better)
Translates to: KRGFFFAKDAESAEE*DSGQLGATLEVTVV
Trigger: TACCACTGTCACCTCCAAGGTGGCACCCAGCTGGCCCGAGTCTCACTCCTCTGCAGATTCGGCATCTTTAGCAAAGAAGAAACCCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR TCA 90 bp CGGAGAGACCTTTGCAGTGGAGTTGAACGAGTCCAGCCCAAAGGGTaGATGAGACTCTTTATTGAGCACCGACCTCAGGGACCCTGCTTC +
Preference number: 1 (lower is better)
Translates to: RRDLCSGVERVQPKG*MRLFIEHRPQGPCF
Trigger: GAAGCAGGGTCCCTGAGGTCGGTGCTCAATAAAGAGTCTCATTCACCCTTTGGGCTGGACTCGTTCAACTCCACTGCAAAGGTCTCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR GCA 90 bp GCAGCTGCTCCTCAGAGTCACTCAAATCTGACAGGTCACTGTTGGTaGTGGAGTCCGAGTCTTGTCTGCAAGCCAAGCTTCGTTCATCCA +
Preference number: 1 (lower is better)
Translates to: AAAPQSHSNLTGHCW*WSPSLVCKPSFVHP
Trigger: TGGATGAACGAAGCTTGGCTTGCAGACAAGACTCGGACTCCAGCACCAACAGTGACCTGTCAGATTTGAGTGACTCTGAGGAGCAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR GCA 90 bp ATCAGGTGCTCTGGAATTCCCTTCAGGCCTGTCTTAGCCTGCAGCTaGTCCTCAGAGTCACTCAAATCTGACAGGTCACTGTTGGTGCTG +
Preference number: 1 (lower is better)
Translates to: IRCSGIPFRPVLACS*SSESLKSDRSLLVL
Trigger: CAGCACCAACAGTGACCTGTCAGATTTGAGTGACTCTGAGGAGCAGCTGCAGGCTAAGACAGGCCTGAAGGGAATTCCAGAGCACCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR GCA 90 bp TTCCCCATCAGGTGCTCTGGAATTCCCTTCAGGCCTGTCTTAGCCTaGAGCTGCTCCTCAGAGTCACTCAAATCTGACAGGTCACTGTTG +
Preference number: 1 (lower is better)
Translates to: FPIRCSGIPFRPVLA*SCSSESLKSDRSLL
Trigger: CAACAGTGACCTGTCAGATTTGAGTGACTCTGAGGAGCAGCTGCAGGCTAAGACAGGCCTGAAGGGAATTCCAGAGCACCTGATGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CCA 90 bp GCTGCTCCTCAGAGTCACTCAAATCTGACAGGTCACTGTTGGTGCTaGAGTCCGAGTCTTGTCTGCAAGCCAAGCTTCGTTCATCCAGTG +
Preference number: 1 (lower is better)
Translates to: AAPQSHSNLTGHCWC*SPSLVCKPSFVHPV
Trigger: CACTGGATGAACGAAGCTTGGCTTGCAGACAAGACTCGGACTCCAGCACCAACAGTGACCTGTCAGATTTGAGTGACTCTGAGGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR TCA 90 bp CTGCTCCAGCAAAGAGCCCTGCCGTTCCCTGTTAAGTGTTGTGAGTaGAAGACCTGCTTCACAGAGGAGCTTGGAGTTTCTCCATGCCTA +
Preference number: 1 (lower is better)
Translates to: LLQQRALPFPVKCCE*KTCFTEELGVSPCL
Trigger: TAGGCATGGAGAAACTCCAAGCTCCTCTGTGAAGCAGGTCTTTCACTCACAACACTTAACAGGGAACGGCAGGGCTCTTTGCTGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR GCA 90 bp ACCTGCTTCACAGAGGAGCTTGGAGTTTCTCCATGCCTAGGACCTTaGCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTT +
Preference number: 1 (lower is better)
Translates to: TCFTEELGVSPCLGP*QFGFMSLEGANRIF
Trigger: AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAGGCATGGAGAAACTCCAAGCTCCTCTGTGAAGCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 90 bp TGTGGCTCCACCATCATCATGGCCTCCTTCTCAGACATTACGAGCTaGCAGAACTGGTCCCCAACATTGGCCAGGATGTATTTTGAGGTC +
Preference number: 1 (lower is better)
Translates to: CGSTIIMASFSDITS*QNWSPTLARMYFEV
Trigger: GACCTCAAAATACATCCTGGCCAATGTTGGGGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCATGATGATGGTGGAGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 90 bp GTTGTTGGAGGCAGTGGGACCCAGCAACAGACTGTTAAAAAGCTTTaGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACGAGTCCAG +
Preference number: 1 (lower is better)
Translates to: VVGGSGTQQQTVKKL*SQRRDLCSGVERVQ
Trigger: CTGGACTCGTTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR TCA 90 bp GGGTGCCACCTTGGAGGTGACAGTGGTAGCAGAAGAGGAGCTACCTaGTGCCTGAGATGCAAAACTACTGAAAGGGCTGTGTTCAACTTT +
Preference number: 1 (lower is better)
Translates to: GCHLGGDSGSRRGAT*CLRCKTTERAVFNF
Trigger: AAAGTTGAACACAGCCCTTTCAGTAGTTTTGCATCTCAGGCATCAGGTAGCTCCTCTTCTGCTACCACTGTCACCTCCAAGGTGGCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR GCA 90 bp ATAGCTTCACCCCGTCTCCTGGGATGGGCTTTGTCAGAGGTCACGTaGAGAGACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTA +
Preference number: 1 (lower is better)
Translates to: IASPRLLGWALSEVT*RDAIRLPPGMFKQL
Trigger: TAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCATCCCAGGAGACGGGGTGAAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR CCA 90 bp TTCCAGTGTTTTTCCTGCCTCTTTGTTTTCGGCTCCACCCACCTCTaGGGCCAAAGGTGTCTGACCTGTGGCTGTAGAATATGGAGTGAA +
Preference number: 1 (lower is better)
Translates to: FQCFSCLFVFGSTHL*GQRCLTCGCRIWSE
Trigger: TTCACTCCATATTCTACAGCCACAGGTCAGACACCTTTGGCCCCAGAGGTGGGTGGAGCCGAAAACAAAGAGGCAGGAAAAACACTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR GCA 90 bp AGAACACCATTGGACTGGCTCCTTCCACTTCCAAAAGTCAAAGGTTaGGATGAACTAGGGAGAGGTGCTCCAAATCCAGAAGAGGCCAGA +
Preference number: 1 (lower is better)
Translates to: RTPLDWLLPLPKVKG*DELGRGAPNPEEAR
Trigger: TCTGGCCTCTTCTGGATTTGGAGCACCTCTCCCTAGTTCATCGCAACCTTTGACTTTTGGAAGTGGAAGGAGCCAGTCCAATGGTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR TCA 90 bp ACCATTGGACTGGCTCCTTCCACTTCCAAAAGTCAAAGGTTGCGATaGACTAGGGAGAGGTGCTCCAAATCCAGAAGAGGCCAGAATAGA +
Preference number: 1 (lower is better)
Translates to: TIGLAPSTSKSQRLR*TRERCSKSRRGQNR
Trigger: TCTATTCTGGCCTCTTCTGGATTTGGAGCACCTCTCCCTAGTTCATCGCAACCTTTGACTTTTGGAAGTGGAAGGAGCCAGTCCAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR TCA 90 bp ACCTTGGAGGTGACAGTGGTAGCAGAAGAGGAGCTACCTGATGCCTaGGATGCAAAACTACTGAAAGGGCTGTGTTCAACTTTCTCCACA +
Preference number: 1 (lower is better)
Translates to: TLEVTVVAEEELPDA*DAKLLKGLCSTFST
Trigger: TGTGGAGAAAGTTGAACACAGCCCTTTCAGTAGTTTTGCATCTCAGGCATCAGGTAGCTCCTCTTCTGCTACCACTGTCACCTCCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR GCA 90 bp TCAAATCTGACAGGTCACTGTTGGTGCTGGAGTCCGAGTCTTGTCTaGAAGCCAAGCTTCGTTCATCCAGTGAGAACCTTTTCACAGCTT +
Preference number: 1 (lower is better)
Translates to: SNLTGHCWCWSPSLV*KPSFVHPVRTFSQL
Trigger: AAGCTGTGAAAAGGTTCTCACTGGATGAACGAAGCTTGGCTTGCAGACAAGACTCGGACTCCAGCACCAACAGTGACCTGTCAGATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CCA 90 bp GAGAAGCCCAAAGGTTTGTTCTCTGTGGCTAGAACACCATTGGACTaGCTCCTTCCACTTCCAAAAGTCAAAGGTTGCGATGAACTAGGG +
Preference number: 1 (lower is better)
Translates to: EKPKGLFSVARTPLD*LLPLPKVKGCDELG
Trigger: CCCTAGTTCATCGCAACCTTTGACTTTTGGAAGTGGAAGGAGCCAGTCCAATGGTGTTCTAGCCACAGAGAACAAACCTTTGGGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CCA 90 bp CCTCCTTCTCAGACATTACGAGCTGGCAGAACTGGTCCCCAACATTaGCCAGGATGTATTTTGAGGTCTCTAGATCTATCCCTTCTGCTA +
Preference number: 1 (lower is better)
Translates to: PPSQTLRAGRTGPQH*PGCILRSLDLSLLL
Trigger: TAGCAGAAGGGATAGATCTAGAGACCTCAAAATACATCCTGGCCAATGTTGGGGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 90 bp ACCATCATCATGGCCTCCTTCTCAGACATTACGAGCTGGCAGAACTaGTCCCCAACATTGGCCAGGATGTATTTTGAGGTCTCTAGATCT +
Preference number: 1 (lower is better)
Translates to: TIIMASFSDITSWQN*SPTLARMYFEVSRS
Trigger: AGATCTAGAGACCTCAAAATACATCCTGGCCAATGTTGGGGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCATGATGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 90 bp CAGTTCCTGCAGTTCACCAAGTCTACATCCTGGTCTCCAAATTCCTaGCTAAAGGCTTCTGGCTTCCAGAGCTCAGACTTGAGCTTTTTA +
Preference number: 1 (lower is better)
Translates to: QFLQFTKSTSWSPNS*LKASGFQSSDLSFL
Trigger: TAAAAAGCTCAAGTCTGAGCTCTGGAAGCCAGAAGCCTTTAGCCAGGAATTTGGAGACCAGGATGTAGACTTGGTGAACTGCAGGAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 90 bp TCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAGTCTACATCCTaGTCTCCAAATTCCTGGCTAAAGGCTTCTGGCTTCCAGAGCTCA +
Preference number: 1 (lower is better)
Translates to: SEIIAQFLQFTKSTS*SPNSWLKASGFQSS
Trigger: TGAGCTCTGGAAGCCAGAAGCCTTTAGCCAGGAATTTGGAGACCAGGATGTAGACTTGGTGAACTGCAGGAACTGTGCTATAATTTCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 90 bp CAAAAGAGAAGCCCAAAGGTTTGTTCTCTGTGGCTAGAACACCATTaGACTGGCTCCTTCCACTTCCAAAAGTCAAAGGTTGCGATGAAC +
Preference number: 1 (lower is better)
Translates to: QKRSPKVCSLWLEHH*TGSFHFQKSKVAMN
Trigger: GTTCATCGCAACCTTTGACTTTTGGAAGTGGAAGGAGCCAGTCCAATGGTGTTCTAGCCACAGAGAACAAACCTTTGGGCTTCTCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CCA 90 bp GAAGCATCTGAGGTTTTCTTATTTTCTACCACTGAGGCAATGATGTaGTCAAGAAAGTTGGGTAGGCTGGCCTTGCTCTTCACTCCTGCT +
Preference number: 1 (lower is better)
Translates to: EASEVFLFSTTEAMM*SRKLGRLALLFTPA
Trigger: AGCAGGAGTGAAGAGCAAGGCCAGCCTACCCAACTTTCTTGACCACATCATTGCCTCAGTGGTAGAAAATAAGAAAACCTCAGATGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR TCA 90 bp TGGGGAACACACCACAGCTTAGATGTGACAAAGTTCCTTCTCATATaGCTGTTCCCTCAAGGTAAGACTAAGATGGGAGGGGGAGAAAAA +
Preference number: 1 (lower is better)
Translates to: WGTHHSLDVTKFLLI*LFPQGKTKMGGGEK
Trigger: TTTTTCTCCCCCTCCCATCTTAGTCTTACCTTGAGGGAACAGTCATATGAGAAGGAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR TCA 90 bp GCTTTGAAGCATCTGAGGTTTTCTTATTTTCTACCACTGAGGCAATaGTGTGGTCAAGAAAGTTGGGTAGGCTGGCCTTGCTCTTCACTC +
Preference number: 1 (lower is better)
Translates to: ALKHLRFSYFLPLRQ*CGQESWVGWPCSSL
Trigger: GAGTGAAGAGCAAGGCCAGCCTACCCAACTTTCTTGACCACATCATTGCCTCAGTGGTAGAAAATAAGAAAACCTCAGATGCTTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 90 bp ATAGGTGAAAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATaGGGAACACACCACAGCTTAGATGTGACAAAGTTCCTTCTCATA +
Preference number: 1 (lower is better)
Translates to: IGENGSWSHQCCTHT*GTHHSLDVTKFLLI
Trigger: TATGAGAAGGAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTTTCACCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR TCA 90 bp GTACAGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATaGATCCCACCATTTTCAAATAAATCCTTAATCAGACTCCACTCA +
Preference number: 1 (lower is better)
Translates to: VQLERYTFSNVPMGQ*IPPFSNKSLIRLHS
Trigger: TGAGTGGAGTCTGATTAAGGATTTATTTGAAAATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACCAGGGCGGAGGAGGGTaGGGCCGTGTCAGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHQGGGG*GRVRAR
Trigger: CCTTGCCCTGACACGGCCCCACCCTCCTCCGCCCTG...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CAA 90 bp AGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTTaGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGC +
Preference number: 2 (lower is better)
Translates to: RRVWGIASPRLLGWA*SEVTCRDAIRLPPG
Trigger: GCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR CAA 90 bp GACAGAAAGCCGCCTGAGTGCCTGCCAAAGACGTTACTAAAGGTTTaGAGGAGGGGATTGTCCTGCTGCCCAGGCCCCACAGTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: DRKPPECLPKTLLKV*RRGLSCCPGPTVGL
Trigger: GAGGCCAACTGTGGGGCCTGGGCAGCAGGACAATCCCCTCCTCAAAACCTTTAGTAACGTCTTTGGCAGGCACTCAGGCGGCTTTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CAA 90 bp GGCGGTAGTGACCACAGCTGCGGAAGCCACTATGCCCTGGCCAACTaGTTCCAGTGTTTTTCCTGCCTCTTTGTTTTCGGCTCCACCCAC +
Preference number: 2 (lower is better)
Translates to: GGSDHSCGSHYALAN*FQCFSCLFVFGSTH
Trigger: GTGGGTGGAGCCGAAAACAAAGAGGCAGGAAAAACACTGGAACAAGTTGGCCAGGGCATAGTGGCTTCCGCAGCTGTGGTCACTACCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR GCA 90 bp CTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTTTCTCTCCCGAGGCCTaGGACCGGCTGCCTTTCTGT +
Preference number: 2 (lower is better)
Translates to: LMSVLSALGTWSGSGVVTFSPEA*DRLPFC
Trigger: ACAGAAAGGCAGCCGGTCGCAGGCCTCGGGAGAGAA...AGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR GCA 90 bp CTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTAGGAGGGGATTGTCCTaGTGCCCAGGCCCCACAGTT +
Preference number: 2 (lower is better)
Translates to: LMSVLSALGTWSGSGVVTRRGLS*CPGPTV
Trigger: AACTGTGGGGCCTGGGCAGCAGGACAATCCCCTCCT...AGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CCA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGCCCCGTCTCCTGGGATaGGCTTTGTCAGAGGTCACG +
Preference number: 2 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQPRLLG*ALSEVT
Trigger: CGTGACCTCTGACAAAGCCCATCCCAGGAGACGGGG...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR TCA 90 bp AGGCTGGCCTTGCTCTTCACTCCTGCTGAGGATGTAGAGAAGACCGGGGGAAAGGAGAGTTTGGAATACTaGCCACACTGGCTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: RLALLFTPAEDVEKTGGKESLEY*PHWLWV
Trigger: CACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTC...CTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGCAAGGCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR TCA 90 bp GCACCCTCCCCGATGGGAATCCCAACATACACCATCACATTAACAGCATCAGACGGACAGAAAGCCGCCTaGGTGCCTGCCAAAGACGTT +
Preference number: 2 (lower is better)
Translates to: APSPMGIPTYTITLTASDGQKAA*VPAKDV
Trigger: AACGTCTTTGGCAGGCACTCAGGCGGCTTTCTGTCC...GTCTGATGCTGTTAATGTGATGGTGTATGTTGGGATTCCCATCGGGGAGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR GCA 90 bp GAGGGTGGGGCCGTGTCAGGGCAAGGAGGCCTGATGGCTTTCAGTTCACTATTGTTGTCAGAGGTCACGTaGAGAGACGCTATCAGACTT +
Preference number: 2 (lower is better)
Translates to: EGGAVSGQGGLMAFSSLLLSEVT*RDAIRL
Trigger: AAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAA...CAATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTGACACGGCCCCACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CCA 90 bp GCACCCTCCCCGATGGGAATCCCAACATACACCATCACATTAACAGCATCAGACCTTCACCCCGTCTCCTaGGATGGGCTTTGTCAGAGG +
Preference number: 2 (lower is better)
Translates to: APSPMGIPTYTITLTASDLHPVS*DGLCQR
Trigger: CCTCTGACAAAGCCCATCCCAGGAGACGGGGTGAAG...GTCTGATGCTGTTAATGTGATGGTGTATGTTGGGATTCCCATCGGGGAGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CAA 90 bp TCTGTTTTCAGAGGCTCTTCAGATCTGATGTCAGTGCTGTCGGCTTaGGGAACATGGTCCGGCTCTGGAGTTGTTACTGGTGCCGGTCCT +
Preference number: 2 (lower is better)
Translates to: SVFRGSSDLMSVLSA*GTWSGSGVVTGAGP
Trigger: AGGACCGGCACCAGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAGATCTGAAGAGCCTCTGAAAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR TCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAGAATCTGCAGAGGAGTaGGACTCGGGCCAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: ISNQENVQESPAMFRQFGESAEE*DSGQLG
Trigger: ACCCAGCTGGCCCGAGTCTCACTCCTCTGCAGATTC...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR TCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAGTGTCCAAGGGGGTTTaGGGAAGTTTTCCCGGCCCG +
Preference number: 2 (lower is better)
Translates to: NQENVQESPAMFRQFGFPVSKGV*GSFPGP
Trigger: CGGGCCGGGAAAACTTCCTCAAACCCCCTTGGACAC...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR TCA 90 bp CTAGGACCTTGCCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTTGCTCTTCACTCCTGCTaGGGATGTAGAGAAGACCGG +
Preference number: 2 (lower is better)
Translates to: LGPCQFGFMSLEGANRIFALHSC*GCREDR
Trigger: CCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGC...AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR GCA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGTCCAGCAAAGAGCCCTaGCGTTCCCTGTTAAGTGTT +
Preference number: 2 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMSSKEP*RSLLSV
Trigger: AACACTTAACAGGGAACGGCAGGGCTCTTTGCTGGA...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR GCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTTTGTCAGAGGTCACGTaGAGAGACGCTATCAGACTT +
Preference number: 2 (lower is better)
Translates to: SVHRRVWGIASPRLLGWALSEVT*RDAIRL
Trigger: AAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAA...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR GCA 90 bp GCACCCTCCCCGATGGGAATCCCAACATACACCATCACATTAACAGCATCAGACCTGCGGAAGCCACTATaGCCTGGCCAACTTGTTCCA +
Preference number: 2 (lower is better)
Translates to: APSPMGIPTYTITLTASDLRKPL*PGQLVP
Trigger: TGGAACAAGTTGGCCAGGGCATAGTGGCTTCCGCAG...GTCTGATGCTGTTAATGTGATGGTGTATGTTGGGATTCCCATCGGGGAGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CCA 90 bp CTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTCACAGGATAGGGATGTaGCACTCTTGGCTTGGAGTC +
Preference number: 2 (lower is better)
Translates to: LMSVLSALGTWSGSGVVTHRIGM*HSWLGV
Trigger: GACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG...AGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTCCGAGGCCGGCCCTTaGGGGCCTGCTTCCCTTTGC +
Preference number: 2 (lower is better)
Translates to: SWRDIHFPMYLWANESHHSEAGP*GPASLC
Trigger: GCAAAGGGAAGCAGGCCCCCAAGGGCCGGCCTCGGA...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CCA 90 bp CTAGGACCTTGCCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTTGAGCACCCTCCCCGATaGGAATCCCAACATACACCA +
Preference number: 2 (lower is better)
Translates to: LGPCQFGFMSLEGANRIFEHPPR*ESQHTP
Trigger: TGGTGTATGTTGGGATTCCCATCGGGGAGGGTGCTC...AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR TCA 90 bp CTTCCCCATCAGGTGCTCTGGAATTCCCTTCAGGCCTGTCTTAGCCTGCAGCTGAGAAAGGTGTGCCCGTaGATCTCAAATCAGGAGAAT +
Preference number: 2 (lower is better)
Translates to: LPHQVLWNSLQACLSLQLRKVCP*ISNQEN
Trigger: ATTCTCCTGATTTGAGATTCACGGGCACACCTTTCT...CAGCTGCAGGCTAAGACAGGCCTGAAGGGAATTCCAGAGCACCTGATGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR TCA 90 bp TTGGTGCTGGAGTCCGAGTCTTGTCTGCAAGCCAAGCTTCGTTCATCCAGTGAGAGCTTTGTTCTCCTGTaGAAAATCTGCCGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: LVLESESCLQAKLRSSSESFVLL*KICRGG
Trigger: TCCTCCCCGGCAGATTTTTCACAGGAGAACAAAGCT...CTCACTGGATGAACGAAGCTTGGCTTGCAGACAAGACTCGGACTCCAGCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR TCA 90 bp ACAGAGGAGCTTGGAGTTTCTCCATGCCTAGGACCTTGCCAGTTTGGATTCATGTGCCACATTGATGCATaGCCCATCCTGCAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: TEELGVSPCLGPCQFGFMCHIDA*PILQEG
Trigger: CCCTTCCTGCAGGATGGGTCATGCATCAATGTGGCA...CATGAATCCAAACTGGCAAGGTCCTAGGCATGGAGAAACTCCAAGCTCCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR GCA 90 bp GCCATACTCCTCATAGAGTCGCTTACGGAGGGTCTGGTCCAGGTACCAACTTTGCAAATCAGGAGAATGTaGAGGAAAGCCCCGCCATGT +
Preference number: 2 (lower is better)
Translates to: AILLIESLTEGLVQVPTLQIRRM*RKAPPC
Trigger: ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTG...CAAAGTTGGTACCTGGACCAGACCCTCCGTAAGCGACTCTATGAGGAGTATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR GCA 90 bp AGGCTGGCCTTGCTCTTCACTCCTGCTGAGGATGTAGAGAAGACCGGGGGAAAGCCAAAAGTCAAAGGTTaGGATGAACTAGGGAGAGGT +
Preference number: 2 (lower is better)
Translates to: RLALLFTPAEDVEKTGGKPKVKG*DELGRG
Trigger: ACCTCTCCCTAGTTCATCGCAACCTTTGACTTTTGG...CTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGCAAGGCCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR GCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCACCGGGGGAAAGGGTATaGCTGTGTCCAAGGGGGTTT +
Preference number: 2 (lower is better)
Translates to: NQENVQESPAMFRQFGFPPGERV*LCPRGF
Trigger: AAACCCCCTTGGACACAGGCATACCCTTTCCCCCGG...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp CTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTGGGATGTGGCACTCTTaGCTTGGAGTCTCAAACTGT +
Preference number: 2 (lower is better)
Translates to: LMSVLSALGTWSGSGVVTGMWHS*LGVSNC
Trigger: ACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCC...AGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCCCCCGTCTCCTGGGATaGGCTTTGTCAGAGGTCACG +
Preference number: 2 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFPRLLG*ALSEVT
Trigger: CGTGACCTCTGACAAAGCCCATCCCAGGAGACGGGG...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGACTTCACCCCGTCTCCTaGGATGGGCTTTGTCAGAGG +
Preference number: 2 (lower is better)
Translates to: ISNQENVQESPAMFRQFGLHPVS*DGLCQR
Trigger: CCTCTGACAAAGCCCATCCCAGGAGACGGGGTGAAG...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp TTTCAGAGGCTCTTCAGATCTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCGCAGTGGGTTCTCCCTaGGTCTTGCAAGACTCCAGT +
Preference number: 2 (lower is better)
Translates to: FQRLFRSDVSAVGFGNMVAVGSP*VLQDSS
Trigger: ACTGGAGTCTTGCAAGACCCAGGGAGAACCCACTGC...GACCATGTTCCCAAAGCCGACAGCACTGACATCAGATCTGAAGAGCCTCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGTCCTGGGAAAAGCAGTaGGTTCTCCCTGGGTCTTGC +
Preference number: 2 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQSWEKQ*VLPGSC
Trigger: GCAAGACCCAGGGAGAACCCACTGCTTTTCCCAGGA...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp TGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTATTTCACTGCGCTCCCCATTaGGGCCCAGCTTCCCCATCA +
Preference number: 2 (lower is better)
Translates to: WVSVKLQARFEASEVFLFHCAPH*GPASPS
Trigger: TGATGGGGAAGCTGGGCCCCAATGGGGAGCGCAGTG...AAATAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCACTCTGGAGTTGTTACTaGTGCCGGTCCTCCTCCACC +
Preference number: 2 (lower is better)
Translates to: NQENVQESPAMFRQFGFPLWSCY*CRSSST
Trigger: GGTGGAGGAGGACCGGCACCAGTAACAACTCCAGAG...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACAACATGGTCCGGCTCTaGAGTTGTTACTGGTGCCGG +
Preference number: 2 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHNMVRL*SCYWCR
Trigger: CCGGCACCAGTAACAACTCCAGAGCCGGACCATGTT...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp CTAGGACCTTGCCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTTTCGGCTTTGGGAACATaGTCCGGCTCTGGAGTTGTT +
Preference number: 2 (lower is better)
Translates to: LGPCQFGFMSLEGANRIFSALGT*SGSGVV
Trigger: AACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGA...AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CAA 90 bp GGGGCCGTGTCAGGGCAAGGAGGCCTGATGGCTTTCAGTTCACTATaGCTATTTGATGCCGAACTGTCTGTTTTCAGAGGCTCTTCAGAT +
Preference number: 2 (lower is better)
Translates to: GAVSGQGGLMAFSSL*LFDAELSVFRGSSD
Trigger: ATCTGAAGAGCCTCTGAAAACAGACAGTTCGGCATCAAATAGCAATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTGACACGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR GCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTGGTAGTGACCACAGCTaGGGAAGCCACTATGCCCTG +
Preference number: 2 (lower is better)
Translates to: SNQENVQESPAMFRQFGFGSDHS*GSHYAL
Trigger: CAGGGCATAGTGGCTTCCGCAGCTGTGGTCACTACC...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR GCA 90 bp GAAATCCCGAACTTTCACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAAGGGGATTGTCCTGCTaGCCAGGCCCCACAGTTGGC +
Preference number: 2 (lower is better)
Translates to: EIPNFHIGNYSTVPAVHQRGLSC*PGPTVG
Trigger: GCCAACTGTGGGGCCTGGGCAGCAGGACAATCCCCT...TTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTGAAAGTTCGGGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR GCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACCAGCGGAGAGACCTTTaGAGTGGAGTTGAACGAGTC +
Preference number: 2 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHQRRDL*SGVERV
Trigger: GACTCGTTCAACTCCACTGCAAAGGTCTCTCCGCTG...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACCACAGGATAGGGATGTaGCACTCTTGGCTTGGAGTC +
Preference number: 2 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHHRIGM*HSWLGV
Trigger: GACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTCATGTTCAGGCAATTTaGATTTCCAAAAGGCCACAG +
Preference number: 2 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAHVQAI*ISKRPQ
Trigger: CTGTGGCCTTTTGGAAATCCAAATTGCCTGAACATG...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGGTTCACAGGAGAGTGTaGGGAATAGCTTCACCCCGT +
Preference number: 2 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQVHRRV*GIASPR
Trigger: ACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAAC...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp TTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCATTGGTGGATCCTCACTGTGTTTaGGGTGGAGCTGGCGGTAGT +
Preference number: 2 (lower is better)
Translates to: FPEEALGFMLGSCDIPLVDPHCV*GGAGGS
Trigger: ACTACCGCCAGCTCCACCCCAAACACAGTGAGGATC...CACCAATGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CCA 90 bp CACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAGTCTACATCCTGGTCCTCTGGAGTTGTTACTaGTGCCGGTCCTCCTCCACC +
Preference number: 2 (lower is better)
Translates to: HIGNYSTVPAVHQVYILVLWSCY*CRSSST
Trigger: GGTGGAGGAGGACCGGCACCAGTAACAACTCCAGAG...GACCAGGATGTAGACTTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CAA 90 bp GGGCCCCCACTGGTAAGAGCTGAGCCCAGAACACCAGATACTAGCTaGGAGGAGTCAGTTGTAATGAAGAGGGGTTTCTTCTTTGCTAAA +
Preference number: 2 (lower is better)
Translates to: GPPLVRAEPRTPDTS*EESVVMKRGFFFAK
Trigger: TTTAGCAAAGAAGAAACCCCTCTTCATTACAACTGACTCCTCCAAGCTAGTATCTGGTGTTCTGGGCTCAGCTCTTACCAGTGGGGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CAA 90 bp TTACGAGCTGGCAGAACTGGTCCCCAACATTGGCCAGGATGTATTTaGAGGTCTCTAGATCTATCCCTTCTGCTAGGGAGGAAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: LRAGRTGPQHWPGCI*RSLDLSLLLGRKRE
Trigger: TTCCCTCTTCCTCCCTAGCAGAAGGGATAGATCTAGAGACCTCAAAATACATCCTGGCCAATGTTGGGGACCAGTTCTGCCAGCTCGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CAA 90 bp GCCTCCTTCTCAGACATTACGAGCTGGCAGAACTGGTCCCCAACATaGGCCAGGATGTATTTTGAGGTCTCTAGATCTATCCCTTCTGCT +
Preference number: 2 (lower is better)
Translates to: ASFSDITSWQNWSPT*ARMYFEVSRSIPSA
Trigger: AGCAGAAGGGATAGATCTAGAGACCTCAAAATACATCCTGGCCAATGTTGGGGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR TCA 90 bp ACAGAAGCCTCCCATCACAAAGCCAGGAGTGAGAAGTATGGGGATCTAGCACATGTCAACCTTCAGTGTTaGGGCAGCGTAGAAGAGAGT +
Preference number: 2 (lower is better)
Translates to: TEASHHKARSEKYGDLAHVNLQC*GSVEES
Trigger: ACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGAC...ATGTGCTAGATCCCCATACTTCTCACTCCTGGCTTTGTGATGGGAGGCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR TCA 90 bp AGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACCCCACTGGTAAGAGCTaGGCCCAGAACACCAGATAC +
Preference number: 2 (lower is better)
Translates to: RLLKSFGVSGETFAVELNPTGKS*AQNTRY
Trigger: GTATCTGGTGTTCTGGGCTCAGCTCTTACCAGTGGG...GTTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR TCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTTTCCCGGCCCGGAGTaGAGGAGGTCTCGAAGGCTA +
Preference number: 2 (lower is better)
Translates to: SDFHQACLSNYPILVPVMFPGPE*RRSRRL
Trigger: TAGCCTTCGAGACCTCCTTCACTCCGGGCCGGGAAA...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR TCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAGGGCTCCAGCAGGTATaGAAACAGCATCACCTAGGA +
Preference number: 2 (lower is better)
Translates to: ISNQENVQESPAMFRQFGGLQQV*KQHHLG
Trigger: TCCTAGGTGATGCTGTTTTCATACCTGCTGGAGCCC...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR GCA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGTCCAGCAAAGAGCCCTaGCGTTCCCTGTTAAGTGTT +
Preference number: 2 (lower is better)
Translates to: STTFLCQPSVLRQRRREWSSKEP*RSLLSV
Trigger: AACACTTAACAGGGAACGGCAGGGCTCTTTGCTGGA...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR GCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTGGTGGGCATGGACTCTaGAGGCACTTTCCGGTCCAC +
Preference number: 2 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTIGGHGL*RHFPVH
Trigger: GTGGACCGGAAAGTGCCTGCAGAGTCCATGCCCACC...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR GCA 90 bp CACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAGTCTACATCCTGGTCGGGCCTGCTTCCCTTTaGTTTTGCCCAGCAACAGCT +
Preference number: 2 (lower is better)
Translates to: HIGNYSTVPAVHQVYILVGPASL*FCPATA
Trigger: AGCTGTTGCTGGGCAAAAGCAAAGGGAAGCAGGCCC...GACCAGGATGTAGACTTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CCA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGTAGAAGAGAGTGGCTaGAGAGTTTGGAATACTGAC +
Preference number: 2 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQVEESG*RVWNTD
Trigger: GTCAGTATTCCAAACTCTCCAGCCACTCTCTTCTAC...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp TTTCAGAGGCTCTTCAGATCTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCGGGATGTGGCACTCTTaGCTTGGAGTCTCAAACTGT +
Preference number: 2 (lower is better)
Translates to: FQRLFRSDVSAVGFGNMVGMWHS*LGVSNC
Trigger: ACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCC...GACCATGTTCCCAAAGCCGACAGCACTGACATCAGATCTGAAGAGCCTCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAGTTCACAGGAGAGTGTaGGGAATAGCTTCACCCCGT +
Preference number: 2 (lower is better)
Translates to: ISNQENVQESPAMFRQFGVHRRV*GIASPR
Trigger: ACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAAC...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAAATCCTGGAGCCTCCTaGGAAAAGCAGTGGGTTCTC +
Preference number: 2 (lower is better)
Translates to: ISNQENVQESPAMFRQFGNPGAS*EKQWVL
Trigger: GAGAACCCACTGCTTTTCCCAGGAGGCTCCAGGATT...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp CTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTGGTGAAAATGGTTCCTaGAGTCACCAGTGTTGTACA +
Preference number: 2 (lower is better)
Translates to: LMSVLSALGTWSGSGVVTGENGS*SHQCCT
Trigger: TGTACAACACTGGTGACTCCAGGAACCATTTTCACC...AGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CCA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGGTGAAAATGGTTCCTaGAGTCACCAGTGTTGTACA +
Preference number: 2 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQGENGS*SHQCCT
Trigger: TGTACAACACTGGTGACTCCAGGAACCATTTTCACC...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp ACAGAGGAGCTTGGAGTTTCTCCATGCCTAGGACCTTGCCAGTTTGGATTCATGGAAGCCACTATGCCCTaGCCAACTTGTTCCAGTGTT +
Preference number: 2 (lower is better)
Translates to: TEELGVSPCLGPCQFGFMEATMP*PTCSSV
Trigger: AACACTGGAACAAGTTGGCCAGGGCATAGTGGCTTC...CATGAATCCAAACTGGCAAGGTCCTAGGCATGGAGAAACTCCAAGCTCCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR TCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCGAGAGTTTGGAATACTaGCCACACTGGCTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTESLEY*PHWLWV
Trigger: CACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTC...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR TCA 90 bp CTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTAAGTTCCTTCTCATATaGCTGTTCCCTCAAGGTAAG +
Preference number: 2 (lower is better)
Translates to: LMSVLSALGTWSGSGVVTKFLLI*LFPQGK
Trigger: CTTACCTTGAGGGAACAGTCATATGAGAAGGAACTT...AGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR TCA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGTACCTATGGGCCAATaGATCCCACCATTTTCAAAT +
Preference number: 2 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQVPMGQ*IPPFSN
Trigger: ATTTGAAAATGGTGGGATTCATTGGCCCATAGGTAC...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR TCA 90 bp GAAATCCCGAACTTTCACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAGCCTTTACACAGGCCTaGGCTCAGGCTCTCAAGGCT +
Preference number: 2 (lower is better)
Translates to: EIPNFHIGNYSTVPAVHQAFTQA*AQALKA
Trigger: AGCCTTGAGAGCCTGAGCTCAGGCCTGTGTAAAGGC...TTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTGAAAGTTCGGGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR GCA 90 bp GGTTTTGTTGTTGGAGGCAGTGGGACCCAGCAACAGACTGTTAAAAAGCTTTGGTCCAGCAAAGAGCCCTaGCGTTCCCTGTTAAGTGTT +
Preference number: 2 (lower is better)
Translates to: GFVVGGSGTQQQTVKKLWSSKEP*RSLLSV
Trigger: AACACTTAACAGGGAACGGCAGGGCTCTTTGCTGGA...CCAAAGCTTTTTAACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR GCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTCCAAGAACGGATCTaGCTTTACACAGGCCTGAGC +
Preference number: 2 (lower is better)
Translates to: ISNQENVQESPAMFRQFGFQERI*LYTGLS
Trigger: GCTCAGGCCTGTGTAAAGGCAGATCCGTTCTTGGAA...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCCACAGGATAGGGATGTaGCACTCTTGGCTTGGAGTC +
Preference number: 2 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFHRIGM*HSWLGV
Trigger: GACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCAATCCTGGAGCCTCCTaGGAAAAGCAGTGGGTTCTC +
Preference number: 2 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFNPGAS*EKQWVL
Trigger: GAGAACCCACTGCTTTTCCCAGGAGGCTCCAGGATT...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp CTTGGCCTTGTTCTTCTCCAACCTTTCGGAGCAGCTCCCGGATCTTCTCTGCATCTTCTCGGGACAATTTaGGGGGCTGTAAAAATAGAT +
Preference number: 2 (lower is better)
Translates to: LGLVLLQPFGAAPGSSLHLLGTI*GAVKID
Trigger: ATCTATTTTTACAGCCCCCCAAATTGTCCCGAGAAG...ATGCAGAGAAGATCCGGGAGCTGCTCCGAAAGGTTGGAGAAGAACAAGGCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATCAGACATTACGAGCTaGCAGAACTGGTCCCCAACA +
Preference number: 2 (lower is better)
Translates to: ISNQENVQESPAMFRQFGSDITS*QNWSPT
Trigger: TGTTGGGGACCAGTTCTGCCAGCTCGTAATGTCTGA...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAGATTCTCTGGTTCGTaGGACTGTCCCTTTGCACAC +
Preference number: 2 (lower is better)
Translates to: NQENVQESPAMFRQFGFPRFSGS*DCPFAH
Trigger: GTGTGCAAAGGGACAGTCCCACGAACCAGAGAATCT...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CAA 90 bp GATCTGCCTTTACACAGGCCTGAGCTCAGGCTCTCAAGGCTTTGTTaGAATGAGTCCCGACTAGAAGAATCATCAGCCAAACTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: DLPLHRPELRLSRLC*NESRLEESSAKLSE
Trigger: TTCAGAGAGTTTGGCTGATGATTCTTCTAGTCGGGACTCATTCAAACAAAGCCTTGAGAGCCTGAGCTCAGGCCTGTGTAAAGGCAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR TCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCAGAGAGTTTGGAATACTaGCCACACTGGCTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSESLEY*PHWLWV
Trigger: CACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTC...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR TCA 90 bp GCACCCTCCCCGATGGGAATCCCAACATACACCATCACATTAACAGCATCAGACGAGATGCAAAACTACTaGAAGGGCTGTGTTCAACTT +
Preference number: 2 (lower is better)
Translates to: APSPMGIPTYTITLTASDEMQNY*KGCVQL
Trigger: AAGTTGAACACAGCCCTTTCAGTAGTTTTGCATCTC...GTCTGATGCTGTTAATGTGATGGTGTATGTTGGGATTCCCATCGGGGAGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR TCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGGCCAGTTTGGATTCATaGGCCTTGAGGGTGCCAACC +
Preference number: 2 (lower is better)
Translates to: SDFHQACLSNYPILVPVMASLDS*ALRVPT
Trigger: GGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGC...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR GCA 90 bp ATCTCGTTTGGTATATTCTGGCAGAGGAAGGTTCTCCATCAGATCTTCAAACCTCACAGCTCGCTTCCATaGCACTTTCTGGTGTGGCTC +
Preference number: 2 (lower is better)
Translates to: ISFGIFWQRKVLHQIFKPHSSLP*HFLVWL
Trigger: GAGCCACACCAGAAAGTGGCATGGAAGCGAGCTGTG...AGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAACGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR GCA 90 bp ATCTCGTTTGGTATATTCTGGCAGAGGAAGGTTCTCCATCAGATCTTCAAACCTTGGAGTTGTTACTGGTaGCGGTCCTCCTCCACCAGA +
Preference number: 2 (lower is better)
Translates to: ISFGIFWQRKVLHQIFKPWSCYW*RSSSTR
Trigger: TCTGGTGGAGGAGGACCGGCACCAGTAACAACTCCA...AGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAACGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp AGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACGTGGCACTCTTGGCTTaGAGTCTCAAACTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: RLLKSFGVSGETFAVELNVALLA*SLKLCV
Trigger: CACACACAGTTTGAGACTCCAAGCCAAGAGTGCCAC...GTTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTGTGGCACTCTTGGCTTaGAGTCTCAAACTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: SNQENVQESPAMFRQFGFVALLA*SLKLCV
Trigger: CACACACAGTTTGAGACTCCAAGCCAAGAGTGCCAC...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTGGGATGTGGCACTCTTaGCTTGGAGTCTCAAACTGT +
Preference number: 2 (lower is better)
Translates to: SNQENVQESPAMFRQFGFGMWHS*LGVSNC
Trigger: ACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCC...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGGCAGTGGGTTCTCCCTaGGTCTTGCAAGACTCCAGT +
Preference number: 2 (lower is better)
Translates to: SDFHQACLSNYPILVPVMAVGSP*VLQDSS
Trigger: ACTGGAGTCTTGCAAGACCCAGGGAGAACCCACTGC...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGGAGCACCCTCCCCGATaGGAATCCCAACATACACCA +
Preference number: 2 (lower is better)
Translates to: SDFHQACLSNYPILVPVMEHPPR*ESQHTP
Trigger: TGGTGTATGTTGGGATTCCCATCGGGGAGGGTGCTC...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CAA 90 bp CCAAAAGAGAAGCCCAAAGGTTTGTTCTCTGTGGCTAGAACACCATaGGACTGGCTCCTTCCACTTCCAAAAGTCAAAGGTTGCGATGAA +
Preference number: 2 (lower is better)
Translates to: PKEKPKGLFSVARTP*DWLLPLPKVKGCDE
Trigger: TTCATCGCAACCTTTGACTTTTGGAAGTGGAAGGAGCCAGTCCAATGGTGTTCTAGCCACAGAGAACAAACCTTTGGGCTTCTCTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CAA 90 bp GTTTTCTTATTTTCTACCACTGAGGCAATGATGTGGTCAAGAAAGTaGGGTAGGCTGGCCTTGCTCTTCACTCCTGCTGAGGATGTAGAG +
Preference number: 2 (lower is better)
Translates to: VFLFSTTEAMMWSRK*GRLALLFTPAEDVE
Trigger: CTCTACATCCTCAGCAGGAGTGAAGAGCAAGGCCAGCCTACCCAACTTTCTTGACCACATCATTGCCTCAGTGGTAGAAAATAAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR TCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTGAGAGTTTGGAATACTaGCCACACTGGCTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTIESLEY*PHWLWV
Trigger: CACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTC...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR TCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACGTACCTATGGGCCAATaGATCCCACCATTTTCAAAT +
Preference number: 2 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHVPMGQ*IPPFSN
Trigger: ATTTGAAAATGGTGGGATTCATTGGCCCATAGGTAC...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR TCA 90 bp ATCTCGTTTGGTATATTCTGGCAGAGGAAGGTTCTCCATCAGATCTTCAAACCTAGTCAAAGGTTGCGATaGACTAGGGAGAGGTGCTCC +
Preference number: 2 (lower is better)
Translates to: ISFGIFWQRKVLHQIFKPSQRLR*TRERCS
Trigger: GGAGCACCTCTCCCTAGTTCATCGCAACCTTTGACT...AGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAACGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR GCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGACAGGTCACTGTTGGTaGTGGAGTCCGAGTCTTGTC +
Preference number: 2 (lower is better)
Translates to: SDFHQACLSNYPILVPVMTGHCW*WSPSLV
Trigger: GACAAGACTCGGACTCCAGCACCAACAGTGACCTGT...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR GCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAGGGCTCTCCAGATTaGTTCAGCTTCTTCACTTTG +
Preference number: 2 (lower is better)
Translates to: NQENVQESPAMFRQFGFPKGSPD*FSFFTL
Trigger: CAAAGTGAAGAAGCTGAAGCAATCTGGAGAGCCCTT...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR GCA 90 bp ATCTCGTTTGGTATATTCTGGCAGAGGAAGGTTCTCCATCAGATCTTCAAACCTGCATCAGGGTCACTTTaGTGGGGGCTTAAAAACCCC +
Preference number: 2 (lower is better)
Translates to: ISFGIFWQRKVLHQIFKPASGSL*WGLKNP
Trigger: GGGGTTTTTAAGCCCCCAGCAAAGTGACCCTGATGC...AGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAACGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR GCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAGATACAAGGGCAGTTTaGTTTAATTCCCCACTTGCC +
Preference number: 2 (lower is better)
Translates to: ISNQENVQESPAMFRQFGDTRAV*FNSPLA
Trigger: GGCAAGTGGGGAATTAAAGCAAACTGCCCTTGTATC...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp GTTTCGTTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCAGTAGAAGAGAGTGGCTaGAGAGTTTGGAATACTGAC +
Preference number: 2 (lower is better)
Translates to: VSFPEEALGFMLGSCDIPVEESG*RVWNTD
Trigger: GTCAGTATTCCAAACTCTCCAGCCACTCTCTTCTAC...TGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAACGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAGTAGAAGAGAGTGGCTaGAGAGTTTGGAATACTGAC +
Preference number: 2 (lower is better)
Translates to: NQENVQESPAMFRQFGFPVEESG*RVWNTD
Trigger: GTCAGTATTCCAAACTCTCCAGCCACTCTCTTCTAC...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCCAGCGTAGAAGAGAGTaGCTGGAGAGTTTGGAATAC +
Preference number: 2 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTQRRRE*LESLEY
Trigger: GTATTCCAAACTCTCCAGCCACTCTCTTCTACGCTG...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp ATCTCGTTTGGTATATTCTGGCAGAGGAAGGTTCTCCATCAGATCTTCAAACCTCACAGGATAGGGATGTaGCACTCTTGGCTTGGAGTC +
Preference number: 2 (lower is better)
Translates to: ISFGIFWQRKVLHQIFKPHRIGM*HSWLGV
Trigger: GACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG...AGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAACGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp CACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAGTCTACATCCTGGTCACTGGTCCCCAACATTaGCCAGGATGTATTTTGAGG +
Preference number: 2 (lower is better)
Translates to: HIGNYSTVPAVHQVYILVTGPQH*PGCILR
Trigger: CCTCAAAATACATCCTGGCCAATGTTGGGGACCAGT...GACCAGGATGTAGACTTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp ATCTCGTTTGGTATATTCTGGCAGAGGAAGGTTCTCCATCAGATCTTCAAACCTGAAAGTTGGGTAGGCTaGCCTTGCTCTTCACTCCTG +
Preference number: 2 (lower is better)
Translates to: ISFGIFWQRKVLHQIFKPESWVG*PCSSLL
Trigger: CAGGAGTGAAGAGCAAGGCCAGCCTACCCAACTTTC...AGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAACGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAACCAAGTCTACATCCTaGTCTCCAAATTCCTGGCTA +
Preference number: 2 (lower is better)
Translates to: ISNQENVQESPAMFRQFGTKSTS*SPNSWL
Trigger: TAGCCAGGAATTTGGAGACCAGGATGTAGACTTGGT...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR TCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCTCAAACTGTGTGTGTaGACAGTACGACTTTCCTGT +
Preference number: 2 (lower is better)
Translates to: SNQENVQESPAMFRQFGFLKLCV*TVRLSC
Trigger: ACAGGAAAGTCGTACTGTTCACACACACAGTTTGAG...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR TCA 90 bp CACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAGTCTACATCCTGGTCCTCAAACTGTGTGTGTaGACAGTACGACTTTCCTGT +
Preference number: 2 (lower is better)
Translates to: HIGNYSTVPAVHQVYILVLKLCV*TVRLSC
Trigger: ACAGGAAAGTCGTACTGTTCACACACACAGTTTGAG...GACCAGGATGTAGACTTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR TCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCCTCAAACTGTGTGTGTaGACAGTACGACTTTCCTGT +
Preference number: 2 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTLKLCV*TVRLSC
Trigger: ACAGGAAAGTCGTACTGTTCACACACACAGTTTGAG...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR TCA 90 bp AGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACAGAAAGGTGTGCCCGTaGATCTCAAATCAGGAGAAT +
Preference number: 2 (lower is better)
Translates to: RLLKSFGVSGETFAVELNRKVCP*ISNQEN
Trigger: ATTCTCCTGATTTGAGATTCACGGGCACACCTTTCT...GTTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR TCA 90 bp GCCAGGATGTATTTTGAGGTCTCTAGATCTATCCCTTCTGCTAGGGAGGAAGAGCTTGTACCAGTTATGTaGTTTCCCCTATCTCCAAAC +
Preference number: 2 (lower is better)
Translates to: ARMYFEVSRSIPSAREEELVPVM*FPLSPN
Trigger: GTTTGGAGATAGGGGAAATCACATAACTGGTACAAG...CTCTTCCTCCCTAGCAGAAGGGATAGATCTAGAGACCTCAAAATACATCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR TCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAAAGTTCCTTCTCATATaGCTGTTCCCTCAAGGTAAG +
Preference number: 2 (lower is better)
Translates to: ISNQENVQESPAMFRQFGKFLLI*LFPQGK
Trigger: CTTACCTTGAGGGAACAGTCATATGAGAAGGAACTT...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR TCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAAACACTGGTAATAGGTaGAAATGGTTCCTGGAGTCA +
Preference number: 2 (lower is better)
Translates to: ISNQENVQESPAMFRQFGNTGNR*KWFLES
Trigger: TGACTCCAGGAACCATTTTCACCTATTACCAGTGTT...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR TCA 90 bp TTCTGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTACAGAATAGAATTTCTTaGATTCTCTCCCGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: FWVSVKLQARFEASEVFLQNRIS*ILSRGL
Trigger: CAGGCCTCGGGAGAGAATTCAAGAAATTCTATTCTG...TAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR TCA 90 bp GCCAGGATGTATTTTGAGGTCTCTAGATCTATCCCTTCTGCTAGGGAGGAAGAGAAGGCTTTGTTTGAATaGGTCCCGACTAGAAGAATC +
Preference number: 2 (lower is better)
Translates to: ARMYFEVSRSIPSAREEEKALFE*VPTRRI
Trigger: GATTCTTCTAGTCGGGACTCATTCAAACAAAGCCTT...CTCTTCCTCCCTAGCAGAAGGGATAGATCTAGAGACCTCAAAATACATCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR TCA 90 bp GAAATCCCGAACTTTCACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAACGACACTTGTGCAGATaGGGTGCCACATTGATGCAT +
Preference number: 2 (lower is better)
Translates to: EIPNFHIGNYSTVPAVHQRHLCR*GATLMH
Trigger: ATGCATCAATGTGGCACCTCATCTGCACAAGTGTCG...TTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTGAAAGTTCGGGATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR GCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTCCAGCAAAGAGCCCTaGCGTTCCCTGTTAAGTGTT +
Preference number: 2 (lower is better)
Translates to: SWRDIHFPMYLWANESHHSSKEP*RSLLSV
Trigger: AACACTTAACAGGGAACGGCAGGGCTCTTTGCTGGA...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR GCA 90 bp GCACCCTCCCCGATGGGAATCCCAACATACACCATCACATTAACAGCATCAGACACAGTAGAATCATCTTaGTCCTGTTCCTTAAACTTC +
Preference number: 2 (lower is better)
Translates to: APSPMGIPTYTITLTASDTVESS*SCSLNF
Trigger: GAAGTTTAAGGAACAGGAGCAAGATGATTCTACTGT...GTCTGATGCTGTTAATGTGATGGTGTATGTTGGGATTCCCATCGGGGAGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp CAGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAAGTAGAAGAGAGTGGCTaGAGAGTTTGGAATACTGAC +
Preference number: 2 (lower is better)
Translates to: QTVKKLWSQRRDLCSGVEVEESG*RVWNTD
Trigger: GTCAGTATTCCAAACTCTCCAGCCACTCTCTTCTAC...TTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp TGGGACTGTCCCTTTGCACACTTCAACCAGGAGAAAACTTCTTCATCACCCATCTGTGGCTGTAGAATATaGAGTGAAAGATGCAGGTGT +
Preference number: 2 (lower is better)
Translates to: WDCPFAHFNQEKTSSSPICGCRI*SERCRC
Trigger: ACACCTGCATCTTTCACTCCATATTCTACAGCCACA...GATGGGTGATGAAGAAGTTTTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR TCA 90 bp GCCAGGATGTATTTTGAGGTCTCTAGATCTATCCCTTCTGCTAGGGAGGAAGAGATCAGCCAAACTCTCTaGAACAGTAGTGAAGTAGTT +
Preference number: 2 (lower is better)
Translates to: ARMYFEVSRSIPSAREEEISQTL*NSSEVV
Trigger: AACTACTTCACTACTGTTTCAGAGAGTTTGGCTGAT...CTCTTCCTCCCTAGCAGAAGGGATAGATCTAGAGACCTCAAAATACATCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR TCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTAGAAGAGGAGCTACCTaGTGCCTGAGATGCAAAACT +
Preference number: 2 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTIRRGAT*CLRCKT
Trigger: AGTTTTGCATCTCAGGCATCAGGTAGCTCCTCTTCT...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR GCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTTGTCAGAGGTCACGTaGAGAGACGCTATCAGACTT +
Preference number: 2 (lower is better)
Translates to: SWRDIHFPMYLWANESHHLSEVT*RDAIRL
Trigger: AAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAA...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCCATGTTCAGGCAATTTaGATTTCCAAAAGGCCACAG +
Preference number: 2 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTHVQAI*ISKRPQ
Trigger: CTGTGGCCTTTTGGAAATCCAAATTGCCTGAACATG...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CCA 90 bp CTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGATTTGGCTAGAACACCATTaGACTGGCTCCTTCCACTTC +
Preference number: 2 (lower is better)
Translates to: LPPGMFKQLPHTCTSYVIWLEHH*TGSFHF
Trigger: GAAGTGGAAGGAGCCAGTCCAATGGTGTTCTAGCCA...AATCACATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CCA 90 bp ATCTCGTTTGGTATATTCTGGCAGAGGAAGGTTCTCCATCAGATCTTCAAACCTGCTCCACCATCATCATaGCCTCCTTCTCAGACATTA +
Preference number: 2 (lower is better)
Translates to: ISFGIFWQRKVLHQIFKPAPPSS*PPSQTL
Trigger: TAATGTCTGAGAAGGAGGCCATGATGATGGTGGAGC...AGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAACGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAGTGCTTTACATGTTCTaGAGATACAAAGTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: ISNQENVQESPAMFRQFGVLYMF*RYKVFC
Trigger: GCAGAAGACTTTGTATCTCCAGAACATGTAAAGCAC...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR TCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGCTCAAACTGTGTGTGTaGACAGTACGACTTTCCTGT +
Preference number: 2 (lower is better)
Translates to: SDFHQACLSNYPILVPVMLKLCV*TVRLSC
Trigger: ACAGGAAAGTCGTACTGTTCACACACACAGTTTGAG...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR TCA 90 bp GGTTTTGTTGTTGGAGGCAGTGGGACCCAGCAACAGACTGTTAAAAAGCTTTGGGTTTGGGACATGCATTaGAAAAACAAGTTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: GFVVGGSGTQQQTVKKLWVWDMH*KNKFLE
Trigger: CTCCAAAAACTTGTTTTTTCAATGCATGTCCCAAAC...CCAAAGCTTTTTAACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR GCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGGTCAGGCGGAAACAGTaGTTTACATGTTCTGGAGAT +
Preference number: 2 (lower is better)
Translates to: SDFHQACLSNYPILVPVMVRRKQ*FTCSGD
Trigger: ATCTCCAGAACATGTAAAGCACTGTTTCCGCCTGAC...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGTTGTACACACACATaGGGAACACACCACAGCTTA +
Preference number: 2 (lower is better)
Translates to: SDFHQACLSNYPILVPVMCCTHT*GTHHSL
Trigger: TAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACA...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR TCA 90 bp ATCTCGTTTGGTATATTCTGGCAGAGGAAGGTTCTCCATCAGATCTTCAAACCTCTTATTTTCTACCACTaGGGCAATGATGTGGTCAAG +
Preference number: 2 (lower is better)
Translates to: ISFGIFWQRKVLHQIFKPLIFYH*GNDVVK
Trigger: CTTGACCACATCATTGCCTCAGTGGTAGAAAATAAG...AGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAACGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATCATGTTCAGGCAATTTaGATTTCCAAAAGGCCACAG +
Preference number: 2 (lower is better)
Translates to: SWRDIHFPMYLWANESHHHVQAI*ISKRPQ
Trigger: CTGTGGCCTTTTGGAAATCCAAATTGCCTGAACATG...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR GCA 72 bp CAGTCCGAGGCCGGCCCTTGGGGGCCTGCTTCCCTTTaGTTTTGCCCAGCAACAGCTCAGCACTGCGCTCCC +
Preference number: 3 (lower is better)
Translates to: QSEAGPWGPASL*FCPATAQHCAP
Trigger: GGGAGCGCAGTGCTGAGCTGTTGCTGGGCAAAAGCAAAGGGAAGCAGGCCCCCAAGGGCCGGCCTCGGACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR GCA 72 bp CCGTGGGAAGGCTGGAGTGAGGGTGGGCATGGACTCTaGAGGCACTTTCCGGTCCACAGAGCTGCCAGCCTT +
Preference number: 3 (lower is better)
Translates to: PWEGWSEGGHGL*RHFPVHRAASL
Trigger: AAGGCTGGCAGCTCTGTGGACCGGAAAGTGCCTGCAGAGTCCATGCCCACCCTCACTCCAGCCTTCCCACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR GCA 72 bp CGAATCTGCAGAGGAGTGAGACTCGGGCCAGCTGGGTaGCACCTTGGAGGTGACAGTGGTAGCAGAAGAGGA +
Preference number: 3 (lower is better)
Translates to: RICRGVRLGPAG*HLGGDSGSRRG
Trigger: TCCTCTTCTGCTACCACTGTCACCTCCAAGGTGGCACCCAGCTGGCCCGAGTCTCACTCCTCTGCAGATTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CCA 72 bp AGTTGGCCTCTCCTCTGTGGGGCTAGAGGAGAGAGTTaGCATCTCAATGGGCTGAGTGAGGCTGCTGGTGGG +
Preference number: 3 (lower is better)
Translates to: SWPLLCGARGES*HLNGLSEAAGG
Trigger: CCCACCAGCAGCCTCACTCAGCCCATTGAGATGCCAACTCTCTCCTCTAGCCCCACAGAGGAGAGGCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CCA 72 bp GTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTaGAGTTGTTACTGGTGCCGGTCCTCCTCCACCAGA +
Preference number: 3 (lower is better)
Translates to: VSAVGFGNMVRL*SCYWCRSSSTR
Trigger: TCTGGTGGAGGAGGACCGGCACCAGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CAA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGGTCCGGCTCTGGAGTaGTTACTGGTGCCGGTCCTC +
Preference number: 3 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQGPALE*LLVPVL
Trigger: GAGGACCGGCACCAGTAACAACTCCAGAGCCGGACC...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR TCA 72 bp CAGCGTAGAAGAGAGTGGCTGGAGAGTTTGGAATACTaGCCACACTGGCTCTGGGTGAAGGGCCTCTGCTCC +
Preference number: 3 (lower is better)
Translates to: QRRREWLESLEY*PHWLWVKGLCS
Trigger: GGAGCAGAGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCTCTTCTACGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
3UTR TCA 72 bp TTTTTCTGGCACAGTCCCTGCTGCAAGGCCAGTGTCTaGGATCCTCACTGTGTTTGGGGTGGAGCTGGCGGT +
Preference number: 3 (lower is better)
Translates to: FFWHSPCCKASV*DPHCVWGGAGG
Trigger: ACCGCCAGCTCCACCCCAAACACAGTGAGGATCTCAGACACTGGCCTTGCAGCAGGGACTGTGCCAGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR TCA 72 bp TACCGCTCCAGGCGGCATTCACGACACTTGTGCAGATaGGGTGCCACATTGATGCATGACCCATCCTGCAGG +
Preference number: 3 (lower is better)
Translates to: YRSRRHSRHLCR*GATLMHDPSCR
Trigger: CCTGCAGGATGGGTCATGCATCAATGTGGCACCTCATCTGCACAAGTGTCGTGAATGCCGCCTGGAGCGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 72 bp AGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATaGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATC +
Preference number: 3 (lower is better)
Translates to: RVWGIASPRLLG*ALSEVTCRDAI
Trigger: GATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR CCA 72 bp TGGGTCTTGCAAGACTCCAGTGTTCACAGGAGAGTGTaGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCT +
Preference number: 3 (lower is better)
Translates to: WVLQDSSVHRRV*GIASPRLLGWA
Trigger: AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACTGGAGTCTTGCAAGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR CCA 72 bp TCCTGGAGCCTCCTGGGAAAAGCAGTGGGTTCTCCCTaGGTCTTGCAAGACTCCAGTGTTCACAGGAGAGTG +
Preference number: 3 (lower is better)
Translates to: SWSLLGKAVGSP*VLQDSSVHRRV
Trigger: CACTCTCCTGTGAACACTGGAGTCTTGCAAGACCCAGGGAGAACCCACTGCTTTTCCCAGGAGGCTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR CCA 72 bp GGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTaGTGCCGGTCCTCCTCCACCAGAGAAGGTAGTTTC +
Preference number: 3 (lower is better)
Translates to: GFGNMVRLWSCY*CRSSSTREGSF
Trigger: GAAACTACCTTCTCTGGTGGAGGAGGACCGGCACCAGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CAA 90 bp AGGCTGGCCTTGCTCTTCACTCCTGCTGAGGATGTAGAGAAGACCGGGGGAAAGAGGGATGTGGCACTCTaGGCTTGGAGTCTCAAACTG +
Preference number: 3 (lower is better)
Translates to: RLALLFTPAEDVEKTGGKRDVAL*AWSLKL
Trigger: CAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCT...CTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGCAAGGCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CAA 90 bp CTTGGCCTTGTTCTTCTCCAACCTTTCGGAGCAGCTCCCGGATCTTCTCTGCATCTCCTGGGATGGGCTTaGTCAGAGGTCACGTGCAGA +
Preference number: 3 (lower is better)
Translates to: LGLVLLQPFGAAPGSSLHLLGWA*SEVTCR
Trigger: TCTGCACGTGACCTCTGACAAAGCCCATCCCAGGAG...ATGCAGAGAAGATCCGGGAGCTGCTCCGAAAGGTTGGAGAAGAACAAGGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CAA 90 bp AGGCTGGCCTTGCTCTTCACTCCTGCTGAGGATGTAGAGAAGACCGGGGGAAAGGTGGCTAGAACACCATaGGACTGGCTCCTTCCACTT +
Preference number: 3 (lower is better)
Translates to: RLALLFTPAEDVEKTGGKVARTP*DWLLPL
Trigger: AAGTGGAAGGAGCCAGTCCAATGGTGTTCTAGCCAC...CTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGCAAGGCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR TCA 72 bp TTCTTCTTTGCTAAAGATGCCGAATCTGCAGAGGAGTaGGACTCGGGCCAGCTGGGTGCCACCTTGGAGGTG +
Preference number: 3 (lower is better)
Translates to: FFFAKDAESAEE*DSGQLGATLEV
Trigger: CACCTCCAAGGTGGCACCCAGCTGGCCCGAGTCTCACTCCTCTGCAGATTCGGCATCTTTAGCAAAGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR TCA 72 bp GGCATTCACGACACTTGTGCAGATGAGGTGCCACATTaGTGCATGACCCATCCTGCAGGAAGGGCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: GIHDTCADEVPH*CMTHPAGRALQ
Trigger: CTGGAGAGCCCTTCCTGCAGGATGGGTCATGCATCAATGTGGCACCTCATCTGCACAAGTGTCGTGAATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 72 bp TCAGATCTGATGTCAGTGCTGTCGGCTTTGGGAACATaGTCCGGCTCTGGAGTTGTTACTGGTGCCGGTCCT +
Preference number: 3 (lower is better)
Translates to: SDLMSVLSALGT*SGSGVVTGAGP
Trigger: AGGACCGGCACCAGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAGATCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CAA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGAGGGATGTGGCACTCTaGGCTTGGAGTCTCAAACTG +
Preference number: 3 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMRDVAL*AWSLKL
Trigger: CAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCT...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CAA 90 bp ACAGAAGCCTCCCATCACAAAGCCAGGAGTGAGAAGTATGGGGATCTAGCACATCAGCTGGGTGCCACCTaGGAGGTGACAGTGGTAGCA +
Preference number: 3 (lower is better)
Translates to: TEASHHKARSEKYGDLAHQLGAT*EVTVVA
Trigger: TGCTACCACTGTCACCTCCAAGGTGGCACCCAGCTG...ATGTGCTAGATCCCCATACTTCTCACTCCTGGCTTTGTGATGGGAGGCTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR TCA 72 bp GCAGTGGAGTTGAACGAGTCCAGCCCAAAGGGTGAATaGGACTCTTTATTGAGCACCGACCTCAGGGACCCT +
Preference number: 3 (lower is better)
Translates to: AVELNESSPKGE*DSLLSTDLRDP
Trigger: AGGGTCCCTGAGGTCGGTGCTCAATAAAGAGTCTCATTCACCCTTTGGGCTGGACTCGTTCAACTCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR GCA 72 bp AGGTGCTCTGGAATTCCCTTCAGGCCTGTCTTAGCCTaGAGCTGCTCCTCAGAGTCACTCAAATCTGACAGG +
Preference number: 3 (lower is better)
Translates to: RCSGIPFRPVLA*SCSSESLKSDR
Trigger: CCTGTCAGATTTGAGTGACTCTGAGGAGCAGCTGCAGGCTAAGACAGGCCTGAAGGGAATTCCAGAGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR GCA 72 bp TTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTGGTaGCGGTCCTCCTCCACCAGAGAAGGTAGTTTCGTT +
Preference number: 3 (lower is better)
Translates to: FGNMVRLWSCYW*RSSSTREGSFV
Trigger: AACGAAACTACCTTCTCTGGTGGAGGAGGACCGGCACCAGTAACAACTCCAGAGCCGGACCATGTTCCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 72 bp TGGGGCCAAAGGTGTCTGACCTGTGGCTGTAGAATATaGAGTGAAAGATGCAGGTGTGTCCCCACCTACAGG +
Preference number: 3 (lower is better)
Translates to: WGQRCLTCGCRI*SERCRCVPTYR
Trigger: CCTGTAGGTGGGGACACACCTGCATCTTTCACTCCATATTCTACAGCCACAGGTCAGACACCTTTGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CCA 72 bp CACTTTCCGGTCCACAGAGCTGCCAGCCTTAGAGCCTaGCTTAGTGTCTGTTCCAAGAACGGATCTGCCTTT +
Preference number: 3 (lower is better)
Translates to: HFPVHRAASLRA*LSVCSKNGSAF
Trigger: AAAGGCAGATCCGTTCTTGGAACAGACACTAAGCCAGGCTCTAAGGCTGGCAGCTCTGTGGACCGGAAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CAA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTAGGGATGTGGCACTCTaGGCTTGGAGTCTCAAACTG +
Preference number: 3 (lower is better)
Translates to: RCARESQIRRMCRKAPPCRDVAL*AWSLKL
Trigger: CAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCT...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CAA 90 bp GTGAAAAATCTGCCGGGGAGGACAGAAAGCCGCCTGAGTGCCTGCCAAAGACGTGAGAAGCCCAAAGGTTaGTTCTCTGTGGCTAGAACA +
Preference number: 3 (lower is better)
Translates to: VKNLPGRTESRLSACQRREKPKG*FSVART
Trigger: TGTTCTAGCCACAGAGAACAAACCTTTGGGCTTCTC...ACGTCTTTGGCAGGCACTCAGGCGGCTTTCTGTCCTCCCCGGCAGATTTTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR TCA 72 bp ACGACACTTGTGCAGATGAGGTGCCACATTGATGCATaGCCCATCCTGCAGGAAGGGCTCTCCAGATTGCTT +
Preference number: 3 (lower is better)
Translates to: TTLVQMRCHIDA*PILQEGLSRLL
Trigger: AAGCAATCTGGAGAGCCCTTCCTGCAGGATGGGTCATGCATCAATGTGGCACCTCATCTGCACAAGTGTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR TCA 72 bp GCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTaGACGAGTCCAGCCCAAAGGGTGAATGAGACTCTT +
Preference number: 3 (lower is better)
Translates to: ALESAERPLQWS*TSPAQRVNETL
Trigger: AAGAGTCTCATTCACCCTTTGGGCTGGACTCGTTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR GCA 72 bp AATTTCTTGAATTCTCTCCCGAGGCCTGCGACCGGCTaGCTTTCTGTTTTTCTGGCACAGTCCCTGCTGCAA +
Preference number: 3 (lower is better)
Translates to: NFLNSLPRPATG*LSVFLAQSLLQ
Trigger: TTGCAGCAGGGACTGTGCCAGAAAAACAGAAAGGCAGCCGGTCGCAGGCCTCGGGAGAGAATTCAAGAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR GCA 72 bp CCTCAGAGTCACTCAAATCTGACAGGTCACTGTTGGTaGTGGAGTCCGAGTCTTGTCTGCAAGCCAAGCTTC +
Preference number: 3 (lower is better)
Translates to: PQSHSNLTGHCW*WSPSLVCKPSF
Trigger: GAAGCTTGGCTTGCAGACAAGACTCGGACTCCAGCACCAACAGTGACCTGTCAGATTTGAGTGACTCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR GCA 72 bp TCTGGAATTCCCTTCAGGCCTGTCTTAGCCTGCAGCTaGTCCTCAGAGTCACTCAAATCTGACAGGTCACTG +
Preference number: 3 (lower is better)
Translates to: SGIPFRPVLACS*SSESLKSDRSL
Trigger: CAGTGACCTGTCAGATTTGAGTGACTCTGAGGAGCAGCTGCAGGCTAAGACAGGCCTGAAGGGAATTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR GCA 72 bp ACAGAGGAGCTTGGAGTTTCTCCATGCCTAGGACCTTaGCAGTTTGGATTCATGAGCCTTGAGGGTGCCAAC +
Preference number: 3 (lower is better)
Translates to: TEELGVSPCLGP*QFGFMSLEGAN
Trigger: GTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAGGCATGGAGAAACTCCAAGCTCCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 72 bp TTTTCCTGCCTCTTTGTTTTCGGCTCCACCCACCTCTaGGGCCAAAGGTGTCTGACCTGTGGCTGTAGAATA +
Preference number: 3 (lower is better)
Translates to: FSCLFVFGSTHL*GQRCLTCGCRI
Trigger: TATTCTACAGCCACAGGTCAGACACCTTTGGCCCCAGAGGTGGGTGGAGCCGAAAACAAAGAGGCAGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CAA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTCCATGTTCAGGCAATTaGGATTTCCAAAAGGCCACA +
Preference number: 3 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAPCSGN*DFQKAT
Trigger: TGTGGCCTTTTGGAAATCCAAATTGCCTGAACATGG...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CAA 90 bp GGTTTTGTTGTTGGAGGCAGTGGGACCCAGCAACAGACTGTTAAAAAGCTTTGGGCTTTAATTCCCCACTaGCCCCGGGCAGCATGTACC +
Preference number: 3 (lower is better)
Translates to: GFVVGGSGTQQQTVKKLWALIPH*PRAACT
Trigger: GGTACATGCTGCCCGGGGCAAGTGGGGAATTAAAGC...CCAAAGCTTTTTAACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACAAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CAA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGAGGGATGTGGCACTCTaGGCTTGGAGTCTCAAACTG +
Preference number: 3 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQRDVAL*AWSLKL
Trigger: CAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCT...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CAA 90 bp GTTTCGTTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCAGGTTCTCCCTGGGTCTaGCAAGACTCCAGTGTTCAC +
Preference number: 3 (lower is better)
Translates to: VSFPEEALGFMLGSCDIPGSPWV*QDSSVH
Trigger: GTGAACACTGGAGTCTTGCAAGACCCAGGGAGAACC...TGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAACGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CAA 90 bp GGTTTTGTTGTTGGAGGCAGTGGGACCCAGCAACAGACTGTTAAAAAGCTTTGGTCTGACAGGTCACTGTaGGTGCTGGAGTCCGAGTCT +
Preference number: 3 (lower is better)
Translates to: GFVVGGSGTQQQTVKKLWSDRSL*VLESES
Trigger: AGACTCGGACTCCAGCACCAACAGTGACCTGTCAGA...CCAAAGCTTTTTAACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CAA 90 bp CTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTAACTGGTCCCCAACATaGGCCAGGATGTATTTTGAG +
Preference number: 3 (lower is better)
Translates to: LMSVLSALGTWSGSGVVTNWSPT*ARMYFE
Trigger: CTCAAAATACATCCTGGCCAATGTTGGGGACCAGTT...AGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CAA 90 bp CTTGGCCTTGTTCTTCTCCAACCTTTCGGAGCAGCTCCCGGATCTTCTCTGCATAACTGGTCCCCAACATaGGCCAGGATGTATTTTGAG +
Preference number: 3 (lower is better)
Translates to: LGLVLLQPFGAAPGSSLHNWSPT*ARMYFE
Trigger: CTCAAAATACATCCTGGCCAATGTTGGGGACCAGTT...ATGCAGAGAAGATCCGGGAGCTGCTCCGAAAGGTTGGAGAAGAACAAGGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CAA 90 bp CTAGGACCTTGCCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTTACCCCAAATCCACATTaGCGACAAACCCAGTGGATG +
Preference number: 3 (lower is better)
Translates to: LGPCQFGFMSLEGANRIFTPNPH*RQTQWM
Trigger: CATCCACTGGGTTTGTCGCAAATGTGGATTTGGGGT...AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR TCA 72 bp CTGGCTCCTTCCACTTCCAAAAGTCAAAGGTTGCGATaGACTAGGGAGAGGTGCTCCAAATCCAGAAGAGGC +
Preference number: 3 (lower is better)
Translates to: LAPSTSKSQRLR*TRERCSKSRRG
Trigger: GCCTCTTCTGGATTTGGAGCACCTCTCCCTAGTTCATCGCAACCTTTGACTTTTGGAAGTGGAAGGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR TCA 72 bp CTTGGAGGTGACAGTGGTAGCAGAAGAGGAGCTACCTaGTGCCTGAGATGCAAAACTACTGAAAGGGCTGTG +
Preference number: 3 (lower is better)
Translates to: LGGDSGSRRGAT*CLRCKTTERAV
Trigger: CACAGCCCTTTCAGTAGTTTTGCATCTCAGGCATCAGGTAGCTCCTCTTCTGCTACCACTGTCACCTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR TCA 72 bp CTTTGCAGTGGAGTTGAACGAGTCCAGCCCAAAGGGTaGATGAGACTCTTTATTGAGCACCGACCTCAGGGA +
Preference number: 3 (lower is better)
Translates to: LCSGVERVQPKG*MRLFIEHRPQG
Trigger: TCCCTGAGGTCGGTGCTCAATAAAGAGTCTCATTCACCCTTTGGGCTGGACTCGTTCAACTCCACTGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR GCA 72 bp ACAGGTCACTGTTGGTGCTGGAGTCCGAGTCTTGTCTaGAAGCCAAGCTTCGTTCATCCAGTGAGAACCTTT +
Preference number: 3 (lower is better)
Translates to: TGHCWCWSPSLV*KPSFVHPVRTF
Trigger: AAAGGTTCTCACTGGATGAACGAAGCTTGGCTTGCAGACAAGACTCGGACTCCAGCACCAACAGTGACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CCA 72 bp CAGAGTCACTCAAATCTGACAGGTCACTGTTGGTGCTaGAGTCCGAGTCTTGTCTGCAAGCCAAGCTTCGTT +
Preference number: 3 (lower is better)
Translates to: QSHSNLTGHCWC*SPSLVCKPSFV
Trigger: AACGAAGCTTGGCTTGCAGACAAGACTCGGACTCCAGCACCAACAGTGACCTGTCAGATTTGAGTGACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CCA 72 bp ATGGCCTCCTTCTCAGACATTACGAGCTGGCAGAACTaGTCCCCAACATTGGCCAGGATGTATTTTGAGGTC +
Preference number: 3 (lower is better)
Translates to: MASFSDITSWQN*SPTLARMYFEV
Trigger: GACCTCAAAATACATCCTGGCCAATGTTGGGGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 72 bp ACCATCATCATGGCCTCCTTCTCAGACATTACGAGCTaGCAGAACTGGTCCCCAACATTGGCCAGGATGTAT +
Preference number: 3 (lower is better)
Translates to: TIIMASFSDITS*QNWSPTLARMY
Trigger: ATACATCCTGGCCAATGTTGGGGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCATGATGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 72 bp GGCAGTGGGACCCAGCAACAGACTGTTAAAAAGCTTTaGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAA +
Preference number: 3 (lower is better)
Translates to: GSGTQQQTVKKL*SQRRDLCSGVE
Trigger: TTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCTGTTGCTGGGTCCCACTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CAA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACTGTCAACCTTCAGTGTaGAGGCAGCGTAGAAGAGAG +
Preference number: 3 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHCQPSV*RQRRRE
Trigger: CTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACA...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CAA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCATGTGGCACTCTTGGCTaGGAGTCTCAAACTGTGTGT +
Preference number: 3 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPCGTLG*ESQTVC
Trigger: ACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACA...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CAA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTGCAATTACCCCATACTaGTACCAGTTATGTGATTTC +
Preference number: 3 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAAITPY*YQLCDF
Trigger: GAAATCACATAACTGGTACAAGTATGGGGTAATTGC...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CAA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCGGTTCTCCCTGGGTCTaGCAAGACTCCAGTGTTCAC +
Preference number: 3 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFGSPWV*QDSSVH
Trigger: GTGAACACTGGAGTCTTGCAAGACCCAGGGAGAACC...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CAA 90 bp GGTTTTGTTGTTGGAGGCAGTGGGACCCAGCAACAGACTGTTAAAAAGCTTTGGTGCTTCCCTTTGCTTTaGCCCAGCAACAGCTCAGCA +
Preference number: 3 (lower is better)
Translates to: GFVVGGSGTQQQTVKKLWCFPLL*PSNSSA
Trigger: TGCTGAGCTGTTGCTGGGCAAAAGCAAAGGGAAGCA...CCAAAGCTTTTTAACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR TCA 72 bp ACGAGTCCAGCCCAAAGGGTGAATGAGACTCTTTATTaGGCACCGACCTCAGGGACCCTGCTTCTTTTGTTT +
Preference number: 3 (lower is better)
Translates to: TSPAQRVNETLY*APTSGTLLLLF
Trigger: AAACAAAAGAAGCAGGGTCCCTGAGGTCGGTGCTCAATAAAGAGTCTCATTCACCCTTTGGGCTGGACTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR TCA 72 bp ATGCCTAGGACCTTGCCAGTTTGGATTCATGAGCCTTaGGGGTGCCAACCGCATCTTTCACTGCATGGTAAA +
Preference number: 3 (lower is better)
Translates to: MPRTLPVWIHEP*GCQPHLSLHGK
Trigger: TTTACCATGCAGTGAAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR GCA 72 bp AAGACCTGCTTCACAGAGGAGCTTGGAGTTTCTCCATaGCTAGGACCTTGCCAGTTTGGATTCATGAGCCTT +
Preference number: 3 (lower is better)
Translates to: KTCFTEELGVSP*LGPCQFGFMSL
Trigger: AAGGCTCATGAATCCAAACTGGCAAGGTCCTAGGCATGGAGAAACTCCAAGCTCCTCTGTGAAGCAGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 72 bp CGGAAGATCTTCCAATTGTTTTTGTTGCTGGGGTCATaGAGACACAGAAGCCTCCCATCACAAAGCCAGGAG +
Preference number: 3 (lower is better)
Translates to: RKIFQLFLLLGS*RHRSLPSQSQE
Trigger: CTCCTGGCTTTGTGATGGGAGGCTTCTGTGTCTCCATGACCCCAGCAACAAAAACAATTGGAAGATCTTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CAA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGGCTTTAATTCCCCACTaGCCCCGGGCAGCATGTACC +
Preference number: 3 (lower is better)
Translates to: SDFHQACLSNYPILVPVMALIPH*PRAACT
Trigger: GGTACATGCTGCCCGGGGCAAGTGGGGAATTAAAGC...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CAA 90 bp CTAGGACCTTGCCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTTCGGAAGATCTTCCAATaGTTTTTGTTGCTGGGGTCA +
Preference number: 3 (lower is better)
Translates to: LGPCQFGFMSLEGANRIFRKIFQ*FLLLGS
Trigger: TGACCCCAGCAACAAAAACAATTGGAAGATCTTCCG...AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR TCA 72 bp GTGACAGTGGTAGCAGAAGAGGAGCTACCTGATGCCTaGGATGCAAAACTACTGAAAGGGCTGTGTTCAACT +
Preference number: 3 (lower is better)
Translates to: VTVVAEEELPDA*DAKLLKGLCST
Trigger: AGTTGAACACAGCCCTTTCAGTAGTTTTGCATCTCAGGCATCAGGTAGCTCCTCTTCTGCTACCACTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR GCA 72 bp TTGGACTGGCTCCTTCCACTTCCAAAAGTCAAAGGTTaGGATGAACTAGGGAGAGGTGCTCCAAATCCAGAA +
Preference number: 3 (lower is better)
Translates to: LDWLLPLPKVKG*DELGRGAPNPE
Trigger: TTCTGGATTTGGAGCACCTCTCCCTAGTTCATCGCAACCTTTGACTTTTGGAAGTGGAAGGAGCCAGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CCA 72 bp GGCCAGATTGAGCCTGCCATCTCGTTTGGTATATTCTaGCAGAGGAAGGTTCTCCATCAGATCTTCAAACCT +
Preference number: 3 (lower is better)
Translates to: GQIEPAISFGIF*QRKVLHQIFKP
Trigger: AGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAACGAGATGGCAGGCTCAATCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CAA 90 bp TTCTGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTATGTCAACCTTCAGTGTaGAGGCAGCGTAGAAGAGAG +
Preference number: 3 (lower is better)
Translates to: FWVSVKLQARFEASEVFLCQPSV*RQRRRE
Trigger: CTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACA...TAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CAA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTTGTCAACCTTCAGTGTaGAGGCAGCGTAGAAGAGAG +
Preference number: 3 (lower is better)
Translates to: SNQENVQESPAMFRQFGFCQPSV*RQRRRE
Trigger: CTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACA...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CAA 90 bp TGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTATTTGTTTTTCCTGCCTCTTaGTTTTCGGCTCCACCCACC +
Preference number: 3 (lower is better)
Translates to: WVSVKLQARFEASEVFLFVFPAS*FSAPPT
Trigger: GGTGGGTGGAGCCGAAAACAAAGAGGCAGGAAAAAC...AAATAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CAA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCTATGCCCTGGCCAACTaGTTCCAGTGTTTTTCCTGC +
Preference number: 3 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFYALAN*FQCFSC
Trigger: GCAGGAAAAACACTGGAACAAGTTGGCCAGGGCATA...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CAA 90 bp ACAGAAGCCTCCCATCACAAAGCCAGGAGTGAGAAGTATGGGGATCTAGCACATCTCTCAAGGCTTTGTTaGAATGAGTCCCGACTAGAA +
Preference number: 3 (lower is better)
Translates to: TEASHHKARSEKYGDLAHLSRLC*NESRLE
Trigger: TTCTAGTCGGGACTCATTCAAACAAAGCCTTGAGAG...ATGTGCTAGATCCCCATACTTCTCACTCCTGGCTTTGTGATGGGAGGCTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CAA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCTTCAAAAGGAGCTTaGTTCTCCTGTGAAAAATCT +
Preference number: 3 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQASKGA*FSCEKS
Trigger: AGATTTTTCACAGGAGAACAAAGCTCCTTTTGAAGC...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CAA 90 bp TTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCATTGGTGCCATGTTCAGGCAATTaGGATTTCCAAAAGGCCACA +
Preference number: 3 (lower is better)
Translates to: FPEEALGFMLGSCDIPLVPCSGN*DFQKAT
Trigger: TGTGGCCTTTTGGAAATCCAAATTGCCTGAACATGG...CACCAATGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CAA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCATGGCCAGGATGTATTTaGAGGTCTCTAGATCTATCC +
Preference number: 3 (lower is better)
Translates to: NQENVQESPAMFRQFGFPWPGCI*RSLDLS
Trigger: GGATAGATCTAGAGACCTCAAAATACATCCTGGCCA...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR GCA 72 bp CCATCTCCTTCACTTCCTTCTGGGTATCAGTCAAGTTaGAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTAT +
Preference number: 3 (lower is better)
Translates to: PSPSLPSGYQSS*RPALKHLRFSY
Trigger: ATAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCAGAAGGAAGTGAAGGAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 72 bp AATGGTTCCTGGAGTCACCAGTGTTGTACACACACATaGGGAACACACCACAGCTTAGATGTGACAAAGTTC +
Preference number: 3 (lower is better)
Translates to: NGSWSHQCCTHT*GTHHSLDVTKF
Trigger: GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR TCA 72 bp CACCACAGCTTAGATGTGACAAAGTTCCTTCTCATATaGCTGTTCCCTCAAGGTAAGACTAAGATGGGAGGG +
Preference number: 3 (lower is better)
Translates to: HHSLDVTKFLLI*LFPQGKTKMGG
Trigger: CCCTCCCATCTTAGTCTTACCTTGAGGGAACAGTCATATGAGAAGGAACTTTGTCACATCTAAGCTGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR TCA 72 bp AAGAGGAGCTACCTGATGCCTGAGATGCAAAACTACTaGAAGGGCTGTGTTCAACTTTCTCCACAAATGCCA +
Preference number: 3 (lower is better)
Translates to: KRSYLMPEMQNY*KGCVQLSPQMP
Trigger: TGGCATTTGTGGAGAAAGTTGAACACAGCCCTTTCAGTAGTTTTGCATCTCAGGCATCAGGTAGCTCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR TCA 72 bp CGAGTCTTGTCTGCAAGCCAAGCTTCGTTCATCCAGTaGGAACCTTTTCACAGCTTCAAAAGGAGCTTTGTT +
Preference number: 3 (lower is better)
Translates to: RVLSASQASFIQ*EPFHSFKRSFV
Trigger: AACAAAGCTCCTTTTGAAGCTGTGAAAAGGTTCTCACTGGATGAACGAAGCTTGGCTTGCAGACAAGACTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CAA 90 bp CTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGATTTGTCAACCTTCAGTGTaGAGGCAGCGTAGAAGAGAG +
Preference number: 3 (lower is better)
Translates to: LPPGMFKQLPHTCTSYVICQPSV*RQRRRE
Trigger: CTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACA...AATCACATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CAA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAGCAATTACCCCATACTaGTACCAGTTATGTGATTTC +
Preference number: 3 (lower is better)
Translates to: ISNQENVQESPAMFRQFGAITPY*YQLCDF
Trigger: GAAATCACATAACTGGTACAAGTATGGGGTAATTGC...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CAA 90 bp GGTTTTGTTGTTGGAGGCAGTGGGACCCAGCAACAGACTGTTAAAAAGCTTTGGTCAGACTCCACTCAGTaGGAAAGTTTTGCTGAAAAT +
Preference number: 3 (lower is better)
Translates to: GFVVGGSGTQQQTVKKLWSDSTQ*ESFAEN
Trigger: ATTTTCAGCAAAACTTTCCAACTGAGTGGAGTCTGA...CCAAAGCTTTTTAACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CAA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATAGAGGGGTTTCTTCTTaGCTAAAGATGCCGAATCTG +
Preference number: 3 (lower is better)
Translates to: SWRDIHFPMYLWANESHHRGVSS*LKMPNL
Trigger: CAGATTCGGCATCTTTAGCAAAGAAGAAACCCCTCT...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR-3UTR CAA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATCCATGTTCAGGCAATTaGGATTTCCAAAAGGCCACA +
Preference number: 3 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYPCSGN*DFQKAT
Trigger: TGTGGCCTTTTGGAAATCCAAATTGCCTGAACATGG...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CAA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATAACTGTCCTTCCCATTaGGAAACATTAAGAGGAGTC +
Preference number: 3 (lower is better)
Translates to: SWRDIHFPMYLWANESHHNCPSH*ETLRGV
Trigger: GACTCCTCTTAATGTTTCCAAATGGGAAGGACAGTT...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR CCA 72 bp TTCCTGAGTCAGGCGGAAACAGTGCTTTACATGTTCTaGAGATACAAAGTCTTCTGCTACTTTTATGCAACT +
Preference number: 3 (lower is better)
Translates to: FLSQAETVLYMF*RYKVFCYFYAT
Trigger: AGTTGCATAAAAGTAGCAGAAGACTTTGTATCTCCAGAACATGTAAAGCACTGTTTCCGCCTGACTCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR-3UTR CAA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTCAGACTCCACTCAGTaGGAAAGTTTTGCTGAAAAT +
Preference number: 3 (lower is better)
Translates to: SWRDIHFPMYLWANESHHSDSTQ*ESFAEN
Trigger: ATTTTCAGCAAAACTTTCCAACTGAGTGGAGTCTGA...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR-3UTR CAA 90 bp ATCTCGTTTGGTATATTCTGGCAGAGGAAGGTTCTCCATCAGATCTTCAAACCTGTTCACTATTGCTATTaGATGCCGAACTGTCTGTTT +
Preference number: 3 (lower is better)
Translates to: ISFGIFWQRKVLHQIFKPVHYCY*MPNCLF
Trigger: AAACAGACAGTTCGGCATCAAATAGCAATAGTGAAC...AGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAACGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CCA 72 bp TACAGCTGGAGAGATATACATTTTCCAATGTACCTATaGGCCAATGAATCCCACCATTTTCAAATAAATCCT +
Preference number: 3 (lower is better)
Translates to: YSWRDIHFPMYL*ANESHHFQINP
Trigger: AGGATTTATTTGAAAATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR TCA 72 bp GAGAGATATACATTTTCCAATGTACCTATGGGCCAATaGATCCCACCATTTTCAAATAAATCCTTAATCAGA +
Preference number: 3 (lower is better)
Translates to: ERYTFSNVPMGQ*IPPFSNKSLIR
Trigger: TCTGATTAAGGATTTATTTGAAAATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR CAA 72 bp GCAGTCCGAGGCCGGCCCTTGGGGGCCTGCTTCCCTTaGCTTTTGCCCAGCAACAGCTCAGCACTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: AVRGRPLGACFP*LLPSNSSALRS
Trigger: GGAGCGCAGTGCTGAGCTGTTGCTGGGCAAAAGCAAAGGGAAGCAGGCCCCCAAGGGCCGGCCTCGGACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp GAAGGCTGGAGTGAGGGTGGGCATGGACTCTGCAGGCACTTTCCGGTCCACAGACAGGGCGGAGGAGGGTaGGGCCGTGTCAGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: EGWSEGGHGLCRHFPVHRQGGGG*GRVRAR
Trigger: CCTTGCCCTGACACGGCCCCACCCTCCTCCGCCCTG...TCTGTGGACCGGAAAGTGCCTGCAGAGTCCATGCCCACCCTCACTCCAGCCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR GCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTCCCGCCAGGCTCGAGTaGGCAGCGCAGGCCCCGGAT +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAPARLE*AAQAPD
Trigger: ATCCGGGGCCTGCGCTGCGCACTCGAGCCTGGCGGG...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS-3UTR TCA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGAGCCGAGGCCGAGGCTaGGGCCGCAGTGTCCGCGAA +
Preference number: 4 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMSRGRG*GRSVRE
Trigger: TTCGCGGACACTGCGGCCTCAGCCTCGGCCTCGGCT...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS-3UTR GCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTCCAGGGCCCTCGGCTTaGCTCACCTCCATCGCTCCC +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAPGPSA*LTSIAP
Trigger: GGGAGCGATGGAGGTGAGGCAAGCCGAGGGCCCTGG...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS-3UTR GCA 90 bp GAAGGCTGGAGTGAGGGTGGGCATGGACTCTGCAGGCACTTTCCGGTCCACAGAAGGAGGGGATTGTCCTaGTGCCCAGGCCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: EGWSEGGHGLCRHFPVHRRRGLS*CPGPTV
Trigger: AACTGTGGGGCCTGGGCAGCAGGACAATCCCCTCCT...TCTGTGGACCGGAAAGTGCCTGCAGAGTCCATGCCCACCCTCACTCCAGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp TCCACCATCATCATGGCCTCCTTCTCAGACATTACGAGCTGGCAGAACTGGTCCTCCGAGGCCGGCCCTTaGGGGCCTGCTTCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: STIIMASFSDITSWQNWSSEAGP*GPASLC
Trigger: GCAAAGGGAAGCAGGCCCCCAAGGGCCGGCCTCGGA...GGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCATGATGATGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTTTTCCCGGCCCGGAGTaGAGGAGGTCTCGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAFPGPE*RRSRRL
Trigger: TAGCCTTCGAGACCTCCTTCACTCCGGGCCGGGAAA...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTTTCTCTCCCGAGGCCTaGGACCGGCTGCCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAFSPEA*DRLPFC
Trigger: ACAGAAAGGCAGCCGGTCGCAGGCCTCGGGAGAGAA...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTGCCCTGGCTCTCCACTaGCATTCCCTCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAALALH*HSLLSR
Trigger: CCTGGAAAGGAGGGAATGCCAGTGGAGAGCCAGGGC...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS-3UTR CCA 90 bp CTTCCCCATCAGGTGCTCTGGAATTCCCTTCAGGCCTGTCTTAGCCTGCAGCTGCATGGCAGAGAGGCTTaGGCCCCCACTGGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: LPHQVLWNSLQACLSLQLHGREA*APTGKS
Trigger: GCTCTTACCAGTGGGGGCCCAAGCCTCTCTGCCATG...CAGCTGCAGGCTAAGACAGGCCTGAAGGGAATTCCAGAGCACCTGATGGGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp GAAGGCTGGAGTGAGGGTGGGCATGGACTCTGCAGGCACTTTCCGGTCCACAGAGCAGTGGGTTCTCCCTaGGTCTTGCAAGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: EGWSEGGHGLCRHFPVHRAVGSP*VLQDSS
Trigger: ACTGGAGTCTTGCAAGACCCAGGGAGAACCCACTGC...TCTGTGGACCGGAAAGTGCCTGCAGAGTCCATGCCCACCCTCACTCCAGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp GAGGGTGGGGCCGTGTCAGGGCAAGGAGGCCTGATGGCTTTCAGTTCACTATTGGCCAGTTTGGATTCATaGGCCTTGAGGGTGCCAACC +
Preference number: 4 (lower is better)
Translates to: EGGAVSGQGGLMAFSSLLASLDS*ALRVPT
Trigger: GGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGC...CAATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTGACACGGCCCCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGGGTGGGCATGGACTCTaGAGGCACTTTCCGGTCCAC +
Preference number: 4 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMGGHGL*RHFPVH
Trigger: GTGGACCGGAAAGTGCCTGCAGAGTCCATGCCCACC...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp CTTGGCCTTGTTCTTCTCCAACCTTTCGGAGCAGCTCCCGGATCTTCTCTGCATAGGGGATTGTCCTGCTaGCCAGGCCCCACAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LGLVLLQPFGAAPGSSLHRGLSC*PGPTVG
Trigger: GCCAACTGTGGGGCCTGGGCAGCAGGACAATCCCCT...ATGCAGAGAAGATCCGGGAGCTGCTCCGAAAGGTTGGAGAAGAACAAGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR GCA 90 bp TTGGTGCTGGAGTCCGAGTCTTGTCTGCAAGCCAAGCTTCGTTCATCCAGTGAGCGGCCCTTGGGGGCCTaGTTCCCTTTGCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: LVLESESCLQAKLRSSSERPLGA*FPLLLP
Trigger: GGGCAAAAGCAAAGGGAAGCAGGCCCCCAAGGGCCG...CTCACTGGATGAACGAAGCTTGGCTTGCAGACAAGACTCGGACTCCAGCACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR GCA 90 bp GTGAAAAATCTGCCGGGGAGGACAGAAAGCCGCCTGAGTGCCTGCCAAAGACGTTGGGTAGGCTGGCCTTaGTCTTCACTCCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VKNLPGRTESRLSACQRRWVGWP*SSLLLR
Trigger: CCTCAGCAGGAGTGAAGAGCAAGGCCAGCCTACCCA...ACGTCTTTGGCAGGCACTCAGGCGGCTTTCTGTCCTCCCCGGCAGATTTTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTCTCTGGAGTTGTTACTaGTGCCGGTCCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWALWSCY*CRSSST
Trigger: GGTGGAGGAGGACCGGCACCAGTAACAACTCCAGAG...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GAGGGTGGGGCCGTGTCAGGGCAAGGAGGCCTGATGGCTTTCAGTTCACTATTGCCCCGAAACCAGCACTaGCTGACCTTGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: EGGAVSGQGGLMAFSSLLPRNQH*LTLLPT
Trigger: TGTTGGAAGCAAGGTCAGCCAGTGCTGGTTTCGGGG...CAATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTGACACGGCCCCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CAA 72 bp CCGCCTGAGTGCCTGCCAAAGACGTTACTAAAGGTTTaGAGGAGGGGATTGTCCTGCTGCCCAGGCCCCACA +
Preference number: 4 (lower is better)
Translates to: PPECLPKTLLKV*RRGLSCCPGPT
Trigger: TGTGGGGCCTGGGCAGCAGGACAATCCCCTCCTCAAAACCTTTAGTAACGTCTTTGGCAGGCACTCAGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp GTGAAAAATCTGCCGGGGAGGACAGAAAGCCGCCTGAGTGCCTGCCAAAGACGTCCCACTGGTAAGAGCTaGGCCCAGAACACCAGATAC +
Preference number: 4 (lower is better)
Translates to: VKNLPGRTESRLSACQRRPTGKS*AQNTRY
Trigger: GTATCTGGTGTTCTGGGCTCAGCTCTTACCAGTGGG...ACGTCTTTGGCAGGCACTCAGGCGGCTTTCTGTCCTCCCCGGCAGATTTTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTGTGGCCGGCTTTTCCTaGGCCGGTAACAGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: RCARESQIRRMCRKAPPCVAGFS*AGNSQG
Trigger: GCCTTGACTGTTACCGGCTCAGGAAAAGCCGGCCAC...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGTGTCCAAGGGGGTTTaGGGAAGTTTTCCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQVSKGV*GSFPGP
Trigger: CGGGCCGGGAAAACTTCCTCAAACCCCCTTGGACAC...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp TCATCATGGCCTCCTTCTCAGACATTACGAGCTGGCAGAACTGGTCCCCAACATCTCGGGCCAGCTGGGTaGCACCTTGGAGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: SSWPPSQTLRAGRTGPQHLGPAG*HLGGDS
Trigger: ACTGTCACCTCCAAGGTGGCACCCAGCTGGCCCGAG...ATGTTGGGGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCATGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR GCA 90 bp GAGGGTGGGGCCGTGTCAGGGCAAGGAGGCCTGATGGCTTTCAGTTCACTATTGACAGGTCACTGTTGGTaGTGGAGTCCGAGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: EGGAVSGQGGLMAFSSLLTGHCW*WSPSLV
Trigger: GACAAGACTCGGACTCCAGCACCAACAGTGACCTGT...CAATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTGACACGGCCCCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR GCA 90 bp GAGGGTGGGGCCGTGTCAGGGCAAGGAGGCCTGATGGCTTTCAGTTCACTATTGATGCATGACCCATCCTaGAGGAAGGGCTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: EGGAVSGQGGLMAFSSLLMHDPS*RKGSPD
Trigger: ATCTGGAGAGCCCTTCCTGCAGGATGGGTCATGCAT...CAATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTGACACGGCCCCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp TCCACCAGAGAAGGTAGTTTCGTTTCCAGAAGAGGCACTAGGGTTTATGCTAGGGCCCTGGAGAAGGACTaGGTCCTCACGGGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: STREGSFVSRRGTRVYARALEKD*VLTGRP
Trigger: TGGGCGCCCCGTGAGGACCCAGTCCTTCTCCAGGGC...CCTAGCATAAACCCTAGTGCCTCTTCTGGAAACGAAACTACCTTCTCTGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp AGGCTGGCCTTGCTCTTCACTCCTGCTGAGGATGTAGAGAAGACCGGGGGAAAGGAGACTCGAATGCCCTaGAGAAGGACTGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RLALLFTPAEDVEKTGGKETRMP*RRTGSS
Trigger: TGAGGACCCAGTCCTTCTCCAGGGCATTCGAGTCTC...CTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGCAAGGCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTTCTCTGATCCAGCCCTaGCTCTCCACTGGCATTCCC +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPSLIQP*LSTGIP
Trigger: GGGAATGCCAGTGGAGAGCCAGGGCTGGATCAGAGA...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS-3UTR CCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAAGCGGCCATTCCCCATaGCAGAGAGGCTTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCESGHSP*QRGLGP
Trigger: GGGGCCCAAGCCTCTCTGCCATGGGGAATGGCCGCT...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp TTTCAGAGGCTCTTCAGATCTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCAGCGGCCATTCCCCATaGCAGAGAGGCTTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: FQRLFRSDVSAVGFGNMVSGHSP*QRGLGP
Trigger: GGGGCCCAAGCCTCTCTGCCATGGGGAATGGCCGCT...GACCATGTTCCCAAAGCCGACAGCACTGACATCAGATCTGAAGAGCCTCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGCCCAGGCCCCACAGTTaGCCTCTCCTCTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQPRPHS*PLLCGA
Trigger: AGCCCCACAGAGGAGAGGCCAACTGTGGGGCCTGGG...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTACGAGCTGGCAGAACTaGTCCCCAACATTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPTSWQN*SPTLAR
Trigger: CCTGGCCAATGTTGGGGACCAGTTCTGCCAGCTCGT...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AGGCTGGCCTTGCTCTTCACTCCTGCTGAGGATGTAGAGAAGACCGGGGGAAAGAACATGGTCCGGCTCTaGAGTTGTTACTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: RLALLFTPAEDVEKTGGKNMVRL*SCYWCR
Trigger: CCGGCACCAGTAACAACTCCAGAGCCGGACCATGTT...CTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGCAAGGCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp GAAGGCTGGAGTGAGGGTGGGCATGGACTCTGCAGGCACTTTCCGGTCCACAGAGTGGCACTCTTGGCTTaGAGTCTCAAACTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: EGWSEGGHGLCRHFPVHRVALLA*SLKLCV
Trigger: CACACACAGTTTGAGACTCCAAGCCAAGAGTGCCAC...TCTGTGGACCGGAAAGTGCCTGCAGAGTCCATGCCCACCCTCACTCCAGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTAGTCAAAGGTTGCGATaGACTAGGGAGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWASQRLR*TRERCS
Trigger: GGAGCACCTCTCCCTAGTTCATCGCAACCTTTGACT...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp ACAGAGGAGCTTGGAGTTTCTCCATGCCTAGGACCTTGCCAGTTTGGATTCATGGTGGGAAGGCTGGAGTaGGGGTGGGCATGGACTCTG +
Preference number: 4 (lower is better)
Translates to: TEELGVSPCLGPCQFGFMVGRLE*GWAWTL
Trigger: CAGAGTCCATGCCCACCCTCACTCCAGCCTTCCCAC...CATGAATCCAAACTGGCAAGGTCCTAGGCATGGAGAAACTCCAAGCTCCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp AGGCTGGCCTTGCTCTTCACTCCTGCTGAGGATGTAGAGAAGACCGGGGGAAAGGATGAGGTGCCACATTaGTGCATGACCCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: RLALLFTPAEDVEKTGGKDEVPH*CMTHPA
Trigger: TGCAGGATGGGTCATGCATCAATGTGGCACCTCATC...CTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGCAAGGCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTGAGGCTCTTCAGATCTaGTGTCAGTGCTGTCGGCTT +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAEALQI*CQCCRL
Trigger: AAGCCGACAGCACTGACATCAGATCTGAAGAGCCTC...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TCATCATGGCCTCCTTCTCAGACATTACGAGCTGGCAGAACTGGTCCCCAACATGTGTCCAAGGGGGTTTaGGGAAGTTTTCCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: SSWPPSQTLRAGRTGPQHVSKGV*GSFPGP
Trigger: CGGGCCGGGAAAACTTCCTCAAACCCCCTTGGACAC...ATGTTGGGGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCATGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGGCTCTTCACTCCTGCTaGGGATGTAGAGAAGACCGG +
Preference number: 4 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMALHSC*GCREDR
Trigger: CCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGC...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGAGTACCTCTTCATCATaGGCACCCTCCCCGATGGGA +
Preference number: 4 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMSTSSS*APSPMG
Trigger: TCCCATCGGGGAGGGTGCTCATGATGAAGAGGTACT...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GTGAAAAATCTGCCGGGGAGGACAGAAAGCCGCCTGAGTGCCTGCCAAAGACGTTGGATTCATGAGCCTTaGGGGTGCCAACCGCATCTT +
Preference number: 4 (lower is better)
Translates to: VKNLPGRTESRLSACQRRWIHEP*GCQPHL
Trigger: AAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCA...ACGTCTTTGGCAGGCACTCAGGCGGCTTTCTGTCCTCCCCGGCAGATTTTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp GAGGGTGGGGCCGTGTCAGGGCAAGGAGGCCTGATGGCTTTCAGTTCACTATTGGTCAACCTTCAGTGTTaGGGCAGCGTAGAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: EGGAVSGQGGLMAFSSLLVNLQC*GSVEES
Trigger: ACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGAC...CAATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTGACACGGCCCCACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp GCCATACTCCTCATAGAGTCGCTTACGGAGGGTCTGGTCCAGGTACCAACTTTGGGTAGTGACCACAGCTaGGGAAGCCACTATGCCCTG +
Preference number: 4 (lower is better)
Translates to: AILLIESLTEGLVQVPTLGSDHS*GSHYAL
Trigger: CAGGGCATAGTGGCTTCCGCAGCTGTGGTCACTACC...CAAAGTTGGTACCTGGACCAGACCCTCCGTAAGCGACTCTATGAGGAGTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR GCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTAGGCCTGTCTTAGCCTaGAGCTGCTCCTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPRPVLA*SCSSES
Trigger: TGACTCTGAGGAGCAGCTGCAGGCTAAGACAGGCCT...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAGCAACAGCTCAGCACTaGGCTCCCCATTGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCEATAQH*APHWGP
Trigger: TGGGCCCCAATGGGGAGCGCAGTGCTGAGCTGTTGC...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAAAGATCGCTAGGTCCTaGGGCACCGCCCCGCTCATG +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCEKIARS*GTAPLM
Trigger: CATGAGCGGGGCGGTGCCCCAGGACCTAGCGATCTT...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS-3UTR CCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTCCCCATCAGGTGCTCTaGAATTCCCTTCAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPPHQVL*NSLQAC
Trigger: ACAGGCCTGAAGGGAATTCCAGAGCACCTGATGGGG...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCACAGGGCGGAGGAGGGTaGGGCCGTGTCAGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSQGGGG*GRVRAR
Trigger: CCTTGCCCTGACACGGCCCCACCCTCCTCCGCCCTG...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CTTCCCCATCAGGTGCTCTGGAATTCCCTTCAGGCCTGTCTTAGCCTGCAGCTGGAAAGTTGGGTAGGCTaGCCTTGCTCTTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: LPHQVLWNSLQACLSLQLESWVG*PCSSLL
Trigger: CAGGAGTGAAGAGCAAGGCCAGCCTACCCAACTTTC...CAGCTGCAGGCTAAGACAGGCCTGAAGGGAATTCCAGAGCACCTGATGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGCTTCACCCCGTCTCCTaGGATGGGCTTTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQLHPVS*DGLCQR
Trigger: CCTCTGACAAAGCCCATCCCAGGAGACGGGGTGAAG...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGTCCTGGGAAAAGCAGTaGGTTCTCCCTGGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMSWEKQ*VLPGSC
Trigger: GCAAGACCCAGGGAGAACCCACTGCTTTTCCCAGGA...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTTCCTGGGAAAAGCAGTaGGTTCTCCCTGGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPSWEKQ*VLPGSC
Trigger: GCAAGACCCAGGGAGAACCCACTGCTTTTCCCAGGA...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR CAA 72 bp TGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTTaGTCAGAGGTCACGTGCAGAGACGCTATCAGACTT +
Preference number: 4 (lower is better)
Translates to: WGIASPRLLGWA*SEVTCRDAIRL
Trigger: AAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TCATCATGGCCTCCTTCTCAGACATTACGAGCTGGCAGAACTGGTCCCCAACATGCCTTTACACAGGCCTaGGCTCAGGCTCTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSWPPSQTLRAGRTGPQHAFTQA*AQALKA
Trigger: AGCCTTGAGAGCCTGAGCTCAGGCCTGTGTAAAGGC...ATGTTGGGGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCATGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAGAATCTGCAGAGGAGTaGGACTCGGGCCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCEESAEE*DSGQLG
Trigger: ACCCAGCTGGCCCGAGTCTCACTCCTCTGCAGATTC...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp TCCACCAGAGAAGGTAGTTTCGTTTCCAGAAGAGGCACTAGGGTTTATGCTAGGGGCATCTCAATGGGCTaGGTGAGGCTGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: STREGSFVSRRGTRVYARGISMG*VRLLVG
Trigger: GCCCACCAGCAGCCTCACTCAGCCCATTGAGATGCC...CCTAGCATAAACCCTAGTGCCTCTTCTGGAAACGAAACTACCTTCTCTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTTACATCTTTCAGCACTaGCTGGCCAACTTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAYIFQH*LANFQG
Trigger: CCCCTGAAAGTTGGCCAGTCAGTGCTGAAAGATGTA...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTATCAACCTCCGGAAGTaGAAGAAACGGCAGGCTACA +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAINLRK*KKRQAT
Trigger: TGTAGCCTGCCGTTTCTTTCACTTCCGGAGGTTGAT...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp AGGCTGGCCTTGCTCTTCACTCCTGCTGAGGATGTAGAGAAGACCGGGGGAAAGGTACCCCTTTTCGAGTaGAGATCAACCTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: RLALLFTPAEDVEKTGGKVPLFE*RSTSGS
Trigger: ACTTCCGGAGGTTGATCTTCACTCGAAAAGGGGTAC...CTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGCAAGGCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGGTGTCCAAGGGGGTTTaGGGAAGTTTTCCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: STTFLCQPSVLRQRRREWVSKGV*GSFPGP
Trigger: CGGGCCGGGAAAACTTCCTCAAACCCCCTTGGACAC...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTTCACAAAGCCAGGAGTaGGAAGTATGGGGATCTAGC +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWASQSQE*EVWGSS
Trigger: GCTAGATCCCCATACTTCTCACTCCTGGCTTTGTGA...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTAGTACCTCTTCATCATaGGCACCCTCCCCGATGGGA +
Preference number: 4 (lower is better)
Translates to: RCARESQIRRMCRKAPPCSTSSS*APSPMG
Trigger: TCCCATCGGGGAGGGTGCTCATGATGAAGAGGTACT...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGAGATGCCTGAATTCCTaGGTCAGGCGGAAACAGTGC +
Preference number: 4 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMRCLNS*VRRKQC
Trigger: GCACTGTTTCCGCCTGACTCAGGAATTCAGGCATCT...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAATTCTCTCCCGAGGCCTaGGACCGGCTGCCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCEFSPEA*DRLPFC
Trigger: ACAGAAAGGCAGCCGGTCGCAGGCCTCGGGAGAGAA...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp GAAGGCTGGAGTGAGGGTGGGCATGGACTCTGCAGGCACTTTCCGGTCCACAGAGATACAAGGGCAGTTTaGTTTAATTCCCCACTTGCC +
Preference number: 4 (lower is better)
Translates to: EGWSEGGHGLCRHFPVHRDTRAV*FNSPLA
Trigger: GGCAAGTGGGGAATTAAAGCAAACTGCCCTTGTATC...TCTGTGGACCGGAAAGTGCCTGCAGAGTCCATGCCCACCCTCACTCCAGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR GCA 90 bp CTTGGCCTTGTTCTTCTCCAACCTTTCGGAGCAGCTCCCGGATCTTCTCTGCATTGGAGTTGTTACTGGTaGCGGTCCTCCTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: LGLVLLQPFGAAPGSSLHWSCYW*RSSSTR
Trigger: TCTGGTGGAGGAGGACCGGCACCAGTAACAACTCCA...ATGCAGAGAAGATCCGGGAGCTGCTCCGAAAGGTTGGAGAAGAACAAGGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTCAGCGGAGAGACCTTTaGAGTGGAGTTGAACGAGTC +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPQRRDL*SGVERV
Trigger: GACTCGTTCAACTCCACTGCAAAGGTCTCTCCGCTG...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp GTGAAAAATCTGCCGGGGAGGACAGAAAGCCGCCTGAGTGCCTGCCAAAGACGTTTGAGCACCATTGGCTaGCCATCTTCTGACCGTAGT +
Preference number: 4 (lower is better)
Translates to: VKNLPGRTESRLSACQRRLSTIG*PSSDRS
Trigger: ACTACGGTCAGAAGATGGGCAGCCAATGGTGCTCAA...ACGTCTTTGGCAGGCACTCAGGCGGCTTTCTGTCCTCCCCGGCAGATTTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR GCA 90 bp AGGCTGGCCTTGCTCTTCACTCCTGCTGAGGATGTAGAGAAGACCGGGGGAAAGCAAATCAGGAGAATGTaGAGGAAAGCCCCGCCATGT +
Preference number: 4 (lower is better)
Translates to: RLALLFTPAEDVEKTGGKQIRRM*RKAPPC
Trigger: ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTG...CTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGCAAGGCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAAACTCTCCCGAGGCCTaGGACCGGCTGCCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPNSPEA*DRLPFC
Trigger: ACAGAAAGGCAGCCGGTCGCAGGCCTCGGGAGAGTT...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507996.5
CDS-3UTR CCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGCATGGCAGAGAGGCTTaGGCCCCCACTGGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQHGREA*APTGKS
Trigger: GCTCTTACCAGTGGGGGCCCAAGCCTCTCTGCCATG...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp AGGCTGGCCTTGCTCTTCACTCCTGCTGAGGATGTAGAGAAGACCGGGGGAAAGGCTAGAGGAGAGAGTTaGCATCTCAATGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: RLALLFTPAEDVEKTGGKARGES*HLNGLS
Trigger: ACTCAGCCCATTGAGATGCCAACTCTCTCCTCTAGC...CTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGCAAGGCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp TCCACCAGAGAAGGTAGTTTCGTTTCCAGAAGAGGCACTAGGGTTTATGCTAGGCACTGCGCTCCCCATTaGGGCCCAGCTTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: STREGSFVSRRGTRVYARHCAPH*GPASPS
Trigger: TGATGGGGAAGCTGGGCCCCAATGGGGAGCGCAGTG...CCTAGCATAAACCCTAGTGCCTCTTCTGGAAACGAAACTACCTTCTCTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp GCACCCTCCCCGATGGGAATCCCAACATACACCATCACATTAACAGCATCAGACACGAGCTGGCAGAACTaGTCCCCAACATTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: APSPMGIPTYTITLTASDTSWQN*SPTLAR
Trigger: CCTGGCCAATGTTGGGGACCAGTTCTGCCAGCTCGT...GTCTGATGCTGTTAATGTGATGGTGTATGTTGGGATTCCCATCGGGGAGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGCAGGGCGGAGGAGGGTaGGGCCGTGTCAGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMQGGGG*GRVRAR
Trigger: CCTTGCCCTGACACGGCCCCACCCTCCTCCGCCCTG...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTCAGGGCGGAGGAGGGTaGGGCCGTGTCAGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTIQGGGG*GRVRAR
Trigger: CCTTGCCCTGACACGGCCCCACCCTCCTCCGCCCTG...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTTTGTTGCTGGGGTCATaGAGACACAGAAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPLLLGS*RHRSLP
Trigger: TGGGAGGCTTCTGTGTCTCCATGACCCCAGCAACAA...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GCCATACTCCTCATAGAGTCGCTTACGGAGGGTCTGGTCCAGGTACCAACTTTGGAGCACCCTCCCCGATaGGAATCCCAACATACACCA +
Preference number: 4 (lower is better)
Translates to: AILLIESLTEGLVQVPTLEHPPR*ESQHTP
Trigger: TGGTGTATGTTGGGATTCCCATCGGGGAGGGTGCTC...CAAAGTTGGTACCTGGACCAGACCCTCCGTAAGCGACTCTATGAGGAGTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp GTGAAAAATCTGCCGGGGAGGACAGAAAGCCGCCTGAGTGCCTGCCAAAGACGTCTTCACAGAGGAGCTTaGAGTTTCTCCATGCCTAGG +
Preference number: 4 (lower is better)
Translates to: VKNLPGRTESRLSACQRRLHRGA*SFSMPR
Trigger: CCTAGGCATGGAGAAACTCCAAGCTCCTCTGTGAAG...ACGTCTTTGGCAGGCACTCAGGCGGCTTTCTGTCCTCCCCGGCAGATTTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGCACAGGATAGGGATGTaGCACTCTTGGCTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMHRIGM*HSWLGV
Trigger: GACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACCCCGTCTCCTGGGATaGGCTTTGTCAGAGGTCACG +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPPRLLG*ALSEVT
Trigger: CGTGACCTCTGACAAAGCCCATCCCAGGAGACGGGG...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCCTGGGAAAAGCAGTaGGTTCTCCCTGGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: RCARESQIRRMCRKAPPCSWEKQ*VLPGSC
Trigger: GCAAGACCCAGGGAGAACCCACTGCTTTTCCCAGGA...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR CAA 72 bp GACCACAGCTGCGGAAGCCACTATGCCCTGGCCAACTaGTTCCAGTGTTTTTCCTGCCTCTTTGTTTTCGGC +
Preference number: 4 (lower is better)
Translates to: DHSCGSHYALAN*FQCFSCLFVFG
Trigger: GCCGAAAACAAAGAGGCAGGAAAAACACTGGAACAAGTTGGCCAGGGCATAGTGGCTTCCGCAGCTGTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAGCCTTTACACAGGCCTaGGCTCAGGCTCTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPAFTQA*AQALKA
Trigger: AGCCTTGAGAGCCTGAGCTCAGGCCTGTGTAAAGGC...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCGGCATCTCAATGGGCTaGGTGAGGCTGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFGISMG*VRLLVG
Trigger: GCCCACCAGCAGCCTCACTCAGCCCATTGAGATGCC...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGCGACACTTGTGCAGATaGGGTGCCACATTGATGCAT +
Preference number: 4 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMRHLCR*GATLMH
Trigger: ATGCATCAATGTGGCACCTCATCTGCACAAGTGTCG...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp CTTGGCCTTGTTCTTCTCCAACCTTTCGGAGCAGCTCCCGGATCTTCTCTGCATGAGGCTCTTCAGATCTaGTGTCAGTGCTGTCGGCTT +
Preference number: 4 (lower is better)
Translates to: LGLVLLQPFGAAPGSSLHEALQI*CQCCRL
Trigger: AAGCCGACAGCACTGACATCAGATCTGAAGAGCCTC...ATGCAGAGAAGATCCGGGAGCTGCTCCGAAAGGTTGGAGAAGAACAAGGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCATTTCCCGGCCCGGAGTaGAGGAGGTCTCGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPFPGPE*RRSRRL
Trigger: TAGCCTTCGAGACCTCCTTCACTCCGGGCCGGGAAA...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GAGGGTGGGGCCGTGTCAGGGCAAGGAGGCCTGATGGCTTTCAGTTCACTATTGCCTCGTCAATTGTCTTaGGTACCTCTTCATCATGAG +
Preference number: 4 (lower is better)
Translates to: EGGAVSGQGGLMAFSSLLPRQLS*VPLHHE
Trigger: CTCATGATGAAGAGGTACTCAAGACAATTGACGAGG...CAATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTGACACGGCCCCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp CTTGGCCTTGTTCTTCTCCAACCTTTCGGAGCAGCTCCCGGATCTTCTCTGCATAGATGCCTGAATTCCTaGGTCAGGCGGAAACAGTGC +
Preference number: 4 (lower is better)
Translates to: LGLVLLQPFGAAPGSSLHRCLNS*VRRKQC
Trigger: GCACTGTTTCCGCCTGACTCAGGAATTCAGGCATCT...ATGCAGAGAAGATCCGGGAGCTGCTCCGAAAGGTTGGAGAAGAACAAGGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGAGAGTTTGGAATACTaGCCACACTGGCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQESLEY*PHWLWV
Trigger: CACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTC...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp CTGCTGCAAGGCCAGTGTCTGAGATCCTCACTGTGTTTGGGGTGGAGCTGGCGGCTTGTACCAGTTATGTaGTTTCCCCTATCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: LLQGQCLRSSLCLGWSWRLVPVM*FPLSPN
Trigger: GTTTGGAGATAGGGGAAATCACATAACTGGTACAAG...CCGCCAGCTCCACCCCAAACACAGTGAGGATCTCAGACACTGGCCTTGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp GCCATACTCCTCATAGAGTCGCTTACGGAGGGTCTGGTCCAGGTACCAACTTTGTACATCTTTCAGCACTaGCTGGCCAACTCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: AILLIESLTEGLVQVPTLYIFQH*LANSPE
Trigger: CTCGGGAGAGTTGGCCAGTCAGTGCTGAAAGATGTA...CAAAGTTGGTACCTGGACCAGACCCTCCGTAAGCGACTCTATGAGGAGTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507996.5
CDS-3UTR GCA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTCAATGGAGACTCGAATaGCCTGGAGAAGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: RCARESQIRRMCRKAPPCQWRLE*PGEGLG
Trigger: ACCCAGTCCTTCTCCAGGGCATTCGAGTCTCCATTG...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTAGGGGATTGTCCTGCTaGCCAGGCCCCACAGTTGGC +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFRGLSC*PGPTVG
Trigger: GCCAACTGTGGGGCCTGGGCAGCAGGACAATCCCCT...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAGGAGGGGATTGTCCTaGTGCCCAGGCCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPRRGLS*CPGPTV
Trigger: AACTGTGGGGCCTGGGCAGCAGGACAATCCCCTCCT...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGAGCTTCCCCATCAGGTaGTCTGGAATTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQSFPIR*SGIPFR
Trigger: CCTGAAGGGAATTCCAGAGCACCTGATGGGGAAGCT...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp TCCACCATCATCATGGCCTCCTTCTCAGACATTACGAGCTGGCAGAACTGGTCCATGCATGACCCATCCTaGAGGAAGGGCTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: STIIMASFSDITSWQNWSMHDPS*RKGSPD
Trigger: ATCTGGAGAGCCCTTCCTGCAGGATGGGTCATGCAT...GGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCATGATGATGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTCAGCGGAGAGACCTTTaGAGTGGAGTTGAACGAGTC +
Preference number: 4 (lower is better)
Translates to: RCARESQIRRMCRKAPPCQRRDL*SGVERV
Trigger: GACTCGTTCAACTCCACTGCAAAGGTCTCTCCGCTG...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACCGGGGGAAAGGGTATaGCTGTGTCCAAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPPGERV*LCPRGF
Trigger: AAACCCCCTTGGACACAGGCATACCCTTTCCCCCGG...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGTGGGTAGGCTGGCCTTaGTCTTCACTCCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQWVGWP*SSLLLR
Trigger: CCTCAGCAGGAGTGAAGAGCAAGGCCAGCCTACCCA...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGGGGTATCAGTCAAGTTaGAGGCCCGCTTTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMGYQSS*RPALKH
Trigger: ATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCC...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp GAGGGTGGGGCCGTGTCAGGGCAAGGAGGCCTGATGGCTTTCAGTTCACTATTGGTCAGGCGGAAACAGTaGTTTACATGTTCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: EGGAVSGQGGLMAFSSLLVRRKQ*FTCSGD
Trigger: ATCTCCAGAACATGTAAAGCACTGTTTCCGCCTGAC...CAATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTGACACGGCCCCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTGCCCTGGAGAAGGACTaGGTCCTCACGGGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: LSDFHQACLSNYPILVPVALEKD*VLTGRP
Trigger: TGGGCGCCCCGTGAGGACCCAGTCCTTCTCCAGGGC...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp TCCACCATCATCATGGCCTCCTTCTCAGACATTACGAGCTGGCAGAACTGGTCCCTGGCCATTGTGCAATaGAGACTCGAATGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: STIIMASFSDITSWQNWSLAIVQ*RLECPG
Trigger: TCCAGGGCATTCGAGTCTCCATTGCACAATGGCCAG...GGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCATGATGATGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp AGGCTGGCCTTGCTCTTCACTCCTGCTGAGGATGTAGAGAAGACCGGGGGAAAGACAGATGCAACCCATTaGCATCTGACAGGAACCGAA +
Preference number: 4 (lower is better)
Translates to: RLALLFTPAEDVEKTGGKTDATH*HLTGTE
Trigger: TTCGGTTCCTGTCAGATGCCAATGGGTTGCATCTGT...CTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGCAAGGCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTTCCGAGGCCGGCCCTTaGGGGCCTGCTTCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LSDFHQACLSNYPILVPVSEAGP*GPASLC
Trigger: GCAAAGGGAAGCAGGCCCCCAAGGGCCGGCCTCGGA...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp TTTCAGAGGCTCTTCAGATCTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCACGAGCTGGCAGAACTaGTCCCCAACATTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FQRLFRSDVSAVGFGNMVTSWQN*SPTLAR
Trigger: CCTGGCCAATGTTGGGGACCAGTTCTGCCAGCTCGT...GACCATGTTCCCAAAGCCGACAGCACTGACATCAGATCTGAAGAGCCTCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTTCAGACATTACGAGCTaGCAGAACTGGTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPSDITS*QNWSPT
Trigger: TGTTGGGGACCAGTTCTGCCAGCTCGTAATGTCTGA...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTAGATTCTCTGGTTCGTaGGACTGTCCCTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPRFSGS*DCPFAH
Trigger: GTGTGCAAAGGGACAGTCCCACGAACCAGAGAATCT...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TTTCAGAGGCTCTTCAGATCTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCTCTGGAGTTGTTACTaGTGCCGGTCCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: FQRLFRSDVSAVGFGNMVLWSCY*CRSSST
Trigger: GGTGGAGGAGGACCGGCACCAGTAACAACTCCAGAG...GACCATGTTCCCAAAGCCGACAGCACTGACATCAGATCTGAAGAGCCTCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp TCTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTCGGCTTTGGGAACATaGTCCGGCTCTGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: SDVSAVGFGNMVRLWSCYSALGT*SGSGVV
Trigger: AACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGA...GTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp ACAGAAGCCTCCCATCACAAAGCCAGGAGTGAGAAGTATGGGGATCTAGCACATCAGTGCTGTCGGCTTTaGGAACATGGTCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TEASHHKARSEKYGDLAHQCCRL*EHGPAL
Trigger: CAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTG...ATGTGCTAGATCCCCATACTTCTCACTCCTGGCTTTGTGATGGGAGGCTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACAGTGCTGTCGGCTTTaGGAACATGGTCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPQCCRL*EHGPAL
Trigger: CAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTG...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GCCATACTCCTCATAGAGTCGCTTACGGAGGGTCTGGTCCAGGTACCAACTTTGTGTTGTTGGAGGCAGTaGGACCCAGCAACAGACTGT +
Preference number: 4 (lower is better)
Translates to: AILLIESLTEGLVQVPTLCCWRQ*DPATDC
Trigger: ACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACA...CAAAGTTGGTACCTGGACCAGACCCTCCGTAAGCGACTCTATGAGGAGTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGCTTCGGTTTTGTTGTTaGAGGCAGTGGGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQLRFCC*RQWDPA
Trigger: TGCTGGGTCCCACTGCCTCCAACAACAAAACCGAAG...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTTGTTGCTGGGGTCATaGAGACACAGAAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RCARESQIRRMCRKAPPCLLLGS*RHRSLP
Trigger: TGGGAGGCTTCTGTGTCTCCATGACCCCAGCAACAA...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGACCCCGTCTCCTGGGATaGGCTTTGTCAGAGGTCACG +
Preference number: 4 (lower is better)
Translates to: ISNQENVQESPAMFRQFGPRLLG*ALSEVT
Trigger: CGTGACCTCTGACAAAGCCCATCCCAGGAGACGGGG...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGCTTCACCCCGTCTCCTaGGATGGGCTTTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: STTFLCQPSVLRQRRREWLHPVS*DGLCQR
Trigger: CCTCTGACAAAGCCCATCCCAGGAGACGGGGTGAAG...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TCTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACGTTCACAGGAGAGTGTaGGGAATAGCTTCACCCCGT +
Preference number: 4 (lower is better)
Translates to: SDVSAVGFGNMVRLWSCYVHRRV*GIASPR
Trigger: ACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAAC...GTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
3UTR CAA 72 bp AGAGGCTCTTCAGATCTGATGTCAGTGCTGTCGGCTTaGGGAACATGGTCCGGCTCTGGAGTTGTTACTGGT +
Preference number: 4 (lower is better)
Translates to: RGSSDLMSVLSA*GTWSGSGVVTG
Trigger: ACCAGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAGATCTGAAGAGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACAACCCATTGGCATCTaGCAGGAACCGAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPQPIGI*QEPKLS
Trigger: CGAGAGCTTCGGTTCCTGTCAGATGCCAATGGGTTG...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTTGTAGGGACCTCGGCTaGATATCTCTTGTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWACRDLG*ISLVAF
Trigger: AAAAGCTACAAGAGATATTCAGCCGAGGTCCCTACA...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAGGACAGAAAGCCGCCTaGGTGCCTGCCAAAGACGTT +
Preference number: 4 (lower is better)
Translates to: ISNQENVQESPAMFRQFGGQKAA*VPAKDV
Trigger: AACGTCTTTGGCAGGCACTCAGGCGGCTTTCTGTCC...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGAGCTTTGTTCTCCTGTaGAAAATCTGCCGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQSFVLL*KICRGG
Trigger: TCCTCCCCGGCAGATTTTTCACAGGAGAACAAAGCT...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp CTTGGCCTTGTTCTTCTCCAACCTTTCGGAGCAGCTCCCGGATCTTCTCTGCATTACATCTTTCAGCACTaGCTGGCCAACTTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LGLVLLQPFGAAPGSSLHYIFQH*LANFQG
Trigger: CCCCTGAAAGTTGGCCAGTCAGTGCTGAAAGATGTA...ATGCAGAGAAGATCCGGGAGCTGCTCCGAAAGGTTGGAGAAGAACAAGGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp TCCACCATCATCATGGCCTCCTTCTCAGACATTACGAGCTGGCAGAACTGGTCCATCAACCTCCGGAAGTaGAAGAAACGGCAGGCTACA +
Preference number: 4 (lower is better)
Translates to: STIIMASFSDITSWQNWSINLRK*KKRQAT
Trigger: TGTAGCCTGCCGTTTCTTTCACTTCCGGAGGTTGAT...GGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCATGATGATGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCGTGGCCGGCTTTTCCTaGGCCGGTAACAGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFVAGFS*AGNSQG
Trigger: GCCTTGACTGTTACCGGCTCAGGAAAAGCCGGCCAC...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTTTTCCCGGCCCGGAGTaGAGGAGGTCTCGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFFPGPE*RRSRRL
Trigger: TAGCCTTCGAGACCTCCTTCACTCCGGGCCGGGAAA...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAGCTCTTCACTCCTGCTaGGGATGTAGAGAAGACCGG +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPALHSC*GCREDR
Trigger: CCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGC...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGCTACCACTGAGGCAATaGTGTGGTCAAGAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMLPLRQ*CGQESW
Trigger: CCAACTTTCTTGACCACATCATTGCCTCAGTGGTAG...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp CTTCCCCATCAGGTGCTCTGGAATTCCCTTCAGGCCTGTCTTAGCCTGCAGCTGGTAGTCGTTTGCATATaGTCTCGAAACCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: LPHQVLWNSLQACLSLQLVVVCI*SRNHPR
Trigger: TCTGGGATGGTTTCGAGATCATATGCAAACGACTAC...CAGCTGCAGGCTAAGACAGGCCTGAAGGGAATTCCAGAGCACCTGATGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACAGTACCTCTTCATCATaGGCACCCTCCCCGATGGGA +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHSTSSS*APSPMG
Trigger: TCCCATCGGGGAGGGTGCTCATGATGAAGAGGTACT...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGGCTGGCCTTGCTCTTCACTCCTGCTGAGGATGTAGAGAAGACCGGGGGAAAGTTCTCTTTTCCATCATaGATCCTCTGCTTCGTCACC +
Preference number: 4 (lower is better)
Translates to: RLALLFTPAEDVEKTGGKFSFPS*ILCFVT
Trigger: GGTGACGAAGCAGAGGATTCATGATGGAAAAGAGAA...CTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGCAAGGCCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTCTCAAACTGTGTGTGTaGACAGTACGACTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWALKLCV*TVRLSC
Trigger: ACAGGAAAGTCGTACTGTTCACACACACAGTTTGAG...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GAGGGTGGGGCCGTGTCAGGGCAAGGAGGCCTGATGGCTTTCAGTTCACTATTGAACACTGGTAATAGGTaGAAATGGTTCCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: EGGAVSGQGGLMAFSSLLNTGNR*KWFLES
Trigger: TGACTCCAGGAACCATTTTCACCTATTACCAGTGTT...CAATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTGACACGGCCCCACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR GCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCGGTGGGCATGGACTCTaGAGGCACTTTCCGGTCCAC +
Preference number: 4 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTGGHGL*RHFPVH
Trigger: GTGGACCGGAAAGTGCCTGCAGAGTCCATGCCCACC...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp TTGGTGCTGGAGTCCGAGTCTTGTCTGCAAGCCAAGCTTCGTTCATCCAGTGAGAGAAAGCCGCCTGAGTaGCTGCCAAAGACGTTACTA +
Preference number: 4 (lower is better)
Translates to: LVLESESCLQAKLRSSSERKPPE*LPKTLL
Trigger: TAGTAACGTCTTTGGCAGGCACTCAGGCGGCTTTCT...CTCACTGGATGAACGAAGCTTGGCTTGCAGACAAGACTCGGACTCCAGCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR GCA 90 bp CTAGGACCTTGCCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTTGCATCAGGGTCACTTTaGTGGGGGCTTAAAAACCCC +
Preference number: 4 (lower is better)
Translates to: LGPCQFGFMSLEGANRIFASGSL*WGLKNP
Trigger: GGGGTTTTTAAGCCCCCAGCAAAGTGACCCTGATGC...AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAATGGAGTTGTTACTGGTaGCGGTCCTCCTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCEWSCYW*RSSSTR
Trigger: TCTGGTGGAGGAGGACCGGCACCAGTAACAACTCCA...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp GCACCCTCCCCGATGGGAATCCCAACATACACCATCACATTAACAGCATCAGACCAGCGGAGAGACCTTTaGAGTGGAGTTGAACGAGTC +
Preference number: 4 (lower is better)
Translates to: APSPMGIPTYTITLTASDQRRDL*SGVERV
Trigger: GACTCGTTCAACTCCACTGCAAAGGTCTCTCCGCTG...GTCTGATGCTGTTAATGTGATGGTGTATGTTGGGATTCCCATCGGGGAGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp GCCAGGATGTATTTTGAGGTCTCTAGATCTATCCCTTCTGCTAGGGAGGAAGAGTGGGTAGGCTGGCCTTaGTCTTCACTCCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ARMYFEVSRSIPSAREEEWVGWP*SSLLLR
Trigger: CCTCAGCAGGAGTGAAGAGCAAGGCCAGCCTACCCA...CTCTTCCTCCCTAGCAGAAGGGATAGATCTAGAGACCTCAAAATACATCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp TCTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACGGGTATCAGTCAAGTTaGAGGCCCGCTTTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SDVSAVGFGNMVRLWSCYGYQSS*RPALKH
Trigger: ATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCC...GTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp CTTGGCCTTGTTCTTCTCCAACCTTTCGGAGCAGCTCCCGGATCTTCTCTGCATCTCCCGGATCTTCTCTaGATCCTTGGCTGCATAGAT +
Preference number: 4 (lower is better)
Translates to: LGLVLLQPFGAAPGSSLHLPDLL*ILGCID
Trigger: ATCTATGCAGCCAAGGATGCAGAGAAGATCCGGGAG...ATGCAGAGAAGATCCGGGAGCTGCTCCGAAAGGTTGGAGAAGAACAAGGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTCTTGGAGTTTCTCCATaGCTAGGACCTTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPLGVSP*LGPCQF
Trigger: AAACTGGCAAGGTCCTAGGCATGGAGAAACTCCAAG...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp CTTGGCCTTGTTCTTCTCCAACCTTTCGGAGCAGCTCCCGGATCTTCTCTGCATCAAATCAGGAGAATGTaGAGGAAAGCCCCGCCATGT +
Preference number: 4 (lower is better)
Translates to: LGLVLLQPFGAAPGSSLHQIRRM*RKAPPC
Trigger: ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTG...ATGCAGAGAAGATCCGGGAGCTGCTCCGAAAGGTTGGAGAAGAACAAGGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTAGTAAAAGTCAGGGCTaGCCATTGTGCAATGGAGAC +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPSKSQG*PLCNGD
Trigger: GTCTCCATTGCACAATGGCCAGCCCTGACTTTTACT...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTACAGATGCAACCCATTaGCATCTGACAGGAACCGAA +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPTDATH*HLTGTE
Trigger: TTCGGTTCCTGTCAGATGCCAATGGGTTGCATCTGT...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp ACAGAAGCCTCCCATCACAAAGCCAGGAGTGAGAAGTATGGGGATCTAGCACATGATCCTCACTGTGTTTaGGGTGGAGCTGGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: TEASHHKARSEKYGDLAHDPHCV*GGAGGS
Trigger: ACTACCGCCAGCTCCACCCCAAACACAGTGAGGATC...ATGTGCTAGATCCCCATACTTCTCACTCCTGGCTTTGTGATGGGAGGCTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp CTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTTGGCTAGAACACCATTaGACTGGCTCCTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: LMSVLSALGTWSGSGVVTWLEHH*TGSFHF
Trigger: GAAGTGGAAGGAGCCAGTCCAATGGTGTTCTAGCCA...AGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp ATCTCGTTTGGTATATTCTGGCAGAGGAAGGTTCTCCATCAGATCTTCAAACCTCCCAGGCCCCACAGTTaGCCTCTCCTCTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: ISFGIFWQRKVLHQIFKPPRPHS*PLLCGA
Trigger: AGCCCCACAGAGGAGAGGCCAACTGTGGGGCCTGGG...AGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAACGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACGGTCACTGTTGGTGCTaGAGTCCGAGTCTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHGHCWC*SPSLVC
Trigger: GCAGACAAGACTCGGACTCCAGCACCAACAGTGACC...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp ACAGAAGCCTCCCATCACAAAGCCAGGAGTGAGAAGTATGGGGATCTAGCACATCCCCATCAGGTGCTCTaGAATTCCCTTCAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TEASHHKARSEKYGDLAHPHQVL*NSLQAC
Trigger: ACAGGCCTGAAGGGAATTCCAGAGCACCTGATGGGG...ATGTGCTAGATCCCCATACTTCTCACTCCTGGCTTTGTGATGGGAGGCTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCACACTGCGCTCCCCATTaGGGCCCAGCTTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSHCAPH*GPASPS
Trigger: TGATGGGGAAGCTGGGCCCCAATGGGGAGCGCAGTG...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp CTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTAGATTCTCTGGTTCGTaGGACTGTCCCTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: LMSVLSALGTWSGSGVVTRFSGS*DCPFAH
Trigger: GTGTGCAAAGGGACAGTCCCACGAACCAGAGAATCT...AGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp CTAGGACCTTGCCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTTCTTCGGTTTTGTTGTTaGAGGCAGTGGGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: LGPCQFGFMSLEGANRIFLRFCC*RQWDPA
Trigger: TGCTGGGTCCCACTGCCTCCAACAACAAAACCGAAG...AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp GTGAAAAATCTGCCGGGGAGGACAGAAAGCCGCCTGAGTGCCTGCCAAAGACGTACCAAGTCTACATCCTaGTCTCCAAATTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: VKNLPGRTESRLSACQRRTKSTS*SPNSWL
Trigger: TAGCCAGGAATTTGGAGACCAGGATGTAGACTTGGT...ACGTCTTTGGCAGGCACTCAGGCGGCTTTCTGTCCTCCCCGGCAGATTTTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTATTGTGAACCTGGTGTaGGGCTCCAGCAGGTATGAA +
Preference number: 4 (lower is better)
Translates to: RCARESQIRRMCRKAPPCIVNLV*GSSRYE
Trigger: TTCATACCTGCTGGAGCCCCACACCAGGTTCACAAT...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTATTGTGAACCTGGTGTaGGGCTCCAGCAGGTATGAA +
Preference number: 4 (lower is better)
Translates to: LMSVLSALGTWSGSGVVTIVNLV*GSSRYE
Trigger: TTCATACCTGCTGGAGCCCCACACCAGGTTCACAAT...AGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTGTGGCACTCTTGGCTTaGAGTCTCAAACTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RCARESQIRRMCRKAPPCVALLA*SLKLCV
Trigger: CACACACAGTTTGAGACTCCAAGCCAAGAGTGCCAC...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GCACCCTCCCCGATGGGAATCCCAACATACACCATCACATTAACAGCATCAGACCACAGGATAGGGATGTaGCACTCTTGGCTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: APSPMGIPTYTITLTASDHRIGM*HSWLGV
Trigger: GACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG...GTCTGATGCTGTTAATGTGATGGTGTATGTTGGGATTCCCATCGGGGAGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAGCAGTGGGTTCTCCCTaGGTCTTGCAAGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCEAVGSP*VLQDSS
Trigger: ACTGGAGTCTTGCAAGACCCAGGGAGAACCCACTGC...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TGGGACTGTCCCTTTGCACACTTCAACCAGGAGAAAACTTCTTCATCACCCATCCAACCCATTGGCATCTaGCAGGAACCGAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: WDCPFAHFNQEKTSSSPIQPIGI*QEPKLS
Trigger: CGAGAGCTTCGGTTCCTGTCAGATGCCAATGGGTTG...GATGGGTGATGAAGAAGTTTTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp CTAGGACCTTGCCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTTCTCGCTTTGAGGCGCTaGATTATCCATCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: LGPCQFGFMSLEGANRIFLALRR*IIHQHH
Trigger: GTGATGCTGATGGATAATTCAGCGCCTCAAAGCGAG...AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGGTGGGAAGGCTGGAGTaGGGGTGGGCATGGACTCTG +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMVGRLE*GWAWTL
Trigger: CAGAGTCCATGCCCACCCTCACTCCAGCCTTCCCAC...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATGCCACATTGATGCATaGCCCATCCTGCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: ISNQENVQESPAMFRQFGCHIDA*PILQEG
Trigger: CCCTTCCTGCAGGATGGGTCATGCATCAATGTGGCA...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCAGTGGCCGGCTTTTCCTaGGCCGGTAACAGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSVAGFS*AGNSQG
Trigger: GCCTTGACTGTTACCGGCTCAGGAAAAGCCGGCCAC...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGGTGACATCCCATTGGTaGCGGCAGGTCTCAATACAG +
Preference number: 4 (lower is better)
Translates to: STTFLCQPSVLRQRRREWVTSHW*RQVSIQ
Trigger: CTGTATTGAGACCTGCCGTCACCAATGGGATGTCAC...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAGAGGCTCTTCAGATCTaGTGTCAGTGCTGTCGGCTT +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPEALQI*CQCCRL
Trigger: AAGCCGACAGCACTGACATCAGATCTGAAGAGCCTC...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACCAGGGCAAGGAGGCCTaGTGGCTTTCAGTTCACTAT +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHQGKEA*WLSVHY
Trigger: ATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTG...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAACAGGGCAAGGAGGCCTaGTGGCTTTCAGTTCACTAT +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCEQGKEA*WLSVHY
Trigger: ATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTG...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGTTCTCTTTTCCATCATaGATCCTCTGCTTCGTCACC +
Preference number: 4 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMFSFPS*ILCFVT
Trigger: GGTGACGAAGCAGAGGATTCATGATGGAAAAGAGAA...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGGGGCTCCAGCAGGTATaGAAACAGCATCACCTAGGA +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQGLQQV*KQHHLG
Trigger: TCCTAGGTGATGCTGTTTTCATACCTGCTGGAGCCC...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAGGGCTCCAGCAGGTATaGAAACAGCATCACCTAGGA +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPGLQQV*KQHHLG
Trigger: TCCTAGGTGATGCTGTTTTCATACCTGCTGGAGCCC...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAAGATGCCTGAATTCCTaGGTCAGGCGGAAACAGTGC +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPRCLNS*VRRKQC
Trigger: GCACTGTTTCCGCCTGACTCAGGAATTCAGGCATCT...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCATTGGTGGCCAGTTTGGATTCATaGGCCTTGAGGGTGCCAACC +
Preference number: 4 (lower is better)
Translates to: FPEEALGFMLGSCDIPLVASLDS*ALRVPT
Trigger: GGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGC...CACCAATGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACGAGAGTTTGGAATACTaGCCACACTGGCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHESLEY*PHWLWV
Trigger: CACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTC...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTCTCAAACTGTGTGTGTaGACAGTACGACTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPLKLCV*TVRLSC
Trigger: ACAGGAAAGTCGTACTGTTCACACACACAGTTTGAG...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTAACACTGGTAATAGGTaGAAATGGTTCCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWANTGNR*KWFLES
Trigger: TGACTCCAGGAACCATTTTCACCTATTACCAGTGTT...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTGTACCTATGGGCCAATaGATCCCACCATTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAVPMGQ*IPPFSN
Trigger: ATTTGAAAATGGTGGGATTCATTGGCCCATAGGTAC...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCGGTAGTGACCACAGCTaGGGAAGCCACTATGCCCTG +
Preference number: 4 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFGSDHS*GSHYAL
Trigger: CAGGGCATAGTGGCTTCCGCAGCTGTGGTCACTACC...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTATCAGTGTCTTTCTGTaGCTCTTGTGCAGAGCTACA +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPISVFL*LLCRAT
Trigger: TGTAGCTCTGCACAAGAGGCACAGAAAGACACTGAT...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTCTCGGGCCAGCTGGGTaGCACCTTGGAGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: LSDFHQACLSNYPILVPVLGPAG*HLGGDS
Trigger: ACTGTCACCTCCAAGGTGGCACCCAGCTGGCCCGAG...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAACAGGTCACTGTTGGTaGTGGAGTCCGAGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCETGHCW*WSPSLV
Trigger: GACAAGACTCGGACTCCAGCACCAACAGTGACCTGT...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp GCCAGGATGTATTTTGAGGTCTCTAGATCTATCCCTTCTGCTAGGGAGGAAGAGAGGCCTGTCTTAGCCTaGAGCTGCTCCTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: ARMYFEVSRSIPSAREEERPVLA*SCSSES
Trigger: TGACTCTGAGGAGCAGCTGCAGGCTAAGACAGGCCT...CTCTTCCTCCCTAGCAGAAGGGATAGATCTAGAGACCTCAAAATACATCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR GCA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTGCAACAGCTCAGCACTaGGCTCCCCATTGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LSDFHQACLSNYPILVPVATAQH*APHWGP
Trigger: TGGGCCCCAATGGGGAGCGCAGTGCTGAGCTGTTGC...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp GGTTTTGTTGTTGGAGGCAGTGGGACCCAGCAACAGACTGTTAAAAAGCTTTGGGGGCCTGCTTCCCTTTaGTTTTGCCCAGCAACAGCT +
Preference number: 4 (lower is better)
Translates to: GFVVGGSGTQQQTVKKLWGPASL*FCPATA
Trigger: AGCTGTTGCTGGGCAAAAGCAAAGGGAAGCAGGCCC...CCAAAGCTTTTTAACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR GCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTGATACAAGGGCAGTTTaGTTTAATTCCCCACTTGCC +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPDTRAV*FNSPLA
Trigger: GGCAAGTGGGGAATTAAAGCAAACTGCCCTTGTATC...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTTGGGTAGGCTGGCCTTaGTCTTCACTCCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFWVGWP*SSLLLR
Trigger: CCTCAGCAGGAGTGAAGAGCAAGGCCAGCCTACCCA...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp GCACCCTCCCCGATGGGAATCCCAACATACACCATCACATTAACAGCATCAGACCTCCCGGATCTTCTCTaGATCCTTGGCTGCATAGAT +
Preference number: 4 (lower is better)
Translates to: APSPMGIPTYTITLTASDLPDLL*ILGCID
Trigger: ATCTATGCAGCCAAGGATGCAGAGAAGATCCGGGAG...GTCTGATGCTGTTAATGTGATGGTGTATGTTGGGATTCCCATCGGGGAGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp CTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTCTTGGAGTTTCTCCATaGCTAGGACCTTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LMSVLSALGTWSGSGVVTLGVSP*LGPCQF
Trigger: AAACTGGCAAGGTCCTAGGCATGGAGAAACTCCAAG...AGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTTGTCAGAGGTCACGTaGAGAGACGCTATCAGACTT +
Preference number: 4 (lower is better)
Translates to: RCARESQIRRMCRKAPPCLSEVT*RDAIRL
Trigger: AAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAA...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACCTGGCCATTGTGCAATaGAGACTCGAATGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHLAIVQ*RLECPG
Trigger: TCCAGGGCATTCGAGTCTCCATTGCACAATGGCCAG...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTATGTTGCGGTTTATCTaGGGGACAAATGTAGACGGT +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPMLRFI*GTNVDG
Trigger: ACCGTCTACATTTGTCCCCCAGATAAACCGCAACAT...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS-3UTR CCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTTTTCTTTGGTGTAAGTaGCAAAGCGAATGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAFLWCK*QSECCG
Trigger: ACCGCAACATTCGCTTTGCCACTTACACCAAAGAAA...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp CTAGGACCTTGCCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTTGAAGCCACTATGCCCTaGCCAACTTGTTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LGPCQFGFMSLEGANRIFEATMP*PTCSSV
Trigger: AACACTGGAACAAGTTGGCCAGGGCATAGTGGCTTC...AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGACTGGTCCCCAACATTaGCCAGGATGTATTTTGAGG +
Preference number: 4 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQTGPQH*PGCILR
Trigger: CCTCAAAATACATCCTGGCCAATGTTGGGGACCAGT...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACTGCCACTTTCTGGTGTaGCTCCACCATCATCATGGC +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHCHFLV*LHHHHG
Trigger: GCCATGATGATGGTGGAGCCACACCAGAAAGTGGCA...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TTTCAGAGGCTCTTCAGATCTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCTGCCACTTTCTGGTGTaGCTCCACCATCATCATGGC +
Preference number: 4 (lower is better)
Translates to: FQRLFRSDVSAVGFGNMVCHFLV*LHHHHG
Trigger: GCCATGATGATGGTGGAGCCACACCAGAAAGTGGCA...GACCATGTTCCCAAAGCCGACAGCACTGACATCAGATCTGAAGAGCCTCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCTCTGGAGTTGTTACTaGTGCCGGTCCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFLWSCY*CRSSST
Trigger: GGTGGAGGAGGACCGGCACCAGTAACAACTCCAGAG...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CAGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACTCTGGAGTTGTTACTaGTGCCGGTCCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: QTVKKLWSQRRDLCSGVELWSCY*CRSSST
Trigger: GGTGGAGGAGGACCGGCACCAGTAACAACTCCAGAG...TTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp TGGGACTGTCCCTTTGCACACTTCAACCAGGAGAAAACTTCTTCATCACCCATCAACATGGTCCGGCTCTaGAGTTGTTACTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: WDCPFAHFNQEKTSSSPINMVRL*SCYWCR
Trigger: CCGGCACCAGTAACAACTCCAGAGCCGGACCATGTT...GATGGGTGATGAAGAAGTTTTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp ACAGAGGAGCTTGGAGTTTCTCCATGCCTAGGACCTTGCCAGTTTGGATTCATGTCGGCTTTGGGAACATaGTCCGGCTCTGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: TEELGVSPCLGPCQFGFMSALGT*SGSGVV
Trigger: AACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGA...CATGAATCCAAACTGGCAAGGTCCTAGGCATGGAGAAACTCCAAGCTCCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGTCGGCTTTGGGAACATaGTCCGGCTCTGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQSALGT*SGSGVV
Trigger: AACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGA...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAGTCTACATCCTGGTCCAGTGCTGTCGGCTTTaGGAACATGGTCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: HIGNYSTVPAVHQVYILVQCCRL*EHGPAL
Trigger: CAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTG...GACCAGGATGTAGACTTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAATGTTGTTGGAGGCAGTaGGACCCAGCAACAGACTGT +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCECCWRQ*DPATDC
Trigger: ACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACA...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGTGTTGTTGGAGGCAGTaGGACCCAGCAACAGACTGT +
Preference number: 4 (lower is better)
Translates to: STTFLCQPSVLRQRRREWCCWRQ*DPATDC
Trigger: ACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACA...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GTTTCGTTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCACCCCGAAACCAGCACTaGCTGACCTTGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: VSFPEEALGFMLGSCDIPPRNQH*LTLLPT
Trigger: TGTTGGAAGCAAGGTCAGCCAGTGCTGGTTTCGGGG...TGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAACGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp GCCATACTCCTCATAGAGTCGCTTACGGAGGGTCTGGTCCAGGTACCAACTTTGTGGTCTCCAAATTCCTaGCTAAAGGCTTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: AILLIESLTEGLVQVPTLWSPNS*LKASGF
Trigger: GAAGCCAGAAGCCTTTAGCCAGGAATTTGGAGACCA...CAAAGTTGGTACCTGGACCAGACCCTCCGTAAGCGACTCTATGAGGAGTATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAGAGCACCCTCCCCGATaGGAATCCCAACATACACCA +
Preference number: 4 (lower is better)
Translates to: ISNQENVQESPAMFRQFGEHPPR*ESQHTP
Trigger: TGGTGTATGTTGGGATTCCCATCGGGGAGGGTGCTC...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGCAGCGTAGAAGAGAGTaGCTGGAGAGTTTGGAATAC +
Preference number: 4 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQQRRRE*LESLEY
Trigger: GTATTCCAAACTCTCCAGCCACTCTCTTCTACGCTG...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAGTTCACAGGAGAGTGTaGGGAATAGCTTCACCCCGT +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPVHRRV*GIASPR
Trigger: ACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAAC...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAGCAGTGGGTTCTCCCTaGGTCTTGCAAGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPAVGSP*VLQDSS
Trigger: ACTGGAGTCTTGCAAGACCCAGGGAGAACCCACTGC...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GTTTCGTTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCATCTTTCAGCACTGACTaGCCAACTCTCCCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: VSFPEEALGFMLGSCDIPSFSTD*PTLPRP
Trigger: AGGCCTCGGGAGAGTTGGCCAGTCAGTGCTGAAAGA...TGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAACGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507996.5
3UTR CAA 72 bp GGCAGAACTGGTCCCCAACATTGGCCAGGATGTATTTaGAGGTCTCTAGATCTATCCCTTCTGCTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GRTGPQHWPGCI*RSLDLSLLLGR
Trigger: CCTCCCTAGCAGAAGGGATAGATCTAGAGACCTCAAAATACATCCTGGCCAATGTTGGGGACCAGTTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGCAGAATAGAATTTCTTaGATTCTCTCCCGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQQNRIS*ILSRGL
Trigger: CAGGCCTCGGGAGAGAATTCAAGAAATTCTATTCTG...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTGAGATGCAAAACTACTaGAAGGGCTGTGTTCAACTT +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPEMQNY*KGCVQL
Trigger: AAGTTGAACACAGCCCTTTCAGTAGTTTTGCATCTC...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTGAGCTACCTGATGCCTaGGATGCAAAACTACTGAAA +
Preference number: 4 (lower is better)
Translates to: RCARESQIRRMCRKAPPCELPDA*DAKLLK
Trigger: TTTCAGTAGTTTTGCATCTCAGGCATCAGGTAGCTC...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTGAATCTGCAGAGGAGTaGGACTCGGGCCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LSDFHQACLSNYPILVPVESAEE*DSGQLG
Trigger: ACCCAGCTGGCCCGAGTCTCACTCCTCTGCAGATTC...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCCCCACTGGTAAGAGCTaGGCCCAGAACACCAGATAC +
Preference number: 4 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTPTGKS*AQNTRY
Trigger: GTATCTGGTGTTCTGGGCTCAGCTCTTACCAGTGGG...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAAGCTTTGTTCTCCTGTaGAAAATCTGCCGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCESFVLL*KICRGG
Trigger: TCCTCCCCGGCAGATTTTTCACAGGAGAACAAAGCT...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTTGCCACATTGATGCATaGCCCATCCTGCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFCHIDA*PILQEG
Trigger: CCCTTCCTGCAGGATGGGTCATGCATCAATGTGGCA...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp GTTTCGTTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCAGATGAGGTGCCACATTaGTGCATGACCCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: VSFPEEALGFMLGSCDIPDEVPH*CMTHPA
Trigger: TGCAGGATGGGTCATGCATCAATGTGGCACCTCATC...TGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAACGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGAAACCCAGTGGATGTTaGAGAGAGTTGTTTCACACA +
Preference number: 4 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMKPSGC*RELFHT
Trigger: TGTGTGAAACAACTCTCTTCAACATCCACTGGGTTT...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTAAACCCAGTGGATGTTaGAGAGAGTTGTTTCACACA +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPKPSGC*RELFHT
Trigger: TGTGTGAAACAACTCTCTTCAACATCCACTGGGTTT...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTGTGGCCGGCTTTTCCTaGGCCGGTAACAGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: LSDFHQACLSNYPILVPVVAGFS*AGNSQG
Trigger: GCCTTGACTGTTACCGGCTCAGGAAAAGCCGGCCAC...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGATTTGTTCTGTCGACTaGTACAAGGGCAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMICSVD*YKGSLL
Trigger: AAGCAAACTGCCCTTGTATCAGTCGACAGAACAAAT...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GTTTCGTTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCAGTGACATCCCATTGGTaGCGGCAGGTCTCAATACAG +
Preference number: 4 (lower is better)
Translates to: VSFPEEALGFMLGSCDIPVTSHW*RQVSIQ
Trigger: CTGTATTGAGACCTGCCGTCACCAATGGGATGTCAC...TGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAACGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp GCCAGGATGTATTTTGAGGTCTCTAGATCTATCCCTTCTGCTAGGGAGGAAGAGTATGCTAGGAAGCTGTaGCATCCCATTGGTGACGGC +
Preference number: 4 (lower is better)
Translates to: ARMYFEVSRSIPSAREEEYARKL*HPIGDG
Trigger: GCCGTCACCAATGGGATGTCACAGCTTCCTAGCATA...CTCTTCCTCCCTAGCAGAAGGGATAGATCTAGAGACCTCAAAATACATCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCACAGGGCAAGGAGGCCTaGTGGCTTTCAGTTCACTAT +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPQGKEA*WLSVHY
Trigger: ATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTG...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAAATGAGACTCTTTATTaGGCACCGACCTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPNETLY*APTSGT
Trigger: GGTCCCTGAGGTCGGTGCTCAATAAAGAGTCTCATT...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATGTGTCCAAGGGGGTTTaGGGAAGTTTTCCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: SWRDIHFPMYLWANESHHVSKGV*GSFPGP
Trigger: CGGGCCGGGAAAACTTCCTCAAACCCCCTTGGACAC...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGCTTATTTTCTACCACTaGGGCAATGATGTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMLIFYH*GNDVVK
Trigger: CTTGACCACATCATTGCCTCAGTGGTAGAAAATAAG...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGTCACAAAGCCAGGAGTaGGAAGTATGGGGATCTAGC +
Preference number: 4 (lower is better)
Translates to: STTFLCQPSVLRQRRREWSQSQE*EVWGSS
Trigger: GCTAGATCCCCATACTTCTCACTCCTGGCTTTGTGA...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TTCTGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTAAGTACCTCTTCATCATaGGCACCCTCCCCGATGGGA +
Preference number: 4 (lower is better)
Translates to: FWVSVKLQARFEASEVFLSTSSS*APSPMG
Trigger: TCCCATCGGGGAGGGTGCTCATGATGAAGAGGTACT...TAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp TGGGACTGTCCCTTTGCACACTTCAACCAGGAGAAAACTTCTTCATCACCCATCGGGCTCCAGCAGGTATaGAAACAGCATCACCTAGGA +
Preference number: 4 (lower is better)
Translates to: WDCPFAHFNQEKTSSSPIGLQQV*KQHHLG
Trigger: TCCTAGGTGATGCTGTTTTCATACCTGCTGGAGCCC...GATGGGTGATGAAGAAGTTTTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATGGATTCATGAGCCTTaGGGGTGCCAACCGCATCTT +
Preference number: 4 (lower is better)
Translates to: ISNQENVQESPAMFRQFGWIHEP*GCQPHL
Trigger: AAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCA...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACGTCAACCTTCAGTGTTaGGGCAGCGTAGAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHVNLQC*GSVEES
Trigger: ACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGAC...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGGTCAACCTTCAGTGTTaGGGCAGCGTAGAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: STTFLCQPSVLRQRRREWVNLQC*GSVEES
Trigger: ACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGAC...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACGTCTTAGCCTGCAGCTaGTCCTCAGAGTCACTCAAA +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHVLACS*SSESLK
Trigger: TTTGAGTGACTCTGAGGAGCAGCTGCAGGCTAAGAC...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAGTCTTAGCCTGCAGCTaGTCCTCAGAGTCACTCAAA +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCEVLACS*SSESLK
Trigger: TTTGAGTGACTCTGAGGAGCAGCTGCAGGCTAAGAC...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATCGGCCCTTGGGGGCCTaGTTCCCTTTGCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYRPLGA*FPLLLP
Trigger: GGGCAAAAGCAAAGGGAAGCAGGCCCCCAAGGGCCG...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp TCCACCATCATCATGGCCTCCTTCTCAGACATTACGAGCTGGCAGAACTGGTCCAAGGGCTCTCCAGATTaGTTCAGCTTCTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: STIIMASFSDITSWQNWSKGSPD*FSFFTL
Trigger: CAAAGTGAAGAAGCTGAAGCAATCTGGAGAGCCCTT...GGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCATGATGATGGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAGCATCAGGGTCACTTTaGTGGGGGCTTAAAAACCCC +
Preference number: 4 (lower is better)
Translates to: ISNQENVQESPAMFRQFGASGSL*WGLKNP
Trigger: GGGGTTTTTAAGCCCCCAGCAAAGTGACCCTGATGC...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCCACAGCTCGCTTCCATaGCACTTTCTGGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTHSSLP*HFLVWL
Trigger: GAGCCACACCAGAAAGTGGCATGGAAGCGAGCTGTG...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp CAGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACACAGCTCGCTTCCATaGCACTTTCTGGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: QTVKKLWSQRRDLCSGVEHSSLP*HFLVWL
Trigger: GAGCCACACCAGAAAGTGGCATGGAAGCGAGCTGTG...TTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCACCGGGGGAAAGGGTATaGCTGTGTCCAAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSPGERV*LCPRGF
Trigger: AAACCCCCTTGGACACAGGCATACCCTTTCCCCCGG...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTTCCAATTGTTTTTGTTaGTGGGGTCATGGAGACACA +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPSNCFC*WGHGDT
Trigger: TGTGTCTCCATGACCCCAGCAACAAAAACAATTGGA...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACTTGAGCACCATTGGCTaGCCATCTTCTGACCGTAGT +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHLSTIG*PSSDRS
Trigger: ACTACGGTCAGAAGATGGGCAGCCAATGGTGCTCAA...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGTTGAGCACCATTGGCTaGCCATCTTCTGACCGTAGT +
Preference number: 4 (lower is better)
Translates to: STTFLCQPSVLRQRRREWLSTIG*PSSDRS
Trigger: ACTACGGTCAGAAGATGGGCAGCCAATGGTGCTCAA...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGCTCCCGGATCTTCTCTaGATCCTTGGCTGCATAGAT +
Preference number: 4 (lower is better)
Translates to: STTFLCQPSVLRQRRREWLPDLL*ILGCID
Trigger: ATCTATGCAGCCAAGGATGCAGAGAAGATCCGGGAG...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACGACAAATGTAGACGGTaGCTGCTTGGCTCTCTGATC +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHDKCRR*LLGSLI
Trigger: GATCAGAGAGCCAAGCAGCCACCGTCTACATTTGTC...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS-3UTR CCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCGGTCACTGTTGGTGCTaGAGTCCGAGTCTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFGHCWC*SPSLVC
Trigger: GCAGACAAGACTCGGACTCCAGCACCAACAGTGACC...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp ACAGAGGAGCTTGGAGTTTCTCCATGCCTAGGACCTTGCCAGTTTGGATTCATGTCAGACATTACGAGCTaGCAGAACTGGTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: TEELGVSPCLGPCQFGFMSDITS*QNWSPT
Trigger: TGTTGGGGACCAGTTCTGCCAGCTCGTAATGTCTGA...CATGAATCCAAACTGGCAAGGTCCTAGGCATGGAGAAACTCCAAGCTCCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACTTCCATGCCACTTTCTaGTGTGGCTCCACCATCATC +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHFHATF*CGSTII
Trigger: GATGATGGTGGAGCCACACCAGAAAGTGGCATGGAA...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAAGATTCTCTGGTTCGTaGGACTGTCCCTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPRFSGS*DCPFAH
Trigger: GTGTGCAAAGGGACAGTCCCACGAACCAGAGAATCT...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TGGGACTGTCCCTTTGCACACTTCAACCAGGAGAAAACTTCTTCATCACCCATCGGGCATGAGATTCTCTaGTTCGTGGGACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: WDCPFAHFNQEKTSSSPIGHEIL*FVGLSL
Trigger: AAGGGACAGTCCCACGAACCAGAGAATCTCATGCCC...GATGGGTGATGAAGAAGTTTTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp TGGGACTGTCCCTTTGCACACTTCAACCAGGAGAAAACTTCTTCATCACCCATCTGTTGTTGGAGGCAGTaGGACCCAGCAACAGACTGT +
Preference number: 4 (lower is better)
Translates to: WDCPFAHFNQEKTSSSPICCWRQ*DPATDC
Trigger: ACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACA...GATGGGTGATGAAGAAGTTTTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAGAAAGTTGGGTAGGCTaGCCTTGCTCTTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPESWVG*PCSSLL
Trigger: CAGGAGTGAAGAGCAAGGCCAGCCTACCCAACTTTC...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GCCATACTCCTCATAGAGTCGCTTACGGAGGGTCTGGTCCAGGTACCAACTTTGACTGAGGCAATGATGTaGTCAAGAAAGTTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: AILLIESLTEGLVQVPTLTEAMM*SRKLGR
Trigger: CCTACCCAACTTTCTTGACCACATCATTGCCTCAGT...CAAAGTTGGTACCTGGACCAGACCCTCCGTAAGCGACTCTATGAGGAGTATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCCCCCGAAACCAGCACTaGCTGACCTTGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFPRNQH*LTLLPT
Trigger: TGTTGGAAGCAAGGTCAGCCAGTGCTGGTTTCGGGG...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAACTGGCTAAAGGCTTCTaGCTTCCAGAGCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCELAKGF*LPELRL
Trigger: AAGTCTGAGCTCTGGAAGCCAGAAGCCTTTAGCCAG...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CTAGGACCTTGCCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTTTGGTCTCCAAATTCCTaGCTAAAGGCTTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LGPCQFGFMSLEGANRIFWSPNS*LKASGF
Trigger: GAAGCCAGAAGCCTTTAGCCAGGAATTTGGAGACCA...AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTATCTTCAAACCTGGTTaGCATCATGTCTCGAAAATC +
Preference number: 4 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAIFKPG*HHVSKI
Trigger: GATTTTCGAGACATGATGCCAACCAGGTTTGAAGAT...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTGAGCACCCTCCCCGATaGGAATCCCAACATACACCA +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFEHPPR*ESQHTP
Trigger: TGGTGTATGTTGGGATTCCCATCGGGGAGGGTGCTC...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACCGCTTACGGAGGGTCTaGTCCAGGTACCAACTTTGG +
Preference number: 4 (lower is better)
Translates to: RLLKSFGVSGETFAVELNRLRRV*SRYQLW
Trigger: CCAAAGTTGGTACCTGGACCAGACCCTCCGTAAGCG...GTTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCCGCTTACGGAGGGTCTaGTCCAGGTACCAACTTTGG +
Preference number: 4 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFRLRRV*SRYQLW
Trigger: CCAAAGTTGGTACCTGGACCAGACCCTCCGTAAGCG...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACATTGTGAACCTGGTGTaGGGCTCCAGCAGGTATGAA +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHIVNLV*GSSRYE
Trigger: TTCATACCTGCTGGAGCCCCACACCAGGTTCACAAT...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGCTTCACAGAGGAGCTTaGAGTTTCTCCATGCCTAGG +
Preference number: 4 (lower is better)
Translates to: STTFLCQPSVLRQRRREWLHRGA*SFSMPR
Trigger: CCTAGGCATGGAGAAACTCCAAGCTCCTCTGTGAAG...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACTTCACAGAGGAGCTTaGAGTTTCTCCATGCCTAGG +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPLHRGA*SFSMPR
Trigger: CCTAGGCATGGAGAAACTCCAAGCTCCTCTGTGAAG...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGCTTCACAGAGGAGCTTaGAGTTTCTCCATGCCTAGG +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQLHRGA*SFSMPR
Trigger: CCTAGGCATGGAGAAACTCCAAGCTCCTCTGTGAAG...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGGTGGCACTCTTGGCTTaGAGTCTCAAACTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQVALLA*SLKLCV
Trigger: CACACACAGTTTGAGACTCCAAGCCAAGAGTGCCAC...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAGGGATGTGGCACTCTTaGCTTGGAGTCTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCEGMWHS*LGVSNC
Trigger: ACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCC...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TCTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACGGTGAAAATGGTTCCTaGAGTCACCAGTGTTGTACA +
Preference number: 4 (lower is better)
Translates to: SDVSAVGFGNMVRLWSCYGENGS*SHQCCT
Trigger: TGTACAACACTGGTGACTCCAGGAACCATTTTCACC...GTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTGGTGAAAATGGTTCCTaGAGTCACCAGTGTTGTACA +
Preference number: 4 (lower is better)
Translates to: RCARESQIRRMCRKAPPCGENGS*SHQCCT
Trigger: TGTACAACACTGGTGACTCCAGGAACCATTTTCACC...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGTTTCCAATGTACCTATaGGCCAATGAATCCCACCAT +
Preference number: 4 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMFPMYL*ANESHH
Trigger: ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAA...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR CAA 72 bp TTTTCTACCACTGAGGCAATGATGTGGTCAAGAAAGTaGGGTAGGCTGGCCTTGCTCTTCACTCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: FSTTEAMMWSRK*GRLALLFTPAE
Trigger: CTCAGCAGGAGTGAAGAGCAAGGCCAGCCTACCCAACTTTCTTGACCACATCATTGCCTCAGTGGTAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CAA 72 bp TGCTTCCAACACTCCCGGAAGATCTTCCAATTGTTTTaGTTGCTGGGGTCATGGAGACACAGAAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: CFQHSRKIFQLF*LLGSWRHRSLP
Trigger: TGGGAGGCTTCTGTGTCTCCATGACCCCAGCAACAAAAACAATTGGAAGATCTTCCGGGAGTGTTGGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp TTTCAGAGGCTCTTCAGATCTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCTGGGATCTACCGACTTaGTCTCACCACTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: FQRLFRSDVSAVGFGNMVWDLPT*SHHSQL
Trigger: TAACTGAGAGTGGTGAGATCAAGTCGGTAGATCCCA...GACCATGTTCCCAAAGCCGACAGCACTGACATCAGATCTGAAGAGCCTCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCACTCGCTTTGAGGCGCTaGATTATCCATCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPLALRR*IIHQHH
Trigger: GTGATGCTGATGGATAATTCAGCGCCTCAAAGCGAG...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAAGAAGAGGAGCTACCTaGTGCCTGAGATGCAAAACT +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPRRGAT*CLRCKT
Trigger: AGTTTTGCATCTCAGGCATCAGGTAGCTCCTCTTCT...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGAGAAGAGGAGCTACCTaGTGCCTGAGATGCAAAACT +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQRRGAT*CLRCKT
Trigger: AGTTTTGCATCTCAGGCATCAGGTAGCTCCTCTTCT...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAAGAGTCACTCAAATCTaGCAGGTCACTGTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCERVTQI*QVTVGA
Trigger: AGCACCAACAGTGACCTGTCAGATTTGAGTGACTCT...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAATCAACCTCCGGAAGTaGAAGAAACGGCAGGCTACA +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPINLRK*KKRQAT
Trigger: TGTAGCCTGCCGTTTCTTTCACTTCCGGAGGTTGAT...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp AGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACTATGCTAGGAAGCTGTaGCATCCCATTGGTGACGGC +
Preference number: 4 (lower is better)
Translates to: RLLKSFGVSGETFAVELNYARKL*HPIGDG
Trigger: GCCGTCACCAATGGGATGTCACAGCTTCCTAGCATA...GTTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTGAGGCTCTTCAGATCTaGTGTCAGTGCTGTCGGCTT +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFEALQI*CQCCRL
Trigger: AAGCCGACAGCACTGACATCAGATCTGAAGAGCCTC...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCAGGGCAAGGAGGCCTaGTGGCTTTCAGTTCACTAT +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFQGKEA*WLSVHY
Trigger: ATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTG...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp CTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTTCTTCTTTAGCCTTCTaGGTTGCTAAATCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: LMSVLSALGTWSGSGVVTSSLAF*VAKSAN
Trigger: GTTGGCAGATTTAGCAACTCAGAAGGCTAAAGAAGA...AGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAAATGAGACTCTTTATTaGGCACCGACCTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: ISNQENVQESPAMFRQFGNETLY*APTSGT
Trigger: GGTCCCTGAGGTCGGTGCTCAATAAAGAGTCTCATT...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAAGCCCAAAGGGTGAATaGGACTCTTTATTGAGCACC +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCESPKGE*DSLLST
Trigger: GGTGCTCAATAAAGAGTCTCATTCACCCTTTGGGCT...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACAGCCCAAAGGGTGAATaGGACTCTTTATTGAGCACC +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHSPKGE*DSLLST
Trigger: GGTGCTCAATAAAGAGTCTCATTCACCCTTTGGGCT...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACGTCCAGCCCAAAGGGTaGATGAGACTCTTTATTGAG +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHVQPKG*MRLFIE
Trigger: CTCAATAAAGAGTCTCATTCACCCTTTGGGCTGGAC...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGGTCCAGCCCAAAGGGTaGATGAGACTCTTTATTGAG +
Preference number: 4 (lower is better)
Translates to: STTFLCQPSVLRQRRREWVQPKG*MRLFIE
Trigger: CTCAATAAAGAGTCTCATTCACCCTTTGGGCTGGAC...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAGTCCAGCCCAAAGGGTaGATGAGACTCTTTATTGAG +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPVQPKG*MRLFIE
Trigger: CTCAATAAAGAGTCTCATTCACCCTTTGGGCTGGAC...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp CTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGATTTTTCCCGGCCCGGAGTaGAGGAGGTCTCGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: LPPGMFKQLPHTCTSYVIFPGPE*RRSRRL
Trigger: TAGCCTTCGAGACCTCCTTCACTCCGGGCCGGGAAA...AATCACATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGCTACCACTGAGGCAATaGTGTGGTCAAGAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQLPLRQ*CGQESW
Trigger: CCAACTTTCTTGACCACATCATTGCCTCAGTGGTAG...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTTGGATTCATGAGCCTTaGGGGTGCCAACCGCATCTT +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFWIHEP*GCQPHL
Trigger: AAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCA...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTGTACCTATGGGCCAATaGATCCCACCATTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: RCARESQIRRMCRKAPPCVPMGQ*IPPFSN
Trigger: ATTTGAAAATGGTGGGATTCATTGGCCCATAGGTAC...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCAATGGAGACTCGAATaGCCTGGAGAAGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFQWRLE*PGEGLG
Trigger: ACCCAGTCCTTCTCCAGGGCATTCGAGTCTCCATTG...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp TCCACCAGAGAAGGTAGTTTCGTTTCCAGAAGAGGCACTAGGGTTTATGCTAGGGCACCACCAGAGTCCTaGCGTTTTCTTTGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: STREGSFVSRRGTRVYARAPPES*RFLWCK
Trigger: CTTACACCAAAGAAAACGGCAGGACTCTGGTGGTGC...CCTAGCATAAACCCTAGTGCCTCTTCTGGAAACGAAACTACCTTCTCTGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR GCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACAGTCCGAGTCTTGTCTaGAAGCCAAGCTTCGTTCAT +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHSPSLV*KPSFVH
Trigger: ATGAACGAAGCTTGGCTTGCAGACAAGACTCGGACT...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTAGCTTCCCCATCAGGTaGTCTGGAATTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFSFPIR*SGIPFR
Trigger: CCTGAAGGGAATTCCAGAGCACCTGATGGGGAAGCT...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp CAGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAAGCATCAGGGTCACTTTaGTGGGGGCTTAAAAACCCC +
Preference number: 4 (lower is better)
Translates to: QTVKKLWSQRRDLCSGVEASGSL*WGLKNP
Trigger: GGGGTTTTTAAGCCCCCAGCAAAGTGACCCTGATGC...TTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAGTGGGACTGTCCCTTTaGACACTTCAACCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ISNQENVQESPAMFRQFGVGLSL*TLQPGE
Trigger: TTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCAC...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAGTGGGACTGTCCCTTTaGACACTTCAACCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPVGLSL*TLQPGE
Trigger: TTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCAC...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp CTAGGACCTTGCCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTTCGACCTCAGGGACCCTaGTTCTTTTGTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LGPCQFGFMSLEGANRIFRPQGP*FFCFFF
Trigger: AAAGAAGAAACAAAAGAAGCAGGGTCCCTGAGGTCG...AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATCCGGGGGAAAGGGTATaGCTGTGTCCAAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: SWRDIHFPMYLWANESHHPGERV*LCPRGF
Trigger: AAACCCCCTTGGACACAGGCATACCCTTTCCCCCGG...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp TCCACCAGAGAAGGTAGTTTCGTTTCCAGAAGAGGCACTAGGGTTTATGCTAGGGGGTATCAGTCAAGTTaGAGGCCCGCTTTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: STREGSFVSRRGTRVYARGYQSS*RPALKH
Trigger: ATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCC...CCTAGCATAAACCCTAGTGCCTCTTCTGGAAACGAAACTACCTTCTCTGGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGTCCAATTGTTTTTGTTaGTGGGGTCATGGAGACACA +
Preference number: 4 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQSNCFC*WGHGDT
Trigger: TGTGTCTCCATGACCCCAGCAACAAAAACAATTGGA...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp GTTTCGTTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCATTGAGCACCATTGGCTaGCCATCTTCTGACCGTAGT +
Preference number: 4 (lower is better)
Translates to: VSFPEEALGFMLGSCDIPLSTIG*PSSDRS
Trigger: ACTACGGTCAGAAGATGGGCAGCCAATGGTGCTCAA...TGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAACGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp CTTCCCCATCAGGTGCTCTGGAATTCCCTTCAGGCCTGTCTTAGCCTGCAGCTGAACCGCATCTTTCACTaGATGGTAAATGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: LPHQVLWNSLQACLSLQLNRIFH*MVNDVL
Trigger: AAGAACATCATTTACCATGCAGTGAAAGATGCGGTT...CAGCTGCAGGCTAAGACAGGCCTGAAGGGAATTCCAGAGCACCTGATGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR GCA 90 bp GGAAGATCTTCCAATTGTTTTTGTTGCTGGGGTCATGGAGACACAGAAGCCTCCCCATGCCTAGGACCTTaGCAGTTTGGATTCATGAGC +
Preference number: 4 (lower is better)
Translates to: GRSSNCFCCWGHGDTEASPCLGP*QFGFMS
Trigger: GCTCATGAATCCAAACTGGCAAGGTCCTAGGCATGG...GGAGGCTTCTGTGTCTCCATGACCCCAGCAACAAAAACAATTGGAAGATCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGCTTGGAGTTTCTCCATaGCTAGGACCTTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQLGVSP*LGPCQF
Trigger: AAACTGGCAAGGTCCTAGGCATGGAGAAACTCCAAG...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATCCAGCAAAGAGCCCTaGCGTTCCCTGTTAAGTGTT +
Preference number: 4 (lower is better)
Translates to: ISNQENVQESPAMFRQFGSSKEP*RSLLSV
Trigger: AACACTTAACAGGGAACGGCAGGGCTCTTTGCTGGA...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp TTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCATTGGTGTCCAGCAAAGAGCCCTaGCGTTCCCTGTTAAGTGTT +
Preference number: 4 (lower is better)
Translates to: FPEEALGFMLGSCDIPLVSSKEP*RSLLSV
Trigger: AACACTTAACAGGGAACGGCAGGGCTCTTTGCTGGA...CACCAATGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCAGAGACTCGAATGCCCTaGAGAAGGACTGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSETRMP*RRTGSS
Trigger: TGAGGACCCAGTCCTTCTCCAGGGCATTCGAGTCTC...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAGAAGCCACTATGCCCTaGCCAACTTGTTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPEATMP*PTCSSV
Trigger: AACACTGGAACAAGTTGGCCAGGGCATAGTGGCTTC...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp CACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAGTCTACATCCTGGTCGCCAGCCTTAGAGCCTaGCTTAGTGTCTGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: HIGNYSTVPAVHQVYILVASLRA*LSVCSK
Trigger: CTTGGAACAGACACTAAGCCAGGCTCTAAGGCTGGC...GACCAGGATGTAGACTTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGCTTCTCGGGACAATTTaGGGGGCTGTAAAAATAGAT +
Preference number: 4 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQLLGTI*GAVKID
Trigger: ATCTATTTTTACAGCCCCCCAAATTGTCCCGAGAAG...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp ACAGAGGAGCTTGGAGTTTCTCCATGCCTAGGACCTTGCCAGTTTGGATTCATGACTGGTCCCCAACATTaGCCAGGATGTATTTTGAGG +
Preference number: 4 (lower is better)
Translates to: TEELGVSPCLGPCQFGFMTGPQH*PGCILR
Trigger: CCTCAAAATACATCCTGGCCAATGTTGGGGACCAGT...CATGAATCCAAACTGGCAAGGTCCTAGGCATGGAGAAACTCCAAGCTCCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTGGGCATGAGATTCTCTaGTTCGTGGGACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFGHEIL*FVGLSL
Trigger: AAGGGACAGTCCCACGAACCAGAGAATCTCATGCCC...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGCAGTGCTGTCGGCTTTaGGAACATGGTCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMQCCRL*EHGPAL
Trigger: CAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTG...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CAGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACTTCGGTTTTGTTGTTaGAGGCAGTGGGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: QTVKKLWSQRRDLCSGVELRFCC*RQWDPA
Trigger: TGCTGGGTCCCACTGCCTCCAACAACAAAACCGAAG...TTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATGTGGTCAAGAAAGTTaGGTAGGCTGGCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ISNQENVQESPAMFRQFGCGQES*VGWPCS
Trigger: AGAGCAAGGCCAGCCTACCCAACTTTCTTGACCACA...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGTGGTCTCCAAATTCCTaGCTAAAGGCTTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQWSPNS*LKASGF
Trigger: GAAGCCAGAAGCCTTTAGCCAGGAATTTGGAGACCA...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TCCACCATCATCATGGCCTCCTTCTCAGACATTACGAGCTGGCAGAACTGGTCCTCAGATCTTCAAACCTaGTTGGCATCATGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: STIIMASFSDITSWQNWSSDLQT*LASCLE
Trigger: TTCGAGACATGATGCCAACCAGGTTTGAAGATCTGA...GGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCATGATGATGGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGGCCTGCCATCTCGTTTaGTATATTCTGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQACHLV*YILAEE
Trigger: TTCCTCTGCCAGAATATACCAAACGAGATGGCAGGC...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTGTGCTTTACATGTTCTaGAGATACAAAGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RVAGEFGILTTLALGEGPVLYMF*RYKVFC
Trigger: GCAGAAGACTTTGTATCTCCAGAACATGTAAAGCAC...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACAGCGTAGAAGAGAGTaGCTGGAGAGTTTGGAATAC +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPQRRRE*LESLEY
Trigger: GTATTCCAAACTCTCCAGCCACTCTCTTCTACGCTG...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAGGGATGTGGCACTCTTaGCTTGGAGTCTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: ISNQENVQESPAMFRQFGGMWHS*LGVSNC
Trigger: ACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCC...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CAGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACACAGGATAGGGATGTaGCACTCTTGGCTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: QTVKKLWSQRRDLCSGVEHRIGM*HSWLGV
Trigger: GACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG...TTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp TCCACCATCATCATGGCCTCCTTCTCAGACATTACGAGCTGGCAGAACTGGTCCCATGTTCAGGCAATTTaGATTTCCAAAAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: STIIMASFSDITSWQNWSHVQAI*ISKRPQ
Trigger: CTGTGGCCTTTTGGAAATCCAAATTGCCTGAACATG...GGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCATGATGATGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAATCCTGGAGCCTCCTaGGAAAAGCAGTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTNPGAS*EKQWVL
Trigger: GAGAACCCACTGCTTTTCCCAGGAGGCTCCAGGATT...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR CAA 72 bp TTCCAACACTCCCGGAAGATCTTCCAATTGTTTTTGTaGCTGGGGTCATGGAGACACAGAAGCCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: FQHSRKIFQLFL*LGSWRHRSLPS
Trigger: TGATGGGAGGCTTCTGTGTCTCCATGACCCCAGCAACAAAAACAATTGGAAGATCTTCCGGGAGTGTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAGAGTCACTCAAATCTaGCAGGTCACTGTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPRVTQI*QVTVGA
Trigger: AGCACCAACAGTGACCTGTCAGATTTGAGTGACTCT...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGCCACATTGATGCATaGCCCATCCTGCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMCHIDA*PILQEG
Trigger: CCCTTCCTGCAGGATGGGTCATGCATCAATGTGGCA...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCGACACTTGTGCAGATaGGGTGCCACATTGATGCAT +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFRHLCR*GATLMH
Trigger: ATGCATCAATGTGGCACCTCATCTGCACAAGTGTCG...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp CAGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACGACACTTGTGCAGATaGGGTGCCACATTGATGCAT +
Preference number: 4 (lower is better)
Translates to: QTVKKLWSQRRDLCSGVERHLCR*GATLMH
Trigger: ATGCATCAATGTGGCACCTCATCTGCACAAGTGTCG...TTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp TTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCATTGGTGGTCCAGCCCAAAGGGTaGATGAGACTCTTTATTGAG +
Preference number: 4 (lower is better)
Translates to: FPEEALGFMLGSCDIPLVVQPKG*MRLFIE
Trigger: CTCAATAAAGAGTCTCATTCACCCTTTGGGCTGGAC...CACCAATGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp GAAATCCCGAACTTTCACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAGCTCTTCACTCCTGCTaGGGATGTAGAGAAGACCGG +
Preference number: 4 (lower is better)
Translates to: EIPNFHIGNYSTVPAVHQALHSC*GCREDR
Trigger: CCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGC...TTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTGAAAGTTCGGGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCACTACCACTGAGGCAATaGTGTGGTCAAGAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPLPLRQ*CGQESW
Trigger: CCAACTTTCTTGACCACATCATTGCCTCAGTGGTAG...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp CAGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAATCACAAAGCCAGGAGTaGGAAGTATGGGGATCTAGC +
Preference number: 4 (lower is better)
Translates to: QTVKKLWSQRRDLCSGVESQSQE*EVWGSS
Trigger: GCTAGATCCCCATACTTCTCACTCCTGGCTTTGTGA...TTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGCCTCGTCAATTGTCTTaGGTACCTCTTCATCATGAG +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQPRQLS*VPLHHE
Trigger: CTCATGATGAAGAGGTACTCAAGACAATTGACGAGG...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGTTCTCTTTTCCATCATaGATCCTCTGCTTCGTCACC +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQFSFPS*ILCFVT
Trigger: GGTGACGAAGCAGAGGATTCATGATGGAAAAGAGAA...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCAACTGTATAGATTGTaGACCTGGTGTGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFQLYRL*TWCGAP
Trigger: TGGAGCCCCACACCAGGTTCACAATCTATACAGTTG...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTATTTAGATGCCTGAATTCCTaGGTCAGGCGGAAACAGTGC +
Preference number: 4 (lower is better)
Translates to: WVSVKLQARFEASEVFLFRCLNS*VRRKQC
Trigger: GCACTGTTTCCGCCTGACTCAGGAATTCAGGCATCT...AAATAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTGCCAGTTTGGATTCATaGGCCTTGAGGGTGCCAACC +
Preference number: 4 (lower is better)
Translates to: LSDFHQACLSNYPILVPVASLDS*ALRVPT
Trigger: GGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGC...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTGCCAGTTTGGATTCATaGGCCTTGAGGGTGCCAACC +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTIASLDS*ALRVPT
Trigger: GGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGC...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAAGAAAGGTGTGCCCGTaGATCTCAAATCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCERKVCP*ISNQEN
Trigger: ATTCTCCTGATTTGAGATTCACGGGCACACCTTTCT...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGAGAAAGGTGTGCCCGTaGATCTCAAATCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: STTFLCQPSVLRQRRREWRKVCP*ISNQEN
Trigger: ATTCTCCTGATTTGAGATTCACGGGCACACCTTTCT...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGTTTACCCAGGAGTGTTaGTTCCAGTTACAGCCATCA +
Preference number: 4 (lower is better)
Translates to: STTFLCQPSVLRQRRREWFTQEC*FQLQPS
Trigger: TGATGGCTGTAACTGGAAGCAACACTCCTGGGTAAA...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCATGGCAAAGCGAATGTTaGGGTTTATCTGGGGGACAA +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPWQSEC*GLSGGQ
Trigger: TTGTCCCCCAGATAAACCGCAACATTCGCTTTGCCA...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS-3UTR GCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGCTGCGGAAGCCACTATaGCCTGGCCAACTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMLRKPL*PGQLVP
Trigger: TGGAACAAGTTGGCCAGGGCATAGTGGCTTCCGCAG...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCATTTCTGTGCCTCTTGTaGAGAGCTACAGCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPFLCLL*RATAKR
Trigger: TCTTTTGGCTGTAGCTCTGCACAAGAGGCACAGAAA...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp TTCTGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTAGTGGGACTGTCCCTTTaGACACTTCAACCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: FWVSVKLQARFEASEVFLVGLSL*TLQPGE
Trigger: TTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCAC...TAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGGATACAAGGGCAGTTTaGTTTAATTCCCCACTTGCC +
Preference number: 4 (lower is better)
Translates to: STTFLCQPSVLRQRRREWDTRAV*FNSPLA
Trigger: GGCAAGTGGGGAATTAAAGCAAACTGCCCTTGTATC...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAGATACAAGGGCAGTTTaGTTTAATTCCCCACTTGCC +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCEDTRAV*FNSPLA
Trigger: GGCAAGTGGGGAATTAAAGCAAACTGCCCTTGTATC...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGGAGTTGTTACTGGTaGCGGTCCTCCTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMWSCYW*RSSSTR
Trigger: TCTGGTGGAGGAGGACCGGCACCAGTAACAACTCCA...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCCCATGCCTAGGACCTTaGCAGTTTGGATTCATGAGC +
Preference number: 4 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFPCLGP*QFGFMS
Trigger: GCTCATGAATCCAAACTGGCAAGGTCCTAGGCATGG...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTTCAGACATTACGAGCTaGCAGAACTGGTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFSDITS*QNWSPT
Trigger: TGTTGGGGACCAGTTCTGCCAGCTCGTAATGTCTGA...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAGCTCCACCATCATCATaGCCTCCTTCTCAGACATTA +
Preference number: 4 (lower is better)
Translates to: ISNQENVQESPAMFRQFGAPPSS*PPSQTL
Trigger: TAATGTCTGAGAAGGAGGCCATGATGATGGTGGAGC...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCTTCCATGCCACTTTCTaGTGTGGCTCCACCATCATC +
Preference number: 4 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFFHATF*CGSTII
Trigger: GATGATGGTGGAGCCACACCAGAAAGTGGCATGGAA...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTTTCCATGCCACTTTCTaGTGTGGCTCCACCATCATC +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFFHATF*CGSTII
Trigger: GATGATGGTGGAGCCACACCAGAAAGTGGCATGGAA...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACTTCCATGCCACTTTCTaGTGTGGCTCCACCATCATC +
Preference number: 4 (lower is better)
Translates to: RLLKSFGVSGETFAVELNFHATF*CGSTII
Trigger: GATGATGGTGGAGCCACACCAGAAAGTGGCATGGAA...GTTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp TGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTATTTGGGCATGAGATTCTCTaGTTCGTGGGACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: WVSVKLQARFEASEVFLFGHEIL*FVGLSL
Trigger: AAGGGACAGTCCCACGAACCAGAGAATCTCATGCCC...AAATAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTAACATGGTCCGGCTCTaGAGTTGTTACTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTINMVRL*SCYWCR
Trigger: CCGGCACCAGTAACAACTCCAGAGCCGGACCATGTT...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTAACATGGTCCGGCTCTaGAGTTGTTACTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LSDFHQACLSNYPILVPVNMVRL*SCYWCR
Trigger: CCGGCACCAGTAACAACTCCAGAGCCGGACCATGTT...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCACTTCGGTTTTGTTGTTaGAGGCAGTGGGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSLRFCC*RQWDPA
Trigger: TGCTGGGTCCCACTGCCTCCAACAACAAAACCGAAG...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCAGAAAGTTGGGTAGGCTaGCCTTGCTCTTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSESWVG*PCSSLL
Trigger: CAGGAGTGAAGAGCAAGGCCAGCCTACCCAACTTTC...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTTGTGGTCAAGAAAGTTaGGTAGGCTGGCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFCGQES*VGWPCS
Trigger: AGAGCAAGGCCAGCCTACCCAACTTTCTTGACCACA...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCTGTGGTCAAGAAAGTTaGGTAGGCTGGCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTCGQES*VGWPCS
Trigger: AGAGCAAGGCCAGCCTACCCAACTTTCTTGACCACA...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAACTGAGGCAATGATGTaGTCAAGAAAGTTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCETEAMM*SRKLGR
Trigger: CCTACCCAACTTTCTTGACCACATCATTGCCTCAGT...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp ACAGAGGAGCTTGGAGTTTCTCCATGCCTAGGACCTTGCCAGTTTGGATTCATGACTGAGGCAATGATGTaGTCAAGAAAGTTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: TEELGVSPCLGPCQFGFMTEAMM*SRKLGR
Trigger: CCTACCCAACTTTCTTGACCACATCATTGCCTCAGT...CATGAATCCAAACTGGCAAGGTCCTAGGCATGGAGAAACTCCAAGCTCCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCATCCTTCACTTCCTTCTaGGTATCAGTCAAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPSFTSF*VSVKLQ
Trigger: CTGCAACTTGACTGATACCCAGAAGGAAGTGAAGGA...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGAATTGTTTTTGTTGCTaGGGTCATGGAGACACAGAA +
Preference number: 4 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQNCFCC*GHGDTE
Trigger: TTCTGTGTCTCCATGACCCCAGCAACAAAAACAATT...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTCCCCGAAACCAGCACTaGCTGACCTTGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: LSDFHQACLSNYPILVPVPRNQH*LTLLPT
Trigger: TGTTGGAAGCAAGGTCAGCCAGTGCTGGTTTCGGGG...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCCTGGCTAAAGGCTTCTaGCTTCCAGAGCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFLAKGF*LPELRL
Trigger: AAGTCTGAGCTCTGGAAGCCAGAAGCCTTTAGCCAG...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGACCAAGTCTACATCCTaGTCTCCAAATTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: STTFLCQPSVLRQRRREWTKSTS*SPNSWL
Trigger: TAGCCAGGAATTTGGAGACCAGGATGTAGACTTGGT...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAACCAAGTCTACATCCTaGTCTCCAAATTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPTKSTS*SPNSWL
Trigger: TAGCCAGGAATTTGGAGACCAGGATGTAGACTTGGT...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTATCTTCAAACCTGGTTaGCATCATGTCTCGAAAATC +
Preference number: 4 (lower is better)
Translates to: RCARESQIRRMCRKAPPCIFKPG*HHVSKI
Trigger: GATTTTCGAGACATGATGCCAACCAGGTTTGAAGAT...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATGAGCACCCTCCCCGATaGGAATCCCAACATACACCA +
Preference number: 4 (lower is better)
Translates to: SWRDIHFPMYLWANESHHEHPPR*ESQHTP
Trigger: TGGTGTATGTTGGGATTCCCATCGGGGAGGGTGCTC...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGCGCTTACGGAGGGTCTaGTCCAGGTACCAACTTTGG +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMRLRRV*SRYQLW
Trigger: CCAAAGTTGGTACCTGGACCAGACCCTCCGTAAGCG...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTCGCTTACGGAGGGTCTaGTCCAGGTACCAACTTTGG +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTIRLRRV*SRYQLW
Trigger: CCAAAGTTGGTACCTGGACCAGACCCTCCGTAAGCG...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAGTAGAAGAGAGTGGCTaGAGAGTTTGGAATACTGAC +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPVEESG*RVWNTD
Trigger: GTCAGTATTCCAAACTCTCCAGCCACTCTCTTCTAC...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATCTTCACCCCGTCTCCTaGGATGGGCTTTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYLHPVS*DGLCQR
Trigger: CCTCTGACAAAGCCCATCCCAGGAGACGGGGTGAAG...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACTGTTGTACACACACATaGGGAACACACCACAGCTTA +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHCCTHT*GTHHSL
Trigger: TAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACA...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGATAACTTCCTCAGCATaGACTTTTACCCAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQITSSA*TFTQEC
Trigger: ACACTCCTGGGTAAAAGTTCATGCTGAGGAAGTTAT...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCACTATCTGTTCCCATCTaGAACAGATGCAACCCATTG +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPLSVPI*NRCNPL
Trigger: CAATGGGTTGCATCTGTTTCAGATGGGAACAGATAG...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTAGTCAAAGGTTGCGATaGACTAGGGAGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTISQRLR*TRERCS
Trigger: GGAGCACCTCTCCCTAGTTCATCGCAACCTTTGACT...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACAAGGCTTTGTTTGAATaGGTCCCGACTAGAAGAATC +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHKALFE*VPTRRI
Trigger: GATTCTTCTAGTCGGGACTCATTCAAACAAAGCCTT...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGGATGAGGTGCCACATTaGTGCATGACCCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMDEVPH*CMTHPA
Trigger: TGCAGGATGGGTCATGCATCAATGTGGCACCTCATC...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTGTGACATCCCATTGGTaGCGGCAGGTCTCAATACAG +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTIVTSHW*RQVSIQ
Trigger: CTGTATTGAGACCTGCCGTCACCAATGGGATGTCAC...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCAAATGAGACTCTTTATTaGGCACCGACCTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSNETLY*APTSGT
Trigger: GGTCCCTGAGGTCGGTGCTCAATAAAGAGTCTCATT...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACAGCCCAAAGGGTGAATaGGACTCTTTATTGAGCACC +
Preference number: 4 (lower is better)
Translates to: RLLKSFGVSGETFAVELNSPKGE*DSLLST
Trigger: GGTGCTCAATAAAGAGTCTCATTCACCCTTTGGGCT...GTTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGCTCTTCACTCCTGCTaGGGATGTAGAGAAGACCGG +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYALHSC*GCREDR
Trigger: CCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGC...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TCCACCAGAGAAGGTAGTTTCGTTTCCAGAAGAGGCACTAGGGTTTATGCTAGGCCTCGTCAATTGTCTTaGGTACCTCTTCATCATGAG +
Preference number: 4 (lower is better)
Translates to: STREGSFVSRRGTRVYARPRQLS*VPLHHE
Trigger: CTCATGATGAAGAGGTACTCAAGACAATTGACGAGG...CCTAGCATAAACCCTAGTGCCTCTTCTGGAAACGAAACTACCTTCTCTGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGGGGCTCCAGCAGGTATaGAAACAGCATCACCTAGGA +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMGLQQV*KQHHLG
Trigger: TCCTAGGTGATGCTGTTTTCATACCTGCTGGAGCCC...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCACAACTGTATAGATTGTaGACCTGGTGTGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSQLYRL*TWCGAP
Trigger: TGGAGCCCCACACCAGGTTCACAATCTATACAGTTG...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GGTTTTGTTGTTGGAGGCAGTGGGACCCAGCAACAGACTGTTAAAAAGCTTTGGCTCAAACTGTGTGTGTaGACAGTACGACTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GFVVGGSGTQQQTVKKLWLKLCV*TVRLSC
Trigger: ACAGGAAAGTCGTACTGTTCACACACACAGTTTGAG...CCAAAGCTTTTTAACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp GCCAGGATGTATTTTGAGGTCTCTAGATCTATCCCTTCTGCTAGGGAGGAAGAGAGAAAGGTGTGCCCGTaGATCTCAAATCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: ARMYFEVSRSIPSAREEERKVCP*ISNQEN
Trigger: ATTCTCCTGATTTGAGATTCACGGGCACACCTTTCT...CTCTTCCTCCCTAGCAGAAGGGATAGATCTAGAGACCTCAAAATACATCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACAAGTTCCTTCTCATATaGCTGTTCCCTCAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHKFLLI*LFPQGK
Trigger: CTTACCTTGAGGGAACAGTCATATGAGAAGGAACTT...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGAACACTGGTAATAGGTaGAAATGGTTCCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: STTFLCQPSVLRQRRREWNTGNR*KWFLES
Trigger: TGACTCCAGGAACCATTTTCACCTATTACCAGTGTT...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATCTGCGGAAGCCACTATaGCCTGGCCAACTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYLRKPL*PGQLVP
Trigger: TGGAACAAGTTGGCCAGGGCATAGTGGCTTCCGCAG...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp GCCAGGATGTATTTTGAGGTCTCTAGATCTATCCCTTCTGCTAGGGAGGAAGAGCCAAAAGTCAAAGGTTaGGATGAACTAGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ARMYFEVSRSIPSAREEEPKVKG*DELGRG
Trigger: ACCTCTCCCTAGTTCATCGCAACCTTTGACTTTTGG...CTCTTCCTCCCTAGCAGAAGGGATAGATCTAGAGACCTCAAAATACATCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR GCA 90 bp GGAAGATCTTCCAATTGTTTTTGTTGCTGGGGTCATGGAGACACAGAAGCCTCCTTTCTGTGCCTCTTGTaGAGAGCTACAGCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: GRSSNCFCCWGHGDTEASFLCLL*RATAKR
Trigger: TCTTTTGGCTGTAGCTCTGCACAAGAGGCACAGAAA...GGAGGCTTCTGTGTCTCCATGACCCCAGCAACAAAAACAATTGGAAGATCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR GCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGGGCCTGCTTCCCTTTaGTTTTGCCCAGCAACAGCT +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYGPASL*FCPATA
Trigger: AGCTGTTGCTGGGCAAAAGCAAAGGGAAGCAGGCCC...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp CTAGGACCTTGCCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTTTCAGCTTCTTCACTTTaGTTACATCTTTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: LGPCQFGFMSLEGANRIFSASSL*LHLSAL
Trigger: CAGTGCTGAAAGATGTAAGCAAAGTGAAGAAGCTGA...AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp TTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCATTGGTGAAGGGCTCTCCAGATTaGTTCAGCTTCTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: FPEEALGFMLGSCDIPLVKGSPD*FSFFTL
Trigger: CAAAGTGAAGAAGCTGAAGCAATCTGGAGAGCCCTT...CACCAATGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTATGCATGACCCATCCTaGAGGAAGGGCTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTIMHDPS*RKGSPD
Trigger: ATCTGGAGAGCCCTTCCTGCAGGATGGGTCATGCAT...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp CTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGATTTGGAGTTGTTACTGGTaGCGGTCCTCCTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: LPPGMFKQLPHTCTSYVIWSCYW*RSSSTR
Trigger: TCTGGTGGAGGAGGACCGGCACCAGTAACAACTCCA...AATCACATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp GGTTTTGTTGTTGGAGGCAGTGGGACCCAGCAACAGACTGTTAAAAAGCTTTGGCGACCTCAGGGACCCTaGTTCTTTTGTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GFVVGGSGTQQQTVKKLWRPQGP*FFCFFF
Trigger: AAAGAAGAAACAAAAGAAGCAGGGTCCCTGAGGTCG...CCAAAGCTTTTTAACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAGTCAGGCGGAAACAGTaGTTTACATGTTCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: ISNQENVQESPAMFRQFGVRRKQ*FTCSGD
Trigger: ATCTCCAGAACATGTAAAGCACTGTTTCCGCCTGAC...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCACCATGCCTAGGACCTTaGCAGTTTGGATTCATGAGC +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSPCLGP*QFGFMS
Trigger: GCTCATGAATCCAAACTGGCAAGGTCCTAGGCATGG...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp TTCTGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTACTTGGAGTTTCTCCATaGCTAGGACCTTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: FWVSVKLQARFEASEVFLLGVSP*LGPCQF
Trigger: AAACTGGCAAGGTCCTAGGCATGGAGAAACTCCAAG...TAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCACAAATCAGGAGAATGTaGAGGAAAGCCCCGCCATGT +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSQIRRM*RKAPPC
Trigger: ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTG...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTTGGCAAAGCGAATGTTaGGGTTTATCTCCATCGCTC +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFWQSEC*GLSPSL
Trigger: GAGCGATGGAGATAAACCGCAACATTCGCTTTGCCA...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp GGTTTTGTTGTTGGAGGCAGTGGGACCCAGCAACAGACTGTTAAAAAGCTTTGGCAGAAGATATTCCACTaGAACCACAGAACCCAAACC +
Preference number: 4 (lower is better)
Translates to: GFVVGGSGTQQQTVKKLWQKIFH*NHRTQT
Trigger: GGTTTGGGTTCTGTGGTTCCAGTGGAATATCTTCTG...CCAAAGCTTTTTAACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACTTTCTTTGGTGTAAGTaGCAAAGCGAATGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHFLWCK*QSECCG
Trigger: ACCGCAACATTCGCTTTGCCACTTACACCAAAGAAA...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATCCTGCCGTTTTCTTTaGTGTAAGTGGCAAAGCGAA +
Preference number: 4 (lower is better)
Translates to: ISNQENVQESPAMFRQFGSCRFL*CKWQSE
Trigger: TTCGCTTTGCCACTTACACCAAAGAAAACGGCAGGA...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGATCCTCACTGTGTTTaGGGTGGAGCTGGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYDPHCV*GGAGGS
Trigger: ACTACCGCCAGCTCCACCCCAAACACAGTGAGGATC...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGCTTCTCGGGACAATTTaGGGGGCTGTAAAAATAGAT +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQLLGTI*GAVKID
Trigger: ATCTATTTTTACAGCCCCCCAAATTGTCCCGAGAAG...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCGCTCCACCATCATCATaGCCTCCTTCTCAGACATTA +
Preference number: 4 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTAPPSS*PPSQTL
Trigger: TAATGTCTGAGAAGGAGGCCATGATGATGGTGGAGC...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAGTCTACATCCTGGTCGCTCCACCATCATCATaGCCTCCTTCTCAGACATTA +
Preference number: 4 (lower is better)
Translates to: HIGNYSTVPAVHQVYILVAPPSS*PPSQTL
Trigger: TAATGTCTGAGAAGGAGGCCATGATGATGGTGGAGC...GACCAGGATGTAGACTTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTGCCACTTTCTGGTGTaGCTCCACCATCATCATGGC +
Preference number: 4 (lower is better)
Translates to: SWRDIHFPMYLWANESHHCHFLV*LHHHHG
Trigger: GCCATGATGATGGTGGAGCCACACCAGAAAGTGGCA...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAATTGCGACAAACCCAGTaGATGTTGAAGAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCELRQTQ*MLKRVV
Trigger: AACAACTCTCTTCAACATCCACTGGGTTTGTCGCAA...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGGGGCATGAGATTCTCTaGTTCGTGGGACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMGHEIL*FVGLSL
Trigger: AAGGGACAGTCCCACGAACCAGAGAATCTCATGCCC...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTCGGCTTTGGGAACATaGTCCGGCTCTGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: SWRDIHFPMYLWANESHHSALGT*SGSGVV
Trigger: AACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGA...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGACTGTTAAAAAGCTTTaGAGTCAGCGGAGAGACCTT +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQTVKKL*SQRRDL
Trigger: AAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGT...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GAAATCCCGAACTTTCACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAGAAAGTTGGGTAGGCTaGCCTTGCTCTTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: EIPNFHIGNYSTVPAVHQESWVG*PCSSLL
Trigger: CAGGAGTGAAGAGCAAGGCCAGCCTACCCAACTTTC...TTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTGAAAGTTCGGGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTTTGTTGCTGGGGTCATaGAGACACAGAAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTILLLGS*RHRSLP
Trigger: TGGGAGGCTTCTGTGTCTCCATGACCCCAGCAACAA...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTTGTTGCTGGGGTCATaGAGACACAGAAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SWRDIHFPMYLWANESHHLLLGS*RHRSLP
Trigger: TGGGAGGCTTCTGTGTCTCCATGACCCCAGCAACAA...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TCATCATGGCCTCCTTCTCAGACATTACGAGCTGGCAGAACTGGTCCCCAACATAATTGTTTTTGTTGCTaGGGTCATGGAGACACAGAA +
Preference number: 4 (lower is better)
Translates to: SSWPPSQTLRAGRTGPQHNCFCC*GHGDTE
Trigger: TTCTGTGTCTCCATGACCCCAGCAACAAAAACAATT...ATGTTGGGGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCATGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCACTGGCTAAAGGCTTCTaGCTTCCAGAGCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSLAKGF*LPELRL
Trigger: AAGTCTGAGCTCTGGAAGCCAGAAGCCTTTAGCCAG...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GCCAGGATGTATTTTGAGGTCTCTAGATCTATCCCTTCTGCTAGGGAGGAAGAGACCAAGTCTACATCCTaGTCTCCAAATTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: ARMYFEVSRSIPSAREEETKSTS*SPNSWL
Trigger: TAGCCAGGAATTTGGAGACCAGGATGTAGACTTGGT...CTCTTCCTCCCTAGCAGAAGGGATAGATCTAGAGACCTCAAAATACATCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACTCAGATCTTCAAACCTaGTTGGCATCATGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHSDLQT*LASCLE
Trigger: TTCGAGACATGATGCCAACCAGGTTTGAAGATCTGA...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTGCCTGCCATCTCGTTTaGTATATTCTGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFACHLV*YILAEE
Trigger: TTCCTCTGCCAGAATATACCAAACGAGATGGCAGGC...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACGCCTGCCATCTCGTTTaGTATATTCTGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: RLLKSFGVSGETFAVELNACHLV*YILAEE
Trigger: TTCCTCTGCCAGAATATACCAAACGAGATGGCAGGC...GTTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACCAGCGTAGAAGAGAGTaGCTGGAGAGTTTGGAATAC +
Preference number: 4 (lower is better)
Translates to: RLLKSFGVSGETFAVELNQRRRE*LESLEY
Trigger: GTATTCCAAACTCTCCAGCCACTCTCTTCTACGCTG...GTTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp TGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTATTTGTGGCACTCTTGGCTTaGAGTCTCAAACTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: WVSVKLQARFEASEVFLFVALLA*SLKLCV
Trigger: CACACACAGTTTGAGACTCCAAGCCAAGAGTGCCAC...AAATAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACCATGTTCAGGCAATTTaGATTTCCAAAAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHHVQAI*ISKRPQ
Trigger: CTGTGGCCTTTTGGAAATCCAAATTGCCTGAACATG...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GTTTCGTTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCATGTTGTACACACACATaGGGAACACACCACAGCTTA +
Preference number: 4 (lower is better)
Translates to: VSFPEEALGFMLGSCDIPCCTHT*GTHHSL
Trigger: TAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACA...TGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAACGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCATTTCCAATGTACCTATaGGCCAATGAATCCCACCAT +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPFPMYL*ANESHH
Trigger: ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAA...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR CAA 72 bp TCAGACATTACGAGCTGGCAGAACTGGTCCCCAACATaGGCCAGGATGTATTTTGAGGTCTCTAGATCTATC +
Preference number: 4 (lower is better)
Translates to: SDITSWQNWSPT*ARMYFEVSRSI
Trigger: GATAGATCTAGAGACCTCAAAATACATCCTGGCCAATGTTGGGGACCAGTTCTGCCAGCTCGTAATGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
3UTR CAA 72 bp ACCATCTCCTTCACTTCCTTCTGGGTATCAGTCAAGTaGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTA +
Preference number: 4 (lower is better)
Translates to: TISFTSFWVSVK*QARFEASEVFL
Trigger: TAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCAGAAGGAAGTGAAGGAGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp AGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACCAGAATAGAATTTCTTaGATTCTCTCCCGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RLLKSFGVSGETFAVELNQNRIS*ILSRGL
Trigger: CAGGCCTCGGGAGAGAATTCAAGAAATTCTATTCTG...GTTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAATCAGCCAAACTCTCTaGAACAGTAGTGAAGTAGTT +
Preference number: 4 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPISQTL*NSSEVV
Trigger: AACTACTTCACTACTGTTTCAGAGAGTTTGGCTGAT...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp CAGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAAGAGCTACCTGATGCCTaGGATGCAAAACTACTGAAA +
Preference number: 4 (lower is better)
Translates to: QTVKKLWSQRRDLCSGVEELPDA*DAKLLK
Trigger: TTTCAGTAGTTTTGCATCTCAGGCATCAGGTAGCTC...TTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATGTACCCCTTTTCGAGTaGAGATCAACCTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: SWRDIHFPMYLWANESHHVPLFE*RSTSGS
Trigger: ACTTCCGGAGGTTGATCTTCACTCGAAAAGGGGTAC...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATTATGCTAGGAAGCTGTaGCATCCCATTGGTGACGGC +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYYARKL*HPIGDG
Trigger: GCCGTCACCAATGGGATGTCACAGCTTCCTAGCATA...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCACTACCACTGAGGCAATaGTGTGGTCAAGAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSLPLRQ*CGQESW
Trigger: CCAACTTTCTTGACCACATCATTGCCTCAGTGGTAG...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TGGGACTGTCCCTTTGCACACTTCAACCAGGAGAAAACTTCTTCATCACCCATCCTTATTTTCTACCACTaGGGCAATGATGTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: WDCPFAHFNQEKTSSSPILIFYH*GNDVVK
Trigger: CTTGACCACATCATTGCCTCAGTGGTAGAAAATAAG...GATGGGTGATGAAGAAGTTTTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp GGAAGATCTTCCAATTGTTTTTGTTGCTGGGGTCATGGAGACACAGAAGCCTCCCTTATTTTCTACCACTaGGGCAATGATGTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: GRSSNCFCCWGHGDTEASLIFYH*GNDVVK
Trigger: CTTGACCACATCATTGCCTCAGTGGTAGAAAATAAG...GGAGGCTTCTGTGTCTCCATGACCCCAGCAACAAAAACAATTGGAAGATCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTCACAAAGCCAGGAGTaGGAAGTATGGGGATCTAGC +
Preference number: 4 (lower is better)
Translates to: SWRDIHFPMYLWANESHHSQSQE*EVWGSS
Trigger: GCTAGATCCCCATACTTCTCACTCCTGGCTTTGTGA...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGCAACTGTATAGATTGTaGACCTGGTGTGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMQLYRL*TWCGAP
Trigger: TGGAGCCCCACACCAGGTTCACAATCTATACAGTTG...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATCAACTGTATAGATTGTaGACCTGGTGTGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SWRDIHFPMYLWANESHHQLYRL*TWCGAP
Trigger: TGGAGCCCCACACCAGGTTCACAATCTATACAGTTG...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATTGGATTCATGAGCCTTaGGGGTGCCAACCGCATCTT +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYWIHEP*GCQPHL
Trigger: AAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCA...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTGTCAACCTTCAGTGTTaGGGCAGCGTAGAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: LSDFHQACLSNYPILVPVVNLQC*GSVEES
Trigger: ACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGAC...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCCTCAAACTGTGTGTGTaGACAGTACGACTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFLKLCV*TVRLSC
Trigger: ACAGGAAAGTCGTACTGTTCACACACACAGTTTGAG...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TGGGACTGTCCCTTTGCACACTTCAACCAGGAGAAAACTTCTTCATCACCCATCAAGTTCCTTCTCATATaGCTGTTCCCTCAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: WDCPFAHFNQEKTSSSPIKFLLI*LFPQGK
Trigger: CTTACCTTGAGGGAACAGTCATATGAGAAGGAACTT...GATGGGTGATGAAGAAGTTTTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAGTACCTATGGGCCAATaGATCCCACCATTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPVPMGQ*IPPFSN
Trigger: ATTTGAAAATGGTGGGATTCATTGGCCCATAGGTAC...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTTCCAAGAACGGATCTaGCTTTACACAGGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SWRDIHFPMYLWANESHHFQERI*LYTGLS
Trigger: GCTCAGGCCTGTGTAAAGGCAGATCCGTTCTTGGAA...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGAGAAAGCCGCCTGAGTaGCTGCCAAAGACGTTACTA +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMRKPPE*LPKTLL
Trigger: TAGTAACGTCTTTGGCAGGCACTCAGGCGGCTTTCT...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTGTGGGACTGTCCCTTTaGACACTTCAACCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LSDFHQACLSNYPILVPVVGLSL*TLQPGE
Trigger: TTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCAC...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCCGACCTCAGGGACCCTaGTTCTTTTGTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTRPQGP*FFCFFF
Trigger: AAAGAAGAAACAAAAGAAGCAGGGTCCCTGAGGTCG...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGGGGTATCAGTCAAGTTaGAGGCCCGCTTTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMGYQSS*RPALKH
Trigger: ATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCC...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCGTCAGGCGGAAACAGTaGTTTACATGTTCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFVRRKQ*FTCSGD
Trigger: ATCTCCAGAACATGTAAAGCACTGTTTCCGCCTGAC...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATCCATGCCTAGGACCTTaGCAGTTTGGATTCATGAGC +
Preference number: 4 (lower is better)
Translates to: SWRDIHFPMYLWANESHHPCLGP*QFGFMS
Trigger: GCTCATGAATCCAAACTGGCAAGGTCCTAGGCATGG...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCTCCATCAGCATCACATaGATTAGTCTGGGATCTACC +
Preference number: 4 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTSISIT*ISLGST
Trigger: GGTAGATCCCAGACTAATCCATGTGATGCTGATGGA...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp GCCAGGATGTATTTTGAGGTCTCTAGATCTATCCCTTCTGCTAGGGAGGAAGAGTGTGGCTGTAGAATATaGAGTGAAAGATGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ARMYFEVSRSIPSAREEECGCRI*SERCRC
Trigger: ACACCTGCATCTTTCACTCCATATTCTACAGCCACA...CTCTTCCTCCCTAGCAGAAGGGATAGATCTAGAGACCTCAAAATACATCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGGCTAGAACACCATTaGACTGGCTCCTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMWLEHH*TGSFHF
Trigger: GAAGTGGAAGGAGCCAGTCCAATGGTGTTCTAGCCA...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp CTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGATTGCCAGCCTTAGAGCCTaGCTTAGTGTCTGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LPPGMFKQLPHTCTSYVIASLRA*LSVCSK
Trigger: CTTGGAACAGACACTAAGCCAGGCTCTAAGGCTGGC...AATCACATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTGCTAGAGGAGAGAGTTaGCATCTCAATGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTIARGES*HLNGLS
Trigger: ACTCAGCCCATTGAGATGCCAACTCTCTCCTCTAGC...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCATTGCGACAAACCCAGTaGATGTTGAAGAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPLRQTQ*MLKRVV
Trigger: AACAACTCTCTTCAACATCCACTGGGTTTGTCGCAA...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAACTGTTAAAAAGCTTTaGAGTCAGCGGAGAGACCTT +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPTVKKL*SQRRDL
Trigger: AAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGT...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTTGTGGTCAAGAAAGTTaGGTAGGCTGGCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LSDFHQACLSNYPILVPVCGQES*VGWPCS
Trigger: AGAGCAAGGCCAGCCTACCCAACTTTCTTGACCACA...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCTCCTTCACTTCCTTCTaGGTATCAGTCAAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTSFTSF*VSVKLQ
Trigger: CTGCAACTTGACTGATACCCAGAAGGAAGTGAAGGA...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAGTCTACATCCTGGTCTCCTTCACTTCCTTCTaGGTATCAGTCAAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: HIGNYSTVPAVHQVYILVSFTSF*VSVKLQ
Trigger: CTGCAACTTGACTGATACCCAGAAGGAAGTGAAGGA...GACCAGGATGTAGACTTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp GTTTCGTTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCATCGTTTGGTATATTCTaGCAGAGGAAGGTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: VSFPEEALGFMLGSCDIPSFGIF*QRKVLH
Trigger: ATGGAGAACCTTCCTCTGCCAGAATATACCAAACGA...TGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAACGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp TTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCATTGGTGTCGTTTGGTATATTCTaGCAGAGGAAGGTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: FPEEALGFMLGSCDIPLVSFGIF*QRKVLH
Trigger: ATGGAGAACCTTCCTCTGCCAGAATATACCAAACGA...CACCAATGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATATTGTGAACCTGGTGTaGGGCTCCAGCAGGTATGAA +
Preference number: 4 (lower is better)
Translates to: SWRDIHFPMYLWANESHHIVNLV*GSSRYE
Trigger: TTCATACCTGCTGGAGCCCCACACCAGGTTCACAAT...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAGTCTACATCCTGGTCGTAGAAGAGAGTGGCTaGAGAGTTTGGAATACTGAC +
Preference number: 4 (lower is better)
Translates to: HIGNYSTVPAVHQVYILVVEESG*RVWNTD
Trigger: GTCAGTATTCCAAACTCTCCAGCCACTCTCTTCTAC...GACCAGGATGTAGACTTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCGTAGAAGAGAGTGGCTaGAGAGTTTGGAATACTGAC +
Preference number: 4 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTVEESG*RVWNTD
Trigger: GTCAGTATTCCAAACTCTCCAGCCACTCTCTTCTAC...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCGTAGAAGAGAGTGGCTaGAGAGTTTGGAATACTGAC +
Preference number: 4 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFVEESG*RVWNTD
Trigger: GTCAGTATTCCAAACTCTCCAGCCACTCTCTTCTAC...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTATTTCAGCGTAGAAGAGAGTaGCTGGAGAGTTTGGAATAC +
Preference number: 4 (lower is better)
Translates to: WVSVKLQARFEASEVFLFQRRRE*LESLEY
Trigger: GTATTCCAAACTCTCCAGCCACTCTCTTCTACGCTG...AAATAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTGGGATGTGGCACTCTTaGCTTGGAGTCTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: LSDFHQACLSNYPILVPVGMWHS*LGVSNC
Trigger: ACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCC...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATAATCCTGGAGCCTCCTaGGAAAAGCAGTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYNPGAS*EKQWVL
Trigger: GAGAACCCACTGCTTTTCCCAGGAGGCTCCAGGATT...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
3UTR CAA 72 bp GACATCCCATTGGTGACGGCAGGTCTCAATACAGATTaGTTCTGTCGACTGATACAAGGGCAGTTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: DIPLVTAGLNTD*FCRLIQGQFAL
Trigger: TAAAGCAAACTGCCCTTGTATCAGTCGACAGAACAAATCTGTATTGAGACCTGCCGTCACCAATGGGATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTTGGGATCTACCGACTTaGTCTCACCACTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTIWDLPT*SHHSQL
Trigger: TAACTGAGAGTGGTGAGATCAAGTCGGTAGATCCCA...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGGTTTGGGACATGCATTaGAAAAACAAGTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQVWDMH*KNKFLE
Trigger: CTCCAAAAACTTGTTTTTTCAATGCATGTCCCAAAC...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTACCCCTTTTCGAGTaGAGATCAACCTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYVPLFE*RSTSGS
Trigger: ACTTCCGGAGGTTGATCTTCACTCGAAAAGGGGTAC...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp TTCTGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTAAAACCCAGTGGATGTTaGAGAGAGTTGTTTCACACA +
Preference number: 4 (lower is better)
Translates to: FWVSVKLQARFEASEVFLKPSGC*RELFHT
Trigger: TGTGTGAAACAACTCTCTTCAACATCCACTGGGTTT...TAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCATTTGTTCTGTCGACTaGTACAAGGGCAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTICSVD*YKGSLL
Trigger: AAGCAAACTGCCCTTGTATCAGTCGACAGAACAAAT...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCTCTTCTTTAGCCTTCTaGGTTGCTAAATCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFSSLAF*VAKSAN
Trigger: GTTGGCAGATTTAGCAACTCAGAAGGCTAAAGAAGA...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATAATGAGACTCTTTATTaGGCACCGACCTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYNETLY*APTSGT
Trigger: GGTCCCTGAGGTCGGTGCTCAATAAAGAGTCTCATT...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GAAATCCCGAACTTTCACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAAGCCCAAAGGGTGAATaGGACTCTTTATTGAGCACC +
Preference number: 4 (lower is better)
Translates to: EIPNFHIGNYSTVPAVHQSPKGE*DSLLST
Trigger: GGTGCTCAATAAAGAGTCTCATTCACCCTTTGGGCT...TTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTGAAAGTTCGGGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCCTTATTTTCTACCACTaGGGCAATGATGTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTLIFYH*GNDVVK
Trigger: CTTGACCACATCATTGCCTCAGTGGTAGAAAATAAG...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTATTTGTAGTCGTTTGCATATaGTCTCGAAACCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: WVSVKLQARFEASEVFLFVVVCI*SRNHPR
Trigger: TCTGGGATGGTTTCGAGATCATATGCAAACGACTAC...AAATAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCAGTAGTCGTTTGCATATaGTCTCGAAACCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSVVVCI*SRNHPR
Trigger: TCTGGGATGGTTTCGAGATCATATGCAAACGACTAC...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCACCTCGTCAATTGTCTTaGGTACCTCTTCATCATGAG +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSPRQLS*VPLHHE
Trigger: CTCATGATGAAGAGGTACTCAAGACAATTGACGAGG...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTAAGTTCCTTCTCATATaGCTGTTCCCTCAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFKFLLI*LFPQGK
Trigger: CTTACCTTGAGGGAACAGTCATATGAGAAGGAACTT...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATCTCAGACATTACGAGTaGTGGAGTCCTGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYLRHYE*WSPDGS
Trigger: TGAGCCATCAGGACTCCATCACTCGTAATGTCTGAG...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542866.2
CDS-3UTR GCA 90 bp CTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGATTGCACCACCAGAGTCCTaGCGTTTTCTTTGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: LPPGMFKQLPHTCTSYVIAPPES*RFLWCK
Trigger: CTTACACCAAAGAAAACGGCAGGACTCTGGTGGTGC...AATCACATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATTTCCAAGAACGGATCTaGCTTTACACAGGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYFQERI*LYTGLS
Trigger: GCTCAGGCCTGTGTAAAGGCAGATCCGTTCTTGGAA...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATCAGCTTCTTCACTTTaGTTACATCTTTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: ISNQENVQESPAMFRQFGSASSL*LHLSAL
Trigger: CAGTGCTGAAAGATGTAAGCAAAGTGAAGAAGCTGA...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACACAGTAGAATCATCTTaGTCCTGTTCCTTAAACTTC +
Preference number: 4 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHTVESS*SCSLNF
Trigger: GAAGTTTAAGGAACAGGAGCAAGATGATTCTACTGT...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCACGACCTCAGGGACCCTaGTTCTTTTGTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSRPQGP*FFCFFF
Trigger: AAAGAAGAAACAAAAGAAGCAGGGTCCCTGAGGTCG...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCAGTCAGGCGGAAACAGTaGTTTACATGTTCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSVRRKQ*FTCSGD
Trigger: ATCTCCAGAACATGTAAAGCACTGTTTCCGCCTGAC...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATTCCAGCAAAGAGCCCTaGCGTTCCCTGTTAAGTGTT +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYSSKEP*RSLLSV
Trigger: AACACTTAACAGGGAACGGCAGGGCTCTTTGCTGGA...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp CTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGATTTCCAGCAAAGAGCCCTaGCGTTCCCTGTTAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LPPGMFKQLPHTCTSYVISSKEP*RSLLSV
Trigger: AACACTTAACAGGGAACGGCAGGGCTCTTTGCTGGA...AATCACATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTTTGTCAGAGGTCACGTaGAGAGACGCTATCAGACTT +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTILSEVT*RDAIRL
Trigger: AAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAA...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp ATCTCGTTTGGTATATTCTGGCAGAGGAAGGTTCTCCATCAGATCTTCAAACCTAGTAAAAGTCAGGGCTaGCCATTGTGCAATGGAGAC +
Preference number: 4 (lower is better)
Translates to: ISFGIFWQRKVLHQIFKPSKSQG*PLCNGD
Trigger: GTCTCCATTGCACAATGGCCAGCCCTGACTTTTACT...AGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAACGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CCA 90 bp AGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACTTGCGACAAACCCAGTaGATGTTGAAGAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: RLLKSFGVSGETFAVELNLRQTQ*MLKRVV
Trigger: AACAACTCTCTTCAACATCCACTGGGTTTGTCGCAA...GTTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCTTGCGACAAACCCAGTaGATGTTGAAGAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFLRQTQ*MLKRVV
Trigger: AACAACTCTCTTCAACATCCACTGGGTTTGTCGCAA...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATAGATTCTCTGGTTCGTaGGACTGTCCCTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYRFSGS*DCPFAH
Trigger: GTGTGCAAAGGGACAGTCCCACGAACCAGAGAATCT...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCATCCTTCACTTCCTTCTaGGTATCAGTCAAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSSFTSF*VSVKLQ
Trigger: CTGCAACTTGACTGATACCCAGAAGGAAGTGAAGGA...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGATTCTGGCTAAAGGCTTCTaGCTTCCAGAGCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: LPPGMFKQLPHTCTSYVILAKGF*LPELRL
Trigger: AAGTCTGAGCTCTGGAAGCCAGAAGCCTTTAGCCAG...AATCACATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTGGTCTCCAAATTCCTaGCTAAAGGCTTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SWRDIHFPMYLWANESHHWSPNS*LKASGF
Trigger: GAAGCCAGAAGCCTTTAGCCAGGAATTTGGAGACCA...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GGTTTTGTTGTTGGAGGCAGTGGGACCCAGCAACAGACTGTTAAAAAGCTTTGGATCTTCAAACCTGGTTaGCATCATGTCTCGAAAATC +
Preference number: 4 (lower is better)
Translates to: GFVVGGSGTQQQTVKKLWIFKPG*HHVSKI
Trigger: GATTTTCGAGACATGATGCCAACCAGGTTTGAAGAT...CCAAAGCTTTTTAACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGGCCTGCCATCTCGTTTaGTATATTCTGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMACHLV*YILAEE
Trigger: TTCCTCTGCCAGAATATACCAAACGAGATGGCAGGC...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp GGAAGATCTTCCAATTGTTTTTGTTGCTGGGGTCATGGAGACACAGAAGCCTCCGTGCTTTACATGTTCTaGAGATACAAAGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GRSSNCFCCWGHGDTEASVLYMF*RYKVFC
Trigger: GCAGAAGACTTTGTATCTCCAGAACATGTAAAGCAC...GGAGGCTTCTGTGTCTCCATGACCCCAGCAACAAAAACAATTGGAAGATCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCATGTTCAGGCAATTTaGATTTCCAAAAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFHVQAI*ISKRPQ
Trigger: CTGTGGCCTTTTGGAAATCCAAATTGCCTGAACATG...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGCTATCTGTTCCCATCTaGAACAGATGCAACCCATTG +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMLSVPI*NRCNPL
Trigger: CAATGGGTTGCATCTGTTTCAGATGGGAACAGATAG...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCATCAGCCAAACTCTCTaGAACAGTAGTGAAGTAGTT +
Preference number: 4 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTISQTL*NSSEVV
Trigger: AACTACTTCACTACTGTTTCAGAGAGTTTGGCTGAT...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCAGAGATGCAAAACTACTaGAAGGGCTGTGTTCAACTT +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSEMQNY*KGCVQL
Trigger: AAGTTGAACACAGCCCTTTCAGTAGTTTTGCATCTC...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTGTAGTCGTTTGCATATaGTCTCGAAACCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: LSDFHQACLSNYPILVPVVVVCI*SRNHPR
Trigger: TCTGGGATGGTTTCGAGATCATATGCAAACGACTAC...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATAGAAAGGTGTGCCCGTaGATCTCAAATCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: SWRDIHFPMYLWANESHHRKVCP*ISNQEN
Trigger: ATTCTCCTGATTTGAGATTCACGGGCACACCTTTCT...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTTTTACCCAGGAGTGTTaGTTCCAGTTACAGCCATCA +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTIFTQEC*FQLQPS
Trigger: TGATGGCTGTAACTGGAAGCAACACTCCTGGGTAAA...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTCCAAAAGTCAAAGGTTaGGATGAACTAGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTIPKVKG*DELGRG
Trigger: ACCTCTCCCTAGTTCATCGCAACCTTTGACTTTTGG...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATATCAGTGTCTTTCTGTaGCTCTTGTGCAGAGCTACA +
Preference number: 4 (lower is better)
Translates to: SWRDIHFPMYLWANESHHISVFL*LLCRAT
Trigger: TGTAGCTCTGCACAAGAGGCACAGAAAGACACTGAT...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp CTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGATTAGTCCGAGTCTTGTCTaGAAGCCAAGCTTCGTTCAT +
Preference number: 4 (lower is better)
Translates to: LPPGMFKQLPHTCTSYVISPSLV*KPSFVH
Trigger: ATGAACGAAGCTTGGCTTGCAGACAAGACTCGGACT...AATCACATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGAAGGGCTCTCCAGATTaGTTCAGCTTCTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMKGSPD*FSFFTL
Trigger: CAAAGTGAAGAAGCTGAAGCAATCTGGAGAGCCCTT...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAACAGTAGAATCATCTTaGTCCTGTTCCTTAAACTTC +
Preference number: 4 (lower is better)
Translates to: NQENVQESPAMFRQFGFPTVESS*SCSLNF
Trigger: GAAGTTTAAGGAACAGGAGCAAGATGATTCTACTGT...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp TGGGACTGTCCCTTTGCACACTTCAACCAGGAGAAAACTTCTTCATCACCCATCCTTTCAGTTCACTATTaGTATTTGATGCCGAACTGT +
Preference number: 4 (lower is better)
Translates to: WDCPFAHFNQEKTSSSPILSVHY*YLMPNC
Trigger: ACAGTTCGGCATCAAATAGCAATAGTGAACTGAAAG...GATGGGTGATGAAGAAGTTTTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp TTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCATTGGTGCTTTCAGTTCACTATTaGTATTTGATGCCGAACTGT +
Preference number: 4 (lower is better)
Translates to: FPEEALGFMLGSCDIPLVLSVHY*YLMPNC
Trigger: ACAGTTCGGCATCAAATAGCAATAGTGAACTGAAAG...CACCAATGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCATCCAATTGTTTTTGTTaGTGGGGTCATGGAGACACA +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSSNCFC*WGHGDT
Trigger: TGTGTCTCCATGACCCCAGCAACAAAAACAATTGGA...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp TGGGACTGTCCCTTTGCACACTTCAACCAGGAGAAAACTTCTTCATCACCCATCAACCGCATCTTTCACTaGATGGTAAATGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: WDCPFAHFNQEKTSSSPINRIFH*MVNDVL
Trigger: AAGAACATCATTTACCATGCAGTGAAAGATGCGGTT...GATGGGTGATGAAGAAGTTTTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTCCATCAGCATCACATaGATTAGTCTGGGATCTACC +
Preference number: 4 (lower is better)
Translates to: SWRDIHFPMYLWANESHHSISIT*ISLGST
Trigger: GGTAGATCCCAGACTAATCCATGTGATGCTGATGGA...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTTCCTGCCGTTTTCTTTaGTGTAAGTGGCAAAGCGAA +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTISCRFL*CKWQSE
Trigger: TTCGCTTTGCCACTTACACCAAAGAAAACGGCAGGA...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCAAAGGTTTGTTCTCTGTaGCTAGAACACCATTGGACT +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSKVCSL*LEHHWT
Trigger: AGTCCAATGGTGTTCTAGCCACAGAGAACAAACCTT...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGACTGAGGCAATGATGTaGTCAAGAAAGTTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMTEAMM*SRKLGR
Trigger: CCTACCCAACTTTCTTGACCACATCATTGCCTCAGT...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCATCAGATCTTCAAACCTaGTTGGCATCATGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSSDLQT*LASCLE
Trigger: TTCGAGACATGATGCCAACCAGGTTTGAAGATCTGA...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCATCGTTTGGTATATTCTaGCAGAGGAAGGTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSSFGIF*QRKVLH
Trigger: ATGGAGAACCTTCCTCTGCCAGAATATACCAAACGA...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGGGTGAAAATGGTTCCTaGAGTCACCAGTGTTGTACA +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMGENGS*SHQCCT
Trigger: TGTACAACACTGGTGACTCCAGGAACCATTTTCACC...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTATAACTTCCTCAGCATaGACTTTTACCCAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTIITSSA*TFTQEC
Trigger: ACACTCCTGGGTAAAAGTTCATGCTGAGGAAGTTAT...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATTGTAGGGACCTCGGCTaGATATCTCTTGTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYCRDLG*ISLVAF
Trigger: AAAAGCTACAAGAGATATTCAGCCGAGGTCCCTACA...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR TCA 90 bp GAAATCCCGAACTTTCACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAAAGGCTTTGTTTGAATaGGTCCCGACTAGAAGAATC +
Preference number: 4 (lower is better)
Translates to: EIPNFHIGNYSTVPAVHQKALFE*VPTRRI
Trigger: GATTCTTCTAGTCGGGACTCATTCAAACAAAGCCTT...TTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTGAAAGTTCGGGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR TCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGAAACCCAGTGGATGTTaGAGAGAGTTGTTTCACACA +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMKPSGC*RELFHT
Trigger: TGTGTGAAACAACTCTCTTCAACATCCACTGGGTTT...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATTTGTTCTGTCGACTaGTACAAGGGCAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LSDFHQACLSNYPILVPVICSVD*YKGSLL
Trigger: AAGCAAACTGCCCTTGTATCAGTCGACAGAACAAAT...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp ATCTCGTTTGGTATATTCTGGCAGAGGAAGGTTCTCCATCAGATCTTCAAACCTATTTGTTCTGTCGACTaGTACAAGGGCAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: ISFGIFWQRKVLHQIFKPICSVD*YKGSLL
Trigger: AAGCAAACTGCCCTTGTATCAGTCGACAGAACAAAT...AGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAACGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR TCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTTCTTCTTTAGCCTTCTaGGTTGCTAAATCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTISSLAF*VAKSAN
Trigger: GTTGGCAGATTTAGCAACTCAGAAGGCTAAAGAAGA...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATTTCTCTTTTCCATCATaGATCCTCTGCTTCGTCACC +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYFSFPS*ILCFVT
Trigger: GGTGACGAAGCAGAGGATTCATGATGGAAAAGAGAA...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTCTTGTACCAGTTATGTaGTTTCCCCTATCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTILVPVM*FPLSPN
Trigger: GTTTGGAGATAGGGGAAATCACATAACTGGTACAAG...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGCTTGTACCAGTTATGTaGTTTCCCCTATCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMLVPVM*FPLSPN
Trigger: GTTTGGAGATAGGGGAAATCACATAACTGGTACAAG...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp AGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACACAGTAGAATCATCTTaGTCCTGTTCCTTAAACTTC +
Preference number: 4 (lower is better)
Translates to: RLLKSFGVSGETFAVELNTVESS*SCSLNF
Trigger: GAAGTTTAAGGAACAGGAGCAAGATGATTCTACTGT...GTTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR GCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCCTTTCAGTTCACTATTaGTATTTGATGCCGAACTGT +
Preference number: 4 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFLSVHY*YLMPNC
Trigger: ACAGTTCGGCATCAAATAGCAATAGTGAACTGAAAG...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTTCCAATTGTTTTTGTTaGTGGGGTCATGGAGACACA +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTISNCFC*WGHGDT
Trigger: TGTGTCTCCATGACCCCAGCAACAAAAACAATTGGA...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCAACCGCATCTTTCACTaGATGGTAAATGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFNRIFH*MVNDVL
Trigger: AAGAACATCATTTACCATGCAGTGAAAGATGCGGTT...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTAACCGCATCTTTCACTaGATGGTAAATGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: SNQENVQESPAMFRQFGFNRIFH*MVNDVL
Trigger: AAGAACATCATTTACCATGCAGTGAAAGATGCGGTT...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGATTCAGAAGATATTCCACTaGAACCACAGAACCCAAACC +
Preference number: 4 (lower is better)
Translates to: LPPGMFKQLPHTCTSYVIQKIFH*NHRTQT
Trigger: GGTTTGGGTTCTGTGGTTCCAGTGGAATATCTTCTG...AATCACATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGAAGGTTTGTTCTCTGTaGCTAGAACACCATTGGACT +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMKVCSL*LEHHWT
Trigger: AGTCCAATGGTGTTCTAGCCACAGAGAACAAACCTT...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp ATCTCGTTTGGTATATTCTGGCAGAGGAAGGTTCTCCATCAGATCTTCAAACCTACTGTTAAAAAGCTTTaGAGTCAGCGGAGAGACCTT +
Preference number: 4 (lower is better)
Translates to: ISFGIFWQRKVLHQIFKPTVKKL*SQRRDL
Trigger: AAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGT...AGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAACGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTTCAGATCTTCAAACCTaGTTGGCATCATGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTISDLQT*LASCLE
Trigger: TTCGAGACATGATGCCAACCAGGTTTGAAGATCTGA...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTCGTTTGGTATATTCTaGCAGAGGAAGGTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMSFGIF*QRKVLH
Trigger: ATGGAGAACCTTCCTCTGCCAGAATATACCAAACGA...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCAGTGCTTTACATGTTCTaGAGATACAAAGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSVLYMF*RYKVFC
Trigger: GCAGAAGACTTTGTATCTCCAGAACATGTAAAGCAC...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATTGTTGTACACACACATaGGGAACACACCACAGCTTA +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYCCTHT*GTHHSL
Trigger: TAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACA...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR GCA 90 bp ATCTCGTTTGGTATATTCTGGCAGAGGAAGGTTCTCCATCAGATCTTCAAACCTTCAGCTTCTTCACTTTaGTTACATCTTTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: ISFGIFWQRKVLHQIFKPSASSL*LHLSAL
Trigger: CAGTGCTGAAAGATGTAAGCAAAGTGAAGAAGCTGA...AGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAACGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CCA 90 bp CTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGATTTGTGGCTGTAGAATATaGAGTGAAAGATGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LPPGMFKQLPHTCTSYVICGCRI*SERCRC
Trigger: ACACCTGCATCTTTCACTCCATATTCTACAGCCACA...AATCACATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATACTGTTAAAAAGCTTTaGAGTCAGCGGAGAGACCTT +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYTVKKL*SQRRDL
Trigger: AAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGT...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGATTTTTCCAATGTACCTATaGGCCAATGAATCCCACCAT +
Preference number: 4 (lower is better)
Translates to: LPPGMFKQLPHTCTSYVIFPMYL*ANESHH
Trigger: ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAA...AATCACATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR TCA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTGTTTGGGACATGCATTaGAAAAACAAGTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTIVWDMH*KNKFLE
Trigger: CTCCAAAAACTTGTTTTTTCAATGCATGTCCCAAAC...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR GCA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGCTTTCAGTTCACTATTaGTATTTGATGCCGAACTGT +
Preference number: 4 (lower is better)
Translates to: SDFHQACLSNYPILVPVMLSVHY*YLMPNC
Trigger: ACAGTTCGGCATCAAATAGCAATAGTGAACTGAAAG...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGATTAATTGTTTTTGTTGCTaGGGTCATGGAGACACAGAA +
Preference number: 4 (lower is better)
Translates to: LPPGMFKQLPHTCTSYVINCFCC*GHGDTE
Trigger: TTCTGTGTCTCCATGACCCCAGCAACAAAAACAATT...AATCACATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp CTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGATTATCTTCAAACCTGGTTaGCATCATGTCTCGAAAATC +
Preference number: 4 (lower is better)
Translates to: LPPGMFKQLPHTCTSYVIIFKPG*HHVSKI
Trigger: GATTTTCGAGACATGATGCCAACCAGGTTTGAAGAT...AATCACATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CCA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGCTTTACATGTTCTaGAGATACAAAGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYVLYMF*RYKVFC
Trigger: GCAGAAGACTTTGTATCTCCAGAACATGTAAAGCAC...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS CCA 90 bp CAAATTCTACAAAGATCGCTAGGTCCTGGGGCACCGCCCCGCTCATaGCCCGCACCGTGCCGGCCCGCCAGGCTCGAGTGCGCAGCGCAG +
Preference number: 5 (lower is better)
Translates to: QILQRSLGPGAPPRS*PAPCRPARLECAAQ
Trigger: CTGCGCTGCGCACTCGAGCCTGGCGGGCCGGCACGGTGCGGGCCATGAGCGGGGCGGTGCCCCAGGACCTAGCGATCTTTGTAGAATTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS-3UTR CAA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTGTCCGAGGCCGGCCCTaGGGGGCCTGCTTCCCTTTG +
Preference number: 5 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAVRGRP*GACFPL
Trigger: CAAAGGGAAGCAGGCCCCCAAGGGCCGGCCTCGGAC...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS CCA 90 bp GGCTGGCCATTGTGCAATGGAGACTCGAATGCCCTGGAGAAGGACTaGGTCCTCACGGGGCGCCCATACAAGAGACCCTTCCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: GWPLCNGDSNALEKD*VLTGRPYKRPFQQK
Trigger: CTTCTGCTGGAAGGGTCTCTTGTATGGGCGCCCCGTGAGGACCCAGTCCTTCTCCAGGGCATTCGAGTCTCCATTGCACAATGGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTGGTCCGGCTCTGGAGTaGTTACTGGTGCCGGTCCTC +
Preference number: 5 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAGPALE*LLVPVL
Trigger: GAGGACCGGCACCAGTAACAACTCCAGAGCCGGACC...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS TCA 90 bp CGGTTTATCTGGGGGACAAATGTAGACGGTGGCTGCTTGGCTCTCTaGTCCAGCCCTGGCTCTCCACTGGCATTCCCTCCTTTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: RFIWGTNVDGGCLAL*SSPGSPLAFPPFQG
Trigger: GCCCTGGAAAGGAGGGAATGCCAGTGGAGAGCCAGGGCTGGATCAGAGAGCCAAGCAGCCACCGTCTACATTTGTCCCCCAGATAAACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS-3UTR CAA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTAGCAGCAGCAGCCGCTaGCCCACCGGGGAGGCCGCC +
Preference number: 5 (lower is better)
Translates to: SNQENVQESPAMFRQFGFSSSSR*PTGEAA
Trigger: GGCGGCCTCCCCGGTGGGCAAGCGGCTGCTGCTGCT...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS-3UTR CAA 90 bp GTGAAAAATCTGCCGGGGAGGACAGAAAGCCGCCTGAGTGCCTGCCAAAGACGTCAGCTGGGTGCCACCTaGGAGGTGACAGTGGTAGCA +
Preference number: 5 (lower is better)
Translates to: VKNLPGRTESRLSACQRRQLGAT*EVTVVA
Trigger: TGCTACCACTGTCACCTCCAAGGTGGCACCCAGCTG...ACGTCTTTGGCAGGCACTCAGGCGGCTTTCTGTCCTCCCCGGCAGATTTTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CAA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGGCCCAGGCCCCACAGTaGGCCTCTCCTCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: STTFLCQPSVLRQRRREWAQAPQ*ASPLWG
Trigger: GCCCCACAGAGGAGAGGCCAACTGTGGGGCCTGGGC...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS CCA 90 bp GTAAAAGTCAGGGCTGGCCATTGTGCAATGGAGACTCGAATGCCCTaGAGAAGGACTGGGTCCTCACGGGGCGCCCATACAAGAGACCCT +
Preference number: 5 (lower is better)
Translates to: VKVRAGHCAMETRMP*RRTGSSRGAHTRDP
Trigger: AGGGTCTCTTGTATGGGCGCCCCGTGAGGACCCAGTCCTTCTCCAGGGCATTCGAGTCTCCATTGCACAATGGCCAGCCCTGACTTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCATCCAGGGCCCTCGGCTaGCCTCACCTCCATCGCTCC +
Preference number: 5 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPSRALG*PHLHRS
Trigger: GGAGCGATGGAGGTGAGGCAAGCCGAGGGCCCTGGA...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS-3UTR CAA 90 bp AGGCTGGCCTTGCTCTTCACTCCTGCTGAGGATGTAGAGAAGACCGGGGGAAAGCAGCACTGGCTGACCTaGCTTCCAACACTCCCGGAA +
Preference number: 5 (lower is better)
Translates to: RLALLFTPAEDVEKTGGKQHWLT*LPTLPE
Trigger: TTCCGGGAGTGTTGGAAGCAAGGTCAGCCAGTGCTG...CTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGCAAGGCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTCCAGGAGGCCAGTCCTaGAGTTTGAGCACCATTGGC +
Preference number: 5 (lower is better)
Translates to: SVHRRVWGIASPRLLGWAPGGQS*SLSTIG
Trigger: GCCAATGGTGCTCAAACTCAAGGACTGGCCTCCTGG...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTGCTGGAGTCCGAGTCTaGTCTGCAAGCCAAGCTTCG +
Preference number: 5 (lower is better)
Translates to: RVAGEFGILTTLALGEGPAGVRV*SASQAS
Trigger: CGAAGCTTGGCTTGCAGACAAGACTCGGACTCCAGC...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTGCTTTAATTCCCCACTaGCCCCGGGCAGCATGTACC +
Preference number: 5 (lower is better)
Translates to: RVAGEFGILTTLALGEGPALIPH*PRAACT
Trigger: GGTACATGCTGCCCGGGGCAAGTGGGGAATTAAAGC...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp CTAGGACCTTGCCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTTGGTCCGGCTCTGGAGTaGTTACTGGTGCCGGTCCTC +
Preference number: 5 (lower is better)
Translates to: LGPCQFGFMSLEGANRIFGPALE*LLVPVL
Trigger: GAGGACCGGCACCAGTAACAACTCCAGAGCCGGACC...AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTTCAGTGCTGTCGGCTTaGGGAACATGGTCCGGCTCT +
Preference number: 5 (lower is better)
Translates to: RVAGEFGILTTLALGEGPSVLSA*GTWSGS
Trigger: AGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGA...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGCAGCACTGGCTGACCTaGCTTCCAACACTCCCGGAA +
Preference number: 5 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMQHWLT*LPTLPE
Trigger: TTCCGGGAGTGTTGGAAGCAAGGTCAGCCAGTGCTG...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GAAGGCTGGAGTGAGGGTGGGCATGGACTCTGCAGGCACTTTCCGGTCCACAGAGAGAAGCCCAAAGGTTaGTTCTCTGTGGCTAGAACA +
Preference number: 5 (lower is better)
Translates to: EGWSEGGHGLCRHFPVHREKPKG*FSVART
Trigger: TGTTCTAGCCACAGAGAACAAACCTTTGGGCTTCTC...TCTGTGGACCGGAAAGTGCCTGCAGAGTCCATGCCCACCCTCACTCCAGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CAA 90 bp TGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTATTTGCCCAGGCCCCACAGTaGGCCTCTCCTCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: WVSVKLQARFEASEVFLFAQAPQ*ASPLWG
Trigger: GCCCCACAGAGGAGAGGCCAACTGTGGGGCCTGGGC...AAATAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CAA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTGCTGGAGTCCGAGTCTaGTCTGCAAGCCAAGCTTCG +
Preference number: 5 (lower is better)
Translates to: RCARESQIRRMCRKAPPCAGVRV*SASQAS
Trigger: CGAAGCTTGGCTTGCAGACAAGACTCGGACTCCAGC...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCAGTCCGAGGCCGGCCCTaGGGGGCCTGCTTCCCTTTG +
Preference number: 5 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSVRGRP*GACFPL
Trigger: CAAAGGGAAGCAGGCCCCCAAGGGCCGGCCTCGGAC...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGGGTCCGGCTCTGGAGTaGTTACTGGTGCCGGTCCTC +
Preference number: 5 (lower is better)
Translates to: STTFLCQPSVLRQRRREWGPALE*LLVPVL
Trigger: GAGGACCGGCACCAGTAACAACTCCAGAGCCGGACC...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TCTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTCAGTGCTGTCGGCTTaGGGAACATGGTCCGGCTCT +
Preference number: 5 (lower is better)
Translates to: SDVSAVGFGNMVRLWSCYSVLSA*GTWSGS
Trigger: AGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGA...GTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp TCCACCATCATCATGGCCTCCTTCTCAGACATTACGAGCTGGCAGAACTGGTCCCAGCACTGGCTGACCTaGCTTCCAACACTCCCGGAA +
Preference number: 5 (lower is better)
Translates to: STIIMASFSDITSWQNWSQHWLT*LPTLPE
Trigger: TTCCGGGAGTGTTGGAAGCAAGGTCAGCCAGTGCTG...GGACCAGTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCATGATGATGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGCCAGGAGGCCAGTCCTaGAGTTTGAGCACCATTGGC +
Preference number: 5 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQPGGQS*SLSTIG
Trigger: GCCAATGGTGCTCAAACTCAAGGACTGGCCTCCTGG...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp CTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTCCAGGAGGCCAGTCCTaGAGTTTGAGCACCATTGGC +
Preference number: 5 (lower is better)
Translates to: LMSVLSALGTWSGSGVVTPGGQS*SLSTIG
Trigger: GCCAATGGTGCTCAAACTCAAGGACTGGCCTCCTGG...AGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp GAGGGTGGGGCCGTGTCAGGGCAAGGAGGCCTGATGGCTTTCAGTTCACTATTGGTGGCAAAGCGAATGTaGCGGTTTATCTCCATCGCT +
Preference number: 5 (lower is better)
Translates to: EGGAVSGQGGLMAFSSLLVAKRM*RFISIA
Trigger: AGCGATGGAGATAAACCGCAACATTCGCTTTGCCAC...CAATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTGACACGGCCCCACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CAA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGTCTGACAGGTCACTGTaGGTGCTGGAGTCCGAGTCT +
Preference number: 5 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQSDRSL*VLESES
Trigger: AGACTCGGACTCCAGCACCAACAGTGACCTGTCAGA...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTACCTTTGCAGTGGAGTaGAACGAGTCCAGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: RVAGEFGILTTLALGEGPTFAVE*NESSPK
Trigger: CTTTGGGCTGGACTCGTTCAACTCCACTGCAAAGGT...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGCTAGACCCTTCGGTTTaGTTGTTGGAGGCAGTGGGA +
Preference number: 5 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMLDPSV*LLEAVG
Trigger: TCCCACTGCCTCCAACAACAAAACCGAAGGGTCTAG...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AGGCTGGCCTTGCTCTTCACTCCTGCTGAGGATGTAGAGAAGACCGGGGGAAAGAGTTGCAGGCCCGCTTaGAAGCATCTGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: RLALLFTPAEDVEKTGGKSCRPA*KHLRFS
Trigger: AGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACT...CTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAGCAAGGCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp AGTGTTCACAGGAGAGTGTGGGGAATAGCTTCACCCCGTCTCCTGGGATGGGCTAGTTGCAGGCCCGCTTaGAAGCATCTGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: SVHRRVWGIASPRLLGWASCRPA*KHLRFS
Trigger: AGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACT...AGCCCATCCCAGGAGACGGGGTGAAGCTATTCCCCACACTCTCCTGTGAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TTGGTGCTGGAGTCCGAGTCTTGTCTGCAAGCCAAGCTTCGTTCATCCAGTGAGGTTTTTCCTGCCTCTTaGTTTTCGGCTCCACCCACC +
Preference number: 5 (lower is better)
Translates to: LVLESESCLQAKLRSSSEVFPAS*FSAPPT
Trigger: GGTGGGTGGAGCCGAAAACAAAGAGGCAGGAAAAAC...CTCACTGGATGAACGAAGCTTGGCTTGCAGACAAGACTCGGACTCCAGCACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CAA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGTATGCCCTGGCCAACTaGTTCCAGTGTTTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMYALAN*FQCFSC
Trigger: GCAGGAAAAACACTGGAACAAGTTGGCCAGGGCATA...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAGCTTTAATTCCCCACTaGCCCCGGGCAGCATGTACC +
Preference number: 5 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPALIPH*PRAACT
Trigger: GGTACATGCTGCCCGGGGCAAGTGGGGAATTAAAGC...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAGCTTTAATTCCCCACTaGCCCCGGGCAGCATGTACC +
Preference number: 5 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCEALIPH*PRAACT
Trigger: GGTACATGCTGCCCGGGGCAAGTGGGGAATTAAAGC...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GAAGGCTGGAGTGAGGGTGGGCATGGACTCTGCAGGCACTTTCCGGTCCACAGAGCTTTCAGTTCACTATaGCTATTTGATGCCGAACTG +
Preference number: 5 (lower is better)
Translates to: EGWSEGGHGLCRHFPVHRAFSSL*LFDAEL
Trigger: CAGTTCGGCATCAAATAGCAATAGTGAACTGAAAGC...TCTGTGGACCGGAAAGTGCCTGCAGAGTCCATGCCCACCCTCACTCCAGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CAA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTCTAGACCCTTCGGTTTaGTTGTTGGAGGCAGTGGGA +
Preference number: 5 (lower is better)
Translates to: RCARESQIRRMCRKAPPCLDPSV*LLEAVG
Trigger: TCCCACTGCCTCCAACAACAAAACCGAAGGGTCTAG...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACTTGGGTAGGCTGGCCTaGCTCTTCACTCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHLGRLA*LFTPAE
Trigger: CTCAGCAGGAGTGAAGAGCAAGGCCAGCCTACCCAA...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACCAGCACTGGCTGACCTaGCTTCCAACACTCCCGGAA +
Preference number: 5 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHQHWLT*LPTLPE
Trigger: TTCCGGGAGTGTTGGAAGCAAGGTCAGCCAGTGCTG...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGCCAGGAGGCCAGTCCTaGAGTTTGAGCACCATTGGC +
Preference number: 5 (lower is better)
Translates to: STTFLCQPSVLRQRRREWPGGQS*SLSTIG
Trigger: GCCAATGGTGCTCAAACTCAAGGACTGGCCTCCTGG...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTTCCATGCCTAGGACCTaGCCAGTTTGGATTCATGAG +
Preference number: 5 (lower is better)
Translates to: RVAGEFGILTTLALGEGPSMPRT*PVWIHE
Trigger: CTCATGAATCCAAACTGGCAAGGTCCTAGGCATGGA...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTTGTGGCACTCTTGGCTaGGAGTCTCAAACTGTGTGT +
Preference number: 5 (lower is better)
Translates to: RVAGEFGILTTLALGEGPCGTLG*ESQTVC
Trigger: ACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACA...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GCCATACTCCTCATAGAGTCGCTTACGGAGGGTCTGGTCCAGGTACCAACTTTGAGGGATGTGGCACTCTaGGCTTGGAGTCTCAAACTG +
Preference number: 5 (lower is better)
Translates to: AILLIESLTEGLVQVPTLRDVAL*AWSLKL
Trigger: CAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCT...CAAAGTTGGTACCTGGACCAGACCCTCCGTAAGCGACTCTATGAGGAGTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACTCCTGGGATGGGCTTaGTCAGAGGTCACGTGCAGA +
Preference number: 5 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPLLGWA*SEVTCR
Trigger: TCTGCACGTGACCTCTGACAAAGCCCATCCCAGGAG...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS CCA 90 bp GTCCTGATGGCTCACAACACCATAGAGCCACCCTTCTTCCCCCTCTaGCTGATATATTTTGACCCTGTGACCTTGAACACTGTAGGGACC +
Preference number: 5 (lower is better)
Translates to: VLMAHNTIEPPFFPL*LIYFDPVTLNTVGT
Trigger: GGTCCCTACAGTGTTCAAGGTCACAGGGTCAAAATATATCAGCCAGAGGGGGAAGAAGGGTGGCTCTATGGTGTTGTGAGCCATCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000512928.1
ENST00000542866.2
CDS CCA 90 bp CACCTACAGGCTCATCCTGCACCACCAGAGTCCTGCCGTTTTCTTTaGTGTAAGTGGCAAAGCGAATGTTGCGGTTTATCTGGGGGACAA +
Preference number: 5 (lower is better)
Translates to: HLQAHPAPPESCRFL*CKWQSECCGLSGGQ
Trigger: TTGTCCCCCAGATAAACCGCAACATTCGCTTTGCCACTTACACCAAAGAAAACGGCAGGACTCTGGTGGTGCAGGATGAGCCTGTAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS CCA 90 bp CACCTACAGGCTCATCCTGCACCACCAGAGTCCTGCCGTTTTCTTTaGTGTAAGTGGCAAAGCGAATGTTGCGGTTTATCTCCATCGCTC +
Preference number: 5 (lower is better)
Translates to: HLQAHPAPPESCRFL*CKWQSECCGLSPSL
Trigger: GAGCGATGGAGATAAACCGCAACATTCGCTTTGCCACTTACACCAAAGAAAACGGCAGGACTCTGGTGGTGCAGGATGAGCCTGTAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CAA 90 bp TTTCAGAGGCTCTTCAGATCTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCTCTGACAGGTCACTGTaGGTGCTGGAGTCCGAGTCT +
Preference number: 5 (lower is better)
Translates to: FQRLFRSDVSAVGFGNMVSDRSL*VLESES
Trigger: AGACTCGGACTCCAGCACCAACAGTGACCTGTCAGA...GACCATGTTCCCAAAGCCGACAGCACTGACATCAGATCTGAAGAGCCTCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CAA 90 bp TGGGACTGTCCCTTTGCACACTTCAACCAGGAGAAAACTTCTTCATCACCCATCTCAGTGCTGTCGGCTTaGGGAACATGGTCCGGCTCT +
Preference number: 5 (lower is better)
Translates to: WDCPFAHFNQEKTSSSPISVLSA*GTWSGS
Trigger: AGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGA...GATGGGTGATGAAGAAGTTTTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp CTAGGACCTTGCCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTTACCTTTGCAGTGGAGTaGAACGAGTCCAGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: LGPCQFGFMSLEGANRIFTFAVE*NESSPK
Trigger: CTTTGGGCTGGACTCGTTCAACTCCACTGCAAAGGT...AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp CTTGGCCTTGTTCTTCTCCAACCTTTCGGAGCAGCTCCCGGATCTTCTCTGCATAGCCTGCCATCTCGTTaGGTATATTCTGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: LGLVLLQPFGAAPGSSLHSLPSR*VYSGRG
Trigger: TCCTCTGCCAGAATATACCAAACGAGATGGCAGGCT...ATGCAGAGAAGATCCGGGAGCTGCTCCGAAAGGTTGGAGAAGAACAAGGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGAGCCTGCCATCTCGTTaGGTATATTCTGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQSLPSR*VYSGRG
Trigger: TCCTCTGCCAGAATATACCAAACGAGATGGCAGGCT...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GCCATACTCCTCATAGAGTCGCTTACGGAGGGTCTGGTCCAGGTACCAACTTTGTCCATGCCTAGGACCTaGCCAGTTTGGATTCATGAG +
Preference number: 5 (lower is better)
Translates to: AILLIESLTEGLVQVPTLSMPRT*PVWIHE
Trigger: CTCATGAATCCAAACTGGCAAGGTCCTAGGCATGGA...CAAAGTTGGTACCTGGACCAGACCCTCCGTAAGCGACTCTATGAGGAGTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp GTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGTGTGGCACTCTTGGCTaGGAGTCTCAAACTGTGTGT +
Preference number: 5 (lower is better)
Translates to: VPVNLKSGECAGKPRHVQCGTLG*ESQTVC
Trigger: ACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACA...CTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GAAGGCTGGAGTGAGGGTGGGCATGGACTCTGCAGGCACTTTCCGGTCCACAGAGCAATTACCCCATACTaGTACCAGTTATGTGATTTC +
Preference number: 5 (lower is better)
Translates to: EGWSEGGHGLCRHFPVHRAITPY*YQLCDF
Trigger: GAAATCACATAACTGGTACAAGTATGGGGTAATTGC...TCTGTGGACCGGAAAGTGCCTGCAGAGTCCATGCCCACCCTCACTCCAGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CAA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCACTCCTGGGATGGGCTTaGTCAGAGGTCACGTGCAGA +
Preference number: 5 (lower is better)
Translates to: NQENVQESPAMFRQFGFPLLGWA*SEVTCR
Trigger: TCTGCACGTGACCTCTGACAAAGCCCATCCCAGGAG...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAGGTTCTCCCTGGGTCTaGCAAGACTCCAGTGTTCAC +
Preference number: 5 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPGSPWV*QDSSVH
Trigger: GTGAACACTGGAGTCTTGCAAGACCCAGGGAGAACC...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGGGTTCTCCCTGGGTCTaGCAAGACTCCAGTGTTCAC +
Preference number: 5 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQGSPWV*QDSSVH
Trigger: GTGAACACTGGAGTCTTGCAAGACCCAGGGAGAACC...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS CCA 90 bp GCTCATCCTGCACCACCAGAGTCCTGCCGTTTTCTTTGGTGTAAGTaGCAAAGCGAATGTTGCGGTTTATCTCCATCGCTCCCATTACTG +
Preference number: 5 (lower is better)
Translates to: AHPAPPESCRFLWCK*QSECCGLSPSLPLL
Trigger: CAGTAATGGGAGCGATGGAGATAAACCGCAACATTCGCTTTGCCACTTACACCAAAGAAAACGGCAGGACTCTGGTGGTGCAGGATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CAA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACTTTGACCCTGTGACCTaGAACACTGTAGGGACCTCG +
Preference number: 5 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHFDPVT*NTVGTS
Trigger: CGAGGTCCCTACAGTGTTCAAGGTCACAGGGTCAAA...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGCTCCTTTTAATTTCTTaGATGCAGGGTCACACCCAG +
Preference number: 5 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMLLLIS*MQGHTQ
Trigger: CTGGGTGTGACCCTGCATCAAAGAAATTAAAAGGAG...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACGTTTTTCCTGCCTCTTaGTTTTCGGCTCCACCCACC +
Preference number: 5 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHVFPAS*FSAPPT
Trigger: GGTGGGTGGAGCCGAAAACAAAGAGGCAGGAAAAAC...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGGTGGCTAGAACACCATaGGACTGGCTCCTTCCACTT +
Preference number: 5 (lower is better)
Translates to: STTFLCQPSVLRQRRREWVARTP*DWLLPL
Trigger: AAGTGGAAGGAGCCAGTCCAATGGTGTTCTAGCCAC...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTCTCTCAAGGCTTTGTTaGAATGAGTCCCGACTAGAA +
Preference number: 5 (lower is better)
Translates to: RVAGEFGILTTLALGEGPLSRLC*NESRLE
Trigger: TTCTAGTCGGGACTCATTCAAACAAAGCCTTGAGAG...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTACACCAGATACTAGCTaGGAGGAGTCAGTTGTAATG +
Preference number: 5 (lower is better)
Translates to: RVAGEFGILTTLALGEGPTPDTS*EESVVM
Trigger: CATTACAACTGACTCCTCCAAGCTAGTATCTGGTGT...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp TTGGTGCTGGAGTCCGAGTCTTGTCTGCAAGCCAAGCTTCGTTCATCCAGTGAGACGTTACTAAAGGTTTaGAGGAGGGGATTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: LVLESESCLQAKLRSSSETLLKV*RRGLSC
Trigger: GCAGGACAATCCCCTCCTCAAAACCTTTAGTAACGT...CTCACTGGATGAACGAAGCTTGGCTTGCAGACAAGACTCGGACTCCAGCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CAA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAATGCTTCCCTTTGCTTTaGCCCAGCAACAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCECFPLL*PSNSSA
Trigger: TGCTGAGCTGTTGCTGGGCAAAAGCAAAGGGAAGCA...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGTGCTTCCCTTTGCTTTaGCCCAGCAACAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: STTFLCQPSVLRQRRREWCFPLL*PSNSSA
Trigger: TGCTGAGCTGTTGCTGGGCAAAAGCAAAGGGAAGCA...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACAGCTGTGACATCCCATaGGTGACGGCAGGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHSCDIP*VTAGLN
Trigger: ATTGAGACCTGCCGTCACCAATGGGATGTCACAGCT...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GAAATCCCGAACTTTCACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAGGTCCGGCTCTGGAGTaGTTACTGGTGCCGGTCCTC +
Preference number: 5 (lower is better)
Translates to: EIPNFHIGNYSTVPAVHQGPALE*LLVPVL
Trigger: GAGGACCGGCACCAGTAACAACTCCAGAGCCGGACC...TTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTGAAAGTTCGGGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCTCAGTGCTGTCGGCTTaGGGAACATGGTCCGGCTCT +
Preference number: 5 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFSVLSA*GTWSGS
Trigger: AGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGA...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GAGGGTGGGGCCGTGTCAGGGCAAGGAGGCCTGATGGCTTTCAGTTCACTATTGGTTCACTATTGCTATTaGATGCCGAACTGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: EGGAVSGQGGLMAFSSLLVHYCY*MPNCLF
Trigger: AAACAGACAGTTCGGCATCAAATAGCAATAGTGAAC...CAATAGTGAACTGAAAGCCATCAGGCCTCCTTGCCCTGACACGGCCCCACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGCTAGACCCTTCGGTTTaGTTGTTGGAGGCAGTGGGA +
Preference number: 5 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQLDPSV*LLEAVG
Trigger: TCCCACTGCCTCCAACAACAAAACCGAAGGGTCTAG...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp CACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAAGTCTACATCCTGGTCTTGGGTAGGCTGGCCTaGCTCTTCACTCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: HIGNYSTVPAVHQVYILVLGRLA*LFTPAE
Trigger: CTCAGCAGGAGTGAAGAGCAAGGCCAGCCTACCCAA...GACCAGGATGTAGACTTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCTTGGGTAGGCTGGCCTaGCTCTTCACTCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFLGRLA*LFTPAE
Trigger: CTCAGCAGGAGTGAAGAGCAAGGCCAGCCTACCCAA...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAATGTGGTCAAGAAAGTaGGGTAGGCTGGCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPMWSRK*GRLALL
Trigger: GAGCAAGGCCAGCCTACCCAACTTTCTTGACCACAT...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTCGGAAGATCTTCCAATaGTTTTTGTTGCTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: RVAGEFGILTTLALGEGPRKIFQ*FLLLGS
Trigger: TGACCCCAGCAACAAAAACAATTGGAAGATCTTCCG...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGGGGGTTCTCTTGGCCTaGTTCTTCTCCAACCTTTCG +
Preference number: 5 (lower is better)
Translates to: STTFLCQPSVLRQRRREWGVLLA*FFSNLS
Trigger: CGAAAGGTTGGAGAAGAACAAGGCCAAGAGAACCCC...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTGTCCAGGTACCAACTTaGGTCATGAATTGGGTCATG +
Preference number: 5 (lower is better)
Translates to: RCARESQIRRMCRKAPPCVQVPT*VMNWVM
Trigger: CATGACCCAATTCATGACCAAAGTTGGTACCTGGAC...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACAGGGATGTGGCACTCTaGGCTTGGAGTCTCAAACTG +
Preference number: 5 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHRDVAL*AWSLKL
Trigger: CAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCT...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCCTCCTGGGATGGGCTTaGTCAGAGGTCACGTGCAGA +
Preference number: 5 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTLLGWA*SEVTCR
Trigger: TCTGCACGTGACCTCTGACAAAGCCCATCCCAGGAG...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAGTCAGGGCTGGCCATaGTGCAATGGAGACTCGAAT +
Preference number: 5 (lower is better)
Translates to: NQENVQESPAMFRQFGFPSQGWP*CNGDSN
Trigger: ATTCGAGTCTCCATTGCACAATGGCCAGCCCTGACT...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACAACAGATGCAACCCATaGGCATCTGACAGGAACCGA +
Preference number: 5 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHNRCNP*ASDRNR
Trigger: TCGGTTCCTGTCAGATGCCAATGGGTTGCATCTGTT...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGCTGGGATCTACCGACTaGATCTCACCACTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: STTFLCQPSVLRQRRREWLGSTD*ISPLSV
Trigger: AACTGAGAGTGGTGAGATCAAGTCGGTAGATCCCAG...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp CTGATGTCAGTGCTGTCGGCTTTGGGAACATGGTCCGGCTCTGGAGTTGTTACTTGGCCAGGATGTATTTaGAGGTCTCTAGATCTATCC +
Preference number: 5 (lower is better)
Translates to: LMSVLSALGTWSGSGVVTWPGCI*RSLDLS
Trigger: GGATAGATCTAGAGACCTCAAAATACATCCTGGCCA...AGTAACAACTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGACATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp CTTGGCCTTGTTCTTCTCCAACCTTTCGGAGCAGCTCCCGGATCTTCTCTGCATTGGCCAGGATGTATTTaGAGGTCTCTAGATCTATCC +
Preference number: 5 (lower is better)
Translates to: LGLVLLQPFGAAPGSSLHWPGCI*RSLDLS
Trigger: GGATAGATCTAGAGACCTCAAAATACATCCTGGCCA...ATGCAGAGAAGATCCGGGAGCTGCTCCGAAAGGTTGGAGAAGAACAAGGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp GCACCCTCCCCGATGGGAATCCCAACATACACCATCACATTAACAGCATCAGACAACTGGTCCCCAACATaGGCCAGGATGTATTTTGAG +
Preference number: 5 (lower is better)
Translates to: APSPMGIPTYTITLTASDNWSPT*ARMYFE
Trigger: CTCAAAATACATCCTGGCCAATGTTGGGGACCAGTT...GTCTGATGCTGTTAATGTGATGGTGTATGTTGGGATTCCCATCGGGGAGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTCAAACCCAGTGGATGTaGAAGAGAGTTGTTTCACAC +
Preference number: 5 (lower is better)
Translates to: RCARESQIRRMCRKAPPCQTQWM*KRVVSH
Trigger: GTGTGAAACAACTCTCTTCAACATCCACTGGGTTTG...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTATTTGCTTTAATTCCCCACTaGCCCCGGGCAGCATGTACC +
Preference number: 5 (lower is better)
Translates to: WVSVKLQARFEASEVFLFALIPH*PRAACT
Trigger: GGTACATGCTGCCCGGGGCAAGTGGGGAATTAAAGC...AAATAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGGCTTTCAGTTCACTATaGCTATTTGATGCCGAACTG +
Preference number: 5 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMAFSSL*LFDAEL
Trigger: CAGTTCGGCATCAAATAGCAATAGTGAACTGAAAGC...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAACCTTTGCAGTGGAGTaGAACGAGTCCAGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: ISNQENVQESPAMFRQFGTFAVE*NESSPK
Trigger: CTTTGGGCTGGACTCGTTCAACTCCACTGCAAAGGT...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAATGTGGTCAAGAAAGTaGGGTAGGCTGGCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: ISNQENVQESPAMFRQFGMWSRK*GRLALL
Trigger: GAGCAAGGCCAGCCTACCCAACTTTCTTGACCACAT...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GTTTCGTTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCAATGTGGTCAAGAAAGTaGGGTAGGCTGGCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: VSFPEEALGFMLGSCDIPMWSRK*GRLALL
Trigger: GAGCAAGGCCAGCCTACCCAACTTTCTTGACCACAT...TGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAACGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp GCCAGGATGTATTTTGAGGTCTCTAGATCTATCCCTTCTGCTAGGGAGGAAGAGATGTGGTCAAGAAAGTaGGGTAGGCTGGCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: ARMYFEVSRSIPSAREEEMWSRK*GRLALL
Trigger: GAGCAAGGCCAGCCTACCCAACTTTCTTGACCACAT...CTCTTCCTCCCTAGCAGAAGGGATAGATCTAGAGACCTCAAAATACATCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp GGAAGATCTTCCAATTGTTTTTGTTGCTGGGGTCATGGAGACACAGAAGCCTCCTGGGTATCAGTCAAGTaGCAGGCCCGCTTTGAAGCA +
Preference number: 5 (lower is better)
Translates to: GRSSNCFCCWGHGDTEASWVSVK*QARFEA
Trigger: TGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCA...GGAGGCTTCTGTGTCTCCATGACCCCAGCAACAAAAACAATTGGAAGATCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp AGGTGTGCCCGTGAATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTTCCAATTGTTTTTGTaGCTGGGGTCATGGAGACAC +
Preference number: 5 (lower is better)
Translates to: RCARESQIRRMCRKAPPCFQLFL*LGSWRH
Trigger: GTGTCTCCATGACCCCAGCAACAAAAACAATTGGAA...ACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGATTCACGGGCACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GCCATACTCCTCATAGAGTCGCTTACGGAGGGTCTGGTCCAGGTACCAACTTTGTCTGACCGTAGTCGTTaGCATATGATCTCGAAACCA +
Preference number: 5 (lower is better)
Translates to: AILLIESLTEGLVQVPTLSDRSR*HMISKP
Trigger: TGGTTTCGAGATCATATGCAAACGACTACGGTCAGA...CAAAGTTGGTACCTGGACCAGACCCTCCGTAAGCGACTCTATGAGGAGTATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAAGCCTGCCATCTCGTTaGGTATATTCTGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCESLPSR*VYSGRG
Trigger: TCCTCTGCCAGAATATACCAAACGAGATGGCAGGCT...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGAGGGGTTCTCTTGGCCTaGTTCTTCTCCAACCTTTCG +
Preference number: 5 (lower is better)
Translates to: ISNQENVQESPAMFRQFGGVLLA*FFSNLS
Trigger: CGAAAGGTTGGAGAAGAACAAGGCCAAGAGAACCCC...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp ACAGAGGAGCTTGGAGTTTCTCCATGCCTAGGACCTTGCCAGTTTGGATTCATGTCCATGCCTAGGACCTaGCCAGTTTGGATTCATGAG +
Preference number: 5 (lower is better)
Translates to: TEELGVSPCLGPCQFGFMSMPRT*PVWIHE
Trigger: CTCATGAATCCAAACTGGCAAGGTCCTAGGCATGGA...CATGAATCCAAACTGGCAAGGTCCTAGGCATGGAGAAACTCCAAGCTCCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCATGTCAACCTTCAGTGTaGAGGCAGCGTAGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPCQPSV*RQRRRE
Trigger: CTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACA...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAATGTCAACCTTCAGTGTaGAGGCAGCGTAGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCECQPSV*RQRRRE
Trigger: CTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACA...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp CAGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAAGGTTCTCCCTGGGTCTaGCAAGACTCCAGTGTTCAC +
Preference number: 5 (lower is better)
Translates to: QTVKKLWSQRRDLCSGVEGSPWV*QDSSVH
Trigger: GTGAACACTGGAGTCTTGCAAGACCCAGGGAGAACC...TTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CAA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGTTTTACCCAGGAGTGTaGCTTCCAGTTACAGCCATC +
Preference number: 5 (lower is better)
Translates to: STTFLCQPSVLRQRRREWFYPGV*LPVTAI
Trigger: GATGGCTGTAACTGGAAGCAACACTCCTGGGTAAAA...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATCAGCTGGGTGCCACCTaGGAGGTGACAGTGGTAGCA +
Preference number: 5 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYQLGAT*EVTVVA
Trigger: TGCTACCACTGTCACCTCCAAGGTGGCACCCAGCTG...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp GCACCCTCCCCGATGGGAATCCCAACATACACCATCACATTAACAGCATCAGACACACCAGATACTAGCTaGGAGGAGTCAGTTGTAATG +
Preference number: 5 (lower is better)
Translates to: APSPMGIPTYTITLTASDTPDTS*EESVVM
Trigger: CATTACAACTGACTCCTCCAAGCTAGTATCTGGTGT...GTCTGATGCTGTTAATGTGATGGTGTATGTTGGGATTCCCATCGGGGAGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CAA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAAACTGGTCCCCAACATaGGCCAGGATGTATTTTGAG +
Preference number: 5 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCENWSPT*ARMYFE
Trigger: CTCAAAATACATCCTGGCCAATGTTGGGGACCAGTT...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp CTAGGACCTTGCCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTTCAAACCCAGTGGATGTaGAAGAGAGTTGTTTCACAC +
Preference number: 5 (lower is better)
Translates to: LGPCQFGFMSLEGANRIFQTQWM*KRVVSH
Trigger: GTGTGAAACAACTCTCTTCAACATCCACTGGGTTTG...AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAACCCCAAATCCACATTaGCGACAAACCCAGTGGATG +
Preference number: 5 (lower is better)
Translates to: NQENVQESPAMFRQFGFPTPNPH*RQTQWM
Trigger: CATCCACTGGGTTTGTCGCAAATGTGGATTTGGGGT...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TGGGACTGTCCCTTTGCACACTTCAACCAGGAGAAAACTTCTTCATCACCCATCACCCCAAATCCACATTaGCGACAAACCCAGTGGATG +
Preference number: 5 (lower is better)
Translates to: WDCPFAHFNQEKTSSSPITPNPH*RQTQWM
Trigger: CATCCACTGGGTTTGTCGCAAATGTGGATTTGGGGT...GATGGGTGATGAAGAAGTTTTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp CTAGGACCTTGCCAGTTTGGATTCATGAGCCTTGAGGGTGCCAACCGCATCTTTTGTGCCAGGAATAATTaGTGTGGGCATGAGATTCTC +
Preference number: 5 (lower is better)
Translates to: LGPCQFGFMSLEGANRIFCARNN*CGHEIL
Trigger: GAGAATCTCATGCCCACACAAATTATTCCTGGCACA...AAAGATGCGGTTGGCACCCTCAAGGCTCATGAATCCAAACTGGCAAGGTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp TGGGCTTTGTCAGAGGTCACGTGCAGAGACGCTATCAGACTTCCACCAGGCATGGGTCTCAATACAGATTaGTTCTGTCGACTGATACAA +
Preference number: 5 (lower is better)
Translates to: WALSEVTCRDAIRLPPGMGLNTD*FCRLIQ
Trigger: TTGTATCAGTCGACAGAACAAATCTGTATTGAGACC...CATGCCTGGTGGAAGTCTGATAGCGTCTCTGCACGTGACCTCTGACAAAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTAGCTGTGACATCCCATaGGTGACGGCAGGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: SNQENVQESPAMFRQFGFSCDIP*VTAGLN
Trigger: ATTGAGACCTGCCGTCACCAATGGGATGTCACAGCT...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACAGCTGTGACATCCCATaGGTGACGGCAGGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: RLLKSFGVSGETFAVELNSCDIP*VTAGLN
Trigger: ATTGAGACCTGCCGTCACCAATGGGATGTCACAGCT...GTTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp AGAGTGGCTGGAGAGTTTGGAATACTGACCACACTGGCTCTGGGTGAAGGGCCTGTTCACTATTGCTATTaGATGCCGAACTGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: RVAGEFGILTTLALGEGPVHYCY*MPNCLF
Trigger: AAACAGACAGTTCGGCATCAAATAGCAATAGTGAAC...AGGCCCTTCACCCAGAGCCAGTGTGGTCAGTATTCCAAACTCTCCAGCCACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TTCTGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTACTAGACCCTTCGGTTTaGTTGTTGGAGGCAGTGGGA +
Preference number: 5 (lower is better)
Translates to: FWVSVKLQARFEASEVFLLDPSV*LLEAVG
Trigger: TCCCACTGCCTCCAACAACAAAACCGAAGGGTCTAG...TAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp GGTTTTGTTGTTGGAGGCAGTGGGACCCAGCAACAGACTGTTAAAAAGCTTTGGAGTTGCAGGCCCGCTTaGAAGCATCTGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: GFVVGGSGTQQQTVKKLWSCRPA*KHLRFS
Trigger: AGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACT...CCAAAGCTTTTTAACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp TTCTGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTATGGGTATCAGTCAAGTaGCAGGCCCGCTTTGAAGCA +
Preference number: 5 (lower is better)
Translates to: FWVSVKLQARFEASEVFLWVSVK*QARFEA
Trigger: TGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCA...TAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCTGGGTATCAGTCAAGTaGCAGGCCCGCTTTGAAGCA +
Preference number: 5 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFWVSVK*QARFEA
Trigger: TGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCA...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TTGGTGCTGGAGTCCGAGTCTTGTCTGCAAGCCAAGCTTCGTTCATCCAGTGAGATCTTCCAATTGTTTTaGTTGCTGGGGTCATGGAGA +
Preference number: 5 (lower is better)
Translates to: LVLESESCLQAKLRSSSEIFQLF*LLGSWR
Trigger: TCTCCATGACCCCAGCAACAAAAACAATTGGAAGAT...CTCACTGGATGAACGAAGCTTGGCTTGCAGACAAGACTCGGACTCCAGCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CAA 90 bp GCCATACTCCTCATAGAGTCGCTTACGGAGGGTCTGGTCCAGGTACCAACTTTGGATCTTCAAACCTGGTaGGCATCATGTCTCGAAAAT +
Preference number: 5 (lower is better)
Translates to: AILLIESLTEGLVQVPTLDLQTW*ASCLEN
Trigger: ATTTTCGAGACATGATGCCAACCAGGTTTGAAGATC...CAAAGTTGGTACCTGGACCAGACCCTCCGTAAGCGACTCTATGAGGAGTATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAGCCTGCCATCTCGTTaGGTATATTCTGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: NQENVQESPAMFRQFGFPSLPSR*VYSGRG
Trigger: TCCTCTGCCAGAATATACCAAACGAGATGGCAGGCT...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TTCTGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTAGGGGTTCTCTTGGCCTaGTTCTTCTCCAACCTTTCG +
Preference number: 5 (lower is better)
Translates to: FWVSVKLQARFEASEVFLGVLLA*FFSNLS
Trigger: CGAAAGGTTGGAGAAGAACAAGGCCAAGAGAACCCC...TAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp TTTCCAGAAGAGGCACTAGGGTTTATGCTAGGAAGCTGTGACATCCCATTGGTGTGTCAACCTTCAGTGTaGAGGCAGCGTAGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: FPEEALGFMLGSCDIPLVCQPSV*RQRRRE
Trigger: CTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACA...CACCAATGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS TCA 90 bp CTCATGAGTCTGCTCAGGAATGCAGTCCATTACTGTACCTCGCTTTaGGGCGCTGAATTATCCATCAGCATCACATGGATTAGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LMSLLRNAVHYCTSL*GAELSISITWISLG
Trigger: TCCCAGACTAATCCATGTGATGCTGATGGATAATTCAGCGCCTCAAAGCGAGGTACAGTAATGGACTGCATTCCTGAGCAGACTCATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512928.1
CDS-3UTR CAA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCATTTGACCCTGTGACCTaGAACACTGTAGGGACCTCG +
Preference number: 5 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSFDPVT*NTVGTS
Trigger: CGAGGTCCCTACAGTGTTCAAGGTCACAGGGTCAAA...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCCTGGGATCTACCGACTaGATCTCACCACTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTLGSTD*ISPLSV
Trigger: AACTGAGAGTGGTGAGATCAAGTCGGTAGATCCCAG...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACAGAGGGGTTTCTTCTTaGCTAAAGATGCCGAATCTG +
Preference number: 5 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHRGVSS*LKMPNL
Trigger: CAGATTCGGCATCTTTAGCAAAGAAGAAACCCCTCT...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAACAAACCCAGTGGATGTaGAAGAGAGTTGTTTCACAC +
Preference number: 5 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCEQTQWM*KRVVSH
Trigger: GTGTGAAACAACTCTCTTCAACATCCACTGGGTTTG...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTACCCCAAATCCACATTaGCGACAAACCCAGTGGATG +
Preference number: 5 (lower is better)
Translates to: SNQENVQESPAMFRQFGFTPNPH*RQTQWM
Trigger: CATCCACTGGGTTTGTCGCAAATGTGGATTTGGGGT...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCAACCTTTGCAGTGGAGTaGAACGAGTCCAGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSTFAVE*NESSPK
Trigger: CTTTGGGCTGGACTCGTTCAACTCCACTGCAAAGGT...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATTTGGGTAGGCTGGCCTaGCTCTTCACTCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYLGRLA*LFTPAE
Trigger: CTCAGCAGGAGTGAAGAGCAAGGCCAGCCTACCCAA...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTAGTTGCAGGCCCGCTTaGAAGCATCTGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: SNQENVQESPAMFRQFGFSCRPA*KHLRFS
Trigger: AGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACT...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGCGGAAGATCTTCCAATaGTTTTTGTTGCTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: STTFLCQPSVLRQRRREWRKIFQ*FLLLGS
Trigger: TGACCCCAGCAACAAAAACAATTGGAAGATCTTCCG...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCTCCATGCCTAGGACCTaGCCAGTTTGGATTCATGAG +
Preference number: 5 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFSMPRT*PVWIHE
Trigger: CTCATGAATCCAAACTGGCAAGGTCCTAGGCATGGA...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCTGTCAACCTTCAGTGTaGAGGCAGCGTAGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTCQPSV*RQRRRE
Trigger: CTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACA...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp ACAGAAGCCTCCCATCACAAAGCCAGGAGTGAGAAGTATGGGGATCTAGCACATCCATGTTCAGGCAATTaGGATTTCCAAAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: TEASHHKARSEKYGDLAHPCSGN*DFQKAT
Trigger: TGTGGCCTTTTGGAAATCCAAATTGCCTGAACATGG...ATGTGCTAGATCCCCATACTTCTCACTCCTGGCTTTGTGATGGGAGGCTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATAGTCAGGGCTGGCCATaGTGCAATGGAGACTCGAAT +
Preference number: 5 (lower is better)
Translates to: SWRDIHFPMYLWANESHHSQGWP*CNGDSN
Trigger: ATTCGAGTCTCCATTGCACAATGGCCAGCCCTGACT...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGCAAAAGAATCTGGTTTaGGCTATCTGTTCCCATCTG +
Preference number: 5 (lower is better)
Translates to: STTFLCQPSVLRQRRREWQKNLV*AICSHL
Trigger: CAGATGGGAACAGATAGCCAAAACCAGATTCTTTTG...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGCAAAAGAATCTGGTTTaGGCTATCTGTTCCCATCTG +
Preference number: 5 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQQKNLV*AICSHL
Trigger: CAGATGGGAACAGATAGCCAAAACCAGATTCTTTTG...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGGTGGCAAAGCGAATGTaGCGGTTTATCTGGGGGACA +
Preference number: 5 (lower is better)
Translates to: SDFHQACLSNYPILVPVMVAKRM*RFIWGT
Trigger: TGTCCCCCAGATAAACCGCAACATTCGCTTTGCCAC...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS-3UTR CAA 90 bp TGGGACTGTCCCTTTGCACACTTCAACCAGGAGAAAACTTCTTCATCACCCATCCTCTCAAGGCTTTGTTaGAATGAGTCCCGACTAGAA +
Preference number: 5 (lower is better)
Translates to: WDCPFAHFNQEKTSSSPILSRLC*NESRLE
Trigger: TTCTAGTCGGGACTCATTCAAACAAAGCCTTGAGAG...GATGGGTGATGAAGAAGTTTTCTCCTGGTTGAAGTGTGCAAAGGGACAGTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CAA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAGAGGGGTTTCTTCTTaGCTAAAGATGCCGAATCTG +
Preference number: 5 (lower is better)
Translates to: NQENVQESPAMFRQFGFPRGVSS*LKMPNL
Trigger: CAGATTCGGCATCTTTAGCAAAGAAGAAACCCCTCT...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCACGTTACTAAAGGTTTaGAGGAGGGGATTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFTLLKV*RRGLSC
Trigger: GCAGGACAATCCCCTCCTCAAAACCTTTAGTAACGT...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAACAACTGGTCCCCAACATaGGCCAGGATGTATTTTGAG +
Preference number: 5 (lower is better)
Translates to: RLLKSFGVSGETFAVELNNWSPT*ARMYFE
Trigger: CTCAAAATACATCCTGGCCAATGTTGGGGACCAGTT...GTTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCAGCTTTCAGTTCACTATaGCTATTTGATGCCGAACTG +
Preference number: 5 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPAFSSL*LFDAEL
Trigger: CAGTTCGGCATCAAATAGCAATAGTGAACTGAAAGC...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTTGGGTATCAGTCAAGTaGCAGGCCCGCTTTGAAGCA +
Preference number: 5 (lower is better)
Translates to: LSDFHQACLSNYPILVPVWVSVK*QARFEA
Trigger: TGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCA...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCATTCCAATTGTTTTTGTaGCTGGGGTCATGGAGACAC +
Preference number: 5 (lower is better)
Translates to: NQENVQESPAMFRQFGFPFQLFL*LGSWRH
Trigger: GTGTCTCCATGACCCCAGCAACAAAAACAATTGGAA...TGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GGTTTTGTTGTTGGAGGCAGTGGGACCCAGCAACAGACTGTTAAAAAGCTTTGGTCTGACCGTAGTCGTTaGCATATGATCTCGAAACCA +
Preference number: 5 (lower is better)
Translates to: GFVVGGSGTQQQTVKKLWSDRSR*HMISKP
Trigger: TGGTTTCGAGATCATATGCAAACGACTACGGTCAGA...CCAAAGCTTTTTAACAGTCTGTTGCTGGGTCCCACTGCCTCCAACAACAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp CACAGGATAGGGATGTGGCACTCTTGGCTTGGAGTCTCAAACTGTGTGTGTGAAGATCTTCAAACCTGGTaGGCATCATGTCTCGAAAAT +
Preference number: 5 (lower is better)
Translates to: HRIGMWHSWLGVSNCVCEDLQTW*ASCLEN
Trigger: ATTTTCGAGACATGATGCCAACCAGGTTTGAAGATC...TTCACACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCTATCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGGATCTTCAAACCTGGTaGGCATCATGTCTCGAAAAT +
Preference number: 5 (lower is better)
Translates to: STTFLCQPSVLRQRRREWDLQTW*ASCLEN
Trigger: ATTTTCGAGACATGATGCCAACCAGGTTTGAAGATC...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TTCTGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTAGTCCAGGTACCAACTTaGGTCATGAATTGGGTCATG +
Preference number: 5 (lower is better)
Translates to: FWVSVKLQARFEASEVFLVQVPT*VMNWVM
Trigger: CATGACCCAATTCATGACCAAAGTTGGTACCTGGAC...TAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCGTCCAGGTACCAACTTaGGTCATGAATTGGGTCATG +
Preference number: 5 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFVQVPT*VMNWVM
Trigger: CATGACCCAATTCATGACCAAAGTTGGTACCTGGAC...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTAGGGATGTGGCACTCTaGGCTTGGAGTCTCAAACTG +
Preference number: 5 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTIRDVAL*AWSLKL
Trigger: CAGTTTGAGACTCCAAGCCAAGAGTGCCACATCCCT...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp ATCTCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGACCATGTTCAGGCAATTaGGATTTCCAAAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: ISNQENVQESPAMFRQFGPCSGN*DFQKAT
Trigger: TGTGGCCTTTTGGAAATCCAAATTGCCTGAACATGG...TCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGAACTGTCCTTCCCATTaGGAAACATTAAGAGGAGTC +
Preference number: 5 (lower is better)
Translates to: STTFLCQPSVLRQRRREWNCPSH*ETLRGV
Trigger: GACTCCTCTTAATGTTTCCAAATGGGAAGGACAGTT...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS TCA 90 bp CATACAAGAGACCCTTCCAGCAGAAGCACGATAACTTCCTCAGCATaGACTTTTACCCAGGAGTGTTGCTTCCAGTTACAGCCATCAAAT +
Preference number: 5 (lower is better)
Translates to: HTRDPSSRSTITSSA*TFTQECCFQLQPSN
Trigger: ATTTGATGGCTGTAACTGGAAGCAACACTCCTGGGTAAAAGTTCATGCTGAGGAAGTTATCGTGCTTCTGCTGGAAGGGTCTCTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp CTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGATTTTTGACCCTGTGACCTaGAACACTGTAGGGACCTCG +
Preference number: 5 (lower is better)
Translates to: LPPGMFKQLPHTCTSYVIFDPVT*NTVGTS
Trigger: CGAGGTCCCTACAGTGTTCAAGGTCACAGGGTCAAA...AATCACATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCCTCCTTTTAATTTCTTaGATGCAGGGTCACACCCAG +
Preference number: 5 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFLLLIS*MQGHTQ
Trigger: CTGGGTGTGACCCTGCATCAAAGAAATTAAAAGGAG...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp GAAATCCCGAACTTTCACATCGGAAATTATAGCACAGTTCCTGCAGTTCACCAATATGCCCTGGCCAACTaGTTCCAGTGTTTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: EIPNFHIGNYSTVPAVHQYALAN*FQCFSC
Trigger: GCAGGAAAAACACTGGAACAAGTTGGCCAGGGCATA...TTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTGAAAGTTCGGGATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS-3UTR CAA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGGCTAGAACACCATaGGACTGGCTCCTTCCACTT +
Preference number: 5 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYVARTP*DWLLPL
Trigger: AAGTGGAAGGAGCCAGTCCAATGGTGTTCTAGCCAC...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCAGAGAAGCCCAAAGGTTaGTTCTCTGTGGCTAGAACA +
Preference number: 5 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSEKPKG*FSVART
Trigger: TGTTCTAGCCACAGAGAACAAACCTTTGGGCTTCTC...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGGCTTCAAAAGGAGCTTaGTTCTCCTGTGAAAAATCT +
Preference number: 5 (lower is better)
Translates to: STTFLCQPSVLRQRRREWASKGA*FSCEKS
Trigger: AGATTTTTCACAGGAGAACAAAGCTCCTTTTGAAGC...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCTGGCCAGGATGTATTTaGAGGTCTCTAGATCTATCC +
Preference number: 5 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFWPGCI*RSLDLS
Trigger: GGATAGATCTAGAGACCTCAAAATACATCCTGGCCA...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCCAAACCCAGTGGATGTaGAAGAGAGTTGTTTCACAC +
Preference number: 5 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTQTQWM*KRVVSH
Trigger: GTGTGAAACAACTCTCTTCAACATCCACTGGGTTTG...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTACCCCAAATCCACATTaGCGACAAACCCAGTGGATG +
Preference number: 5 (lower is better)
Translates to: AGEIYIFQCTYGPMNPTITPNPH*RQTQWM
Trigger: CATCCACTGGGTTTGTCGCAAATGTGGATTTGGGGT...AATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCTGTGCCAGGAATAATTaGTGTGGGCATGAGATTCTC +
Preference number: 5 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFCARNN*CGHEIL
Trigger: GAGAATCTCATGCCCACACAAATTATTCCTGGCACA...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AAATGGTTCCTGGAGTCACCAGTGTTGTACACACACATGGGGAACACACCACAGGGTCTCAATACAGATTaGTTCTGTCGACTGATACAA +
Preference number: 5 (lower is better)
Translates to: KWFLESPVLYTHMGNTPQGLNTD*FCRLIQ
Trigger: TTGTATCAGTCGACAGAACAAATCTGTATTGAGACC...CTGTGGTGTGTTCCCCATGTGTGTGTACAACACTGGTGACTCCAGGAACCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCACGTTCACTATTGCTATTaGATGCCGAACTGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: NVQESPAMFRQFGFPKGHVHYCY*MPNCLF
Trigger: AAACAGACAGTTCGGCATCAAATAGCAATAGTGAAC...GTGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TTCTGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTATTCCAATTGTTTTTGTaGCTGGGGTCATGGAGACAC +
Preference number: 5 (lower is better)
Translates to: FWVSVKLQARFEASEVFLFQLFL*LGSWRH
Trigger: GTGTCTCCATGACCCCAGCAACAAAAACAATTGGAA...TAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCGGAAGATCTTCCAATaGTTTTTGTTGCTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: SNQENVQESPAMFRQFGFRKIFQ*FLLLGS
Trigger: TGACCCCAGCAACAAAAACAATTGGAAGATCTTCCG...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTTCTGACCGTAGTCGTTaGCATATGATCTCGAAACCA +
Preference number: 5 (lower is better)
Translates to: SNQENVQESPAMFRQFGFSDRSR*HMISKP
Trigger: TGGTTTCGAGATCATATGCAAACGACTACGGTCAGA...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGGGGTTCTCTTGGCCTaGTTCTTCTCCAACCTTTCG +
Preference number: 5 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYGVLLA*FFSNLS
Trigger: CGAAAGGTTGGAGAAGAACAAGGCCAAGAGAACCCC...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTATTTGTCCAGGTACCAACTTaGGTCATGAATTGGGTCATG +
Preference number: 5 (lower is better)
Translates to: WVSVKLQARFEASEVFLFVQVPT*VMNWVM
Trigger: CATGACCCAATTCATGACCAAAGTTGGTACCTGGAC...AAATAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTTGTGGCACTCTTGGCTaGGAGTCTCAAACTGTGTGT +
Preference number: 5 (lower is better)
Translates to: LSDFHQACLSNYPILVPVCGTLG*ESQTVC
Trigger: ACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACA...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCCCATGTTCAGGCAATTaGGATTTCCAAAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFPCSGN*DFQKAT
Trigger: TGTGGCCTTTTGGAAATCCAAATTGCCTGAACATGG...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp AGTACGACTTTCCTGTGTCAACCTTCAGTGTTGAGGCAGCGTAGAAGAGAGTGGGCAATTACCCCATACTaGTACCAGTTATGTGATTTC +
Preference number: 5 (lower is better)
Translates to: STTFLCQPSVLRQRRREWAITPY*YQLCDF
Trigger: GAAATCACATAACTGGTACAAGTATGGGGTAATTGC...CCACTCTCTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTCCAAAAGGCCATCAGACTCCACTCAGTaGGAAAGTTTTGCTGAAAAT +
Preference number: 5 (lower is better)
Translates to: ECAGKPRHVQAIWISKRPSDSTQ*ESFAEN
Trigger: ATTTTCAGCAAAACTTTCCAACTGAGTGGAGTCTGA...TGGCCTTTTGGAAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS GCA 90 bp TGTCCCAGAGTTCCTCTTAGTTTTTCCATTCACCTGTTCTACACCTaGACCCATACTGCTGAATGTGACCAGATAAAAACACAGACCTAC +
Preference number: 5 (lower is better)
Translates to: CPRVPLSFSIHLFYT*THTAECDQIKTQTY
Trigger: GTAGGTCTGTGTTTTTATCTGGTCACATTCAGCAGTATGGGTGCAGGTGTAGAACAGGTGAATGGAAAAACTAAGAGGAACTCTGGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504095.1
CDS-3UTR CAA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTTTTACCCAGGAGTGTaGCTTCCAGTTACAGCCATC +
Preference number: 5 (lower is better)
Translates to: SDFHQACLSNYPILVPVMFYPGV*LPVTAI
Trigger: GATGGCTGTAACTGGAAGCAACACTCCTGGGTAAAA...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATAACAGATGCAACCCATaGGCATCTGACAGGAACCGA +
Preference number: 5 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYNRCNP*ASDRNR
Trigger: TCGGTTCCTGTCAGATGCCAATGGGTTGCATCTGTT...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp ACAGAGGAGCTTGGAGTTTCTCCATGCCTAGGACCTTGCCAGTTTGGATTCATGTACAGTAGAATCATCTaGCTCCTGTTCCTTAAACTT +
Preference number: 5 (lower is better)
Translates to: TEELGVSPCLGPCQFGFMYSRII*LLFLKL
Trigger: AAGTTTAAGGAACAGGAGCAAGATGATTCTACTGTA...CATGAATCCAAACTGGCAAGGTCCTAGGCATGGAGAAACTCCAAGCTCCTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTGCTTTCAGTTCACTATaGCTATTTGATGCCGAACTG +
Preference number: 5 (lower is better)
Translates to: SNQENVQESPAMFRQFGFAFSSL*LFDAEL
Trigger: CAGTTCGGCATCAAATAGCAATAGTGAACTGAAAGC...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTATCTTCCAATTGTTTTaGTTGCTGGGGTCATGGAGA +
Preference number: 5 (lower is better)
Translates to: SNQENVQESPAMFRQFGFIFQLF*LLGSWR
Trigger: TCTCCATGACCCCAGCAACAAAAACAATTGGAAGAT...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCGATCTTCAAACCTGGTaGGCATCATGTCTCGAAAAT +
Preference number: 5 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTDLQTW*ASCLEN
Trigger: ATTTTCGAGACATGATGCCAACCAGGTTTGAAGATC...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp CTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTGATTTGTGGCACTCTTGGCTaGGAGTCTCAAACTGTGTGT +
Preference number: 5 (lower is better)
Translates to: LPPGMFKQLPHTCTSYVICGTLG*ESQTVC
Trigger: ACACACAGTTTGAGACTCCAAGCCAAGAGTGCCACA...AATCACATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCACCATGTTCAGGCAATTaGGATTTCCAAAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSPCSGN*DFQKAT
Trigger: TGTGGCCTTTTGGAAATCCAAATTGCCTGAACATGG...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp GACGCTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAACTGTCCTTCCCATTaGGAAACATTAAGAGGAGTC +
Preference number: 5 (lower is better)
Translates to: DAIRLPPGMFKQLPHTCTNCPSH*ETLRGV
Trigger: GACTCCTCTTAATGTTTCCAAATGGGAAGGACAGTT...GGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAGCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TCAAATCAGGAGAATGTGCAGGAAAGCCCCGCCATGTTCAGGCAATTTGGATTTGCTTCAAAAGGAGCTTaGTTCTCCTGTGAAAAATCT +
Preference number: 5 (lower is better)
Translates to: SNQENVQESPAMFRQFGFASKGA*FSCEKS
Trigger: AGATTTTTCACAGGAGAACAAAGCTCCTTTTGAAGC...AAATCCAAATTGCCTGAACATGGCGGGGCTTTCCTGCACATTCTCCTGATTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS-3UTR CAA 90 bp CTATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTTGTGCCAGGAATAATTaGTGTGGGCATGAGATTCTC +
Preference number: 5 (lower is better)
Translates to: LSDFHQACLSNYPILVPVCARNN*CGHEIL
Trigger: GAGAATCTCATGCCCACACAAATTATTCCTGGCACA...AACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp CAGACTGTTAAAAAGCTTTGGAGTCAGCGGAGAGACCTTTGCAGTGGAGTTGAAGTTCACTATTGCTATTaGATGCCGAACTGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: QTVKKLWSQRRDLCSGVEVHYCY*MPNCLF
Trigger: AAACAGACAGTTCGGCATCAAATAGCAATAGTGAAC...TTCAACTCCACTGCAAAGGTCTCTCCGCTGACTCCAAAGCTTTTTAACAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp TCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATGTTCCAATTGTTTTTGTaGCTGGGGTCATGGAGACAC +
Preference number: 5 (lower is better)
Translates to: SDFHQACLSNYPILVPVMFQLFL*LGSWRH
Trigger: GTGTCTCCATGACCCCAGCAACAAAAACAATTGGAA...CATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCAATCTTCCAATTGTTTTaGTTGCTGGGGTCATGGAGA +
Preference number: 5 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSIFQLF*LLGSWR
Trigger: TCTCCATGACCCCAGCAACAAAAACAATTGGAAGAT...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp CAGTGTTGTACACACACATGGGGAACACACCACAGCTTAGATGTGACAAAGTTCGCAATTACCCCATACTaGTACCAGTTATGTGATTTC +
Preference number: 5 (lower is better)
Translates to: QCCTHTWGTHHSLDVTKFAITPY*YQLCDF
Trigger: GAAATCACATAACTGGTACAAGTATGGGGTAATTGC...GAACTTTGTCACATCTAAGCTGTGGTGTGTTCCCCATGTGTGTGTACAACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCAAACTGTCCTTCCCATTaGGAAACATTAAGAGGAGTC +
Preference number: 5 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSNCPSH*ETLRGV
Trigger: GACTCCTCTTAATGTTTCCAAATGGGAAGGACAGTT...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS TCA 90 bp GGCAGAGCTGGGCGTATAGATGCTTATTTTCCAGTCTGCTATCACTaGACTAGATATGAAAGCTACTTACTGCATATGATCTCGAAACCA +
Preference number: 5 (lower is better)
Translates to: GRAGRIDAYFPVCYH*TRYESYLLHMISKP
Trigger: TGGTTTCGAGATCATATGCAGTAAGTAGCTTTCATATCTAGTTCAGTGATAGCAGACTGGAAAATAAGCATCTATACGCCCAGCTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505756.1
CDS-3UTR CAA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATTGTGCCAGGAATAATTaGTGTGGGCATGAGATTCTC +
Preference number: 5 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYCARNN*CGHEIL
Trigger: GAGAATCTCATGCCCACACAAATTATTCCTGGCACA...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCAGGTCTCAATACAGATTaGTTCTGTCGACTGATACAA +
Preference number: 5 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSGLNTD*FCRLIQ
Trigger: TTGTATCAGTCGACAGAACAAATCTGTATTGAGACC...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314358.10
ENST00000507996.5
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp ATCAGACTTCCACCAGGCATGTTTAAGCAATTACCCCATACTTGTACCAGTTATTCTGACCGTAGTCGTTaGCATATGATCTCGAAACCA +
Preference number: 5 (lower is better)
Translates to: IRLPPGMFKQLPHTCTSYSDRSR*HMISKP
Trigger: TGGTTTCGAGATCATATGCAAACGACTACGGTCAGA...ATAACTGGTACAAGTATGGGGTAATTGCTTAAACATGCCTGGTGGAAGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS-3UTR CAA 90 bp TTGGAGTCTCAAACTGTGTGTGTGAACAGTACGACTTTCCTGTGTCAACCTTCATCAGACTCCACTCAGTaGGAAAGTTTTGCTGAAAAT +
Preference number: 5 (lower is better)
Translates to: LESQTVCVNSTTFLCQPSSDSTQ*ESFAEN
Trigger: ATTTTCAGCAAAACTTTCCAACTGAGTGGAGTCTGA...TGAAGGTTGACACAGGAAAGTCGTACTGTTCACACACACAGTTTGAGACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000542866.2
CDS TCA 90 bp CAGTCTGCTATCACTGAACTAGATATGAAAGCTACTTACTGCATATaGTCTCGAAACCATCCCAGAAATCCCGAACTTTCACATCGGAAA +
Preference number: 5 (lower is better)
Translates to: QSAITELDMKATYCI*SRNHPRNPELSHRK
Trigger: TTTCCGATGTGAAAGTTCGGGATTTCTGGGATGGTTTCGAGATCATATGCAGTAAGTAGCTTTCATATCTAGTTCAGTGATAGCAGACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505756.1
CDS-3UTR CAA 90 bp TGGGTATCAGTCAAGTTGCAGGCCCGCTTTGAAGCATCTGAGGTTTTCTTATTTTACAGTAGAATCATCTaGCTCCTGTTCCTTAAACTT +
Preference number: 5 (lower is better)
Translates to: WVSVKLQARFEASEVFLFYSRII*LLFLKL
Trigger: AAGTTTAAGGAACAGGAGCAAGATGATTCTACTGTA...AAATAAGAAAACCTCAGATGCTTCAAAGCGGGCCTGCAACTTGACTGATACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507996.5
ENST00000510866.5
CDS-3UTR CAA 90 bp AGCTGGAGAGATATACATTTTCCAATGTACCTATGGGCCAATGAATCCCACCATTACAGTAGAATCATCTaGCTCCTGTTCCTTAAACTT +
Preference number: 5 (lower is better)
Translates to: SWRDIHFPMYLWANESHHYSRII*LLFLKL
Trigger: AAGTTTAAGGAACAGGAGCAAGATGATTCTACTGTA...ATGGTGGGATTCATTGGCCCATAGGTACATTGGAAAATGTATATCTCTCCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS TCA 90 bp TTTTCTATATTCTTTACCCATACAAAGACCCTGAGGTATGTATCTTaGCAAGATGCTAAGAATCTCTTTGTGCTATCAGTCAACCATGAA +
Preference number: 5 (lower is better)
Translates to: FSIFFTHTKTLRYVS*QDAKNLFVLSVNHE
Trigger: TTCATGGTTGACTGATAGCACAAAGAGATTCTTAGCATCTTGTCAAGATACATACCTCAGGGTCTTTGTATGGGTAAAGAATATAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508386.1
CDS GCA 72 bp TCATGGCCCGCACCGTGCCGGCCCGCCAGGCTCGAGTaGGCAGCGCAGGCCCCGGATCTCCGCTCGCCGCTG +
Preference number: 6 (lower is better)
Translates to: SWPAPCRPARLE*AAQAPDLRSPL
Trigger: CAGCGGCGAGCGGAGATCCGGGGCCTGCGCTGCGCACTCGAGCCTGGCGGGCCGGCACGGTGCGGGCCATGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS CCA 72 bp CAAAGATCGCTAGGTCCTGGGGCACCGCCCCGCTCATaGCCCGCACCGTGCCGGCCCGCCAGGCTCGAGTGC +
Preference number: 6 (lower is better)
Translates to: QRSLGPGAPPRS*PAPCRPARLEC
Trigger: GCACTCGAGCCTGGCGGGCCGGCACGGTGCGGGCCATGAGCGGGGCGGTGCCCCAGGACCTAGCGATCTTTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS CCA 72 bp TGTAGACGGTGGCTGCTTGGCTCTCTGATCCAGCCCTaGCTCTCCACTGGCATTCCCTCCTTTCCAGGGCCC +
Preference number: 6 (lower is better)
Translates to: CRRWLLGSLIQP*LSTGIPSFPGP
Trigger: GGGCCCTGGAAAGGAGGGAATGCCAGTGGAGAGCCAGGGCTGGATCAGAGAGCCAAGCAGCCACCGTCTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS CCA 72 bp AGGGCTGGCCATTGTGCAATGGAGACTCGAATGCCCTaGAGAAGGACTGGGTCCTCACGGGGCGCCCATACA +
Preference number: 6 (lower is better)
Translates to: RAGHCAMETRMP*RRTGSSRGAHT
Trigger: TGTATGGGCGCCCCGTGAGGACCCAGTCCTTCTCCAGGGCATTCGAGTCTCCATTGCACAATGGCCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS CCA 72 bp TTGTGCAATGGAGACTCGAATGCCCTGGAGAAGGACTaGGTCCTCACGGGGCGCCCATACAAGAGACCCTTC +
Preference number: 6 (lower is better)
Translates to: LCNGDSNALEKD*VLTGRPYKRPF
Trigger: GAAGGGTCTCTTGTATGGGCGCCCCGTGAGGACCCAGTCCTTCTCCAGGGCATTCGAGTCTCCATTGCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS GCA 72 bp CCCCACCTACAGGCTCATCCTGCACCACCAGAGTCCTaGCGTTTTCTTTGGTGTAAGTGGCAAAGCGAATGT +
Preference number: 6 (lower is better)
Translates to: PHLQAHPAPPES*RFLWCKWQSEC
Trigger: ACATTCGCTTTGCCACTTACACCAAAGAAAACGGCAGGACTCTGGTGGTGCAGGATGAGCCTGTAGGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS CCA 72 bp GCACCACCAGAGTCCTGCCGTTTTCTTTGGTGTAAGTaGCAAAGCGAATGTTGCGGTTTATCTGGGGGACAA +
Preference number: 6 (lower is better)
Translates to: APPESCRFLWCK*QSECCGLSGGQ
Trigger: TTGTCCCCCAGATAAACCGCAACATTCGCTTTGCCACTTACACCAAAGAAAACGGCAGGACTCTGGTGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314358.10
CDS CCA 72 bp GCACCACCAGAGTCCTGCCGTTTTCTTTGGTGTAAGTaGCAAAGCGAATGTTGCGGTTTATCTCCATCGCTC +
Preference number: 6 (lower is better)
Translates to: APPESCRFLWCK*QSECCGLSPSL
Trigger: GAGCGATGGAGATAAACCGCAACATTCGCTTTGCCACTTACACCAAAGAAAACGGCAGGACTCTGGTGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510866.5
CDS CCA 72 bp GGCTATCTGTTCCCATCTGAAACAGATGCAACCCATTaGCATCTGACAGGAACCGAAGCTCTCGATCCAGAA +
Preference number: 6 (lower is better)
Translates to: GYLFPSETDATH*HLTGTEALDPE
Trigger: TTCTGGATCGAGAGCTTCGGTTCCTGTCAGATGCCAATGGGTTGCATCTGTTTCAGATGGGAACAGATAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000512928.1
CDS CCA 72 bp GCTCATCCTGCACCACCAGAGTCCTGCCGTTTTCTTTaGTGTAAGTGGCAAAGCGAATGTTGCGGTTTATCT +
Preference number: 6 (lower is better)
Translates to: AHPAPPESCRFL*CKWQSECCGLS
Trigger: AGATAAACCGCAACATTCGCTTTGCCACTTACACCAAAGAAAACGGCAGGACTCTGGTGGTGCAGGATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS CAA 72 bp TTCCCCCTCTGGCTGATATATTTTGACCCTGTGACCTaGAACACTGTAGGGACCTCGGCTGAATATCTCTTG +
Preference number: 6 (lower is better)
Translates to: FPLWLIYFDPVT*NTVGTSAEYLL
Trigger: CAAGAGATATTCAGCCGAGGTCCCTACAGTGTTCAAGGTCACAGGGTCAAAATATATCAGCCAGAGGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000512928.1
CDS TCA 72 bp TGTTCCCATCTGAAACAGATGCAACCCATTGGCATCTaGCAGGAACCGAAGCTCTCGATCCAGAAGATATTC +
Preference number: 6 (lower is better)
Translates to: CSHLKQMQPIGI*QEPKLSIQKIF
Trigger: GAATATCTTCTGGATCGAGAGCTTCGGTTCCTGTCAGATGCCAATGGGTTGCATCTGTTTCAGATGGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000512928.1
CDS TCA 72 bp CTGCTCAGGAATGCAGTCCATTACTGTACCTCGCTTTaGGGCGCTGAATTATCCATCAGCATCACATGGATT +
Preference number: 6 (lower is better)
Translates to: LLRNAVHYCTSL*GAELSISITWI
Trigger: AATCCATGTGATGCTGATGGATAATTCAGCGCCTCAAAGCGAGGTACAGTAATGGACTGCATTCCTGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512928.1
CDS CCA 72 bp CAGGAACCGAAGCTCTCGATCCAGAAGATATTCCACTaGAACCACAGAACCCAAACCCAGTTTATCTACAAG +
Preference number: 6 (lower is better)
Translates to: QEPKLSIQKIFH*NHRTQTQFIYK
Trigger: CTTGTAGATAAACTGGGTTTGGGTTCTGTGGTTCCAGTGGAATATCTTCTGGATCGAGAGCTTCGGTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314358.10
ENST00000510866.5
ENST00000512928.1
CDS CCA 72 bp GCAGGAGCAACGCAAACTAACACACACCTAAACTCCTaGGACCTAAACAGAAGTAAAATGAGACAACAGGAA +
Preference number: 6 (lower is better)
Translates to: AGATQTNTHLNS*DLNRSKMRQQE
Trigger: TTCCTGTTGTCTCATTTTACTTCTGTTTAGGTCCCAGGAGTTTAGGTGTGTGTTAGTTTGCGTTGCTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504095.1
CDS CAA 72 bp GATAACTTCCTCAGCATGAACTTTTACCCAGGAGTGTaGCTTCCAGTTACAGCCATCAAATTCTACAAAGAT +
Preference number: 6 (lower is better)
Translates to: DNFLSMNFYPGV*LPVTAIKFYKD
Trigger: ATCTTTGTAGAATTTGATGGCTGTAACTGGAAGCAACACTCCTGGGTAAAAGTTCATGCTGAGGAAGTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314358.10
ENST00000510866.5
CDS TCA 72 bp ATCACTGAACTAGATATGAAAGCTACTTACTGCATATaGTCTCGAAACCATCCCAGAAATCCCGAACTTTCA +
Preference number: 6 (lower is better)
Translates to: ITELDMKATYCI*SRNHPRNPELS
Trigger: TGAAAGTTCGGGATTTCTGGGATGGTTTCGAGATCATATGCAGTAAGTAGCTTTCATATCTAGTTCAGTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505756.1
CDS TCA 72 bp GGGCGTATAGATGCTTATTTTCCAGTCTGCTATCACTaGACTAGATATGAAAGCTACTTACTGCATATGATC +
Preference number: 6 (lower is better)
Translates to: GRIDAYFPVCYH*TRYESYLLHMI
Trigger: GATCATATGCAGTAAGTAGCTTTCATATCTAGTTCAGTGATAGCAGACTGGAAAATAAGCATCTATACGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505756.1