RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KDM3A (Homo sapiens)

Ensembl gene IDs: ENSG00000115548

Ensembl transcript IDs: ENST00000312912.10, ENST00000409064.5, ENST00000409556.5, ENST00000427678.1, ENST00000441719.5, ENST00000452034.5, ENST00000463013.1, ENST00000466058.1, ENST00000470160.1, ENST00000483866.1, ENST00000485171.1, ENST00000488971.1, ENST00000491383.5, ENST00000498528.1

Found 808 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTGCCAGCTCTGTCCCCACTCCCGAAGGCAGTCCCTCTTCACACTaGTATTGGTATATTTCCATGGAGCTGGTGCTCCGTCTCAGATGG +
Preference number: 1 (lower is better)
Translates to: SASSVPTPEGSPSSH*YWYISMELVLRLRW
Trigger: CCATCTGAGACGGAGCACCAGCTCCATGGAAATATACCAATAGCAGTGTGAAGAGGGACTGCCTTCGGGAGTGGGGACAGAGCTGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 90 bp CTGATTACTGGAACGAGGGGGAGAAGGGACAGCAAGACGTACATGTaGTGGTGGGGAGGAGAGGGATGCCACCAAGGAGAGACATATGAG +
Preference number: 1 (lower is better)
Translates to: LITGTRGRRDSKTYM*WWGGEGCHQGETYE
Trigger: CTCATATGTCTCTCCTTGGTGGCATCCCTCTCCTCCCCACCATCACATGTACGTCTTGCTGTCCCTTCTCCCCCTCGTTCCAGTAATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 90 bp CGCTGGAAGGAGTGTCCAGTGACACCAGTCACCAGTGAAACAGGGTaGCTGACCCCACCGTACTTGAGCCTGTTATTGCCAAGCAGGAAT +
Preference number: 1 (lower is better)
Translates to: RWKECPVTPVTSETG*LTPPYLSLLLPSRN
Trigger: ATTCCTGCTTGGCAATAACAGGCTCAAGTACGGTGGGGTCAGTCACCCTGTTTCACTGGTGACTGGTGTCACTGGACACTCCTTCCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 90 bp AGAAGACAAGCGCTGGAAGGAGTGTCCAGTGACACCAGTCACCAGTaGAACAGGGTGACTGACCCCACCGTACTTGAGCCTGTTATTGCC +
Preference number: 1 (lower is better)
Translates to: RRQALEGVSSDTSHQ*NRVTDPTVLEPVIA
Trigger: GGCAATAACAGGCTCAAGTACGGTGGGGTCAGTCACCCTGTTTCACTGGTGACTGGTGTCACTGGACACTCCTTCCAGCGCTTGTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 90 bp GGTGGGGTTGTCAGAAGTCTGCTAAAGGAACTGAGAAGGGGGTTCTaGATAGGGCAGGAGGATGGGAGGCCTACATTACCTGCCCTTGTT +
Preference number: 1 (lower is better)
Translates to: GGVVRSLLKELRRGF*IGQEDGRPTLPALV
Trigger: AACAAGGGCAGGTAATGTAGGCCTCCCATCCTCCTGCCCTATTCAGAACCCCCTTCTCAGTTCCTTTAGCAGACTTCTGACAACCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CCA 90 bp CTCCCGAAGGCAGTCCCTCTTCACACTGCTATTGGTATATTTCCATaGAGCTGGTGCTCCGTCTCAGATGGTGATGTGACAGTTTCGGCT +
Preference number: 1 (lower is better)
Translates to: LPKAVPLHTAIGIFP*SWCSVSDGDVTVSA
Trigger: AGCCGAAACTGTCACATCACCATCTGAGACGGAGCACCAGCTCCATGGAAATATACCAATAGCAGTGTGAAGAGGGACTGCCTTCGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CCA 90 bp ACCCTCACTTCCTCTGCTGAAGTTTACCATAGGAATCACCAAGCCTaGATGCCCTCGTCAAAAACCCAACAGGGACTGGTAGGAAGCAAC +
Preference number: 1 (lower is better)
Translates to: TLTSSAEVYHRNHQA*MPSSKTQQGLVGSN
Trigger: GTTGCTTCCTACCAGTCCCTGTTGGGTTTTTGACGAGGGCATCCAGGCTTGGTGATTCCTATGGTAAACTTCAGCAGAGGAAGTGAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 90 bp TTGGTATATTTCCATGGAGCTGGTGCTCCGTCTCAGATGGTGATGTaGCAGTTTCGGCTTAGTTCTCTGAGCTCCCAAAGCACCTCCAAC +
Preference number: 1 (lower is better)
Translates to: LVYFHGAGAPSQMVM*QFRLSSLSSQSTSN
Trigger: GTTGGAGGTGCTTTGGGAGCTCAGAGAACTAAGCCGAAACTGTCACATCACCATCTGAGACGGAGCACCAGCTCCATGGAAATATACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 90 bp TCACCTCTCCTAGTAAGATCTCATTACTTACAGCAAGACGGACTGTaGAGAAGACAAGCGCTGGAAGGAGTGTCCAGTGACACCAGTCAC +
Preference number: 1 (lower is better)
Translates to: SPLLVRSHYLQQDGL*RRQALEGVSSDTSH
Trigger: GTGACTGGTGTCACTGGACACTCCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTTACTAGGAGAGGTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 90 bp GGGCCAGCTAACAGGTTACGAATGTTCATATCCAAGACTCATGAATaGCTGAAGAATATCAGCCAAAGACACCTGAGTTGCAACCGGCAG +
Preference number: 1 (lower is better)
Translates to: GPANRLRMFISKTHE*LKNISQRHLSCNRQ
Trigger: CTGCCGGTTGCAACTCAGGTGTCTTTGGCTGATATTCTTCAGTCATTCATGAGTCTTGGATATGAACATTCGTAACCTGTTAGCTGGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 90 bp CTCACTCAGAACATGGTCACTCAGGGCCAAGGATACATGAACGTCTaGAGTGCTCAGATTCTCAAGGCAATAAAAACAGATATATGCTGG +
Preference number: 1 (lower is better)
Translates to: LTQNMVTQGQGYMNV*SAQILKAIKTDICW
Trigger: CCAGCATATATCTGTTTTTATTGCCTTGAGAATCTGAGCACTTCAGACGTTCATGTATCCTTGGCCCTGAGTGACCATGTTCTGAGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR GCA 90 bp TCTTCCAAATCCCTGCAACCCTTGCTAGTAACAAGTAGGACCACTTaGTACATGACAGTGGACAAAACCAAACTTAGCAACTCACTCAGA +
Preference number: 1 (lower is better)
Translates to: SSKSLQPLLVTSRTT*YMTVDKTKLSNSLR
Trigger: TCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTGTCATGTAGCAAGTGGTCCTACTTGTTACTAGCAAGGGTTGCAGGGATTTGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 90 bp GCTGGTACATATCCCTATTACTCTATGTACCATGCTGGTTTAAAATaGCCAGTTTGTGCCTGTCTCCCCTATGAACTCATCCCAGAATTC +
Preference number: 1 (lower is better)
Translates to: AGTYPYYSMYHAGLK*PVCACLPYELIPEF
Trigger: GAATTCTGGGATGAGTTCATAGGGGAGACAGGCACAAACTGGTCATTTTAAACCAGCATGGTACATAGAGTAATAGGGATATGTACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR GCA 90 bp TCAGAACATGGTCACTCAGGGCCAAGGATACATGAACGTCTGAAGTaGTCAGATTCTCAAGGCAATAAAAACAGATATATGCTGGGAGAT +
Preference number: 1 (lower is better)
Translates to: SEHGHSGPRIHERLK*SDSQGNKNRYMLGD
Trigger: ATCTCCCAGCATATATCTGTTTTTATTGCCTTGAGAATCTGAGCACTTCAGACGTTCATGTATCCTTGGCCCTGAGTGACCATGTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CCA 90 bp AATTCTTGTCCAAGAGCAGAGTGTTCCTTTAGCAAAGACCCTATCTaGCCAAACAGAGAAGCCAGAGATCCAGAAAACAGAACCAAAACA +
Preference number: 1 (lower is better)
Translates to: NSCPRAECSFSKDPI*PNREARDPENRTKT
Trigger: TGTTTTGGTTCTGTTTTCTGGATCTCTGGCTTCTCTGTTTGGCCAGATAGGGTCTTTGCTAAAGGAACACTCTGCTCTTGGACAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 90 bp GTAACACAACTAGCACGTGGAAGGAAAAGAACTCAAATTCAGTTCTaGCTCCAAATATTACAAGTCTTCTGCTCTCCCATCCTGCCTTAT +
Preference number: 1 (lower is better)
Translates to: VTQLARGRKRTQIQF*LQILQVFCSPILPY
Trigger: ATAAGGCAGGATGGGAGAGCAGAAGACTTGTAATATTTGGAGTCAGAACTGAATTTGAGTTCTTTTCCTTCCACGTGCTAGTTGTGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR GCA 90 bp CCTGTGATGATTTCATTGGTCCTACAATTAACTAGGTCTACTTCCTaGTCACCAAACTCTTTCCTGAAGGATTCAGGTTTCCAAAGTTCA +
Preference number: 1 (lower is better)
Translates to: PVMISLVLQLTRSTS*SPNSFLKDSGFQSS
Trigger: TGAACTTTGGAAACCTGAATCCTTCAGGAAAGAGTTTGGTGAGCAGGAAGTAGACCTAGTTAATTGTAGGACCAATGAAATCATCACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 90 bp CCCTGTTGTGGTCCAGGCCCTCTCTTTACATGTGATGTAATTCTGTaGTGCCCAATCATCAATATTGCTTCTTATTTCTATATTACTGAT +
Preference number: 1 (lower is better)
Translates to: PCCGPGPLFTCDVIL*CPIINIASYFYITD
Trigger: ATCAGTAATATAGAAATAAGAAGCAATATTGATGATTGGGCATCACAGAATTACATCACATGTAAAGAGAGGGCCTGGACCACAACAGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR GCA 90 bp GTGACACCACGCGGCCCTAGCCCACCTAGAACTGCCTTCAGCACAGGCTTTTCAAGGCAGGCTTCATGCTaGCGGCTGGCTTGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: VTPRGPSPPRTAFSTGFSRQASC*RLAWRL
Trigger: CAGCCTCCAAGCCAGCCGGCAGCATGAAGCCTGCCT...TGAAAAGCCTGTGCTGAAGGCAGTTCTAGGTGGGCTAGGGCCGCGTGGTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp GAGCTCCCAAAGCACCTCCAACCTTCACCATTCATCTGCTACACACCCTTGCTCCTGAGAAGGGGGTTCTaGATAGGGCAGGAGGATGGG +
Preference number: 2 (lower is better)
Translates to: ELPKHLQPSPFICYTPLLLRRGF*IGQEDG
Trigger: CCCATCCTCCTGCCCTATTCAGAACCCCCTTCTCAG...GAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTGCTTTGGGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCCACCTGGGGACTATGTaGCACCACGCGGCCCTAGCC +
Preference number: 2 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGHLGTM*HHAALA
Trigger: GGCTAGGGCCGCGTGGTGTCACATAGTCCCCAGGTG...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CCA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCCTTCATGCTGCCGGCTaGCTTGGAGGCTGCTTCCCC +
Preference number: 2 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGLHAAG*LGGCFP
Trigger: GGGGAAGCAGCCTCCAAGCCAGCCGGCAGCATGAAG...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CCA 90 bp GTGACACCACGCGGCCCTAGCCCACCTAGAACTGCCTTCAGCACAGGCTTTTCAAGTTGCTCTTATTGTTaGGGTCTTGCAAGCACAGCA +
Preference number: 2 (lower is better)
Translates to: VTPRGPSPPRTAFSTGFSSCSYC*GLASTA
Trigger: TGCTGTGCTTGCAAGACCCCAACAATAAGAGCAACT...TGAAAAGCCTGTGCTGAAGGCAGTTCTAGGTGGGCTAGGGCCGCGTGGTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CCA 90 bp GAGCTCCCAAAGCACCTCCAACCTTCACCATTCATCTGCTACACACCCTTGCTCAATAGGGCAGGAGGATaGGAGGCCTACATTACCTGC +
Preference number: 2 (lower is better)
Translates to: ELPKHLQPSPFICYTPLLNRAGG*EAYITC
Trigger: GCAGGTAATGTAGGCCTCCCATCCTCCTGCCCTATT...GAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTGCTTTGGGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp GAGTGTTCCTTTAGCAAAGACCCTATCTGGCCAAACAGAGAAGCCAGAGATCCATGCTGGCTCCAACACTaGGGGATTCTGCTGGAGCAC +
Preference number: 2 (lower is better)
Translates to: ECSFSKDPIWPNREARDPCWLQH*GILLEH
Trigger: GTGCTCCAGCAGAATCCCTCAGTGTTGGAGCCAGCA...TGGATCTCTGGCTTCTCTGTTTGGCCAGATAGGGTCTTTGCTAAAGGAACACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCGACACCAGTCACCAGTaGAACAGGGTGACTGACCCC +
Preference number: 2 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGDTSHQ*NRVTDP
Trigger: GGGGTCAGTCACCCTGTTTCACTGGTGACTGGTGTC...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR GCA 90 bp GAGCTCCCAAAGCACCTCCAACCTTCACCATTCATCTGCTACACACCCTTGCTCAACACTGAGGGATTCTaGTGGAGCACTGCACCAAGA +
Preference number: 2 (lower is better)
Translates to: ELPKHLQPSPFICYTPLLNTEGF*WSTAPR
Trigger: TCTTGGTGCAGTGCTCCAGCAGAATCCCTCAGTGTT...GAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTGCTTTGGGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp GTGACACCACGCGGCCCTAGCCCACCTAGAACTGCCTTCAGCACAGGCTTTTCATTGATGGTTAGTCCTTaGGGCCTCTTAGATAAATCA +
Preference number: 2 (lower is better)
Translates to: VTPRGPSPPRTAFSTGFSLMVSP*GLLDKS
Trigger: TGATTTATCTAAGAGGCCTCAAGGACTAACCATCAA...TGAAAAGCCTGTGCTGAAGGCAGTTCTAGGTGGGCTAGGGCCGCGTGGTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCAACCAGTGAAACAGGGTaGCTGACCCCACCGTACTTG +
Preference number: 2 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPTSETG*LTPPYL
Trigger: CAAGTACGGTGGGGTCAGTCACCCTGTTTCACTGGT...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CCA 90 bp GAGCTCCCAAAGCACCTCCAACCTTCACCATTCATCTGCTACACACCCTTGCTCTTCACCAGCCCCTGCTaGTACATATCCCTATTACTC +
Preference number: 2 (lower is better)
Translates to: ELPKHLQPSPFICYTPLLFTSPC*YISLLL
Trigger: GAGTAATAGGGATATGTACCAGCAGGGGCTGGTGAA...GAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTGCTTTGGGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR GCA 90 bp GAGTGTTCCTTTAGCAAAGACCCTATCTGGCCAAACAGAGAAGCCAGAGATCCAGGGTATCCCCACAGCTaGAGTAATCCCGCACTAGTA +
Preference number: 2 (lower is better)
Translates to: ECSFSKDPIWPNREARDPGYPHS*SNPALV
Trigger: TACTAGTGCGGGATTACTGCAGCTGTGGGGATACCC...TGGATCTCTGGCTTCTCTGTTTGGCCAGATAGGGTCTTTGCTAAAGGAACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CCA 90 bp GTGACACCACGCGGCCCTAGCCCACCTAGAACTGCCTTCAGCACAGGCTTTTCAAACACAACTAGCACGTaGAAGGAAAAGAACTCAAAT +
Preference number: 2 (lower is better)
Translates to: VTPRGPSPPRTAFSTGFSNTTST*KEKNSN
Trigger: ATTTGAGTTCTTTTCCTTCCACGTGCTAGTTGTGTT...TGAAAAGCCTGTGCTGAAGGCAGTTCTAGGTGGGCTAGGGCCGCGTGGTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CAA 90 bp CTCCCAAAGCACCTCCAACCTTCACCATTCATCTGCTACACACCCTaGCTCTCAAACTACATGGGTAAGCATCTAGGAGAAAGGATCACC +
Preference number: 2 (lower is better)
Translates to: LPKHLQPSPFICYTP*LSNYMGKHLGERIT
Trigger: GGTGATCCTTTCTCCTAGATGCTTACCCATGTAGTTTGAGAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTGCTTTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGCACAATGCGGCATACTaGTTACTGGAACGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: KISLLTARRTVKKTSAGRHNAAY*LLERGG
Trigger: TCCCCCTCGTTCCAGTAATCAGTATGCCGCATTGTG...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCTGCCTGTCTCCCCTATaGACTCATCCCAGAATTCAG +
Preference number: 2 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGCLSPL*THPRIQ
Trigger: CTGAATTCTGGGATGAGTTCATAGGGGAGACAGGCA...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATAACAACACTGCCCTTTaGAGCAGGCACCTGGGGACT +
Preference number: 2 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHNNTAL*SRHLGT
Trigger: AGTCCCCAGGTGCCTGCTTCAAAGGGCAGTGTTGTT...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGACAGCAAGACGGACTGTaGAGAAGACAAGCGCTGGAA +
Preference number: 2 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRQQDGL*RRQALE
Trigger: TTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTG...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGACGGCATACTGATTACTaGAACGAGGGGGAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRRHTDY*NEGEKG
Trigger: TCCCTTCTCCCCCTCGTTCCAGTAATCAGTATGCCG...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGAACTGAGGGATTCTGCTaGAGCACTGCACCAAGAGTC +
Preference number: 2 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRTEGFC*STAPRV
Trigger: GACTCTTGGTGCAGTGCTCCAGCAGAATCCCTCAGT...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CCA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGGAATCACCAAGCCTaGATGCCCTCGTCAAAAACC +
Preference number: 2 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGRNHQA*MPSSKT
Trigger: GGTTTTTGACGAGGGCATCCAGGCTTGGTGATTCCT...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCCCTTGTTTTCCTTGTTaGCATTCCCGCTGGTTAGGT +
Preference number: 2 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGPCFPC*HSRWLG
Trigger: ACCTAACCAGCGGGAATGTCAACAAGGAAAACAAGG...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR GCA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCCCTTCACCATTCATCTaGTACACACCCTTGCTCTCA +
Preference number: 2 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGPSPFI*YTPLLS
Trigger: TGAGAGCAAGGGTGTGTAGCAGATGAATGGTGAAGG...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CCA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGTTCAAACCCCTGTTGTaGTCCAGGCCCTCTCTTTAC +
Preference number: 2 (lower is better)
Translates to: KISLLTARRTVKKTSAGRFKPLL*SRPSLY
Trigger: GTAAAGAGAGGGCCTGGACCACAACAGGGGTTTGAA...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CCA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTAGGAGGGGGAAAGCCTaGGGTGGGGTTGTCAGAAGT +
Preference number: 2 (lower is better)
Translates to: DKQERKPADKLYSAHHFVRRGKA*GGVVRS
Trigger: ACTTCTGACAACCCCACCCCAGGCTTTCCCCCTCCT...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CAA 90 bp GCCAACTACAGGGGAAACCTAGAATCTTCCAAATCCCTGCAACCCTaGCTAGTAACAAGTAGGACCACTTGCTACATGACAGTGGACAAA +
Preference number: 2 (lower is better)
Translates to: ANYRGNLESSKSLQP*LVTSRTTCYMTVDK
Trigger: TTTGTCCACTGTCATGTAGCAAGTGGTCCTACTTGTTACTAGCAAGGGTTGCAGGGATTTGGAAGATTCTAGGTTTCCCCTGTAGTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTGGACCCTAAGGGATaGGGGAGGGGACTCAGACAC +
Preference number: 2 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVLDPKG*GRGLRH
Trigger: GTGTCTGAGTCCCCTCCCTCATCCCTTAGGGTCCAG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
3UTR-3UTR TCA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCTCTCAGATGGTGATGTaGCAGTTTCGGCTTAGTTCT +
Preference number: 2 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGSQMVM*QFRLSS
Trigger: AGAACTAAGCCGAAACTGTCACATCACCATCTGAGA...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR GCA 90 bp GAGCTCCCAAAGCACCTCCAACCTTCACCATTCATCTGCTACACACCCTTGCTCCCATACAATAAGAACTaGAACATTAGCTGTCACTTC +
Preference number: 2 (lower is better)
Translates to: ELPKHLQPSPFICYTPLLPYNKN*NISCHF
Trigger: GAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGG...GAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTGCTTTGGGAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR GCA 90 bp AAGAGATTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGGGACTGTGCTGGATTTaGTTAAAGGTGGGAGGGGTG +
Preference number: 2 (lower is better)
Translates to: KRFRRKPELLLLTGVKIVGLCWI*LKVGGV
Trigger: CACCCCTCCCACCTTTAAGCAAATCCAGCACAGTCC...CACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR GCA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCAATATATGTGCCACAGTaGTCCTGGCTTCTCTTTTCC +
Preference number: 2 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPIYVPQ*SWLLFS
Trigger: GGAAAAGAGAAGCCAGGAGCACTGTGGCACATATAT...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR GCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGATTTGCAGCATATATGTaGCACAGTGCTCCTGGCTTC +
Preference number: 2 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRFAAYM*HSAPGF
Trigger: GAAGCCAGGAGCACTGTGGCACATATATGCTGCAAA...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CCA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCTATGGAGGACTGTGCTaGATTTGCTTAAAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGYGGLC*ICLKVG
Trigger: TCCCACCTTTAAGCAAATCCAGCACAGTCCTCCATA...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CCA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCAGTGCTGTTAAACGTATaGAGGACTGTGCTGGATTTG +
Preference number: 2 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPVLLNV*RTVLDL
Trigger: CAAATCCAGCACAGTCCTCCATACGTTTAACAGCAC...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCACTGGACCCTAAGGGATaGGGGAGGGGACTCAGACAC +
Preference number: 2 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPLDPKG*GRGLRH
Trigger: GTGTCTGAGTCCCCTCCCTCATCCCTTAGGGTCCAG...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
3UTR-3UTR TCA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCATCTACGAAAGTAATGTaGAAAGTCAGAACGGGTCTC +
Preference number: 2 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPSTKVM*KVRTGL
Trigger: GAGACCCGTTCTGACTTTTCACATTACTTTCGTAGA...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCAGTCCACAGGAATCCTaGCTGAAGAGTTTGAACAGC +
Preference number: 2 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSSPQES*LKSLNS
Trigger: GCTGTTCAAACTCTTCAGGCAGGATTCCTGTGGACT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
3UTR CAA 90 bp TCCCCTAGCCAAGCCAGTCAGTTCACCACATGTAGTAACATAATATaGCTATTCCTTATGCCTCTGTTCACACATGCCATAAGCAGCACA +
Preference number: 2 (lower is better)
Translates to: SPSQASQFTTCSNII*LFLMPLFTHAISST
Trigger: TGTGCTGCTTATGGCATGTGTGAACAGAGGCATAAGGAATAGCAATATTATGTTACTACATGTGGTGAACTGACTGGCTTGGCTAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR GCA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGCAGCTGAAGAATAACTaGAGGTATTGTTCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: KISLLTARRTVKKTSAGRQLKNN*RYCSRA
Trigger: AGCTCTGGAACAATACCTGCAGTTATTCTTCAGCTG...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR GCA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTATCACCAAGCCTGGATaGCCTCGTCAAAAACCCAAC +
Preference number: 2 (lower is better)
Translates to: DKQERKPADKLYSAHHFVITKPG*PRQKPN
Trigger: GTTGGGTTTTTGACGAGGGCATCCAGGCTTGGTGAT...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CAA 90 bp GGTGTCAAAATTGTGCTGTTAAACGTATGGAGGACTGTGCTGGATTaGCTTAAAGGTGGGAGGGGTGGAAGGCATTTGATTTCATTCTTT +
Preference number: 2 (lower is better)
Translates to: GVKIVLLNVWRTVLD*LKGGRGGRHLISFF
Trigger: AAAGAATGAAATCAAATGCCTTCCACCCCTCCCACCTTTAAGCAAATCCAGCACAGTCCTCCATACGTTTAACAGCACAATTTTGACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp AAGAGATTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGGTGCTTTTCCAGGAATaGTCTGTGTGGGCATTAAGT +
Preference number: 2 (lower is better)
Translates to: KRFRRKPELLLLTGVKIVVLFQE*SVWALS
Trigger: ACTTAATGCCCACACAGATCATTCCTGGAAAAGCAC...CACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTTTGAATTGCCTGTTTaGACAAGGGCAGTTTGCCTT +
Preference number: 2 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSFELPV*TRAVCL
Trigger: AAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR GCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGAGAAGTCGTCTTATTTTaGACCAAAGAGGCAAAGATG +
Preference number: 2 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGREVVLF*TKEAKM
Trigger: CATCTTTGCCTCTTTGGTGCAAAATAAGACGACTTC...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CAA 90 bp CCTGTAGAAGAATTCAAGAGATTCCGGAGGAAACCAGAATTGTTGTaGCTTACGGGTGTCAAAATTGTGCTGTTAAACGTATGGAGGACT +
Preference number: 2 (lower is better)
Translates to: PVEEFKRFRRKPELL*LTGVKIVLLNVWRT
Trigger: AGTCCTCCATACGTTTAACAGCACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTTGAATTCTTCTACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCAGTTGTCCAAACAGCTaGAGAATAACTGCAGGTATT +
Preference number: 2 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSSCPNS*RITAGI
Trigger: AATACCTGCAGTTATTCTTCAGCTGTTTGGACAACT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
3UTR-3UTR TCA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATAGTTGTCCAAACAGCTaGAGAATAACTGCAGGTATT +
Preference number: 2 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHSCPNS*RITAGI
Trigger: AATACCTGCAGTTATTCTTCAGCTGTTTGGACAACT...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGGCACCTGCAAATAACTaGTTTGTAGTAACTGTTCTT +
Preference number: 2 (lower is better)
Translates to: KISLLTARRTVKKTSAGRAPANN*FVVTVL
Trigger: AAGAACAGTTACTACAAATCAGTTATTTGCAGGTGC...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTTCGCTCTTACAGAATaGACAATGTCTCCAACATCA +
Preference number: 2 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSFALTE*TMSPTS
Trigger: TGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATCAGCTGAAGAATAACTaGAGGTATTGTTCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNQLKNN*RYCSRA
Trigger: AGCTCTGGAACAATACCTGCAGTTATTCTTCAGCTG...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
3UTR-3UTR GCA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCATTACTCTATGTACCATaGTGGTTTAAAATGACCAGT +
Preference number: 2 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPLLYVP*WFKMTS
Trigger: ACTGGTCATTTTAAACCAGCATGGTACATAGAGTAA...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR GCA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTACGTATGGAGGACTGTaGTGGATTTGCTTAAAGGTG +
Preference number: 2 (lower is better)
Translates to: DKQERKPADKLYSAHHFVTYGGL*WICLKV
Trigger: CACCTTTAAGCAAATCCAGCACAGTCCTCCATACGT...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTACCTCCATTGCTCTTCTaGACCCTAAGGGATGAGGGA +
Preference number: 2 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLPPLLF*TLRDEG
Trigger: TCCCTCATCCCTTAGGGTCCAGAAGAGCAATGGAGG...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
3UTR CAA 90 bp TTTCCTGTAGAAGAATTCAAGAGATTCCGGAGGAAACCAGAATTGTaGTTGCTTACGGGTGTCAAAATTGTGCTGTTAAACGTATGGAGG +
Preference number: 2 (lower is better)
Translates to: FPVEEFKRFRRKPEL*LLTGVKIVLLNVWR
Trigger: CCTCCATACGTTTAACAGCACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTTGAATTCTTCTACAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CAA 90 bp GTCTTTCCTGTAGAAGAATTCAAGAGATTCCGGAGGAAACCAGAATaGTTGTTGCTTACGGGTGTCAAAATTGTGCTGTTAAACGTATGG +
Preference number: 2 (lower is better)
Translates to: VFPVEEFKRFRRKPE*LLLTGVKIVLLNVW
Trigger: CCATACGTTTAACAGCACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTTGAATTCTTCTACAGGAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATAGTTGTCCAAACAGCTaGAGAATAACTGCAGGTATT +
Preference number: 2 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNSCPNS*RITAGI
Trigger: AATACCTGCAGTTATTCTTCAGCTGTTTGGACAACT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
3UTR-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGCTGATACGAGGTTTTaGTTTTACAGCCTGGTAAAA +
Preference number: 2 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNADTRF*FYSLVK
Trigger: TTTTACCAGGCTGTAAAAGCAAAACCTCGTATCAGC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
3UTR-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGACTCTGTCTCCACATaGTTCAAGAAACCCGCCAAA +
Preference number: 2 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVDSVST*FKKPAK
Trigger: TTTGGCGGGTTTCTTGAAGCATGTGGAGACAGAGTC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAGTCCACAGGAATCCTaGCTGAAGAGTTTGAACAGC +
Preference number: 2 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPSPQES*LKSLNS
Trigger: GCTGTTCAAACTCTTCAGGCAGGATTCCTGTGGACT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
3UTR-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAGTCCACAGGAATCCTaGCTGAAGAGTTTGAACAGC +
Preference number: 2 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLSPQES*LKSLNS
Trigger: GCTGTTCAAACTCTTCAGGCAGGATTCCTGTGGACT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
3UTR-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCAGCTGAAGAATAACTaGAGGTATTGTTCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVQLKNN*RYCSRA
Trigger: AGCTCTGGAACAATACCTGCAGTTATTCTTCAGCTG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
3UTR-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTCTGGTTCATGTATCTaGCTCTTCACACATTTTAGC +
Preference number: 2 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVSGSCI*LFTHFS
Trigger: GCTAAAATGTGTGAAGAGTCAGATACATGAACCAGA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTACAGCTGAAGAATAACTaGAGGTATTGTTCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLQLKNN*RYCSRA
Trigger: AGCTCTGGAACAATACCTGCAGTTATTCTTCAGCTG...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
3UTR-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGCTGATACGAGGTTTTaGTTTTACAGCCTGGTAAAA +
Preference number: 2 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLADTRF*FYSLVK
Trigger: TTTTACCAGGCTGTAAAAGCAAAACCTCGTATCAGC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
3UTR-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTACCATACAATAAGAACTaGAACATTAGCTGTCACTTC +
Preference number: 2 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLPYNKN*NISCHF
Trigger: GAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGG...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
3UTR-3UTR CAA 90 bp GTGACACCACGCGGCCCTAGCCCACCTAGAACTGCCTTCAGCACAGGCTTTTCACTTATTGTTGGGGTCTaGCAAGCACAGCAAGCGATT +
Preference number: 3 (lower is better)
Translates to: VTPRGPSPPRTAFSTGFSLIVGV*QAQQAI
Trigger: AATCGCTTGCTGTGCTTGCAAGACCCCAACAATAAG...TGAAAAGCCTGTGCTGAAGGCAGTTCTAGGTGGGCTAGGGCCGCGTGGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 72 bp TTCCATGGAGCTGGTGCTCCGTCTCAGATGGTGATGTaGCAGTTTCGGCTTAGTTCTCTGAGCTCCCAAAGC +
Preference number: 3 (lower is better)
Translates to: FHGAGAPSQMVM*QFRLSSLSSQS
Trigger: GCTTTGGGAGCTCAGAGAACTAAGCCGAAACTGTCACATCACCATCTGAGACGGAGCACCAGCTCCATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CAA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGACAACAACACTGCCCTTaGAAGCAGGCACCTGGGGAC +
Preference number: 3 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRQQHCP*KQAPGD
Trigger: GTCCCCAGGTGCCTGCTTCAAAGGGCAGTGTTGTTG...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 72 bp GTCAGAAGTCTGCTAAAGGAACTGAGAAGGGGGTTCTaGATAGGGCAGGAGGATGGGAGGCCTACATTACCT +
Preference number: 3 (lower is better)
Translates to: VRSLLKELRRGF*IGQEDGRPTLP
Trigger: AGGTAATGTAGGCCTCCCATCCTCCTGCCCTATTCAGAACCCCCTTCTCAGTTCCTTTAGCAGACTTCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CCA 72 bp ACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTaGAAGGAGTGTCCAGTGACACCAGTCACCAGTGAA +
Preference number: 3 (lower is better)
Translates to: TYSKTDCEEDKR*KECPVTPVTSE
Trigger: TTCACTGGTGACTGGTGTCACTGGACACTCCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CCA 72 bp TCCTCTGCTGAAGTTTACCATAGGAATCACCAAGCCTaGATGCCCTCGTCAAAAACCCAACAGGGACTGGTA +
Preference number: 3 (lower is better)
Translates to: SSAEVYHRNHQA*MPSSKTQQGLV
Trigger: TACCAGTCCCTGTTGGGTTTTTGACGAGGGCATCCAGGCTTGGTGATTCCTATGGTAAACTTCAGCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CCA 72 bp GCAGTCCCTCTTCACACTGCTATTGGTATATTTCCATaGAGCTGGTGCTCCGTCTCAGATGGTGATGTGACA +
Preference number: 3 (lower is better)
Translates to: AVPLHTAIGIFP*SWCSVSDGDVT
Trigger: TGTCACATCACCATCTGAGACGGAGCACCAGCTCCATGGAAATATACCAATAGCAGTGTGAAGAGGGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CAA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCCAGTTGCTCTTATTGTaGGGGTCTTGCAAGCACAGC +
Preference number: 3 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGQLLLL*GSCKHS
Trigger: GCTGTGCTTGCAAGACCCCAACAATAAGAGCAACTG...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CAA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATCTGACCCCACCGTACTaGAGCCTGTTATTGCCAAGC +
Preference number: 3 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHLTPPY*SLLLPS
Trigger: GCTTGGCAATAACAGGCTCAAGTACGGTGGGGTCAG...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CAA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATGTTTGCCATCTCGCCTaGTGTACTCGGGCAGTGGAA +
Preference number: 3 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHVCHLA*CTRAVE
Trigger: TTCCACTGCCCGAGTACACAAGGCGAGATGGCAAAC...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR GCA 72 bp CTTCACACTGCTATTGGTATATTTCCATGGAGCTGGTaGTCCGTCTCAGATGGTGATGTGACAGTTTCGGCT +
Preference number: 3 (lower is better)
Translates to: LHTAIGIFPWSW*SVSDGDVTVSA
Trigger: AGCCGAAACTGTCACATCACCATCTGAGACGGAGCACCAGCTCCATGGAAATATACCAATAGCAGTGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CCA 72 bp CCTCTTCACACTGCTATTGGTATATTTCCATGGAGCTaGTGCTCCGTCTCAGATGGTGATGTGACAGTTTCG +
Preference number: 3 (lower is better)
Translates to: PLHTAIGIFPWS*CSVSDGDVTVS
Trigger: CGAAACTGTCACATCACCATCTGAGACGGAGCACCAGCTCCATGGAAATATACCAATAGCAGTGTGAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CAA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCATCTCTCTCTTTCCACTaGATAGCTATCCCCAGGTTC +
Preference number: 3 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPSLSFH*IAIPRF
Trigger: GAACCTGGGGATAGCTATCAAGTGGAAAGAGAGAGA...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CAA 90 bp AAGAGATTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCTGTCACTTCCTCCATaGCTCTTCTGGACCCTAAGG +
Preference number: 3 (lower is better)
Translates to: KRFRRKPELLLLTGVKIVLSLPP*LFWTLR
Trigger: CCTTAGGGTCCAGAAGAGCAATGGAGGAAGTGACAG...CACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 72 bp CTAGTAAGATCTCATTACTTACAGCAAGACGGACTGTaGAGAAGACAAGCGCTGGAAGGAGTGTCCAGTGAC +
Preference number: 3 (lower is better)
Translates to: LVRSHYLQQDGL*RRQALEGVSSD
Trigger: GTCACTGGACACTCCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTTACTAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CAA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGAGTCAGAATCTCCATCTaGGATGGTCTTAAGGACTTC +
Preference number: 3 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRVRISI*DGLKDF
Trigger: GAAGTCCTTAAGACCATCCAAGATGGAGATTCTGAC...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR GCA 72 bp CCCTGCTGGTACATATCCCTATTACTCTATGTACCATaGTGGTTTAAAATGACCAGTTTGTGCCTGTCTCCC +
Preference number: 3 (lower is better)
Translates to: PCWYISLLLYVP*WFKMTSLCLSP
Trigger: GGGAGACAGGCACAAACTGGTCATTTTAAACCAGCATGGTACATAGAGTAATAGGGATATGTACCAGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CCA 72 bp TTGCTTACGGGTGTCAAAATTGTGCTGTTAAACGTATaGAGGACTGTGCTGGATTTGCTTAAAGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: LLTGVKIVLLNV*RTVLDLLKGGR
Trigger: CCTCCCACCTTTAAGCAAATCCAGCACAGTCCTCCATACGTTTAACAGCACAATTTTGACACCCGTAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CAA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGAGTTTTAGGTCTTCCTTaGAGGCTGGCTTTGAAAAGA +
Preference number: 3 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRVLGLP*RLALKR
Trigger: TCTTTTCAAAGCCAGCCTCAAAGGAAGACCTAAAAC...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CAA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTCGGAGGAAACCAGAATaGTTGTTGCTTACGGGTGTC +
Preference number: 3 (lower is better)
Translates to: DKQERKPADKLYSAHHFVRRKPE*LLLTGV
Trigger: GACACCCGTAAGCAACAACAATTCTGGTTTCCTCCG...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CAA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGACTAAACACATTCCAGTaGCTCTTATTGTTGGGGTCT +
Preference number: 3 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRLNTFQ*LLLLGS
Trigger: AGACCCCAACAATAAGAGCAACTGGAATGTGTTTAG...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CAA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCACCTGTGATGATTTCATaGGTCCTACAATTAACTAGG +
Preference number: 3 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPPVMIS*VLQLTR
Trigger: CCTAGTTAATTGTAGGACCAATGAAATCATCACAGG...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTGTCACTTCCTCCATaGCTCTTCTGGACCCTAAGG +
Preference number: 3 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVLSLPP*LFWTLR
Trigger: CCTTAGGGTCCAGAAGAGCAATGGAGGAAGTGACAG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
3UTR TCA 72 bp TGGTTTAAAATGACCAGTTTGTGCCTGTCTCCCCTATaGACTCATCCCAGAATTCAGGATAGGCACAGAAAA +
Preference number: 3 (lower is better)
Translates to: WFKMTSLCLSPL*THPRIQDRHRK
Trigger: TTTTCTGTGCCTATCCTGAATTCTGGGATGAGTTCATAGGGGAGACAGGCACAAACTGGTCATTTTAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 72 bp AACATGGTCACTCAGGGCCAAGGATACATGAACGTCTaGAGTGCTCAGATTCTCAAGGCAATAAAAACAGAT +
Preference number: 3 (lower is better)
Translates to: NMVTQGQGYMNV*SAQILKAIKTD
Trigger: ATCTGTTTTTATTGCCTTGAGAATCTGAGCACTTCAGACGTTCATGTATCCTTGGCCCTGAGTGACCATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR GCA 72 bp GGTCACTCAGGGCCAAGGATACATGAACGTCTGAAGTaGTCAGATTCTCAAGGCAATAAAAACAGATATATG +
Preference number: 3 (lower is better)
Translates to: GHSGPRIHERLK*SDSQGNKNRYM
Trigger: CATATATCTGTTTTTATTGCCTTGAGAATCTGAGCACTTCAGACGTTCATGTATCCTTGGCCCTGAGTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 72 bp TGTAAATTTCTGATTATTAAACACAATGCGGCATACTaGTTACTGGAACGAGGGGGAGAAGGGACAGCAAGA +
Preference number: 3 (lower is better)
Translates to: CKFLIIKHNAAY*LLERGGEGTAR
Trigger: TCTTGCTGTCCCTTCTCCCCCTCGTTCCAGTAATCAGTATGCCGCATTGTGTTTAATAATCAGAAATTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 72 bp CTAGCACGTGGAAGGAAAAGAACTCAAATTCAGTTCTaGCTCCAAATATTACAAGTCTTCTGCTCTCCCATC +
Preference number: 3 (lower is better)
Translates to: LARGRKRTQIQF*LQILQVFCSPI
Trigger: GATGGGAGAGCAGAAGACTTGTAATATTTGGAGTCAGAACTGAATTTGAGTTCTTTTCCTTCCACGTGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 72 bp TATCCCTATTACTCTATGTACCATGCTGGTTTAAAATaGCCAGTTTGTGCCTGTCTCCCCTATGAACTCATC +
Preference number: 3 (lower is better)
Translates to: YPYYSMYHAGLK*PVCACLPYELI
Trigger: GATGAGTTCATAGGGGAGACAGGCACAAACTGGTCATTTTAAACCAGCATGGTACATAGAGTAATAGGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR-3UTR CAA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTAATTCTCCCAAATTCTaGTCCAAGAGCAGAGTGTTC +
Preference number: 3 (lower is better)
Translates to: DKQERKPADKLYSAHHFVNSPKF*SKSRVF
Trigger: GAACACTCTGCTCTTGGACAAGAATTTGGGAGAATT...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 72 bp TGGCAGAAGACGACTAGTAGTATCAAAGACTTCAGCTaGATGAACCAACAGAAGAATGACGAAGAAAATGTG +
Preference number: 3 (lower is better)
Translates to: WQKTTSSIKDFS*MNQQKNDEENV
Trigger: CACATTTTCTTCGTCATTCTTCTGTTGGTTCATTCAGCTGAAGTCTTTGATACTACTAGTCGTCTTCTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 72 bp GGTCCAGGCCCTCTCTTTACATGTGATGTAATTCTGTaGTGCCCAATCATCAATATTGCTTCTTATTTCTAT +
Preference number: 3 (lower is better)
Translates to: GPGPLFTCDVIL*CPIINIASYFY
Trigger: ATAGAAATAAGAAGCAATATTGATGATTGGGCATCACAGAATTACATCACATGTAAAGAGAGGGCCTGGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR TCA 72 bp GAAGAAAATGTGATGTCAGTTCCCATAAACCATGACTaGCAGGCTCTGCATAAGTTTGTAAATACTGTATTT +
Preference number: 3 (lower is better)
Translates to: EENVMSVPINHD*QALHKFVNTVF
Trigger: AAATACAGTATTTACAAACTTATGCAGAGCCTGTCAGTCATGGTTTATGGGAACTGACATCACATTTTCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GTGACACCACGCGGCCCTAGCCCACCTAGAACTGCCTTCAGCACAGGCTTTTCAGTGTTTGTCTTAGGCTaGGTACAGCTGCCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: VTPRGPSPPRTAFSTGFSVFVLG*VQLPFG
Trigger: GCCAAAAGGCAGCTGTACTCAGCCTAAGACAAACAC...TGAAAAGCCTGTGCTGAAGGCAGTTCTAGGTGGGCTAGGGCCGCGTGGTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp GTGACACCACGCGGCCCTAGCCCACCTAGAACTGCCTTCAGCACAGGCTTTTCAGGGTGCCAAATCTTTTaGCCGTCTAAGACAACCCAG +
Preference number: 4 (lower is better)
Translates to: VTPRGPSPPRTAFSTGFSGCQIF*PSKTTQ
Trigger: CTGGGTTGTCTTAGACGGCCAAAAGATTTGGCACCC...TGAAAAGCCTGTGCTGAAGGCAGTTCTAGGTGGGCTAGGGCCGCGTGGTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GTGACACCACGCGGCCCTAGCCCACCTAGAACTGCCTTCAGCACAGGCTTTTCAGTTGCTGAAAACCACTaGGTAGATGGGTCCAAGCTA +
Preference number: 4 (lower is better)
Translates to: VTPRGPSPPRTAFSTGFSVAENH*VDGSKL
Trigger: TAGCTTGGACCCATCTACTCAGTGGTTTTCAGCAAC...TGAAAAGCCTGTGCTGAAGGCAGTTCTAGGTGGGCTAGGGCCGCGTGGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGCTCCCAAAGCACCTCCAACCTTCACCATTCATCTGCTACACACCCTTGCTCACCAGTGAAACAGGGTaGCTGACCCCACCGTACTTG +
Preference number: 4 (lower is better)
Translates to: ELPKHLQPSPFICYTPLLTSETG*LTPPYL
Trigger: CAAGTACGGTGGGGTCAGTCACCCTGTTTCACTGGT...GAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTGCTTTGGGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCGTGGCTGCCATCGCTaGCGTCGGCTGCGGACAGAC +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSRGCHR*RRLRTD
Trigger: GTCTGTCCGCAGCCGACGGCAGCGATGGCAGCCACG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCCCAGCTGTCGTGGCTaGCATCGCTGCCGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSPSCRG*HRCRRL
Trigger: CAGCCGACGGCAGCGATGGCAGCCACGACAGCTGGG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATCGTGGCTGCCATCGCTaGCGTCGGCTGCGGACAGAC +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNRGCHR*RRLRTD
Trigger: GTCTGTCCGCAGCCGACGGCAGCGATGGCAGCCACG...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGAAGGCAGGCTTCATGCTaGCGGCTGGCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRRQASC*RLAWRL
Trigger: CAGCCTCCAAGCCAGCCGGCAGCATGAAGCCTGCCT...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGCTTCATGCTGCCGGCTaGCTTGGAGGCTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: KISLLTARRTVKKTSAGRLHAAG*LGGCFP
Trigger: GGGGAAGCAGCCTCCAAGCCAGCCGGCAGCATGAAG...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp GTGACACCACGCGGCCCTAGCCCACCTAGAACTGCCTTCAGCACAGGCTTTTCAATTGGTATATTTCCATaGAGCTGGTGCTCCGTCTCA +
Preference number: 4 (lower is better)
Translates to: VTPRGPSPPRTAFSTGFSIGIFP*SWCSVS
Trigger: TGAGACGGAGCACCAGCTCCATGGAAATATACCAAT...TGAAAAGCCTGTGCTGAAGGCAGTTCTAGGTGGGCTAGGGCCGCGTGGTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GTGACACCACGCGGCCCTAGCCCACCTAGAACTGCCTTCAGCACAGGCTTTTCATCTACGAAAGTAATGTaGAAAGTCAGAACGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VTPRGPSPPRTAFSTGFSSTKVM*KVRTGL
Trigger: GAGACCCGTTCTGACTTTTCACATTACTTTCGTAGA...TGAAAAGCCTGTGCTGAAGGCAGTTCTAGGTGGGCTAGGGCCGCGTGGTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGTGTTCCTTTAGCAAAGACCCTATCTGGCCAAACAGAGAAGCCAGAGATCCACTGAGAAGGGGGTTCTaGATAGGGCAGGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: ECSFSKDPIWPNREARDPLRRGF*IGQEDG
Trigger: CCCATCCTCCTGCCCTATTCAGAACCCCCTTCTCAG...TGGATCTCTGGCTTCTCTGTTTGGCCAGATAGGGTCTTTGCTAAAGGAACACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp AAGAGATTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCACCTGGGGACTATGTaGCACCACGCGGCCCTAGCC +
Preference number: 4 (lower is better)
Translates to: KRFRRKPELLLLTGVKIVHLGTM*HHAALA
Trigger: GGCTAGGGCCGCGTGGTGTCACATAGTCCCCAGGTG...CACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp TTCCCCATTTCGCTCTTACAGAATGAACAATGTCTCCAACATCATAGAGTGCTTCGTGGCTGCCATCGCTaGCGTCGGCTGCGGACAGAC +
Preference number: 4 (lower is better)
Translates to: FPISLLQNEQCLQHHRVLRGCHR*RRLRTD
Trigger: GTCTGTCCGCAGCCGACGGCAGCGATGGCAGCCACG...AAGCACTCTATGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAAATGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGACAGGCAGGCTTCATaGTGCCGGCTGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSDRQAS*CRLAWR
Trigger: CCTCCAAGCCAGCCGGCAGCATGAAGCCTGCCTGTC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGCTCCCAAAGCACCTCCAACCTTCACCATTCATCTGCTACACACCCTTGCTCATCACCAAGCCTGGATaGCCTCGTCAAAAACCCAAC +
Preference number: 4 (lower is better)
Translates to: ELPKHLQPSPFICYTPLLITKPG*PRQKPN
Trigger: GTTGGGTTTTTGACGAGGGCATCCAGGCTTGGTGAT...GAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTGCTTTGGGAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGCTCCCAAAGCACCTCCAACCTTCACCATTCATCTGCTACACACCCTTGCTCTTGGTAACGTCGGTGTaGGAAACAGCTCGAATGGTC +
Preference number: 4 (lower is better)
Translates to: ELPKHLQPSPFICYTPLLLVTSV*ETARMV
Trigger: GACCATTCGAGCTGTTTCCCACACCGACGTTACCAA...GAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTGCTTTGGGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCTTCATGCTGCCGGCTaGCTTGGAGGCTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSLHAAG*LGGCFP
Trigger: GGGGAAGCAGCCTCCAAGCCAGCCGGCAGCATGAAG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGTGCTGGCTCCAACACTaGGGGATTCTGCTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: KISLLTARRTVKKTSAGRCWLQH*GILLEH
Trigger: GTGCTCCAGCAGAATCCCTCAGTGTTGGAGCCAGCA...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGCTCCCAAAGCACCTCCAACCTTCACCATTCATCTGCTACACACCCTTGCTCCCTTGTTTTCCTTGTTaGCATTCCCGCTGGTTAGGT +
Preference number: 4 (lower is better)
Translates to: ELPKHLQPSPFICYTPLLPCFPC*HSRWLG
Trigger: ACCTAACCAGCGGGAATGTCAACAAGGAAAACAAGG...GAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTGCTTTGGGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCTGGACCCTAAGGGATaGGGGAGGGGACTCAGACAC +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSLDPKG*GRGLRH
Trigger: GTGTCTGAGTCCCCTCCCTCATCCCTTAGGGTCCAG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCATGGTTTCCACGCCTaGAGGAAGAGCTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSHGFHA*RKSSSP
Trigger: GGGGGAGGAGCTCTTCCTGCAGGCGTGGAAACCATG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312912.10
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGGGAAACAGCTCGAATaGTCCCGGAGAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNGKQLE*SRRARA
Trigger: GGCCCTGGCTCTCCGGGACCATTCGAGCTGTTTCCC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATCTTCATGCTGCCGGCTaGCTTGGAGGCTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNLHAAG*LGGCFP
Trigger: GGGGAAGCAGCCTCCAAGCCAGCCGGCAGCATGAAG...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGAACTTTCTCCGAGCGTaGGCACCATGGTTTCCACGC +
Preference number: 4 (lower is better)
Translates to: KISLLTARRTVKKTSAGRNFLRA*APWFPR
Trigger: GCGTGGAAACCATGGTGCTCACGCTCGGAGAAAGTT...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp AAGAGATTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCTGGACCCTAAGGGATaGGGGAGGGGACTCAGACAC +
Preference number: 4 (lower is better)
Translates to: KRFRRKPELLLLTGVKIVLDPKG*GRGLRH
Trigger: GTGTCTGAGTCCCCTCCCTCATCCCTTAGGGTCCAG...CACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTCTCACAGGAAAGGGTaGGGGCGGTGCAGGGTTAGC +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNSHRKG*GRCRVS
Trigger: GCTAACCCTGCACCGCCCTCACCCTTTCCTGTGAGA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409556.5
CDS-3UTR TCA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCGGAAGGAGTGTCCAGTaGCACCAGTCACCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGGRSVQ*HQSPVK
Trigger: TTTCACTGGTGACTGGTGTCACTGGACACTCCTTCC...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCATTCGGCTTAGTTCTCTaGGCTCCCAAAGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPFGLVL*APKAPP
Trigger: TGGAGGTGCTTTGGGAGCTCAGAGAACTAAGCCGAA...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp TTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCTGTTACATGGTTTCCACGCCTaGAGGAAGAGCTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: FRRKPELLLLTGVKIVLLHGFHA*RKSSSP
Trigger: GGGGGAGGAGCTCTTCCTGCAGGCGTGGAAACCATG...TAACAGCACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCCCAGCTGTCGTGGCTaGCATCGCTGCCGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVPSCRG*HRCRRL
Trigger: CAGCCGACGGCAGCGATGGCAGCCACGACAGCTGGG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCAGGGTATCCCCACAGCTaGAGTAATCCCGCACTAGTA +
Preference number: 4 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPGYPHS*SNPALV
Trigger: TACTAGTGCGGGATTACTGCAGCTGTGGGGATACCC...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp GGCTTTGAAAAGAGTTTGAATTGCCTGTTTGAACAAGGGCAGTTTGCCTTTATTACGTCCCAGCTGTCGTaGCTGCCATCGCTGCCGTCG +
Preference number: 4 (lower is better)
Translates to: GFEKSLNCLFEQGQFAFITSQLS*LPSLPS
Trigger: CGACGGCAGCGATGGCAGCCACGACAGCTGGGACGT...AATAAAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTCAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGTGTTCCTTTAGCAAAGACCCTATCTGGCCAAACAGAGAAGCCAGAGATCCACCTCCATTGCTCTTCTaGACCCTAAGGGATGAGGGA +
Preference number: 4 (lower is better)
Translates to: ECSFSKDPIWPNREARDPPPLLF*TLRDEG
Trigger: TCCCTCATCCCTTAGGGTCCAGAAGAGCAATGGAGG...TGGATCTCTGGCTTCTCTGTTTGGCCAGATAGGGTCTTTGCTAAAGGAACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGCTGTCGACCGAAGATaGGCCTTCCACTTGGCGGAA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNAVDRR*AFHLAE
Trigger: TTCCGCCAAGTGGAAGGCTCATCTTCGGTCGACAGC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409556.5
CDS-3UTR TCA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCCCCATGGCCACATCCTaGCCTGATTATATTCACCTG +
Preference number: 4 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGPMATS*PDYIHL
Trigger: CAGGTGAATATAATCAGGTCAGGATGTGGCCATGGG...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGCAGGAATATGGCCTGTaGCACCCCTCACTACTACTG +
Preference number: 4 (lower is better)
Translates to: KISLLTARRTVKKTSAGRQEYGL*HPSLLL
Trigger: CAGTAGTAGTGAGGGGTGTCACAGGCCATATTCCTG...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTCAGCCAAAGACACCTaGGTTGCAACCGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNSAKDT*VATGSL
Trigger: GAGGCTGCCGGTTGCAACTCAGGTGTCTTTGGCTGA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATATCGCTGCCGTCGGCTaGGGACAGACTGAGAAACCT +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNIAAVG*GQTEKP
Trigger: AGGTTTCTCAGTCTGTCCGCAGCCGACGGCAGCGAT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTACGTGGCTGCCATCGCTaGCGTCGGCTGCGGACAGAC +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLRGCHR*RRLRTD
Trigger: GTCTGTCCGCAGCCGACGGCAGCGATGGCAGCCACG...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCACCCAGCTGTCGTGGCTaGCATCGCTGCCGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPPSCRG*HRCRRL
Trigger: CAGCCGACGGCAGCGATGGCAGCCACGACAGCTGGG...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGGTTGCTCCTTATCCTTaGGGAGACTGTCCAAGCGAC +
Preference number: 4 (lower is better)
Translates to: KISLLTARRTVKKTSAGRVAPYP*GDCPSD
Trigger: GTCGCTTGGACAGTCTCCGCAAGGATAAGGAGCAAC...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCAAACACTGAGGGATTCTaGTGGAGCACTGCACCAAGA +
Preference number: 4 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPNTEGF*WSTAPR
Trigger: TCTTGGTGCAGTGCTCCAGCAGAATCCCTCAGTGTT...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGGGACTGTGCTGGATTTaGTTAAAGGTGGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: KISLLTARRTVKKTSAGRGLCWI*LKVGGV
Trigger: CACCCCTCCCACCTTTAAGCAAATCCAGCACAGTCC...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCATTTCCATGGAGCTGGTaGTCCGTCTCAGATGGTGAT +
Preference number: 4 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPFPWSW*SVSDGD
Trigger: ATCACCATCTGAGACGGAGCACCAGCTCCATGGAAA...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGCACAGGACACATACTaGGAGAGGCCTCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSAQDTY*ERPQSK
Trigger: CTTGCTCTGAGGCCTCTCCCAGTATGTGTCCTGTGC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGCTTCCGCCGCTCATTaGCTGAAACACAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNASAAH*LKHRSW
Trigger: CCAGCTCCTGTGTTTCAGCCAATGAGCGGCGGAAGC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409556.5
CDS-3UTR CCA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCTTCAAACCCCTGTTGTaGTCCAGGCCCTCTCTTTAC +
Preference number: 4 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGFKPLL*SRPSLY
Trigger: GTAAAGAGAGGGCCTGGACCACAACAGGGGTTTGAA...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGATTTGAAGCAGGCACCTaGGGACTATGTGACACCACG +
Preference number: 4 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRFEAGT*GLCDTT
Trigger: CGTGGTGTCACATAGTCCCCAGGTGCCTGCTTCAAA...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATACACCCAGTGCAGGTTaGAGATGGTGGTGTCGCACA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNTPSAG*RWWCRT
Trigger: TGTGCGACACCACCATCTTCAACCTGCACTGGGTGT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGATGCCTGTCTCCCCTATaGACTCATCCCAGAATTCAG +
Preference number: 4 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRCLSPL*THPRIQ
Trigger: CTGAATTCTGGGATGAGTTCATAGGGGAGACAGGCA...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp AAGAGATTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGAACAACACTGCCCTTTaGAGCAGGCACCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: KRFRRKPELLLLTGVKIVNNTAL*SRHLGT
Trigger: AGTCCCCAGGTGCCTGCTTCAAAGGGCAGTGTTGTT...CACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGTGTTCCTTTAGCAAAGACCCTATCTGGCCAAACAGAGAAGCCAGAGATCCAAGGAAAACTTTAGTCTaGACTCTGCCAGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: ECSFSKDPIWPNREARDPRKTLV*TLPALS
Trigger: GGACAGAGCTGGCAGAGTTCAGACTAAAGTTTTCCT...TGGATCTCTGGCTTCTCTGTTTGGCCAGATAGGGTCTTTGCTAAAGGAACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGAGCCTGGGGAGTACTTTaGTGTCTTGGGTCCTTACTA +
Preference number: 4 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRAWGVL*CLGSLL
Trigger: TAGTAAGGACCCAAGACAGCAAAGTACTCCCCAGGC...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATCGAGGACACACCCAGTaGAGGTTGAAGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNRGHTQ*RLKMVV
Trigger: CACCACCATCTTCAACCTGCACTGGGTGTGTCCTCG...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp AAGAGATTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCGAGGACACACCCAGTaGAGGTTGAAGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KRFRRKPELLLLTGVKIVRGHTQ*RLKMVV
Trigger: CACCACCATCTTCAACCTGCACTGGGTGTGTCCTCG...CACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAGGCAGGCTTCATGCTaGCGGCTGGCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVRQASC*RLAWRL
Trigger: CAGCCTCCAAGCCAGCCGGCAGCATGAAGCCTGCCT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGGACTGTGCTGGATTTaGTTAAAGGTGGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSGLCWI*LKVGGV
Trigger: CACCCCTCCCACCTTTAAGCAAATCCAGCACAGTCC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCCTTCTCCGTGTCCTTTaGAGCATATATGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGLLRVL*SIYVPQ
Trigger: CTGTGGCACATATATGCTGCAAAGGACACGGAGAAG...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCTGATGTGGAGCTCCTaGCGGGATAAACACCACATC +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSLMWSS*RDKHHI
Trigger: GATGTGGTGTTTATCCCGGCAGGAGCTCCACATCAG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGCTCCCAAAGCACCTCCAACCTTCACCATTCATCTGCTACACACCCTTGCTCGCTGATACGAGGTTTTaGTTTTACAGCCTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: ELPKHLQPSPFICYTPLLADTRF*FYSLVK
Trigger: TTTTACCAGGCTGTAAAAGCAAAACCTCGTATCAGC...GAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTGCTTTGGGAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp TTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCTGTTACAAAGACACCTGAGTTaGAACCGGCAGCCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: FRRKPELLLLTGVKIVLLQRHLS*NRQPQC
Trigger: GCACTGAGGCTGCCGGTTGCAACTCAGGTGTCTTTG...TAACAGCACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAACGTCCCAGCTGTCGTaGCTGCCATCGCTGCCGTCG +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPTSQLS*LPSLPS
Trigger: CGACGGCAGCGATGGCAGCCACGACAGCTGGGACGT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGCACAGGACACATACTaGGAGAGGCCTCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNAQDTY*ERPQSK
Trigger: CTTGCTCTGAGGCCTCTCCCAGTATGTGTCCTGTGC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTGGGTCCTTACTAGGTaGAGTTGCCGCAGTACAGCC +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNWVLTR*SCRSTA
Trigger: GGCTGTACTGCGGCAACTCCACCTAGTAAGGACCCA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTTGCTCCAAGGTTAGGTaGAGAGTTGGCAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: DKQERKPADKLYSAHHFVCSKVR*RVGSLG
Trigger: CCCCAGGCTGCCAACTCTCCACCTAACCTTGGAGCA...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCACTGAGGGATTCTGCTaGAGCACTGCACCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSTEGFC*STAPRV
Trigger: GACTCTTGGTGCAGTGCTCCAGCAGAATCCCTCAGT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTTCATGCTGCCGGCTaGCTTGGAGGCTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVLHAAG*LGGCFP
Trigger: GGGGAAGCAGCCTCCAAGCCAGCCGGCAGCATGAAG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATAATAGGGCAGGAGGATaGGAGGCCTACATTACCTGC +
Preference number: 4 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHNRAGG*EAYITC
Trigger: GCAGGTAATGTAGGCCTCCCATCCTCCTGCCCTATT...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCACTTCTGGTGCATTTaGAACATCCGATGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSHFWCI*NIRWGR
Trigger: CCTTCCCCATCGGATGTTTCAAATGCACCAGAAGTG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTACACCCAGTGCAGGTTaGAGATGGTGGTGTCGCACA +
Preference number: 4 (lower is better)
Translates to: DKQERKPADKLYSAHHFVTPSAG*RWWCRT
Trigger: TGTGCGACACCACCATCTTCAACCTGCACTGGGTGT...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCAGTAGCACATTTTGTCTaGTCTCCCAAATCCCATCAG +
Preference number: 4 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPVAHFV*SPKSHQ
Trigger: CTGATGGGATTTGGGAGATCAGACAAAATGTGCTAC...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GGCTTTGAAAAGAGTTTGAATTGCCTGTTTGAACAAGGGCAGTTTGCCTTTATTGACACCAGTCACCAGTaGAACAGGGTGACTGACCCC +
Preference number: 4 (lower is better)
Translates to: GFEKSLNCLFEQGQFAFIDTSHQ*NRVTDP
Trigger: GGGGTCAGTCACCCTGTTTCACTGGTGACTGGTGTC...AATAAAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTCAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGAAGGAAGGCCAGTCAATaGTTGTGGAACAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRRKASQ*LWNRLQ
Trigger: TTGGAGTCTGTTCCACAAGCATTGACTGGCCTTCCT...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGATGTTCTAGGTGCTTCTaGAGTTCAGGAGGATTGGCA +
Preference number: 4 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRCSRCF*SSGGLA
Trigger: TGCCAATCCTCCTGAACTGCAGAAGCACCTAGAACA...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGTGTTCCTTTAGCAAAGACCCTATCTGGCCAAACAGAGAAGCCAGAGATCCAGGCCAAGATGTACTTTaGTGTGTCCAAATCAATCCC +
Preference number: 4 (lower is better)
Translates to: ECSFSKDPIWPNREARDPGQDVL*CVQINP
Trigger: GGGATTGATTTGGACACAGCAAAGTACATCTTGGCC...TGGATCTCTGGCTTCTCTGTTTGGCCAGATAGGGTCTTTGCTAAAGGAACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCAACACTGAGGGATTCTaGTGGAGCACTGCACCAAGA +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSNTEGF*WSTAPR
Trigger: TCTTGGTGCAGTGCTCCAGCAGAATCCCTCAGTGTT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAGGCAGGCTTCATGCTaGCGGCTGGCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPRQASC*RLAWRL
Trigger: CAGCCTCCAAGCCAGCCGGCAGCATGAAGCCTGCCT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAGGCAGGCTTCATGCTaGCGGCTGGCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLRQASC*RLAWRL
Trigger: CAGCCTCCAAGCCAGCCGGCAGCATGAAGCCTGCCT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGACAGGCAGGCTTCATaGTGCCGGCTGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLDRQAS*CRLAWR
Trigger: CCTCCAAGCCAGCCGGCAGCATGAAGCCTGCCTGTC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGACAGGCAGGCTTCATaGTGCCGGCTGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPDRQAS*CRLAWR
Trigger: CCTCCAAGCCAGCCGGCAGCATGAAGCCTGCCTGTC...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGTGTTCCTTTAGCAAAGACCCTATCTGGCCAAACAGAGAAGCCAGAGATCCAACGTATGGAGGACTGTaGTGGATTTGCTTAAAGGTG +
Preference number: 4 (lower is better)
Translates to: ECSFSKDPIWPNREARDPTYGGL*WICLKV
Trigger: CACCTTTAAGCAAATCCAGCACAGTCCTCCATACGT...TGGATCTCTGGCTTCTCTGTTTGGCCAGATAGGGTCTTTGCTAAAGGAACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGAGTCCACAGGAATCCTaGCTGAAGAGTTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: KISLLTARRTVKKTSAGRSPQES*LKSLNS
Trigger: GCTGTTCAAACTCTTCAGGCAGGATTCCTGTGGACT...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGAGACTCTGTCTCCACATaGTTCAAGAAACCCGCCAAA +
Preference number: 4 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRDSVST*FKKPAK
Trigger: TTTGGCGGGTTTCTTGAAGCATGTGGAGACAGAGTC...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp AAGAGATTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGGAGGCCTACATTACCTaGCCTTGTTTCCAGCACTCC +
Preference number: 4 (lower is better)
Translates to: KRFRRKPELLLLTGVKIVEAYIT*PCFQHS
Trigger: GGAGTGCTGGAAACAAGGGCAGGTAATGTAGGCCTC...CACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGGGAAACAGCTCGAATaGTCCCGGAGAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLGKQLE*SRRARA
Trigger: GGCCCTGGCTCTCCGGGACCATTCGAGCTGTTTCCC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGGGAAACAGCTCGAATaGTCCCGGAGAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPGKQLE*SRRARA
Trigger: GGCCCTGGCTCTCCGGGACCATTCGAGCTGTTTCCC...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATACTGAGGGATTCTGCTaGAGCACTGCACCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNTEGFC*STAPRV
Trigger: GACTCTTGGTGCAGTGCTCCAGCAGAATCCCTCAGT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTCCAGACACCATCACTaGCTGCCCTTGTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNSRHHH*LPLFPA
Trigger: TGCTGGAAACAAGGGCAGCCAGTGATGGTGTCTGGA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
CDS-3UTR CCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTGTGTACTCGGGCAGTaGAATGTTGGCCATCAGATC +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSCVLGQ*NVGHQI
Trigger: GATCTGATGGCCAACATTCCACTGCCCGAGTACACA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATCGGCATACTGATTACTaGAACGAGGGGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNRHTDY*NEGEKG
Trigger: TCCCTTCTCCCCCTCGTTCCAGTAATCAGTATGCCG...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATGAAGAAGACAAGCGCTaGAAGGAGTGTCCAGTGACA +
Preference number: 4 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHEEDKR*KECPVT
Trigger: TGTCACTGGACACTCCTTCCAGCGCTTGTCTTCTTC...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGCTTAAGTGCCCCCATTaGCAGAAGACGACTAGTAGT +
Preference number: 4 (lower is better)
Translates to: KISLLTARRTVKKTSAGRLKCPH*QKTTSS
Trigger: ACTACTAGTCGTCTTCTGCCAATGGGGGCACTTAAG...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CAA 72 bp CACCTCCAACCTTCACCATTCATCTGCTACACACCCTaGCTCTCAAACTACATGGGTAAGCATCTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: HLQPSPFICYTP*LSNYMGKHLGE
Trigger: TTCTCCTAGATGCTTACCCATGTAGTTTGAGAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGTTGCTGAAAACCACTaGGTAGATGGGTCCAAGCTA +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSVAENH*VDGSKL
Trigger: TAGCTTGGACCCATCTACTCAGTGGTTTTCAGCAAC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATTCTCCAGTTCCAATCTaGGAGGACTTTGAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHSPVPI*EDFESN
Trigger: GTTGCTCTCAAAGTCCTCTCAGATTGGAACTGGAGA...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGTGTTCCTTTAGCAAAGACCCTATCTGGCCAAACAGAGAAGCCAGAGATCCATCCAATCTGTTTTCCTaGTCAGTGTTTGTCTTAGGC +
Preference number: 4 (lower is better)
Translates to: ECSFSKDPIWPNREARDPSNLFS*SVFVLG
Trigger: GCCTAAGACAAACACTGATCAGGAAAACAGATTGGA...TGGATCTCTGGCTTCTCTGTTTGGCCAGATAGGGTCTTTGCTAAAGGAACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp AAGAGATTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCACTTCTGGTGCATTTaGAACATCCGATGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KRFRRKPELLLLTGVKIVHFWCI*NIRWGR
Trigger: CCTTCCCCATCGGATGTTTCAAATGCACCAGAAGTG...CACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTGCTGGCTCCAACACTaGGGGATTCTGCTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVCWLQH*GILLEH
Trigger: GTGCTCCAGCAGAATCCCTCAGTGTTGGAGCCAGCA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGAGATATCGGAATTCCTaGGTAAGCCAGAAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: KISLLTARRTVKKTSAGRRYRNS*VSQKQC
Trigger: ACACTGCTTCTGGCTTACTCAGGAATTCCGATATCT...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTCAGCAAGACGGACTGTaGAGAAGACAAGCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: DKQERKPADKLYSAHHFVQQDGL*RRQALE
Trigger: TTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTG...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGATCTCAGATGGTGATGTaGCAGTTTCGGCTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRSQMVM*QFRLSS
Trigger: AGAACTAAGCCGAAACTGTCACATCACCATCTGAGA...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGTGTTCCTTTAGCAAAGACCCTATCTGGCCAAACAGAGAAGCCAGAGATCCAAAAAGAACAATATGGTaGCCAAGCCGGTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ECSFSKDPIWPNREARDPKRTIW*PSRFSG
Trigger: TCCAGAAAACCGGCTTGGTCACCATATTGTTCTTTT...TGGATCTCTGGCTTCTCTGTTTGGCCAGATAGGGTCTTTGCTAAAGGAACACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCACATGGTTTCCACGCCTaGAGGAAGAGCTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPHGFHA*RKSSSP
Trigger: GGGGGAGGAGCTCTTCCTGCAGGCGTGGAAACCATG...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312912.10
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCATCGCTGCCGTCGGCTaGGGACAGACTGAGAAACCT +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVIAAVG*GQTEKP
Trigger: AGGTTTCTCAGTCTGTCCGCAGCCGACGGCAGCGAT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGTTGTAGGTACAGACTaGACAGGACACATACTGGGA +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSVVGTD*TGHILG
Trigger: TCCCAGTATGTGTCCTGTGCAGTCTGTACCTACAAC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGCCTGGGGAGTACTTTaGTGTCTTGGGTCCTTACTA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNAWGVL*CLGSLL
Trigger: TAGTAAGGACCCAAGACAGCAAAGTACTCCCCAGGC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCAGGAAGGCCAGTCAATaGTTGTGGAACAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSRKASQ*LWNRLQ
Trigger: TTGGAGTCTGTTCCACAAGCATTGACTGGCCTTCCT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTGTTCTAGGTGCTTCTaGAGTTCAGGAGGATTGGCA +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSCSRCF*SSGGLA
Trigger: TGCCAATCCTCCTGAACTGCAGAAGCACCTAGAACA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATAACACTGAGGGATTCTaGTGGAGCACTGCACCAAGA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNNTEGF*WSTAPR
Trigger: TCTTGGTGCAGTGCTCCAGCAGAATCCCTCAGTGTT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGAACTAGGTCTACTTCCTaGTCACCAAACTCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRTRSTS*SPNSFL
Trigger: CAGGAAAGAGTTTGGTGAGCAGGAAGTAGACCTAGT...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTTTGCAGCATATATGTaGCACAGTGCTCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSFAAYM*HSAPGF
Trigger: GAAGCCAGGAGCACTGTGGCACATATATGCTGCAAA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCTTCTCCGTGTCCTTTaGAGCATATATGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSLLRVL*SIYVPQ
Trigger: CTGTGGCACATATATGCTGCAAAGGACACGGAGAAG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTCTGATGTGGAGCTCCTaGCGGGATAAACACCACATC +
Preference number: 4 (lower is better)
Translates to: DKQERKPADKLYSAHHFVLMWSS*RDKHHI
Trigger: GATGTGGTGTTTATCCCGGCAGGAGCTCCACATCAG...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCAAACCGGCAGCCTCAGTaGCAAACAATTTTAAAACTG +
Preference number: 4 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPNRQPQ*QTILKL
Trigger: CAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTT...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATAGGATCGTGGTCTGCTaGGTTTTCTTGACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNRIVVC*VFLTLL
Trigger: GAGCAAGGTCAAGAAAACCCAGCAGACCACGATCCT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATCTGAAACACAGGAGCTaGGCGAGGTGGATTGTTCTT +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNLKHRS*ARWIVL
Trigger: AAGAACAATCCACCTCGCCCAGCTCCTGTGTTTCAG...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409556.5
3UTR CAA 72 bp ATTGTGCTGTTAAACGTATGGAGGACTGTGCTGGATTaGCTTAAAGGTGGGAGGGGTGGAAGGCATTTGATT +
Preference number: 4 (lower is better)
Translates to: IVLLNVWRTVLD*LKGGRGGRHLI
Trigger: AATCAAATGCCTTCCACCCCTCCCACCTTTAAGCAAATCCAGCACAGTCCTCCATACGTTTAACAGCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CAA 72 bp AGGGGAAACCTAGAATCTTCCAAATCCCTGCAACCCTaGCTAGTAACAAGTAGGACCACTTGCTACATGACA +
Preference number: 4 (lower is better)
Translates to: RGNLESSKSLQP*LVTSRTTCYMT
Trigger: TGTCATGTAGCAAGTGGTCCTACTTGTTACTAGCAAGGGTTGCAGGGATTTGGAAGATTCTAGGTTTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAACTTTCTCCGAGCGTaGGCACCATGGTTTCCACGC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVNFLRA*APWFPR
Trigger: GCGTGGAAACCATGGTGCTCACGCTCGGAGAAAGTT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCATTTATAACGGTTGCTaGAAACCACTGAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGIYNGC*KPLSRW
Trigger: CCATCTACTCAGTGGTTTTCAGCAACCGTTATAAAT...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATAATCTGAGAGGACTTTaGGAGCAACCCTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNNLRGL*EQPCFA
Trigger: TGCAAAGCAGGGTTGCTCTCAAAGTCCTCTCAGATT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTCTCCAGTTCCAATCTaGGAGGACTTTGAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNSPVPI*EDFESN
Trigger: GTTGCTCTCAAAGTCCTCTCAGATTGGAACTGGAGA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp GGCTTTGAAAAGAGTTTGAATTGCCTGTTTGAACAAGGGCAGTTTGCCTTTATTGCGGCAAAACACAGGTaGGTCCTTCTGTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GFEKSLNCLFEQGQFAFIAAKHR*VLLLLL
Trigger: AAGGAGCAACAGAAGGACTCACCTGTGTTTTGCCGC...AATAAAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTCAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCACACCCAGTGCAGGTTaGAGATGGTGGTGTCGCACA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVTPSAG*RWWCRT
Trigger: TGTGCGACACCACCATCTTCAACCTGCACTGGGTGT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGTGCTTTTCCAGGAATaGTCTGTGTGGGCATTAAGT +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSVLFQE*SVWALS
Trigger: ACTTAATGCCCACACAGATCATTCCTGGAAAAGCAC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATGCTGGCTCCAACACTaGGGGATTCTGCTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPCWLQH*GILLEH
Trigger: GTGCTCCAGCAGAATCCCTCAGTGTTGGAGCCAGCA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGACACCAAACTCTTTCCTaGAGGATTCAGGTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRHQTLS*RIQVSK
Trigger: TTTGGAAACCTGAATCCTTCAGGAAAGAGTTTGGTG...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCAAGTTGTCCAAACAGCTaGAGAATAACTGCAGGTATT +
Preference number: 4 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPSCPNS*RITAGI
Trigger: AATACCTGCAGTTATTCTTCAGCTGTTTGGACAACT...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAGCCGACTCCAGCGCTaGCTTGGTTCAAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPSRLQR*LGSRAL
Trigger: GAGAGCTCTTGAACCAAGTCAGCGCTGGAGTCGGCT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409556.5
CDS-3UTR TCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGGAAAGGTAAAGCGGTaGTTTCAGAAGGAAATGGGA +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSGKVKR*FQKEMG
Trigger: TCCCATTTCCTTCTGAAATCACCGCTTTACCTTTCC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTCTCCGTCTCAGATGGTaGTGTGACAGTTTCGGCTTA +
Preference number: 4 (lower is better)
Translates to: DKQERKPADKLYSAHHFVLRLRW*CDSFGL
Trigger: TAAGCCGAAACTGTCACATCACCATCTGAGACGGAG...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp AAGAGATTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGGGACCACTTGCTACATaGCAGTGGACAAAACCAAAC +
Preference number: 4 (lower is better)
Translates to: KRFRRKPELLLLTGVKIVGPLAT*QWTKPN
Trigger: GTTTGGTTTTGTCCACTGTCATGTAGCAAGTGGTCC...CACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCGAACCAACAGAAGAATaGCGAAGAAAATGTGATGTC +
Preference number: 4 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGEPTEE*RRKCDV
Trigger: GACATCACATTTTCTTCGTCATTCTTCTGTTGGTTC...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp TTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCTGTTAGTTGTAGGTACAGACTaGACAGGACACATACTGGGA +
Preference number: 4 (lower is better)
Translates to: FRRKPELLLLTGVKIVLLVVGTD*TGHILG
Trigger: TCCCAGTATGTGTCCTGTGCAGTCTGTACCTACAAC...TAACAGCACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTGTTCTAGGTGCTTCTaGAGTTCAGGAGGATTGGCA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNCSRCF*SSGGLA
Trigger: TGCCAATCCTCCTGAACTGCAGAAGCACCTAGAACA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCATCACTATTGACACCTaGTTTCACTTCTGGTGCATT +
Preference number: 4 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGITIDT*FHFWCI
Trigger: AATGCACCAGAAGTGAAAGCAGGTGTCAATAGTGAT...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTGGTGAGTCCTTCTGTTaGTCCTTATCCTTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: DKQERKPADKLYSAHHFVGESFC*SLSLRR
Trigger: TCTCCGCAAGGATAAGGAGCAACAGAAGGACTCACC...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGGCCAAGATGTACTTTaGTGTGTCCAAATCAATCCC +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSGQDVL*CVQINP
Trigger: GGGATTGATTTGGACACAGCAAAGTACATCTTGGCC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCGAGGACACACCCAGTaGAGGTTGAAGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVRGHTQ*RLKMVV
Trigger: CACCACCATCTTCAACCTGCACTGGGTGTGTCCTCG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCACTAGGTCTACTTCCTaGTCACCAAACTCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSTRSTS*SPNSFL
Trigger: CAGGAAAGAGTTTGGTGAGCAGGAAGTAGACCTAGT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCAGGACTTCTTCTTCTTaGTCACACTGTCCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSRTSSS*SHCPLG
Trigger: TCCCAAAGGACAGTGTGAGCAAGAAGAAGAAGTCCT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTTTGCAGCATATATGTaGCACAGTGCTCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNFAAYM*HSAPGF
Trigger: GAAGCCAGGAGCACTGTGGCACATATATGCTGCAAA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATCTTCTCCGTGTCCTTTaGAGCATATATGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNLLRVL*SIYVPQ
Trigger: CTGTGGCACATATATGCTGCAAAGGACACGGAGAAG...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATAGTCCACAGGAATCCTaGCTGAAGAGTTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNSPQES*LKSLNS
Trigger: GCTGTTCAAACTCTTCAGGCAGGATTCCTGTGGACT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp AAGAGATTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCCTTTCACCAGCCCCTaGTGGTACATATCCCTATTA +
Preference number: 4 (lower is better)
Translates to: KRFRRKPELLLLTGVKIVPFTSP*WYISLL
Trigger: TAATAGGGATATGTACCAGCAGGGGCTGGTGAAAGG...CACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTCTGCTACACACCCTTaGTCTCAAACTACATGGGTA +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSSATHP*SQTTWV
Trigger: TACCCATGTAGTTTGAGAGCAAGGGTGTGTAGCAGA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp AAGAGATTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCCTTCACCATTCATCTaGTACACACCCTTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: KRFRRKPELLLLTGVKIVPSPFI*YTPLLS
Trigger: TGAGAGCAAGGGTGTGTAGCAGATGAATGGTGAAGG...CACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTGGGTCCTTACTAGGTaGAGTTGCCGCAGTACAGCC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVWVLTR*SCRSTA
Trigger: GGCTGTACTGCGGCAACTCCACCTAGTAAGGACCCA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATGCTCCAAGGTTAGGTaGAGAGTTGGCAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPCSKVR*RVGSLG
Trigger: CCCCAGGCTGCCAACTCTCCACCTAACCTTGGAGCA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATGCTCCAAGGTTAGGTaGAGAGTTGGCAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLCSKVR*RVGSLG
Trigger: CCCCAGGCTGCCAACTCTCCACCTAACCTTGGAGCA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGATGCTTTGCAGACATCTaGTTTTGTTCTCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRCFADI*FCSQSF
Trigger: GAAGCTCTGAGAACAAAACCAGATGTCTGCAAAGCA...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATGCCAGTCAATGCTTGTaGAACAGACTCCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHASQCL*NRLQSV
Trigger: AACAGATTGGAGTCTGTTCCACAAGCATTGACTGGC...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCAGTGGTCTCCAATGTTaGCCAAGATGTACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSSGLQC*PRCTLL
Trigger: CAGCAAAGTACATCTTGGCCAACATTGGAGACCACT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATAGTGGTCTCCAATGTTaGCCAAGATGTACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHSGLQC*PRCTLL
Trigger: CAGCAAAGTACATCTTGGCCAACATTGGAGACCACT...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTATGGAGGACTGTGCTaGATTTGCTTAAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSYGGLC*ICLKVG
Trigger: TCCCACCTTTAAGCAAATCCAGCACAGTCCTCCATA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATGTGCTGTTAAACGTATaGAGGACTGTGCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHVLLNV*RTVLDL
Trigger: CAAATCCAGCACAGTCCTCCATACGTTTAACAGCAC...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp TTCCCCATTTCGCTCTTACAGAATGAACAATGTCTCCAACATCATAGAGTGCTTTGTGTACTCGGGCAGTaGAATGTTGGCCATCAGATC +
Preference number: 4 (lower is better)
Translates to: FPISLLQNEQCLQHHRVLCVLGQ*NVGHQI
Trigger: GATCTGATGGCCAACATTCCACTGCCCGAGTACACA...AAGCACTCTATGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAAATGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp GGCTTTGAAAAGAGTTTGAATTGCCTGTTTGAACAAGGGCAGTTTGCCTTTATTTGCCAAGCAGGAATATaGCCTGTGACACCCCTCACT +
Preference number: 4 (lower is better)
Translates to: GFEKSLNCLFEQGQFAFICQAGI*PVTPLT
Trigger: AGTGAGGGGTGTCACAGGCCATATTCCTGCTTGGCA...AATAAAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTCAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAACTTTCTCCGAGCGTaGGCACCATGGTTTCCACGC +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLNFLRA*APWFPR
Trigger: GCGTGGAAACCATGGTGCTCACGCTCGGAGAAAGTT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTCCTCACAGTTGACTTaGAGAGTTTTTGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNSSQLT*RVFDAG
Trigger: CCCAGCATCAAAAACTCTTCAAGTCAACTGTGAGGA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGATGTACAACTTCAACATaGATCAGTGACGGATCAACA +
Preference number: 4 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRCTTST*ISDGST
Trigger: TGTTGATCCGTCACTGATTCATGTTGAAGTTGTACA...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTAATCTGAGAGGACTTTaGGAGCAACCCTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: DKQERKPADKLYSAHHFVNLRGL*EQPCFA
Trigger: TGCAAAGCAGGGTTGCTCTCAAAGTCCTCTCAGATT...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGCGGCAAAACACAGGTaGGTCCTTCTGTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVAAKHR*VLLLLL
Trigger: AAGGAGCAACAGAAGGACTCACCTGTGTTTTGCCGC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTGTAACCTCCTGAAGTaGAAGAAGCGGCAAAACACA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNCNLLK*KKRQNT
Trigger: TGTGTTTTGCCGCTTCTTTCACTTCAGGAGGTTACA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTCAGAAATCACCATTTaGCAGAAGTGGTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSSEITI*QKWSPM
Trigger: CATTGGAGACCACTTCTGTCAAATGGTGATTTCTGA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGTGTGGCTCAATAGTTaGCATAGCTTCCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSVWLNS*HSFLFR
Trigger: TCTGAAAAGGAAGCTATGTCAACTATTGAGCCACAC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGATCTGGTTCATGTATCTaGCTCTTCACACATTTTAGC +
Preference number: 4 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRSGSCI*LFTHFS
Trigger: GCTAAAATGTGTGAAGAGTCAGATACATGAACCAGA...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTCAGAGTTCAATTTATaGTGCACTCCAGACACCATC +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSSEFNL*CTPDTI
Trigger: GATGGTGTCTGGAGTGCATCATAAATTGAACTCTGA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATTCAGAGTTCAATTTATaGTGCACTCCAGACACCATC +
Preference number: 4 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHSEFNL*CTPDTI
Trigger: GATGGTGTCTGGAGTGCATCATAAATTGAACTCTGA...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCACAATGCGGCATACTaGTTACTGGAACGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVHNAAY*LLERGG
Trigger: TCCCCCTCGTTCCAGTAATCAGTATGCCGCATTGTG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp TTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCTGTTACCCATAAACCATGACTaGCAGGCTCTGCATAAGTTT +
Preference number: 4 (lower is better)
Translates to: FRRKPELLLLTGVKIVLLPINHD*QALHKF
Trigger: AAACTTATGCAGAGCCTGTCAGTCATGGTTTATGGG...TAACAGCACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTTACTAGGTGGAGTTaGCGCAGTACAGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVLTRWS*RSTAKQ
Trigger: CTGCTTGGCTGTACTGCGGCAACTCCACCTAGTAAG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGCATTTAGGCAACTGTaGCACGATGTTCACACAAGA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNAFRQL*HDVHTR
Trigger: TCTTGTGTGAACATCGTGGCACAGTTGCCTAAATGC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGTTGCTCCTTATCCTTaGGGAGACTGTCCAAGCGAC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVVAPYP*GDCPSD
Trigger: GTCGCTTGGACAGTCTCCGCAAGGATAAGGAGCAAC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGGCCAAGATGTACTTTaGTGTGTCCAAATCAATCCC +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNGQDVL*CVQINP
Trigger: GGGATTGATTTGGACACAGCAAAGTACATCTTGGCC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATACTAGGTCTACTTCCTaGTCACCAAACTCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNTRSTS*SPNSFL
Trigger: CAGGAAAGAGTTTGGTGAGCAGGAAGTAGACCTAGT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATAGGACTTCTTCTTCTTaGTCACACTGTCCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNRTSSS*SHCPLG
Trigger: TCCCAAAGGACAGTGTGAGCAAGAAGAAGAAGTCCT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATATATATGTGCCACAGTaGTCCTGGCTTCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNIYVPQ*SWLLFS
Trigger: GGAAAAGAGAAGCCAGGAGCACTGTGGCACATATAT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATAATAGGATCGTGGTCTaGTGGGTTTTCTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNNRIVV*WVFLTL
Trigger: CAAGGTCAAGAAAACCCAGCAGACCACGATCCTATT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTGATGTGGAGCTCCTaGCGGGATAAACACCACATC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVLMWSS*RDKHHI
Trigger: GATGTGGTGTTTATCCCGGCAGGAGCTCCACATCAG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCAGCTGAAGAATAACTaGAGGTATTGTTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSQLKNN*RYCSRA
Trigger: AGCTCTGGAACAATACCTGCAGTTATTCTTCAGCTG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCACCATACAATAAGAACTaGAACATTAGCTGTCACTTC +
Preference number: 4 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPPYNKN*NISCHF
Trigger: GAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGG...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGCAGGGAAGAGAACGTaGGGTTTCAGGCGTACTCAG +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPAGKRT*GFRRTQ
Trigger: CTGAGTACGCCTGAAACCGCACGTTCTCTTCCCTGC...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409556.5
CDS-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTACATGGTTTCCACGCCTaGAGGAAGAGCTCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLHGFHA*RKSSSL
Trigger: AAGGGAGGAGCTCTTCCTGCAGGCGTGGAAACCATG...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409064.5
CDS-3UTR GCA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTAAGATCCAACAACACTaGCCTTTGAAGCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: DKQERKPADKLYSAHHFVKIQQH*PLKQAP
Trigger: AGGTGCCTGCTTCAAAGGGCAGTGTTGTTGGATCTT...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCATGAACGTCTGAAGTaGTCAGATTCTCAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSHERLK*SDSQGN
Trigger: ATTGCCTTGAGAATCTGAGCACTTCAGACGTTCATG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGAACAATTTTCAGTGCTaGAATCTCCTCACAGTTGAC +
Preference number: 4 (lower is better)
Translates to: KISLLTARRTVKKTSAGRNNFQC*NLLTVD
Trigger: GTCAACTGTGAGGAGATTCCAGCACTGAAAATTGTT...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGCACAGGACACATACTaGGAGAGGCCTCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLAQDTY*ERPQSK
Trigger: CTTGCTCTGAGGCCTCTCCCAGTATGTGTCCTGTGC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATGGGTCCTTACTAGGTaGAGTTGCCGCAGTACAGCC +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPWVLTR*SCRSTA
Trigger: GGCTGTACTGCGGCAACTCCACCTAGTAAGGACCCA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATGGGTCCTTACTAGGTaGAGTTGCCGCAGTACAGCC +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLWVLTR*SCRSTA
Trigger: GGCTGTACTGCGGCAACTCCACCTAGTAAGGACCCA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATAGTACTTTGCTGTCTTaGGTCCTTACTAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNSTLLS*VLTRWS
Trigger: ACTCCACCTAGTAAGGACCCAAGACAGCAAAGTACT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGGAGAGTTGGCAGCCTaGGGAGTACTTTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVGELAA*GVLCCL
Trigger: AAGACAGCAAAGTACTCCCCAGGCTGCCAACTCTCC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGAAGTACAGCTGCCTTTTaGCTCAGTCAGAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRSTAAF*LSQNFQ
Trigger: TTGAAAATTCTGACTGAGCCAAAAGGCAGCTGTACT...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTCAAAACCGACTTCCTaGATGGGGCATTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNSKPTS*MGHSGF
Trigger: AAATCCAGAATGCCCCATCCAGGAAGTCGGTTTTGA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTCCCCACAACGTTTTTaGTTAAAGGTAACCACAAGC +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSSPQRF*LKVTTS
Trigger: GCTTGTGGTTACCTTTAACCAAAAACGTTGTGGGGA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATTCCCCACAACGTTTTTaGTTAAAGGTAACCACAAGC +
Preference number: 4 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHSPQRF*LKVTTS
Trigger: GCTTGTGGTTACCTTTAACCAAAAACGTTGTGGGGA...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCACTGAGGGATTCTGCTaGAGCACTGCACCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVTEGFC*STAPRV
Trigger: GACTCTTGGTGCAGTGCTCCAGCAGAATCCCTCAGT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTATGGAGGACTGTGCTaGATTTGCTTAAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNYGGLC*ICLKVG
Trigger: TCCCACCTTTAAGCAAATCCAGCACAGTCCTCCATA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGTGCTGTTAAACGTATaGAGGACTGTGCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNVLLNV*RTVLDL
Trigger: CAAATCCAGCACAGTCCTCCATACGTTTAACAGCAC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATAGTTGCTCTTATTGTTaGGGTCTTGCAAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNSCSYC*GLASTA
Trigger: TGCTGTGCTTGCAAGACCCCAACAATAAGAGCAACT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTGTTATGAACCTGATGTaGAGCTCCTGCCGGGATAAA +
Preference number: 4 (lower is better)
Translates to: DKQERKPADKLYSAHHFVVMNLM*SSCRDK
Trigger: TTTATCCCGGCAGGAGCTCCACATCAGGTTCATAAC...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCCTCCATTGCTCTTCTaGACCCTAAGGGATGAGGGA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVPPLLF*TLRDEG
Trigger: TCCCTCATCCCTTAGGGTCCAGAAGAGCAATGGAGG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAGGAGCTGGGCGAGGTaGATTGTTCTTCAACCGCGT +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPRSWAR*IVLQPR
Trigger: ACGCGGTTGAAGAACAATCCACCTCGCCCAGCTCCT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409556.5
CDS-3UTR CCA 90 bp GAGTGTTCCTTTAGCAAAGACCCTATCTGGCCAAACAGAGAAGCCAGAGATCCACTCTATGTACCATGCTaGTTTAAAATGACCAGTTTG +
Preference number: 4 (lower is better)
Translates to: ECSFSKDPIWPNREARDPLYVPC*FKMTSL
Trigger: CAAACTGGTCATTTTAAACCAGCATGGTACATAGAG...TGGATCTCTGGCTTCTCTGTTTGGCCAGATAGGGTCTTTGCTAAAGGAACACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCAGAAATACTCTTTGTTaGTCTCCCAGAAAGCGAACA +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSRNTLC*SPRKRT
Trigger: TGTTCGCTTTCTGGGAGATCAACAAAGAGTATTTCT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTTCCTCACAGTTGACTTaGAGAGTTTTTGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: DKQERKPADKLYSAHHFVSSQLT*RVFDAG
Trigger: CCCAGCATCAAAAACTCTTCAAGTCAACTGTGAGGA...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGAATCTCCTCACAGTTaGCTTGAAGAGTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSESPHS*LEEFLM
Trigger: CATCAAAAACTCTTCAAGTCAACTGTGAGGAGATTC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTGTACAACTTCAACATaGATCAGTGACGGATCAACA +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSCTTST*ISDGST
Trigger: TGTTGATCCGTCACTGATTCATGTTGAAGTTGTACA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGTGTTTGTCTTAGGCTaGGTACAGCTGCCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVVFVLG*VQLPFG
Trigger: GCCAAAAGGCAGCTGTACTCAGCCTAAGACAAACAC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTCCAATCTGTTTTCCTaGTCAGTGTTTGTCTTAGGC +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNSNLFS*SVFVLG
Trigger: GCCTAAGACAAACACTGATCAGGAAAACAGATTGGA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCACTTCTGGTGCATTTaGAACATCCGATGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVHFWCI*NIRWGR
Trigger: CCTTCCCCATCGGATGTTTCAAATGCACCAGAAGTG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGCGGCAAAACACAGGTaGGTCCTTCTGTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLAAKHR*VLLLLL
Trigger: AAGGAGCAACAGAAGGACTCACCTGTGTTTTGCCGC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGTGTGGCTCAATAGTTaGCATAGCTTCCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNVWLNS*HSFLFR
Trigger: TCTGAAAAGGAAGCTATGTCAACTATTGAGCCACAC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCTGTTAGTGTGGCTCAATAGTTaGCATAGCTTCCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: FRRKPELLLLTGVKIVLLVWLNS*HSFLFR
Trigger: TCTGAAAAGGAAGCTATGTCAACTATTGAGCCACAC...TAACAGCACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTCTGGTTCATGTATCTaGCTCTTCACACATTTTAGC +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSSGSCI*LFTHFS
Trigger: GCTAAAATGTGTGAAGAGTCAGATACATGAACCAGA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTCCCCATTTCGCTCTTACAGAATGAACAATGTCTCCAACATCATAGAGTGCTTGTGCTTTTCCAGGAATaGTCTGTGTGGGCATTAAGT +
Preference number: 4 (lower is better)
Translates to: FPISLLQNEQCLQHHRVLVLFQE*SVWALS
Trigger: ACTTAATGCCCACACAGATCATTCCTGGAAAAGCAC...AAGCACTCTATGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAAATGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTTTGAATTGCCTGTTTaGACAAGGGCAGTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNFELPV*TRAVCL
Trigger: AAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTCAGAGTTCAATTTATaGTGCACTCCAGACACCATC +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNSEFNL*CTPDTI
Trigger: GATGGTGTCTGGAGTGCATCATAAATTGAACTCTGA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATCACCAAACTCTTTCCTaGAGGATTCAGGTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNHQTLS*RIQVSK
Trigger: TTTGGAAACCTGAATCCTTCAGGAAAGAGTTTGGTG...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTCCCCATTTCGCTCTTACAGAATGAACAATGTCTCCAACATCATAGAGTGCTTTCCCATCCTGCCTTATaGCACCACAGCTTTATAGAA +
Preference number: 4 (lower is better)
Translates to: FPISLLQNEQCLQHHRVLSHPAL*HHSFIE
Trigger: TTCTATAAAGCTGTGGTGTCATAAGGCAGGATGGGA...AAGCACTCTATGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAAATGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp TTCCCCATTTCGCTCTTACAGAATGAACAATGTCTCCAACATCATAGAGTGCTTCATGCTGGTTTAAAATaGCCAGTTTGTGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: FPISLLQNEQCLQHHRVLHAGLK*PVCACL
Trigger: GAGACAGGCACAAACTGGTCATTTTAAACCAGCATG...AAGCACTCTATGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAAATGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGCGATTTTACATAAGCTaGAGAATGACAGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KISLLTARRTVKKTSAGRRFYIS*RMTASF
Trigger: AAAGGAAGCTGTCATTCTTCAGCTTATGTAAAATCG...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTACTACTGGCTGTGTaGGGGTGCCAAATCTTTTGG +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVLLLAV*GCQIFW
Trigger: CCAAAAGATTTGGCACCCTCACACAGCCAGTAGTAG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTACAGCTCCAATTCTTaGAGAATTACCACATGTCAC +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSYSSNS*RITTCH
Trigger: GTGACATGTGGTAATTCTGCAAGAATTGGAGCTGTA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTACTTACTAGGTGGAGTTaGCGCAGTACAGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLLTRWS*RSTAKQ
Trigger: CTGCTTGGCTGTACTGCGGCAACTCCACCTAGTAAG...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCACTTACTAGGTGGAGTTaGCGCAGTACAGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPLTRWS*RSTAKQ
Trigger: CTGCTTGGCTGTACTGCGGCAACTCCACCTAGTAAG...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGCCTGGGGAGTACTTTaGTGTCTTGGGTCCTTACTA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVAWGVL*CLGSLL
Trigger: TAGTAAGGACCCAAGACAGCAAAGTACTCCCCAGGC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCATCACTATTGACACCTaGTTTCACTTCTGGTGCATT +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSITIDT*FHFWCI
Trigger: AATGCACCAGAAGTGAAAGCAGGTGTCAATAGTGAT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TTCCCCATTTCGCTCTTACAGAATGAACAATGTCTCCAACATCATAGAGTGCTTGCATTTAGGCAACTGTaGCACGATGTTCACACAAGA +
Preference number: 4 (lower is better)
Translates to: FPISLLQNEQCLQHHRVLAFRQL*HDVHTR
Trigger: TCTTGTGTGAACATCGTGGCACAGTTGCCTAAATGC...AAGCACTCTATGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAAATGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGTTGCTCCTTATCCTTaGGGAGACTGTCCAAGCGAC +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLVAPYP*GDCPSD
Trigger: GTCGCTTGGACAGTCTCCGCAAGGATAAGGAGCAAC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGGTGAGTCCTTCTGTTaGTCCTTATCCTTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVGESFC*SLSLRR
Trigger: TCTCCGCAAGGATAAGGAGCAACAGAAGGACTCACC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGGACTGTGCTGGATTTaGTTAAAGGTGGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPGLCWI*LKVGGV
Trigger: CACCCCTCCCACCTTTAAGCAAATCCAGCACAGTCC...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGAAGTCGTCTTATTTTaGACCAAAGAGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSEVVLF*TKEAKM
Trigger: CATCTTTGCCTCTTTGGTGCAAAATAAGACGACTTC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTAATAGGATCGTGGTCTaGTGGGTTTTCTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: DKQERKPADKLYSAHHFVNRIVV*WVFLTL
Trigger: CAAGGTCAAGAAAACCCAGCAGACCACGATCCTATT...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGCTGATACGAGGTTTTaGTTTTACAGCCTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSADTRF*FYSLVK
Trigger: TTTTACCAGGCTGTAAAAGCAAAACCTCGTATCAGC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGTGTTCCTTTAGCAAAGACCCTATCTGGCCAAACAGAGAAGCCAGAGATCCACATTTCCTTCAACTCTaGATAAACACAGGCAAAATA +
Preference number: 4 (lower is better)
Translates to: ECSFSKDPIWPNREARDPHFLQL*INTGKI
Trigger: TATTTTGCCTGTGTTTATGCAGAGTTGAAGGAAATG...TGGATCTCTGGCTTCTCTGTTTGGCCAGATAGGGTCTTTGCTAAAGGAACACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTTGGTAACGTCGGTGTaGGAAACAGCTCGAATGGTC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVLVTSV*ETARMV
Trigger: GACCATTCGAGCTGTTTCCCACACCGACGTTACCAA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTAGTACTTTGCTGTCTTaGGTCCTTACTAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: DKQERKPADKLYSAHHFVSTLLS*VLTRWS
Trigger: ACTCCACCTAGTAAGGACCCAAGACAGCAAAGTACT...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGGAGAGTTGGCAGCCTaGGGAGTACTTTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPGELAA*GVLCCL
Trigger: AAGACAGCAAAGTACTCCCCAGGCTGCCAACTCTCC...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGGAGAGTTGGCAGCCTaGGGAGTACTTTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLGELAA*GVLCCL
Trigger: AAGACAGCAAAGTACTCCCCAGGCTGCCAACTCTCC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCAGTACAGCTGCCTTTTaGCTCAGTCAGAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSSTAAF*LSQNFQ
Trigger: TTGAAAATTCTGACTGAGCCAAAAGGCAGCTGTACT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAACTGAGGGATTCTGCTaGAGCACTGCACCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLTEGFC*STAPRV
Trigger: GACTCTTGGTGCAGTGCTCCAGCAGAATCCCTCAGT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATCCAGACACCATCACTaGCTGCCCTTGTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPSRHHH*LPLFPA
Trigger: TGCTGGAAACAAGGGCAGCCAGTGATGGTGTCTGGA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTGTGTACTCGGGCAGTaGAATGTTGGCCATCAGATC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVCVLGQ*NVGHQI
Trigger: GATCTGATGGCCAACATTCCACTGCCCGAGTACACA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAGGATCGTGGTCTGCTaGGTTTTCTTGACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVRIVVC*VFLTLL
Trigger: GAGCAAGGTCAAGAAAACCCAGCAGACCACGATCCT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCACCTCCATTGCTCTTCTaGACCCTAAGGGATGAGGGA +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPPPLLF*TLRDEG
Trigger: TCCCTCATCCCTTAGGGTCCAGAAGAGCAATGGAGG...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAGGAATCACCAAGCCTaGATGCCCTCGTCAAAAACC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVRNHQA*MPSSKT
Trigger: GGTTTTTGACGAGGGCATCCAGGCTTGGTGATTCCT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp GGCTTTGAAAAGAGTTTGAATTGCCTGTTTGAACAAGGGCAGTTTGCCTTTATTATATTTCCATGGAGCTaGTGCTCCGTCTCAGATGGT +
Preference number: 4 (lower is better)
Translates to: GFEKSLNCLFEQGQFAFIIFPWS*CSVSDG
Trigger: ACCATCTGAGACGGAGCACCAGCTCCATGGAAATAT...AATAAAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTCAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CAA 72 bp TTACGAAACAGTCCCAAAGACAGCTGCAGATTAGACTaGTTTATCCTTGATCCAGTAACTGGTAAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LRNSPKDSCRLD*FILDPVTGKAE
Trigger: CTCTGCTTTACCAGTTACTGGATCAAGGATAAACAAGTCTAATCTGCAGCTGTCTTTGGGACTGTTTCGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGTTGCTGAAAACCACTaGGTAGATGGGTCCAAGCTA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVVAENH*VDGSKL
Trigger: TAGCTTGGACCCATCTACTCAGTGGTTTTCAGCAAC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATGACTTGAAGAGTTTTTaGTGCTGGGTTTCCATTTAT +
Preference number: 4 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHDLKSF*CWVSIY
Trigger: ATAAATGGAAACCCAGCATCAAAAACTCTTCAAGTC...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGAATCTCCTCACAGTTaGCTTGAAGAGTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNESPHS*LEEFLM
Trigger: CATCAAAAACTCTTCAAGTCAACTGTGAGGAGATTC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTTCAACATGAATCAGTaGCGGATCAACAATTTTCAG +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSFNMNQ*RINNFQ
Trigger: CTGAAAATTGTTGATCCGTCACTGATTCATGTTGAA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAATCTGAGAGGACTTTaGGAGCAACCCTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVNLRGL*EQPCFA
Trigger: TGCAAAGCAGGGTTGCTCTCAAAGTCCTCTCAGATT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGTGTTTGTCTTAGGCTaGGTACAGCTGCCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLVFVLG*VQLPFG
Trigger: GCCAAAAGGCAGCTGTACTCAGCCTAAGACAAACAC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTGTTTGTCTTAGGCTaGGTACAGCTGCCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPVFVLG*VQLPFG
Trigger: GCCAAAAGGCAGCTGTACTCAGCCTAAGACAAACAC...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCACACTTCTGGTGCATTTaGAACATCCGATGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPHFWCI*NIRWGR
Trigger: CCTTCCCCATCGGATGTTTCAAATGCACCAGAAGTG...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTTCGCTCTTACAGAATaGACAATGTCTCCAACATCA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNFALTE*TMSPTS
Trigger: TGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCCTTGTTTTCCTTGTTaGCATTCCCGCTGGTTAGGT +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVPCFPC*HSRWLG
Trigger: ACCTAACCAGCGGGAATGTCAACAAGGAAAACAAGG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTTGATGGTTAGTCCTTaGGGCCTCTTAGATAAATCA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNLMVSP*GLLDKS
Trigger: TGATTTATCTAAGAGGCCTCAAGGACTAACCATCAA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCTGTTATTGATGGTTAGTCCTTaGGGCCTCTTAGATAAATCA +
Preference number: 4 (lower is better)
Translates to: FRRKPELLLLTGVKIVLLLMVSP*GLLDKS
Trigger: TGATTTATCTAAGAGGCCTCAAGGACTAACCATCAA...TAACAGCACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GGCTTTGAAAAGAGTTTGAATTGCCTGTTTGAACAAGGGCAGTTTGCCTTTATTGGATACATGAACGTCTaGAGTGCTCAGATTCTCAAG +
Preference number: 4 (lower is better)
Translates to: GFEKSLNCLFEQGQFAFIGYMNV*SAQILK
Trigger: CTTGAGAATCTGAGCACTTCAGACGTTCATGTATCC...AATAAAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTCAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAGGGCCAAGGATACATaGACGTCTGAAGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPRAKDT*TSEVLR
Trigger: TCTGAGCACTTCAGACGTTCATGTATCCTTGGCCCT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGGTGAGTCCTTCTGTTaGTCCTTATCCTTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLGESFC*SLSLRR
Trigger: TCTCCGCAAGGATAAGGAGCAACAGAAGGACTCACC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GGCTTTGAAAAGAGTTTGAATTGCCTGTTTGAACAAGGGCAGTTTGCCTTTATTAGGACTTCTTCTTCTTaGTCACACTGTCCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: GFEKSLNCLFEQGQFAFIRTSSS*SHCPLG
Trigger: TCCCAAAGGACAGTGTGAGCAAGAAGAAGAAGTCCT...AATAAAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTCAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTTTGCAGCATATATGTaGCACAGTGCTCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVFAAYM*HSAPGF
Trigger: GAAGCCAGGAGCACTGTGGCACATATATGCTGCAAA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTTCTCCGTGTCCTTTaGAGCATATATGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVLLRVL*SIYVPQ
Trigger: CTGTGGCACATATATGCTGCAAAGGACACGGAGAAG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCAATTCATTTCCAATGTaGAGGGAGATTAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSNSFPM*REIKVC
Trigger: GCAAACCTTAATCTCCCTGCACATTGGAAATGAATT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TTCCCCATTTCGCTCTTACAGAATGAACAATGTCTCCAACATCATAGAGTGCTTCAGCTGAAGAATAACTaGAGGTATTGTTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: FPISLLQNEQCLQHHRVLQLKNN*RYCSRA
Trigger: AGCTCTGGAACAATACCTGCAGTTATTCTTCAGCTG...AAGCACTCTATGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAAATGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCCATACAATAAGAACTaGAACATTAGCTGTCACTTC +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSPYNKN*NISCHF
Trigger: GAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATTGGTAACGTCGGTGTaGGAAACAGCTCGAATGGTC +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLLVTSV*ETARMV
Trigger: GACCATTCGAGCTGTTTCCCACACCGACGTTACCAA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATTGGTAACGTCGGTGTaGGAAACAGCTCGAATGGTC +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPLVTSV*ETARMV
Trigger: GACCATTCGAGCTGTTTCCCACACCGACGTTACCAA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGAAAACCACTGAGTAGATaGGTCCAAGCTATAAATTTT +
Preference number: 4 (lower is better)
Translates to: LAVHKCQAFFNLSAPIGRKPLSR*VQAINF
Trigger: AAAATTTATAGCTTGGACCCATCTACTCAGTGGTTT...TCTGCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp GGCTTTGAAAAGAGTTTGAATTGCCTGTTTGAACAAGGGCAGTTTGCCTTTATTTCAAAACCGACTTCCTaGATGGGGCATTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: GFEKSLNCLFEQGQFAFISKPTS*MGHSGF
Trigger: AAATCCAGAATGCCCCATCCAGGAAGTCGGTTTTGA...AATAAAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTCAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATCTTTTTGAGTTTAGCTaGGTCTGTCAAAACCGACTT +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNLFEFS*VCQNRL
Trigger: AAGTCGGTTTTGACAGACCCAGCTAAACTCAAAAAG...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATGTGTACTCGGGCAGTaGAATGTTGGCCATCAGATC +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPCVLGQ*NVGHQI
Trigger: GATCTGATGGCCAACATTCCACTGCCCGAGTACACA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTCAGAATCTCCATCTTaGATGGTCTTAAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNSESPS*MVLRTS
Trigger: AGAAGTCCTTAAGACCATCCAAGATGGAGATTCTGA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAGGATCGTGGTCTGCTaGGTTTTCTTGACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLRIVVC*VFLTLL
Trigger: GAGCAAGGTCAAGAAAACCCAGCAGACCACGATCCT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGTTATGAACCTGATGTaGAGCTCCTGCCGGGATAAA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVVMNLM*SSCRDK
Trigger: TTTATCCCGGCAGGAGCTCCACATCAGGTTCATAAC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGATGAGCCTTCCACTTaGCGGAAGAATCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLDEPST*RKNLTG
Trigger: TCCTGTGAGATTCTTCCGCCAAGTGGAAGGCTCATC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409556.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAACTCCAGCGCTGACTTaGTTCAAGAGCTCTCACAAG +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPTPALT*FKSSHK
Trigger: CTTGTGAGAGCTCTTGAACCAAGTCAGCGCTGGAGT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409556.5
CDS-3UTR CCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCAACACAACTAGCACGTaGAAGGAAAAGAACTCAAAT +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSNTTST*KEKNSN
Trigger: ATTTGAGTTCTTTTCCTTCCACGTGCTAGTTGTGTT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp TTCCCCATTTCGCTCTTACAGAATGAACAATGTCTCCAACATCATAGAGTGCTTTCCAGACACCATCACTaGCTAAATGAAGAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: FPISLLQNEQCLQHHRVLSRHHH*LNEEKE
Trigger: TTCCTTCTCTTCATTTAGCCAGTGATGGTGTCTGGA...AAGCACTCTATGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAAATGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGACTTGAAGAGTTTTTaGTGCTGGGTTTCCATTTAT +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNDLKSF*CWVSIY
Trigger: ATAAATGGAAACCCAGCATCAAAAACTCTTCAAGTC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTCCTCACAGTTGACTTaGAGAGTTTTTGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVSSQLT*RVFDAG
Trigger: CCCAGCATCAAAAACTCTTCAAGTCAACTGTGAGGA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCTGTTATTCAACATGAATCAGTaGCGGATCAACAATTTTCAG +
Preference number: 4 (lower is better)
Translates to: FRRKPELLLLTGVKIVLLFNMNQ*RINNFQ
Trigger: CTGAAAATTGTTGATCCGTCACTGATTCATGTTGAA...TAACAGCACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATCTCCAGTTCCAATCTaGGAGGACTTTGAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPSPVPI*EDFESN
Trigger: GTTGCTCTCAAAGTCCTCTCAGATTGGAACTGGAGA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATCTCCAGTTCCAATCTaGGAGGACTTTGAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLSPVPI*EDFESN
Trigger: GTTGCTCTCAAAGTCCTCTCAGATTGGAACTGGAGA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTGTAACCTCCTGAAGTaGAAGAAGCGGCAAAACACA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVCNLLK*KKRQNT
Trigger: TGTGTTTTGCCGCTTCTTTCACTTCAGGAGGTTACA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGTGCTTTTCCAGGAATaGTCTGTGTGGGCATTAAGT +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVVLFQE*SVWALS
Trigger: ACTTAATGCCCACACAGATCATTCCTGGAAAAGCAC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCACCTTGTTTTCCTTGTTaGCATTCCCGCTGGTTAGGT +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPPCFPC*HSRWLG
Trigger: ACCTAACCAGCGGGAATGTCAACAAGGAAAACAAGG...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTCCGATCTTCAGGAGTaGTTAATCCATAAGCATTAT +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNSDLQE*LIHKHY
Trigger: ATAATGCTTATGGATTAATCACTCCTGAAGATCGGA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAGATATCGGAATTCCTaGGTAAGCCAGAAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVRYRNS*VSQKQC
Trigger: ACACTGCTTCTGGCTTACTCAGGAATTCCGATATCT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AAGAGATTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGGCACCTGCAAATAACTaGTTTGTAGTAACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: KRFRRKPELLLLTGVKIVAPANN*FVVTVL
Trigger: AAGAACAGTTACTACAAATCAGTTATTTGCAGGTGC...CACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp TTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCTGTTACATATCCAAGACTCATaGATGACTGAAGAATATCAG +
Preference number: 4 (lower is better)
Translates to: FRRKPELLLLTGVKIVLLHIQDS*MTEEYQ
Trigger: CTGATATTCTTCAGTCATTCATGAGTCTTGGATATG...TAACAGCACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp TTCCCCATTTCGCTCTTACAGAATGAACAATGTCTCCAACATCATAGAGTGCTTTGCCTTTACTTAATCTaGCTTACGAAACAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: FPISLLQNEQCLQHHRVLCLYLI*LTKQSQ
Trigger: TTGGGACTGTTTCGTAAGTCAGATTAAGTAAAGGCA...AAGCACTCTATGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAAATGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp AAGAGATTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGATCAAAGACTTCAGCTaGATGAACCAACAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: KRFRRKPELLLLTGVKIVIKDFS*MNQQKN
Trigger: ATTCTTCTGTTGGTTCATTCAGCTGAAGTCTTTGAT...CACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATATCAACAATTTTCAGTaGTGGAATCTCCTCACAGTT +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNINNFQ*WNLLTV
Trigger: AACTGTGAGGAGATTCCAGCACTGAAAATTGTTGAT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAGGAAGGCCAGTCAATaGTTGTGGAACAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPRKASQ*LWNRLQ
Trigger: TTGGAGTCTGTTCCACAAGCATTGACTGGCCTTCCT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGGCCAAGATGTACTTTaGTGTGTCCAAATCAATCCC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVGQDVL*CVQINP
Trigger: GGGATTGATTTGGACACAGCAAAGTACATCTTGGCC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCACGTATGGAGGACTGTaGTGGATTTGCTTAAAGGTG +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVTYGGL*WICLKV
Trigger: CACCTTTAAGCAAATCCAGCACAGTCCTCCATACGT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTGAAGTCGTCTTATTTTaGACCAAAGAGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: DKQERKPADKLYSAHHFVEVVLF*TKEAKM
Trigger: CATCTTTGCCTCTTTGGTGCAAAATAAGACGACTTC...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTTACTCTATGTACCATaGTGGTTTAAAATGACCAGT +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSLLYVP*WFKMTS
Trigger: ACTGGTCATTTTAAACCAGCATGGTACATAGAGTAA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCACTTCTTCAACTTAAGTaGCCCCATTGGCAGAAGACG +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPLLQLK*PHWQKT
Trigger: CGTCTTCTGCCAATGGGGGCACTTAAGTTGAAGAAG...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp GGCTTTGAAAAGAGTTTGAATTGCCTGTTTGAACAAGGGCAGTTTGCCTTTATTAGCGAACAGAAGTTATaGATCCCAAACCAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: GFEKSLNCLFEQGQFAFISEQKL*IPNQLC
Trigger: ACAAAGCTGGTTTGGGATCCATAACTTCTGTTCGCT...AATAAAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTCAAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCAAACCACTGAGTAGATaGGTCCAAGCTATAAATTTT +
Preference number: 4 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSKPLSR*VQAINF
Trigger: AAAATTTATAGCTTGGACCCATCTACTCAGTGGTTT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAGTACTTTGCTGTCTTaGGTCCTTACTAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVSTLLS*VLTRWS
Trigger: ACTCCACCTAGTAAGGACCCAAGACAGCAAAGTACT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTATGGAGGACTGTGCTaGATTTGCTTAAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVYGGLC*ICLKVG
Trigger: TCCCACCTTTAAGCAAATCCAGCACAGTCCTCCATA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAGTTGCTCTTATTGTTaGGGTCTTGCAAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVSCSYC*GLASTA
Trigger: TGCTGTGCTTGCAAGACCCCAACAATAAGAGCAACT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTTATGAACCTGATGTaGAGCTCCTGCCGGGATAAA +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPVMNLM*SSCRDK
Trigger: TTTATCCCGGCAGGAGCTCCACATCAGGTTCATAAC...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTCCCCATTTCGCTCTTACAGAATGAACAATGTCTCCAACATCATAGAGTGCTTTCCTCTAAACAGTGTTaGCAGTTCATAAATGTCAGG +
Preference number: 4 (lower is better)
Translates to: FPISLLQNEQCLQHHRVLSSKQC*QFINVR
Trigger: CCTGACATTTATGAACTGCCAACACTGTTTAGAGGA...AAGCACTCTATGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAAATGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CAA 72 bp GAAGAATTCAAGAGATTCCGGAGGAAACCAGAATTGTaGTTGCTTACGGGTGTCAAAATTGTGCTGTTAAAC +
Preference number: 4 (lower is better)
Translates to: EEFKRFRRKPEL*LLTGVKIVLLN
Trigger: GTTTAACAGCACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTTGAATTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
3UTR CAA 72 bp CAAGCCAGTCAGTTCACCACATGTAGTAACATAATATaGCTATTCCTTATGCCTCTGTTCACACATGCCATA +
Preference number: 4 (lower is better)
Translates to: QASQFTTCSNII*LFLMPLFTHAI
Trigger: TATGGCATGTGTGAACAGAGGCATAAGGAATAGCAATATTATGTTACTACATGTGGTGAACTGACTGGCTTG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR TCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATCCTCACAGTTGACTTaGAGAGTTTTTGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLSSQLT*RVFDAG
Trigger: CCCAGCATCAAAAACTCTTCAAGTCAACTGTGAGGA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATGTAACCTCCTGAAGTaGAAGAAGCGGCAAAACACA +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLCNLLK*KKRQNT
Trigger: TGTGTTTTGCCGCTTCTTTCACTTCAGGAGGTTACA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATGTAACCTCCTGAAGTaGAAGAAGCGGCAAAACACA +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPCNLLK*KKRQNT
Trigger: TGTGTTTTGCCGCTTCTTTCACTTCAGGAGGTTACA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTCAGAAATCACCATTTaGCAGAAGTGGTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVSEITI*QKWSPM
Trigger: CATTGGAGACCACTTCTGTCAAATGGTGATTTCTGA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGTGCTTTTCCAGGAATaGTCTGTGTGGGCATTAAGT +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLVLFQE*SVWALS
Trigger: ACTTAATGCCCACACAGATCATTCCTGGAAAAGCAC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTTTGAATTGCCTGTTTaGACAAGGGCAGTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVFELPV*TRAVCL
Trigger: AAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCACCAAACTCTTTCCTaGAGGATTCAGGTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVHQTLS*RIQVSK
Trigger: TTTGGAAACCTGAATCCTTCAGGAAAGAGTTTGGTG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAGATATCGGAATTCCTaGGTAAGCCAGAAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPRYRNS*VSQKQC
Trigger: ACACTGCTTCTGGCTTACTCAGGAATTCCGATATCT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTCCCCATTTCGCTCTTACAGAATGAACAATGTCTCCAACATCATAGAGTGCTTATCAACAAAAACACTTaGTTTAACTGTGTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: FPISLLQNEQCLQHHRVLINKNT*FNCVEG
Trigger: CCCCTCTACACAGTTAAATCAAGTGTTTTTGTTGAT...AAGCACTCTATGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAAATGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp GGCTTTGAAAAGAGTTTGAATTGCCTGTTTGAACAAGGGCAGTTTGCCTTTATTTACAGCTCCAATTCTTaGAGAATTACCACATGTCAC +
Preference number: 4 (lower is better)
Translates to: GFEKSLNCLFEQGQFAFIYSSNS*RITTCH
Trigger: GTGACATGTGGTAATTCTGCAAGAATTGGAGCTGTA...AATAAAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTCAAAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGCATTTAGGCAACTGTaGCACGATGTTCACACAAGA +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLAFRQL*HDVHTR
Trigger: TCTTGTGTGAACATCGTGGCACAGTTGCCTAAATGC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGCATTTAGGCAACTGTaGCACGATGTTCACACAAGA +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPAFRQL*HDVHTR
Trigger: TCTTGTGTGAACATCGTGGCACAGTTGCCTAAATGC...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAACGTATGGAGGACTGTaGTGGATTTGCTTAAAGGTG +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLTYGGL*WICLKV
Trigger: CACCTTTAAGCAAATCCAGCACAGTCCTCCATACGT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAGGACTTCTTCTTCTTaGTCACACTGTCCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLRTSSS*SHCPLG
Trigger: TCCCAAAGGACAGTGTGAGCAAGAAGAAGAAGTCCT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAATATATGTGCCACAGTaGTCCTGGCTTCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLIYVPQ*SWLLFS
Trigger: GGAAAAGAGAAGCCAGGAGCACTGTGGCACATATAT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAATATATGTGCCACAGTaGTCCTGGCTTCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPIYVPQ*SWLLFS
Trigger: GGAAAAGAGAAGCCAGGAGCACTGTGGCACATATAT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAATAGGATCGTGGTCTaGTGGGTTTTCTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPNRIVV*WVFLTL
Trigger: CAAGGTCAAGAAAACCCAGCAGACCACGATCCTATT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATACAGTAGTTGATTTCTaGTATATAATGCCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNTVVDF*YIMPVL
Trigger: TAGGACTGGCATTATATAGCAGAAATCAACTACTGT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCTGTTAACAGTAGTTGATTTCTaGTATATAATGCCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: FRRKPELLLLTGVKIVLLTVVDF*YIMPVL
Trigger: TAGGACTGGCATTATATAGCAGAAATCAACTACTGT...TAACAGCACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp GGCTTTGAAAAGAGTTTGAATTGCCTGTTTGAACAAGGGCAGTTTGCCTTTATTATATTACAAGTCTTCTaGTCTCCCATCCTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: GFEKSLNCLFEQGQFAFIILQVF*SPILPY
Trigger: ATAAGGCAGGATGGGAGAGCAGAAGACTTGTAATAT...AATAAAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTCAAAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAGCGAACAGAAGTTATaGATCCCAAACCAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVSEQKL*IPNQLC
Trigger: ACAAAGCTGGTTTGGGATCCATAACTTCTGTTCGCT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATAAACCACTGAGTAGATaGGTCCAAGCTATAAATTTT +
Preference number: 4 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNKPLSR*VQAINF
Trigger: AAAATTTATAGCTTGGACCCATCTACTCAGTGGTTT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTGCTTTGCAGACATCTaGTTTTGTTCTCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVCFADI*FCSQSF
Trigger: GAAGCTCTGAGAACAAAACCAGATGTCTGCAAAGCA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGCCAGTCAATGCTTGTaGAACAGACTCCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPASQCL*NRLQSV
Trigger: AACAGATTGGAGTCTGTTCCACAAGCATTGACTGGC...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGCCAGTCAATGCTTGTaGAACAGACTCCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLASQCL*NRLQSV
Trigger: AACAGATTGGAGTCTGTTCCACAAGCATTGACTGGC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATCAAAACCGACTTCCTaGATGGGGCATTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLSKPTS*MGHSGF
Trigger: AAATCCAGAATGCCCCATCCAGGAAGTCGGTTTTGA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp GGCTTTGAAAAGAGTTTGAATTGCCTGTTTGAACAAGGGCAGTTTGCCTTTATTCTTTTTGAGTTTAGCTaGGTCTGTCAAAACCGACTT +
Preference number: 4 (lower is better)
Translates to: GFEKSLNCLFEQGQFAFILFEFS*VCQNRL
Trigger: AAGTCGGTTTTGACAGACCCAGCTAAACTCAAAAAG...AATAAAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTCAAAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAGTGGTCTCCAATGTTaGCCAAGATGTACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLSGLQC*PRCTLL
Trigger: CAGCAAAGTACATCTTGGCCAACATTGGAGACCACT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATATGGAGGACTGTGCTaGATTTGCTTAAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLYGGLC*ICLKVG
Trigger: TCCCACCTTTAAGCAAATCCAGCACAGTCCTCCATA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGTGCTGTTAAACGTATaGAGGACTGTGCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLVLLNV*RTVLDL
Trigger: CAAATCCAGCACAGTCCTCCATACGTTTAACAGCAC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAAGGTTTGCCAAAACTaGATTCACTGGCTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVKVCQN*IHWLSA
Trigger: TGCTGAAAGCCAGTGAATCCAGTTTTGGCAAACCTT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAGAAATACTCTTTGTTaGTCTCCCAGAAAGCGAACA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVRNTLC*SPRKRT
Trigger: TGTTCGCTTTCTGGGAGATCAACAAAGAGTATTTCT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGAATCTCCTCACAGTTaGCTTGAAGAGTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVESPHS*LEEFLM
Trigger: CATCAAAAACTCTTCAAGTCAACTGTGAGGAGATTC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTGTACAACTTCAACATaGATCAGTGACGGATCAACA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVCTTST*ISDGST
Trigger: TGTTGATCCGTCACTGATTCATGTTGAAGTTGTACA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATCCAATCTGTTTTCCTaGTCAGTGTTTGTCTTAGGC +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPSNLFS*SVFVLG
Trigger: GCCTAAGACAAACACTGATCAGGAAAACAGATTGGA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATCAGAAATCACCATTTaGCAGAAGTGGTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLSEITI*QKWSPM
Trigger: CATTGGAGACCACTTCTGTCAAATGGTGATTTCTGA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATCAGAAATCACCATTTaGCAGAAGTGGTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPSEITI*QKWSPM
Trigger: CATTGGAGACCACTTCTGTCAAATGGTGATTTCTGA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTGTGGCTCAATAGTTaGCATAGCTTCCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPVWLNS*HSFLFR
Trigger: TCTGAAAAGGAAGCTATGTCAACTATTGAGCCACAC...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTTCGCTCTTACAGAATaGACAATGTCTCCAACATCA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVFALTE*TMSPTS
Trigger: TGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATTTGAATTGCCTGTTTaGACAAGGGCAGTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLFELPV*TRAVCL
Trigger: AAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTTGATGGTTAGTCCTTaGGGCCTCTTAGATAAATCA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVLMVSP*GLLDKS
Trigger: TGATTTATCTAAGAGGCCTCAAGGACTAACCATCAA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAAGACTTCAGCTGAATaGACCAACAGAAGAATGACG +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLKTSAE*TNRRMT
Trigger: CGTCATTCTTCTGTTGGTTCATTCAGCTGAAGTCTT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTACAGCTCCAATTCTTaGAGAATTACCACATGTCAC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVYSSNS*RITTCH
Trigger: GTGACATGTGGTAATTCTGCAAGAATTGGAGCTGTA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGAAAAGAGTTTGAATTaGCTGTTTGAACAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVEKSLN*LFEQGQ
Trigger: CTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGAAGTCGTCTTATTTTaGACCAAAGAGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVEVVLF*TKEAKM
Trigger: CATCTTTGCCTCTTTGGTGCAAAATAAGACGACTTC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGCTGATACGAGGTTTTaGTTTTACAGCCTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVADTRF*FYSLVK
Trigger: TTTTACCAGGCTGTAAAAGCAAAACCTCGTATCAGC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAGCGAACAGAAGTTATaGATCCCAAACCAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPSEQKL*IPNQLC
Trigger: ACAAAGCTGGTTTGGGATCCATAACTTCTGTTCGCT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAACAATTTTCAGTGCTaGAATCTCCTCACAGTTGAC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVNNFQC*NLLTVD
Trigger: GTCAACTGTGAGGAGATTCCAGCACTGAAAATTGTT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATGCTTTGCAGACATCTaGTTTTGTTCTCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLCFADI*FCSQSF
Trigger: GAAGCTCTGAGAACAAAACCAGATGTCTGCAAAGCA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAGTACAGCTGCCTTTTaGCTCAGTCAGAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVSTAAF*LSQNFQ
Trigger: TTGAAAATTCTGACTGAGCCAAAAGGCAGCTGTACT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAACCGACTTCCTGGATaGGGCATTCTGGATTTTATT +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPNRLPG*GILDFI
Trigger: AATAAAATCCAGAATGCCCCATCCAGGAAGTCGGTT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAACCGACTTCCTGGATaGGGCATTCTGGATTTTATT +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLNRLPG*GILDFI
Trigger: AATAAAATCCAGAATGCCCCATCCAGGAAGTCGGTT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATCCCCACAACGTTTTTaGTTAAAGGTAACCACAAGC +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPSPQRF*LKVTTS
Trigger: GCTTGTGGTTACCTTTAACCAAAAACGTTGTGGGGA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTCAGAATCTCCATCTTaGATGGTCTTAAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVSESPS*MVLRTS
Trigger: AGAAGTCCTTAAGACCATCCAAGATGGAGATTCTGA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAAGGTTTGCCAAAACTaGATTCACTGGCTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPKVCQN*IHWLSA
Trigger: TGCTGAAAGCCAGTGAATCCAGTTTTGGCAAACCTT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAAGGTTTGCCAAAACTaGATTCACTGGCTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLKVCQN*IHWLSA
Trigger: TGCTGAAAGCCAGTGAATCCAGTTTTGGCAAACCTT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAATTTATAACGGTTGCTaGAAACCACTGAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLIYNGC*KPLSRW
Trigger: CCATCTACTCAGTGGTTTTCAGCAACCGTTATAAAT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGAATCTCCTCACAGTTaGCTTGAAGAGTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPESPHS*LEEFLM
Trigger: CATCAAAAACTCTTCAAGTCAACTGTGAGGAGATTC...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATCTGGTTCATGTATCTaGCTCTTCACACATTTTAGC +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPSGSCI*LFTHFS
Trigger: GCTAAAATGTGTGAAGAGTCAGATACATGAACCAGA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATTCGCTCTTACAGAATaGACAATGTCTCCAACATCA +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPFALTE*TMSPTS
Trigger: TGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATTGATGGTTAGTCCTTaGGGCCTCTTAGATAAATCA +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLLMVSP*GLLDKS
Trigger: TGATTTATCTAAGAGGCCTCAAGGACTAACCATCAA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTCCGATCTTCAGGAGTaGTTAATCCATAAGCATTAT +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVSDLQE*LIHKHY
Trigger: ATAATGCTTATGGATTAATCACTCCTGAAGATCGGA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAGTTGTCCAAACAGCTaGAGAATAACTGCAGGTATT +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPSCPNS*RITAGI
Trigger: AATACCTGCAGTTATTCTTCAGCTGTTTGGACAACT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAGACTCATGAATGACTaGAGAATATCAGCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLRLMND*RISAKD
Trigger: GTCTTTGGCTGATATTCTTCAGTCATTCATGAGTCT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATACAGCTCCAATTCTTaGAGAATTACCACATGTCAC +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPYSSNS*RITTCH
Trigger: GTGACATGTGGTAATTCTGCAAGAATTGGAGCTGTA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTATTCTCAGAAGACTTaGGTTTTACAGCTCCAATTC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVYSQKT*VLQLQF
Trigger: GAATTGGAGCTGTAAAACGCAAGTCTTCTGAGAATA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAATCACTATTGACACCTaGTTTCACTTCTGGTGCATT +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPITIDT*FHFWCI
Trigger: AATGCACCAGAAGTGAAAGCAGGTGTCAATAGTGAT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGAAAAGAGTTTGAATTaGCTGTTTGAACAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLEKSLN*LFEQGQ
Trigger: CTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGAAGTCGTCTTATTTTaGACCAAAGAGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLEVVLF*TKEAKM
Trigger: CATCTTTGCCTCTTTGGTGCAAAATAAGACGACTTC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAATTCATTTCCAATGTaGAGGGAGATTAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVNSFPM*REIKVC
Trigger: GCAAACCTTAATCTCCCTGCACATTGGAAATGAATT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCCATACAATAAGAACTaGAACATTAGCTGTCACTTC +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVPYNKN*NISCHF
Trigger: GAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAACAATTTTCAGTGCTaGAATCTCCTCACAGTTGAC +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLNNFQC*NLLTVD
Trigger: GTCAACTGTGAGGAGATTCCAGCACTGAAAATTGTT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTACTTTTTGAGTTTAGCTaGGTCTGTCAAAACCGACTT +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLLFEFS*VCQNRL
Trigger: AAGTCGGTTTTGACAGACCCAGCTAAACTCAAAAAG...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATCAGAATCTCCATCTTaGATGGTCTTAAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLSESPS*MVLRTS
Trigger: AGAAGTCCTTAAGACCATCCAAGATGGAGATTCTGA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGACTTGAAGAGTTTTTaGTGCTGGGTTTCCATTTAT +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLDLKSF*CWVSIY
Trigger: ATAAATGGAAACCCAGCATCAAAAACTCTTCAAGTC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR TCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATTCAACATGAATCAGTaGCGGATCAACAATTTTCAG +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPFNMNQ*RINNFQ
Trigger: CTGAAAATTGTTGATCCGTCACTGATTCATGTTGAA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAATCAACAATTTTCAGTaGTGGAATCTCCTCACAGTT +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPINNFQ*WNLLTV
Trigger: AACTGTGAGGAGATTCCAGCACTGAAAATTGTTGAT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAATCAACAATTTTCAGTaGTGGAATCTCCTCACAGTT +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLINNFQ*WNLLTV
Trigger: AACTGTGAGGAGATTCCAGCACTGAAAATTGTTGAT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATATTCTCAGAAGACTTaGGTTTTACAGCTCCAATTC +
Preference number: 4 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPYSQKT*VLQLQF
Trigger: GAATTGGAGCTGTAAAACGCAAGTCTTCTGAGAATA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATATTCTCAGAAGACTTaGGTTTTACAGCTCCAATTC +
Preference number: 4 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLYSQKT*VLQLQF
Trigger: GAATTGGAGCTGTAAAACGCAAGTCTTCTGAGAATA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR GCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCACAGTAGTTGATTTCTaGTATATAATGCCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVTVVDF*YIMPVL
Trigger: TAGGACTGGCATTATATAGCAGAAATCAACTACTGT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CCA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAAACCACTGAGTAGATaGGTCCAAGCTATAAATTTT +
Preference number: 4 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVKPLSR*VQAINF
Trigger: AAAATTTATAGCTTGGACCCATCTACTCAGTGGTTT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS CCA 90 bp GAGAGCCAGGGCCACTCGGCGACGCGCTCCACGTCCCAGCTGTCGTaGCTGCCATCGCTGCCGTCGGCTGCGGACAGACTGAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: ESQGHSATRSTSQLS*LPSLPSAADRLRNL
Trigger: GAGGTTTCTCAGTCTGTCCGCAGCCGACGGCAGCGATGGCAGCCACGACAGCTGGGACGTGGAGCGCGTCGCCGAGTGGCCCTGGCTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000427678.1
ENST00000441719.5
ENST00000452034.5
CDS CCA 90 bp GGCTCGTGCGCAGGCGCCTCGCCGAGCTTAGGCTGCTGGGCGAAATaGCTGCGGGAGGCGCAGGCGCACGTGGTACTGATCGTGGAACGT +
Preference number: 5 (lower is better)
Translates to: GSCAGASPSLGCWAK*LREAQAHVVLIVER
Trigger: ACGTTCCACGATCAGTACCACGTGCGCCTGCGCCTCCCGCAGCCATTTCGCCCAGCAGCCTAAGCTCGGCGAGGCGCCTGCGCACGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452034.5
CDS CCA 90 bp TGCTCTGGAGGCTCGTGCGCAGGCGCCTCGCCGAGCTTAGGCTGCTaGGCGAAATGGCTGCGGGAGGCGCAGGCGCACGTGGTACTGATC +
Preference number: 5 (lower is better)
Translates to: CSGGSCAGASPSLGC*AKWLREAQAHVVLI
Trigger: GATCAGTACCACGTGCGCCTGCGCCTCCCGCAGCCATTTCGCCCAGCAGCCTAAGCTCGGCGAGGCGCCTGCGCACGAGCCTCCAGAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452034.5
CDS TCA 90 bp ACCGGCGGCAGCCGCCGTTTCCAGCCGCCTAGCCGACTCCAGCGCTaGCTTGGTTCAAGAGCTCTCACAAGACACGCACAGCCTCCCGGA +
Preference number: 5 (lower is better)
Translates to: TGGSRRFQPPSRLQR*LGSRALTRHAQPPG
Trigger: TCCGGGAGGCTGTGCGTGTCTTGTGAGAGCTCTTGAACCAAGTCAGCGCTGGAGTCGGCTAGGCGGCTGGAAACGGCGGCTGCCGCCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409556.5
CDS GCA 90 bp GCGCTCCACGTCCCAGCTGTCGTGGCTGCCATCGCTGCCGTCGGCTaGGGACAGACTGAGAAACCTCCTCCCCACCAATACCGGCCAACT +
Preference number: 5 (lower is better)
Translates to: ALHVPAVVAAIAAVG*GQTEKPPPHQYRPT
Trigger: AGTTGGCCGGTATTGGTGGGGAGGAGGTTTCTCAGTCTGTCCGCAGCCGACGGCAGCGATGGCAGCCACGACAGCTGGGACGTGGAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000427678.1
ENST00000441719.5
ENST00000452034.5
CDS CCA 90 bp TGCGGTTTCAGGCGTACTCAGCTAGAGGGAGGAGCGATAGTGCTCTaGAGGCTCGTGCGCAGGCGCCTCGCCGAGCTTAGGCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: CGFRRTQLEGGAIVL*RLVRRRLAELRLLG
Trigger: GCCCAGCAGCCTAAGCTCGGCGAGGCGCCTGCGCACGAGCCTCCAGAGCACTATCGCTCCTCCCTCTAGCTGAGTACGCCTGAAACCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452034.5
CDS TCA 90 bp CCCAGCTGTCGTGGCTGCCATCGCTGCCGTCGGCTGCGGACAGACTaGGAAACCTCCTCCCCACCAATACCGGCCAACTTTCTCCGAGCG +
Preference number: 5 (lower is better)
Translates to: PSCRGCHRCRRLRTD*ETSSPPIPANFLRA
Trigger: CGCTCGGAGAAAGTTGGCCGGTATTGGTGGGGAGGAGGTTTCTCAGTCTGTCCGCAGCCGACGGCAGCGATGGCAGCCACGACAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000427678.1
ENST00000441719.5
ENST00000452034.5
CDS GCA 90 bp AGCCTCAGCAGGACTGGCTGCCTGCTGATCCAGCCAGTGCCACAGTaGAAAACGAGCAAGGAAATAACTGCTGCCCAGCCACTGGCCCAA +
Preference number: 5 (lower is better)
Translates to: SLSRTGCLLIQPVPQ*KTSKEITAAQPLAQ
Trigger: TTGGGCCAGTGGCTGGGCAGCAGTTATTTCCTTGCTCGTTTTGCACTGTGGCACTGGCTGGATCAGCAGGCAGCCAGTCCTGCTGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS GCA 90 bp TCAGTCTCTGAGGGGCTCGAGGGACAGGACCTCGAGAGAGCACACTaGAGACCCACAGCACATGGAGGACTCACCAACAGAGACCTGAGA +
Preference number: 5 (lower is better)
Translates to: SVSEGLEGQDLERAH*RPTAHGGLTNRDLR
Trigger: TCTCAGGTCTCTGTTGGTGAGTCCTCCATGTGCTGTGGGTCTGCAGTGTGCTCTCTCGAGGTCCTGTCCCTCGAGCCCCTCAGAGACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491383.5
CDS GCA 90 bp GCTGATCCAGCCAGTGCCACAGTGCAAAACGAGCAAGGAAATAACTaGTGCCCAGCCACTGGCCCAAAGTCCACTGGATCCCAGTCATGG +
Preference number: 5 (lower is better)
Translates to: ADPASATVQNEQGNN*CPATGPKSTGSQSW
Trigger: CCATGACTGGGATCCAGTGGACTTTGGGCCAGTGGCTGGGCAGCAGTTATTTCCTTGCTCGTTTTGCACTGTGGCACTGGCTGGATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS CCA 90 bp GTTCTTCAACCGCGTAGGCTGTCGACCGAAGATGAGCCTTCCACTTaGCGGAAGAATCTCACAGGAAAGGGTGAGGGCGGTGCAGGGTTA +
Preference number: 5 (lower is better)
Translates to: VLQPRRLSTEDEPST*RKNLTGKGEGGAGL
Trigger: TAACCCTGCACCGCCCTCACCCTTTCCTGTGAGATTCTTCCGCCAAGTGGAAGGCTCATCTTCGGTCGACAGCCTACGCGGTTGAAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409556.5
ENST00000452034.5
CDS TCA 90 bp AAGTTTGCCCAAGATCCCAACCATGCAGCTGCTTTAATCAGTCTCTaGGGGGCTCGAGGGACAGGACCTCGAGAGAGCACACTGCAGACC +
Preference number: 5 (lower is better)
Translates to: KFAQDPNHAAALISL*GARGTGPRESTLQT
Trigger: GGTCTGCAGTGTGCTCTCTCGAGGTCCTGTCCCTCGAGCCCCTCAGAGACTGATTAAAGCAGCTGCATGGTTGGGATCTTGGGCAAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491383.5
CDS GCA 90 bp GATCCAGCCAGTGCCACAGTGCAAAACGAGCAAGGAAATAACTGCTaGCCAGCCACTGGCCCAAAGTCCACTGGATCCCAGTCATGGGTA +
Preference number: 5 (lower is better)
Translates to: DPASATVQNEQGNNC*PATGPKSTGSQSWV
Trigger: TACCCATGACTGGGATCCAGTGGACTTTGGGCCAGTGGCTGGGCAGCAGTTATTTCCTTGCTCGTTTTGCACTGTGGCACTGGCTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS GCA 90 bp CTTGCGGAGACTGTCCAAGCGACACTCTCGGCATTTAGGCAACTGTaGCACGATGTTCACACAAGAATCATCCTGTACGAAGGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: LAETVQATLSAFRQL*HDVHTRIILYEGLA
Trigger: GGCGAGGCCTTCGTACAGGATGATTCTTGTGTGAACATCGTGGCACAGTTGCCTAAATGCCGAGAGTGTCGCTTGGACAGTCTCCGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS TCA 90 bp AGACAGTCCTGGTGGGACACAGCACCGGCATTAATGAAGCGTGTCTaGACAACCCTAAGCCCATTATTAAAGCCAGGCAGCCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: RQSWWDTAPALMKRV*TTLSPLLKPGSQEL
Trigger: CAGCTCCTGGCTGCCTGGCTTTAATAATGGGCTTAGGGTTGTTCAGACACGCTTCATTAATGCCGGTGCTGTGTCCCACCAGGACTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498528.1
CDS CCA 90 bp AAGGTTAGGTGGAGAGTTGGCAGCCTGGGGAGTACTTTGCTGTCTTaGGTCCTTACTAGGTGGAGTTGCCGCAGTACAGCCAAGCAGTAT +
Preference number: 5 (lower is better)
Translates to: KVRWRVGSLGSTLLS*VLTRWSCRSTAKQY
Trigger: ATACTGCTTGGCTGTACTGCGGCAACTCCACCTAGTAAGGACCCAAGACAGCAAAGTACTCCCCAGGCTGCCAACTCTCCACCTAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS CCA 90 bp CACTTTGGGCAACCCATTGTAACACCAGGACTCTGCTTCTTAGACTaGGCAGTAGGGAGAAGCACAGCTTGTAGTGAGCAAGCAGCGGCT +
Preference number: 5 (lower is better)
Translates to: HFGQPIVTPGLCFLD*AVGRSTACSEQAAA
Trigger: AGCCGCTGCTTGCTCACTACAAGCTGTGCTTCTCCCTACTGCCCAGTCTAAGAAGCAGAGTCCTGGTGTTACAATGGGTTGCCCAAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS-3UTR CAA 90 bp GAGCTCCCAAAGCACCTCCAACCTTCACCATTCATCTGCTACACACCCTTGCTCTGTTGCTCCTTATCCTaGCGGAGACTGTCCAAGCGA +
Preference number: 5 (lower is better)
Translates to: ELPKHLQPSPFICYTPLLCCSLS*RRLSKR
Trigger: TCGCTTGGACAGTCTCCGCAAGGATAAGGAGCAACA...GAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTGCTTTGGGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGCTCCCAAAGCACCTCCAACCTTCACCATTCATCTGCTACACACCCTTGCTCCTGTCACTTCCTCCATaGCTCTTCTGGACCCTAAGG +
Preference number: 5 (lower is better)
Translates to: ELPKHLQPSPFICYTPLLLSLPP*LFWTLR
Trigger: CCTTAGGGTCCAGAAGAGCAATGGAGGAAGTGACAG...GAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTGCTTTGGGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS TCA 90 bp GATTCAGTTCTGCTCTACCTAAGAGTGATGAGAACACTGCAGCACTaGAGGTTAAGCACTGTGTTCAAGACCCCGACAGGCAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: DSVLLYLRVMRTLQH*RLSTVFKTPTGSWA
Trigger: GGCCCAGCTGCCTGTCGGGGTCTTGAACACAGTGCTTAACCTTCAGTGCTGCAGTGTTCTCATCACTCTTAGGTAGAGCAGAACTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491383.5
CDS-3UTR CAA 90 bp GAGTGTTCCTTTAGCAAAGACCCTATCTGGCCAAACAGAGAAGCCAGAGATCCACAACAACACTGCCCTTaGAAGCAGGCACCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: ECSFSKDPIWPNREARDPQQHCP*KQAPGD
Trigger: GTCCCCAGGTGCCTGCTTCAAAGGGCAGTGTTGTTG...TGGATCTCTGGCTTCTCTGTTTGGCCAGATAGGGTCTTTGCTAAAGGAACACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS GCA 90 bp TTACCCTGCAGTCACTTTGGGCAACCCATTGTAACACCAGGACTCTaGTTCTTAGACTGGGCAGTAGGGAGAAGCACAGCTTGTAGTGAG +
Preference number: 5 (lower is better)
Translates to: LPCSHFGQPIVTPGL*FLDWAVGRSTACSE
Trigger: CTCACTACAAGCTGTGCTTCTCCCTACTGCCCAGTCTAAGAAGCAGAGTCCTGGTGTTACAATGGGTTGCCCAAAGTGACTGCAGGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS GCA 90 bp CCAAAAGGACATCTGCTAGATCAAGTGAGCTCAGGCTTTGATTGTTaGCACAGCCTAGGAGTTCTGGGGCAAGAGACAAAGCCCAAGGAC +
Preference number: 5 (lower is better)
Translates to: PKGHLLDQVSSGFDC*HSLGVLGQETKPKD
Trigger: GTCCTTGGGCTTTGTCTCTTGCCCCAGAACTCCTAGGCTGTGGCAACAATCAAAGCCTGAGCTCACTTGATCTAGCAGATGTCCTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS CCA 90 bp GTTGGCAGCCTGGGGAGTACTTTGCTGTCTTGGGTCCTTACTAGGTaGAGTTGCCGCAGTACAGCCAAGCAGTATCTCCTTAAAAACTGT +
Preference number: 5 (lower is better)
Translates to: VGSLGSTLLSWVLTR*SCRSTAKQYLLKNC
Trigger: ACAGTTTTTAAGGAGATACTGCTTGGCTGTACTGCGGCAACTCCACCTAGTAAGGACCCAAGACAGCAAAGTACTCCCCAGGCTGCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS-3UTR CAA 90 bp GAGCTCCCAAAGCACCTCCAACCTTCACCATTCATCTGCTACACACCCTTGCTCGAGAGCAACCCTGCTTaGCAGACATCTGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: ELPKHLQPSPFICYTPLLESNPA*QTSGFV
Trigger: AACAAAACCAGATGTCTGCAAAGCAGGGTTGCTCTC...GAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTGCTTTGGGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCAGTTTGCCATCTCGCCTaGTGTACTCGGGCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPVCHLA*CTRAVE
Trigger: TTCCACTGCCCGAGTACACAAGGCGAGATGGCAAAC...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGCTGGGCGAGGTGGATaGTTCTTCAACCGCGTAGGC +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSAGRGG*FFNRVG
Trigger: GCCTACGCGGTTGAAGAACAATCCACCTCGCCCAGC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409556.5
CDS TCA 90 bp GGATTTGCCAAAAGGACATCTGCTAGATCAAGTGAGCTCAGGCTTTaGTTGTTGCCACAGCCTAGGAGTTCTGGGGCAAGAGACAAAGCC +
Preference number: 5 (lower is better)
Translates to: GFAKRTSARSSELRL*LLPQPRSSGARDKA
Trigger: GGCTTTGTCTCTTGCCCCAGAACTCCTAGGCTGTGGCAACAATCAAAGCCTGAGCTCACTTGATCTAGCAGATGTCCTTTTGGCAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS GCA 90 bp ACTTACAGGCCCTACCTAACGCTAACAAAAATACTCCTCCTCCTCTaGAGTAAAGATGAGACAGTCCTGGTGGGACACAGCACCGGCATT +
Preference number: 5 (lower is better)
Translates to: TYRPYLTLTKILLLL*SKDETVLVGHSTGI
Trigger: AATGCCGGTGCTGTGTCCCACCAGGACTGTCTCATCTTTACTGCAGAGGAGGAGGAGTATTTTTGTTAGCGTTAGGTAGGGCCTGTAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498528.1
CDS-3UTR CAA 90 bp GAGCTCCCAAAGCACCTCCAACCTTCACCATTCATCTGCTACACACCCTTGCTCTGCAGACATCTGGTTTaGTTCTCAGAGCTTCAGACT +
Preference number: 5 (lower is better)
Translates to: ELPKHLQPSPFICYTPLLCRHLV*FSELQT
Trigger: AGTCTGAAGCTCTGAGAACAAAACCAGATGTCTGCA...GAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTGCTTTGGGAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCACACCCAGTGCAGGTaGAAGATGGTGGTGTCGCAC +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSHTQCR*KMVVSH
Trigger: GTGCGACACCACCATCTTCAACCTGCACTGGGTGTG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATCACACCCAGTGCAGGTaGAAGATGGTGGTGTCGCAC +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNHTQCR*KMVVSH
Trigger: GTGCGACACCACCATCTTCAACCTGCACTGGGTGTG...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCACGGAGGAAACCAGAATaGTTGTTGCTTACGGGTGTC +
Preference number: 5 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPRRKPE*LLLTGV
Trigger: GACACCCGTAAGCAACAACAATTCTGGTTTCCTCCG...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGTTTGCCATCTCGCCTaGTGTACTCGGGCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSVCHLA*CTRAVE
Trigger: TTCCACTGCCCGAGTACACAAGGCGAGATGGCAAAC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCTGACCCCACCGTACTaGAGCCTGTTATTGCCAAGC +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSLTPPY*SLLLPS
Trigger: GCTTGGCAATAACAGGCTCAAGTACGGTGGGGTCAG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS GCA 90 bp ATGTTCACACAAGAATCATCCTGTACGAAGGCCTCGCCACTCTGTTaGAGCTTTTTGAGTTTAGCTGGGTCTGTCAAAACCGACTTCCTG +
Preference number: 5 (lower is better)
Translates to: MFTQESSCTKASPLC*SFLSLAGSVKTDFL
Trigger: CAGGAAGTCGGTTTTGACAGACCCAGCTAAACTCAAAAAGCTGCAACAGAGTGGCGAGGCCTTCGTACAGGATGATTCTTGTGTGAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS CCA 90 bp CAAAAACAGCAGGAAATGGAAGTGGTTAAAGCAGGCTTCCGAAGCTaGGATTTGCCAAAAGGACATCTGCTAGATCAAGTGAGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: QKQQEMEVVKAGFRS*DLPKGHLLDQVSSG
Trigger: GCCTGAGCTCACTTGATCTAGCAGATGTCCTTTTGGCAAATCCCAGCTTCGGAAGCCTGCTTTAACCACTTCCATTTCCTGCTGTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS-3UTR CAA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGACCTTCAGATCCTTCTaGGTAACGTCGGTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: KISLLTARRTVKKTSAGRTFRSF*VTSVWE
Trigger: TTCCCACACCGACGTTACCAAGAAGGATCTGAAGGT...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGCTCCCAAAGCACCTCCAACCTTCACCATTCATCTGCTACACACCCTTGCTCAAGAAATACTCTTTGTaGATCTCCCAGAAAGCGAAC +
Preference number: 5 (lower is better)
Translates to: ELPKHLQPSPFICYTPLLKKYSL*ISQKAN
Trigger: GTTCGCTTTCTGGGAGATCAACAAAGAGTATTTCTT...GAGCAAGGGTGTGTAGCAGATGAATGGTGAAGGTTGGAGGTGCTTTGGGAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATGGCCTCGCCACTCTGTaGCAGCTTTTTGAGTTTAGC +
Preference number: 5 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHGLATL*QLFEFS
Trigger: GCTAAACTCAAAAAGCTGCAACAGAGTGGCGAGGCC...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCAGGACTGTGCTGGATTaGCTTAAAGGTGGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSRTVLD*LKGGRG
Trigger: ACCCCTCCCACCTTTAAGCAAATCCAGCACAGTCCT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGTGTTCCTTTAGCAAAGACCCTATCTGGCCAAACAGAGAAGCCAGAGATCCATTCCAGTTGCTCTTATaGTTGGGGTCTTGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: ECSFSKDPIWPNREARDPFQLLL*LGSCKH
Trigger: GTGCTTGCAAGACCCCAACAATAAGAGCAACTGGAA...TGGATCTCTGGCTTCTCTGTTTGGCCAGATAGGGTCTTTGCTAAAGGAACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCATCACTGGCTGCCCTaGTTTCCAGCACTCCCTAAA +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSHHWLP*FPALPK
Trigger: TTTAGGGAGTGCTGGAAACAAGGGCAGCCAGTGATG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGTTTGCCATCTCGCCTaGTGTACTCGGGCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNVCHLA*CTRAVE
Trigger: TTCCACTGCCCGAGTACACAAGGCGAGATGGCAAAC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCATACTTGAGCCTGTTATaGCCAAGCAGGAATATGGCC +
Preference number: 5 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPYLSLL*PSRNMA
Trigger: GGCCATATTCCTGCTTGGCAATAACAGGCTCAAGTA...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAAATCCCTGCAACCCTaGCTAGTAACAAGTAGGACC +
Preference number: 5 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGKSLQP*LVTSRT
Trigger: GGTCCTACTTGTTACTAGCAAGGGTTGCAGGGATTT...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTCCAAAGACACCTGAGTaGCAACCGGCAGCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: DKQERKPADKLYSAHHFVPKTPE*QPAASV
Trigger: CACTGAGGCTGCCGGTTGCAACTCAGGTGTCTTTGG...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS GCA 90 bp GTACAGCCAAGCAGTATCTCCTTAAAAACTGTTGTAGGTACAGACTaGACAGGACACATACTGGGAGAGGCCTCAGAGCAAGATTTTGCT +
Preference number: 5 (lower is better)
Translates to: VQPSSISLKTVVGTD*TGHILGEASEQDFA
Trigger: AGCAAAATCTTGCTCTGAGGCCTCTCCCAGTATGTGTCCTGTGCAGTCTGTACCTACAACAGTTTTTAAGGAGATACTGCTTGGCTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATAGCCTGGGGAGTACTTaGCTGTCTTGGGTCCTTACT +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNSLGST*LSWVLT
Trigger: AGTAAGGACCCAAGACAGCAAAGTACTCCCCAGGCT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGGCCTCGCCACTCTGTaGCAGCTTTTTGAGTTTAGC +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNGLATL*QLFEFS
Trigger: GCTAAACTCAAAAAGCTGCAACAGAGTGGCGAGGCC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AAGAGATTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGAGGACTGTGCTGGATTaGCTTAAAGGTGGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: KRFRRKPELLLLTGVKIVRTVLD*LKGGRG
Trigger: ACCCCTCCCACCTTTAAGCAAATCCAGCACAGTCCT...CACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAATCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGAGGCCAAATTCAGTTaGCCATCTCGCCTTGTGTAC +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSEAKFS*PSRLVY
Trigger: GTACACAAGGCGAGATGGCAAACTGAATTTGGCCTC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATGAGGCCAAATTCAGTTaGCCATCTCGCCTTGTGTAC +
Preference number: 5 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHEAKFS*PSRLVY
Trigger: GTACACAAGGCGAGATGGCAAACTGAATTTGGCCTC...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGTCTCTCTCTTTCCACTaGATAGCTATCCCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: KISLLTARRTVKKTSAGRSLSFH*IAIPRF
Trigger: GAACCTGGGGATAGCTATCAAGTGGAAAGAGAGAGA...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS TCA 90 bp TCTTTCCTGAAGGATTCAGGTTTCCAAAGTTCAGAGTTCAATTTATaGTGCACTCCAGACACCATCACTGGCTGCCCTTGTTTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: SFLKDSGFQSSEFNL*CTPDTITGCPCFQH
Trigger: GTGCTGGAAACAAGGGCAGCCAGTGATGGTGTCTGGAGTGCATCATAAATTGAACTCTGAACTTTGGAAACCTGAATCCTTCAGGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATACCTTCAGATCCTTCTaGGTAACGTCGGTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNTFRSF*VTSVWE
Trigger: TTCCCACACCGACGTTACCAAGAAGGATCTGAAGGT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTTGTCCAACAGAGGTTaGTACGTTATTGCAGGCCAC +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSLSNRG*YVIAGH
Trigger: GTGGCCTGCAATAACGTACAAACCTCTGTTGGACAA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGATCCCAAACCAGCTTaGTCCAACAGAGGTTTGTAC +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSDPKPA*SNRGLY
Trigger: GTACAAACCTCTGTTGGACAAAGCTGGTTTGGGATC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCGAGAGCAACCCTGCTTaGCAGACATCTGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSESNPA*QTSGFV
Trigger: AACAAAACCAGATGTCTGCAAAGCAGGGTTGCTCTC...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCTGTTACAATCTGAGAGGACTTaGAGAGCAACCCTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: FRRKPELLLLTGVKIVLLQSERT*RATLLC
Trigger: GCAAAGCAGGGTTGCTCTCAAAGTCCTCTCAGATTG...TAACAGCACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTCACTTCTGGTGCATTaGAAACATCCGATGGGGAAG +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSSLLVH*KHPMGK
Trigger: CTTCCCCATCGGATGTTTCAAATGCACCAGAAGTGA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCTTAGGGCTATCACTATaGACACCTGCTTTCACTTCT +
Preference number: 5 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGLGLSL*TPAFTS
Trigger: AGAAGTGAAAGCAGGTGTCAATAGTGATAGCCCTAA...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCACACCCAGTGCAGGTaGAAGATGGTGGTGTCGCAC +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVHTQCR*KMVVSH
Trigger: GTGCGACACCACCATCTTCAACCTGCACTGGGTGTG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGTGTTCCTTTAGCAAAGACCCTATCTGGCCAAACAGAGAAGCCAGAGATCCAGTTTTAGGTCTTCCTTaGAGGCTGGCTTTGAAAAGA +
Preference number: 5 (lower is better)
Translates to: ECSFSKDPIWPNREARDPVLGLP*RLALKR
Trigger: TCTTTTCAAAGCCAGCCTCAAAGGAAGACCTAAAAC...TGGATCTCTGGCTTCTCTGTTTGGCCAGATAGGGTCTTTGCTAAAGGAACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATCGGAGGAAACCAGAATaGTTGTTGCTTACGGGTGTC +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNRRKPE*LLLTGV
Trigger: GACACCCGTAAGCAACAACAATTCTGGTTTCCTCCG...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCTTATTGTTGGGGTCTaGCAAGCACAGCAAGCGATT +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSLIVGV*QAQQAI
Trigger: AATCGCTTGCTGTGCTTGCAAGACCCCAACAATAAG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATCAGTTGCTCTTATTGTaGGGGTCTTGCAAGCACAGC +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNQLLLL*GSCKHS
Trigger: GCTGTGCTTGCAAGACCCCAACAATAAGAGCAACTG...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTTCCAGTTGCTCTTATaGTTGGGGTCTTGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSFQLLL*LGSCKH
Trigger: GTGCTTGCAAGACCCCAACAATAAGAGCAACTGGAA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGAGGCCAAATTCAGTTaGCCATCTCGCCTTGTGTAC +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNEAKFS*PSRLVY
Trigger: GTACACAAGGCGAGATGGCAAACTGAATTTGGCCTC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTACGCTTCCGCCGCTCATaGGCTGAAACACAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLRFRRS*AETQEL
Trigger: CAGCTCCTGTGTTTCAGCCAATGAGCGGCGGAAGCG...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409556.5
CDS GCA 90 bp GGAACTGAAGAGAGGCTGGATTATATGATCTCTCCAAAGAGCCTTTaGACTTACTCTCATGGAAGAGTCACAGCTCAATCACACAACCTT +
Preference number: 5 (lower is better)
Translates to: GTEERLDYMISPKSL*TYSHGRVTAQSHNL
Trigger: AAGGTTGTGTGATTGAGCTGTGACTCTTCCATGAGAGTAAGTGCAAAGGCTCTTTGGAGAGATCATATAATCCAGCCTCTCTTCAGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491383.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTTGTCCAACAGAGGTTaGTACGTTATTGCAGGCCAC +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNLSNRG*YVIAGH
Trigger: GTGGCCTGCAATAACGTACAAACCTCTGTTGGACAA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCTGTTACCTCAGAGCAAGATTTaGCTTGTTTGGAAACCAGGG +
Preference number: 5 (lower is better)
Translates to: FRRKPELLLLTGVKIVLLPQSKI*LVWKPG
Trigger: CCCTGGTTTCCAAACAAGCAAAATCTTGCTCTGAGG...TAACAGCACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTGCAGACATCTGGTTTaGTTCTCAGAGCTTCAGACT +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSCRHLV*FSELQT
Trigger: AGTCTGAAGCTCTGAGAACAAAACCAGATGTCTGCA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTCCGGAGGAAACCAGAATTGTTGTTGCTTACGGGTGTCAAAATTGTGCTGTTATCACTTCTGGTGCATTaGAAACATCCGATGGGGAAG +
Preference number: 5 (lower is better)
Translates to: FRRKPELLLLTGVKIVLLSLLVH*KHPMGK
Trigger: CTTCCCCATCGGATGTTTCAAATGCACCAGAAGTGA...TAACAGCACAATTTTGACACCCGTAAGCAACAACAATTCTGGTTTCCTCCGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCGCAACACACCATGTTaGTTGAATTGTAACCTCCTG +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSRNTPC*LNCNLL
Trigger: CAGGAGGTTACAATTCAACAAACATGGTGTGTTGCG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCAAGTGGTCTCCAATGTaGGCCAAGATGTACTTTGCT +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSKWSPM*AKMYFA
Trigger: AGCAAAGTACATCTTGGCCAACATTGGAGACCACTT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATATTTCTCGAACACCTTaGACAGCTCGCTTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNISRTP*TARFQA
Trigger: TGCTTGGAAGCGAGCTGTCAAAGGTGTTCGAGAAAT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTACACACCCAGTGCAGGTaGAAGATGGTGGTGTCGCAC +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLHTQCR*KMVVSH
Trigger: GTGCGACACCACCATCTTCAACCTGCACTGGGTGTG...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATAAGGACTTCTTCTTCTaGCTCACACTGTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNKDFFF*LTLSFG
Trigger: CCCAAAGGACAGTGTGAGCAAGAAGAAGAAGTCCTT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCAGCTGCAGATTAGACTaGTTTATCCTTGATCCAGTA +
Preference number: 5 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGSCRLD*FILDPV
Trigger: TACTGGATCAAGGATAAACAAGTCTAATCTGCAGCT...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS CCA 90 bp GCTGGATTATATGATCTCTCCAAAGAGCCTTTGCACTTACTCTCATaGAAGAGTCACAGCTCAATCACACAACCTTTGAAAAGACCACTC +
Preference number: 5 (lower is better)
Translates to: AGLYDLSKEPLHLLS*KSHSSITQPLKRPL
Trigger: GAGTGGTCTTTTCAAAGGTTGTGTGATTGAGCTGTGACTCTTCCATGAGAGTAAGTGCAAAGGCTCTTTGGAGAGATCATATAATCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491383.5
CDS-3UTR CAA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGAGAAAGAAATACTCTTaGTTGATCTCCCAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: KISLLTARRTVKKTSAGRRKKYS*LISQKA
Trigger: CGCTTTCTGGGAGATCAACAAAGAGTATTTCTTTCT...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp AAGATCTCATTACTTACAGCAAGACGGACTGTGAAGAAGACAAGCGCTGGAAGGTTACAGCTCCAATTCTaGCAGAATTACCACATGTCA +
Preference number: 5 (lower is better)
Translates to: KISLLTARRTVKKTSAGRLQLQF*QNYHMS
Trigger: TGACATGTGGTAATTCTGCAAGAATTGGAGCTGTAA...CCTTCCAGCGCTTGTCTTCTTCACAGTCCGTCTTGCTGTAAGTAATGAGATCTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAGCCTGGGGAGTACTTaGCTGTCTTGGGTCCTTACT +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVSLGST*LSWVLT
Trigger: AGTAAGGACCCAAGACAGCAAAGTACTCCCCAGGCT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCATTGTTTATGACATCCTaGAGGAATTTTTGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPLFMTS*RNFCSK
Trigger: CTTGGAGCAAAAATTCCTCAAGGATGTCATAAACAA...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp GTGTTGGCAGTTCATAAATGTCAGGCCTTCTTCAACTTAAGTGCCCCCATTGGCTCAGAGCTTCAGACTTaGTATTTAGACAGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: VLAVHKCQAFFNLSAPIGSELQT*YLDRKK
Trigger: TTTCTTCCTGTCTAAATACAAAGTCTGAAGCTCTGA...GCCAATGGGGGCACTTAAGTTGAAGAAGGCCTGACATTTATGAACTGCCAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGAGTACAGCTGCCTTTaGGCTCAGTCAGAATTTTCA +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNEYSCL*AQSEFS
Trigger: TGAAAATTCTGACTGAGCCAAAAGGCAGCTGTACTC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTTAGGGCTATCACTATaGACACCTGCTTTCACTTCT +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSLGLSL*TPAFTS
Trigger: AGAAGTGAAAGCAGGTGTCAATAGTGATAGCCCTAA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCAGCATTCTGGATTTTATaGTTGCTTCTTGAACAACAG +
Preference number: 5 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPAFWIL*LLLEQQ
Trigger: CTGTTGTTCAAGAAGCAACAATAAAATCCAGAATGC...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTGTTGCTCCTTATCCTaGCGGAGACTGTCCAAGCGA +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVCCSLS*RRLSKR
Trigger: TCGCTTGGACAGTCTCCGCAAGGATAAGGAGCAACA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATCGCAACACACCATGTTaGTTGAATTGTAACCTCCTG +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNRNTPC*LNCNLL
Trigger: CAGGAGGTTACAATTCAACAAACATGGTGTGTTGCG...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp CAGTGGACAAAACCAAACTTAGCAACTCACTCAGAACATGGTCACTCAGGGCCAAAGCCAATTGCTTCATaGTCATACTTGTTTGGTGTT +
Preference number: 5 (lower is better)
Translates to: QWTKPNLATHSEHGHSGPKPIAS*SYLFGV
Trigger: AACACCAAACAAGTATGACAATGAAGCAATTGGCTT...TGGCCCTGAGTGACCATGTTCTGAGTGAGTTGCTAAGTTTGGTTTTGTCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCATCCCCACAACGTTTTaGGTTAAAGGTAACCACAAG +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSIPTTF*VKGNHK
Trigger: CTTGTGGTTACCTTTAACCAAAAACGTTGTGGGGAT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATAAGTGGTCTCCAATGTaGGCCAAGATGTACTTTGCT +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNKWSPM*AKMYFA
Trigger: AGCAAAGTACATCTTGGCCAACATTGGAGACCACTT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GACAAGCAAGAAAGAAAGCCTGCCGATAAACTGTATTCAGCCCATCATTTTGTTATTTCTCGAACACCTTaGACAGCTCGCTTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: DKQERKPADKLYSAHHFVISRTP*TARFQA
Trigger: TGCTTGGAAGCGAGCTGTCAAAGGTGTTCGAGAAAT...AACAAAATGATGGGCTGAATACAGTTTATCGGCAGGCTTTCTTTCTTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGTAAGCAGCACCCTGTaGGCAATTCTTTCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNVSSTL*AILSLH
Trigger: ATGAAGAGAAAGAATTGCCAACAGGGTGCTGCTTAC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAGGACTGTGCTGGATTaGCTTAAAGGTGGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVRTVLD*LKGGRG
Trigger: ACCCCTCCCACCTTTAAGCAAATCCAGCACAGTCCT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCTAAACACATTCCAGTaGCTCTTATTGTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSLNTFQ*LLLLGS
Trigger: AGACCCCAACAATAAGAGCAACTGGAATGTGTTTAG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGTTTGCCATCTCGCCTaGTGTACTCGGGCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLVCHLA*CTRAVE
Trigger: TTCCACTGCCCGAGTACACAAGGCGAGATGGCAAAC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTCCCCATTTCGCTCTTACAGAATGAACAATGTCTCCAACATCATAGAGTGCTTAAGGACTTCTTCTTCTaGCTCACACTGTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: FPISLLQNEQCLQHHRVLKDFFF*LTLSFG
Trigger: CCCAAAGGACAGTGTGAGCAAGAAGAAGAAGTCCTT...AAGCACTCTATGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAAATGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGTCAGAATCTCCATCTaGGATGGTCTTAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNVRISI*DGLKDF
Trigger: GAAGTCCTTAAGACCATCCAAGATGGAGATTCTGAC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATAATTCTCCCAAATTCTaGTCCAAGAGCAGAGTGTTC +
Preference number: 5 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHNSPKF*SKSRVF
Trigger: GAACACTCTGCTCTTGGACAAGAATTTGGGAGAATT...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS TCA 90 bp ACCACATGTCACAAGGTTATCGTGTACAACTTCAACATGAATCAGTaGCGGATCAACAATTTTCAGTGCTGGAATCTCCTCACAGTTGAC +
Preference number: 5 (lower is better)
Translates to: TTCHKVIVYNFNMNQ*RINNFQCWNLLTVD
Trigger: GTCAACTGTGAGGAGATTCCAGCACTGAAAATTGTTGATCCGTCACTGATTCATGTTGAAGTTGTACACGATAACCTTGTGACATGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS TCA 90 bp TGTGGCTCAATAGTTGACATAGCTTCCTTTTCAGAAATCACCATTTaGCAGAAGTGGTCTCCAATGTTGGCCAAGATGTACTTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: CGSIVDIASFSEITI*QKWSPMLAKMYFAV
Trigger: CACAGCAAAGTACATCTTGGCCAACATTGGAGACCACTTCTGTCAAATGGTGATTTCTGAAAAGGAAGCTATGTCAACTATTGAGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS TCA 90 bp CACATGCTTCAAGAAACCCGCCAAACACAAATCAACAAAAACACTTaGTTTAACTGTGTAGAGGGGCTGGAGGAGAATCAAATCGGTTCT +
Preference number: 5 (lower is better)
Translates to: HMLQETRQTQINKNT*FNCVEGLEENQIGS
Trigger: AGAACCGATTTGATTCTCCTCCAGCCCCTCTACACAGTTAAATCAAGTGTTTTTGTTGATTTGTGTTTGGCGGGTTTCTTGAAGCATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp GGCTTTGAAAAGAGTTTGAATTGCCTGTTTGAACAAGGGCAGTTTGCCTTTATTGATCCCAAACCAGCTTaGTCCAACAGAGGTTTGTAC +
Preference number: 5 (lower is better)
Translates to: GFEKSLNCLFEQGQFAFIDPKPA*SNRGLY
Trigger: GTACAAACCTCTGTTGGACAAAGCTGGTTTGGGATC...AATAAAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTCAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCAAGAAATACTCTTTGTaGATCTCCCAGAAAGCGAAC +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSKKYSL*ISQKAN
Trigger: GTTCGCTTTCTGGGAGATCAACAAAGAGTATTTCTT...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTTACAGCTCCAATTCTaGCAGAATTACCACATGTCA +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSLQLQF*QNYHMS
Trigger: TGACATGTGGTAATTCTGCAAGAATTGGAGCTGTAA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAGCCTGGGGAGTACTTaGCTGTCTTGGGTCCTTACT +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPSLGST*LSWVLT
Trigger: AGTAAGGACCCAAGACAGCAAAGTACTCCCCAGGCT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCAATCTGAGAGGACTTaGAGAGCAACCCTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVQSERT*RATLLC
Trigger: GCAAAGCAGGGTTGCTCTCAAAGTCCTCTCAGATTG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GGCTTTGAAAAGAGTTTGAATTGCCTGTTTGAACAAGGGCAGTTTGCCTTTATTAAGGCCAGTCAATGCTaGTGGAACAGACTCCAATCT +
Preference number: 5 (lower is better)
Translates to: GFEKSLNCLFEQGQFAFIKASQC*WNRLQS
Trigger: AGATTGGAGTCTGTTCCACAAGCATTGACTGGCCTT...AATAAAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTCAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTTAGGGCTATCACTATaGACACCTGCTTTCACTTCT +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNLGLSL*TPAFTS
Trigger: AGAAGTGAAAGCAGGTGTCAATAGTGATAGCCCTAA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGGCCTCGCCACTCTGTaGCAGCTTTTTGAGTTTAGC +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPGLATL*QLFEFS
Trigger: GCTAAACTCAAAAAGCTGCAACAGAGTGGCGAGGCC...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATGTTGCTCCTTATCCTaGCGGAGACTGTCCAAGCGA +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLCCSLS*RRLSKR
Trigger: TCGCTTGGACAGTCTCCGCAAGGATAAGGAGCAACA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGTTGCAACCGGCAGCCTCAGTGCCAAACAATTTTAAAACTGAACACGACTCATGTAACCACAAGCCAATaGCTTCATTGTCATACTTGT +
Preference number: 5 (lower is better)
Translates to: SCNRQPQCQTILKLNTTHVTTSQ*LHCHTC
Trigger: ACAAGTATGACAATGAAGCAATTGGCTTGTGGTTAC...ATGAGTCGTGTTCAGTTTTAAAATTGTTTGGCACTGAGGCTGCCGGTTGCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATATCCCCACAACGTTTTaGGTTAAAGGTAACCACAAG +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNIPTTF*VKGNHK
Trigger: CTTGTGGTTACCTTTAACCAAAAACGTTGTGGGGAT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTTCAGAAATCACCATTaGACAGAAGTGGTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSFRNHH*TEVVSN
Trigger: ATTGGAGACCACTTCTGTCAAATGGTGATTTCTGAA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGTTTTAGGTCTTCCTTaGAGGCTGGCTTTGAAAAGA +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNVLGLP*RLALKR
Trigger: TCTTTTCAAAGCCAGCCTCAAAGGAAGACCTAAAAC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTTTTCCTTGTTTTCCTaGTTGACATTCCCGCTGGTT +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNFSLFS*LTFPLV
Trigger: AACCAGCGGGAATGTCAACAAGGAAAACAAGGAAAA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAGGACTGTGCTGGATTaGCTTAAAGGTGGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPRTVLD*LKGGRG
Trigger: ACCCCTCCCACCTTTAAGCAAATCCAGCACAGTCCT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATAGGAAACCAGAATTGTaGTTGCTTACGGGTGTCAAA +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNRKPEL*LLTGVK
Trigger: TTTGACACCCGTAAGCAACAACAATTCTGGTTTCCT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GGCTTTGAAAAGAGTTTGAATTGCCTGTTTGAACAAGGGCAGTTTGCCTTTATTCTTATTGTTGGGGTCTaGCAAGCACAGCAAGCGATT +
Preference number: 5 (lower is better)
Translates to: GFEKSLNCLFEQGQFAFILIVGV*QAQQAI
Trigger: AATCGCTTGCTGTGCTTGCAAGACCCCAACAATAAG...AATAAAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTCAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCAGTTGCTCTTATTGTaGGGGTCTTGCAAGCACAGC +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVQLLLL*GSCKHS
Trigger: GCTGTGCTTGCAAGACCCCAACAATAAGAGCAACTG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCCTGTGATGATTTCATaGGTCCTACAATTAACTAGG +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSPVMIS*VLQLTR
Trigger: CCTAGTTAATTGTAGGACCAATGAAATCATCACAGG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCACTGTCACTTCCTCCATaGCTCTTCTGGACCCTAAGG +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPLSLPP*LFWTLR
Trigger: CCTTAGGGTCCAGAAGAGCAATGGAGGAAGTGACAG...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGACTCCAGCGCTGACTaGGTTCAAGAGCTCTCACAA +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLDSSAD*VQELSQ
Trigger: TTGTGAGAGCTCTTGAACCAAGTCAGCGCTGGAGTC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409556.5
CDS TCA 90 bp GCAGAATTACCACATGTCACAAGGTTATCGTGTACAACTTCAACATaGATCAGTGACGGATCAACAATTTTCAGTGCTGGAATCTCCTCA +
Preference number: 5 (lower is better)
Translates to: AELPHVTRLSCTTST*ISDGSTIFSAGISS
Trigger: TGAGGAGATTCCAGCACTGAAAATTGTTGATCCGTCACTGATTCATGTTGAAGTTGTACACGATAACCTTGTGACATGTGGTAATTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAACCTTCAGATCCTTCTaGGTAACGTCGGTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLTFRSF*VTSVWE
Trigger: TTCCCACACCGACGTTACCAAGAAGGATCTGAAGGT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTTGTCCAACAGAGGTTaGTACGTTATTGCAGGCCAC +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVLSNRG*YVIAGH
Trigger: GTGGCCTGCAATAACGTACAAACCTCTGTTGGACAA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGATCCCAAACCAGCTTaGTCCAACAGAGGTTTGTAC +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVDPKPA*SNRGLY
Trigger: GTACAAACCTCTGTTGGACAAAGCTGGTTTGGGATC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTTATTCTCAGAAGACTaGCGTTTTACAGCTCCAATT +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSLFSED*RFTAPI
Trigger: AATTGGAGCTGTAAAACGCAAGTCTTCTGAGAATAA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCTCAGAGCTTCAGACTTaGTATTTAGACAGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSSELQT*YLDRKK
Trigger: TTTCTTCCTGTCTAAATACAAAGTCTGAAGCTCTGA...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCACAATCTGAGAGGACTTaGAGAGCAACCCTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPQSERT*RATLLC
Trigger: GCAAAGCAGGGTTGCTCTCAAAGTCCTCTCAGATTG...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTGCAGTTCAGGAGGATaGGCAATTTCCAATTCTGCC +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVCSSGG*AISNSA
Trigger: GGCAGAATTGGAAATTGCCAATCCTCCTGAACTGCA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTCACTTCTGGTGCATTaGAAACATCCGATGGGGAAG +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVSLLVH*KHPMGK
Trigger: CTTCCCCATCGGATGTTTCAAATGCACCAGAAGTGA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATAACACACCATGTTTGTaGAATTGTAACCTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNNTPCL*NCNLLK
Trigger: CTTCAGGAGGTTACAATTCAACAAACATGGTGTGTT...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp ATGCCAGTCCTATGCCATACAATAAGAACTGCAACATTAGCTGTCACTTCCTCCCATTGTCATACTTGTTaGGTGTTAAGAAGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: MPVLCHTIRTATLAVTSSHCHTC*VLRSLL
Trigger: TAGAAGGCTTCTTAACACCAAACAAGTATGACAATG...GGAGGAAGTGACAGCTAATGTTGCAGTTCTTATTGTATGGCATAGGACTGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGTAACCACAAGCCAATaGCTTCATTGTCATACTTGT +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNVTTSQ*LHCHTC
Trigger: ACAAGTATGACAATGAAGCAATTGGCTTGTGGTTAC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCATTTCTCGAACACCTTaGACAGCTCGCTTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVISRTP*TARFQA
Trigger: TGCTTGGAAGCGAGCTGTCAAAGGTGTTCGAGAAAT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCACGGAGGAAACCAGAATaGTTGTTGCTTACGGGTGTC +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPRRKPE*LLLTGV
Trigger: GACACCCGTAAGCAACAACAATTCTGGTTTCCTCCG...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTTATTGTTGGGGTCTaGCAAGCACAGCAAGCGATT +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVLIVGV*QAQQAI
Trigger: AATCGCTTGCTGTGCTTGCAAGACCCCAACAATAAG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCACAGTTGCTCTTATTGTaGGGGTCTTGCAAGCACAGC +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPQLLLL*GSCKHS
Trigger: GCTGTGCTTGCAAGACCCCAACAATAAGAGCAACTG...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTACAGTTGCTCTTATTGTaGGGGTCTTGCAAGCACAGC +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLQLLLL*GSCKHS
Trigger: GCTGTGCTTGCAAGACCCCAACAATAAGAGCAACTG...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATCCTGTGATGATTTCATaGGTCCTACAATTAACTAGG +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNPVMIS*VLQLTR
Trigger: CCTAGTTAATTGTAGGACCAATGAAATCATCACAGG...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGAGGCCAAATTCAGTTaGCCATCTCGCCTTGTGTAC +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPEAKFS*PSRLVY
Trigger: GTACACAAGGCGAGATGGCAAACTGAATTTGGCCTC...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GGCTTTGAAAAGAGTTTGAATTGCCTGTTTGAACAAGGGCAGTTTGCCTTTATTGTCAGAATCTCCATCTaGGATGGTCTTAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: GFEKSLNCLFEQGQFAFIVRISI*DGLKDF
Trigger: GAAGTCCTTAAGACCATCCAAGATGGAGATTCTGAC...AATAAAGGCAAACTGCCCTTGTTCAAACAGGCAATTCAAACTCTTTTCAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTCTTCTCCGTGTCCTTaGCAGCATATATGTGCCACA +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVSSPCP*QHICAT
Trigger: TGTGGCACATATATGCTGCAAAGGACACGGAGAAGA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS TCA 90 bp TCCTGTATAGGCTTCAAAAGGTCTTTAGAAAGAAATACTCTTTGTTaGTCTCCCAGAAAGCGAACAGAAGTTATGGATCCCAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: SCIGFKRSLERNTLC*SPRKRTEVMDPKPA
Trigger: AGCTGGTTTGGGATCCATAACTTCTGTTCGCTTTCTGGGAGATCAACAAAGAGTATTTCTTTCTAAAGACCTTTTGAAGCCTATACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000427678.1
ENST00000441719.5
ENST00000463013.1
CDS CCA 90 bp CCAAGATGTACTTTGCTGTGTCCAAATCAATCCCCACAACGTTTTTaGTTAAAGGTAACCACAAGCCAATTGCTTCATTGTCATACTTGT +
Preference number: 5 (lower is better)
Translates to: PRCTLLCPNQSPQRF*LKVTTSQLLHCHTC
Trigger: ACAAGTATGACAATGAAGCAATTGGCTTGTGGTTACCTTTAACCAAAAACGTTGTGGGGATTGATTTGGACACAGCAAAGTACATCTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGAGGTTTGTACGTTATaGCAGGCCACTGTACAATTC +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVEVCTL*QATVQF
Trigger: GAATTGTACAGTGGCCTGCAATAACGTACAAACCTC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATTGTCCAACAGAGGTTaGTACGTTATTGCAGGCCAC +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPLSNRG*YVIAGH
Trigger: GTGGCCTGCAATAACGTACAAACCTCTGTTGGACAA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCACCTCAGAGCAAGATTTaGCTTGTTTGGAAACCAGGG +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPPQSKI*LVWKPG
Trigger: CCCTGGTTTCCAAACAAGCAAAATCTTGCTCTGAGG...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTACCTCAGAGCAAGATTTaGCTTGTTTGGAAACCAGGG +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLPQSKI*LVWKPG
Trigger: CCCTGGTTTCCAAACAAGCAAAATCTTGCTCTGAGG...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATTTGTTTATGACATCCTaGAGGAATTTTTGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNLFMTS*RNFCSK
Trigger: CTTGGAGCAAAAATTCCTCAAGGATGTCATAAACAA...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTGCAGACATCTGGTTTaGTTCTCAGAGCTTCAGACT +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVCRHLV*FSELQT
Trigger: AGTCTGAAGCTCTGAGAACAAAACCAGATGTCTGCA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGAGAGCAACCCTGCTTaGCAGACATCTGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLESNPA*QTSGFV
Trigger: AACAAAACCAGATGTCTGCAAAGCAGGGTTGCTCTC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGAGTACAGCTGCCTTTaGGCTCAGTCAGAATTTTCA +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVEYSCL*AQSEFS
Trigger: TGAAAATTCTGACTGAGCCAAAAGGCAGCTGTACTC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAAGGCCAGTCAATGCTaGTGGAACAGACTCCAATCT +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLKASQC*WNRLQS
Trigger: AGATTGGAGTCTGTTCCACAAGCATTGACTGGCCTT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAAGGCCAGTCAATGCTaGTGGAACAGACTCCAATCT +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPKASQC*WNRLQS
Trigger: AGATTGGAGTCTGTTCCACAAGCATTGACTGGCCTT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATGCAGTTCAGGAGGATaGGCAATTTCCAATTCTGCC +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLCSSGG*AISNSA
Trigger: GGCAGAATTGGAAATTGCCAATCCTCCTGAACTGCA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATCACTTCTGGTGCATTaGAAACATCCGATGGGGAAG +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPSLLVH*KHPMGK
Trigger: CTTCCCCATCGGATGTTTCAAATGCACCAGAAGTGA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATGCATTCTGGATTTTATaGTTGCTTCTTGAACAACAG +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNAFWIL*LLLEQQ
Trigger: CTGTTGTTCAAGAAGCAACAATAAAATCCAGAATGC...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTCCCCATTTCGCTCTTACAGAATGAACAATGTCTCCAACATCATAGAGTGCTTAACACACCATGTTTGTaGAATTGTAACCTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: FPISLLQNEQCLQHHRVLNTPCL*NCNLLK
Trigger: CTTCAGGAGGTTACAATTCAACAAACATGGTGTGTT...AAGCACTCTATGATGTTGGAGACATTGTTCATTCTGTAAGAGCGAAATGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp GAGGGGACTCAGACACAAAACACAACCCAAATAAACTGTGCAGTGATTCCTAATCATTGTCATACTTGTTaGGTGTTAAGAAGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: EGTQTQNTTQINCAVIPNHCHTC*VLRSLL
Trigger: TAGAAGGCTTCTTAACACCAAACAAGTATGACAATG...ATTAGGAATCACTGCACAGTTTATTTGGGTTGTGTTTTGTGTCTGAGTCCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTACTTATTGTTGGGGTCTaGCAAGCACAGCAAGCGATT +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLLIVGV*QAQQAI
Trigger: AATCGCTTGCTGTGCTTGCAAGACCCCAACAATAAG...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATTCCAGTTGCTCTTATaGTTGGGGTCTTGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLFQLLL*LGSCKH
Trigger: GTGCTTGCAAGACCCCAACAATAAGAGCAACTGGAA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATTCCAGTTGCTCTTATaGTTGGGGTCTTGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPFQLLL*LGSCKH
Trigger: GTGCTTGCAAGACCCCAACAATAAGAGCAACTGGAA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAAGGACTTCTTCTTCTaGCTCACACTGTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPKDFFF*LTLSFG
Trigger: CCCAAAGGACAGTGTGAGCAAGAAGAAGAAGTCCTT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGTCAGAATCTCCATCTaGGATGGTCTTAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVVRISI*DGLKDF
Trigger: GAAGTCCTTAAGACCATCCAAGATGGAGATTCTGAC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATCTTCTCCGTGTCCTTaGCAGCATATATGTGCCACA +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPSSPCP*QHICAT
Trigger: TGTGGCACATATATGCTGCAAAGGACACGGAGAAGA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATCTTCTCCGTGTCCTTaGCAGCATATATGTGCCACA +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLSSPCP*QHICAT
Trigger: TGTGGCACATATATGCTGCAAAGGACACGGAGAAGA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGAGGTTTGTACGTTATaGCAGGCCACTGTACAATTC +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPEVCTL*QATVQF
Trigger: GAATTGTACAGTGGCCTGCAATAACGTACAAACCTC...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATGCAGACATCTGGTTTaGTTCTCAGAGCTTCAGACT +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPCRHLV*FSELQT
Trigger: AGTCTGAAGCTCTGAGAACAAAACCAGATGTCTGCA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGAGTACAGCTGCCTTTaGGCTCAGTCAGAATTTTCA +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLEYSCL*AQSEFS
Trigger: TGAAAATTCTGACTGAGCCAAAAGGCAGCTGTACTC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTACGCAACACACCATGTTaGTTGAATTGTAACCTCCTG +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLRNTPC*LNCNLL
Trigger: CAGGAGGTTACAATTCAACAAACATGGTGTGTTGCG...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCACGCAACACACCATGTTaGTTGAATTGTAACCTCCTG +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPRNTPC*LNCNLL
Trigger: CAGGAGGTTACAATTCAACAAACATGGTGTGTTGCG...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAAGTGGTCTCCAATGTaGGCCAAGATGTACTTTGCT +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLKWSPM*AKMYFA
Trigger: AGCAAAGTACATCTTGGCCAACATTGGAGACCACTT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTAAGCAGCACCCTGTaGGCAATTCTTTCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPVSSTL*AILSLH
Trigger: ATGAAGAGAAAGAATTGCCAACAGGGTGCTGCTTAC...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGTTTTAGGTCTTCCTTaGAGGCTGGCTTTGAAAAGA +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVVLGLP*RLALKR
Trigger: TCTTTTCAAAGCCAGCCTCAAAGGAAGACCTAAAAC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTTTTCCTTGTTTTCCTaGTTGACATTCCCGCTGGTT +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVFSLFS*LTFPLV
Trigger: AACCAGCGGGAATGTCAACAAGGAAAACAAGGAAAA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAGGAAACCAGAATTGTaGTTGCTTACGGGTGTCAAA +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVRKPEL*LLTGVK
Trigger: TTTGACACCCGTAAGCAACAACAATTCTGGTTTCCT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAACACATTCCAGTaGCTCTTATTGTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVLNTFQ*LLLLGS
Trigger: AGACCCCAACAATAAGAGCAACTGGAATGTGTTTAG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGTCAGAATCTCCATCTaGGATGGTCTTAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLVRISI*DGLKDF
Trigger: GAAGTCCTTAAGACCATCCAAGATGGAGATTCTGAC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATCGGTTCTCACCCTGTaGGCAATTCTTTCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLSVLTL*AILSLH
Trigger: ATGAAGAGAAAGAATTGCCAACAGGGTGAGAACCGA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAGAAAGAAATACTCTTaGTTGATCTCCCAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVRKKYS*LISQKA
Trigger: CGCTTTCTGGGAGATCAACAAAGAGTATTTCTTTCT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTTACAGCTCCAATTCTaGCAGAATTACCACATGTCA +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVLQLQF*QNYHMS
Trigger: TGACATGTGGTAATTCTGCAAGAATTGGAGCTGTAA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATTAGGGCTATCACTATaGACACCTGCTTTCACTTCT +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLLGLSL*TPAFTS
Trigger: AGAAGTGAAAGCAGGTGTCAATAGTGATAGCCCTAA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAACACACCATGTTTGTaGAATTGTAACCTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVNTPCL*NCNLLK
Trigger: CTTCAGGAGGTTACAATTCAACAAACATGGTGTGTT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGTAACCACAAGCCAATaGCTTCATTGTCATACTTGT +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVVTTSQ*LHCHTC
Trigger: ACAAGTATGACAATGAAGCAATTGGCTTGTGGTTAC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAATCCCCACAACGTTTTaGGTTAAAGGTAACCACAAG +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPIPTTF*VKGNHK
Trigger: CTTGTGGTTACCTTTAACCAAAAACGTTGTGGGGAT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTTCAGAAATCACCATTaGACAGAAGTGGTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVFRNHH*TEVVSN
Trigger: ATTGGAGACCACTTCTGTCAAATGGTGATTTCTGAA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGTTTTAGGTCTTCCTTaGAGGCTGGCTTTGAAAAGA +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLVLGLP*RLALKR
Trigger: TCTTTTCAAAGCCAGCCTCAAAGGAAGACCTAAAAC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATTTTCCTTGTTTTCCTaGTTGACATTCCCGCTGGTT +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPFSLFS*LTFPLV
Trigger: AACCAGCGGGAATGTCAACAAGGAAAACAAGGAAAA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATTTTCCTTGTTTTCCTaGTTGACATTCCCGCTGGTT +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLFSLFS*LTFPLV
Trigger: AACCAGCGGGAATGTCAACAAGGAAAACAAGGAAAA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAGGAAACCAGAATTGTaGTTGCTTACGGGTGTCAAA +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPRKPEL*LLTGVK
Trigger: TTTGACACCCGTAAGCAACAACAATTCTGGTTTCCT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAGGAAACCAGAATTGTaGTTGCTTACGGGTGTCAAA +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLRKPEL*LLTGVK
Trigger: TTTGACACCCGTAAGCAACAACAATTCTGGTTTCCT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTACTAAACACATTCCAGTaGCTCTTATTGTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLLNTFQ*LLLLGS
Trigger: AGACCCCAACAATAAGAGCAACTGGAATGTGTTTAG...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCCTGTGATGATTTCATaGGTCCTACAATTAACTAGG +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVPVMIS*VLQLTR
Trigger: CCTAGTTAATTGTAGGACCAATGAAATCATCACAGG...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATTGTTAAAGACATACTaGGGGCCAGCTAACAGGTTA +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPLLKTY*GPANRL
Trigger: TAACCTGTTAGCTGGCCCCAAGTATGTCTTTAACAA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS TCA 90 bp ATCTTACAAAGAGTTATTGTTGTCTTTACCTCCTCACAGTTGACTTaGAGAGTTTTTGATGCTGGGTTTCCATTTATAACGGTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: ILQRVIVVFTSSQLT*RVFDAGFPFITVAE
Trigger: TTCAGCAACCGTTATAAATGGAAACCCAGCATCAAAAACTCTTCAAGTCAACTGTGAGGAGGTAAAGACAACAATAACTCTTTGTAAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463013.1
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAAGAAATACTCTTTGTaGATCTCCCAGAAAGCGAAC +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLKKYSL*ISQKAN
Trigger: GTTCGCTTTCTGGGAGATCAACAAAGAGTATTTCTT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAAGAAATACTCTTTGTaGATCTCCCAGAAAGCGAAC +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPKKYSL*ISQKAN
Trigger: GTTCGCTTTCTGGGAGATCAACAAAGAGTATTTCTT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAAGAAAGAAATACTCTTaGTTGATCTCCCAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLRKKYS*LISQKA
Trigger: CGCTTTCTGGGAGATCAACAAAGAGTATTTCTTTCT...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATTACAGCTCCAATTCTaGCAGAATTACCACATGTCA +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPLQLQF*QNYHMS
Trigger: TGACATGTGGTAATTCTGCAAGAATTGGAGCTGTAA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTTATTCTCAGAAGACTaGCGTTTTACAGCTCCAATT +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVLFSED*RFTAPI
Trigger: AATTGGAGCTGTAAAACGCAAGTCTTCTGAGAATAA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCTTGTTTATGACATCCTaGAGGAATTTTTGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVLFMTS*RNFCSK
Trigger: CTTGGAGCAAAAATTCCTCAAGGATGTCATAAACAA...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCGCATTCTGGATTTTATaGTTGCTTCTTGAACAACAG +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVAFWIL*LLLEQQ
Trigger: CTGTTGTTCAAGAAGCAACAATAAAATCCAGAATGC...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCAAGCCAATTGCTTCATaGTCATACTTGTTTGGTGTT +
Preference number: 5 (lower is better)
Translates to: WLTPRNCTVVDFCYIMPVKPIAS*SYLFGV
Trigger: AACACCAAACAAGTATGACAATGAAGCAATTGGCTT...GACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTAGTAACCACAAGCCAATaGCTTCATTGTCATACTTGT +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLVTTSQ*LHCHTC
Trigger: ACAAGTATGACAATGAAGCAATTGGCTTGTGGTTAC...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCATTCAGAAATCACCATTaGACAGAAGTGGTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPFRNHH*TEVVSN
Trigger: ATTGGAGACCACTTCTGTCAAATGGTGATTTCTGAA...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp TTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAGTCCTATCAGAGCTTCAGACTTaGTATTTAGACAGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: LTPRNCTVVDFCYIMPVLSELQT*YLDRKK
Trigger: TTTCTTCCTGTCTAAATACAAAGTCTGAAGCTCTGA...TAGGACTGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCACATTGTCATACTTGTTaGGTGTTAAGAAGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPHCHTC*VLRSLL
Trigger: TAGAAGGCTTCTTAACACCAAACAAGTATGACAATG...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS-3UTR CAA 90 bp AGATGGTTAACCCCAAGAAATTGTACAGTAGTTGATTTCTGCTATATAATGCCAAAGCCAATTGCTTCATaGTCATACTTGTTTGGTGTT +
Preference number: 5 (lower is better)
Translates to: RWLTPRNCTVVDFCYIMPKPIAS*SYLFGV
Trigger: AACACCAAACAAGTATGACAATGAAGCAATTGGCTT...TGGCATTATATAGCAGAAATCAACTACTGTACAATTTCTTGGGGTTAACCATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS GCA 72 bp GGAGGCTCGTGCGCAGGCGCCTCGCCGAGCTTAGGCTaGTGGGCGAAATGGCTGCGGGAGGCGCAGGCGCAC +
Preference number: 6 (lower is better)
Translates to: GGSCAGASPSLG*WAKWLREAQAH
Trigger: GTGCGCCTGCGCCTCCCGCAGCCATTTCGCCCAGCAGCCTAAGCTCGGCGAGGCGCCTGCGCACGAGCCTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452034.5
CDS CCA 72 bp GGCTCGTGCGCAGGCGCCTCGCCGAGCTTAGGCTGCTaGGCGAAATGGCTGCGGGAGGCGCAGGCGCACGTG +
Preference number: 6 (lower is better)
Translates to: GSCAGASPSLGC*AKWLREAQAHV
Trigger: CACGTGCGCCTGCGCCTCCCGCAGCCATTTCGCCCAGCAGCCTAAGCTCGGCGAGGCGCCTGCGCACGAGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452034.5
CDS CCA 72 bp GGCCACTCGGCGACGCGCTCCACGTCCCAGCTGTCGTaGCTGCCATCGCTGCCGTCGGCTGCGGACAGACTG +
Preference number: 6 (lower is better)
Translates to: GHSATRSTSQLS*LPSLPSAADRL
Trigger: CAGTCTGTCCGCAGCCGACGGCAGCGATGGCAGCCACGACAGCTGGGACGTGGAGCGCGTCGCCGAGTGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000427678.1
ENST00000441719.5
ENST00000452034.5
CDS CCA 72 bp GCAGGCGCCTCGCCGAGCTTAGGCTGCTGGGCGAAATaGCTGCGGGAGGCGCAGGCGCACGTGGTACTGATC +
Preference number: 6 (lower is better)
Translates to: AGASPSLGCWAK*LREAQAHVVLI
Trigger: GATCAGTACCACGTGCGCCTGCGCCTCCCGCAGCCATTTCGCCCAGCAGCCTAAGCTCGGCGAGGCGCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452034.5
CDS CAA 90 bp GCGGCAGCCGCCGTTTCCAGCCGCCTAGCCGACTCCAGCGCTGACTaGGTTCAAGAGCTCTCACAAGACACGCACAGCCTCCCGGACCCG +
Preference number: 6 (lower is better)
Translates to: AAAAVSSRLADSSAD*VQELSQDTHSLPDP
Trigger: CGGGTCCGGGAGGCTGTGCGTGTCTTGTGAGAGCTCTTGAACCAAGTCAGCGCTGGAGTCGGCTAGGCGGCTGGAAACGGCGGCTGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409556.5
CDS CCA 72 bp AGGCGTACTCAGCTAGAGGGAGGAGCGATAGTGCTCTaGAGGCTCGTGCGCAGGCGCCTCGCCGAGCTTAGG +
Preference number: 6 (lower is better)
Translates to: RRTQLEGGAIVL*RLVRRRLAELR
Trigger: CCTAAGCTCGGCGAGGCGCCTGCGCACGAGCCTCCAGAGCACTATCGCTCCTCCCTCTAGCTGAGTACGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452034.5
CDS GCA 72 bp GTCCCAGCTGTCGTGGCTGCCATCGCTGCCGTCGGCTaGGGACAGACTGAGAAACCTCCTCCCCACCAATAC +
Preference number: 6 (lower is better)
Translates to: VPAVVAAIAAVG*GQTEKPPPHQY
Trigger: GTATTGGTGGGGAGGAGGTTTCTCAGTCTGTCCGCAGCCGACGGCAGCGATGGCAGCCACGACAGCTGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000427678.1
ENST00000441719.5
ENST00000452034.5
CDS TCA 72 bp AGCCGCCGTTTCCAGCCGCCTAGCCGACTCCAGCGCTaGCTTGGTTCAAGAGCTCTCACAAGACACGCACAG +
Preference number: 6 (lower is better)
Translates to: SRRFQPPSRLQR*LGSRALTRHAQ
Trigger: CTGTGCGTGTCTTGTGAGAGCTCTTGAACCAAGTCAGCGCTGGAGTCGGCTAGGCGGCTGGAAACGGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409556.5
CDS GCA 72 bp GAGGGGCTCGAGGGACAGGACCTCGAGAGAGCACACTaGAGACCCACAGCACATGGAGGACTCACCAACAGA +
Preference number: 6 (lower is better)
Translates to: EGLEGQDLERAH*RPTAHGGLTNR
Trigger: TCTGTTGGTGAGTCCTCCATGTGCTGTGGGTCTGCAGTGTGCTCTCTCGAGGTCCTGTCCCTCGAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491383.5
CDS CAA 72 bp GCCGTTTCCAGCCGCCTAGCCGACTCCAGCGCTGACTaGGTTCAAGAGCTCTCACAAGACACGCACAGCCTC +
Preference number: 6 (lower is better)
Translates to: AVSSRLADSSAD*VQELSQDTHSL
Trigger: GAGGCTGTGCGTGTCTTGTGAGAGCTCTTGAACCAAGTCAGCGCTGGAGTCGGCTAGGCGGCTGGAAACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409556.5
CDS TCA 72 bp TCCTCCCCACCAATACCGGCCAACTTTCTCCGAGCGTaGGCACCATGGTTTCCACGCCTGCAGGAAGAGCTC +
Preference number: 6 (lower is better)
Translates to: SSPPIPANFLRA*APWFPRLQEEL
Trigger: GAGCTCTTCCTGCAGGCGTGGAAACCATGGTGCTCACGCTCGGAGAAAGTTGGCCGGTATTGGTGGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000427678.1
ENST00000441719.5
ENST00000452034.5
CDS CCA 72 bp CCGCGTAGGCTGTCGACCGAAGATGAGCCTTCCACTTaGCGGAAGAATCTCACAGGAAAGGGTGAGGGCGGT +
Preference number: 6 (lower is better)
Translates to: PRRLSTEDEPST*RKNLTGKGEGG
Trigger: ACCGCCCTCACCCTTTCCTGTGAGATTCTTCCGCCAAGTGGAAGGCTCATCTTCGGTCGACAGCCTACGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409556.5
ENST00000452034.5
CDS CCA 72 bp CTGGGGCAAGAGACAAAGCCCAAGGACCACTCGAGATaGGGAGTCCAAGGGAAAGCACCCACCCACACACAC +
Preference number: 6 (lower is better)
Translates to: LGQETKPKDHSR*GVQGKAPTHTH
Trigger: GTGTGTGTGGGTGGGTGCTTTCCCTTGGACTCCCCATCTCGAGTGGTCCTTGGGCTTTGTCTCTTGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS GCA 72 bp AAGGAGACTAGGAGGCAAAGCCTCAGCAGGACTGGCTaGCTGCTGATCCAGCCAGTGCCACAGTGCAAAACG +
Preference number: 6 (lower is better)
Translates to: KETRRQSLSRTG*LLIQPVPQCKT
Trigger: CGTTTTGCACTGTGGCACTGGCTGGATCAGCAGGCAGCCAGTCCTGCTGAGGCTTTGCCTCCTAGTCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS GCA 72 bp GCCAGTGCCACAGTGCAAAACGAGCAAGGAAATAACTaGTGCCCAGCCACTGGCCCAAAGTCCACTGGATCC +
Preference number: 6 (lower is better)
Translates to: ASATVQNEQGNN*CPATGPKSTGS
Trigger: GGATCCAGTGGACTTTGGGCCAGTGGCTGGGCAGCAGTTATTTCCTTGCTCGTTTTGCACTGTGGCACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS CCA 72 bp TGGAGAGTTGGCAGCCTGGGGAGTACTTTGCTGTCTTaGGTCCTTACTAGGTGGAGTTGCCGCAGTACAGCC +
Preference number: 6 (lower is better)
Translates to: WRVGSLGSTLLS*VLTRWSCRSTA
Trigger: GGCTGTACTGCGGCAACTCCACCTAGTAAGGACCCAAGACAGCAAAGTACTCCCCAGGCTGCCAACTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS TCA 72 bp CAAGATCCCAACCATGCAGCTGCTTTAATCAGTCTCTaGGGGGCTCGAGGGACAGGACCTCGAGAGAGCACA +
Preference number: 6 (lower is better)
Translates to: QDPNHAAALISL*GARGTGPREST
Trigger: TGTGCTCTCTCGAGGTCCTGTCCCTCGAGCCCCTCAGAGACTGATTAAAGCAGCTGCATGGTTGGGATCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491383.5
CDS GCA 72 bp ACTTTCTCCGAGCGTGAGCACCATGGTTTCCACGCCTaGAGGAAGAGCTCCTCCTGGATTGTTCTTCAACCG +
Preference number: 6 (lower is better)
Translates to: TFSEREHHGFHA*RKSSSWIVLQP
Trigger: CGGTTGAAGAACAATCCAGGAGGAGCTCTTCCTGCAGGCGTGGAAACCATGGTGCTCACGCTCGGAGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452034.5
CDS GCA 72 bp AGTGCCACAGTGCAAAACGAGCAAGGAAATAACTGCTaGCCAGCCACTGGCCCAAAGTCCACTGGATCCCAG +
Preference number: 6 (lower is better)
Translates to: SATVQNEQGNNC*PATGPKSTGSQ
Trigger: CTGGGATCCAGTGGACTTTGGGCCAGTGGCTGGGCAGCAGTTATTTCCTTGCTCGTTTTGCACTGTGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS CAA 72 bp AAGGTTAGGTGGAGAGTTGGCAGCCTGGGGAGTACTTaGCTGTCTTGGGTCCTTACTAGGTGGAGTTGCCGC +
Preference number: 6 (lower is better)
Translates to: KVRWRVGSLGST*LSWVLTRWSCR
Trigger: GCGGCAACTCCACCTAGTAAGGACCCAAGACAGCAAAGTACTCCCCAGGCTGCCAACTCTCCACCTAACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS CAA 90 bp TTTTGCTCCAAGGTTAGGTGGAGAGTTGGCAGCCTGGGGAGTACTTaGCTGTCTTGGGTCCTTACTAGGTGGAGTTGCCGCAGTACAGCC +
Preference number: 6 (lower is better)
Translates to: FCSKVRWRVGSLGST*LSWVLTRWSCRSTA
Trigger: GGCTGTACTGCGGCAACTCCACCTAGTAAGGACCCAAGACAGCAAAGTACTCCCCAGGCTGCCAACTCTCCACCTAACCTTGGAGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS TCA 72 bp GTTTCAGACCTGCCACTAGCTGCCCCTTGGAGATCCTaGACAAGTCAATGCCCCTTCTACTGTCCGCAAGTC +
Preference number: 6 (lower is better)
Translates to: VSDLPLAAPWRS*TSQCPFYCPQV
Trigger: GACTTGCGGACAGTAGAAGGGGCATTGACTTGTTCAGGATCTCCAAGGGGCAGCTAGTGGCAGGTCTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491383.5
CDS GCA 72 bp ACTTTCTCCGAGCGTGAGCACCATGGTTTCCACGCCTaGAGGAAGAGCTCCTCCCTGCAAAAACACAAAAAC +
Preference number: 6 (lower is better)
Translates to: TFSEREHHGFHA*RKSSSLQKHKN
Trigger: GTTTTTGTGTTTTTGCAGGGAGGAGCTCTTCCTGCAGGCGTGGAAACCATGGTGCTCACGCTCGGAGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427678.1
CDS CCA 72 bp CTGGGGAGTACTTTGCTGTCTTGGGTCCTTACTAGGTaGAGTTGCCGCAGTACAGCCAAGCAGTATCTCCTT +
Preference number: 6 (lower is better)
Translates to: LGSTLLSWVLTR*SCRSTAKQYLL
Trigger: AAGGAGATACTGCTTGGCTGTACTGCGGCAACTCCACCTAGTAAGGACCCAAGACAGCAAAGTACTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS CCA 72 bp TACTCCTCCTCCTCTGCAGTAAAGATGAGACAGTCCTaGTGGGACACAGCACCGGCATTAATGAAGCGTGTC +
Preference number: 6 (lower is better)
Translates to: YSSSSAVKMRQS*WDTAPALMKRV
Trigger: GACACGCTTCATTAATGCCGGTGCTGTGTCCCACCAGGACTGTCTCATCTTTACTGCAGAGGAGGAGGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498528.1
CDS CAA 90 bp AAGAAGCGGCAAAACACAGGTGAGTCCTTCTGTTGCTCCTTATCCTaGCGGAGACTGTCCAAGCGACACTCTCGGCATTTAGGCAACTGT +
Preference number: 6 (lower is better)
Translates to: KKRQNTGESFCCSLS*RRLSKRHSRHLGNC
Trigger: ACAGTTGCCTAAATGCCGAGAGTGTCGCTTGGACAGTCTCCGCAAGGATAAGGAGCAACAGAAGGACTCACCTGTGTTTTGCCGCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS TCA 72 bp CTGCTCTACCTAAGAGTGATGAGAACACTGCAGCACTaGAGGTTAAGCACTGTGTTCAAGACCCCGACAGGC +
Preference number: 6 (lower is better)
Translates to: LLYLRVMRTLQH*RLSTVFKTPTG
Trigger: GCCTGTCGGGGTCTTGAACACAGTGCTTAACCTTCAGTGCTGCAGTGTTCTCATCACTCTTAGGTAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491383.5
CDS TCA 72 bp TGGTGGGACACAGCACCGGCATTAATGAAGCGTGTCTaGACAACCCTAAGCCCATTATTAAAGCCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: WWDTAPALMKRV*TTLSPLLKPGS
Trigger: GCTGCCTGGCTTTAATAATGGGCTTAGGGTTGTTCAGACACGCTTCATTAATGCCGGTGCTGTGTCCCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498528.1
CDS GCA 72 bp AGTCACTTTGGGCAACCCATTGTAACACCAGGACTCTaGTTCTTAGACTGGGCAGTAGGGAGAAGCACAGCT +
Preference number: 6 (lower is better)
Translates to: SHFGQPIVTPGL*FLDWAVGRSTA
Trigger: AGCTGTGCTTCTCCCTACTGCCCAGTCTAAGAAGCAGAGTCCTGGTGTTACAATGGGTTGCCCAAAGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS CCA 72 bp TCTACTGTCCGCAAGTCCTGGTCCTCATTTGCAAAATaGGGGGTGTTGCAGGAACTGAAGAGAGGCTGGATT +
Preference number: 6 (lower is better)
Translates to: STVRKSWSSFAK*GVLQELKRGWI
Trigger: AATCCAGCCTCTCTTCAGTTCCTGCAACACCCCCCATTTTGCAAATGAGGACCAGGACTTGCGGACAGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491383.5
CDS CAA 72 bp AGGGGCTGGAGGAGAATCAAATCGGTTCTCACCCTGTaGGCAATTCTTTCTCTTCATCCGGTAGCAGTCCAC +
Preference number: 6 (lower is better)
Translates to: RGWRRIKSVLTL*AILSLHPVAVH
Trigger: GTGGACTGCTACCGGATGAAGAGAAAGAATTGCCAACAGGGTGAGAACCGATTTGATTCTCCTCCAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS GCA 72 bp CATCTGCTAGATCAAGTGAGCTCAGGCTTTGATTGTTaGCACAGCCTAGGAGTTCTGGGGCAAGAGACAAAG +
Preference number: 6 (lower is better)
Translates to: HLLDQVSSGFDC*HSLGVLGQETK
Trigger: CTTTGTCTCTTGCCCCAGAACTCCTAGGCTGTGGCAACAATCAAAGCCTGAGCTCACTTGATCTAGCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS GCA 72 bp CCCTACCTAACGCTAACAAAAATACTCCTCCTCCTCTaGAGTAAAGATGAGACAGTCCTGGTGGGACACAGC +
Preference number: 6 (lower is better)
Translates to: PYLTLTKILLLL*SKDETVLVGHS
Trigger: GCTGTGTCCCACCAGGACTGTCTCATCTTTACTGCAGAGGAGGAGGAGTATTTTTGTTAGCGTTAGGTAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498528.1
CDS CCA 72 bp ATTTTTGCTCCAAGGTTAGGTGGAGAGTTGGCAGCCTaGGGAGTACTTTGCTGTCTTGGGTCCTTACTAGGT +
Preference number: 6 (lower is better)
Translates to: IFAPRLGGELAA*GVLCCLGSLLG
Trigger: ACCTAGTAAGGACCCAAGACAGCAAAGTACTCCCCAGGCTGCCAACTCTCCACCTAACCTTGGAGCAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS CCA 72 bp CAACCCATTGTAACACCAGGACTCTGCTTCTTAGACTaGGCAGTAGGGAGAAGCACAGCTTGTAGTGAGCAA +
Preference number: 6 (lower is better)
Translates to: QPIVTPGLCFLD*AVGRSTACSEQ
Trigger: TTGCTCACTACAAGCTGTGCTTCTCCCTACTGCCCAGTCTAAGAAGCAGAGTCCTGGTGTTACAATGGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS CAA 72 bp CAAAACACAGGTGAGTCCTTCTGTTGCTCCTTATCCTaGCGGAGACTGTCCAAGCGACACTCTCGGCATTTA +
Preference number: 6 (lower is better)
Translates to: QNTGESFCCSLS*RRLSKRHSRHL
Trigger: TAAATGCCGAGAGTGTCGCTTGGACAGTCTCCGCAAGGATAAGGAGCAACAGAAGGACTCACCTGTGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS CAA 72 bp CTAAGTACTAGTTTCAGACCTGCCACTAGCTGCCCCTaGGAGATCCTGAACAAGTCAATGCCCCTTCTACTG +
Preference number: 6 (lower is better)
Translates to: LSTSFRPATSCP*EILNKSMPLLL
Trigger: CAGTAGAAGGGGCATTGACTTGTTCAGGATCTCCAAGGGGCAGCTAGTGGCAGGTCTGAAACTAGTACTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491383.5
CDS TCA 72 bp AAAAGGACATCTGCTAGATCAAGTGAGCTCAGGCTTTaGTTGTTGCCACAGCCTAGGAGTTCTGGGGCAAGA +
Preference number: 6 (lower is better)
Translates to: KRTSARSSELRL*LLPQPRSSGAR
Trigger: TCTTGCCCCAGAACTCCTAGGCTGTGGCAACAATCAAAGCCTGAGCTCACTTGATCTAGCAGATGTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS GCA 72 bp CAAGAATCATCCTGTACGAAGGCCTCGCCACTCTGTTaGAGCTTTTTGAGTTTAGCTGGGTCTGTCAAAACC +
Preference number: 6 (lower is better)
Translates to: QESSCTKASPLC*SFLSLAGSVKT
Trigger: GGTTTTGACAGACCCAGCTAAACTCAAAAAGCTGCAACAGAGTGGCGAGGCCTTCGTACAGGATGATTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS GCA 72 bp ACTGTCCAAGCGACACTCTCGGCATTTAGGCAACTGTaGCACGATGTTCACACAAGAATCATCCTGTACGAA +
Preference number: 6 (lower is better)
Translates to: TVQATLSAFRQL*HDVHTRIILYE
Trigger: TTCGTACAGGATGATTCTTGTGTGAACATCGTGGCACAGTTGCCTAAATGCCGAGAGTGTCGCTTGGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS CCA 72 bp ATGACATCCTTGAGGAATTTTTGCTCCAAGGTTAGGTaGAGAGTTGGCAGCCTGGGGAGTACTTTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: MTSLRNFCSKVR*RVGSLGSTLLS
Trigger: AGACAGCAAAGTACTCCCCAGGCTGCCAACTCTCCACCTAACCTTGGAGCAAAAATTCCTCAAGGATGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS CAA 90 bp GATGTTCACACAAGAATCATCCTGTACGAAGGCCTCGCCACTCTGTaGCAGCTTTTTGAGTTTAGCTGGGTCTGTCAAAACCGACTTCCT +
Preference number: 6 (lower is better)
Translates to: DVHTRIILYEGLATL*QLFEFSWVCQNRLP
Trigger: AGGAAGTCGGTTTTGACAGACCCAGCTAAACTCAAAAAGCTGCAACAGAGTGGCGAGGCCTTCGTACAGGATGATTCTTGTGTGAACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS TCA 72 bp GGCTCAGTCAGAATTTTCAAGTCTCCAGTTCCAATCTaGGAGGACTTTGAGAGCAACCCTGCTTTGCAGACA +
Preference number: 6 (lower is better)
Translates to: GSVRIFKSPVPI*EDFESNPALQT
Trigger: TGTCTGCAAAGCAGGGTTGCTCTCAAAGTCCTCTCAGATTGGAACTGGAGACTTGAAAATTCTGACTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS GCA 72 bp AGCAGTATCTCCTTAAAAACTGTTGTAGGTACAGACTaGACAGGACACATACTGGGAGAGGCCTCAGAGCAA +
Preference number: 6 (lower is better)
Translates to: SSISLKTVVGTD*TGHILGEASEQ
Trigger: TTGCTCTGAGGCCTCTCCCAGTATGTGTCCTGTGCAGTCTGTACCTACAACAGTTTTTAAGGAGATACTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS CCA 72 bp TCAACAATCATCCTGAAGCTTACCCTGCAGTCACTTTaGGCAACCCATTGTAACACCAGGACTCTGCTTCTT +
Preference number: 6 (lower is better)
Translates to: STIILKLTLQSL*ATHCNTRTLLL
Trigger: AAGAAGCAGAGTCCTGGTGTTACAATGGGTTGCCCAAAGTGACTGCAGGGTAAGCTTCAGGATGATTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS CCA 72 bp CAGGAAATGGAAGTGGTTAAAGCAGGCTTCCGAAGCTaGGATTTGCCAAAAGGACATCTGCTAGATCAAGTG +
Preference number: 6 (lower is better)
Translates to: QEMEVVKAGFRS*DLPKGHLLDQV
Trigger: CACTTGATCTAGCAGATGTCCTTTTGGCAAATCCCAGCTTCGGAAGCCTGCTTTAACCACTTCCATTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470160.1
ENST00000491383.5
CDS CCA 72 bp AGGTTAAGCACTGTGTTCAAGACCCCGACAGGCAGCTaGGCCAAGATCAGAAGTCACATCTATTCATTTTCA +
Preference number: 6 (lower is better)
Translates to: RLSTVFKTPTGS*AKIRSHIYSFS
Trigger: TGAAAATGAATAGATGTGACTTCTGATCTTGGCCCAGCTGCCTGTCGGGGTCTTGAACACAGTGCTTAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491383.5
CDS CAA 72 bp AGAAAGCGAACAGAAGTTATGGATCCCAAACCAGCTTaGTCCAACAGAGGTTTGTACGTTATTGCAGGCCAC +
Preference number: 6 (lower is better)
Translates to: RKRTEVMDPKPA*SNRGLYVIAGH
Trigger: GTGGCCTGCAATAACGTACAAACCTCTGTTGGACAAAGCTGGTTTGGGATCCATAACTTCTGTTCGCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000427678.1
ENST00000441719.5
ENST00000463013.1
CDS CAA 72 bp GACAGAAGTGGTCTCCAATGTTGGCCAAGATGTACTTaGCTGTGTCCAAATCAATCCCCACAACGTTTTTGG +
Preference number: 6 (lower is better)
Translates to: DRSGLQCWPRCT*LCPNQSPQRFW
Trigger: CCAAAAACGTTGTGGGGATTGATTTGGACACAGCAAAGTACATCTTGGCCAACATTGGAGACCACTTCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS GCA 72 bp ACAGAAGTGGTCTCCAATGTTGGCCAAGATGTACTTTaGTGTGTCCAAATCAATCCCCACAACGTTTTTGGT +
Preference number: 6 (lower is better)
Translates to: TEVVSNVGQDVL*CVQINPHNVFG
Trigger: ACCAAAAACGTTGTGGGGATTGATTTGGACACAGCAAAGTACATCTTGGCCAACATTGGAGACCACTTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS GCA 72 bp GAGAGGCTGGATTATATGATCTCTCCAAAGAGCCTTTaGACTTACTCTCATGGAAGAGTCACAGCTCAATCA +
Preference number: 6 (lower is better)
Translates to: ERLDYMISPKSL*TYSHGRVTAQS
Trigger: TGATTGAGCTGTGACTCTTCCATGAGAGTAAGTGCAAAGGCTCTTTGGAGAGATCATATAATCCAGCCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491383.5
CDS CCA 72 bp CTCTTTGTTGATCTCCCAGAAAGCGAACAGAAGTTATaGATCCCAAACCAGCTTTGTCCAACAGAGGTTTGT +
Preference number: 6 (lower is better)
Translates to: LFVDLPESEQKL*IPNQLCPTEVC
Trigger: ACAAACCTCTGTTGGACAAAGCTGGTTTGGGATCCATAACTTCTGTTCGCTTTCTGGGAGATCAACAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000427678.1
ENST00000441719.5
ENST00000463013.1
CDS CAA 72 bp GAATTTTCAAGTCTCCAGTTCCAATCTGAGAGGACTTaGAGAGCAACCCTGCTTTGCAGACATCTGGTTTTG +
Preference number: 6 (lower is better)
Translates to: EFSSLQFQSERT*RATLLCRHLVL
Trigger: CAAAACCAGATGTCTGCAAAGCAGGGTTGCTCTCAAAGTCCTCTCAGATTGGAACTGGAGACTTGAAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS CAA 72 bp AGAGAGGCTGGATTATATGATCTCTCCAAAGAGCCTTaGCACTTACTCTCATGGAAGAGTCACAGCTCAATC +
Preference number: 6 (lower is better)
Translates to: REAGLYDLSKEP*HLLSWKSHSSI
Trigger: GATTGAGCTGTGACTCTTCCATGAGAGTAAGTGCAAAGGCTCTTTGGAGAGATCATATAATCCAGCCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491383.5
CDS TCA 72 bp AATTTTCAAGTCTCCAGTTCCAATCTGAGAGGACTTTaGGAGCAACCCTGCTTTGCAGACATCTGGTTTTGT +
Preference number: 6 (lower is better)
Translates to: NFQVSSSNLRGL*EQPCFADIWFC
Trigger: ACAAAACCAGATGTCTGCAAAGCAGGGTTGCTCTCAAAGTCCTCTCAGATTGGAACTGGAGACTTGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS GCA 72 bp TACAACCATTCCAAAGACTTTCAAGATCTAGCTTCCTaGACCTTCAGATCATATGCCAACTTTCTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: YNHSKDFQDLAS*TFRSYANFLVS
Trigger: GGAGACCAGAAAGTTGGCATATGATCTGAAGGTGCAGGAAGCTAGATCTTGAAAGTCTTTGGAATGGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498528.1
CDS CCA 72 bp ATCAGTGTTTGTCTTAGGCTGAGTACAGCTGCCTTTTaGCTCAGTCAGAATTTTCAAGTCTCCAGTTCCAAT +
Preference number: 6 (lower is better)
Translates to: ISVCLRLSTAAF*LSQNFQVSSSN
Trigger: ATTGGAACTGGAGACTTGAAAATTCTGACTGAGCCAAAAGGCAGCTGTACTCAGCCTAAGACAAACACTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS CCA 72 bp CAGAAATCACCATTTGACAGAAGTGGTCTCCAATGTTaGCCAAGATGTACTTTGCTGTGTCCAAATCAATCC +
Preference number: 6 (lower is better)
Translates to: QKSPFDRSGLQC*PRCTLLCPNQS
Trigger: GGATTGATTTGGACACAGCAAAGTACATCTTGGCCAACATTGGAGACCACTTCTGTCAAATGGTGATTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS CAA 72 bp GTAACCACAAGCCAATTGCTTCATTGTCATACTTGTTaGGTGTTAAGAAGCCTTCTACCCGCAACACACCAT +
Preference number: 6 (lower is better)
Translates to: VTTSQLLHCHTC*VLRSLLPATHH
Trigger: ATGGTGTGTTGCGGGTAGAAGGCTTCTTAACACCAAACAAGTATGACAATGAAGCAATTGGCTTGTGGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS CAA 90 bp CCCACAACGTTTTTGGTTAAAGGTAACCACAAGCCAATTGCTTCATaGTCATACTTGTTTGGTGTTAAGAAGCCTTCTACCCGCAACACA +
Preference number: 6 (lower is better)
Translates to: PTTFLVKGNHKPIAS*SYLFGVKKPSTRNT
Trigger: TGTGTTGCGGGTAGAAGGCTTCTTAACACCAAACAAGTATGACAATGAAGCAATTGGCTTGTGGTTACCTTTAACCAAAAACGTTGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS CAA 90 bp TCACCATTTGACAGAAGTGGTCTCCAATGTTGGCCAAGATGTACTTaGCTGTGTCCAAATCAATCCCCACAACGTTTTTGGTTAAAGGTA +
Preference number: 6 (lower is better)
Translates to: SPFDRSGLQCWPRCT*LCPNQSPQRFWLKV
Trigger: TACCTTTAACCAAAAACGTTGTGGGGATTGATTTGGACACAGCAAAGTACATCTTGGCCAACATTGGAGACCACTTCTGTCAAATGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS TCA 72 bp CACAAGGTTATCGTGTACAACTTCAACATGAATCAGTaGCGGATCAACAATTTTCAGTGCTGGAATCTCCTC +
Preference number: 6 (lower is better)
Translates to: HKVIVYNFNMNQ*RINNFQCWNLL
Trigger: GAGGAGATTCCAGCACTGAAAATTGTTGATCCGTCACTGATTCATGTTGAAGTTGTACACGATAACCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS TCA 72 bp CCACATGTCACAAGGTTATCGTGTACAACTTCAACATaGATCAGTGACGGATCAACAATTTTCAGTGCTGGA +
Preference number: 6 (lower is better)
Translates to: PHVTRLSCTTST*ISDGSTIFSAG
Trigger: TCCAGCACTGAAAATTGTTGATCCGTCACTGATTCATGTTGAAGTTGTACACGATAACCTTGTGACATGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS TCA 72 bp CAAGAAACCCGCCAAACACAAATCAACAAAAACACTTaGTTTAACTGTGTAGAGGGGCTGGAGGAGAATCAA +
Preference number: 6 (lower is better)
Translates to: QETRQTQINKNT*FNCVEGLEENQ
Trigger: TTGATTCTCCTCCAGCCCCTCTACACAGTTAAATCAAGTGTTTTTGTTGATTTGTGTTTGGCGGGTTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441719.5
CDS CCA 72 bp ATTAAACGAGATCATAGTTGTGAAGTGCTTGCCACATaGTTAAATGCTCTTCGGTCACTCCTCCTTTTCAAC +
Preference number: 6 (lower is better)
Translates to: IKRDHSCEVLAT*LNALRSLLLFN
Trigger: GTTGAAAAGGAGGAGTGACCGAAGAGCATTTAACCATGTGGCAAGCACTTCACAACTATGATCTCGTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466058.1
CDS CAA 72 bp AAAGGTAACCACAAGCCAATTGCTTCATTGTCATACTaGTTTGGTGTTAAGAAGCCTTCTACCCGCAACACA +
Preference number: 6 (lower is better)
Translates to: KGNHKPIASLSY*FGVKKPSTRNT
Trigger: TGTGTTGCGGGTAGAAGGCTTCTTAACACCAAACAAGTATGACAATGAAGCAATTGGCTTGTGGTTACCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS CAA 90 bp GCCAAGATGTACTTTGCTGTGTCCAAATCAATCCCCACAACGTTTTaGGTTAAAGGTAACCACAAGCCAATTGCTTCATTGTCATACTTG +
Preference number: 6 (lower is better)
Translates to: AKMYFAVSKSIPTTF*VKGNHKPIASLSYL
Trigger: CAAGTATGACAATGAAGCAATTGGCTTGTGGTTACCTTTAACCAAAAACGTTGTGGGGATTGATTTGGACACAGCAAAGTACATCTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS CAA 90 bp AACAGCATACCCCTTTCCTACAACTCTTTGCAGATAAATACCAGTTaGGGCATACACTGTCACCCTGAAAGTGTTCAAATGAACAGTGTT +
Preference number: 6 (lower is better)
Translates to: NSIPLSYNSLQINTS*GIHCHPESVQMNSV
Trigger: AACACTGTTCATTTGAACACTTTCAGGGTGACAGTGTATGCCCAAACTGGTATTTATCTGCAAAGAGTTGTAGGAAAGGGGTATGCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466058.1
CDS CAA 90 bp GATTTTGCTTGTTTGGAAACCAGGGTTCCATTATTCTCAGAAGACTaGCGTTTTACAGCTCCAATTCTTGCAGAATTACCACATGTCACA +
Preference number: 6 (lower is better)
Translates to: DFACLETRVPLFSED*RFTAPILAELPHVT
Trigger: TGTGACATGTGGTAATTCTGCAAGAATTGGAGCTGTAAAACGCAAGTCTTCTGAGAATAATGGAACCCTGGTTTCCAAACAAGCAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS CAA 90 bp TTTTTGGTTAAAGGTAACCACAAGCCAATTGCTTCATTGTCATACTaGTTTGGTGTTAAGAAGCCTTCTACCCGCAACACACCATGTTTG +
Preference number: 6 (lower is better)
Translates to: FLVKGNHKPIASLSY*FGVKKPSTRNTPCL
Trigger: CAAACATGGTGTGTTGCGGGTAGAAGGCTTCTTAACACCAAACAAGTATGACAATGAAGCAATTGGCTTGTGGTTACCTTTAACCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS CAA 90 bp AATCAATCCCCACAACGTTTTTGGTTAAAGGTAACCACAAGCCAATaGCTTCATTGTCATACTTGTTTGGTGTTAAGAAGCCTTCTACCC +
Preference number: 6 (lower is better)
Translates to: NQSPQRFWLKVTTSQ*LHCHTCLVLRSLLP
Trigger: GGGTAGAAGGCTTCTTAACACCAAACAAGTATGACAATGAAGCAATTGGCTTGTGGTTACCTTTAACCAAAAACGTTGTGGGGATTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS TCA 72 bp GGCTTCAAAAGGTCTTTAGAAAGAAATACTCTTTGTTaGTCTCCCAGAAAGCGAACAGAAGTTATGGATCCC +
Preference number: 6 (lower is better)
Translates to: GFKRSLERNTLC*SPRKRTEVMDP
Trigger: GGGATCCATAACTTCTGTTCGCTTTCTGGGAGATCAACAAAGAGTATTTCTTTCTAAAGACCTTTTGAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000427678.1
ENST00000441719.5
ENST00000463013.1
CDS TCA 72 bp ATAGTTGACATAGCTTCCTTTTCAGAAATCACCATTTaGCAGAAGTGGTCTCCAATGTTGGCCAAGATGTAC +
Preference number: 6 (lower is better)
Translates to: IVDIASFSEITI*QKWSPMLAKMY
Trigger: GTACATCTTGGCCAACATTGGAGACCACTTCTGTCAAATGGTGATTTCTGAAAAGGAAGCTATGTCAACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS CCA 72 bp ACTTTGCTGTGTCCAAATCAATCCCCACAACGTTTTTaGTTAAAGGTAACCACAAGCCAATTGCTTCATTGT +
Preference number: 6 (lower is better)
Translates to: TLLCPNQSPQRF*LKVTTSQLLHC
Trigger: ACAATGAAGCAATTGGCTTGTGGTTACCTTTAACCAAAAACGTTGTGGGGATTGATTTGGACACAGCAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS CAA 72 bp TACTTTGCTGTGTCCAAATCAATCCCCACAACGTTTTaGGTTAAAGGTAACCACAAGCCAATTGCTTCATTG +
Preference number: 6 (lower is better)
Translates to: YFAVSKSIPTTF*VKGNHKPIASL
Trigger: CAATGAAGCAATTGGCTTGTGGTTACCTTTAACCAAAAACGTTGTGGGGATTGATTTGGACACAGCAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS CAA 90 bp TACATCCTGTATAGGCTTCAAAAGGTCTTTAGAAAGAAATACTCTTaGTTGATCTCCCAGAAAGCGAACAGAAGTTATGGATCCCAAACC +
Preference number: 6 (lower is better)
Translates to: YILYRLQKVFRKKYS*LISQKANRSYGSQT
Trigger: GGTTTGGGATCCATAACTTCTGTTCGCTTTCTGGGAGATCAACAAAGAGTATTTCTTTCTAAAGACCTTTTGAAGCCTATACAGGATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000427678.1
ENST00000441719.5
ENST00000463013.1
CDS CAA 72 bp TGCAGACATCTGGTTTTGTTCTCAGAGCTTCAGACTTaGTATTTAGACAGGAAGAAATTTCCTCTGGTAAAC +
Preference number: 6 (lower is better)
Translates to: CRHLVLFSELQT*YLDRKKFPLVN
Trigger: GTTTACCAGAGGAAATTTCTTCCTGTCTAAATACAAAGTCTGAAGCTCTGAGAACAAAACCAGATGTCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000488971.1
CDS CAA 72 bp ACCGACTTCCTGGATGGGGCATTCTGGATTTTATTGTaGCTTCTTGAACAACAGCTTTCATTATCTACTTTT +
Preference number: 6 (lower is better)
Translates to: TDFLDGAFWILL*LLEQQLSLSTF
Trigger: AAAAGTAGATAATGAAAGCTGTTGTTCAAGAAGCAACAATAAAATCCAGAATGCCCCATCCAGGAAGTCGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
CDS CAA 72 bp CCACAACGTTTTTGGTTAAAGGTAACCACAAGCCAATaGCTTCATTGTCATACTTGTTTGGTGTTAAGAAGC +
Preference number: 6 (lower is better)
Translates to: PQRFWLKVTTSQ*LHCHTCLVLRS
Trigger: GCTTCTTAACACCAAACAAGTATGACAATGAAGCAATTGGCTTGTGGTTACCTTTAACCAAAAACGTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000441719.5
ENST00000485171.1
CDS CAA 72 bp TATAGGCTTCAAAAGGTCTTTAGAAAGAAATACTCTTaGTTGATCTCCCAGAAAGCGAACAGAAGTTATGGA +
Preference number: 6 (lower is better)
Translates to: YRLQKVFRKKYS*LISQKANRSYG
Trigger: TCCATAACTTCTGTTCGCTTTCTGGGAGATCAACAAAGAGTATTTCTTTCTAAAGACCTTTTGAAGCCTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312912.10
ENST00000409064.5
ENST00000409556.5
ENST00000427678.1
ENST00000441719.5
ENST00000463013.1
CDS TCA 72 bp GAAGATTTGTTGTTCCATATTTCCGATCTTCAGGAGTaGTTAATCCTGCAAAAACAAAGTGCCTTAAGTTTT +
Preference number: 6 (lower is better)
Translates to: EDLLFHISDLQE*LILQKQSALSF
Trigger: AAAACTTAAGGCACTTTGTTTTTGCAGGATTAATCACTCCTGAAGATCGGAAATATGGAACAACAAATCTTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000470160.1
ENST00000483866.1
ENST00000491383.5