RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KDM1B (Homo sapiens)

Ensembl gene IDs: ENSG00000165097

Ensembl transcript IDs: ENST00000297792.9, ENST00000449850.2, ENST00000546309.6, ENST00000642162.1, ENST00000650836.2

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTGTCTATAGTGTGAAGCCCACACTATCTGTGCTGCATTCTCAATaGTACAATACCTATCTGGAAACTTTCCTGTTTTGCCAATGGGTG +
Preference number: 1 (lower is better)
Translates to: CVYSVKPTLSVLHSQ*YNTYLETFLFCQWV
Trigger: CACCCATTGGCAAAACAGGAAAGTTTCCAGATAGGTATTGTATCATTGAGAATGCAGCACAGATAGTGTGGGCTTCACACTATAGACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR CCA 90 bp AGCCCACACTATCTGTGCTGCATTCTCAATGATACAATACCTATCTaGAAACTTTCCTGTTTTGCCAATGGGTGCACAAATCTAAAACAT +
Preference number: 1 (lower is better)
Translates to: SPHYLCCILNDTIPI*KLSCFANGCTNLKH
Trigger: ATGTTTTAGATTTGTGCACCCATTGGCAAAACAGGAAAGTTTCCAGATAGGTATTGTATCATTGAGAATGCAGCACAGATAGTGTGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGGGAGGTGTCTTAAATaGCTGAGGTTCACTGCACAT +
Preference number: 2 (lower is better)
Translates to: YFKAEYLPVSTNESQQITGRCLK*LRFTAH
Trigger: ATGTGCAGTGAACCTCAGGCATTTAAGACACCTCCC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGGGAACTTCCAGCCATaGAACAATCAAATCCATGGC +
Preference number: 2 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPGNFQP*NNQIHG
Trigger: GCCATGGATTTGATTGTTCCATGGCTGGAAGTTCCC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR TCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGGTGTCTTAAATGCCTaGGGTTCACTGCACATTCTT +
Preference number: 2 (lower is better)
Translates to: YFKAEYLPVSTNESQQITGVLNA*GSLHIL
Trigger: AAGAATGTGCAGTGAACCTCAGGCATTTAAGACACC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCTCAAATTTCCCCATCTaGGGTACAGAAGAAAGCTGG +
Preference number: 2 (lower is better)
Translates to: YFKAEYLPVSTNESQQITSNFPI*GTEESW
Trigger: CCAGCTTTCTTCTGTACCCCAGATGGGGAAATTTGA...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCATCAAATTTCCCCATCTaGGGTACAGAAGAAAGCTGG +
Preference number: 2 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPSNFPI*GTEESW
Trigger: CCAGCTTTCTTCTGTACCCCAGATGGGGAAATTTGA...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGGGAACTTCCAGCCATaGAACAATCAAATCCATGGC +
Preference number: 2 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKGNFQP*NNQIHG
Trigger: GCCATGGATTTGATTGTTCCATGGCTGGAAGTTCCC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGAGATATACAGCTGTTaGCTTGTTTTGGGACCACAC +
Preference number: 2 (lower is better)
Translates to: YFKAEYLPVSTNESQQITEIYSC*LVLGPH
Trigger: GTGTGGTCCCAAAACAAGCCAACAGCTGTATATCTC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR TCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCACTGAGGTTTAACATGTaGTTCAAATTTCCCCATCTG +
Preference number: 2 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPLRFNM*FKFPHL
Trigger: CAGATGGGGAAATTTGAATCACATGTTAAACCTCAG...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR TCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCATCCATGGCCTCAACTaGAACTTACATTCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: YFKAEYLPVSTNESQQITIHGLN*NLHSAL
Trigger: TAAAGCAGAATGTAAGTTTCAGTTGAGGCCATGGAT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR TCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAATCCATGGCCTCAACTaGAACTTACATTCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPIHGLN*NLHSAL
Trigger: TAAAGCAGAATGTAAGTTTCAGTTGAGGCCATGGAT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR TCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCTCTTGGGTTAACTTTTaGGATATACAGCTGTTGGCT +
Preference number: 2 (lower is better)
Translates to: YFKAEYLPVSTNESQQITSWVNF*DIQLLA
Trigger: AGCCAACAGCTGTATATCTCAAAAGTTAACCCAAGA...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCAAGTGGAGAGGGGCTTaGTTAAATTATTCTGACAAG +
Preference number: 2 (lower is better)
Translates to: YFKAEYLPVSTNESQQITKWRGA*LNYSDK
Trigger: CTTGTCAGAATAATTTAACCAAGCCCCTCTCCACTT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR TCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCACTTTCAGCAGTAGTTaGACCTATGGAAAATGCAAT +
Preference number: 2 (lower is better)
Translates to: YFKAEYLPVSTNESQQITTFSSS*TYGKCN
Trigger: ATTGCATTTTCCATAGGTTCAACTACTGCTGAAAGT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR TCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCACAGCCATATAAAATGTaGAATCTAAAGGGAACTTCC +
Preference number: 2 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPQPYKM*NLKGTS
Trigger: GGAAGTTCCCTTTAGATTTCACATTTTATATGGCTG...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCCATTTTACTGTCAACTaGAGTTTGTGCTGTATCCAA +
Preference number: 2 (lower is better)
Translates to: YFKAEYLPVSTNESQQITHFTVN*SLCCIQ
Trigger: TTGGATACAGCACAAACTCCAGTTGACAGTAAAATG...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCTTCACTGCACATTCTTaGTGTGTTAGGTATTTACTC +
Preference number: 2 (lower is better)
Translates to: YFKAEYLPVSTNESQQITFTAHS*CVRYLL
Trigger: GAGTAAATACCTAACACACCAAGAATGTGCAGTGAA...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAACTTTCAGCAGTAGTTaGACCTATGGAAAATGCAAT +
Preference number: 2 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKTFSSS*TYGKCN
Trigger: ATTGCATTTTCCATAGGTTCAACTACTGCTGAAAGT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACAGCCATATAAAATGTaGAATCTAAAGGGAACTTCC +
Preference number: 2 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKQPYKM*NLKGTS
Trigger: GGAAGTTCCCTTTAGATTTCACATTTTATATGGCTG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR TCA 72 bp AGTGTGAAGCCCACACTATCTGTGCTGCATTCTCAATaGTACAATACCTATCTGGAAACTTTCCTGTTTTGC +
Preference number: 3 (lower is better)
Translates to: SVKPTLSVLHSQ*YNTYLETFLFC
Trigger: GCAAAACAGGAAAGTTTCCAGATAGGTATTGTATCATTGAGAATGCAGCACAGATAGTGTGGGCTTCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
3UTR-3UTR CAA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCAGCTGTTGGCTTGTTTaGGGACCACACTTTGATTGG +
Preference number: 3 (lower is better)
Translates to: YFKAEYLPVSTNESQQITSCWLV*GPHFDW
Trigger: CCAATCAAAGTGTGGTCCCAAAACAAGCCAACAGCT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGAAAAGGCACCGCTCTaGGCGCCAGCGAGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPEKAPL*APARRC
Trigger: GCACCGCCTCGCTGGCGCTCAGAGCGGTGCCTTTTC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCCGGCGCGGTTTGTGCTaGTGCAGGAGGGGCTCATGC +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITRRGLC*CRRGSC
Trigger: GCATGAGCCCCTCCTGCACCAGCACAAACCGCGCCG...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGGCTGGCATTGCCAGTaGCAGCGGCGCGGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITGWHCQ*QRRGLC
Trigger: GCACAAACCGCGCCGCTGCCACTGGCAATGCCAGCC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCACCAGCTTCCCAGGGCTaGCATTGCCAGTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPPASQG*HCQWQR
Trigger: CCGCTGCCACTGGCAATGCCAGCCCTGGGAAGCTGG...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGGACCTCCTGCTCCTTaGACAGCTCCCGGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKGPPAP*TAPGAW
Trigger: CCACGCTCCGGGAGCTGTTCAAGGAGCAGGAGGTCC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCACAGGGTCCTCACGGATaGGACAGCCTCCCCGGCAAT +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPQGPHG*DSLPGN
Trigger: ATTGCCGGGGAGGCTGTCGCATCCGTGAGGACCCTG...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCCCCGGAGCGTGGCCATaGACTGCTGCAGCACCTGTT +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITPGAWP*TAAAPV
Trigger: AACAGGTGCTGCAGCAGTGCATGGCCACGCTCCGGG...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAACAGCTCCCGGAGCGTaGCCATGCACTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPTAPGA*PCTAAA
Trigger: TGCTGCAGCAGTGCATGGCCACGCTCCGGGAGCTGT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCACAGCTCCCGGAGCGTaGCCATGCACTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITTAPGA*PCTAAA
Trigger: TGCTGCAGCAGTGCATGGCCACGCTCCGGGAGCTGT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCACGGAGAGGGCAGCCTTaGAGTGCTCCAGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPRRGQP*SAPASQ
Trigger: CTGGGAAGCTGGAGCACTCCAAGGCTGCCCTCTCCG...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR TCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCCGAGCAGATACCTGGTaGAGGTTGCTGCCACAGGCG +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITRADTW*RLLPQA
Trigger: CGCCTGTGGCAGCAACCTTCACCAGGTATCTGCTCG...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACCCGGAGCGTGGCCATaGACTGCTGCAGCACCTGTT +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKPGAWP*TAAAPV
Trigger: AACAGGTGCTGCAGCAGTGCATGGCCACGCTCCGGG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCACGCGGTTTGTGCTGGTaGAGGAGGGGCTCATGCCAA +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPRGLCW*RRGSCQ
Trigger: TTGGCATGAGCCCCTCCTGCACCAGCACAAACCGCG...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCAAAGCCCTCGCTTGCTaGCACTGGGAGGAACGTGAC +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITKALAC*HWEERD
Trigger: GTCACGTTCCTCCCAGTGCCAGCAAGCGAGGGCTTT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAAGCCCTCGCTTGCTaGCACTGGGAGGAACGTGAC +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPKALAC*HWEERD
Trigger: GTCACGTTCCTCCCAGTGCCAGCAAGCGAGGGCTTT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCATTTGCGCTGAAGAGGTaGCGGGAGTCTCGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPFALKR*RESRGK
Trigger: TTTTCCCCGAGACTCCCGGCACCTCTTCAGCGCAAA...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCCAAAAAGCCCTCGCTTaGTGGCACTGGGAGGAACGT +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITQKALA*WHWEER
Trigger: ACGTTCCTCCCAGTGCCAGCAAGCGAGGGCTTTTTG...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGTGGCCATGCACTGCTaGAGCACCTGTTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPVAMHC*STCLSS
Trigger: GGATGACAAACAGGTGCTGCAGCAGTGCATGGCCAC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCAGCGTGGCCATGCACTaGTGCAGCACCTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITSVAMH*CSTCLS
Trigger: TGACAAACAGGTGCTGCAGCAGTGCATGGCCACGCT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCAGACAGCAGGGGCGCTaGCACACTGTCTTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITRQQGR*HTVFQQ
Trigger: TTGCTGAAAGACAGTGTGGCAGCGCCCCTGCTGTCT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCTGCAGGAGGGGCTCATaGCAACACAGTCAGGGTAGT +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITCRRGS*QHSQGS
Trigger: ACTACCCTGACTGTGTTGGCATGAGCCCCTCCTGCA...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACCTGGTGAAGGTTGCTaGCACAGGCGTACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKPGEGC*HRRTPG
Trigger: ACCTGGAGTACGCCTGTGGCAGCAACCTTCACCAGG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCTGCCATCTGGATCCATaGGTCTGTGCTCCACCGAGT +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITCHLDP*VCAPPS
Trigger: ACTCGGTGGAGCACAGACCCATGGATCCAGATGGCA...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGCACACAGGACATGTTaGCGTACAGCCTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPAHRTC*RTACLF
Trigger: GAAAAGGCAGGCTGTACGGCAACATGTCCTGTGTGC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGCACACAGGACATGTTaGCGTACAGCCTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITAHRTC*RTACLF
Trigger: GAAAAGGCAGGCTGTACGGCAACATGTCCTGTGTGC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGGGGAGTTGCTGGTCTaGCATGAAAGCTTTGGGACT +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITGELLV*HESFGT
Trigger: AGTCCCAAAGCTTTCATGGCAGACCAGCAACTCCCC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAAGCGTGGCCATGCACTaGTGCAGCACCTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKSVAMH*CSTCLS
Trigger: TGACAAACAGGTGCTGCAGCAGTGCATGGCCACGCT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGGAAGTATCGGTTCATaGCTGGAACGTGCACGGAGA +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPGSIGS*LERARR
Trigger: TCTCCGTGCACGTTCCAGGCATGAACCGATACTTCC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCATACCTGGTGAAGGTTaGTGCCACAGGCGTACTCCA +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITIPGEG*CHRRTP
Trigger: TGGAGTACGCCTGTGGCAGCAACCTTCACCAGGTAT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCATTAGGGAGAAGATACTaGTCGGCTCCCACGCTGAGA +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPLGRRY*SAPTLR
Trigger: TCTCAGCGTGGGAGCCGACCAGTATCTTCTCCCTAA...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCTTAGGGAGAAGATACTaGTCGGCTCCCACGCTGAGA +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITLGRRY*SAPTLR
Trigger: TCTCAGCGTGGGAGCCGACCAGTATCTTCTCCCTAA...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGGAGTTAGCAGAGTGTaGTCACCAGCAAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITGVSRV*SPANWA
Trigger: TGCCCAGTTTGCTGGTGACCACACTCTGCTAACTCC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGGAGTTAGCAGAGTGTaGTCACCAGCAAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPGVSRV*SPANWA
Trigger: TGCCCAGTTTGCTGGTGACCACACTCTGCTAACTCC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCACTCGCTTGCTGGCACTaGGAGGAACGTGACCAAAAA +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPLACWH*EERDQK
Trigger: TTTTTGGTCACGTTCCTCCCAGTGCCAGCAAGCGAG...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAATGCCATCTGGATCCATaGGTCTGTGCTCCACCGAGT +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKCHLDP*VCAPPS
Trigger: ACTCGGTGGAGCACAGACCCATGGATCCAGATGGCA...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCAAGCCAGGTACATGGTaGGGTCTCGGGAATACTCTG +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITKPGTW*GLGNTL
Trigger: CAGAGTATTCCCGAGACCCCACCATGTACCTGGCTT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR TCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCATCTGGGAGGGAACAATaGTCTGAGGTCTCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPSGREQ*SEVSGL
Trigger: TAAGCCTGAGACCTCAGATCATTGTTCCCTCCCAGA...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCATTCTCTCCACTTCCTaGACGCATCGAATACGCACG +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITILSTS*THRIRT
Trigger: CGTGCGTATTCGATGCGTTCAGGAAGTGGAGAGAAT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGAATGTCTTCAGCAATaGTATCGTAGGCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITECLQQ*YRRPPH
Trigger: GTGGGGAGGCCTACGATATCATTGCTGAAGACATTC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAACCACAGTGCGAGGATaGGGTTTCTCAAAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKTTVRG*GFSKPG
Trigger: ACCTGGCTTTGAGAAACCTCATCCTCGCACTGTGGT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR TCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGTCCCTCCAGCTCACTaGATTGGATACCAGATTCCT +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPVPPAH*IGYQIP
Trigger: AGGAATCTGGTATCCAATTCAGTGAGCTGGAGGGAC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAATTACTGAGATGGAACTaGAGCACCTGTCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKLLRWN*STCPSS
Trigger: GCTGGAGGGACAGGTGCTTCAGTTCCATCTCAGTAA...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGGGGAGTTGCTGGTCTaGCATGAAAGCTTTGGGACT +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKGELLV*HESFGT
Trigger: AGTCCCAAAGCTTTCATGGCAGACCAGCAACTCCCC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACTCGCTTGCTGGCACTaGGAGGAACGTGACCAAAAA +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKLACWH*EERDQK
Trigger: TTTTTGGTCACGTTCCTCCCAGTGCCAGCAAGCGAG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCTCAAAGCCAGGTACATaGTGGGGTCTCGGGAATACT +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITSKPGT*WGLGNT
Trigger: AGTATTCCCGAGACCCCACCATGTACCTGGCTTTGA...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR TCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGAGGGAACAATGATCTaGGGTCTCAGGCTTAATAGC +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPEGTMI*GLRLNS
Trigger: GCTATTAAGCCTGAGACCTCAGATCATTGTTCCCTC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAATCTGGGAGGGAACAATaGTCTGAGGTCTCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKSGREQ*SEVSGL
Trigger: TAAGCCTGAGACCTCAGATCATTGTTCCCTCCCAGA...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAACTGGAGATTTGAGTTaGATGTCAAGCCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPTGDLS*MSSPSA
Trigger: GGCAGAAGGGCTTGACATTCAACTCAAATCTCCAGT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAGGCAATCTTTTCAATaGTGCCTGCGCCTAAGCTGT +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPRQSFQ*CLRLSC
Trigger: ACAGCTTAGGCGCAGGCATCATTGAAAAGATTGCCT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCCTGTGCTCCACCGAGTaGCAAAATACTTTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITLCSTE*QNTLWD
Trigger: ATCCCACAAAGTATTTTGTCACTCGGTGGAGCACAG...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGAATGTCTTCAGCAATaGTATCGTAGGCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKECLQQ*YRRPPH
Trigger: GTGGGGAGGCCTACGATATCATTGCTGAAGACATTC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCATCTGTGTCTATAGTGTaGAGCCCACACTATCTGTGC +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPSVSIV*SPHYLC
Trigger: GCACAGATAGTGTGGGCTTCACACTATAGACACAGA...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGGGACATCTTGGAGCTaGGTCTTATCCTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKGTSWS*VLSFLH
Trigger: GTGGAGAAAGGATAAGACTCAGCTCCAAGATGTCCC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACGTACTCCAGGTTACTaGGATGGAACTGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKRTPGY*DGTEAP
Trigger: AGGTGCTTCAGTTCCATCTCAGTAACCTGGAGTACG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR GCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCATGCTGCAATCTTGCTTaGTTCTCGAACGCCACTCAA +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPCCNLA*FSNATQ
Trigger: TTGAGTGGCGTTCGAGAAGCAAGCAAGATTGCAGCA...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGGGAGGTGTCTTAAATaGCTGAGGTTCACTGCACAT +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPGRCLK*LRFTAH
Trigger: ATGTGCAGTGAACCTCAGGCATTTAAGACACCTCCC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCACTCCAATTCTGTCTTTaGCTTCCAGGACAGTCACCT +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPLQFCL*LPGQSP
Trigger: AGGTGACTGTCCTGGAAGCCAAAGACAGAATTGGAG...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCCTCCAATTCTGTCTTTaGCTTCCAGGACAGTCACCT +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITLQFCL*LPGQSP
Trigger: AGGTGACTGTCCTGGAAGCCAAAGACAGAATTGGAG...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGCAAAGAATTCATTGTaGTCCCACGAGCGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITAKNSL*SHERAD
Trigger: ATCTGCTCGCTCGTGGGACCACAATGAATTCTTTGC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCATACTTTGTGGGATCTaGGACCTCCTGCTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITILCGI*DLLLLE
Trigger: TTCAAGGAGCAGGAGGTCCCAGATCCCACAAAGTAT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAATACTTTGTGGGATCTaGGACCTCCTGCTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPILCGI*DLLLLE
Trigger: TTCAAGGAGCAGGAGGTCCCAGATCCCACAAAGTAT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCAAACTGTATGCCATCTaGATCCATGGGTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITKLYAI*IHGSVL
Trigger: GAGCACAGACCCATGGATCCAGATGGCATACAGTTT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGCTGTTGGCTTGTTTTaGGACCACACTTTGATTGGG +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPAVGLF*DHTLIG
Trigger: CCCAATCAAAGTGTGGTCCCAAAACAAGCCAACAGC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACTTTGCCACACTCATTaGGCTGGTAGAAAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKLCHTH*AGRKAG
Trigger: TCCAGCCTTTCTACCAGCCCAATGAGTGTGGCAAAG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAACTGGAGATTTGAGTTaGATGTCAAGCCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKTGDLS*MSSPSA
Trigger: GGCAGAAGGGCTTGACATTCAACTCAAATCTCCAGT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAACTGCACTGGAGATTTaGGTTGAATGTCAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPTALEI*VECQAL
Trigger: AAGGGCTTGACATTCAACTCAAATCTCCAGTGCAGT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCAAGCCAGTGGTACAGTaGCTAATACCTTTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITKPVVQ*LIPFVQ
Trigger: CTGCACAAAAGGTATTAGTCACTGTACCACTGGCTT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAAGGCAATCTTTTCAATaGTGCCTGCGCCTAAGCTGT +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKRQSFQ*CLRLSC
Trigger: ACAGCTTAGGCGCAGGCATCATTGAAAAGATTGCCT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAATCTGTGTCTATAGTGTaGAGCCCACACTATCTGTGC +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKSVSIV*SPHYLC
Trigger: GCACAGATAGTGTGGGCTTCACACTATAGACACAGA...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGGTGTCTTAAATGCCTaGGGTTCACTGCACATTCTT +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPGVLNA*GSLHIL
Trigger: AAGAATGTGCAGTGAACCTCAGGCATTTAAGACACC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAATCTGTTGTCTCTGTTaGTTTCTTCTTCGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPICCLC*FLLRLP
Trigger: AGGCAGGCGAAGAAGAAAGCAACAGAGACAACAGAT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCATCTGTTGTCTCTGTTaGTTTCTTCTTCGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITICCLC*FLLRLP
Trigger: AGGCAGGCGAAGAAGAAAGCAACAGAGACAACAGAT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCATGTTGCCGTACAGCCTaGCTTTTCACATTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPCCRTA*LFTFPV
Trigger: TACAGGAAATGTGAAAAGGCAGGCTGTACGGCAACA...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCCTTCACAAAACTGTATaGCATCTGGATCCATGGGTC +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITLHKTV*HLDPWV
Trigger: GACCCATGGATCCAGATGGCATACAGTTTTGTGAAG...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGAAATGCCTGTTTGTTaGCTCACCAGCGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITEMPVC*LTSEKD
Trigger: GTCTTTTTCGCTGGTGAGGCAACAAACAGGCATTTC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCACAGTTTGTGGGAAATaGCTGTTTGTTGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITTVCGK*LFVASP
Trigger: TGGTGAGGCAACAAACAGGCATTTCCCACAAACTGT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACGCCACTCAAATATaGCCCTGTAACAGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPNATQI*PCNSLW
Trigger: CCACAAACTGTTACAGGGGCATATTTGAGTGGCGTT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAATGCTGCAATCTTGCTTaGTTCTCGAACGCCACTCAA +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKCCNLA*FSNATQ
Trigger: TTGAGTGGCGTTCGAGAAGCAAGCAAGATTGCAGCA...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCAAAATGCTGCAATCTTaGTTGCTTCTCGAACGCCAC +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITKMLQS*LLLERH
Trigger: GTGGCGTTCGAGAAGCAAGCAAGATTGCAGCATTTT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGAGCTCACATTTTTCTaGAGTTTTCCAGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPELTFF*SFPVDL
Trigger: CAGGTCCACTGGAAAACTGCAGAAAAATGTGAGCTC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGGGAGGTGTCTTAAATaGCTGAGGTTCACTGCACAT +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKGRCLK*LRFTAH
Trigger: ATGTGCAGTGAACCTCAGGCATTTAAGACACCTCCC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCCTTTGTCCTCCCCCGTaGAGTTGCCATTACATTAAA +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITLCPPP*SCHYIK
Trigger: TTTAATGTAATGGCAACTCCACGGGGGAGGACAAAG...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCACTTTGTCCTCCCCCGTaGAGTTGCCATTACATTAAA +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPLCPPP*SCHYIK
Trigger: TTTAATGTAATGGCAACTCCACGGGGGAGGACAAAG...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAATCTGTGGAGTAAGCTaGATTTCCTTGGTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPICGVS*ISLVSC
Trigger: GCAGCTTACCAAGGAAATCCAGCTTACTCCACAGAT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCATGGTCACCAGCAAACTaGGCAAAGAATTCATTGTGG +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPWSPAN*AKNSLW
Trigger: CCACAATGAATTCTTTGCCCAGTTTGCTGGTGACCA...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCTGGTCACCAGCAAACTaGGCAAAGAATTCATTGTGG +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITWSPAN*AKNSLW
Trigger: CCACAATGAATTCTTTGCCCAGTTTGCTGGTGACCA...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAAAACTGTATGCCATCTaGATCCATGGGTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKKLYAI*IHGSVL
Trigger: GAGCACAGACCCATGGATCCAGATGGCATACAGTTT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCATCTGCAGTTTTCCAGTaGACCTGCCTATGGAATACT +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPSAVFQ*TCLWNT
Trigger: AGTATTCCATAGGCAGGTCCACTGGAAAACTGCAGA...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGCTGTTGGCTTGTTTTaGGACCACACTTTGATTGGG +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKAVGLF*DHTLIG
Trigger: CCCAATCAAAGTGTGGTCCCAAAACAAGCCAACAGC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGAGATATACAGCTGTTaGCTTGTTTTGGGACCACAC +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPEIYSC*LVLGPH
Trigger: GTGTGGTCCCAAAACAAGCCAACAGCTGTATATCTC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGTCTCGGGAATACTCTaGAAACTCATAGAGCTCATC +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITVSGIL*KLIELI
Trigger: GATGAGCTCTATGAGTTTCCAGAGTATTCCCGAGAC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAACTGCACTGGAGATTTaGGTTGAATGTCAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKTALEI*VECQAL
Trigger: AAGGGCTTGACATTCAACTCAAATCTCCAGTGCAGT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAAAGCCAGTGGTACAGTaGCTAATACCTTTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKKPVVQ*LIPFVQ
Trigger: CTGCACAAAAGGTATTAGTCACTGTACCACTGGCTT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGCCAGTCAGTACCAATaGGTCTCAACAAATAACCTA +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPASQYQ*VSTNNL
Trigger: TAGGTTATTTGTTGAGACTCATTGGTACTGACTGGC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAACATTAAATAATCTTTaGGCTGAAGAGGTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPTLNNL*AEEVPG
Trigger: TCCCGGCACCTCTTCAGCGCAAAGATTATTTAATGT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACCAAAGTTATGCAGTTaGCTAGCAGCTGCTAATCCT +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKPKLCS*LAAANP
Trigger: AGGATTAGCAGCTGCTAGGCAACTGCATAACTTTGG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACTTCACAAAACTGTATaGCATCTGGATCCATGGGTC +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKLHKTV*HLDPWV
Trigger: GACCCATGGATCCAGATGGCATACAGTTTTGTGAAG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGAAATGCCTGTTTGTTaGCTCACCAGCGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKEMPVC*LTSEKD
Trigger: GTCTTTTTCGCTGGTGAGGCAACAAACAGGCATTTC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAACAGTTTGTGGGAAATaGCTGTTTGTTGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKTVCGK*LFVASP
Trigger: TGGTGAGGCAACAAACAGGCATTTCCCACAAACTGT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAAACGCCACTCAAATATaGCCCTGTAACAGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKNATQI*PCNSLW
Trigger: CCACAAACTGTTACAGGGGCATATTTGAGTGGCGTT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAAAAATGCTGCAATCTTaGTTGCTTCTCGAACGCCAC +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKKMLQS*LLLERH
Trigger: GTGGCGTTCGAGAAGCAAGCAAGATTGCAGCATTTT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAGCCCACACTATCTGTaGTGCATTCTCAATGATACA +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPSPHYL*CILNDT
Trigger: TGTATCATTGAGAATGCAGCACAGATAGTGTGGGCT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCAGCCCACACTATCTGTaGTGCATTCTCAATGATACA +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITSPHYL*CILNDT
Trigger: TGTATCATTGAGAATGCAGCACAGATAGTGTGGGCT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGAGCTCACATTTTTCTaGAGTTTTCCAGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKELTFF*SFPVDL
Trigger: CAGGTCCACTGGAAAACTGCAGAAAAATGTGAGCTC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGTTAGTATACCACAGTaGGAGGATGAGGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITVSIPQ*EDEVSQ
Trigger: TTGAGAAACCTCATCCTCGCACTGTGGTATACTAAC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCAGGTGTAGCCATTTTTaGCACATCTTTCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITRCSHF*HIFQKH
Trigger: GTGCTTCTGAAAGATGTGCCAAAAATGGCTACACCT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAGTCTTGGCTATCTGTaGAGTAAGCTGGATTTCCTT +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPSLGYL*SKLDFL
Trigger: AAGGAAATCCAGCTTACTCCACAGATAGCCAAGACT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACCCTGTAACAGTTTGTaGGAAATGCCTGTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKPCNSL*EMPVCC
Trigger: GCAACAAACAGGCATTTCCCACAAACTGTTACAGGG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAATCAAATTTCCCCATCTaGGGTACAGAAGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKSNFPI*GTEESW
Trigger: CCAGCTTTCTTCTGTACCCCAGATGGGGAAATTTGA...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAATCTGCAGTTTTCCAGTaGACCTGCCTATGGAATACT +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKSAVFQ*TCLWNT
Trigger: AGTATTCCATAGGCAGGTCCACTGGAAAACTGCAGA...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCCCCGATAATGATGACTaGTTTATTGTGGTAGTCCTT +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITPDNDD*FIVVVL
Trigger: AAGGACTACCACAATAAATCAGTCATCATTATCGGG...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCACCCGATAATGATGACTaGTTTATTGTGGTAGTCCTT +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPPDNDD*FIVVVL
Trigger: AAGGACTACCACAATAAATCAGTCATCATTATCGGG...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACTTCATCTTCTTCTCTaGCAACGGTGGATTAAACTG +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKLHLLL*QRWIKL
Trigger: CAGTTTAATCCACCGTTGTCAGAGAAGAAGATGAAG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCCTGAGGTTTAACATGTaGTTCAAATTTCCCCATCTG +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITLRFNM*FKFPHL
Trigger: CAGATGGGGAAATTTGAATCACATGTTAAACCTCAG...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGTGCTGCATTCTCAATaGTACAATACCTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITVLHSQ*YNTYLE
Trigger: TTCCAGATAGGTATTGTATCATTGAGAATGCAGCAC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCATCTTGGGTTAACTTTTaGGATATACAGCTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPSWVNF*DIQLLA
Trigger: AGCCAACAGCTGTATATCTCAAAAGTTAACCCAAGA...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAATTTCCTTGGTAAGCTaGCTCCATTTTCTACACTCA +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPISLVS*LHFLHS
Trigger: TGAGTGTAGAAAATGGAGGCAGCTTACCAAGGAAAT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCATTTCCTTGGTAAGCTaGCTCCATTTTCTACACTCA +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITISLVS*LHFLHS
Trigger: TGAGTGTAGAAAATGGAGGCAGCTTACCAAGGAAAT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCATTAATTCCAAAGTTATaGAGTTGCCTAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPLIPKL*SCLAAA
Trigger: AGCAGCTGCTAGGCAACTGCATAACTTTGGAATTAA...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGAAACTTTCCTGTTTTaGCAATGGGTGCACAAATCT +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITETFLF*QWVHKS
Trigger: AGATTTGTGCACCCATTGGCAAAACAGGAAAGTTTC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAAGGTGTAGCCATTTTTaGCACATCTTTCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKRCSHF*HIFQKH
Trigger: GTGCTTCTGAAAGATGTGCCAAAAATGGCTACACCT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAAGTCTTGGCTATCTGTaGAGTAAGCTGGATTTCCTT +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKSLGYL*SKLDFL
Trigger: AAGGAAATCCAGCTTACTCCACAGATAGCCAAGACT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGGTACAGAAGAAAGCTaGGTCCACCGAATTCTTAAA +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKGTEES*VHRILK
Trigger: TTTAAGAATTCGGTGGACCCAGCTTTCTTCTGTACC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCAAAAAGACGGTTCCTTaGATGTCTTCAGCAATGATA +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITKKTVP*MSSAMI
Trigger: TATCATTGCTGAAGACATTCAAGGAACCGTCTTTTT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACTGAGGTTTAACATGTaGTTCAAATTTCCCCATCTG +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKLRFNM*FKFPHL
Trigger: CAGATGGGGAAATTTGAATCACATGTTAAACCTCAG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAACTTTCAGCAGTAGTTaGACCTATGGAAAATGCAAT +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPTFSSS*TYGKCN
Trigger: ATTGCATTTTCCATAGGTTCAACTACTGCTGAAAGT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAATCCATGGCCTCAACTaGAACTTACATTCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKIHGLN*NLHSAL
Trigger: TAAAGCAGAATGTAAGTTTCAGTTGAGGCCATGGAT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAATCTTGGGTTAACTTTTaGGATATACAGCTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKSWVNF*DIQLLA
Trigger: AGCCAACAGCTGTATATCTCAAAAGTTAACCCAAGA...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR TCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACAAATTTATGCATGCTaGTGCCAAGTTGTTCACACA +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKQIYAC*CQVVHT
Trigger: TGTGTGAACAACTTGGCATCAGCATGCATAAATTTG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAATTAATTCCAAAGTTATaGAGTTGCCTAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKLIPKL*SCLAAA
Trigger: AGCAGCTGCTAGGCAACTGCATAACTTTGGAATTAA...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCAATGTCAAGCCCTTCTaGCAGTTTTTCAATTATCAC +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITNVKPF*QFFNYH
Trigger: GTGATAATTGAAAAACTGGCAGAAGGGCTTGACATT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGAAACTTTCCTGTTTTaGCAATGGGTGCACAAATCT +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKETFLF*QWVHKS
Trigger: AGATTTGTGCACCCATTGGCAAAACAGGAAAGTTTC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCCCACACTATCTGTGCTaGATTCTCAATGATACAATA +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITPHYLC*ILNDTI
Trigger: TATTGTATCATTGAGAATGCAGCACAGATAGTGTGG...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAATCAATACACTGCACTaGAGATTTGAGTTGAATGTC +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPINTLH*RFELNV
Trigger: GACATTCAACTCAAATCTCCAGTGCAGTGTATTGAT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGATACAATACCTATCTaGAAACTTTCCTGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITDTIPI*KLSCFA
Trigger: GGCAAAACAGGAAAGTTTCCAGATAGGTATTGTATC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCATTCACTGCACATTCTTaGTGTGTTAGGTATTTACTC +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPFTAHS*CVRYLL
Trigger: GAGTAAATACCTAACACACCAAGAATGTGCAGTGAA...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAATAGAGTACCACCAATaGTTGGAAACTTCCAATACT +
Preference number: 4 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPIEYHQ*LETSNT
Trigger: AGTATTGGAAGTTTCCAACCATTGGTGGTACTCTAT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAAATGTCAAGCCCTTCTaGCAGTTTTTCAATTATCAC +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKNVKPF*QFFNYH
Trigger: GTGATAATTGAAAAACTGGCAGAAGGGCTTGACATT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR GCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACCACACTATCTGTGCTaGATTCTCAATGATACAATA +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKPHYLC*ILNDTI
Trigger: TATTGTATCATTGAGAATGCAGCACAGATAGTGTGG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAATCAATACACTGCACTaGAGATTTGAGTTGAATGTC +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKINTLH*RFELNV
Trigger: GACATTCAACTCAAATCTCCAGTGCAGTGTATTGAT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACATTTTACTGTCAACTaGAGTTTGTGCTGTATCCAA +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKHFTVN*SLCCIQ
Trigger: TTGGATACAGCACAAACTCCAGTTGACAGTAAAATG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGATACAATACCTATCTaGAAACTTTCCTGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKDTIPI*KLSCFA
Trigger: GGCAAAACAGGAAAGTTTCCAGATAGGTATTGTATC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCTATACTGAAGTTTCTTaGCAAAATAGGCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: YFKAEYLPVSTNESQQITYTEVS*QNRHPE
Trigger: TTCAGGATGCCTATTTTGCCAAGAAACTTCAGTATA...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAAGTACCACCAATGGTTaGAAACTTCCAATACTCTTA +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKSTTNG*KLPILL
Trigger: TAAGAGTATTGGAAGTTTCCAACCATTGGTGGTACT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAATCCAGCTCACTGAATTaGATACCAGATTCCTTAATA +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKSSSLN*IPDSLI
Trigger: TATTAAGGAATCTGGTATCCAATTCAGTGAGCTGGA...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACTTAATAGCAGTATTTaGTTTCATACCGCATCGATA +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKLNSSI*FHTASI
Trigger: TATCGATGCGGTATGAAACCAAATACTGCTATTAAG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CCA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAATATACTGAAGTTTCTTaGCAAAATAGGCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKYTEVS*QNRHPE
Trigger: TTCAGGATGCCTATTTTGCCAAGAAACTTCAGTATA...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS GCA 90 bp ACCTCCTGCTCCTTGAACAGCTCCCGGAGCGTGGCCATGCACTGCTaGAGCACCTGTTTGTCATCCAGGGTCCTCACGGATGCGACAGCC +
Preference number: 5 (lower is better)
Translates to: TSCSLNSSRSVAMHC*STCLSSRVLTDATA
Trigger: GGCTGTCGCATCCGTGAGGACCCTGGATGACAAACAGGTGCTGCAGCAGTGCATGGCCACGCTCCGGGAGCTGTTCAAGGAGCAGGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000642162.1
ENST00000650836.2
CDS GCA 90 bp GGGACCTCCTGCTCCTTGAACAGCTCCCGGAGCGTGGCCATGCACTaGTGCAGCACCTGTTTGTCATCCAGGGTCCTCACGGATGCGACA +
Preference number: 5 (lower is better)
Translates to: GTSCSLNSSRSVAMH*CSTCLSSRVLTDAT
Trigger: TGTCGCATCCGTGAGGACCCTGGATGACAAACAGGTGCTGCAGCAGTGCATGGCCACGCTCCGGGAGCTGTTCAAGGAGCAGGAGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000642162.1
ENST00000650836.2
CDS GCA 90 bp CATGCACTGCTGCAGCACCTGTTTGTCATCCAGGGTCCTCACGGATaGGACAGCCTCCCCGGCAATCACAGACATCAGCACGCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: HALLQHLFVIQGPHG*DSLPGNHRHQHAVL
Trigger: AAGCACAGCGTGCTGATGTCTGTGATTGCCGGGGAGGCTGTCGCATCCGTGAGGACCCTGGATGACAAACAGGTGCTGCAGCAGTGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000642162.1
ENST00000650836.2
CDS GCA 90 bp AAGGGCTGCCATGTGCAACTGTGCAGGTTGCTCACTGCACAAGGGTaGCAATGCCTGGCTAAGCAGAAGTGGCAACCACAGGGAAGAGTG +
Preference number: 5 (lower is better)
Translates to: KGCHVQLCRLLTAQG*QCLAKQKWQPQGRV
Trigger: CACTCTTCCCTGTGGTTGCCACTTCTGCTTAGCCAGGCATTGGCACCCTTGTGCAGTGAGCAACCTGCACAGTTGCACATGGCAGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS GCA 90 bp TGCCATGTGCAACTGTGCAGGTTGCTCACTGCACAAGGGTGCCAATaGCTGGCTAAGCAGAAGTGGCAACCACAGGGAAGAGTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: CHVQLCRLLTAQGCQ*LAKQKWQPQGRVGK
Trigger: TTTGCCCACTCTTCCCTGTGGTTGCCACTTCTGCTTAGCCAGGCATTGGCACCCTTGTGCAGTGAGCAACCTGCACAGTTGCACATGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS GCA 90 bp GTTATACTGGCAAGAACAAGGGCTGCCATGTGCAACTGTGCAGGTTaGTCACTGCACAAGGGTGCCAATGCCTGGCTAAGCAGAAGTGGC +
Preference number: 5 (lower is better)
Translates to: VILARTRAAMCNCAG*SLHKGANAWLSRSG
Trigger: GCCACTTCTGCTTAGCCAGGCATTGGCACCCTTGTGCAGTGAGCAACCTGCACAGTTGCACATGGCAGCCCTTGTTCTTGCCAGTATAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS GCA 90 bp CCATGCTGTTATACTGGCAAGAACAAGGGCTGCCATGTGCAACTGTaGAGGTTGCTCACTGCACAAGGGTGCCAATGCCTGGCTAAGCAG +
Preference number: 5 (lower is better)
Translates to: PCCYTGKNKGCHVQL*RLLTAQGCQCLAKQ
Trigger: CTGCTTAGCCAGGCATTGGCACCCTTGTGCAGTGAGCAACCTGCACAGTTGCACATGGCAGCCCTTGTTCTTGCCAGTATAACAGCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS CCA 90 bp ATCACCGAGTACCCGGGAGTTAGCAGAGTGTGGTCACCAGCAAACTaGGCAAAGAATTCATTGTGGTCCCACGAGCGAGCAGATACCTGG +
Preference number: 5 (lower is better)
Translates to: ITEYPGVSRVWSPAN*AKNSLWSHERADTW
Trigger: CCAGGTATCTGCTCGCTCGTGGGACCACAATGAATTCTTTGCCCAGTTTGCTGGTGACCACACTCTGCTAACTCCCGGGTACTCGGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449850.2
ENST00000650836.2
CDS GCA 90 bp TCAACAACCCATGCTGTTATACTGGCAAGAACAAGGGCTGCCATGTaGAACTGTGCAGGTTGCTCACTGCACAAGGGTGCCAATGCCTGG +
Preference number: 5 (lower is better)
Translates to: STTHAVILARTRAAM*NCAGCSLHKGANAW
Trigger: CCAGGCATTGGCACCCTTGTGCAGTGAGCAACCTGCACAGTTGCACATGGCAGCCCTTGTTCTTGCCAGTATAACAGCATGGGTTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS CCA 90 bp ATCACCGAGTACCCGGGAGTTAGCAGAGTGTGGTCACCAGCAAACTaGGCAAAGAATTCATTGTGGTCCCACGAGCGAGCAGATACTTGT +
Preference number: 5 (lower is better)
Translates to: ITEYPGVSRVWSPAN*AKNSLWSHERADTC
Trigger: ACAAGTATCTGCTCGCTCGTGGGACCACAATGAATTCTTTGCCCAGTTTGCTGGTGACCACACTCTGCTAACTCCCGGGTACTCGGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297792.9
CDS CCA 90 bp GAGGTTTCTCAAAGCCAGGTACATGGTGGGGTCTCGGGAATACTCTaGAAACTCATAGAGCTCATCCAGTTCCATCACATCCGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: EVSQSQVHGGVSGIL*KLIELIQFHHIRPH
Trigger: GTGAGGCCGGATGTGATGGAACTGGATGAGCTCTATGAGTTTCCAGAGTATTCCCGAGACCCCACCATGTACCTGGCTTTGAGAAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449850.2
ENST00000650836.2
CDS CCA 90 bp CGTGCACCAGCAACATGCATGCCTTACGGCCTCCTTCTTGACTTGTaGTTACTGACTAAACCCTGCAACTTTCACGAACCCTGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: RAPATCMPYGLLLDL*LLTKPCNFHEPCCR
Trigger: TCTGCAGCAGGGTTCGTGAAAGTTGCAGGGTTTAGTCAGTAACCACAAGTCAAGAAGGAGGCCGTAAGGCATGCATGTTGCTGGTGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS GCA 90 bp GCTACAATCAGGACGCCATTACTACTACTGCCAGCTCCAGAATCATaGCACATACAGAACCACGTGCACCAGCAACATGCATGCCTTACG +
Preference number: 5 (lower is better)
Translates to: ATIRTPLLLLPAPES*HIQNHVHQQHACLT
Trigger: CGTAAGGCATGCATGTTGCTGGTGCACGTGGTTCTGTATGTGGCATGATTCTGGAGCTGGCAGTAGTAGTAATGGCGTCCTGATTGTAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS GCA 90 bp CAGACCCCATTATCGTTGCTACAATCAGGACGCCATTACTACTACTaGCAGCTCCAGAATCATGCCACATACAGAACCACGTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: QTPLSLLQSGRHYYY*QLQNHATYRTTCTS
Trigger: GCTGGTGCACGTGGTTCTGTATGTGGCATGATTCTGGAGCTGGCAGTAGTAGTAATGGCGTCCTGATTGTAGCAACGATAATGGGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS GCA 90 bp ACTGGTATCAACAACCCATGCTGTTATACTGGCAAGAACAAGGGCTaGCATGTGCAACTGTGCAGGTTGCTCACTGCACAAGGGTGCCAA +
Preference number: 5 (lower is better)
Translates to: TGINNPCCYTGKNKG*HVQLCRLLTAQGCQ
Trigger: TTGGCACCCTTGTGCAGTGAGCAACCTGCACAGTTGCACATGGCAGCCCTTGTTCTTGCCAGTATAACAGCATGGGTTGTTGATACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS TCA 90 bp CAGCAACATGCATGCCTTACGGCCTCCTTCTTGACTTGTGGTTACTaGCTAAACCCTGCAACTTTCACGAACCCTGCTGCAGAAGAACCA +
Preference number: 5 (lower is better)
Translates to: QQHACLTASFLTCGY*LNPATFTNPAAEEP
Trigger: TGGTTCTTCTGCAGCAGGGTTCGTGAAAGTTGCAGGGTTTAGTCAGTAACCACAAGTCAAGAAGGAGGCCGTAAGGCATGCATGTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS GCA 90 bp ATGCCTTACGGCCTCCTTCTTGACTTGTGGTTACTGACTAAACCCTaGAACTTTCACGAACCCTGCTGCAGAAGAACCAAACACCTCCAG +
Preference number: 5 (lower is better)
Translates to: MPYGLLLDLWLLTKP*NFHEPCCRRTKHLQ
Trigger: CTGGAGGTGTTTGGTTCTTCTGCAGCAGGGTTCGTGAAAGTTGCAGGGTTTAGTCAGTAACCACAAGTCAAGAAGGAGGCCGTAAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS CCA 90 bp GCCAGTTTTTCAATTATCACCGAGTACCCGGGAGTTAGCAGAGTGTaGTCACCAGCAAACTGGGCAAAGAATTCATTGTGGTCCCACGAG +
Preference number: 5 (lower is better)
Translates to: ASFSIITEYPGVSRV*SPANWAKNSLWSHE
Trigger: CTCGTGGGACCACAATGAATTCTTTGCCCAGTTTGCTGGTGACCACACTCTGCTAACTCCCGGGTACTCGGTGATAATTGAAAAACTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000650836.2
CDS CCA 90 bp CCCACTTCCACCTGTCTTCACAAAACTGTATGCCATCTGGATCCATaGGTCTGTGCTCCACCGAGTGACAAAATACTTTGTGGGATCTGG +
Preference number: 5 (lower is better)
Translates to: PTSTCLHKTVCHLDP*VCAPPSDKILCGIW
Trigger: CCAGATCCCACAAAGTATTTTGTCACTCGGTGGAGCACAGACCCATGGATCCAGATGGCATACAGTTTTGTGAAGACAGGTGGAAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000642162.1
ENST00000650836.2
CDS GCA 90 bp CCATCTGGGGTACAGAAGAAAGCTGGGTCCACCGAATTCTTAAAATaGTGCAATCTTGCTTGCTTCTCGAACGCCACTCAAATATGCCCC +
Preference number: 5 (lower is better)
Translates to: PSGVQKKAGSTEFLK*CNLACFSNATQICP
Trigger: GGGGCATATTTGAGTGGCGTTCGAGAAGCAAGCAAGATTGCAGCATTTTAAGAATTCGGTGGACCCAGCTTTCTTCTGTACCCCAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000642162.1
ENST00000650836.2
CDS GCA 90 bp AGCTCCAGAATCATGCCACATACAGAACCACGTGCACCAGCAACATaGATGCCTTACGGCCTCCTTCTTGACTTGTGGTTACTGACTAAA +
Preference number: 5 (lower is better)
Translates to: SSRIMPHTEPRAPAT*MPYGLLLDLWLLTK
Trigger: TTTAGTCAGTAACCACAAGTCAAGAAGGAGGCCGTAAGGCATGCATGTTGCTGGTGCACGTGGTTCTGTATGTGGCATGATTCTGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS GCA 90 bp ACATTTCTGAGGAGTAAGAGCTTCTTTGCAGTTAGTATACCACAGTaGGAGGATGAGGTTTCTCAAAGCCAGGTACATGGTGGGGTCTCG +
Preference number: 5 (lower is better)
Translates to: TFLRSKSFFAVSIPQ*EDEVSQSQVHGGVS
Trigger: CGAGACCCCACCATGTACCTGGCTTTGAGAAACCTCATCCTCGCACTGTGGTATACTAACTGCAAAGAAGCTCTTACTCCTCAGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449850.2
ENST00000650836.2
CDS-3UTR CAA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGGGACCTCCTGCTCCTaGAACAGCTCCCGGAGCGTG +
Preference number: 5 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKGTSCS*NSSRSV
Trigger: CACGCTCCGGGAGCTGTTCAAGGAGCAGGAGGTCCC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCACGGAGAGGGCAGCCTaGGAGTGCTCCAGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: YFKAEYLPVSTNESQQITTERAA*ECSSFP
Trigger: TGGGAAGCTGGAGCACTCCAAGGCTGCCCTCTCCGT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS CCA 90 bp GTTAGCAGAGTGTGGTCACCAGCAAACTGGGCAAAGAATTCATTGTaGTCCCACGAGCGAGCAGATACTTGTTCACACATTAATGCTACT +
Preference number: 5 (lower is better)
Translates to: VSRVWSPANWAKNSL*SHERADTCSHINAT
Trigger: AGTAGCATTAATGTGTGAACAAGTATCTGCTCGCTCGTGGGACCACAATGAATTCTTTGCCCAGTTTGCTGGTGACCACACTCTGCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297792.9
CDS GCA 90 bp TTAAAATGCTGCAATCTTGCTTGCTTCTCGAACGCCACTCAAATATaGCCCTGTAACAGTTTGTGGGAAATGCCTGTTTGTTGCCTCACC +
Preference number: 5 (lower is better)
Translates to: LKCCNLACFSNATQI*PCNSLWEMPVCCLT
Trigger: GGTGAGGCAACAAACAGGCATTTCCCACAAACTGTTACAGGGGCATATTTGAGTGGCGTTCGAGAAGCAAGCAAGATTGCAGCATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000650836.2
CDS GCA 90 bp TTAAAATGCTGCAATCTTGCTTGCTTCTCGAACGCCACTCAAATATaGCCCTGTAACAGTTTGTGGGAAATGCCTGTTTGTTGCCAGCGA +
Preference number: 5 (lower is better)
Translates to: LKCCNLACFSNATQI*PCNSLWEMPVCCQR
Trigger: TCGCTGGCAACAAACAGGCATTTCCCACAAACTGTTACAGGGGCATATTTGAGTGGCGTTCGAGAAGCAAGCAAGATTGCAGCATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS-3UTR CAA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGCAAAAAGCCCTCGCTaGCTGGCACTGGGAGGAACG +
Preference number: 5 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKAKSPR*LALGGT
Trigger: CGTTCCTCCCAGTGCCAGCAAGCGAGGGCTTTTTGC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCTGCTGCAGCACCTGTTaGTCATCCAGGGTCCTCACG +
Preference number: 5 (lower is better)
Translates to: YFKAEYLPVSTNESQQITCCSTC*SSRVLT
Trigger: CGTGAGGACCCTGGATGACAAACAGGTGCTGCAGCA...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCAACCCAGTAGGGGAGTaGCTGGTCTGCCATGAAAGC +
Preference number: 5 (lower is better)
Translates to: YFKAEYLPVSTNESQQITNPVGE*LVCHES
Trigger: GCTTTCATGGCAGACCAGCAACTCCCCTACTGGGTT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACCCAGTAGGGGAGTaGCTGGTCTGCCATGAAAGC +
Preference number: 5 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPNPVGE*LVCHES
Trigger: GCTTTCATGGCAGACCAGCAACTCCCCTACTGGGTT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAATGCTGCAGCACCTGTTaGTCATCCAGGGTCCTCACG +
Preference number: 5 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKCCSTC*SSRVLT
Trigger: CGTGAGGACCCTGGATGACAAACAGGTGCTGCAGCA...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACTCACACAGAGGGCTTaGCCACACTCATTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKLTQRA*PHSLGW
Trigger: CCAGCCCAATGAGTGTGGCAAAGCCCTCTGTGTGAG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS CCA 90 bp AGCAGTATTTGGTTTCATACCGCATCGATAAGTCTTGGCTATCTGTaGAGTAAGCTGGATTTCCTTGGTAAGCTGCCTCCATTTTCTACA +
Preference number: 5 (lower is better)
Translates to: SSIWFHTASISLGYL*SKLDFLGKLPPFST
Trigger: TGTAGAAAATGGAGGCAGCTTACCAAGGAAATCCAGCTTACTCCACAGATAGCCAAGACTTATCGATGCGGTATGAAACCAAATACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000650836.2
CDS-3UTR CAA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCAGCACACAGGACATGTaGCCGTACAGCCTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: YFKAEYLPVSTNESQQITSTQDM*PYSLPF
Trigger: AAAAGGCAGGCTGTACGGCAACATGTCCTGTGTGCT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCCCTCCAATTCTGTCTTaGGCTTCCAGGACAGTCACC +
Preference number: 5 (lower is better)
Translates to: YFKAEYLPVSTNESQQITPPILS*ASRTVT
Trigger: GGTGACTGTCCTGGAAGCCAAAGACAGAATTGGAGG...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCTGGGCAAAGAATTCATaGTGGTCCCACGAGCGAGCA +
Preference number: 5 (lower is better)
Translates to: YFKAEYLPVSTNESQQITWAKNS*WSHERA
Trigger: TGCTCGCTCGTGGGACCACAATGAATTCTTTGCCCA...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS TCA 90 bp CTGTTGATAGCCTTCATCTTCTTCTCTGACAACGGTGGATTAAACTaGATGGCACCTTTCTGTAGTAAAGCCAGTGGTACAGTGACTAAT +
Preference number: 5 (lower is better)
Translates to: LLIAFIFFSDNGGLN*MAPFCSKASGTVTN
Trigger: ATTAGTCACTGTACCACTGGCTTTACTACAGAAAGGTGCCATTCAGTTTAATCCACCGTTGTCAGAGAAGAAGATGAAGGCTATCAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000642162.1
ENST00000650836.2
CDS TCA 90 bp TCCATGCGCTTGTCAATAGTGGGGTCAGTTATTCTTCCACCTTCCTaGATTAAGTCACATCTTTCTCCAAATTTATGCATGCTGATGCCA +
Preference number: 5 (lower is better)
Translates to: SMRLSIVGSVILPPS*IKSHLSPNLCMLMP
Trigger: TGGCATCAGCATGCATAAATTTGGAGAAAGATGTGACTTAATTCAGGAAGGTGGAAGAATAACTGACCCCACTATTGACAAGCGCATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449850.2
ENST00000650836.2
CDS-3UTR CAA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAAGCACACAGGACATGTaGCCGTACAGCCTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKSTQDM*PYSLPF
Trigger: AAAAGGCAGGCTGTACGGCAACATGTCCTGTGTGCT...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAACCTCCAATTCTGTCTTaGGCTTCCAGGACAGTCACC +
Preference number: 5 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKPPILS*ASRTVT
Trigger: GGTGACTGTCCTGGAAGCCAAAGACAGAATTGGAGG...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCCCTGCGCCTAAGCTGTaGATAGCCTTCATCTTCTTC +
Preference number: 5 (lower is better)
Translates to: YFKAEYLPVSTNESQQITPAPKL*IAFIFF
Trigger: GAAGAAGATGAAGGCTATCAACAGCTTAGGCGCAGG...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGTGGGAAATGCCTGTTaGTTGCCTCACCAGCGAAAA +
Preference number: 5 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPVGNAC*LPHQRK
Trigger: TTTTCGCTGGTGAGGCAACAAACAGGCATTTCCCAC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCATGCTGCAATCTTGCTaGCTTCTCGAACGCCACTCA +
Preference number: 5 (lower is better)
Translates to: YFKAEYLPVSTNESQQITMLQSC*LLERHS
Trigger: TGAGTGGCGTTCGAGAAGCAAGCAAGATTGCAGCAT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAATGCTGCAATCTTGCTaGCTTCTCGAACGCCACTCA +
Preference number: 5 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPMLQSC*LLERHS
Trigger: TGAGTGGCGTTCGAGAAGCAAGCAAGATTGCAGCAT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS TCA 90 bp TCACACATTAATGCTACTGGGTTGTTAATACACCCATTGACAATCTaGGCTCCTCTTCCCACTGTGACGCCTTTAAAAGATTTATCATCC +
Preference number: 5 (lower is better)
Translates to: SHINATGLLIHPLTI*APLPTVTPLKDLSS
Trigger: GGATGATAAATCTTTTAAAGGCGTCACAGTGGGAAGAGGAGCTCAGATTGTCAATGGGTGTATTAACAACCCAGTAGCATTAATGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000650836.2
CDS-3UTR CAA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCACACTGGAGATTTGAGTaGAATGTCAAGCCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPHWRFE*NVKPFC
Trigger: GCAGAAGGGCTTGACATTCAACTCAAATCTCCAGTG...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCCACTGGAGATTTGAGTaGAATGTCAAGCCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: YFKAEYLPVSTNESQQITHWRFE*NVKPFC
Trigger: GCAGAAGGGCTTGACATTCAACTCAAATCTCCAGTG...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGGAAATGCCTGTTTGTaGCCTCACCAGCGAAAAAGA +
Preference number: 5 (lower is better)
Translates to: YFKAEYLPVSTNESQQITGNACL*PHQRKR
Trigger: TCTTTTTCGCTGGTGAGGCAACAAACAGGCATTTCC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGGAAATGCCTGTTTGTaGCCTCACCAGCGAAAAAGA +
Preference number: 5 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPGNACL*PHQRKR
Trigger: TCTTTTTCGCTGGTGAGGCAACAAACAGGCATTTCC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAGCTGTTGGCTTGTTTaGGGACCACACTTTGATTGG +
Preference number: 5 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPSCWLV*GPHFDW
Trigger: CCAATCAAAGTGTGGTCCCAAAACAAGCCAACAGCT...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS TCA 90 bp TTATCCTTTCTCCACTCAGAGACAACATCCAAGAGAGCATTAAAATaGAAATCCATGCGCTTGTCAATAGTGGGGTCAGTTATTCTTCCA +
Preference number: 5 (lower is better)
Translates to: LSFLHSETTSKRALK*KSMRLSIVGSVILP
Trigger: TGGAAGAATAACTGACCCCACTATTGACAAGCGCATGGATTTTCATTTTAATGCTCTCTTGGATGTTGTCTCTGAGTGGAGAAAGGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449850.2
ENST00000650836.2
CDS CCA 90 bp GATACATCAATATGCTTCATAAGTAGTGAAACACATCACAAACATTaGGAATTGGACATTTCTGGCTCCAGACCCCATTATCGTTGCTAC +
Preference number: 5 (lower is better)
Translates to: DTSICFISSETHHKH*ELDISGSRPHYRCY
Trigger: GTAGCAACGATAATGGGGTCTGGAGCCAGAAATGTCCAATTCCCAATGTTTGTGATGTGTTTCACTACTTATGAAGCATATTGATGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS-3UTR CAA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGGACTAGGTTCGGTTTaGCCATTGCTAGTCCATATT +
Preference number: 5 (lower is better)
Translates to: YFKAEYLPVSTNESQQITGLGSV*PLLVHI
Trigger: AATATGGACTAGCAATGGCAAAACCGAACCTAGTCC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGGACTAGGTTCGGTTTaGCCATTGCTAGTCCATATT +
Preference number: 5 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPGLGSV*PLLVHI
Trigger: AATATGGACTAGCAATGGCAAAACCGAACCTAGTCC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAATCTGCCATGAAAGCTTaGGGACTAGGTTCGGTTTTG +
Preference number: 5 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKSAMKA*GLGSVL
Trigger: CAAAACCGAACCTAGTCCCAAAGCTTTCATGGCAGA...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCTTCTACACTCAGGTTTaGTACACTGAACCCAGTAGG +
Preference number: 5 (lower is better)
Translates to: YFKAEYLPVSTNESQQITFYTQV*YTEPSR
Trigger: CCTACTGGGTTCAGTGTACAAAACCTGAGTGTAGAA...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGTAAGCTGGATTTCCTaGGTAAGCTGCCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPVSWIS*VSCLHF
Trigger: AAAATGGAGGCAGCTTACCAAGGAAATCCAGCTTAC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAATGCCCCTGTAACAGTTaGTGGGAAATGCCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKCPCNS*WEMPVC
Trigger: ACAAACAGGCATTTCCCACAAACTGTTACAGGGGCA...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCATATACAGCTGTTGGCTaGTTTTGGGACCACACTTTG +
Preference number: 5 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPYTAVG*FWDHTL
Trigger: CAAAGTGTGGTCCCAAAACAAGCCAACAGCTGTATA...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAATTCTACACTCAGGTTTaGTACACTGAACCCAGTAGG +
Preference number: 5 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKFYTQV*YTEPSR
Trigger: CCTACTGGGTTCAGTGTACAAAACCTGAGTGTAGAA...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGTAAGCTGGATTTCCTaGGTAAGCTGCCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKVSWIS*VSCLHF
Trigger: AAAATGGAGGCAGCTTACCAAGGAAATCCAGCTTAC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAATATACAGCTGTTGGCTaGTTTTGGGACCACACTTTG +
Preference number: 5 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKYTAVG*FWDHTL
Trigger: CAAAGTGTGGTCCCAAAACAAGCCAACAGCTGTATA...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCGAGTACCACCAATGGTaGGAAACTTCCAATACTCTT +
Preference number: 5 (lower is better)
Translates to: YFKAEYLPVSTNESQQITEYHQW*ETSNTL
Trigger: AAGAGTATTGGAAGTTTCCAACCATTGGTGGTACTC...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR CAA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCCTCCAGCTCACTGAATaGGATACCAGATTCCTTAAT +
Preference number: 5 (lower is better)
Translates to: YFKAEYLPVSTNESQQITLQLTE*DTRFLN
Trigger: ATTAAGGAATCTGGTATCCAATTCAGTGAGCTGGAG...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR CAA 90 bp ACAAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAGAAAAAGACGGTTCCTaGAATGTCTTCAGCAATGAT +
Preference number: 5 (lower is better)
Translates to: TKYLEASFYCQLEFVLYPEKDGS*NVFSND
Trigger: ATCATTGCTGAAGACATTCAAGGAACCGTCTTTTTC...TGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGGAGTAAGAGCTTCTTaGCAGTTAGTATACCACAGT +
Preference number: 5 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKGVRAS*QLVYHS
Trigger: ACTGTGGTATACTAACTGCAAAGAAGCTCTTACTCC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650836.2
CDS-3UTR CAA 90 bp TACTTTAAAGCAGAATACTTGCCAGTCAGTACCAATGAGTCTCAACAAATAACCATTAATGCTACTGGGTaGTTAATACACCCATTGACA +
Preference number: 5 (lower is better)
Translates to: YFKAEYLPVSTNESQQITINATG*LIHPLT
Trigger: TGTCAATGGGTGTATTAACAACCCAGTAGCATTAAT...GGTTATTTGTTGAGACTCATTGGTACTGACTGGCAAGTATTCTGCTTTAAAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS-3UTR CAA 90 bp AAAATACCTAGAAGCTTCATTTTACTGTCAACTGGAGTTTGTGCTGTATCCAAAGAAAAAGACGGTTCCTaGAATGTCTTCAGCAATGAT +
Preference number: 5 (lower is better)
Translates to: KIPRSFILLSTGVCAVSKEKDGS*NVFSND
Trigger: ATCATTGCTGAAGACATTCAAGGAACCGTCTTTTTC...TTTGGATACAGCACAAACTCCAGTTGACAGTAAAATGAAGCTTCTAGGTATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS CAA 72 bp TCCCGGAGCGTGGCCATGCACTGCTGCAGCACCTGTTaGTCATCCAGGGTCCTCACGGATGCGACAGCCTCC +
Preference number: 6 (lower is better)
Translates to: SRSVAMHCCSTC*SSRVLTDATAS
Trigger: GGAGGCTGTCGCATCCGTGAGGACCCTGGATGACAAACAGGTGCTGCAGCAGTGCATGGCCACGCTCCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000642162.1
ENST00000650836.2
CDS CAA 90 bp TTGAACAGCTCCCGGAGCGTGGCCATGCACTGCTGCAGCACCTGTTaGTCATCCAGGGTCCTCACGGATGCGACAGCCTCCCCGGCAATC +
Preference number: 6 (lower is better)
Translates to: LNSSRSVAMHCCSTC*SSRVLTDATASPAI
Trigger: GATTGCCGGGGAGGCTGTCGCATCCGTGAGGACCCTGGATGACAAACAGGTGCTGCAGCAGTGCATGGCCACGCTCCGGGAGCTGTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000642162.1
ENST00000650836.2
CDS GCA 72 bp TGGCATTGCCAGTGGCAGCGGCGCGGTTTGTGCTGGTaGAGGAGGGGCTCATGCCAACACAGTCAGGGTAGT +
Preference number: 6 (lower is better)
Translates to: WHCQWQRRGLCW*RRGSCQHSQGS
Trigger: ACTACCCTGACTGTGTTGGCATGAGCCCCTCCTGCACCAGCACAAACCGCGCCGCTGCCACTGGCAATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449850.2
ENST00000650836.2
CDS GCA 72 bp CTGCAGCACCTGTTTGTCATCCAGGGTCCTCACGGATaGGACAGCCTCCCCGGCAATCACAGACATCAGCAC +
Preference number: 6 (lower is better)
Translates to: LQHLFVIQGPHG*DSLPGNHRHQH
Trigger: GTGCTGATGTCTGTGATTGCCGGGGAGGCTGTCGCATCCGTGAGGACCCTGGATGACAAACAGGTGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000642162.1
ENST00000650836.2
CDS GCA 72 bp TCCTTGAACAGCTCCCGGAGCGTGGCCATGCACTGCTaGAGCACCTGTTTGTCATCCAGGGTCCTCACGGAT +
Preference number: 6 (lower is better)
Translates to: SLNSSRSVAMHC*STCLSSRVLTD
Trigger: ATCCGTGAGGACCCTGGATGACAAACAGGTGCTGCAGCAGTGCATGGCCACGCTCCGGGAGCTGTTCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000642162.1
ENST00000650836.2
CDS CCA 72 bp TGTGCAGGTTGCTCACTGCACAAGGGTGCCAATGCCTaGCTAAGCAGAAGTGGCAACCACAGGGAAGAGTGG +
Preference number: 6 (lower is better)
Translates to: CAGCSLHKGANA*LSRSGNHREEW
Trigger: CCACTCTTCCCTGTGGTTGCCACTTCTGCTTAGCCAGGCATTGGCACCCTTGTGCAGTGAGCAACCTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS GCA 72 bp GGCCTCCCCACTTCCACCTGTCTTCACAAAACTGTATaGCATCTGGATCCATGGGTCTGTGCTCCACCGAGT +
Preference number: 6 (lower is better)
Translates to: GLPTSTCLHKTV*HLDPWVCAPPS
Trigger: ACTCGGTGGAGCACAGACCCATGGATCCAGATGGCATACAGTTTTGTGAAGACAGGTGGAAGTGGGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000642162.1
ENST00000650836.2
CDS GCA 72 bp CATGTGCAACTGTGCAGGTTGCTCACTGCACAAGGGTaGCAATGCCTGGCTAAGCAGAAGTGGCAACCACAG +
Preference number: 6 (lower is better)
Translates to: HVQLCRLLTAQG*QCLAKQKWQPQ
Trigger: CTGTGGTTGCCACTTCTGCTTAGCCAGGCATTGGCACCCTTGTGCAGTGAGCAACCTGCACAGTTGCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS GCA 72 bp TATACTGGCAAGAACAAGGGCTGCCATGTGCAACTGTaGAGGTTGCTCACTGCACAAGGGTGCCAATGCCTG +
Preference number: 6 (lower is better)
Translates to: YTGKNKGCHVQL*RLLTAQGCQCL
Trigger: CAGGCATTGGCACCCTTGTGCAGTGAGCAACCTGCACAGTTGCACATGGCAGCCCTTGTTCTTGCCAGTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS GCA 72 bp CATGCTGTTATACTGGCAAGAACAAGGGCTGCCATGTaGAACTGTGCAGGTTGCTCACTGCACAAGGGTGCC +
Preference number: 6 (lower is better)
Translates to: HAVILARTRAAM*NCAGCSLHKGA
Trigger: GGCACCCTTGTGCAGTGAGCAACCTGCACAGTTGCACATGGCAGCCCTTGTTCTTGCCAGTATAACAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS CCA 72 bp TACCCGGGAGTTAGCAGAGTGTGGTCACCAGCAAACTaGGCAAAGAATTCATTGTGGTCCCACGAGCGAGCA +
Preference number: 6 (lower is better)
Translates to: YPGVSRVWSPAN*AKNSLWSHERA
Trigger: TGCTCGCTCGTGGGACCACAATGAATTCTTTGCCCAGTTTGCTGGTGACCACACTCTGCTAACTCCCGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000650836.2
CDS CAA 90 bp CCACGTGCACCAGCAACATGCATGCCTTACGGCCTCCTTCTTGACTaGTGGTTACTGACTAAACCCTGCAACTTTCACGAACCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: PRAPATCMPYGLLLD*WLLTKPCNFHEPCC
Trigger: GCAGCAGGGTTCGTGAAAGTTGCAGGGTTTAGTCAGTAACCACAAGTCAAGAAGGAGGCCGTAAGGCATGCATGTTGCTGGTGCACGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS TCA 72 bp ATGCCATCTGGATCCATGGGTCTGTGCTCCACCGAGTaGCAAAATACTTTGTGGGATCTGGGACCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: MPSGSMGLCSTE*QNTLWDLGPPA
Trigger: AGCAGGAGGTCCCAGATCCCACAAAGTATTTTGTCACTCGGTGGAGCACAGACCCATGGATCCAGATGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000642162.1
ENST00000650836.2
CDS GCA 72 bp TCCAGGACAGTCACCTTAATTCCAAAGTTATGCAGTTaGCTAGCAGCTGCTAATCCTGCTGGACCAGCCCCG +
Preference number: 6 (lower is better)
Translates to: SRTVTLIPKLCS*LAAANPAGPAP
Trigger: CGGGGCTGGTCCAGCAGGATTAGCAGCTGCTAGGCAACTGCATAACTTTGGAATTAAGGTGACTGTCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000650836.2
CDS TCA 72 bp GCATGCCTTACGGCCTCCTTCTTGACTTGTGGTTACTaGCTAAACCCTGCAACTTTCACGAACCCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: ACLTASFLTCGY*LNPATFTNPAA
Trigger: TGCAGCAGGGTTCGTGAAAGTTGCAGGGTTTAGTCAGTAACCACAAGTCAAGAAGGAGGCCGTAAGGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS GCA 72 bp AGGACGCCATTACTACTACTGCCAGCTCCAGAATCATaGCACATACAGAACCACGTGCACCAGCAACATGCA +
Preference number: 6 (lower is better)
Translates to: RTPLLLLPAPES*HIQNHVHQQHA
Trigger: TGCATGTTGCTGGTGCACGTGGTTCTGTATGTGGCATGATTCTGGAGCTGGCAGTAGTAGTAATGGCGTCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS CAA 90 bp TGGGAAATGCCTGTTTGTTGCCTCACCAGCGAAAAAGACGGTTCCTaGAATGTCTTCAGCAATGATATCGTAGGCCTCCCCACTTCCACC +
Preference number: 6 (lower is better)
Translates to: WEMPVCCLTSEKDGS*NVFSNDIVGLPTST
Trigger: GGTGGAAGTGGGGAGGCCTACGATATCATTGCTGAAGACATTCAAGGAACCGTCTTTTTCGCTGGTGAGGCAACAAACAGGCATTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000650836.2
CDS GCA 72 bp ATCATGCCACATACAGAACCACGTGCACCAGCAACATaGATGCCTTACGGCCTCCTTCTTGACTTGTGGTTA +
Preference number: 6 (lower is better)
Translates to: IMPHTEPRAPAT*MPYGLLLDLWL
Trigger: TAACCACAAGTCAAGAAGGAGGCCGTAAGGCATGCATGTTGCTGGTGCACGTGGTTCTGTATGTGGCATGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS GCA 72 bp AACAACCCATGCTGTTATACTGGCAAGAACAAGGGCTaGCATGTGCAACTGTGCAGGTTGCTCACTGCACAA +
Preference number: 6 (lower is better)
Translates to: NNPCCYTGKNKG*HVQLCRLLTAQ
Trigger: TTGTGCAGTGAGCAACCTGCACAGTTGCACATGGCAGCCCTTGTTCTTGCCAGTATAACAGCATGGGTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS CCA 72 bp CCACTTCCACCTGTCTTCACAAAACTGTATGCCATCTaGATCCATGGGTCTGTGCTCCACCGAGTGACAAAA +
Preference number: 6 (lower is better)
Translates to: PLPPVFTKLYAI*IHGSVLHRVTK
Trigger: TTTTGTCACTCGGTGGAGCACAGACCCATGGATCCAGATGGCATACAGTTTTGTGAAGACAGGTGGAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000642162.1
ENST00000650836.2
CDS CCA 72 bp CAAAGCCAGGTACATGGTGGGGTCTCGGGAATACTCTaGAAACTCATAGAGCTCATCCAGTTCCATCACATC +
Preference number: 6 (lower is better)
Translates to: QSQVHGGVSGIL*KLIELIQFHHI
Trigger: GATGTGATGGAACTGGATGAGCTCTATGAGTTTCCAGAGTATTCCCGAGACCCCACCATGTACCTGGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449850.2
ENST00000650836.2
CDS CCA 72 bp GCAACATGCATGCCTTACGGCCTCCTTCTTGACTTGTaGTTACTGACTAAACCCTGCAACTTTCACGAACCC +
Preference number: 6 (lower is better)
Translates to: ATCMPYGLLLDL*LLTKPCNFHEP
Trigger: GGGTTCGTGAAAGTTGCAGGGTTTAGTCAGTAACCACAAGTCAAGAAGGAGGCCGTAAGGCATGCATGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS CAA 72 bp AGAGTGTGGTCACCAGCAAACTGGGCAAAGAATTCATaGTGGTCCCACGAGCGAGCAGATACTTGTTCACAC +
Preference number: 6 (lower is better)
Translates to: RVWSPANWAKNS*WSHERADTCSH
Trigger: GTGTGAACAAGTATCTGCTCGCTCGTGGGACCACAATGAATTCTTTGCCCAGTTTGCTGGTGACCACACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297792.9
CDS CAA 72 bp CCTGTTTGTTGCCTCACCAGCGAAAAAGACGGTTCCTaGAATGTCTTCAGCAATGATATCGTAGGCCTCCCC +
Preference number: 6 (lower is better)
Translates to: PVCCLTSEKDGS*NVFSNDIVGLP
Trigger: GGGGAGGCCTACGATATCATTGCTGAAGACATTCAAGGAACCGTCTTTTTCGCTGGTGAGGCAACAAACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000650836.2
CDS CAA 90 bp CTTGCTTGCTTCTCGAACGCCACTCAAATATGCCCCTGTAACAGTTaGTGGGAAATGCCTGTTTGTTGCCTCACCAGCGAAAAAGACGGT +
Preference number: 6 (lower is better)
Translates to: LACFSNATQICPCNS*WEMPVCCLTSEKDG
Trigger: ACCGTCTTTTTCGCTGGTGAGGCAACAAACAGGCATTTCCCACAAACTGTTACAGGGGCATATTTGAGTGGCGTTCGAGAAGCAAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000650836.2
CDS TCA 72 bp CAGCGAAAAAGACGGTTCCTTGAATGTCTTCAGCAATaGTATCGTAGGCCTCCCCACTTCCACCTGTCTTCA +
Preference number: 6 (lower is better)
Translates to: QRKRRFLECLQQ*YRRPPHFHLSS
Trigger: TGAAGACAGGTGGAAGTGGGGAGGCCTACGATATCATTGCTGAAGACATTCAAGGAACCGTCTTTTTCGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000642162.1
ENST00000650836.2
CDS GCA 72 bp TTGGCTTCCAGGACAGTCACCTTAATTCCAAAGTTATaGAGTTGCCTAGCAGCTGCTAATCCTGCTGGACCA +
Preference number: 6 (lower is better)
Translates to: LASRTVTLIPKL*SCLAAANPAGP
Trigger: TGGTCCAGCAGGATTAGCAGCTGCTAGGCAACTGCATAACTTTGGAATTAAGGTGACTGTCCTGGAAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000650836.2
CDS GCA 72 bp GGCCTCCTTCTTGACTTGTGGTTACTGACTAAACCCTaGAACTTTCACGAACCCTGCTGCAGAAGAACCAAA +
Preference number: 6 (lower is better)
Translates to: GLLLDLWLLTKP*NFHEPCCRRTK
Trigger: TTTGGTTCTTCTGCAGCAGGGTTCGTGAAAGTTGCAGGGTTTAGTCAGTAACCACAAGTCAAGAAGGAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS GCA 72 bp GAATTGGACATTTCTGGCTCCAGACCCCATTATCGTTaGTACAATCAGGACGCCATTACTACTACTGCCAGC +
Preference number: 6 (lower is better)
Translates to: ELDISGSRPHYR*YNQDAITTTAS
Trigger: GCTGGCAGTAGTAGTAATGGCGTCCTGATTGTAGCAACGATAATGGGGTCTGGAGCCAGAAATGTCCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS GCA 72 bp ACCTCACACTACCACTACACTGGTATCAACAACCCATaGTGTTATACTGGCAAGAACAAGGGCTGCCATGTG +
Preference number: 6 (lower is better)
Translates to: TSHYHYTGINNP*CYTGKNKGCHV
Trigger: CACATGGCAGCCCTTGTTCTTGCCAGTATAACAGCATGGGTTGTTGATACCAGTGTAGTGGTAGTGTGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS CCA 72 bp GTGTGGTCACCAGCAAACTGGGCAAAGAATTCATTGTaGTCCCACGAGCGAGCAGATACTTGTTCACACATT +
Preference number: 6 (lower is better)
Translates to: VWSPANWAKNSL*SHERADTCSHI
Trigger: AATGTGTGAACAAGTATCTGCTCGCTCGTGGGACCACAATGAATTCTTTGCCCAGTTTGCTGGTGACCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297792.9
CDS CCA 72 bp TCAATTATCACCGAGTACCCGGGAGTTAGCAGAGTGTaGTCACCAGCAAACTGGGCAAAGAATTCATTGTGG +
Preference number: 6 (lower is better)
Translates to: SIITEYPGVSRV*SPANWAKNSLW
Trigger: CCACAATGAATTCTTTGCCCAGTTTGCTGGTGACCACACTCTGCTAACTCCCGGGTACTCGGTGATAATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000650836.2
CDS CCA 72 bp TCGAACGCCACTCAAATATGCCCCTGTAACAGTTTGTaGGAAATGCCTGTTTGTTGCCAGCGAAAAAGACGG +
Preference number: 6 (lower is better)
Translates to: SNATQICPCNSL*EMPVCCQRKRR
Trigger: CCGTCTTTTTCGCTGGCAACAAACAGGCATTTCCCACAAACTGTTACAGGGGCATATTTGAGTGGCGTTCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS CAA 72 bp TTCTCGAACGCCACTCAAATATGCCCCTGTAACAGTTaGTGGGAAATGCCTGTTTGTTGCCTCACCAGCGAA +
Preference number: 6 (lower is better)
Translates to: FSNATQICPCNS*WEMPVCCLTSE
Trigger: TTCGCTGGTGAGGCAACAAACAGGCATTTCCCACAAACTGTTACAGGGGCATATTTGAGTGGCGTTCGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000650836.2
CDS CAA 72 bp CCAGCAACATGCATGCCTTACGGCCTCCTTCTTGACTaGTGGTTACTGACTAAACCCTGCAACTTTCACGAA +
Preference number: 6 (lower is better)
Translates to: PATCMPYGLLLD*WLLTKPCNFHE
Trigger: TTCGTGAAAGTTGCAGGGTTTAGTCAGTAACCACAAGTCAAGAAGGAGGCCGTAAGGCATGCATGTTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS CAA 72 bp GGAATTGGACATTTCTGGCTCCAGACCCCATTATCGTaGCTACAATCAGGACGCCATTACTACTACTGCCAG +
Preference number: 6 (lower is better)
Translates to: GIGHFWLQTPLS*LQSGRHYYYCQ
Trigger: CTGGCAGTAGTAGTAATGGCGTCCTGATTGTAGCAACGATAATGGGGTCTGGAGCCAGAAATGTCCAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS CAA 90 bp GGAGTTAGCAGAGTGTGGTCACCAGCAAACTGGGCAAAGAATTCATaGTGGTCCCACGAGCGAGCAGATACTTGTTCACACATTAATGCT +
Preference number: 6 (lower is better)
Translates to: GVSRVWSPANWAKNS*WSHERADTCSHINA
Trigger: AGCATTAATGTGTGAACAAGTATCTGCTCGCTCGTGGGACCACAATGAATTCTTTGCCCAGTTTGCTGGTGACCACACTCTGCTAACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297792.9
CDS CAA 90 bp CTTGCTTGCTTCTCGAACGCCACTCAAATATGCCCCTGTAACAGTTaGTGGGAAATGCCTGTTTGTTGCCAGCGAAAAAGACGGTTCCTT +
Preference number: 6 (lower is better)
Translates to: LACFSNATQICPCNS*WEMPVCCQRKRRFL
Trigger: AAGGAACCGTCTTTTTCGCTGGCAACAAACAGGCATTTCCCACAAACTGTTACAGGGGCATATTTGAGTGGCGTTCGAGAAGCAAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS TCA 72 bp TTTCTGGTCATAAAATACAGTATTCTCTCCACTTCCTaGACGCATCGAATACGCACGAGACCCCGGACGATG +
Preference number: 6 (lower is better)
Translates to: FLVIKYSILSTS*THRIRTRPRTM
Trigger: CATCGTCCGGGGTCTCGTGCGTATTCGATGCGTTCAGGAAGTGGAGAGAATACTGTATTTTATGACCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000650836.2
CDS GCA 72 bp CCACTCAAATATGCCCCTGTAACAGTTTGTGGGAAATaGCTGTTTGTTGCCTCACCAGCGAAAAAGACGGTT +
Preference number: 6 (lower is better)
Translates to: PLKYAPVTVCGK*LFVASPAKKTV
Trigger: AACCGTCTTTTTCGCTGGTGAGGCAACAAACAGGCATTTCCCACAAACTGTTACAGGGGCATATTTGAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000650836.2
CDS GCA 72 bp CCACTCAAATATGCCCCTGTAACAGTTTGTGGGAAATaGCTGTTTGTTGCCAGCGAAAAAGACGGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: PLKYAPVTVCGK*LFVASEKDGSL
Trigger: CAAGGAACCGTCTTTTTCGCTGGCAACAAACAGGCATTTCCCACAAACTGTTACAGGGGCATATTTGAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS CCA 72 bp TGGTTTCATACCGCATCGATAAGTCTTGGCTATCTGTaGAGTAAGCTGGATTTCCTTGGTAAGCTGCCTCCA +
Preference number: 6 (lower is better)
Translates to: WFHTASISLGYL*SKLDFLGKLPP
Trigger: TGGAGGCAGCTTACCAAGGAAATCCAGCTTACTCCACAGATAGCCAAGACTTATCGATGCGGTATGAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000650836.2
CDS CCA 72 bp TCGAACGCCACTCAAATATGCCCCTGTAACAGTTTGTaGGAAATGCCTGTTTGTTGCCTCACCAGCGAAAAA +
Preference number: 6 (lower is better)
Translates to: SNATQICPCNSL*EMPVCCLTSEK
Trigger: TTTTTCGCTGGTGAGGCAACAAACAGGCATTTCCCACAAACTGTTACAGGGGCATATTTGAGTGGCGTTCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000650836.2
CDS CAA 72 bp AAATGCCTGTTTGTTGCCAGCGAAAAAGACGGTTCCTaGAATGTCTTCAGCAATGATATCGTAGGCCTCCCC +
Preference number: 6 (lower is better)
Translates to: KCLFVASEKDGS*NVFSNDIVGLP
Trigger: GGGGAGGCCTACGATATCATTGCTGAAGACATTCAAGGAACCGTCTTTTTCGCTGGCAACAAACAGGCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS CAA 90 bp TTTTGGCACATCTTTCAGAAGCACTTGCAAAGCACACAGGACATGTaGCCGTACAGCCTGCCTTTTCACATTTCCTGTACTTCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: FWHIFQKHLQSTQDM*PYSLPFHISCTSSL
Trigger: CAGAGAAGAAGTACAGGAAATGTGAAAAGGCAGGCTGTACGGCAACATGTCCTGTGTGCTTTGCAAGTGCTTCTGAAAGATGTGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000650836.2
CDS CAA 90 bp TTAGGGAGAAGATACTGGTCGGCTCCCACGCTGAGAACTCCAGTGTaGATGAGACCTTTTCTGGTCATAAAATACAGTATTCTCTCCACT +
Preference number: 6 (lower is better)
Translates to: LGRRYWSAPTLRTPV*MRPFLVIKYSILST
Trigger: AGTGGAGAGAATACTGTATTTTATGACCAGAAAAGGTCTCATCAACACTGGAGTTCTCAGCGTGGGAGCCGACCAGTATCTTCTCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000650836.2
CDS TCA 72 bp GGAGTAAGAGCTTCTAGATCCTCTGGGAGGGAACAATaGTCTGAGGTCTCAGGCTTAATAGCAGTATTTGGT +
Preference number: 6 (lower is better)
Translates to: GVRASRSSGREQ*SEVSGLIAVFG
Trigger: ACCAAATACTGCTATTAAGCCTGAGACCTCAGATCATTGTTCCCTCCCAGAGGATCTAGAAGCTCTTACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297792.9
CDS GCA 72 bp TGCAATCTTGCTTGCTTCTCGAACGCCACTCAAATATaGCCCTGTAACAGTTTGTGGGAAATGCCTGTTTGT +
Preference number: 6 (lower is better)
Translates to: CNLACFSNATQI*PCNSLWEMPVC
Trigger: ACAAACAGGCATTTCCCACAAACTGTTACAGGGGCATATTTGAGTGGCGTTCGAGAAGCAAGCAAGATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000642162.1
ENST00000650836.2
CDS GCA 72 bp GTACAGAAGAAAGCTGGGTCCACCGAATTCTTAAAATaGTGCAATCTTGCTTGCTTCTCGAACGCCACTCAA +
Preference number: 6 (lower is better)
Translates to: VQKKAGSTEFLK*CNLACFSNATQ
Trigger: TTGAGTGGCGTTCGAGAAGCAAGCAAGATTGCAGCATTTTAAGAATTCGGTGGACCCAGCTTTCTTCTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000642162.1
ENST00000650836.2
CDS CCA 72 bp ACCTGTCTTCACAAAACTGTATGCCATCTGGATCCATaGGTCTGTGCTCCACCGAGTGACAAAATACTTTGT +
Preference number: 6 (lower is better)
Translates to: TCLHKTVCHLDP*VCAPPSDKILC
Trigger: ACAAAGTATTTTGTCACTCGGTGGAGCACAGACCCATGGATCCAGATGGCATACAGTTTTGTGAAGACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000546309.6
ENST00000642162.1
ENST00000650836.2
CDS CAA 72 bp AAAGGAGGTAGGATGAGCATAGAGTACCACCAATGGTaGGAAACTTCCAATACTCTTAGATCCTCTGGGAGG +
Preference number: 6 (lower is better)
Translates to: KGGRMSIEYHQW*ETSNTLRSSGR
Trigger: CCTCCCAGAGGATCTAAGAGTATTGGAAGTTTCCAACCATTGGTGGTACTCTATGCTCATCCTACCTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449850.2
ENST00000650836.2
CDS CAA 72 bp TTCTCGAACGCCACTCAAATATGCCCCTGTAACAGTTaGTGGGAAATGCCTGTTTGTTGCCAGCGAAAAAGA +
Preference number: 6 (lower is better)
Translates to: FSNATQICPCNS*WEMPVCCQRKR
Trigger: TCTTTTTCGCTGGCAACAAACAGGCATTTCCCACAAACTGTTACAGGGGCATATTTGAGTGGCGTTCGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS TCA 72 bp GCCTTCATCTTCTTCTCTGACAACGGTGGATTAAACTaGATGGCACCTTTCTGTAGTAAAGCCAGTGGTACA +
Preference number: 6 (lower is better)
Translates to: AFIFFSDNGGLN*MAPFCSKASGT
Trigger: TGTACCACTGGCTTTACTACAGAAAGGTGCCATTCAGTTTAATCCACCGTTGTCAGAGAAGAAGATGAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000642162.1
ENST00000650836.2
CDS CAA 72 bp GATTTATCATCCCAGACTCGGCCTCCAATTCTGTCTTaGGCTTCCAGGACAGTCACCTTAATTCCAAAGTTA +
Preference number: 6 (lower is better)
Translates to: DLSSQTRPPILS*ASRTVTLIPKL
Trigger: TAACTTTGGAATTAAGGTGACTGTCCTGGAAGCCAAAGACAGAATTGGAGGCCGAGTCTGGGATGATAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000650836.2
CDS TCA 72 bp AATGCTACTGGGTTGTTAATACACCCATTGACAATCTaGGCTCCTCTTCCCACTGTGACGCCTTTAAAAGAT +
Preference number: 6 (lower is better)
Translates to: NATGLLIHPLTI*APLPTVTPLKD
Trigger: ATCTTTTAAAGGCGTCACAGTGGGAAGAGGAGCTCAGATTGTCAATGGGTGTATTAACAACCCAGTAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297792.9
ENST00000449850.2
ENST00000650836.2
CDS TCA 72 bp ACTTCCAATACTCTTAGATCCTCTGGGAGGGAACAATaGTCTGAGGTCTCAGGCTTAATAGCAGTATTTGGT +
Preference number: 6 (lower is better)
Translates to: TSNTLRSSGREQ*SEVSGLIAVFG
Trigger: ACCAAATACTGCTATTAAGCCTGAGACCTCAGATCATTGTTCCCTCCCAGAGGATCTAAGAGTATTGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449850.2
ENST00000650836.2
CDS TCA 72 bp TCTTCTATCTTTTCTCCTAAAGGGACATCTTGGAGCTaGGTCTTATCCTTTCTCCACTCAGAGACAACATCC +
Preference number: 6 (lower is better)
Translates to: SSIFSPKGTSWS*VLSFLHSETTS
Trigger: GGATGTTGTCTCTGAGTGGAGAAAGGATAAGACTCAGCTCCAAGATGTCCCTTTAGGAGAAAAGATAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449850.2
ENST00000650836.2
CDS CCA 72 bp AACAAACAGCAACAGAACCTCACACTACCACTACACTaGTATCAACAACCCATGCTGTTATACTGGCAAGAA +
Preference number: 6 (lower is better)
Translates to: NKQQQNLTLPLH*YQQPMLLYWQE
Trigger: TTCTTGCCAGTATAACAGCATGGGTTGTTGATACCAGTGTAGTGGTAGTGTGAGGTTCTGTTGCTGTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS CAA 72 bp ATGGAACTGAAGCACCTGTCCCTCCAGCTCACTGAATaGGATACCAGATTCCTTAATAAATGCCTTGTAGAT +
Preference number: 6 (lower is better)
Translates to: MELKHLSLQLTE*DTRFLNKCLVD
Trigger: ATCTACAAGGCATTTATTAAGGAATCTGGTATCCAATTCAGTGAGCTGGAGGGACAGGTGCTTCAGTTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449850.2
ENST00000650836.2
CDS CAA 90 bp GTTACTGAGATGGAACTGAAGCACCTGTCCCTCCAGCTCACTGAATaGGATACCAGATTCCTTAATAAATGCCTTGTAGATTTCTTCTAT +
Preference number: 6 (lower is better)
Translates to: VTEMELKHLSLQLTE*DTRFLNKCLVDFFY
Trigger: ATAGAAGAAATCTACAAGGCATTTATTAAGGAATCTGGTATCCAATTCAGTGAGCTGGAGGGACAGGTGCTTCAGTTCCATCTCAGTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449850.2
ENST00000650836.2
CDS CCA 72 bp ATATGCTTCATAAGTAGTGAAACACATCACAAACATTaGGAATTGGACATTTCTGGCTCCAGACCCCATTAT +
Preference number: 6 (lower is better)
Translates to: ICFISSETHHKH*ELDISGSRPHY
Trigger: ATAATGGGGTCTGGAGCCAGAAATGTCCAATTCCCAATGTTTGTGATGTGTTTCACTACTTATGAAGCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642162.1
CDS CAA 72 bp TCCAGAATAATCAATACACTGCACTGGAGATTTGAGTaGAATGTCAAGCCCTTCTGCCAGTTTTTCAATTAT +
Preference number: 6 (lower is better)
Translates to: SRIINTLHWRFE*NVKPFCQFFNY
Trigger: ATAATTGAAAAACTGGCAGAAGGGCTTGACATTCAACTCAAATCTCCAGTGCAGTGTATTGATTATTCTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297792.9
ENST00000650836.2
CDS CAA 72 bp AGAATAATCAATACACTGCACCTGTGGAGATTTGAGTaGAATGTCAAGCCCTTCTGCCAGTTTTTCAATTAT +
Preference number: 6 (lower is better)
Translates to: RIINTLHLWRFE*NVKPFCQFFNY
Trigger: ATAATTGAAAAACTGGCAGAAGGGCTTGACATTCAACTCAAATCTCCACAGGTGCAGTGTATTGATTATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449850.2