Pregenerated sensors for KDM1A (Homo sapiens)
Ensembl gene IDs: ENSG00000004487Ensembl transcript IDs: ENST00000356634.7, ENST00000400181.9, ENST00000465864.2, ENST00000481879.1, ENST00000494920.1, ENST00000602503.1
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCCGGGCCGCCGACGGCCGTAGGGGCCGCTCGCTCTGTCGCTCCGTaGGTCCGAAAAGCCTTGCCTCGCCTCGCTTCACGCTGCCCGCGC | + |
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Preference number: 5 (lower is better) Translates to: AGPPTAVGAARSVAP*VRKALPRLASRCPR Trigger: GCGCGGGCAGCGTGAAGCGAGGCGAGGCAAGGCTTTTCGGACCCACGGAGCGACAGAGCGAGCGGCCCCTACGGCCGTCGGCGGCCCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS GCA 90 bp | GTCGCTCCGTGGGTCCGAAAAGCCTTGCCTCGCCTCGCTTCACGCTaGCCGCGCGCCGCCAACCGCCGTCGCGTACGCACGCGCCAAGCG | + |
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Preference number: 5 (lower is better) Translates to: VAPWVRKALPRLASR*PRAANRRRVRTRQA Trigger: CGCTTGGCGCGTGCGTACGCGACGGCGGTTGGCGGCGCGCGGGCAGCGTGAAGCGAGGCGAGGCAAGGCTTTTCGGACCCACGGAGCGAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356634.7 ENST00000465864.2 |
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| CDS GCA 90 bp | CTTCGCCCGCTTGCGCCGGCTGGTCCGACGCCCCTCCGGAGTCTCTaGTATTCCAGTTTCCATGGGGGTCGCAGACCCAGGCACGACAGT | + |
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Preference number: 5 (lower is better) Translates to: LRPLAPAGPTPLRSL*YSSFHGGRRPRHDS Trigger: ACTGTCGTGCCTGGGTCTGCGACCCCCATGGAAACTGGAATAGCAGAGACTCCGGAGGGGCGTCGGACCAGCCGGCGCAAGCGGGCGAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS CCA 90 bp | CCTGGTGTGGCCTGGCGAGGCAGCGTATACATGGCCCCCAAAAACTaGTCTGCAATTCTTCCCGCTTCTCGCAGCCCACTCAGCAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: PGVAWRGSVYMAPKN*SAILPASRSPLSRA Trigger: TGCTCTGCTGAGTGGGCTGCGAGAAGCGGGAAGAATTGCAGACCAGTTTTTGGGGGCCATGTATACGCTGCCTCGCCAGGCCACACCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 ENST00000602503.1 |
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| CDS GCA 90 bp | TGTGGCCTGGCGAGGCAGCGTATACATGGCCCCCAAAAACTGGTCTaGAATTCTTCCCGCTTCTCGCAGCCCACTCAGCAGAGCACCATG | + |
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Preference number: 5 (lower is better) Translates to: CGLARQRIHGPQKLV*NSSRFSQPTQQSTM Trigger: CATGGTGCTCTGCTGAGTGGGCTGCGAGAAGCGGGAAGAATTGCAGACCAGTTTTTGGGGGCCATGTATACGCTGCCTCGCCAGGCCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 ENST00000602503.1 |
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| CDS TCA 90 bp | CCTTCTGGGAGGGAGCCTCGCTACCCTGAAGCACAGGACATTTGGTaGTCAGGGACACTTAAGCCTCGCAGCTCAGCAGGTCTGGGCTAT | + |
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Preference number: 5 (lower is better) Translates to: PSGREPRYPEAQDIW*SGTLKPRSSAGLGY Trigger: ATAGCCCAGACCTGCTGAGCTGCGAGGCTTAAGTGTCCCTGATCACCAAATGTCCTGTGCTTCAGGGTAGCGAGGCTCCCTCCCAGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS CCA 90 bp | AGATGTTTTCCACTCAGGGAGAGGTGGCACAAACTGAACGGCTGGTaGCTGCTGCTTCAGCACACCCAGGGGAAGGGTACAGAGAACTGC | + |
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Preference number: 5 (lower is better) Translates to: RCFPLRERWHKLNGW*LLLQHTQGKGTENC Trigger: GCAGTTCTCTGTACCCTTCCCCTGGGTGTGCTGAAGCAGCAGCCACCAGCCGTTCAGTTTGTGCCACCTCTCCCTGAGTGGAAAACATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS CCA 90 bp | TGCAGATGTTTTCCACTCAGGGAGAGGTGGCACAAACTGAACGGCTaGTGGCTGCTGCTTCAGCACACCCAGGGGAAGGGTACAGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: CRCFPLRERWHKLNG*WLLLQHTQGKGTEN Trigger: GTTCTCTGTACCCTTCCCCTGGGTGTGCTGAAGCAGCAGCCACCAGCCGTTCAGTTTGTGCCACCTCTCCCTGAGTGGAAAACATCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS CCA 90 bp | GCCTCTTCCCAAATAAGCCCAGATAGTTTGCCAGCTTCTCACCTGTaGGGCACCTGGAATCGAGGGGCCAGGAGTGATTGGCTGAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: ASSQISPDSLPASHL*GTWNRGARSDWLSH Trigger: ATGGCTCAGCCAATCACTCCTGGCCCCTCGATTCCAGGTGCCCCACAGGTGAGAAGCTGGCAAACTATCTGGGCTTATTTGGGAAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS GCA 90 bp | ACCCTAGATCCCTCCTTGCCCCACCTACCTACTTACCTGAGGTACTaGACTGCTACCAAAAATCCCTTTGAGAATGGCCAGGCATCGGCC | + |
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Preference number: 5 (lower is better) Translates to: TLDPSLPHLPTYLRY*TATKNPFENGQASA Trigger: GGCCGATGCCTGGCCATTCTCAAAGGGATTTTTGGTAGCAGTGCAGTACCTCAGGTAAGTAGGTAGGTGGGGCAAGGAGGGATCTAGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS CCA 90 bp | AAATCCCATCCTTTGGACTGCAGATGTTTTCCACTCAGGGAGAGGTaGCACAAACTGAACGGCTGGTGGCTGCTGCTTCAGCACACCCAG | + |
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Preference number: 5 (lower is better) Translates to: KSHPLDCRCFPLRER*HKLNGWWLLLQHTQ Trigger: CTGGGTGTGCTGAAGCAGCAGCCACCAGCCGTTCAGTTTGTGCCACCTCTCCCTGAGTGGAAAACATCTGCAGTCCAAAGGATGGGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS TCA 90 bp | GCTCACCCCTGCTGGCAGTCGTACTGCCAACATGCCCGAACAAATTaGCACTTGGATCCCAGAACACCCGATCAAAACACAACACCACCT | + |
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Preference number: 5 (lower is better) Translates to: AHPCWQSYCQHARTN*HLDPRTPDQNTTPP Trigger: AGGTGGTGTTGTGTTTTGATCGGGTGTTCTGGGATCCAAGTGTCAATTTGTTCGGGCATGTTGGCAGTACGACTGCCAGCAGGGGTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS TCA 90 bp | GTCGTGGAATCGGCTGTGGGGCACCTGGAATCGAGGGGCCAGGAGTaGTTGGCTGAGCCATTAAATCATAGTCATTTCCAGATGATCCTG | + |
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Preference number: 5 (lower is better) Translates to: VVESAVGHLESRGQE*LAEPLNHSHFQMIL Trigger: CAGGATCATCTGGAAATGACTATGATTTAATGGCTCAGCCAATCACTCCTGGCCCCTCGATTCCAGGTGCCCCACAGCCGATTCCACGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS TCA 90 bp | GCCAGCTTCTCACCTGTGGGGCACCTGGAATCGAGGGGCCAGGAGTaGTTGGCTGAGCCATTAAATCATAGTCATTTCCAGATGATCCTG | + |
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Preference number: 5 (lower is better) Translates to: ASFSPVGHLESRGQE*LAEPLNHSHFQMIL Trigger: CAGGATCATCTGGAAATGACTATGATTTAATGGCTCAGCCAATCACTCCTGGCCCCTCGATTCCAGGTGCCCCACAGGTGAGAAGCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS GCA 90 bp | GACCTGTTACCACCATGGCTCCAAGATCAGCTACATAGTTTCCTTTaGGAAATGTGGCAACTCGTCCACCCACACGATCCCTGGCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: DLLPPWLQDQLHSFL*EMWQLVHPHDPWLP Trigger: TGGAAGCCAGGGATCGTGTGGGTGGACGAGTTGCCACATTTCGCAAAGGAAACTATGTAGCTGATCTTGGAGCCATGGTGGTAACAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS GCA 90 bp | TGGTGGCTGCTGCTTCAGCACACCCAGGGGAAGGGTACAGAGAACTaGGTCGCATTTATAAATAAAGGTTTGACTCGTGGAGCGGGTATT | + |
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Preference number: 5 (lower is better) Translates to: WWLLLQHTQGKGTEN*VAFINKGLTRGAGI Trigger: AATACCCGCTCCACGAGTCAAACCTTTATTTATAAATGCGACGCAGTTCTCTGTACCCTTCCCCTGGGTGTGCTGAAGCAGCAGCCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS GCA 90 bp | CACATGGACAAAAGGACTTCAGACAGGAAGGATGCCCCTCCATGTTaGCTTCCTGTCTATGAATCCAGAGATCTACACAGGGCTTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: HMDKRTSDRKDAPPC*LPVYESRDLHRAWP Trigger: AGGCCAAGCCCTGTGTAGATCTCTGGATTCATAGACAGGAAGGCAACATGGAGGGGCATCCTTCCTGTCTGAAGTCCTTTTGTCCATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS TCA 90 bp | TGGCCAGGCATCGGCCAACAATCACATCGTCACTTATGTTTTCCATaGTACCAGCAGCTTCTCCTGCCACTAGTGCCAACAGTATTGGAG | + |
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Preference number: 5 (lower is better) Translates to: WPGIGQQSHRHLCFP*YQQLLLPLVPTVLE Trigger: CTCCAATACTGTTGGCACTAGTGGCAGGAGAAGCTGCTGGTATCATGGAAAACATAAGTGACGATGTGATTGTTGGCCGATGCCTGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 ENST00000602503.1 |
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| CDS GCA 90 bp | ACACAACACCACCTTGTTAAGGTTGCCAAATCCCATCCTTTGGACTaGAGATGTTTTCCACTCAGGGAGAGGTGGCACAAACTGAACGGC | + |
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Preference number: 5 (lower is better) Translates to: TQHHLVKVAKSHPLD*RCFPLRERWHKLNG Trigger: GCCGTTCAGTTTGTGCCACCTCTCCCTGAGTGGAAAACATCTGCAGTCCAAAGGATGGGATTTGGCAACCTTAACAAGGTGGTGTTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS CCA 90 bp | CCTGCTGGCAGTCGTACTGCCAACATGCCCGAACAAATTGACACTTaGATCCCAGAACACCCGATCAAAACACAACACCACCTTGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: PAGSRTANMPEQIDT*IPEHPIKTQHHLVK Trigger: CTTAACAAGGTGGTGTTGTGTTTTGATCGGGTGTTCTGGGATCCAAGTGTCAATTTGTTCGGGCATGTTGGCAGTACGACTGCCAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS GCA 90 bp | CTTCTGGGTCTGTTGTGGTCCACTGATAATATCTGGAAAACAGGCTaGTTCTTGAGAAGTCATCCGGTCATGAGGAAGTCGGCTCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: LLGLLWSTDNIWKTG*FLRSHPVMRKSALE Trigger: TTCCAGAGCCGACTTCCTCATGACCGGATGACTTCTCAAGAAGCAGCCTGTTTTCCAGATATTATCAGTGGACCACAACAGACCCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS TCA 90 bp | CAGTTTCTTTGGGCTGAGGTACTGCACTGCTACCAAAAATCCCTTTaGGAATGGCCAGGCATCGGCCAACAATCACATCGTCACTTATGT | + |
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Preference number: 5 (lower is better) Translates to: QFLWAEVLHCYQKSL*EWPGIGQQSHRHLC Trigger: ACATAAGTGACGATGTGATTGTTGGCCGATGCCTGGCCATTCTCAAAGGGATTTTTGGTAGCAGTGCAGTACCTCAGCCCAAAGAAACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS TCA 90 bp | CCTACCTACTTACCTGAGGTACTGCACTGCTACCAAAAATCCCTTTaGGAATGGCCAGGCATCGGCCAACAATCACATCGTCACTTATGT | + |
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Preference number: 5 (lower is better) Translates to: PTYLPEVLHCYQKSL*EWPGIGQQSHRHLC Trigger: ACATAAGTGACGATGTGATTGTTGGCCGATGCCTGGCCATTCTCAAAGGGATTTTTGGTAGCAGTGCAGTACCTCAGGTAAGTAGGTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS CCA 90 bp | GATACTCACTGGAGTTTGGCCATTTTGTCTAAAATGTCAGGGATCTaGTGTGACTCTAAAGCCGGAGGAGAAATGCAGCTAGCAGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: DTHWSLAILSKMSGI*CDSKAGGEMQLAAF Trigger: GAAGGCTGCTAGCTGCATTTCTCCTCCGGCTTTAGAGTCACACCAGATCCCTGACATTTTAGACAAAATGGCCAAACTCCAGTGAGTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS TCA 90 bp | GACTTCAGACAGGAAGGATGCCCCTCCATGTTGCCTTCCTGTCTATaGATCCAGAGATCTACACAGGGCTTGGCCTTTATTCTCTTTTAT | + |
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Preference number: 5 (lower is better) Translates to: DFRQEGCPSMLPSCL*IQRSTQGLAFILFY Trigger: ATAAAAGAGAATAAAGGCCAAGCCCTGTGTAGATCTCTGGATTCATAGACAGGAAGGCAACATGGAGGGGCATCCTTCCTGTCTGAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS TCA 90 bp | TCCTCAAAAACTTCCTTATCAGGCCCCACCTTATTCCTGGTGCTCTaGAATCTGATGACAAGACACACGCAGTACCATTCAAATGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: SSKTSLSGPTLFLVL*NLMTRHTQYHSNAK Trigger: CTTCGCATTTGAATGGTACTGCGTGTGTCTTGTCATCAGATTTCAGAGCACCAGGAATAAGGTGGGGCCTGATAAGGAAGTTTTTGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS TCA 90 bp | GAACTCAAAGTCATCATCCTGATCCCAGTGCTTAAGGGAGAGAGTTaGGAGAGGTGTGGCATTAGCAAATTCAAGATTTGCAAAATGCCA | + |
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Preference number: 5 (lower is better) Translates to: ELKVIILIPVLKGES*ERCGISKFKICKMP Trigger: TGGCATTTTGCAAATCTTGAATTTGCTAATGCCACACCTCTCTCAACTCTCTCCCTTAAGCACTGGGATCAGGATGATGACTTTGAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS GCA 90 bp | GGTGCTCTGAAATCTGATGACAAGACACACGCAGTACCATTCAAATaGGAAGAGACAGATTATGTTTCTGAAACAGCATACAGAACTCTT | + |
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Preference number: 5 (lower is better) Translates to: GALKSDDKTHAVPFK*EETDYVSETAYRTL Trigger: AAGAGTTCTGTATGCTGTTTCAGAAACATAATCTGTCTCTTCGCATTTGAATGGTACTGCGTGTGTCTTGTCATCAGATTTCAGAGCACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS CCA 90 bp | TTTAGGAACCTTGACAGTGTCAGCTTGTCCGTTGGCTTCATAAAGTaGGCATTTTTGCTTGATCTTGGCCAGTTCCATATTTACTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: FRNLDSVSLSVGFIK*AFLLDLGQFHIYLF Trigger: AAACAAGTAAATATGGAACTGGCCAAGATCAAGCAAAAATGCCCACTTTATGAAGCCAACGGACAAGCTGACACTGTCAAGGTTCCTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000400181.9 |
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| CDS CCA 90 bp | CCATGTTGCCTTCCTGTCTATGAATCCAGAGATCTACACAGGGCTTaGCCTTTATTCTCTTTTATAAATTCACAATATCCTTCCCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: PCCLPVYESRDLHRA*PLFSFINSQYPSLQ Trigger: TTGAAGGGAAGGATATTGTGAATTTATAAAAGAGAATAAAGGCCAAGCCCTGTGTAGATCTCTGGATTCATAGACAGGAAGGCAACATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS CCA 90 bp | TTCATCTTTCTCTTTAGGAACAGCTTGTCCGTTGGCTTCATAAAGTaGGCATTTTTGCTTGATCTTGGCCAGTTCCATATTTACTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: FIFLFRNSLSVGFIK*AFLLDLGQFHIYLF Trigger: AAACAAGTAAATATGGAACTGGCCAAGATCAAGCAAAAATGCCCACTTTATGAAGCCAACGGACAAGCTGTTCCTAAAGAGAAAGATGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000356634.7 ENST00000465864.2 |
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| CDS GCA 72 bp | GGCCCGACCTCGGCTGGGCCCGACAGGCCCGCGGGCTaGGCGGCCACCTCAGACCCGTTCTCGGAGCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: GPTSAGPDRPAG*AATSDPFSEPP Trigger: AGGCGGCTCCGAGAACGGGTCTGAGGTGGCCGCGCAGCCCGCGGGCCTGTCGGGCCCAGCCGAGGTCGGGCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS TCA 72 bp | GGGGTCGCAGACCCAGGCACGACAGTAGGGCCGGCCTaGGGCCCTGCGGACCCCGGCGGTTCCGCCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: GVADPGTTVGPA*GPADPGGSARP Trigger: GGGCCTGGCGGAACCGCCGGGGTCCGCAGGGCCTCAGGCCGGCCCTACTGTCGTGCCTGGGTCTGCGACCCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS CAA 72 bp | GCCGCTCGCTCTGTCGCTCCGTGGGTCCGAAAAGCCTaGCCTCGCCTCGCTTCACGCTGCCCGCGCGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: AARSVAPWVRKA*PRLASRCPRAA Trigger: GGCGGCGCGCGGGCAGCGTGAAGCGAGGCGAGGCAAGGCTTTTCGGACCCACGGAGCGACAGAGCGAGCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS CAA 90 bp | GCCGTAGGGGCCGCTCGCTCTGTCGCTCCGTGGGTCCGAAAAGCCTaGCCTCGCCTCGCTTCACGCTGCCCGCGCGCCGCCAACCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: AVGAARSVAPWVRKA*PRLASRCPRAANRR Trigger: ACGGCGGTTGGCGGCGCGCGGGCAGCGTGAAGCGAGGCGAGGCAAGGCTTTTCGGACCCACGGAGCGACAGAGCGAGCGGCCCCTACGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS GCA 72 bp | TGGGTCCGAAAAGCCTTGCCTCGCCTCGCTTCACGCTaGCCGCGCGCCGCCAACCGCCGTCGCGTACGCACG | + |
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Preference number: 6 (lower is better) Translates to: WVRKALPRLASR*PRAANRRRVRT Trigger: CGTGCGTACGCGACGGCGGTTGGCGGCGCGCGGGCAGCGTGAAGCGAGGCGAGGCAAGGCTTTTCGGACCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS GCA 72 bp | CCGCTCGCTCTGTCGCTCCGTGGGTCCGAAAAGCCTTaGCTCGCCTCGCTTCACGCTGCCCGCGCGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: PLALSLRGSEKP*LASLHAARAPP Trigger: TGGCGGCGCGCGGGCAGCGTGAAGCGAGGCGAGGCAAGGCTTTTCGGACCCACGGAGCGACAGAGCGAGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS CCA 72 bp | CCGACGGCCGTAGGGGCCGCTCGCTCTGTCGCTCCGTaGGTCCGAAAAGCCTTGCCTCGCCTCGCTTCACGC | + |
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Preference number: 6 (lower is better) Translates to: PTAVGAARSVAP*VRKALPRLASR Trigger: GCGTGAAGCGAGGCGAGGCAAGGCTTTTCGGACCCACGGAGCGACAGAGCGAGCGGCCCCTACGGCCGTCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS GCA 72 bp | CTTGCGCCGGCTGGTCCGACGCCCCTCCGGAGTCTCTaGTATTCCAGTTTCCATGGGGGTCGCAGACCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LAPAGPTPLRSL*YSSFHGGRRPR Trigger: CCTGGGTCTGCGACCCCCATGGAAACTGGAATAGCAGAGACTCCGGAGGGGCGTCGGACCAGCCGGCGCAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS CCA 72 bp | TCTCTCTGTACTCTACCTTCGCCCGCTTGCGCCGGCTaGTCCGACGCCCCTCCGGAGTCTCTGCTATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SLCTLPSPACAG*SDAPPESLLFQ Trigger: CTGGAATAGCAGAGACTCCGGAGGGGCGTCGGACCAGCCGGCGCAAGCGGGCGAAGGTAGAGTACAGAGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS CCA 72 bp | CCACTCAGGGAGAGGTGGCACAAACTGAACGGCTGGTaGCTGCTGCTTCAGCACACCCAGGGGAAGGGTACA | + |
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Preference number: 6 (lower is better) Translates to: PLRERWHKLNGW*LLLQHTQGKGT Trigger: TGTACCCTTCCCCTGGGTGTGCTGAAGCAGCAGCCACCAGCCGTTCAGTTTGTGCCACCTCTCCCTGAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS CCA 72 bp | GCCTGGCGAGGCAGCGTATACATGGCCCCCAAAAACTaGTCTGCAATTCTTCCCGCTTCTCGCAGCCCACTC | + |
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Preference number: 6 (lower is better) Translates to: AWRGSVYMAPKN*SAILPASRSPL Trigger: GAGTGGGCTGCGAGAAGCGGGAAGAATTGCAGACCAGTTTTTGGGGGCCATGTATACGCTGCCTCGCCAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 ENST00000602503.1 |
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| CDS CAA 90 bp | GGACATCATGAGATCCTGGCCTCTTCCCAAATAAGCCCAGATAGTTaGCCAGCTTCTCACCTGTGGGGCACCTGGAATCGAGGGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GHHEILASSQISPDS*PASHLWGTWNRGAR Trigger: CCTGGCCCCTCGATTCCAGGTGCCCCACAGGTGAGAAGCTGGCAAACTATCTGGGCTTATTTGGGAAGAGGCCAGGATCTCATGATGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS CCA 72 bp | CCTTTGGACTGCAGATGTTTTCCACTCAGGGAGAGGTaGCACAAACTGAACGGCTGGTGGCTGCTGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: PLDCRCFPLRER*HKLNGWWLLLQ Trigger: CTGAAGCAGCAGCCACCAGCCGTTCAGTTTGTGCCACCTCTCCCTGAGTGGAAAACATCTGCAGTCCAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS TCA 72 bp | TCGGCTGTGGGGCACCTGGAATCGAGGGGCCAGGAGTaGTTGGCTGAGCCATTAAATCATAGTCATTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SAVGHLESRGQE*LAEPLNHSHFQ Trigger: CTGGAAATGACTATGATTTAATGGCTCAGCCAATCACTCCTGGCCCCTCGATTCCAGGTGCCCCACAGCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS CAA 72 bp | GAGATCCTGGCCTCTTCCCAAATAAGCCCAGATAGTTaGCCAGCTTCTCACCTGTGGGGCACCTGGAATCGA | + |
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Preference number: 6 (lower is better) Translates to: EILASSQISPDS*PASHLWGTWNR Trigger: TCGATTCCAGGTGCCCCACAGGTGAGAAGCTGGCAAACTATCTGGGCTTATTTGGGAAGAGGCCAGGATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS GCA 72 bp | CCACCATGGCTCCAAGATCAGCTACATAGTTTCCTTTaGGAAATGTGGCAACTCGTCCACCCACACGATCCC | + |
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Preference number: 6 (lower is better) Translates to: PPWLQDQLHSFL*EMWQLVHPHDP Trigger: GGGATCGTGTGGGTGGACGAGTTGCCACATTTCGCAAAGGAAACTATGTAGCTGATCTTGGAGCCATGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS GCA 72 bp | CCCTCCTTGCCCCACCTACCTACTTACCTGAGGTACTaGACTGCTACCAAAAATCCCTTTGAGAATGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PSLPHLPTYLRY*TATKNPFENGQ Trigger: CTGGCCATTCTCAAAGGGATTTTTGGTAGCAGTGCAGTACCTCAGGTAAGTAGGTAGGTGGGGCAAGGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS TCA 72 bp | TGGGCTGAGGTACTGCACTGCTACCAAAAATCCCTTTaGGAATGGCCAGGCATCGGCCAACAATCACATCGT | + |
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Preference number: 6 (lower is better) Translates to: WAEVLHCYQKSL*EWPGIGQQSHR Trigger: ACGATGTGATTGTTGGCCGATGCCTGGCCATTCTCAAAGGGATTTTTGGTAGCAGTGCAGTACCTCAGCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS CCA 72 bp | GATCAGGGACACTTAAGCCTCGCAGCTCAGCAGGTCTaGGCTATGACACTAAGGAATTCTTACCGCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: DQGHLSLAAQQV*AMTLRNSYRSL Trigger: CAAAGAGCGGTAAGAATTCCTTAGTGTCATAGCCCAGACCTGCTGAGCTGCGAGGCTTAAGTGTCCCTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS CAA 90 bp | GGTCTGTTGTGGTCCACTGATAATATCTGGAAAACAGGCTGCTTCTaGAGAAGTCATCCGGTCATGAGGAAGTCGGCTCTGGAAAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: GLLWSTDNIWKTGCF*RSHPVMRKSALESC Trigger: GCAGCTTTCCAGAGCCGACTTCCTCATGACCGGATGACTTCTCAAGAAGCAGCCTGTTTTCCAGATATTATCAGTGGACCACAACAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS TCA 72 bp | CTCGTCCACCCACACGATCCCTGGCTTCCAAAAGTGTaGCATCCATTCCAAAACTTTGTAACTGTCGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LVHPHDPWLPKV*HPFQNFVTVEL Trigger: CAGCTCGACAGTTACAAAGTTTTGGAATGGATGTCACACTTTTGGAAGCCAGGGATCGTGTGGGTGGACGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS TCA 72 bp | TGCTGGCAGTCGTACTGCCAACATGCCCGAACAAATTaGCACTTGGATCCCAGAACACCCGATCAAAACACA | + |
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Preference number: 6 (lower is better) Translates to: CWQSYCQHARTN*HLDPRTPDQNT Trigger: TGTGTTTTGATCGGGTGTTCTGGGATCCAAGTGTCAATTTGTTCGGGCATGTTGGCAGTACGACTGCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS CCA 72 bp | AACACCACCTTGTTAAGGTTGCCAAATCCCATCCTTTaGACTGCAGATGTTTTCCACTCAGGGAGAGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: NTTLLRLPNPIL*TADVFHSGRGG Trigger: GCCACCTCTCCCTGAGTGGAAAACATCTGCAGTCCAAAGGATGGGATTTGGCAACCTTAACAAGGTGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS CAA 72 bp | CAACACCACCTTGTTAAGGTTGCCAAATCCCATCCTTaGGACTGCAGATGTTTTCCACTCAGGGAGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: QHHLVKVAKSHP*DCRCFPLRERW Trigger: CCACCTCTCCCTGAGTGGAAAACATCTGCAGTCCAAAGGATGGGATTTGGCAACCTTAACAAGGTGGTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS TCA 72 bp | TTACCTGAGGTACTGCACTGCTACCAAAAATCCCTTTaGGAATGGCCAGGCATCGGCCAACAATCACATCGT | + |
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Preference number: 6 (lower is better) Translates to: LPEVLHCYQKSL*EWPGIGQQSHR Trigger: ACGATGTGATTGTTGGCCGATGCCTGGCCATTCTCAAAGGGATTTTTGGTAGCAGTGCAGTACCTCAGGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS GCA 72 bp | CACCTTGTTAAGGTTGCCAAATCCCATCCTTTGGACTaGAGATGTTTTCCACTCAGGGAGAGGTGGCACAAA | + |
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Preference number: 6 (lower is better) Translates to: HLVKVAKSHPLD*RCFPLRERWHK Trigger: TTTGTGCCACCTCTCCCTGAGTGGAAAACATCTGCAGTCCAAAGGATGGGATTTGGCAACCTTAACAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS GCA 72 bp | AAAAGGACTTCAGACAGGAAGGATGCCCCTCCATGTTaGCTTCCTGTCTATGAATCCAGAGATCTACACAGG | + |
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Preference number: 6 (lower is better) Translates to: KRTSDRKDAPPC*LPVYESRDLHR Trigger: CCTGTGTAGATCTCTGGATTCATAGACAGGAAGGCAACATGGAGGGGCATCCTTCCTGTCTGAAGTCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS CCA 72 bp | AGTCGTACTGCCAACATGCCCGAACAAATTGACACTTaGATCCCAGAACACCCGATCAAAACACAACACCAC | + |
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Preference number: 6 (lower is better) Translates to: SRTANMPEQIDT*IPEHPIKTQHH Trigger: GTGGTGTTGTGTTTTGATCGGGTGTTCTGGGATCCAAGTGTCAATTTGTTCGGGCATGTTGGCAGTACGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS CAA 72 bp | TGGTCCACTGATAATATCTGGAAAACAGGCTGCTTCTaGAGAAGTCATCCGGTCATGAGGAAGTCGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: WSTDNIWKTGCF*RSHPVMRKSAL Trigger: CAGAGCCGACTTCCTCATGACCGGATGACTTCTCAAGAAGCAGCCTGTTTTCCAGATATTATCAGTGGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS CAA 90 bp | CAGGGGAAGGGTACAGAGAACTGCGTCGCATTTATAAATAAAGGTTaGACTCGTGGAGCGGGTATTCACAGCTATCACTTCACATCCTGC | + |
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Preference number: 6 (lower is better) Translates to: QGKGTENCVAFINKG*TRGAGIHSYHFTSC Trigger: GCAGGATGTGAAGTGATAGCTGTGAATACCCGCTCCACGAGTCAAACCTTTATTTATAAATGCGACGCAGTTCTCTGTACCCTTCCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494920.1 |
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| CDS CAA 90 bp | AGTGGGCATTTTTGCTTGATCTTGGCCAGTTCCATATTTACTTGTTaGCTGACCACAGCCATAGGATTCCCTCCAAGACCTGTTACCACC | + |
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Preference number: 6 (lower is better) Translates to: SGHFCLILASSIFTC*LTTAIGFPPRPVTT Trigger: GGTGGTAACAGGTCTTGGAGGGAATCCTATGGCTGTGGTCAGCAAACAAGTAAATATGGAACTGGCCAAGATCAAGCAAAAATGCCCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS CAA 90 bp | ATCAAAACACAACACCACCTTGTTAAGGTTGCCAAATCCCATCCTTaGGACTGCAGATGTTTTCCACTCAGGGAGAGGTGGCACAAACTG | + |
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Preference number: 6 (lower is better) Translates to: IKTQHHLVKVAKSHP*DCRCFPLRERWHKL Trigger: CAGTTTGTGCCACCTCTCCCTGAGTGGAAAACATCTGCAGTCCAAAGGATGGGATTTGGCAACCTTAACAAGGTGGTGTTGTGTTTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS TCA 72 bp | ACTTCCTTATCAGGCCCCACCTTATTCCTGGTGCTCTaGAATCTGATGACAAGACACACGCAGTACCATTCA | + |
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Preference number: 6 (lower is better) Translates to: TSLSGPTLFLVL*NLMTRHTQYHS Trigger: TGAATGGTACTGCGTGTGTCTTGTCATCAGATTTCAGAGCACCAGGAATAAGGTGGGGCCTGATAAGGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS CCA 72 bp | AACCTTCTGGGTCTGTTGTGGTCCACTGATAATATCTaGAAAACAGGCTGCTTCTTGAGAAGTCATCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: NLLGLLWSTDNI*KTGCFLRSHPV Trigger: GACCGGATGACTTCTCAAGAAGCAGCCTGTTTTCCAGATATTATCAGTGGACCACAACAGACCCAGAAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000481879.1 |
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| CDS TCA 72 bp | GTCATCATCCTGATCCCAGTGCTTAAGGGAGAGAGTTaGGAGAGGTGTGGCATTAGCAAATTCAAGATTTGC | + |
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Preference number: 6 (lower is better) Translates to: VIILIPVLKGES*ERCGISKFKIC Trigger: GCAAATCTTGAATTTGCTAATGCCACACCTCTCTCAACTCTCTCCCTTAAGCACTGGGATCAGGATGATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS CCA 72 bp | TGGAGTTTGGCCATTTTGTCTAAAATGTCAGGGATCTaGTGTGACTCTAAAGCCGGAGGAGAAATGCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: WSLAILSKMSGI*CDSKAGGEMQL Trigger: TAGCTGCATTTCTCCTCCGGCTTTAGAGTCACACCAGATCCCTGACATTTTAGACAAAATGGCCAAACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS CAA 90 bp | GCTAATTCATCATATTCCTTGCATAGGGCGGTCAGATCCCTGTGTTaGCTTTTCACTAAGAACTCGGCAGTAATATCTCTGGGTGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: ANSSYSLHRAVRSLC*LFTKNSAVISLGGF Trigger: AAAGCCACCCAGAGATATTACTGCCGAGTTCTTAGTGAAAAGCAAACACAGGGATCTGACCGCCCTATGCAAGGAATATGATGAATTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS CAA 90 bp | CTTGACAGTGTCAGCTTGTCCGTTGGCTTCATAAAGTGGGCATTTTaGCTTGATCTTGGCCAGTTCCATATTTACTTGTTTGCTGACCAC | + |
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Preference number: 6 (lower is better) Translates to: LDSVSLSVGFIKWAF*LDLGQFHIYLFADH Trigger: GTGGTCAGCAAACAAGTAAATATGGAACTGGCCAAGATCAAGCAAAAATGCCCACTTTATGAAGCCAACGGACAAGCTGACACTGTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400181.9 |
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| CDS CAA 72 bp | TTTTGCTTGATCTTGGCCAGTTCCATATTTACTTGTTaGCTGACCACAGCCATAGGATTCCCTCCAAGACCT | + |
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Preference number: 6 (lower is better) Translates to: FCLILASSIFTC*LTTAIGFPPRP Trigger: AGGTCTTGGAGGGAATCCTATGGCTGTGGTCAGCAAACAAGTAAATATGGAACTGGCCAAGATCAAGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS CAA 72 bp | TCATATTCCTTGCATAGGGCGGTCAGATCCCTGTGTTaGCTTTTCACTAAGAACTCGGCAGTAATATCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SYSLHRAVRSLC*LFTKNSAVISL Trigger: CAGAGATATTACTGCCGAGTTCTTAGTGAAAAGCAAACACAGGGATCTGACCGCCCTATGCAAGGAATATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS CAA 72 bp | GGTACAGAGAACTGCGTCGCATTTATAAATAAAGGTTaGACTCGTGGAGCGGGTATTCACAGCTATCACTTC | + |
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Preference number: 6 (lower is better) Translates to: GTENCVAFINKG*TRGAGIHSYHF Trigger: GAAGTGATAGCTGTGAATACCCGCTCCACGAGTCAAACCTTTATTTATAAATGCGACGCAGTTCTCTGTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000494920.1 |
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| CDS CAA 90 bp | ATAAAGTGGGCATTTTTGCTTGATCTTGGCCAGTTCCATATTTACTaGTTTGCTGACCACAGCCATAGGATTCCCTCCAAGACCTGTTAC | + |
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Preference number: 6 (lower is better) Translates to: IKWAFLLDLGQFHIY*FADHSHRIPSKTCY Trigger: GTAACAGGTCTTGGAGGGAATCCTATGGCTGTGGTCAGCAAACAAGTAAATATGGAACTGGCCAAGATCAAGCAAAAATGCCCACTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS CAA 90 bp | CTCTTTAGGAACAGCTTGTCCGTTGGCTTCATAAAGTGGGCATTTTaGCTTGATCTTGGCCAGTTCCATATTTACTTGTTTGCTGACCAC | + |
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Preference number: 6 (lower is better) Translates to: LFRNSLSVGFIKWAF*LDLGQFHIYLFADH Trigger: GTGGTCAGCAAACAAGTAAATATGGAACTGGCCAAGATCAAGCAAAAATGCCCACTTTATGAAGCCAACGGACAAGCTGTTCCTAAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356634.7 ENST00000465864.2 |
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| CDS TCA 72 bp | GCTTCTAATTGTTGGAGAGTAGCCTCAAATGTCAGCTaGATCTTTGGATTATCCAACCACAACTGCAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: ASNCWRVASNVS*IFGLSNHNCSV Trigger: CACACTGCAGTTGTGGTTGGATAATCCAAAGATTCAGCTGACATTTGAGGCTACTCTCCAACAATTAGAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 ENST00000481879.1 |
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| CDS CCA 72 bp | TCTCTTCTTCTGAATAATACTCATCTTCTGAGAGGTTaGCCAAGCTTTCATCCATCTCTCTGTACTCTACCT | + |
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Preference number: 6 (lower is better) Translates to: SLLLNNTHLLRG*PSFHPSLCTLP Trigger: AGGTAGAGTACAGAGAGATGGATGAAAGCTTGGCCAACCTCTCAGAAGATGAGTATTATTCAGAAGAAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS CAA 72 bp | GTCAGCTTGTCCGTTGGCTTCATAAAGTGGGCATTTTaGCTTGATCTTGGCCAGTTCCATATTTACTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: VSLSVGFIKWAF*LDLGQFHIYLF Trigger: AAACAAGTAAATATGGAACTGGCCAAGATCAAGCAAAAATGCCCACTTTATGAAGCCAACGGACAAGCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400181.9 |
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| CDS CAA 72 bp | AACAGCTTGTCCGTTGGCTTCATAAAGTGGGCATTTTaGCTTGATCTTGGCCAGTTCCATATTTACTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: NSLSVGFIKWAF*LDLGQFHIYLF Trigger: AAACAAGTAAATATGGAACTGGCCAAGATCAAGCAAAAATGCCCACTTTATGAAGCCAACGGACAAGCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356634.7 ENST00000465864.2 |
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| CDS TCA 72 bp | GAGACAATAAAACTCTACCTAGGCTCAGTCCTAAAGTaGTGCTTAACATGTGTTCTCATCAGTTTAGATACC | + |
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Preference number: 6 (lower is better) Translates to: ETIKLYLGSVLK*CLTCVLISLDT Trigger: GGTATCTAAACTGATGAGAACACATGTTAAGCATCACTTTAGGACTGAGCCTAGGTAGAGTTTTATTGTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS GCA 72 bp | CTCGGCAGTAATATCTCTGGGTGGCTTTACTTCAGATaGTTCTTTGTATTGCTGATGGAGTTCTTTAATTTT | + |
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Preference number: 6 (lower is better) Translates to: LGSNISGWLYFR*FFVLLMEFFNF Trigger: AAAATTAAAGAACTCCATCAGCAATACAAAGAAGCATCTGAAGTAAAGCCACCCAGAGATATTACTGCCGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356634.7 ENST00000400181.9 ENST00000465864.2 |
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| CDS CAA 72 bp | CTTTACTTTGGCACAGAATTCTTAACCTTGACTACCTaGGATAGCTCCATGACAATGACTACATCCCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: LYFGTEFLTLTT*DSSMTMTTSLL Trigger: TAAAAGGGATGTAGTCATTGTCATGGAGCTATCCAAGGTAGTCAAGGTTAAGAATTCTGTGCCAAAGTAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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| CDS GCA 72 bp | ACTTATACTCTGGACTCCTCCATTCTGAATGTAGACTaGCTAGATTTACAAAACCAAATTATGAGAAATCAG | + |
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Preference number: 6 (lower is better) Translates to: TYTLDSSILNVD*LDLQNQIMRNQ Trigger: CTGATTTCTCATAATTTGGTTTTGTAAATCTAGGCAGTCTACATTCAGAATGGAGGAGTCCAGAGTATAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602503.1 |
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