Pregenerated sensors for KDELR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000105438Ensembl transcript IDs: ENST00000330720.7, ENST00000594643.1, ENST00000597017.5, ENST00000599084.1, ENST00000600980.1
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGAGAACAAAGATTCAACCATCAGTTCTGTACAAAAACATGGTGTaGGAGCCATGGGATCCTCGGGCCAGCCCCCTTCCCGCACTTGAG | + |
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Preference number: 1 (lower is better) Translates to: KRTKIQPSVLYKNMV*EPWDPRASPLPALE Trigger: CTCAAGTGCGGGAAGGGGGCTGGCCCGAGGATCCCATGGCTCTCACACCATGTTTTTGTACAGAACTGATGGTTGAATCTTTGTTCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR CCA 90 bp | ATTTCAAGAGAACAAAGATTCAACCATCAGTTCTGTACAAAAACATaGTGTGAGAGCCATGGGATCCTCGGGCCAGCCCCCTTCCCGCAC | + |
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Preference number: 1 (lower is better) Translates to: ISREQRFNHQFCTKT*CESHGILGPAPFPH Trigger: GTGCGGGAAGGGGGCTGGCCCGAGGATCCCATGGCTCTCACACCATGTTTTTGTACAGAACTGATGGTTGAATCTTTGTTCTCTTGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR TCA 90 bp | AGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCCCTCCACTGTCCCCCTaGAACCCGGCAGGAGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: SGGRGSWPWQEVGQMGVGPPLSP*NPAGGG Trigger: CCCGCCTCCTGCCGGGTTTCAGGGGGACAGTGGAGG...GCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR GCA 90 bp | AGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCTCTGCCGCCTTCCTCTaGCTCCCGCTGCTGCCGAGG | + |
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Preference number: 2 (lower is better) Translates to: SGGRGSWPWQEVGQMGVGSAAFL*LPLLPR Trigger: CCTCGGCAGCAGCGGGAGGCAGAGGAAGGCGGCAGA...GCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR TCA 90 bp | TGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGCCTCCACTGTCCCCCTaGAACCCGGCAGGAGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: WQEVGQMGVGRFSVWQPVPPLSP*NPAGGG Trigger: CCCGCCTCCTGCCGGGTTTCAGGGGGACAGTGGAGG...CACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGCTGGGGGTGGGATCTaGGAGGGAGCCGAGGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: WQEVGQMGVGRFSVWQPVAGGGI*EGAEGP Trigger: AGGCCCCTCGGCTCCCTCCCAGATCCCACCCCCAGC...CACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR GCA 90 bp | CAATCTAGAAATTTAGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCTCTGCCGCCTTCCTCTaGCTCCCGCTGCTGCCGAGG | + |
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Preference number: 2 (lower is better) Translates to: QSRNLVGVAVHGHGRRWGSAAFL*LPLLPR Trigger: CCTCGGCAGCAGCGGGAGGCAGAGGAAGGCGGCAGA...GCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACTAAATTTCTAGATTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR GCA 90 bp | AGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCTCCTCTGCCTCCCGCTaGTGCCGAGGAGAGAGATGG | + |
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Preference number: 2 (lower is better) Translates to: RRWGRWVSADLVFGNQWGSSASR*CRGERW Trigger: CCATCTCTCTCCTCGGCAGCAGCGGGAGGCAGAGGA...GCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCGAGCTCCCCAAGACCTaGATCCTCCACTGTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: RRWGRWVSADLVFGNQWGELPKT*ILHCPP Trigger: AGGGGGACAGTGGAGGATCCAGGTCTTGGGGAGCTC...GCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR GCA 90 bp | CAATCTAGAAATTTAGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCTCTGCCTCCCGCTGCTaGCGAGGAGAGAGATGGAGA | + |
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Preference number: 2 (lower is better) Translates to: QSRNLVGVAVHGHGRRWGSASRC*RGERWR Trigger: TCTCCATCTCTCTCCTCGGCAGCAGCGGGAGGCAGA...GCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACTAAATTTCTAGATTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR CCA 90 bp | GGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTGAGCTCCCCAAGACCTaGATCCTCCACTGTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: GSWPWQEVGQMGVGRFSVELPKT*ILHCPP Trigger: AGGGGGACAGTGGAGGATCCAGGTCTTGGGGAGCTC...AACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR CCA 90 bp | CAATCTAGAAATTTAGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCGAAGGGAAAAGATCTTaGACCCTGCCCCGGCCCATA | + |
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Preference number: 2 (lower is better) Translates to: QSRNLVGVAVHGHGRRWGEGKRS*TLPRPI Trigger: TATGGGCCGGGGCAGGGTCCAAGATCTTTTCCCTTC...GCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACTAAATTTCTAGATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGAAGGGAAAAGATCTTaGACCCTGCCCCGGCCCATA | + |
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Preference number: 2 (lower is better) Translates to: WQEVGQMGVGRFSVWQPVEGKRS*TLPRPI Trigger: TATGGGCCGGGGCAGGGTCCAAGATCTTTTCCCTTC...CACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCAAAGTCACCCCTGGATaGGAAAGCTCTTCATCTTCT | + |
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Preference number: 2 (lower is better) Translates to: RRWGRWVSADLVFGNQWGKVTPG*ESSSSS Trigger: AGAAGATGAAGAGCTTTCCCATCCAGGGGTGACTTT...GCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR CCA 90 bp | ATTTCAAGAGAACAAAGATTCAACCATCAGTTCTGTACAAAAACATGGTGTGAGCGGCAGGAGGCGGGATaGGGAGCACAAGAGGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: ISREQRFNHQFCTKTWCERQEAG*GAQEVG Trigger: ACCCACCTCTTGTGCTCCCCATCCCGCCTCCTGCCG...CTCACACCATGTTTTTGTACAGAACTGATGGTTGAATCTTTGTTCTCTTGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGGCCTCCCTTTCTCCCTATCCCCAATCTAGAAATTTAGTGGGGGTCGCGACACTTTATAAAAATTaGGGCCACAGAGTAGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: SWASLSPYPQSRNLVGVATLYKN*GHRVEE Trigger: TTCTTCTACTCTGTGGCCCCAATTTTTATAAAGTGT...CGCGACCCCCACTAAATTTCTAGATTGGGGATAGGGAGAAAGGGAGGCCCAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR CCA 90 bp | ATTTCAAGAGAACAAAGATTCAACCATCAGTTCTGTACAAAAACATGGTGTGAGAGGAGGTGGGGCAGATaGGTGTCGGCAGATTTAGTG | + |
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Preference number: 2 (lower is better) Translates to: ISREQRFNHQFCTKTWCERRWGR*VSADLV Trigger: CACTAAATCTGCCGACACCCATCTGCCCCACCTCCT...CTCACACCATGTTTTTGTACAGAACTGATGGTTGAATCTTTGTTCTCTTGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR GCA 72 bp | GGATGGGAAAGCTCTTCATCTTCTGCCGCCTTCCTCTaGCTCCCGCTGCTGCCGAGGAGAGAGATGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: GWESSSSSAAFL*LPLLPRREMER Trigger: CCTCTCCATCTCTCTCCTCGGCAGCAGCGGGAGGCAGAGGAAGGCGGCAGAAGATGAAGAGCTTTCCCATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR CAA 90 bp | GGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTGGAAGGGAAAAGATCTaGGACCCTGCCCCGGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: GSWPWQEVGQMGVGRFSVGREKI*DPAPAH Trigger: ATGGGCCGGGGCAGGGTCCAAGATCTTTTCCCTTCC...AACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR CCA 72 bp | GAACAAAGATTCAACCATCAGTTCTGTACAAAAACATaGTGTGAGAGCCATGGGATCCTCGGGCCAGCCCCC | + |
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Preference number: 3 (lower is better) Translates to: EQRFNHQFCTKT*CESHGILGPAP Trigger: GGGGGCTGGCCCGAGGATCCCATGGCTCTCACACCATGTTTTTGTACAGAACTGATGGTTGAATCTTTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| 3UTR-3UTR CAA 90 bp | ATTTCAAGAGAACAAAGATTCAACCATCAGTTCTGTACAAAAACATGGTGTGAGGGAAGGGAAAAGATCTaGGACCCTGCCCCGGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: ISREQRFNHQFCTKTWCEGREKI*DPAPAH Trigger: ATGGGCCGGGGCAGGGTCCAAGATCTTTTCCCTTCC...CTCACACCATGTTTTTGTACAGAACTGATGGTTGAATCTTTGTTCTCTTGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR TCA 90 bp | GCCGCCTTCCTCTGCCTCCCGCTGCTGCCGAGGAGAGAGATGGAGAGGACCGGGCCGAGGCTGCTGGTCTaGACGGGTAGCTGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: AAFLCLPLLPRREMERTGPRLLV*TGSWAG Trigger: CCCAGCCCAGCTACCCGTTCAGACCAGCAGCCTCGG...CCCGGTCCTCTCCATCTCTCTCCTCGGCAGCAGCGGGAGGCAGAGGAAGGCGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330720.7 |
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| CDS-3UTR CCA 90 bp | AGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCGCTGGGGGTGGGATCTaGGAGGGAGCCGAGGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SGGRGSWPWQEVGQMGVGAGGGI*EGAEGP Trigger: AGGCCCCTCGGCTCCCTCCCAGATCCCACCCCCAGC...GCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR TCA 90 bp | AGCTCCCCAAGACCTGGATCCTCCACTGTCCCCCTGAAACCCGGCAGGAGGCGGCCTCCACTGTCCCCCTaGAACCCGGCAGGAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: SSPRPGSSTVPLKPGRRRPPLSP*NPAGGG Trigger: CCCGCCTCCTGCCGGGTTTCAGGGGGACAGTGGAGG...CCGCCTCCTGCCGGGTTTCAGGGGGACAGTGGAGGATCCAGGTCTTGGGGAGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR CCA 90 bp | AGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCCGGCAGGAGGCGGGATaGGGAGCACAAGAGGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SGGRGSWPWQEVGQMGVGRQEAG*GAQEVG Trigger: ACCCACCTCTTGTGCTCCCCATCCCGCCTCCTGCCG...GCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR CCA 90 bp | GCCGCCTTCCTCTGCCTCCCGCTGCTGCCGAGGAGAGAGATGGAGAGGACCGGGCGCGGTTCATGGCCATaGCAGGAGGTGGGGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: AAFLCLPLLPRREMERTGRGSWP*QEVGQM Trigger: CATCTGCCCCACCTCCTGCCATGGCCATGAACCGCG...CCCGGTCCTCTCCATCTCTCTCCTCGGCAGCAGCGGGAGGCAGAGGAAGGCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR CCA 90 bp | AGCTCCCCAAGACCTGGATCCTCCACTGTCCCCCTGAAACCCGGCAGGAGGCGGGGGGGTCGCGGTTCATaGCCATGGCAGGAGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SSPRPGSSTVPLKPGRRRGGRGS*PWQEVG Trigger: CCCCACCTCCTGCCATGGCCATGAACCGCGACCCCC...CCGCCTCCTGCCGGGTTTCAGGGGGACAGTGGAGGATCCAGGTCTTGGGGAGCT 68% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR GCA 90 bp | AGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCTCCTCTGCCTCCCGCTaGTGCCGAGGAGAGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: SGGRGSWPWQEVGQMGVGSSASR*CRGERW Trigger: CCATCTCTCTCCTCGGCAGCAGCGGGAGGCAGAGGA...GCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR CCA 90 bp | GCCGCCTTCCTCTGCCTCCCGCTGCTGCCGAGGAGAGAGATGGAGAGGACCGGGGAGCTCCCCAAGACCTaGATCCTCCACTGTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: AAFLCLPLLPRREMERTGELPKT*ILHCPP Trigger: AGGGGGACAGTGGAGGATCCAGGTCTTGGGGAGCTC...CCCGGTCCTCTCCATCTCTCTCCTCGGCAGCAGCGGGAGGCAGAGGAAGGCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR TCA 90 bp | TGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGCCAGCCCGCCCCGCCTaGGCAGGGCCCTTTCCCACG | + |
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Preference number: 4 (lower is better) Translates to: WQEVGQMGVGRFSVWQPVPARPA*AGPFPT Trigger: CGTGGGAAAGGGCCCTGCTCAGGCGGGGCGGGCTGG...CACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597017.5 |
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| CDS-3UTR GCA 90 bp | GCCGCCTTCCTCTGCCTCCCGCTGCTGCCGAGGAGAGAGATGGAGAGGACCGGGTGTCTGGACCAGGCCTaGCACAATGGCGATGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: AAFLCLPLLPRREMERTGCLDQA*HNGDEV Trigger: GACCTCATCGCCATTGTGGCAGGCCTGGTCCAGACA...CCCGGTCCTCTCCATCTCTCTCCTCGGCAGCAGCGGGAGGCAGAGGAAGGCGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR TCA 90 bp | AGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCCGGTCTTGCTCACCATaGACAGCTGCGGCAAGATGG | + |
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Preference number: 4 (lower is better) Translates to: SGGRGSWPWQEVGQMGVGRSCSP*TAAARW Trigger: CCATCTTGCCGCAGCTGTTCATGGTGAGCAAGACCG...GCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR GCA 90 bp | TGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCTGGGGGAAGAGGGACCCTAGGTaGGCTCCGCTCCGGGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: WGRWVSADLVFGNQWGWGKRDPR*APLRGG Trigger: CCCTCCCCGGAGCGGAGCGCACCTAGGGTCCCTCTT...CCCCCAGCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000330720.7 |
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| CDS-3UTR GCA 90 bp | TGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCTGGGGGTCTGCCGCCTTCCTCTaGCTCCCGCTGCTGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: WGRWVSADLVFGNQWGWGSAAFL*LPLLPR Trigger: CCTCGGCAGCAGCGGGAGGCAGAGGAAGGCGGCAGA...CCCCCAGCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR CCA 90 bp | GCCGCCTTCCTCTGCCTCCCGCTGCTGCCGAGGAGAGAGATGGAGAGGACCGGGATCGGAAGAGATTCATaGCTGGGGAACCCTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AAFLCLPLLPRREMERTGIGRDS*LGNPGR Trigger: CCTGCCAGGGTTCCCCAGCCATGAATCTCTTCCGAT...CCCGGTCCTCTCCATCTCTCTCCTCGGCAGCAGCGGGAGGCAGAGGAAGGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330720.7 |
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| CDS-3UTR CCA 90 bp | AGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCCCAGGAACGCCAGAATaGCTGTGGGAACGACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SGGRGSWPWQEVGQMGVGPGTPE*LWERPG Trigger: TCCTGGTCGTTCCCACAGCCATTCTGGCGTTCCTGG...GCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR CCA 90 bp | GCCGCCTTCCTCTGCCTCCCGCTGCTGCCGAGGAGAGAGATGGAGAGGACCGGGGAAGGGAAAAGATCTTaGACCCTGCCCCGGCCCATA | + |
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Preference number: 4 (lower is better) Translates to: AAFLCLPLLPRREMERTGEGKRS*TLPRPI Trigger: TATGGGCCGGGGCAGGGTCCAAGATCTTTTCCCTTC...CCCGGTCCTCTCCATCTCTCTCCTCGGCAGCAGCGGGAGGCAGAGGAAGGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR CCA 90 bp | GCCGCCTTCCTCTGCCTCCCGCTGCTGCCGAGGAGAGAGATGGAGAGGACCGGGGGCAGATTTAGTGTTTaGCAACCAGTGGGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: AAFLCLPLLPRREMERTGGRFSV*QPVGLG Trigger: CCCCAGCCCCACTGGTTGCCAAACACTAAATCTGCC...CCCGGTCCTCTCCATCTCTCTCCTCGGCAGCAGCGGGAGGCAGAGGAAGGCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR CCA 90 bp | TGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCTGGGGGCCTCATGGCTACCCCTaGCCCCTCAGGGTCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: WGRWVSADLVFGNQWGWGPHGYP*PLRVLP Trigger: CGGGAGGACCCTGAGGGGCCAGGGGTAGCCATGAGG...CCCCCAGCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000597017.5 |
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| CDS-3UTR CCA 90 bp | AGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCAGGGGGAGCAAAGGCTaGAGCTGGCGGCGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RRWGRWVSADLVFGNQWGRGSKG*SWRRSW Trigger: CCAGCTCCGCCGCCAGCTCCAGCCTTTGCTCCCCCT...GCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330720.7 |
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| CDS-3UTR CCA 90 bp | AGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCACGCCAGAATGGCTGTaGGAACGACCAGGAACTCCA | + |
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Preference number: 4 (lower is better) Translates to: SGGRGSWPWQEVGQMGVGTPEWL*ERPGTP Trigger: TGGAGTTCCTGGTCGTTCCCACAGCCATTCTGGCGT...GCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR CCA 90 bp | CAATCTAGAAATTTAGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCGCTGGGGGTGGGATCTaGGAGGGAGCCGAGGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QSRNLVGVAVHGHGRRWGAGGGI*EGAEGP Trigger: AGGCCCCTCGGCTCCCTCCCAGATCCCACCCCCAGC...GCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACTAAATTTCTAGATTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR TCA 90 bp | AGCTCCCCAAGACCTGGATCCTCCACTGTCCCCCTGAAACCCGGCAGGAGGCGGAGCGCCAGATCCAGTTaGAGAGATAGAGCGTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: SSPRPGSSTVPLKPGRRRSARSS*RDRACG Trigger: ACCGCACGCTCTATCTCTTCAACTGGATCTGGCGCT...CCGCCTCCTGCCGGGTTTCAGGGGGACAGTGGAGGATCCAGGTCTTGGGGAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR CCA 90 bp | TGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGAGCAAAGGCTGGAGCTaGCGGCGGAGCTGGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: WQEVGQMGVGRFSVWQPVSKGWS*RRSWSR Trigger: CCGGCTCCAGCTCCGCCGCCAGCTCCAGCCTTTGCT...CACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330720.7 |
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| CDS-3UTR CCA 90 bp | AGCTCCCCAAGACCTGGATCCTCCACTGTCCCCCTGAAACCCGGCAGGAGGCGGATGATGGCGAGGAGGTaGGAGAGGTCTCCCAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: SSPRPGSSTVPLKPGRRRMMARR*ERSPRN Trigger: ATTCCTGGGAGACCTCTCCCACCTCCTCGCCATCAT...CCGCCTCCTGCCGGGTTTCAGGGGGACAGTGGAGGATCCAGGTCTTGGGGAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330720.7 |
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| CDS-3UTR CCA 90 bp | GGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTGGGGGTCGCGGTTCATaGCCATGGCAGGAGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSWPWQEVGQMGVGRFSVGGRGS*PWQEVG Trigger: CCCCACCTCCTGCCATGGCCATGAACCGCGACCCCC...AACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | GGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTCGCCCGGGACCAGCCTaGAGGCAGCTCTGGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSWPWQEVGQMGVGRFSVRPGPA*RQLWSA Trigger: TGCACTCCAGAGCTGCCTCCAGGCTGGTCCCGGGCG...AACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | AGCTCCCCAAGACCTGGATCCTCCACTGTCCCCCTGAAACCCGGCAGGAGGCGGTCAACCAGACCGTGGTaGAGGAGCAGGCTATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSPRPGSSTVPLKPGRRRSTRPW*RSRLCR Trigger: TCTACATAGCCTGCTCCTTCACCACGGTCTGGTTGA...CCGCCTCCTGCCGGGTTTCAGGGGGACAGTGGAGGATCCAGGTCTTGGGGAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR GCA 90 bp | GGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTGAGGCAGCTCTGGAGTaGAGCTGTCCCCGGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSWPWQEVGQMGVGRFSVEAALE*SCPRRP Trigger: AGGCCTCCGGGGACAGCTGCACTCCAGAGCTGCCTC...AACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | TGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGACCTGGCTCTTCCCTaGAATTCCGGCGCACGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: WQEVGQMGVGRFSVWQPVDLALP*NSGARA Trigger: CGCTCGTGCGCCGGAATTTCAGGGAAGAGCCAGGTC...CACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330720.7 |
||
| CDS-3UTR TCA 90 bp | AGCTCCCCAAGACCTGGATCCTCCACTGTCCCCCTGAAACCCGGCAGGAGGCGGGTGAGATGTAGTTGGTaGAGAGGTCCAGATATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPRPGSSTVPLKPGRRRVRCSW*RGPDIG Trigger: CCCGATATCTGGACCTCTTCACCAACTACATCTCAC...CCGCCTCCTGCCGGGTTTCAGGGGGACAGTGGAGGATCCAGGTCTTGGGGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | TGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGACAAGTAGTGGCTGGTaGTGGTCTCCGCCTCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: WQEVGQMGVGRFSVWQPVTSSGW*WSPPRR Trigger: CCGGCGAGGCGGAGACCATCACCAGCCACTACTTGT...CACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | GGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTACAAGTAGTGGCTGGTaGTGGTCTCCGCCTCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GSWPWQEVGQMGVGRFSVTSSGW*WSPPRR Trigger: CCGGCGAGGCGGAGACCATCACCAGCCACTACTTGT...AACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR GCA 90 bp | TGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCTGGGGGTGTCTGGACCAGGCCTaGCACAATGGCGATGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WGRWVSADLVFGNQWGWGCLDQA*HNGDEV Trigger: GACCTCATCGCCATTGTGGCAGGCCTGGTCCAGACA...CCCCCAGCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | TGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCTGGGGGGAAGAGATTCATGGCTaGGGAACCCTGGCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WGRWVSADLVFGNQWGWGEEIHG*GTLAGL Trigger: CAGCCCTGCCAGGGTTCCCCAGCCATGAATCTCTTC...CCCCCAGCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000330720.7 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGCCTCCCTTTCTCCCTATCCCCAATCTAGAAATTTAGTGGGGGTCGCGCGGCAGGAGGCGGGATaGGGAGCACAAGAGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SWASLSPYPQSRNLVGVARQEAG*GAQEVG Trigger: ACCCACCTCTTGTGCTCCCCATCCCGCCTCCTGCCG...CGCGACCCCCACTAAATTTCTAGATTGGGGATAGGGAGAAAGGGAGGCCCAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGCGCGGTTCATGGCCATaGCAGGAGGTGGGGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: WQEVGQMGVGRFSVWQPVRGSWP*QEVGQM Trigger: CATCTGCCCCACCTCCTGCCATGGCCATGAACCGCG...CACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | AGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCACACGTGTTGTAGAGTaGGATGTAGTTGGTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGGRGSWPWQEVGQMGVGTRVVE*DVVGEE Trigger: CTCTTCACCAACTACATCTCACTCTACAACACGTGT...GCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | AGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCCGGTCTTGCTCACCATaGACAGCTGCGGCAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: RRWGRWVSADLVFGNQWGRSCSP*TAAARW Trigger: CCATCTTGCCGCAGCTGTTCATGGTGAGCAAGACCG...GCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | AGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCCTGCCACAATGGCGATaGGGTCGAAGAAGCCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RRWGRWVSADLVFGNQWGLPQWR*GRRSPR Trigger: TCGAGGGCTTCTTCGACCTCATCGCCATTGTGGCAG...GCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR GCA 90 bp | GGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTCTGCCTCCCGCTGCTaGCGAGGAGAGAGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSWPWQEVGQMGVGRFSVSASRC*RGERWR Trigger: TCTCCATCTCTCTCCTCGGCAGCAGCGGGAGGCAGA...AACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | AGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCCCAGGAACGCCAGAATaGCTGTGGGAACGACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRWGRWVSADLVFGNQWGPGTPE*LWERPG Trigger: TCCTGGTCGTTCCCACAGCCATTCTGGCGTTCCTGG...GCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | CAATCTAGAAATTTAGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCTGCCGAGGAGAGAGATaGAGAGGACCGGGGCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: QSRNLVGVAVHGHGRRWGCRGER*RGPGLC Trigger: GCATAGCCCCGGTCCTCTCCATCTCTCTCCTCGGCA...GCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACTAAATTTCTAGATTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | TGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCTGGGGGGGCAGATTTAGTGTTTaGCAACCAGTGGGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WGRWVSADLVFGNQWGWGGRFSV*QPVGLG Trigger: CCCCAGCCCCACTGGTTGCCAAACACTAAATCTGCC...CCCCCAGCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCA 59% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | AGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCAGCGCCAGATCCAGTTaGAGAGATAGAGCGTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRWGRWVSADLVFGNQWGSARSS*RDRACG Trigger: ACCGCACGCTCTATCTCTTCAACTGGATCTGGCGCT...GCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | GGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTCTGCCACAATGGCGATaGGGTCGAAGAAGCCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GSWPWQEVGQMGVGRFSVLPQWR*GRRSPR Trigger: TCGAGGGCTTCTTCGACCTCATCGCCATTGTGGCAG...AACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGCCTCCCTTTCTCCCTATCCCCAATCTAGAAATTTAGTGGGGGTCGCGTGCCGAGGAGAGAGATaGAGAGGACCGGGGCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: SWASLSPYPQSRNLVGVACRGER*RGPGLC Trigger: GCATAGCCCCGGTCCTCTCCATCTCTCTCCTCGGCA...CGCGACCCCCACTAAATTTCTAGATTGGGGATAGGGAGAAAGGGAGGCCCAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGCCTCCCTTTCTCCCTATCCCCAATCTAGAAATTTAGTGGGGGTCGCGGAGCTCCCCAAGACCTaGATCCTCCACTGTCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SWASLSPYPQSRNLVGVAELPKT*ILHCPP Trigger: AGGGGGACAGTGGAGGATCCAGGTCTTGGGGAGCTC...CGCGACCCCCACTAAATTTCTAGATTGGGGATAGGGAGAAAGGGAGGCCCAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | AGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCTCAACCAGACCGTGGTaGAGGAGCAGGCTATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRWGRWVSADLVFGNQWGSTRPW*RSRLCR Trigger: TCTACATAGCCTGCTCCTTCACCACGGTCTGGTTGA...GCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | AGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCAGAGGGGTGAAGTCATaGTTGACCAGGAACGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRWGRWVSADLVFGNQWGRGVKS*LTRNAR Trigger: TCTGGCGTTCCTGGTCAATCATGACTTCACCCCTCT...GCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | GGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTGACCTGGCTCTTCCCTaGAATTCCTGTGGTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSWPWQEVGQMGVGRFSVDLALP*NSCGPE Trigger: CTCTGGACCACAGGAATTTCAGGGAAGAGCCAGGTC...AACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGACGCCAGAATGGCTGTaGGAACGACCAGGAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WQEVGQMGVGRFSVWQPVTPEWL*ERPGTP Trigger: TGGAGTTCCTGGTCGTTCCCACAGCCATTCTGGCGT...CACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGAGGAGGTGGGGCAGATaGGTGTCGGCAGATTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WQEVGQMGVGRFSVWQPVRRWGR*VSADLV Trigger: CACTAAATCTGCCGACACCCATCTGCCCCACCTCCT...CACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | CAATCTAGAAATTTAGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCCCAGATATCGGGCAGTaGACACCACAGCAAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSRNLVGVAVHGHGRRWGPDIGQ*TPQQTG Trigger: TCCTGTTTGCTGTGGTGTTCACTGCCCGATATCTGG...GCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACTAAATTTCTAGATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | CAATCTAGAAATTTAGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCAGAGGGGTGAAGTCATaGTTGACCAGGAACGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSRNLVGVAVHGHGRRWGRGVKS*LTRNAR Trigger: TCTGGCGTTCCTGGTCAATCATGACTTCACCCCTCT...GCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACTAAATTTCTAGATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR GCA 90 bp | CAATCTAGAAATTTAGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCAGAGGACCGGGGCTATaGCGGCAAACTCAACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSRNLVGVAVHGHGRRWGRGPGL*RQTQLL Trigger: AAGAAGTTGAGTTTGCCGGCATAGCCCCGGTCCTCT...GCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACTAAATTTCTAGATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGAGAGGACCGGGGCTATaGCGGCAAACTCAACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WQEVGQMGVGRFSVWQPVRGPGL*RQTQLL Trigger: AAGAAGTTGAGTTTGCCGGCATAGCCCCGGTCCTCT...CACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGCCTCCCTTTCTCCCTATCCCCAATCTAGAAATTTAGTGGGGGTCGCGGAAGGGAAAAGATCTTaGACCCTGCCCCGGCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: SWASLSPYPQSRNLVGVAEGKRS*TLPRPI Trigger: TATGGGCCGGGGCAGGGTCCAAGATCTTTTCCCTTC...CGCGACCCCCACTAAATTTCTAGATTGGGGATAGGGAGAAAGGGAGGCCCAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGCCTCCCTTTCTCCCTATCCCCAATCTAGAAATTTAGTGGGGGTCGCGAGAGGAAGCTGGGGGTaGGCTGCATGGGCAATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SWASLSPYPQSRNLVGVARGSWG*AAWAIN Trigger: GTTTATTGCCCATGCAGCCCACCCCCAGCTTCCTCT...CGCGACCCCCACTAAATTTCTAGATTGGGGATAGGGAGAAAGGGAGGCCCAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | TGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGTGAGATGTAGTTGGTaGAGAGGTCCAGATATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WQEVGQMGVGRFSVWQPVVRCSW*RGPDIG Trigger: CCCGATATCTGGACCTCTTCACCAACTACATCTCAC...CACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | AGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCACACTTTATAAAAATTaGGGCCACAGAGTAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGGRGSWPWQEVGQMGVGTLYKN*GHRVEE Trigger: TTCTTCTACTCTGTGGCCCCAATTTTTATAAAGTGT...GCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | CAATCTAGAAATTTAGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCAAAGTCACCCCTGGATaGGAAAGCTCTTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSRNLVGVAVHGHGRRWGKVTPG*ESSSSS Trigger: AGAAGATGAAGAGCTTTCCCATCCAGGGGTGACTTT...GCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACTAAATTTCTAGATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | GGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTCCCTGAAATTCCTGTaGTCCAGAGACAGAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSWPWQEVGQMGVGRFSVSLKFL*SRDRER Trigger: TCTTTCTCTGTCTCTGGACCACAGGAATTTCAGGGA...AACACTAAATCTGCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | TGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCTGGGGGCCTTTAGGACTTTGGTaGTATAGAGGTAGAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: WGRWVSADLVFGNQWGWGPLGLW*YRGRRN Trigger: ATTTCTTCTACCTCTATATCACCAAAGTCCTAAAGG...CCCCCAGCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGCCTCCCTTTCTCCCTATCCCCAATCTAGAAATTTAGTGGGGGTCGCGAAAGTCACCCCTGGATaGGAAAGCTCTTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SWASLSPYPQSRNLVGVAKVTPG*ESSSSS Trigger: AGAAGATGAAGAGCTTTCCCATCCAGGGGTGACTTT...CGCGACCCCCACTAAATTTCTAGATTGGGGATAGGGAGAAAGGGAGGCCCAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGCCTCCCTTTCTCCCTATCCCCAATCTAGAAATTTAGTGGGGGTCGCGTTCTGTACAAAAACATaGTGTGAGAGCCATGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SWASLSPYPQSRNLVGVAFCTKT*CESHGI Trigger: GATCCCATGGCTCTCACACCATGTTTTTGTACAGAA...CGCGACCCCCACTAAATTTCTAGATTGGGGATAGGGAGAAAGGGAGGCCCAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | AGGAGGTGGGGCAGATGGGTGTCGGCAGATTTAGTGTTTGGCAACCAGTGGGGCACACTTTATAAAAATTaGGGCCACAGAGTAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRWGRWVSADLVFGNQWGTLYKN*GHRVEE Trigger: TTCTTCTACTCTGTGGCCCCAATTTTTATAAAGTGT...GCCCCACTGGTTGCCAAACACTAAATCTGCCGACACCCATCTGCCCCACCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | TCCTGGGCCTCCCTTTCTCCCTATCCCCAATCTAGAAATTTAGTGGGGGTCGCGCCTTTAGGACTTTGGTaGTATAGAGGTAGAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SWASLSPYPQSRNLVGVAPLGLW*YRGRRN Trigger: ATTTCTTCTACCTCTATATCACCAAAGTCCTAAAGG...CGCGACCCCCACTAAATTTCTAGATTGGGGATAGGGAGAAAGGGAGGCCCAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR TCA 90 bp | ATTTCAAGAGAACAAAGATTCAACCATCAGTTCTGTACAAAAACATGGTGTGAGACACGTGTTGTAGAGTaGGATGTAGTTGGTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISREQRFNHQFCTKTWCETRVVE*DVVGEE Trigger: CTCTTCACCAACTACATCTCACTCTACAACACGTGT...CTCACACCATGTTTTTGTACAGAACTGATGGTTGAATCTTTGTTCTCTTGAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
||
| CDS-3UTR CCA 90 bp | ATTTCAAGAGAACAAAGATTCAACCATCAGTTCTGTACAAAAACATGGTGTGAGTTCTGTACAAAAACATaGTGTGAGAGCCATGGGATC | + |
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Preference number: 4 (lower is better) Translates to: ISREQRFNHQFCTKTWCEFCTKT*CESHGI Trigger: GATCCCATGGCTCTCACACCATGTTTTTGTACAGAA...CTCACACCATGTTTTTGTACAGAACTGATGGTTGAATCTTTGTTCTCTTGAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR CAA 90 bp | AGTGGGGGTCGCGGTTCATGGCCATGGCAGGAGGTGGGGCAGATGGGTGTCGGCTCCGCCTCGCCGGTCTaGCTCACCATGAACAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SGGRGSWPWQEVGQMGVGSASPV*LTMNSC Trigger: GCAGCTGTTCATGGTGAGCAAGACCGGCGAGGCGGA...GCCGACACCCATCTGCCCCACCTCCTGCCATGGCCATGAACCGCGACCCCCACT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS GCA 90 bp | GTCACCCCTGGATGGGAAAGCTCTTCATCTTCTGCCGCCTTCCTCTaGCTCCCGCTGCTGCCGAGGAGAGAGATGGAGAGGACCGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: VTPGWESSSSSAAFL*LPLLPRREMERTGA Trigger: AGCCCCGGTCCTCTCCATCTCTCTCCTCGGCAGCAGCGGGAGGCAGAGGAAGGCGGCAGAAGATGAAGAGCTTTCCCATCCAGGGGTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS CCA 90 bp | TCAGACCTAGGAGTCTGGGACCCACACCCGGCTCCTCTGCCTCAGTaGGGGCCAGAGAGGTGGGGTGGAGCCTCTACCTTCATACACGTG | + |
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Preference number: 5 (lower is better) Translates to: SDLGVWDPHPAPLPQ*GPERWGGASTFIHV Trigger: CACGTGTATGAAGGTAGAGGCTCCACCCCACCTCTCTGGCCCCCACTGAGGCAGAGGAGCCGGGTGTGGGTCCCAGACTCCTAGGTCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594643.1 |
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| CDS CCA 90 bp | CTTCTGCCGCCTTCCTCTGCCTCCCGCTGCTGCCGAGGAGAGAGATaGAGAGGACCGGGGCTATGCCGGCAAACTCAACTTCTTCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: LLPPSSASRCCRGER*RGPGLCRQTQLLPL Trigger: AAGGGGAAGAAGTTGAGTTTGCCGGCATAGCCCCGGTCCTCTCCATCTCTCTCCTCGGCAGCAGCGGGAGGCAGAGGAAGGCGGCAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR CAA 90 bp | GCCGCCTTCCTCTGCCTCCCGCTGCTGCCGAGGAGAGAGATGGAGAGGACCGGGCGGGACTTCCAGATTTaGAGCAGTAGCAAGATGATG | + |
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Preference number: 5 (lower is better) Translates to: AAFLCLPLLPRREMERTGRDFQI*SSSKMM Trigger: CATCATCTTGCTACTGCTCAAAATCTGGAAGTCCCG...CCCGGTCCTCTCCATCTCTCTCCTCGGCAGCAGCGGGAGGCAGAGGAAGGCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330720.7 |
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| CDS-3UTR CAA 90 bp | TCCTGGGCCTCCCTTTCTCCCTATCCCCAATCTAGAAATTTAGTGGGGGTCGCGTCCGCCTCGCCGGTCTaGCTCACCATGAACAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SWASLSPYPQSRNLVGVASASPV*LTMNSC Trigger: GCAGCTGTTCATGGTGAGCAAGACCGGCGAGGCGGA...CGCGACCCCCACTAAATTTCTAGATTGGGGATAGGGAGAAAGGGAGGCCCAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS-3UTR CAA 90 bp | TCCTGGGCCTCCCTTTCTCCCTATCCCCAATCTAGAAATTTAGTGGGGGTCGCGGGAAGGGAAAAGATCTaGGACCCTGCCCCGGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: SWASLSPYPQSRNLVGVAGREKI*DPAPAH Trigger: ATGGGCCGGGGCAGGGTCCAAGATCTTTTCCCTTCC...CGCGACCCCCACTAAATTTCTAGATTGGGGATAGGGAGAAAGGGAGGCCCAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS CCA 90 bp | CGGGACTTCCAGATTTTGAGCAGTAGCAAGATGATGGCGAGGAGGTaGGAGAGGTCTCCCAGGAATCGGAAGAGATTCATGGCTGGGGAA | + |
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Preference number: 5 (lower is better) Translates to: RDFQILSSSKMMARR*ERSPRNRKRFMAGE Trigger: TTCCCCAGCCATGAATCTCTTCCGATTCCTGGGAGACCTCTCCCACCTCCTCGCCATCATCTTGCTACTGCTCAAAATCTGGAAGTCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000330720.7 ENST00000594643.1 ENST00000599084.1 ENST00000600980.1 |
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| CDS TCA 90 bp | AGAGAGGTGGGGTGGAGCCTCTACCTTCATACACGTGTTGTAGAGTaGGATGTAGTTGGTGAAGAGGTCCAGATATCGGGCAGTGAACAC | + |
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Preference number: 5 (lower is better) Translates to: REVGWSLYLHTRVVE*DVVGEEVQISGSEH Trigger: GTGTTCACTGCCCGATATCTGGACCTCTTCACCAACTACATCTCACTCTACAACACGTGTATGAAGGTAGAGGCTCCACCCCACCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594643.1 |
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| CDS CCA 72 bp | CCTTCCTCTGCCTCCCGCTGCTGCCGAGGAGAGAGATaGAGAGGACCGGGGCTATGCCGGCAAACTCAACTT | + |
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Preference number: 6 (lower is better) Translates to: PSSASRCCRGER*RGPGLCRQTQL Trigger: AAGTTGAGTTTGCCGGCATAGCCCCGGTCCTCTCCATCTCTCTCCTCGGCAGCAGCGGGAGGCAGAGGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330720.7 ENST00000597017.5 |
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| CDS CAA 90 bp | TGGCTCTTCCCTGAAATTCCGGCGCACGAGCGGGACTTCCAGATTTaGAGCAGTAGCAAGATGATGGCGAGGAGGTGGGAGAGGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: WLFPEIPAHERDFQI*SSSKMMARRWERSP Trigger: GGGAGACCTCTCCCACCTCCTCGCCATCATCTTGCTACTGCTCAAAATCTGGAAGTCCCGCTCGTGCGCCGGAATTTCAGGGAAGAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000330720.7 ENST00000594643.1 ENST00000599084.1 ENST00000600980.1 |
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| CDS TCA 72 bp | CACAGCAAGGCGCCTACCTCCAGAGGGGTGAAGTCATaGTTGACCAGGAACGCCAGAATGGCTGTGGGAACG | + |
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Preference number: 6 (lower is better) Translates to: HSKAPTSRGVKS*LTRNARMAVGT Trigger: CGTTCCCACAGCCATTCTGGCGTTCCTGGTCAATCATGACTTCACCCCTCTGGAGGTAGGCGCCTTGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599084.1 |
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| CDS TCA 72 bp | CACCCAGGCCTATCTTCCTCCAGAGGGGTGAAGTCATaGTTGACCAGGAACGCCAGAATGGCTGTGGGAACG | + |
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Preference number: 6 (lower is better) Translates to: HPGLSSSRGVKS*LTRNARMAVGT Trigger: CGTTCCCACAGCCATTCTGGCGTTCCTGGTCAATCATGACTTCACCCCTCTGGAGGAAGATAGGCCTGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600980.1 |
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| CDS CAA 72 bp | CCTGAAATTCCGGCGCACGAGCGGGACTTCCAGATTTaGAGCAGTAGCAAGATGATGGCGAGGAGGTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: PEIPAHERDFQI*SSSKMMARRWE Trigger: CTCCCACCTCCTCGCCATCATCTTGCTACTGCTCAAAATCTGGAAGTCCCGCTCGTGCGCCGGAATTTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000330720.7 ENST00000594643.1 ENST00000599084.1 ENST00000600980.1 |
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| CDS TCA 72 bp | GGGTGGAGCCTCTACCTTCATACACGTGTTGTAGAGTaGGATGTAGTTGGTGAAGAGGTCCAGATATCGGGC | + |
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Preference number: 6 (lower is better) Translates to: GWSLYLHTRVVE*DVVGEEVQISG Trigger: GCCCGATATCTGGACCTCTTCACCAACTACATCTCACTCTACAACACGTGTATGAAGGTAGAGGCTCCACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594643.1 |
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| CDS CCA 72 bp | CAGATTTTGAGCAGTAGCAAGATGATGGCGAGGAGGTaGGAGAGGTCTCCCAGGAATCGGAAGAGATTCATG | + |
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Preference number: 6 (lower is better) Translates to: QILSSSKMMARR*ERSPRNRKRFM Trigger: CATGAATCTCTTCCGATTCCTGGGAGACCTCTCCCACCTCCTCGCCATCATCTTGCTACTGCTCAAAATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000330720.7 ENST00000594643.1 ENST00000599084.1 ENST00000600980.1 |
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| CDS TCA 72 bp | GGCTATGTAGACCACCTTCATACACGTGTTGTAGAGTaGGATGTAGTTGGTGAAGAGGTCCAGATATCGGGC | + |
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Preference number: 6 (lower is better) Translates to: GYVDHLHTRVVE*DVVGEEVQISG Trigger: GCCCGATATCTGGACCTCTTCACCAACTACATCTCACTCTACAACACGTGTATGAAGGTGGTCTACATAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000330720.7 ENST00000597017.5 ENST00000599084.1 ENST00000600980.1 |
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