Pregenerated sensors for KCTD8 (Homo sapiens)
Ensembl gene IDs: ENSG00000183783Ensembl transcript IDs: ENST00000360029.4, ENST00000515268.1
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCACATCCACTGTTCACAACAAGGAAGAGCAGCAAGAATCACACTaGCCATTGTTAGGACATCAGTCAGGTGGTGACACTGTAGTAAAC | + |
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Preference number: 1 (lower is better) Translates to: PTSTVHNKEEQQESH*PLLGHQSGGDTVVN Trigger: GTTTACTACAGTGTCACCACCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTGTGAACAGTGGATGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| 3UTR-3UTR TCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGACAAACATATCCAGTTaGCCAGAGTTCAAAAACCAA | + |
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Preference number: 2 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMTNISS*PEFKNQ Trigger: TTGGTTTTTGAACTCTGGTCAACTGGATATGTTTGT...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| 3UTR TCA 72 bp | ACTGTTCACAACAAGGAAGAGCAGCAAGAATCACACTaGCCATTGTTAGGACATCAGTCAGGTGGTGACACT | + |
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Preference number: 3 (lower is better) Translates to: TVHNKEEQQESH*PLLGHQSGGDT Trigger: AGTGTCACCACCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTGTGAACAGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| 3UTR-3UTR CAA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGGACAAACATATCCAGTaGACCAGAGTTCAAAAACCA | + |
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Preference number: 3 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMDKHIQ*TRVQKP Trigger: TGGTTTTTGAACTCTGGTCAACTGGATATGTTTGTC...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR GCA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGGTGCTCCTGGCGCTCTaGGCCCTCGGACTGGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: QQGRAARITLTIVRTSVRVLLAL*ALGLGG Trigger: GCCGCCCAGTCCGAGGGCGCAGAGCGCCAGGAGCAC...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGTCTGCGCCCTCGGACTaGGCGGCGCGTTCCTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: QQGRAARITLTIVRTSVRSAPSD*AARSSD Trigger: GTCGGAGGAACGCGCCGCCCAGTCCGAGGGCGCAGA...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR TCA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGAGCCGTCCCGGTCGATaGAGAAGCGCGCCCGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: QQGRAARITLTIVRTSVRSRPGR*RSAPGC Trigger: ACAGCCGGGCGCGCTTCTTCATCGACCGGGACGGCT...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR TCA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGCCCGGTAGCCCAGCGTaGGGAAGCCCGAGCGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: QQGRAARITLTIVRTSVRPGSPA*GSPSAC Trigger: ACAAGCGCTCGGGCTTCCTCACGCTGGGCTACCGGG...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR GCA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGGTGTACTTCTCCGGCTaGCGGTCGGGGTCGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: QQGRAARITLTIVRTSVRVYFSG*RSGSRL Trigger: GAGCCGCGACCCCGACCGGCAGCCGGAGAAGTACAC...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGGAGCTGCTGCTCCTTTaGGGCGAGGGCGGGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: QQGRAARITLTIVRTSVRELLLL*GEGGEV Trigger: CACTTCCCCGCCCTCGCCCCAAAGGAGCAGCAGCTC...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGACGCGCCGGGCGAGCTaGACGAGGAAACCATCTCGC | + |
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Preference number: 4 (lower is better) Translates to: QQGRAARITLTIVRTSVRTRRAS*TRKPSR Trigger: GCGAGATGGTTTCCTCGTCCAGCTCGCCCGGCGCGT...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGAATTTGGCGTCGGCCTaGTTGTCGCGCACGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: QQGRAARITLTIVRTSVRNLASA*LSRTVV Trigger: CACCACCGTGCGCGACAACCAGGCCGACGCCAAATT...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGCTGCTGGGCACTGGATaGGTTGTCCTGGGGAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: QQGRAARITLTIVRTSVRLLGTG*VVLGSA Trigger: AGCACTCCCCAGGACAACCCATCCAGTGCCCAGCAG...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR TCA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATCCGCCGCCGGCCCAGTaGCCCGAGAGAGCTGCACTT | + |
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Preference number: 4 (lower is better) Translates to: LGHQSGGDTVVNIECHQNPPPAQ*PERAAL Trigger: AAGTGCAGCTCTCTCGGGTCACTGGGCCGGCGGCGG...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR TCA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATTGCGCCCGCACACCATaGTGCGCGCCACACGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: LGHQSGGDTVVNIECHQNCARTP*CAPHAG Trigger: TCCGGCGTGTGGCGCGCATCATGGTGTGCGGGCGCA...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGACCAAGTCGGTGAGCTaGAAATACTCGGCCTCGCGC | + |
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Preference number: 4 (lower is better) Translates to: QQGRAARITLTIVRTSVRTKSVS*KYSASR Trigger: GCGCGAGGCCGAGTATTTCCAGCTCACCGACTTGGT...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR TCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGCGTCGCGGTACTGGTTaGCGAAGGCGGCGGTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMRRGTG*RRRRCP Trigger: CGGGCACCGCCGCCTTCGTCAACCAGTACCGCGACG...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR GCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGGAGGAGCTCCGCCGGTaGGGCGGCGGCAATGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMEELRR*GGGNGE Trigger: CTCTCCATTGCCGCCGCCGCACCGGCGGAGCTCCTC...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR GCA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGGGTTGTCCTGGGGAGTaGTTGCCTCTGAATGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: QQGRAARITLTIVRTSVRGCPGE*LPLNGC Trigger: ACAGCCATTCAGAGGCAAGCACTCCCCAGGACAACC...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGAGGGCGAGAACATGCTaGCCAAAGTACTGTCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: QQGRAARITLTIVRTSVRRARTC*PKYCPG Trigger: TCCCGGACAGTACTTTGGCCAGCATGTTCTCGCCCT...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGCCCCGAAGACCTCCTTaGCCAGCGCGATGCGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMPRRPP*PARCAR Trigger: GCGGGCGCATCGCGCTGGCCAAGGAGGTCTTCGGGG...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGCTGGATGGGTTGTCCTaGGGAGTGCTTGCCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: QQGRAARITLTIVRTSVRLDGLS*GVLASE Trigger: TTCAGAGGCAAGCACTCCCCAGGACAACCCATCCAG...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR GCA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATTGGTGCTGCCGCCGCTaGCCGTGTCCTTCAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LGHQSGGDTVVNIECHQNWCCRR*PCPSEP Trigger: TGGCTCTGAAGGACACGGGCAGCGGCGGCAGCACCA...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR GCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGTGGGCAGGATGGTGCTaGCGCCGCTGCCCGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMWAGWC*RRCPCP Trigger: AGGACACGGGCAGCGGCGGCAGCACCATCCTGCCCA...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR TCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGGGTCGCGGCTCTCGTTaGGCGTGTCCCCGAAGACCT | + |
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Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMGRGSR*ACPRRP Trigger: AGGTCTTCGGGGACACGCTCAACGAGAGCCGCGACC...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR GCA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATGCGTCGCTGCTACCCTaGGAGACGTTGTCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGHQSGGDTVVNIECHQNASLLP*ETLSSR Trigger: CCTGGAGGACAACGTCTCGCAGGGTAGCAGCGACGC...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATGTGCGGCGGCGGCAATaGAGAGGCAAGAAGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LGHQSGGDTVVNIECHQNVRRRQ*RGKKEL Trigger: CAGCTCCTTCTTGCCTCTCCATTGCCGCCGCCGCAC...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATCCACACGCCGGAATTTaGCGTCGGCCTGGTTGTCGC | + |
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Preference number: 4 (lower is better) Translates to: LGHQSGGDTVVNIECHQNPHAGI*RRPGCR Trigger: GCGACAACCAGGCCGACGCCAAATTCCGGCGTGTGG...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGGTGCTTGCCTCTGAATaGCTGTCACAACTGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: QQGRAARITLTIVRTSVRVLASE*LSQLEV Trigger: CACTTCCAGTTGTGACAGCCATTCAGAGGCAAGCAC...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGTCTGCGTTTGTCTGGTaGGGGTATCCATTGTACAGG | + |
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Preference number: 4 (lower is better) Translates to: QQGRAARITLTIVRTSVRSAFVW*GYPLYR Trigger: CCTGTACAATGGATACCCCCACCAGACAAACGCAGA...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR TCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGTACTGTCCGGGACGCTaGGCAGCGTCGAGTGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMYCPGR*AASSAW Trigger: CCAAGCACTCGACGCTGCTCAGCGTCCCGGACAGTA...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATTTGTCGTCGCGGTACTaGTTGACGAAGGCGGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: LGHQSGGDTVVNIECHQNLSSRY*LTKAAV Trigger: CACCGCCGCCTTCGTCAACCAGTACCGCGACGACAA...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR GCA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATGTGACCCGAGAGAGCTaGACTTTCTCGTTCCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: LGHQSGGDTVVNIECHQNVTRES*TFSFPE Trigger: CTCCGGGAACGAGAAAGTGCAGCTCTCTCGGGTCAC...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR GCA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATAGGTTGGTGAGCTGTTaGCTGCTGGGCACTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: LGHQSGGDTVVNIECHQNRLVSC*LLGTGW Trigger: CCATCCAGTGCCCAGCAGGCAACAGCTCACCAACCT...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATGCAGCGTCGAGTGCTTaGTCACATAAACCTGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LGHQSGGDTVVNIECHQNAASSA*SHKPGR Trigger: GCGGCCAGGTTTATGTGACCAAGCACTCGACGCTGC...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGTCCTCCAGGTCGCTCTaGCAGCCCTCGTCGTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMSSRSL*QPSSLR Trigger: TCTCAACGACGAGGGCTGCCAGAGCGACCTGGAGGA...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR TCA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATAATCCAGCACGTACCTaGAAAGGAAGCCGTCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: LGHQSGGDTVVNIECHQNNPART*KGSRPG Trigger: ACCGGGACGGCTTCCTTTTCAGGTACGTGCTGGATT...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR TCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGGAGAGTTCTGCTTGGTaGCCTTGGGCGACAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMESSAW*PWATAA Trigger: AGCTGCTGTCGCCCAAGGTCACCAAGCAGAACTCTC...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR TCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGGGGAGTGCTTGCCTCTaGATGGCTGTCACAACTGGA | + |
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Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMGSACL*MAVTTG Trigger: TCCAGTTGTGACAGCCATTCAGAGGCAAGCACTCCC...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR TCA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATAAAGTGTTAGGTTGGTaGGCTGTTGCCTGCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LGHQSGGDTVVNIECHQNKVLGW*AVACWA Trigger: TGCCCAGCAGGCAACAGCTCACCAACCTAACACTTT...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR GCA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATTCGTTGAGAGAGTTCTaGTTGGTGACCTTGGGCGAC | + |
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Preference number: 4 (lower is better) Translates to: LGHQSGGDTVVNIECHQNSLREF*LVTLGD Trigger: GTCGCCCAAGGTCACCAAGCAGAACTCTCTCAACGA...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR TCA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATTTGCTGATGAGGGTCTaGAAGAGTTCACTGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LGHQSGGDTVVNIECHQNLLMRV*KSSLFL Trigger: CAGAAACAGTGAACTCTTTCAGACCCTCATCAGCAA...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR GCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGAGAGTTCACTGTTTCTaGGTTTGTCTGGTGGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMRVHCF*VCLVGV Trigger: TACCCCCACCAGACAAACGCAGAAACAGTGAACTCT...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR GCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGTGCAACAGTTCAGATTaGCATTGGCGTTTGCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMCNSSD*HWRLRS Trigger: AGAGCGCAAACGCCAATGGCAATCTGAACTGTTGCA...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATAATGGCTGTCACAACTaGAAGTGGAGAGCTCATTAC | + |
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Preference number: 4 (lower is better) Translates to: LGHQSGGDTVVNIECHQNNGCHN*KWRAHY Trigger: GTAATGAGCTCTCCACTTCCAGTTGTGACAGCCATT...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGGTTTCTGCGTTTGTCTaGTGGGGGTATCCATTGTAC | + |
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Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMVSAFV*WGYPLY Trigger: GTACAATGGATACCCCCACCAGACAAACGCAGAAAC...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR TCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGCAGCAAGAATCACACTaGCCATTGTTAGGACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMQQESH*PLLGHQ Trigger: CTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTG...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGTGTCACAACTGGAAGTaGAGAGCTCATTACAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMCHNWK*RAHYRK Trigger: CTTCCTGTAATGAGCTCTCCACTTCCAGTTGTGACA...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGAGTTCAGATTGCCATTaGCGTTTGCGCTCTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMSSDCH*RLRSGK Trigger: TTTTCCAGAGCGCAAACGCCAATGGCAATCTGAACT...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR TCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGGGTGATACTATTTTCTaGGGTGGTCGGAAGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMGDTIF*GGRKKM Trigger: CATTTTCTTCCGACCACCTCAGAAAATAGTATCACC...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR GCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGATTGCCATTGGCGTTTaGGCTCTGGAAAATAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMIAIGV*ALENNL Trigger: CAGATTATTTTCCAGAGCGCAAACGCCAATGGCAAT...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGTTGGCGTTTGCGCTCTaGAAAATAATCTGGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMLAFAL*KIIWNV Trigger: CACATTCCAGATTATTTTCCAGAGCGCAAACGCCAA...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR TCA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATCACTTCCTTTATCAGTaGCTTTGTCATGTTTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LGHQSGGDTVVNIECHQNHFLYQ*LCHVSY Trigger: ATAGGAAACATGACAAAGTCACTGATAAAGGAAGTG...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR GCA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGTATAACCCATACTTCTaGAACAGTTCAGATTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMYNPYF*NSSDCH Trigger: ATGGCAATCTGAACTGTTGCAGAAGTATGGGTTATA...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS GCA 90 bp | AGCTGCACTTTCTCGTTCCCGGAGCCCGCGCCCCAGCCCTCCGCGTaGTCCTGGCGCTCTGCGCCCTCGGACTGGGCGGCGCGTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCTFSFPEPAPQPSA*SWRSAPSDWAARSS Trigger: GGAGGAACGCGCCGCCCAGTCCGAGGGCGCAGAGCGCCAGGAGCACGCGGAGGGCTGGGGCGCGGGCTCCGGGAACGAGAAAGTGCAGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS GCA 90 bp | CGAGCTCCATCGGAGGAGAGACGCGCGAGAGAGGAGCTCCGCCGGTaGGGCGGCGGCAATGGAGAGGCAAGAAGGAGCTGCTGCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RAPSEERRAREELRR*GGGNGEARRSCCSF Trigger: AAAGGAGCAGCAGCTCCTTCTTGCCTCTCCATTGCCGCCGCCGCACCGGCGGAGCTCCTCTCTCGCGCGTCTCTCCTCCGATGGAGCTCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS CCA 90 bp | AGCGCGTCGCTGCTACCCTGCGAGACGTTGTCCTCCAGGTCGCTCTaGCAGCCCTCGTCGTTGAGAGAGTTCTGCTTGGTGACCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SASLLPCETLSSRSL*QPSSLREFCLVTLG Trigger: GCCCAAGGTCACCAAGCAGAACTCTCTCAACGACGAGGGCTGCCAGAGCGACCTGGAGGACAACGTCTCGCAGGGTAGCAGCGACGCGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS GCA 90 bp | TTGTCCTCCAGGTCGCTCTGGCAGCCCTCGTCGTTGAGAGAGTTCTaGTTGGTGACCTTGGGCGACAGCAGCTTGACCAAGTCGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSRSLWQPSSLREF*LVTLGDSSLTKSVS Trigger: GCTCACCGACTTGGTCAAGCTGCTGTCGCCCAAGGTCACCAAGCAGAACTCTCTCAACGACGAGGGCTGCCAGAGCGACCTGGAGGACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CAA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGAGGAAGCCCGAGCGCTaGTCCTGCGCGCCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QQGRAARITLTIVRTSVRRKPER*SCAPPP Trigger: CGGCGGCGGCGCGCAGGACAAGCGCTCGGGCTTCCT...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS GCA 90 bp | GGTGAGCTGTTGCCTGCTGGGCACTGGATGGGTTGTCCTGGGGAGTaGTTGCCTCTGAATGGCTGTCACAACTGGAAGTGGAGAGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GELLPAGHWMGCPGE*LPLNGCHNWKWRAH Trigger: ATGAGCTCTCCACTTCCAGTTGTGACAGCCATTCAGAGGCAAGCACTCCCCAGGACAACCCATCCAGTGCCCAGCAGGCAACAGCTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360029.4 ENST00000515268.1 |
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| CDS TCA 90 bp | TGCCTGCTGGGCACTGGATGGGTTGTCCTGGGGAGTGCTTGCCTCTaGATGGCTGTCACAACTGGAAGTGGAGAGCTCATTACAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CLLGTGWVVLGSACL*MAVTTGSGELITGS Trigger: ACTTCCTGTAATGAGCTCTCCACTTCCAGTTGTGACAGCCATTCAGAGGCAAGCACTCCCCAGGACAACCCATCCAGTGCCCAGCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360029.4 ENST00000515268.1 |
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| CDS CCA 90 bp | TGCTGGGCACTGGATGGGTTGTCCTGGGGAGTGCTTGCCTCTGAATaGCTGTCACAACTGGAAGTGGAGAGCTCATTACAGGAAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CWALDGLSWGVLASE*LSQLEVESSLQEVP Trigger: TGGGACTTCCTGTAATGAGCTCTCCACTTCCAGTTGTGACAGCCATTCAGAGGCAAGCACTCCCCAGGACAACCCATCCAGTGCCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360029.4 ENST00000515268.1 |
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| CDS-3UTR CAA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGGGGTCGCGGCTCTCGTaGAGCGTGTCCCCGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: QQGRAARITLTIVRTSVRGSRLS*SVSPKT Trigger: GGTCTTCGGGGACACGCTCAACGAGAGCCGCGACCC...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS CCA 90 bp | ATGGGTTGTCCTGGGGAGTGCTTGCCTCTGAATGGCTGTCACAACTaGAAGTGGAGAGCTCATTACAGGAAGTCCCACTTTCACTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: MGCPGECLPLNGCHN*KWRAHYRKSHFHFL Trigger: AAGGAAGTGAAAGTGGGACTTCCTGTAATGAGCTCTCCACTTCCAGTTGTGACAGCCATTCAGAGGCAAGCACTCCCCAGGACAACCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360029.4 ENST00000515268.1 |
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| CDS-3UTR CAA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGTTCTGCTTGGTGACCTaGGGCGACAGCAGCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: QQGRAARITLTIVRTSVRFCLVT*GDSSLT Trigger: GGTCAAGCTGCTGTCGCCCAAGGTCACCAAGCAGAA...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS CCA 90 bp | TGTCCTGGGGAGTGCTTGCCTCTGAATGGCTGTCACAACTGGAAGTaGAGAGCTCATTACAGGAAGTCCCACTTTCACTTCCTTTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: CPGECLPLNGCHNWK*RAHYRKSHFHFLYQ Trigger: CTGATAAAGGAAGTGAAAGTGGGACTTCCTGTAATGAGCTCTCCACTTCCAGTTGTGACAGCCATTCAGAGGCAAGCACTCCCCAGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360029.4 ENST00000515268.1 |
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| CDS-3UTR CAA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGTCCCCGAAGACCTCCTaGGCCAGCGCGATGCGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMSPKTS*ASAMRP Trigger: CGGGCGCATCGCGCTGGCCAAGGAGGTCTTCGGGGA...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CAA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATGCCACACGCCGGAATTaGGCGTCGGCCTGGTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LGHQSGGDTVVNIECHQNATRRN*ASAWLS Trigger: CGACAACCAGGCCGACGCCAAATTCCGGCGTGTGGC...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CAA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGTCGTCGCGGTACTGGTaGACGAAGGCGGCGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMSSRYW*TKAAVP Trigger: GGGCACCGCCGCCTTCGTCAACCAGTACCGCGACGA...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CAA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATCTACCCTGCGAGACGTaGTCCTCCAGGTCGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGHQSGGDTVVNIECHQNLPCET*SSRSLW Trigger: CCAGAGCGACCTGGAGGACAACGTCTCGCAGGGTAG...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS TCA 90 bp | TTCTTTTTGGACAGATTTGTTTCCCGGGACTTGCTGATGAGGGTCTaGAAGAGTTCACTGTTTCTGCGTTTGTCTGGTGGGGGTATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FFLDRFVSRDLLMRV*KSSLFLRLSGGGIH Trigger: ATGGATACCCCCACCAGACAAACGCAGAAACAGTGAACTCTTTCAGACCCTCATCAGCAAGTCCCGGGAAACAAATCTGTCCAAAAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CAA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGTGGGCACTGGATGGGTaGTCCTGGGGAGTGCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMWALDG*SWGVLA Trigger: GGCAAGCACTCCCCAGGACAACCCATCCAGTGCCCA...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS GCA 90 bp | GGTCCTGCTGCCAAGCATCTGGCCCTGGTTCTGCATCTTGATTCATaGTTGATCTGGCAAGCAATCATAAATAGCCATATATTCAAACGT | + |
|
Preference number: 5 (lower is better) Translates to: GPAAKHLALVLHLDS*LIWQAIINSHIFKR Trigger: ACGTTTGAATATATGGCTATTTATGATTGCTTGCCAGATCAAGCATGAATCAAGATGCAGAACCAGGGCCAGATGCTTGGCAGCAGGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515268.1 |
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| CDS-3UTR CAA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGCTCCGGCAGCGCGAGTaGCTTGTCCCGCAGATAATC | + |
|
Preference number: 5 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMLRQRE*LVPQII Trigger: GATTATCTGCGGGACAAGCAACTCGCGCTGCCGGAG...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CAA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGTTGGGCGACAGCAGCTaGACCAAGTCGGTGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMLGDSS*TKSVSW Trigger: CCAGCTCACCGACTTGGTCAAGCTGCTGTCGCCCAA...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CAA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATTGGCAGCCCTCGTCGTaGAGAGAGTTCTGCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGHQSGGDTVVNIECHQNWQPSS*REFCLV Trigger: CACCAAGCAGAACTCTCTCAACGACGAGGGCTGCCA...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CAA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGTGTCCTGGGGAGTGCTaGCCTCTGAATGGCTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMCPGEC*PLNGCH Trigger: GTGACAGCCATTCAGAGGCAAGCACTCCCCAGGACA...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS TCA 90 bp | ATCAGTGACTTTGTCATGTTTCCTATCTTCATGTTCTTGTTTAGGTaGTACTATTTTCTGAGGTGGTCCTGCTGCCAAGCATCTGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: ISDFVMFPIFMFLFR*YYFLRWSCCQASGP Trigger: AGGGCCAGATGCTTGGCAGCAGGACCACCTCAGAAAATAGTATCACCTAAACAAGAACATGAAGATAGGAAACATGACAAAGTCACTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515268.1 |
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| CDS-3UTR CAA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGTTGAGAGAGTTCTGCTaGGTGACCTTGGGCGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMLREFC*VTLGDS Trigger: GCTGTCGCCCAAGGTCACCAAGCAGAACTCTCTCAA...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CAA 90 bp | CAACAAGGAAGAGCAGCAAGAATCACACTGACCATTGTTAGGACATCAGTCAGGGACAAACATATCCAGTaGACCAGAGTTCAAAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: QQGRAARITLTIVRTSVRDKHIQ*TRVQKP Trigger: TGGTTTTTGAACTCTGGTCAACTGGATATGTTTGTC...CCTGACTGATGTCCTAACAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CAA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATCAGTTCAGATTGCCATaGGCGTTTGCGCTCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LGHQSGGDTVVNIECHQNQFRLP*AFALWK Trigger: TTTCCAGAGCGCAAACGCCAATGGCAATCTGAACTG...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CAA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGCTGCAACAGTTCAGATaGCCATTGGCGTTTGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMLQQFR*PLAFAL Trigger: GAGCGCAAACGCCAATGGCAATCTGAACTGTTGCAG...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CAA 90 bp | TTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGTCACTGTTTCTGCGTTaGTCTGGTGGGGGTATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LDSFRFGSYSHRLKFYLMSLFLR*SGGGIH Trigger: ATGGATACCCCCACCAGACAAACGCAGAAACAGTGA...CATCAAGTAAAATTTTAGACGATGGCTATAGGACCCAAATCTAAAGCTGTCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CAA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATTCACAGACTTTCTTTTaGGACAGATTTGTTTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LGHQSGGDTVVNIECHQNSQTFF*DRFVSR Trigger: CCGGGAAACAAATCTGTCCAAAAAGAAAGTCTGTGA...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS TCA 90 bp | ATCAGTGACTTTGTCATGTTTCCTATCTTCATGTTCTTGTTTAGGTaGTACTATTTTCTGAGGTGGTCGGAAGAAAATGTACTCGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: ISDFVMFPIFMFLFR*YYFLRWSEENVLGV Trigger: TACACCGAGTACATTTTCTTCCGACCACCTCAGAAAATAGTATCACCTAAACAAGAACATGAAGATAGGAAACATGACAAAGTCACTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS-3UTR CAA 90 bp | TTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATCCTTTATCAGTGACTTaGTCATGTTTCCTATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGHQSGGDTVVNIECHQNPLSVT*SCFLSS Trigger: TGAAGATAGGAAACATGACAAAGTCACTGATAAAGG...ATTTTGATGACATTCAATGTTTACTACAGTGTCACCACCTGACTGATGTCCTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS GCA 72 bp | TTCTCGTTCCCGGAGCCCGCGCCCCAGCCCTCCGCGTaGTCCTGGCGCTCTGCGCCCTCGGACTGGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: FSFPEPAPQPSA*SWRSAPSDWAA Trigger: CGCCGCCCAGTCCGAGGGCGCAGAGCGCCAGGAGCACGCGGAGGGCTGGGGCGCGGGCTCCGGGAACGAGAA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS GCA 72 bp | GCCGCCCCGCGCAGCAGCAGCGCGTCGCTGCTACCCTaGGAGACGTTGTCCTCCAGGTCGCTCTGGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AAPRSSSASLLP*ETLSSRSLWQP Trigger: GGGCTGCCAGAGCGACCTGGAGGACAACGTCTCGCAGGGTAGCAGCGACGCGCTGCTGCTGCGCGGGGCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS CAA 90 bp | GCCGCCCCGCGCAGCAGCAGCGCGTCGCTGCTACCCTGCGAGACGTaGTCCTCCAGGTCGCTCTGGCAGCCCTCGTCGTTGAGAGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: AAPRSSSASLLPCET*SSRSLWQPSSLREF Trigger: GAACTCTCTCAACGACGAGGGCTGCCAGAGCGACCTGGAGGACAACGTCTCGCAGGGTAGCAGCGACGCGCTGCTGCTGCGCGGGGCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS GCA 72 bp | TCGGAGGAGAGACGCGCGAGAGAGGAGCTCCGCCGGTaGGGCGGCGGCAATGGAGAGGCAAGAAGGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SEERRAREELRR*GGGNGEARRSC Trigger: GCAGCTCCTTCTTGCCTCTCCATTGCCGCCGCCGCACCGGCGGAGCTCCTCTCTCGCGCGTCTCTCCTCCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS CAA 72 bp | CGCAGCAGCAGCGCGTCGCTGCTACCCTGCGAGACGTaGTCCTCCAGGTCGCTCTGGCAGCCCTCGTCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSSSASLLPCET*SSRSLWQPSSL Trigger: CAACGACGAGGGCTGCCAGAGCGACCTGGAGGACAACGTCTCGCAGGGTAGCAGCGACGCGCTGCTGCTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS CAA 72 bp | TCGCGGCTCTCGTTGAGCGTGTCCCCGAAGACCTCCTaGGCCAGCGCGATGCGCCCGCACACCATGATGCGC | + |
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Preference number: 6 (lower is better) Translates to: SRLSLSVSPKTS*ASAMRPHTMMR Trigger: GCGCATCATGGTGTGCGGGCGCATCGCGCTGGCCAAGGAGGTCTTCGGGGACACGCTCAACGAGAGCCGCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS CAA 90 bp | CCCTGCGAGACGTTGTCCTCCAGGTCGCTCTGGCAGCCCTCGTCGTaGAGAGAGTTCTGCTTGGTGACCTTGGGCGACAGCAGCTTGACC | + |
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Preference number: 6 (lower is better) Translates to: PCETLSSRSLWQPSS*REFCLVTLGDSSLT Trigger: GGTCAAGCTGCTGTCGCCCAAGGTCACCAAGCAGAACTCTCTCAACGACGAGGGCTGCCAGAGCGACCTGGAGGACAACGTCTCGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS CAA 90 bp | TCCTCCAGGTCGCTCTGGCAGCCCTCGTCGTTGAGAGAGTTCTGCTaGGTGACCTTGGGCGACAGCAGCTTGACCAAGTCGGTGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSRSLWQPSSLREFC*VTLGDSSLTKSVSW Trigger: CCAGCTCACCGACTTGGTCAAGCTGCTGTCGCCCAAGGTCACCAAGCAGAACTCTCTCAACGACGAGGGCTGCCAGAGCGACCTGGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS CCA 72 bp | CTGCTACCCTGCGAGACGTTGTCCTCCAGGTCGCTCTaGCAGCCCTCGTCGTTGAGAGAGTTCTGCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LLPCETLSSRSL*QPSSLREFCLV Trigger: CACCAAGCAGAACTCTCTCAACGACGAGGGCTGCCAGAGCGACCTGGAGGACAACGTCTCGCAGGGTAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS CAA 72 bp | ACGTTGTCCTCCAGGTCGCTCTGGCAGCCCTCGTCGTaGAGAGAGTTCTGCTTGGTGACCTTGGGCGACAGC | + |
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Preference number: 6 (lower is better) Translates to: TLSSRSLWQPSS*REFCLVTLGDS Trigger: GCTGTCGCCCAAGGTCACCAAGCAGAACTCTCTCAACGACGAGGGCTGCCAGAGCGACCTGGAGGACAACGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS GCA 72 bp | AGGTCGCTCTGGCAGCCCTCGTCGTTGAGAGAGTTCTaGTTGGTGACCTTGGGCGACAGCAGCTTGACCAAG | + |
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Preference number: 6 (lower is better) Translates to: RSLWQPSSLREF*LVTLGDSSLTK Trigger: CTTGGTCAAGCTGCTGTCGCCCAAGGTCACCAAGCAGAACTCTCTCAACGACGAGGGCTGCCAGAGCGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS CAA 72 bp | TCGCTCTGGCAGCCCTCGTCGTTGAGAGAGTTCTGCTaGGTGACCTTGGGCGACAGCAGCTTGACCAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: SLWQPSSLREFC*VTLGDSSLTKS Trigger: CGACTTGGTCAAGCTGCTGTCGCCCAAGGTCACCAAGCAGAACTCTCTCAACGACGAGGGCTGCCAGAGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS GCA 72 bp | TTGCCTGCTGGGCACTGGATGGGTTGTCCTGGGGAGTaGTTGCCTCTGAATGGCTGTCACAACTGGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: LPAGHWMGCPGE*LPLNGCHNWKW Trigger: CCACTTCCAGTTGTGACAGCCATTCAGAGGCAAGCACTCCCCAGGACAACCCATCCAGTGCCCAGCAGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360029.4 ENST00000515268.1 |
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| CDS CAA 72 bp | CCTGCTGGGCACTGGATGGGTTGTCCTGGGGAGTGCTaGCCTCTGAATGGCTGTCACAACTGGAAGTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: PAGHWMGCPGEC*PLNGCHNWKWR Trigger: TCTCCACTTCCAGTTGTGACAGCCATTCAGAGGCAAGCACTCCCCAGGACAACCCATCCAGTGCCCAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360029.4 ENST00000515268.1 |
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| CDS CAA 90 bp | GAGCTGTTGCCTGCTGGGCACTGGATGGGTTGTCCTGGGGAGTGCTaGCCTCTGAATGGCTGTCACAACTGGAAGTGGAGAGCTCATTAC | + |
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Preference number: 6 (lower is better) Translates to: ELLPAGHWMGCPGEC*PLNGCHNWKWRAHY Trigger: GTAATGAGCTCTCCACTTCCAGTTGTGACAGCCATTCAGAGGCAAGCACTCCCCAGGACAACCCATCCAGTGCCCAGCAGGCAACAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360029.4 ENST00000515268.1 |
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| CDS CAA 72 bp | AGAGAGTTCTGCTTGGTGACCTTGGGCGACAGCAGCTaGACCAAGTCGGTGAGCTGGAAATACTCGGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: REFCLVTLGDSS*TKSVSWKYSAS Trigger: CGAGGCCGAGTATTTCCAGCTCACCGACTTGGTCAAGCTGCTGTCGCCCAAGGTCACCAAGCAGAACTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS CCA 72 bp | CTGGATGGGTTGTCCTGGGGAGTGCTTGCCTCTGAATaGCTGTCACAACTGGAAGTGGAGAGCTCATTACAG | + |
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Preference number: 6 (lower is better) Translates to: LDGLSWGVLASE*LSQLEVESSLQ Trigger: CTGTAATGAGCTCTCCACTTCCAGTTGTGACAGCCATTCAGAGGCAAGCACTCCCCAGGACAACCCATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360029.4 ENST00000515268.1 |
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| CDS CCA 72 bp | CCTGGGGAGTGCTTGCCTCTGAATGGCTGTCACAACTaGAAGTGGAGAGCTCATTACAGGAAGTCCCACTTT | + |
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Preference number: 6 (lower is better) Translates to: PGECLPLNGCHN*KWRAHYRKSHF Trigger: AAAGTGGGACTTCCTGTAATGAGCTCTCCACTTCCAGTTGTGACAGCCATTCAGAGGCAAGCACTCCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360029.4 ENST00000515268.1 |
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| CDS TCA 72 bp | GACAGATTTGTTTCCCGGGACTTGCTGATGAGGGTCTaGAAGAGTTCACTGTTTCTGCGTTTGTCTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: DRFVSRDLLMRV*KSSLFLRLSGG Trigger: CCCACCAGACAAACGCAGAAACAGTGAACTCTTTCAGACCCTCATCAGCAAGTCCCGGGAAACAAATCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS CCA 72 bp | GAGTGCTTGCCTCTGAATGGCTGTCACAACTGGAAGTaGAGAGCTCATTACAGGAAGTCCCACTTTCACTTC | + |
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Preference number: 6 (lower is better) Translates to: ECLPLNGCHNWK*RAHYRKSHFHF Trigger: GAAGTGAAAGTGGGACTTCCTGTAATGAGCTCTCCACTTCCAGTTGTGACAGCCATTCAGAGGCAAGCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360029.4 ENST00000515268.1 |
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| CDS GCA 72 bp | CTGCAGGAATGTGACAATTACTATAACCCATACTTCTaGAACAGTTCAGATTGCCATTGGCGTTTGCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LQECDNYYNPYF*NSSDCHWRLRS Trigger: AGAGCGCAAACGCCAATGGCAATCTGAACTGTTGCAGAAGTATGGGTTATAGTAATTGTCACATTCCTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360029.4 |
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| CDS GCA 72 bp | GCCAAGCATCTGGCCCTGGTTCTGCATCTTGATTCATaGTTGATCTGGCAAGCAATCATAAATAGCCATATA | + |
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Preference number: 6 (lower is better) Translates to: AKHLALVLHLDS*LIWQAIINSHI Trigger: TATATGGCTATTTATGATTGCTTGCCAGATCAAGCATGAATCAAGATGCAGAACCAGGGCCAGATGCTTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515268.1 |
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| CDS CAA 90 bp | AGCTCATTACAGGAAGTCCCACTTTCACTTCCTTTATCAGTGACTTaGTCATGTTTCCTATCTTCATGTTCTTGTTTAGGTGATACTATT | + |
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Preference number: 6 (lower is better) Translates to: SSLQEVPLSLPLSVT*SCFLSSCSCLGDTI Trigger: AATAGTATCACCTAAACAAGAACATGAAGATAGGAAACATGACAAAGTCACTGATAAAGGAAGTGAAAGTGGGACTTCCTGTAATGAGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360029.4 ENST00000515268.1 |
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