Pregenerated sensors for KCTD6 (Homo sapiens)
Ensembl gene IDs: ENSG00000168301Ensembl transcript IDs: ENST00000355076.6, ENST00000404589.8, ENST00000479470.1, ENST00000490264.1, ENST00000491093.5
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGGTATCTTCCATTTCCTaGAGAGTCTTTCCAGGAACC | + |
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Preference number: 2 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRVSSIS*RVFPGT Trigger: GGTTCCTGGAAAGACTCTCCAGGAAATGGAAGATAC...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| 3UTR-3UTR GCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGCCTTCTGGTCCTCACTaGCTTCAAATAAATACAACT | + |
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Preference number: 2 (lower is better) Translates to: GDSEQAHAYSGGREQNMEPSGPH*LQINTT Trigger: AGTTGTATTTATTTGAAGGCAGTGAGGACCAGAAGG...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| 3UTR-3UTR GCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGCCTTCTGGTCCTCACTaGCTTCAAATAAATACAACT | + |
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Preference number: 2 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRPSGPH*LQINTT Trigger: AGTTGTATTTATTTGAAGGCAGTGAGGACCAGAAGG...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| 3UTR-3UTR CCA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACAGTATCTTCCATTTCCTaGAGAGTCTTTCCAGGAACC | + |
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Preference number: 2 (lower is better) Translates to: YLETLNRHMHTQGEGNKTVSSIS*RVFPGT Trigger: GGTTCCTGGAAAGACTCTCCAGGAAATGGAAGATAC...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR TCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGCCCGCTCACTCATGTaGTGCACCCGGGTGTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMEARSLM*CTRVLR Trigger: CCGCAACACCCGGGTGCATCACATGAGTGAGCGGGC...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR GCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGCAGGTTTCAGGGAAATaGGCGGCGGCGGCGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMEQVSGK*AAAAAA Trigger: AGCAGCCGCCGCCGCCGCGCATTTCCCTGAAACCTG...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000404589.8 |
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| CDS-3UTR CCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGCCTTTCTCAACCATGTaGTTGCGCGGCGGCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMEPFSTM*LRGGGG Trigger: GCCGCCGCCGCCGCGCAACCACATGGTTGAGAAAGG...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000490264.1 |
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| CDS-3UTR GCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGCCGAGAGGCGGAGGTTaGAGTGAGCCGAGACTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRPRGGG*SEPRLC Trigger: GCACAGTCTCGGCTCACTGCAACCTCCGCCTCTCGG...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000355076.6 |
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| CDS-3UTR TCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGGCAGGAGCATCACTTaGACCCGAGAGGCGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMEGRSIT*TREAEV Trigger: AACCTCCGCCTCTCGGGTTCAAGTGATGCTCCTGCC...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000355076.6 |
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| CDS-3UTR TCA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACAGCCCGCTCACTCATGTaGTGCACCCGGGTGTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: YLETLNRHMHTQGEGNKTARSLM*CTRVLR Trigger: CCGCAACACCCGGGTGCATCACATGAGTGAGCGGGC...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR GCA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATCTCAACCATGTGGTTaGGCGGCGGCGGCGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YLETLNRHMHTQGEGNKTSQPCG*AAAAAA Trigger: AGCAGCCGCCGCCGCCGCGCAACCACATGGTTGAGA...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000490264.1 |
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| CDS-3UTR GCA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACACCGAGACTGTGCCACTaGACACCAGCCCCTGCAACA | + |
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Preference number: 4 (lower is better) Translates to: YLETLNRHMHTQGEGNKTPRLCH*TPAPAT Trigger: TGTTGCAGGGGCTGGTGTGCAGTGGCACAGTCTCGG...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000355076.6 |
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| CDS-3UTR CCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGCTTTCCAGGAACCTGTaGCAGGGTCGGAGATCAGTC | + |
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Preference number: 4 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRLSRNL*QGRRSV Trigger: GACTGATCTCCGACCCTGCCACAGGTTCCTGGAAAG...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR TCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGTCGTCCTTGCTCAGCTaGAACCTACTACAGGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMESSLLS*NLLQGK Trigger: TTTGCCCTGTAGTAGGTTTCAGCTGAGCAAGGACGA...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000355076.6 |
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| CDS-3UTR CCA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACACTTTCCAGGAACCTGTaGCAGGGTCGGAGATCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YLETLNRHMHTQGEGNKTLSRNL*QGRRSV Trigger: GACTGATCTCCGACCCTGCCACAGGTTCCTGGAAAG...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR TCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGGGATCATTGAGACACTaGATCAAGGGCTCAATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRGSLRH*IKGSIW Trigger: CCAGATTGAGCCCTTGATTCAGTGTCTCAATGATCC...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGTACAGGGCAAAGATCTaGGGAAGAAAGCATTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMEYRAKI*GRKHSP Trigger: AGGGGAATGCTTTCTTCCCCAGATCTTTGCCCTGTA...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000355076.6 |
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| CDS-3UTR TCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGAACGCGTCAATGTGGTaGGAGACGTTGTATACAAGT | + |
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Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMENASMW*ETLYTS Trigger: ACTTGTATACAACGTCTCTCACCACATTGACGCGTT...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR TCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGAACGCGTCAATGTGGTaGGAGACGTTGTATACAAGT | + |
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Preference number: 4 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRNASMW*ETLYTS Trigger: ACTTGTATACAACGTCTCTCACCACATTGACGCGTT...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR GCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGGTGGTGATGGTTAGTTaGGTTATGATGACAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRVVMVS*VMMTAT Trigger: AGTGGCTGTCATCATAACGCAACTAACCATCACCAC...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGAAACCTGGCAGTCTCTaGTGTCCATCATGTGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMEKPGSL*CPSCAY Trigger: ATAAGCACATGATGGACACCAGAGACTGCCAGGTTT...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGAAACCTGGCAGTCTCTaGTGTCCATCATGTGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRKPGSL*CPSCAY Trigger: ATAAGCACATGATGGACACCAGAGACTGCCAGGTTT...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGAAAGTAAAGGAAACCTaGCAGTCTCTGGTGTCCATC | + |
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Preference number: 4 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRKVKET*QSLVSI Trigger: GATGGACACCAGAGACTGCCAGGTTTCCTTTACTTT...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGAAAGTAAAGGAAACCTaGCAGTCTCTGGTGTCCATC | + |
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Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMEKVKET*QSLVSI Trigger: GATGGACACCAGAGACTGCCAGGTTTCCTTTACTTT...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGTATCTTCCATTTCCTaGAGAGTCTTTCCAGGAACC | + |
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Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMEVSSIS*RVFPGT Trigger: GGTTCCTGGAAAGACTCTCCAGGAAATGGAAGATAC...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGGGTAGACAGTACACTTaGGAATTATACTGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRGRQYT*ELYCTR Trigger: CCTGGTGCAGTATAATTCCCAAGTGTACTGTCTACC...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGGTAGACAGTACACTTaGGAATTATACTGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMEGRQYT*ELYCTR Trigger: CCTGGTGCAGTATAATTCCCAAGTGTACTGTCTACC...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR GCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGAAAACTACTCGTCCTTaGTCAGCTGAAACCTACTAC | + |
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Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMEKTTRP*SAETYY Trigger: GTAGTAGGTTTCAGCTGAGCAAGGACGAGTAGTTTT...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000355076.6 |
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| CDS-3UTR GCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGCAGAAAGTCCAGTTGTaGTCCACTGTGTTTTCATTG | + |
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Preference number: 4 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRQKVQL*STVFSL Trigger: CAATGAAAACACAGTGGAGCACAACTGGACTTTCTG...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR GCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGCAGAAAGTCCAGTTGTaGTCCACTGTGTTTTCATTG | + |
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Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMEQKVQL*STVFSL Trigger: CAATGAAAACACAGTGGAGCACAACTGGACTTTCTG...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGTATGATGACAGCCACTaGGTTGGAGTACTTAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMEYDDSH*VGVLRK Trigger: CTTTCTAAGTACTCCAACCCAGTGGCTGTCATCATA...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGCCTTCTAGTAAGGAATaGACCTTAGTGGTGATGGTT | + |
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Preference number: 4 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRPSSKE*TLVVMV Trigger: AACCATCACCACTAAGGTCCATTCCTTACTAGAAGG...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGATGTATTCCATCAGGTaGACCCTAAGAGAAACTTCC | + |
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Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMEMYSIR*TLRETS Trigger: GGAAGTTTCTCTTAGGGTCCACCTGATGGAATACAT...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR TCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGCACCTACATTTAATGTaGCTGGGTCAGTCATCATAT | + |
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Preference number: 4 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRHLHLM*LGQSSY Trigger: ATATGATGACTGACCCAGTCACATTAAATGTAGGTG...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR TCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGCACCTACATTTAATGTaGCTGGGTCAGTCATCATAT | + |
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Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMEHLHLM*LGQSSY Trigger: ATATGATGACTGACCCAGTCACATTAAATGTAGGTG...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR TCA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACAAACGCGTCAATGTGGTaGGAGACGTTGTATACAAGT | + |
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Preference number: 4 (lower is better) Translates to: YLETLNRHMHTQGEGNKTNASMW*ETLYTS Trigger: ACTTGTATACAACGTCTCTCACCACATTGACGCGTT...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR GCA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATCTCCATTATCCATCTaGTCCAGTGATGCGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: YLETLNRHMHTQGEGNKTSPLSI*SSDASS Trigger: TGAAGACGCATCACTGGAGCAGATGGATAATGGAGA...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR GCA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACAGTGGTGATGGTTAGTTaGGTTATGATGACAGCCACT | + |
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Preference number: 4 (lower is better) Translates to: YLETLNRHMHTQGEGNKTVVMVS*VMMTAT Trigger: AGTGGCTGTCATCATAACGCAACTAACCATCACCAC...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACAAAACCTGGCAGTCTCTaGTGTCCATCATGTGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: YLETLNRHMHTQGEGNKTKPGSL*CPSCAY Trigger: ATAAGCACATGATGGACACCAGAGACTGCCAGGTTT...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACAGGTAGACAGTACACTTaGGAATTATACTGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YLETLNRHMHTQGEGNKTGRQYT*ELYCTR Trigger: CCTGGTGCAGTATAATTCCCAAGTGTACTGTCTACC...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR TCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGCTAGGTCACCCTACATaGTGTTTTGATTTTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRLGHPT*CFDFSQ Trigger: TTGAGAAAAATCAAAACATCATGTAGGGTGACCTAG...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR TCA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGCTAGGTCACCCTACATaGTGTTTTGATTTTTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: GDSEQAHAYSGGREQNMELGHPT*CFDFSQ Trigger: TTGAGAAAAATCAAAACATCATGTAGGGTGACCTAG...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR GCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGAATCTGGTAAAAATCTaGTTCTTTCCGAAGCAGATC | + |
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Preference number: 4 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRNLVKI*FFPKQI Trigger: GATCTGCTTCGGAAAGAAGCAGATTTTTACCAGATT...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR GCA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACACAGAAAGTCCAGTTGTaGTCCACTGTGTTTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: YLETLNRHMHTQGEGNKTQKVQL*STVFSL Trigger: CAATGAAAACACAGTGGAGCACAACTGGACTTTCTG...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGTCTACAACCTTATCCTaGTACAAACCTATAATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRSTTLS*YKPIMV Trigger: GACCATTATAGGTTTGTACCAGGATAAGGTTGTAGA...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000355076.6 |
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| CDS-3UTR CCA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATATGATGACAGCCACTaGGTTGGAGTACTTAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YLETLNRHMHTQGEGNKTYDDSH*VGVLRK Trigger: CTTTCTAAGTACTCCAACCCAGTGGCTGTCATCATA...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACAATGTATTCCATCAGGTaGACCCTAAGAGAAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YLETLNRHMHTQGEGNKTMYSIR*TLRETS Trigger: GGAAGTTTCTCTTAGGGTCCACCTGATGGAATACAT...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR TCA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACACACCTACATTTAATGTaGCTGGGTCAGTCATCATAT | + |
|
Preference number: 4 (lower is better) Translates to: YLETLNRHMHTQGEGNKTHLHLM*LGQSSY Trigger: ATATGATGACTGACCCAGTCACATTAAATGTAGGTG...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR GCA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACACCTTCTGGTCCTCACTaGCTTCAAATAAATACAACT | + |
|
Preference number: 4 (lower is better) Translates to: YLETLNRHMHTQGEGNKTPSGPH*LQINTT Trigger: AGTTGTATTTATTTGAAGGCAGTGAGGACCAGAAGG...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR GCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGGGGAAACTTCAAAATTaGCTTGTATTGAGTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRGKLQN*LVLSFA Trigger: AGCAAAACTCAATACAAGGCAATTTTGAAGTTTCCC...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGACTTATTTATTGGTTTaGAAACTAGGTCACCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRTYLLV*KLGHPT Trigger: TGTAGGGTGACCTAGTTTCCAAACCAATAAATAAGT...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CCA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACAACTTATTTATTGGTTTaGAAACTAGGTCACCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: YLETLNRHMHTQGEGNKTTYLLV*KLGHPT Trigger: TGTAGGGTGACCTAGTTTCCAAACCAATAAATAAGT...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS GCA 90 bp | TTCAAGAGCCCAGGTTTCAGGGAAATGCGCGGCGGCGGCGGCTGCTaGGGCCGGGCCGGGAGATGCCCGCGGCCGGAGAGCGCGAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: FKSPGFREMRGGGGC*GRAGRCPRPESASA Trigger: CGCGCTCGCGCTCTCCGGCCGCGGGCATCTCCCGGCCCGGCCGCAGCAGCCGCCGCCGCCGCGCATTTCCCTGAAACCTGGGCTCTTGAA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404589.8 |
||
| CDS GCA 90 bp | GTCTTCAAGAGCCCAGGTTTCAGGGAAATGCGCGGCGGCGGCGGCTaGTGCGGCCGGGCCGGGAGATGCCCGCGGCCGGAGAGCGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VFKSPGFREMRGGGG*CGRAGRCPRPESAS Trigger: GCTCGCGCTCTCCGGCCGCGGGCATCTCCCGGCCCGGCCGCAGCAGCCGCCGCCGCCGCGCATTTCCCTGAAACCTGGGCTCTTGAAGAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404589.8 |
||
| CDS-3UTR CAA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATTCTCAACCATGTGGTaGCGCGGCGGCGGCGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YLETLNRHMHTQGEGNKTFSTMW*RGGGGC Trigger: GCAGCCGCCGCCGCCGCGCAACCACATGGTTGAGAA...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000490264.1 |
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| CDS-3UTR CAA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGAGGCAGGAGCATCACTaGAACCCGAGAGGCGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GDSEQAHAYSGGREQNMERQEHH*NPRGGG Trigger: ACCTCCGCCTCTCGGGTTCAAGTGATGCTCCTGCCT...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000355076.6 |
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| CDS TCA 90 bp | GTCCAGTTGTGCTCCACTGTGTTTTCATTGGCCCGCTCACTCATGTaGTGCACCCGGGTGTTGCGGATCGTGAAACCTTGTTTTGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: VQLCSTVFSLARSLM*CTRVLRIVKPCFVM Trigger: CATTACAAAACAAGGTTTCACGATCCGCAACACCCGGGTGCATCACATGAGTGAGCGGGCCAATGAAAACACAGTGGAGCACAACTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CAA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGAATAAAGTAATTGCCTaGAGGGTCTCGAGCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRNKVIA*RVSSCG Trigger: CCCACAGCTCGAGACCCTCAAGGCAATTACTTTATT...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CAA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGATGACAGCCACTGGGTaGGAGTACTTAGAAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GDSEQAHAYSGGREQNMEMTATG*EYLESF Trigger: GAAGCTTTCTAAGTACTCCAACCCAGTGGCTGTCAT...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS CCA 90 bp | ACTACTCGTCCTTGCTCAGCTGAAACCTACTACAGGGCAAAGATCTaGGGAAGAAAGCATTCCCCTAGGGCCTTCTACATGTCCTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: TTRPCSAETYYRAKI*GRKHSPRAFYMSCI Trigger: AATACAGGACATGTAGAAGGCCCTAGGGGAATGCTTTCTTCCCCAGATCTTTGCCCTGTAGTAGGTTTCAGCTGAGCAAGGACGAGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000355076.6 ENST00000479470.1 |
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| CDS-3UTR CAA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACAAATAAAGTAATTGCCTaGAGGGTCTCGAGCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: YLETLNRHMHTQGEGNKTNKVIA*RVSSCG Trigger: CCCACAGCTCGAGACCCTCAAGGCAATTACTTTATT...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CAA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACAATGACAGCCACTGGGTaGGAGTACTTAGAAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YLETLNRHMHTQGEGNKTMTATG*EYLESF Trigger: GAAGCTTTCTAAGTACTCCAACCCAGTGGCTGTCAT...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CAA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGCGGATCGTGAAACCTaGTTTTGTAATGTATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GDSEQAHAYSGGREQNMEADRET*FCNVFH Trigger: ATGGAATACATTACAAAACAAGGTTTCACGATCCGC...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CAA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGGCGGATCGTGAAACCTaGTTTTGTAATGTATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRADRET*FCNVFH Trigger: ATGGAATACATTACAAAACAAGGTTTCACGATCCGC...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CAA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGCATCTAAAGGAGTCTTaGGGGTTAACATTCACATAC | + |
|
Preference number: 5 (lower is better) Translates to: GDSEQAHAYSGGREQNMEHLKES*GLTFTY Trigger: GTATGTGAATGTTAACCCCAAAGACTCCTTTAGATG...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000490264.1 |
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| CDS GCA 90 bp | GAGATGCCTTCTAGTAAGGAATGGACCTTAGTGGTGATGGTTAGTTaGGTTATGATGACAGCCACTGGGTTGGAGTACTTAGAAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EMPSSKEWTLVVMVS*VMMTATGLEYLESF Trigger: GAAGCTTTCTAAGTACTCCAACCCAGTGGCTGTCATCATAACGCAACTAACCATCACCACTAAGGTCCATTCCTTACTAGAAGGCATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CAA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGAAGTTCTTAAGAAGTaGAGGACATATCGGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GDSEQAHAYSGGREQNMEEVLKK*RTYRKR Trigger: TCTTTTCCGATATGTCCTCAACTTCTTAAGAACTTC...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CAA 90 bp | GAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGGTACTTATTTATTGGTTaGGAAACTAGGTCACCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: ETLNRHMHTQGEGNKTWRYLFIG*ETRSPY Trigger: GTAGGGTGACCTAGTTTCCAAACCAATAAATAAGTA...CCTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CAA 90 bp | GGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACATGGAGTACTTATTTATTGGTTaGGAAACTAGGTCACCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: GDSEQAHAYSGGREQNMEYLFIG*ETRSPY Trigger: GTAGGGTGACCTAGTTTCCAAACCAATAAATAAGTA...CTCCATGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS-3UTR CAA 90 bp | TATCTGGAGACTCTGAACAGGCACATGCATACTCAGGGGGAAGGGAACAAAACAGAAGTTCTTAAGAAGTaGAGGACATATCGGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: YLETLNRHMHTQGEGNKTEVLKK*RTYRKR Trigger: TCTTTTCCGATATGTCCTCAACTTCTTAAGAACTTC...TGTTTTGTTCCCTTCCCCCTGAGTATGCATGTGCCTGTTCAGAGTCTCCAGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS TCA 72 bp | TGCTCCACTGTGTTTTCATTGGCCCGCTCACTCATGTaGTGCACCCGGGTGTTGCGGATCGTGAAACCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CSTVFSLARSLM*CTRVLRIVKPC Trigger: ACAAGGTTTCACGATCCGCAACACCCGGGTGCATCACATGAGTGAGCGGGCCAATGAAAACACAGTGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS CCA 72 bp | CCTTGCTCAGCTGAAACCTACTACAGGGCAAAGATCTaGGGAAGAAAGCATTCCCCTAGGGCCTTCTACATG | + |
|
Preference number: 6 (lower is better) Translates to: PCSAETYYRAKI*GRKHSPRAFYM Trigger: CATGTAGAAGGCCCTAGGGGAATGCTTTCTTCCCCAGATCTTTGCCCTGTAGTAGGTTTCAGCTGAGCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000355076.6 ENST00000479470.1 |
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| CDS TCA 72 bp | CTCCAAGCATGGAATCCGGGTAACGCGTCAATGTGGTaGGAGACGTTGTATACAAGTGTCCACCATATAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LQAWNPGNASMW*ETLYTSVHHIA Trigger: GGCTATATGGTGGACACTTGTATACAACGTCTCTCACCACATTGACGCGTTACCCGGATTCCATGCTTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479470.1 |
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| CDS GCA 72 bp | CAGAGGAGGCCAAACACCAGAAAAACTACTCGTCCTTaGTCAGCTGAAACCTACTACAGGGCAAAGATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QRRPNTRKTTRP*SAETYYRAKIW Trigger: CCAGATCTTTGCCCTGTAGTAGGTTTCAGCTGAGCAAGGACGAGTAGTTTTTCTGGTGTTTGGCCTCCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000355076.6 ENST00000479470.1 |
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| CDS CAA 72 bp | CATGTGATGCACCCGGGTGTTGCGGATCGTGAAACCTaGTTTTGTAATGTATTCCATCAGGTGGACCCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: HVMHPGVADRET*FCNVFHQVDPK Trigger: CTTAGGGTCCACCTGATGGAATACATTACAAAACAAGGTTTCACGATCCGCAACACCCGGGTGCATCACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS CAA 90 bp | ACCTTAGTGGTGATGGTTAGTTGCGTTATGATGACAGCCACTGGGTaGGAGTACTTAGAAAGCTTCCGAGTACTAGACAGCTCCACAACT | + |
|
Preference number: 6 (lower is better) Translates to: TLVVMVSCVMMTATG*EYLESFRVLDSSTT Trigger: AGTTGTGGAGCTGTCTAGTACTCGGAAGCTTTCTAAGTACTCCAACCCAGTGGCTGTCATCATAACGCAACTAACCATCACCACTAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS TCA 72 bp | CTCCAAGCATGGAATCCGGGTAACGCGTCAATGTGGTaGGAGACGTTGTATACAAGTGTCCACCTACATTTA | + |
|
Preference number: 6 (lower is better) Translates to: LQAWNPGNASMW*ETLYTSVHLHL Trigger: TAAATGTAGGTGGACACTTGTATACAACGTCTCTCACCACATTGACGCGTTACCCGGATTCCATGCTTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 ENST00000491093.5 |
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| CDS CAA 72 bp | GTGATGGTTAGTTGCGTTATGATGACAGCCACTGGGTaGGAGTACTTAGAAAGCTTCCGAGTACTAGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: VMVSCVMMTATG*EYLESFRVLDS Trigger: GCTGTCTAGTACTCGGAAGCTTTCTAAGTACTCCAACCCAGTGGCTGTCATCATAACGCAACTAACCATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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| CDS GCA 72 bp | TCTAGTAAGGAATGGACCTTAGTGGTGATGGTTAGTTaGGTTATGATGACAGCCACTGGGTTGGAGTACTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSKEWTLVVMVS*VMMTATGLEYL Trigger: TAAGTACTCCAACCCAGTGGCTGTCATCATAACGCAACTAACCATCACCACTAAGGTCCATTCCTTACTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
||
| CDS GCA 72 bp | GAGACACTGAATCAAGGGCTCAATCTGGTAAAAATCTaGTTCTTTCCGAAGCAGATCAAATTCCTTAAAATC | + |
|
Preference number: 6 (lower is better) Translates to: ETLNQGLNLVKI*FFPKQIKFLKI Trigger: GATTTTAAGGAATTTGATCTGCTTCGGAAAGAAGCAGATTTTTACCAGATTGAGCCCTTGATTCAGTGTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355076.6 ENST00000404589.8 ENST00000490264.1 |
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