Pregenerated sensors for KCTD5 (Homo sapiens)
Ensembl gene IDs: ENSG00000167977Ensembl transcript IDs: ENST00000301738.9, ENST00000564246.1
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGCGGCGCCGGGAAGCAGTaGCGACGCAGAAGCCGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LSRAWSGGVGARVRRRPGGAGKQ*RRRSRL Trigger: AAGGCGGCTTCTGCGTCGTCACTGCTTCCCGGCGCC...GCCGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR TCA 90 bp | ATGCGGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGACGCCAGCTCCCCGTaGGCCCGCAGTGGGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: MRAAVSKGIPAAPTACRADASSP*ARSGRG Trigger: GCCCCTCCCACTGCGGGCTCACGGGGAGCTGGCGTC...TGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCCGCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGCCCAGAGGCCACGACGTaGTGGACACTGACGCGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LSRAWSGGVGARVRRRPGPEATT*WTLTRL Trigger: CAGCCGCGTCAGTGTCCAGCACGTCGTGGCCTCTGG...GCCGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGAGCCGACGTGCTGGACACTaGCGCGGCTGCGGCCGCTTC | + |
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Preference number: 2 (lower is better) Translates to: GQRFLKESQQLPRHVGQSRRAGH*RGCGRF Trigger: GAAGCGGCCGCAGCCGCGTCAGTGTCCAGCACGTCG...GCTCTGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGCGCAGAGCAGACTCCCTaGCCGAGACTAGGGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LSRAWSGGVGARVRRRPGAEQTP*PRLGPG Trigger: ACCAGGCCCTAGTCTCGGTCAGGGAGTCTGCTCTGC...GCCGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR GCA 90 bp | ATGCGGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCACCCACCCGGCCGCCGTaGTCCCCCAACTTGGGGACG | + |
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Preference number: 2 (lower is better) Translates to: MRAAVSKGIPAAPTACRAPTRPP*SPNLGT Trigger: CGTCCCCAAGTTGGGGGAGCACGGCGGCCGGGTGGG...TGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCCGCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR CCA 90 bp | GACTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGGGGACGTCTGGCCTTaGACAGCTGGGCCCGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: DCPGLGQVGLEPVSEEGPGDVWP*TAGPVS Trigger: AGAGACGGGCCCAGCTGTCCAAGGCCAGACGTCCCC...CGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR CCA 90 bp | GACTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGCGTGCTCCCCCAACTTaGGGACGTCTGGCCTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: DCPGLGQVGLEPVSEEGPRAPPT*GRLALD Trigger: GTCCAAGGCCAGACGTCCCCAAGTTGGGGGAGCACG...CGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGAGCGAGGCCACGACGTGCTaGACACTGACGCGGCTGCGG | + |
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Preference number: 2 (lower is better) Translates to: GQRFLKESQQLPRHVGQSEATTC*TLTRLR Trigger: CCGCAGCCGCGTCAGTGTCCAGCACGTCGTGGCCTC...GCTCTGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR CCA 90 bp | ATGCGGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCACCCGTGAGCCCGCAGTaGGAGGGGCGAGGCGACACT | + |
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Preference number: 2 (lower is better) Translates to: MRAAVSKGIPAAPTACRAPVSPQ*EGRGDT Trigger: AGTGTCGCCTCGCCCCTCCCACTGCGGGCTCACGGG...TGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCCGCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGAGCCCGGGCTTGGTCAGGTaGGGTTGGAGCCCGTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: GQRFLKESQQLPRHVGQSPGLVR*GWSPCQ Trigger: CTGACACGGGCTCCAACCCCACCTGACCAAGCCCGG...GCTCTGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGAGCCAGGATCGAGCGGGCTaGCTGGGAGTGTCTGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: GQRFLKESQQLPRHVGQSQDRAG*LGVSAS Trigger: TGAGGCAGACACTCCCAGTCAGCCCGCTCGATCCTG...GCTCTGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGAGCGGGGCGAGGCGACACTaGTACCTCGCGCTAACGGAT | + |
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Preference number: 2 (lower is better) Translates to: GQRFLKESQQLPRHVGQSGARRH*YLALTD Trigger: ATCCGTTAGCGCGAGGTAGCAGTGTCGCCTCGCCCC...GCTCTGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGAGCGAGACTAGGGCCTGGTaGTCGGACCAGAGGCCACGA | + |
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Preference number: 2 (lower is better) Translates to: GQRFLKESQQLPRHVGQSETRAW*SDQRPR Trigger: TCGTGGCCTCTGGTCCGACCACCAGGCCCTAGTCTC...GCTCTGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGAGCACCGAGACTAGGGCCTaGTGGTCGGACCAGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: GQRFLKESQQLPRHVGQSTETRA*WSDQRP Trigger: TGGCCTCTGGTCCGACCACCAGGCCCTAGTCTCGGT...GCTCTGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR GCA 90 bp | ATGCGGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCACTGACTGGGAGTGTCTaGCTCAGTCCCACGTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: MRAAVSKGIPAAPTACRALTGSV*LSPTWH Trigger: GTGCCACGTGGGACTGAGGCAGACACTCCCAGTCAG...TGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCCGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGAGCCAAATTGAGAAGCCTTaGCTGTCCCGGGCTTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: GQRFLKESQQLPRHVGQSQIEKP*LSRAWS Trigger: TGACCAAGCCCGGGACAGTCAAGGCTTCTCAATTTG...GCTCTGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGAGCAAAGAGAGGGAAGGCTaGATAGTTATACAAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: GQRFLKESQQLPRHVGQSKEREG*IVIQRK Trigger: TTTTCTTTGTATAACTATGCAGCCTTCCCTCTCTTT...GCTCTGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR CAA 90 bp | CTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGCTGGGGACGTCTGGCCTaGGACAGCTGGGCCCGTCTC | + |
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Preference number: 3 (lower is better) Translates to: LSRAWSGGVGARVRRRPGWGRLA*DSWARL Trigger: GAGACGGGCCCAGCTGTCCAAGGCCAGACGTCCCCA...GCCGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR-3UTR CAA 90 bp | CTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGCCCGTGCTCCCCCAACTaGGGGACGTCTGGCCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: LSRAWSGGVGARVRRRPGPCSPN*GTSGLG Trigger: TCCAAGGCCAGACGTCCCCAAGTTGGGGGAGCACGG...GCCGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| 3UTR CCA 72 bp | TTGGAGCCCGTGTCAGAAGAAGGCCCGGCCTCGGAATaGCGCCGGGAAGCAGTGACGACGCAGAAGCCGCCT | + |
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Preference number: 3 (lower is better) Translates to: LEPVSEEGPASE*RREAVTTQKPP Trigger: AGGCGGCTTCTGCGTCGTCACTGCTTCCCGGCGCCATTCCGAGGCCGGGCCTTCTTCTGACACGGGCTCCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR TCA 90 bp | GACTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGACGCCAGCTCCCCGTaGGCCCGCAGTGGGAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: DCPGLGQVGLEPVSEEGPDASSP*ARSGRG Trigger: GCCCCTCCCACTGCGGGCTCACGGGGAGCTGGCGTC...CGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR GCA 90 bp | GACTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGCCCACCCGGCCGCCGTaGTCCCCCAACTTGGGGACG | + |
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Preference number: 4 (lower is better) Translates to: DCPGLGQVGLEPVSEEGPPTRPP*SPNLGT Trigger: CGTCCCCAAGTTGGGGGAGCACGGCGGCCGGGTGGG...CGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAGTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR TCA 90 bp | GACTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGCGACGTGCTGGACACTaGCGCGGCTGCGGCCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: DCPGLGQVGLEPVSEEGPRRAGH*RGCGRF Trigger: GAAGCGGCCGCAGCCGCGTCAGTGTCCAGCACGTCG...CGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CCA 90 bp | GACTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGGCCCGGCCTCGGAATaGCGCCGGGAAGCAGTGACG | + |
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Preference number: 4 (lower is better) Translates to: DCPGLGQVGLEPVSEEGPGPASE*RREAVT Trigger: CGTCACTGCTTCCCGGCGCCATTCCGAGGCCGGGCC...CGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR TCA 90 bp | CTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGCGGCGTGACAAGGCACTaGCAGACGCCAGCTCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: LSRAWSGGVGARVRRRPGGVTRH*QTPAPR Trigger: ACGGGGAGCTGGCGTCTGTCAGTGCCTTGTCACGCC...GCCGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CCA 90 bp | CTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGCCCGGGCTTGGTCAGGTaGGGTTGGAGCCCGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LSRAWSGGVGARVRRRPGPGLVR*GWSPCQ Trigger: CTGACACGGGCTCCAACCCCACCTGACCAAGCCCGG...GCCGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR TCA 90 bp | CTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGCCAGGATCGAGCGGGCTaGCTGGGAGTGTCTGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LSRAWSGGVGARVRRRPGQDRAG*LGVSAS Trigger: TGAGGCAGACACTCCCAGTCAGCCCGCTCGATCCTG...GCCGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR GCA 90 bp | CTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGCGTCGGGCAGAGCCCGTaGAGGTCGAGTGAAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LSRAWSGGVGARVRRRPGVGQSP*RSSEVP Trigger: TGGGACTTCACTCGACCTGCACGGGCTCTGCCCGAC...GCCGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR GCA 90 bp | GACTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGTCAGAGCCTCTGACCTaGAGGCGGGAGGCCGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: DCPGLGQVGLEPVSEEGPSEPLT*RREAGG Trigger: ACCACCGGCCTCCCGCCTGCAGGTCAGAGGCTCTGA...CGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CCA 90 bp | GACTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGTCTCGCTGGGCTCGCTaGCCGTACCGTACGGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: DCPGLGQVGLEPVSEEGPSRWAR*PYRTGC Trigger: ACACCCCGTACGGTACGGCCAGCGAGCCCAGCGAGA...CGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CCA 90 bp | CTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGCCGTGCTCCCCCAACTTaGGGACGTCTGGCCTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LSRAWSGGVGARVRRRPGRAPPT*GRLALD Trigger: GTCCAAGGCCAGACGTCCCCAAGTTGGGGGAGCACG...GCCGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CCA 90 bp | CTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGCGAGACTAGGGCCTGGTaGTCGGACCAGAGGCCACGA | + |
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Preference number: 4 (lower is better) Translates to: LSRAWSGGVGARVRRRPGETRAW*SDQRPR Trigger: TCGTGGCCTCTGGTCCGACCACCAGGCCCTAGTCTC...GCCGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CCA 90 bp | CTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGCACCGAGACTAGGGCCTaGTGGTCGGACCAGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LSRAWSGGVGARVRRRPGTETRA*WSDQRP Trigger: TGGCCTCTGGTCCGACCACCAGGCCCTAGTCTCGGT...GCCGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CCA 90 bp | GGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGAGCCCCGTGAGCCCGCAGTaGGAGGGGCGAGGCGACACT | + |
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Preference number: 4 (lower is better) Translates to: GQRFLKESQQLPRHVGQSPVSPQ*EGRGDT Trigger: AGTGTCGCCTCGCCCCTCCCACTGCGGGCTCACGGG...GCTCTGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CCA 90 bp | GGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGAGCCGGAAGCAAAGCGCTTaGAGCCCGCCCTGCACGCCG | + |
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Preference number: 4 (lower is better) Translates to: GQRFLKESQQLPRHVGQSRKQSA*SPPCTP Trigger: CGGCGTGCAGGGCGGGCTCCAAGCGCTTTGCTTCCG...GCTCTGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR GCA 90 bp | GACTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGCTGACTGGGAGTGTCTaGCTCAGTCCCACGTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: DCPGLGQVGLEPVSEEGPLTGSV*LSPTWH Trigger: GTGCCACGTGGGACTGAGGCAGACACTCCCAGTCAG...CGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR GCA 90 bp | ATGCGGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGCTTGGAGCCCGCCCTaGACGCCGAGTCCCCAGACT | + |
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Preference number: 4 (lower is better) Translates to: MRAAVSKGIPAAPTACRAAWSPP*TPSPQT Trigger: AGTCTGGGGACTCGGCGTGCAGGGCGGGCTCCAAGC...TGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCCGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CCA 90 bp | ATGCGGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGAGGCCACGACGTGCTaGACACTGACGCGGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: MRAAVSKGIPAAPTACRAEATTC*TLTRLR Trigger: CCGCAGCCGCGTCAGTGTCCAGCACGTCGTGGCCTC...TGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCCGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CCA 90 bp | ATGCGGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGGGGACGTCTGGCCTTaGACAGCTGGGCCCGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: MRAAVSKGIPAAPTACRAGDVWP*TAGPVS Trigger: AGAGACGGGCCCAGCTGTCCAAGGCCAGACGTCCCC...TGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCCGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR GCA 90 bp | ATGCGGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGGGGCGAGGCGACACTaGTACCTCGCGCTAACGGAT | + |
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Preference number: 4 (lower is better) Translates to: MRAAVSKGIPAAPTACRAGARRH*YLALTD Trigger: ATCCGTTAGCGCGAGGTAGCAGTGTCGCCTCGCCCC...TGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCCGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CCA 90 bp | ATGCGGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCATCTTGGCCTTCTCGCTaGGCTCGCTGGCCGTACCGT | + |
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Preference number: 4 (lower is better) Translates to: MRAAVSKGIPAAPTACRASWPSR*ARWPYR Trigger: ACGGTACGGCCAGCGAGCCCAGCGAGAAGGCCAAGA...TGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCCGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CCA 90 bp | GACTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGTTGGTCAGGTGGGGTTaGAGCCCGTGTCAGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: DCPGLGQVGLEPVSEEGPLVRWG*SPCQKK Trigger: CTTCTTCTGACACGGGCTCCAACCCCACCTGACCAA...CGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR TCA 90 bp | GACTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGCAAATTGAGAAGCCTTaGCTGTCCCGGGCTTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: DCPGLGQVGLEPVSEEGPQIEKP*LSRAWS Trigger: TGACCAAGCCCGGGACAGTCAAGGCTTCTCAATTTG...CGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR TCA 90 bp | GGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGAGCTGGCAAAGAGGAGGATaGGGCCTAGGCAGGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: GQRFLKESQQLPRHVGQSWQRGG*GLGRKS Trigger: AGACTTCCTGCCTAGGCCTCATCCTCCTCTTTGCCA...GCTCTGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR GCA 90 bp | GACTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGTGCTTCACAGGCACCTaGGATGTTTTGCTGTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: DCPGLGQVGLEPVSEEGPCFTGT*DVLLSR Trigger: ACGAGACAGCAAAACATCGCAGGTGCCTGTGAAGCA...CGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CCA 90 bp | ATGCGGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCACTGCACAGTACCCCTTaGGAAGCCGGAGTTCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: MRAAVSKGIPAAPTACRALHSTP*EAGVPE Trigger: TTCCGGAACTCCGGCTTCCCAAGGGGTACTGTGCAG...TGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCCGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR TCA 90 bp | ATGCGGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCATGTTTCATCCTTGTCTaGGTCCAGGTCGGGATCGGC | + |
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Preference number: 4 (lower is better) Translates to: MRAAVSKGIPAAPTACRACFILV*VQVGIG Trigger: GCCGATCCCGACCTGGACTCAGACAAGGATGAAACA...TGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCCGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR TCA 90 bp | ATGCGGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAAAGAGGAGCCGATGCTaGCCAACTGCTCGAACTTCC | + |
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Preference number: 4 (lower is better) Translates to: MRAAVSKGIPAAPTACRAKRSRC*PTARTS Trigger: GGAAGTTCGAGCAGTTGGTCAGCATCGGCTCCTCTT...TGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCCGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CCA 90 bp | GGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGAGCGTTCTTGCAAAATCTTaGCCTTCTCGCTGGGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: GQRFLKESQQLPRHVGQSVLAKS*PSRWAR Trigger: GCGAGCCCAGCGAGAAGGCCAAGATTTTGCAAGAAC...GCTCTGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CCA 90 bp | GGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGAGCACGCGGCAAGCCCTGTaGGCATTTCCAGAGGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: GQRFLKESQQLPRHVGQSTRQAL*AFPEEK Trigger: TTTTTCCTCTGGAAATGCCCACAGGGCTTGCCGCGT...GCTCTGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR GCA 90 bp | ATGCGGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCACTTGAGCCTCGTTCTTaGAAAATCTTGGCCTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: MRAAVSKGIPAAPTACRALEPRS*KILAFS Trigger: CGAGAAGGCCAAGATTTTGCAAGAACGAGGCTCAAG...TGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCCGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR GCA 90 bp | ATGCGGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAAAAGAGAGGGAAGGCTaGATAGTTATACAAAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: MRAAVSKGIPAAPTACRAKEREG*IVIQRK Trigger: TTTTCTTTGTATAACTATGCAGCCTTCCCTCTCTTT...TGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCCGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CAA 90 bp | GACTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGCCGGAAGCAAAGCGCTaGGAGCCCGCCCTGCACGCC | + |
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Preference number: 5 (lower is better) Translates to: DCPGLGQVGLEPVSEEGPPEAKR*EPALHA Trigger: GGCGTGCAGGGCGGGCTCCAAGCGCTTTGCTTCCGG...CGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CAA 90 bp | CTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGCTTGAGTCGGACCCACTaGGACACGCTGCCAGGGCGC | + |
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Preference number: 5 (lower is better) Translates to: LSRAWSGGVGARVRRRPGLSRTH*DTLPGR Trigger: GCGCCCTGGCAGCGTGTCCAAGTGGGTCCGACTCAA...GCCGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CAA 90 bp | ATGCGGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCATGGGGACGTCTGGCCTaGGACAGCTGGGCCCGTCTC | + |
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Preference number: 5 (lower is better) Translates to: MRAAVSKGIPAAPTACRAWGRLA*DSWARL Trigger: GAGACGGGCCCAGCTGTCCAAGGCCAGACGTCCCCA...TGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCCGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CAA 90 bp | GACTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGGCGCCTGTTTCATCCTaGTCTGAGTCCAGGTCGGGA | + |
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Preference number: 5 (lower is better) Translates to: DCPGLGQVGLEPVSEEGPAPVSS*SESRSG Trigger: TCCCGACCTGGACTCAGACAAGGATGAAACAGGCGC...CGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CAA 90 bp | GACTGTCCCGGGCTTGGTCAGGTGGGGTTGGAGCCCGTGTCAGAAGAAGGCCCGCTTGGTCAGGTGGGGTaGGAGCCCGTGTCAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: DCPGLGQVGLEPVSEEGPLGQVG*EPVSEE Trigger: TTCTTCTGACACGGGCTCCAACCCCACCTGACCAAG...CGGGCCTTCTTCTGACACGGGCTCCAACCCCACCTGACCAAGCCCGGGACAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CAA 90 bp | ATGCGGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCATTGACTGTCCCGGGCTaGGTCAGGTGGGGTTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: MRAAVSKGIPAAPTACRALTVPG*VRWGWS Trigger: GCTCCAACCCCACCTGACCAAGCCCGGGACAGTCAA...TGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCCGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS-3UTR CAA 90 bp | GGGCAGCGGTTTCTAAAGGAATCCCAGCAGCTCCCACGGCATGTCGGGCAGAGCCGTTCTTGCAAAATCTaGGCCTTCTCGCTGGGCTCG | + |
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Preference number: 5 (lower is better) Translates to: GQRFLKESQQLPRHVGQSRSCKI*AFSLGS Trigger: CGAGCCCAGCGAGAAGGCCAAGATTTTGCAAGAACG...GCTCTGCCCGACATGCCGTGGGAGCTGCTGGGATTCCTTTAGAAACCGCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301738.9 |
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| CDS GCA 72 bp | CCTGGGAGTGATGGTGAGCCACCAGGGCCGCCCGCCTaGATGGAGCTGCTCCCCAGTGGGCGGGGTGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: PGSDGEPPGPPA*MELLPSGRGGP Trigger: GGGGCCACCCCGCCCACTGGGGAGCAGCTCCATGCAGGCGGGCGGCCCTGGTGGCTCACCATCACTCCCAGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564246.1 |
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