RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCTD20 (Homo sapiens)

Ensembl gene IDs: ENSG00000112078

Ensembl transcript IDs: ENST00000265344.8, ENST00000373731.7, ENST00000443316.2, ENST00000449081.6, ENST00000460983.1, ENST00000481911.5, ENST00000483557.5, ENST00000498267.5, ENST00000536244.5

Found 636 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTaGCTGCAGGCATCCCAGGTGAGATGGGCTCCAACAAGGAGTAGA +
Preference number: 1 (lower is better)
Translates to: EACLLLKVRQITREG*LQASQVRWAPTRSR
Trigger: TCTACTCCTTGTTGGAGCCCATCTCACCTGGGATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
3UTR TCA 90 bp AAACATACAGAGAAAAGTCCTGCACTAGGACAGGGACTGTGCAGATaGTGCTTCCCACCCAGCTTCACTCCATGTACCCCATGCTGGCAC +
Preference number: 1 (lower is better)
Translates to: KHTEKSPALGQGLCR*CFPPSFTPCTPCWH
Trigger: GTGCCAGCATGGGGTACATGGAGTGAAGCTGGGTGGGAAGCATCATCTGCACAGTCCCTGTCCTAGTGCAGGACTTTTCTCTGTATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR TCA 90 bp TCTCCTGGTCCTCCAAGACATCATCTCCAGCAGCTACCAGATTCGTaGGGGATTTGCTTCGAACACACTGGAAATCCACATGGCGACTCT +
Preference number: 1 (lower is better)
Translates to: SPGPPRHHLQQLPDS*GICFEHTGNPHGDS
Trigger: AGAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTGGTAGCTGCTGGAGATGATGTCTTGGAGGACCAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR CCA 90 bp ATTAATAGCCATGGAGAACAGGAGGGAAGATGGTTCAGCACTGTGTaGGCTGAGGAGGGTGATCTGGGTGATCATGCACTGATAACAGAG +
Preference number: 1 (lower is better)
Translates to: INSHGEQEGRWFSTV*AEEGDLGDHALITE
Trigger: CTCTGTTATCAGTGCATGATCACCCAGATCACCCTCCTCAGCCCACACAGTGCTGAACCATCTTCCCTCCTGTTCTCCATGGCTATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR CCA 90 bp CTACAAATAATCCTAACCCTTAATCCAGGCCATTGGCCTTGCAAATaGATGCCAATAGTCATCAGGTGGGGGATAGCTCAGTTTAACCAC +
Preference number: 1 (lower is better)
Translates to: LQIILTLNPGHWPCK*MPIVIRWGIAQFNH
Trigger: GTGGTTAAACTGAGCTATCCCCCACCTGATGACTATTGGCATCCATTTGCAAGGCCAATGGCCTGGATTAAGGGTTAGGATTATTTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR TCA 90 bp AGTCTTGACTTCCTTTCCTGCTTTTGCAGTTACACAAAGACTCAATaGACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: SLDFLSCFCSYTKTQ*TAPDPNFSSYQGCC
Trigger: GCAGCAGCCCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAACTGCAAAAGCAGGAAAGGAAGTCAAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
3UTR CCA 90 bp AATCCAGGCCATTGGCCTTGCAAATGGATGCCAATAGTCATCAGGTaGGGGATAGCTCAGTTTAACCACTTACTACATTCTAGTGAAGAA +
Preference number: 1 (lower is better)
Translates to: NPGHWPCKWMPIVIR*GIAQFNHLLHSSEE
Trigger: TTCTTCACTAGAATGTAGTAAGTGGTTAAACTGAGCTATCCCCCACCTGATGACTATTGGCATCCATTTGCAAGGCCAATGGCCTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR TCA 90 bp CCATTCTTTCAAATATTTTTCCAGGGCTTAGGGGAAACCATTAAATaGTCTGACTTAACACTGTCGTCTTGCCCTCCCTCCAACTCCTCA +
Preference number: 1 (lower is better)
Translates to: PFFQIFFQGLGETIK*SDLTLSSCPPSNSS
Trigger: TGAGGAGTTGGAGGGAGGGCAAGACGACAGTGTTAAGTCAGATCATTTAATGGTTTCCCCTAAGCCCTGGAAAAATATTTGAAAGAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR GCA 90 bp CTAGTGAAGAACAGAGCATTAATTTCCACAGTGATGCTAGTCACATaGAGAGAACGTAAGAACACTTTTTCAGCCCTGGAAAGAGCTTTC +
Preference number: 1 (lower is better)
Translates to: LVKNRALISTVMLVT*RERKNTFSALERAF
Trigger: GAAAGCTCTTTCCAGGGCTGAAAAAGTGTTCTTACGTTCTCTGCATGTGACTAGCATCACTGTGGAAATTAATGCTCTGTTCTTCACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR CCA 90 bp TTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTaGATGATTATGACTAGGACAGTCATTAAATGGAATCGAGTAGCC +
Preference number: 1 (lower is better)
Translates to: FSPGKSFQHLPGFYL*MIMTRTVIKWNRVA
Trigger: GGCTACTCGATTCCATTTAATGACTGTCCTAGTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR TCA 90 bp CCAACTCCTCAGTGGCAAATGTTTCCTCATCAAAACAGCATGATATaGTGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTA +
Preference number: 1 (lower is better)
Translates to: PTPQWQMFPHQNSMI*CRCKLKILNFRFGL
Trigger: TAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCATCATATCATGCTGTTTTGATGAGGAAACATTTGCCACTGAGGAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR GCA 90 bp TGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTaGCGATTTCTCTGGCTAAAATATCAACAGCCTGGCTTGCTTATT +
Preference number: 1 (lower is better)
Translates to: CKLKILNFRFGLILA*RFLWLKYQQPGLLI
Trigger: AATAAGCAAGCCAGGCTGTTGATATTTTAGCCAGAGAAATCGGCAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGCCAACTGGCCTGATTTaGAGAGGTCCTTCTACTTGC +
Preference number: 2 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGEPTGLI*RGPSTC
Trigger: GCAAGTAGAAGGACCTCTCCAAATCAGGCCAGTTGG...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGTACTTCTTCATCCCCTaGCAGAGGCATGGACTTACT +
Preference number: 2 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGEYFFIP*QRHGLT
Trigger: AGTAAGTCCATGCCTCTGGCAGGGGATGAAGAAGTA...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGGTAGCTAATTACCAGTaGGTACTTCTTCATCCCCTG +
Preference number: 2 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGEVANYQ*VLLHPL
Trigger: CAGGGGATGAAGAAGTACTCACTGGTAATTAGCTAC...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATATCACGAGGGAGGGCTaGCTGCAGGCATCCCAGGTG +
Preference number: 2 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDITREG*LQASQV
Trigger: CACCTGGGATGCCTGCAGCCAGCCCTCCCTCGTGAT...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTGCTCTAGGTGGAGGGTaGTGGGAGGGGCATAGAAAT +
Preference number: 2 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSALGGG*WEGHRN
Trigger: ATTTCTATGCCCCTCCCACCACCCTCCACCTAGAGC...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGATCACGAGGGAGGGCTaGCTGCAGGCATCCCAGGTG +
Preference number: 2 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGITREG*LQASQV
Trigger: CACCTGGGATGCCTGCAGCCAGCCCTCCCTCGTGAT...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGCTTTCAGATTTGGGGTaGTCAACTGTTAAGTATTCC +
Preference number: 2 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGELSDLG*STVKYS
Trigger: GGAATACTTAACAGTTGAGCACCCCAAATCTGAAAG...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGACAGTGTCAAGTATATaGCATACTTCATACCTGGCA +
Preference number: 2 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGETVSSI*HTSYLA
Trigger: TGCCAGGTATGAAGTATGGCATATACTTGACACTGT...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGACACTTTTTCAGCCCTaGAAAGAGCTTTCAACATCT +
Preference number: 2 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGETLFQP*KELSTS
Trigger: AGATGTTGAAAGCTCTTTCCAGGGCTGAAAAAGTGT...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTCTAGGTGGAGGGTGGTaGGAGGGGCATAGAAATAAA +
Preference number: 2 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSLGGGW*EGHRNK
Trigger: TTTATTTCTATGCCCCTCCCACCACCCTCCACCTAG...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTATCAGAAGGAACCTGTaGTCCCAGCTTTTCCTTCAG +
Preference number: 2 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSIRRNL*SQLFLQ
Trigger: CTGAAGGAAAAGCTGGGATCACAGGTTCCTTCTGAT...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCCTAGTTCTTTCCAGATaGAATTTGGGTGCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: MSPTQGETNHEGGLAAGILVLSR*NLGAEA
Trigger: GGCCTCTGCACCCAAATTGCATCTGGAAAGAACTAG...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGTTTTGCAGAATGGCCTaGCCCTGGGACTGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGFCRMA*PWDWSR
Trigger: CCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAA...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCGTCTCCTACTCAAGGTaGGACAAATCACGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSVSYSR*DKSRGR
Trigger: CCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGAC...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTGTAGCTAATTACCAGTaGGTACTTCTTCATCCCCTG +
Preference number: 2 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSVANYQ*VLLHPL
Trigger: CAGGGGATGAAGAAGTACTCACTGGTAATTAGCTAC...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCGCATCCCAGGTGAGATaGGCTCCAACAAGGAGTAGA +
Preference number: 2 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSASQVR*APTRSR
Trigger: TCTACTCCTTGTTGGAGCCCATCTCACCTGGGATGC...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR CAA 90 bp TCCTCCAAGACATCATCTCCAGCAGCTACCAGATTCGTGAGGGATTaGCTTCGAACACACTGGAAATCCACATGGCGACTCTTCCCTTCT +
Preference number: 2 (lower is better)
Translates to: SSKTSSPAATRFVRD*LRTHWKSTWRLFPS
Trigger: AGAAGGGAAGAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTGGTAGCTGCTGGAGATGATGTCTTGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR TCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTTACACAAAGACTCAATaGACAGCACCAGACCCAAAT +
Preference number: 2 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSYTKTQ*TAPDPN
Trigger: ATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTA...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTTTTGGACATTCTGAATaGGACCCTAGTTCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSFGHSE*DPSSFQ
Trigger: CTGGAAAGAACTAGGGTCTCATTCAGAATGTCCAAA...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTTTCCTACCCAATGTGTaGGCAGCTATTAGGCTATTT +
Preference number: 2 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSFLPNV*AAIRLF
Trigger: AAATAGCCTAATAGCTGCTCACACATTGGGTAGGAA...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp CTCCTGGTCCTCCAAGACATCATCTCCAGCAGCTACCAGATTCGTGAGGGATTTGTCAGCACAACAATGTaGCACTCTCGTTCTCCTTTC +
Preference number: 2 (lower is better)
Translates to: LLVLQDIISSSYQIREGFVSTTM*HSRSPF
Trigger: GAAAGGAGAACGAGAGTGCCACATTGTTGTGCTGAC...AAATCCCTCACGAATCTGGTAGCTGCTGGAGATGATGTCTTGGAGGACCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR CCA 90 bp CTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGAAGCTTGCTTCGAACACACTaGAAATCCACATGGCGACTC +
Preference number: 2 (lower is better)
Translates to: LQQGVDPQLALILKVVRSLLRTH*KSTWRL
Trigger: GAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAA...GCTTCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR TCA 90 bp GCTACCAGATTCGTGAGGGATTTGCTTCGAACACACTGGAAATCCACATGGCGACCCATGACATCTGGATaGAGGGGCGTTGTACATAAT +
Preference number: 2 (lower is better)
Translates to: ATRFVRDLLRTHWKSTWRPMTSG*RGVVHN
Trigger: ATTATGTACAACGCCCCTTCATCCAGATGTCATGGG...TCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTGGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR TCA 90 bp GGGCATTTAGCCGGTCAAGTTCATCCACTTGGGGTGGGTGATGCATTAATATCTCAGCTACCAGATTCGTaGGGGATTTGCTTCGAACAC +
Preference number: 2 (lower is better)
Translates to: GHLAGQVHPLGVGDALISQLPDS*GICFEH
Trigger: GTGTTCGAAGCAAATCCCTCACGAATCTGGTAGCTG...AGATATTAATGCATCACCCACCCCAAGTGGATGAACTTGACCGGCTAAATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR TCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATGGCATGGAAGTCTACTaGGAAGCAGAAAAGAAGCAC +
Preference number: 2 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDGMEVY*EAEKKH
Trigger: GTGCTTCTTTTCTGCTTCTCAGTAGACTTCCATGCC...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATTCCACAGCAATGTGCTaGTCCAGAGTGTTAAGACCT +
Preference number: 2 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDSTAMC*SRVLRP
Trigger: AGGTCTTAACACTCTGGAGCAGCACATTGCTGTGGA...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATTACAGAGAAAAGTCCTaGACTAGGACAGGGACTGTG +
Preference number: 2 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDYREKS*TRTGTV
Trigger: CACAGTCCCTGTCCTAGTGCAGGACTTTTCTCTGTA...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTCTTTCAGATTTGGGGTaGTCAACTGTTAAGTATTCC +
Preference number: 2 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSLSDLG*STVKYS
Trigger: GGAATACTTAACAGTTGAGCACCCCAAATCTGAAAG...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCCAGGCCATTGGCCTTaGAAATGGATGCCAATAGTC +
Preference number: 2 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGPGHWP*KWMPIV
Trigger: GACTATTGGCATCCATTTGCAAGGCCAATGGCCTGG...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGAGAATGGCCTGCCCCTaGGACTGGAGCAGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLRMACP*DWSRLG
Trigger: CCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCT...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp TTAGCCGGTCAAGTTCATCCACTTGGGGTGGGTGATGCATTAATATCTCCTGGTGTACATAATTATAGATaGCTTCAGACCGGCCGCCAG +
Preference number: 2 (lower is better)
Translates to: LAGQVHPLGVGDALISPGVHNYR*LQTGRQ
Trigger: CTGGCGGCCGGTCTGAAGTCATCTATAATTATGTAC...ACCAGGAGATATTAATGCATCACCCACCCCAAGTGGATGAACTTGACCGGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR TCA 90 bp GGGCATTTAGCCGGTCAAGTTCATCCACTTGGGGTGGGTGATGCATTAATATCTCCCATGACATCTGGATaGAGGGGCGTTGTACATAAT +
Preference number: 2 (lower is better)
Translates to: GHLAGQVHPLGVGDALISPMTSG*RGVVHN
Trigger: ATTATGTACAACGCCCCTTCATCCAGATGTCATGGG...AGATATTAATGCATCACCCACCCCAAGTGGATGAACTTGACCGGCTAAATGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR TCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTAGTCTCCTACTCAAGGTaGGACAAATCACGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLVSYSR*DKSRGR
Trigger: CCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGAC...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATCAGGGACTGTGCAGATaGTGCTTCCCACCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDQGLCR*CFPPSF
Trigger: GAAGCTGGGTGGGAAGCATCATCTGCACAGTCCCTG...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATCAGGGACTGTGCAGATaGTGCTTCCCACCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYQGLCR*CFPPSF
Trigger: GAAGCTGGGTGGGAAGCATCATCTGCACAGTCCCTG...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGTCCACAGCAATGTGCTaGTCCAGAGTGTTAAGACCT +
Preference number: 2 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGSTAMC*SRVLRP
Trigger: AGGTCTTAACACTCTGGAGCAGCACATTGCTGTGGA...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGACTCCATGTACCCCATaGTGGCACTCTTATGAGTCT +
Preference number: 2 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGTPCTP*WHSYES
Trigger: AGACTCATAAGAGTGCCAGCATGGGGTACATGGAGT...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp GCTACCAGATTCGTGAGGGATTTGCTTCGAACACACTGGAAATCCACATGGCGATTTTCCCATGACATCTaGATGAAGGGGCGTTGTACA +
Preference number: 2 (lower is better)
Translates to: ATRFVRDLLRTHWKSTWRFSHDI*MKGRCT
Trigger: TGTACAACGCCCCTTCATCCAGATGTCATGGGAAAA...TCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR TCA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGTGCAGGCATCCCAGGTaGGATGGGCTCCAACAAGGA +
Preference number: 2 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLCRHPR*DGLQQG
Trigger: TCCTTGTTGGAGCCCATCTCACCTGGGATGCCTGCA...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATTACACAAAGACTCAATaGACAGCACCAGACCCAAAT +
Preference number: 2 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDYTKTQ*TAPDPN
Trigger: ATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTA...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp GCTACCAGATTCGTGAGGGATTTGCTTCGAACACACTGGAAATCCACATGGCGATACACAAAGACTCAATaGACAGCACCAGACCCAAAT +
Preference number: 2 (lower is better)
Translates to: ATRFVRDLLRTHWKSTWRYTKTQ*TAPDPN
Trigger: ATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTA...TCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTGGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481911.5
3UTR-3UTR CCA 90 bp TTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGCCCATTGGTGGAGGGTaGTCTTCATCCCAGTCCACA +
Preference number: 2 (lower is better)
Translates to: LHKDSMNSTRPKFFKLPGPIGGG*SSSQST
Trigger: TGTGGACTGGGATGAAGACCACCCTCCACCAATGGG...CCCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481911.5
3UTR-3UTR CCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATAGGACAGTCATTAAATaGAATCGAGTAGCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDRTVIK*NRVASP
Trigger: AGGAGAGGCTACTCGATTCCATTTAATGACTGTCCT...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGTCAAACCCCACAGGTTaGGGTCAAATGCATGTTAAC +
Preference number: 2 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGSNPTG*GQMHVN
Trigger: GTTAACATGCATTTGACCCCAACCTGTGGGGTTTGA...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCCTCCAACTCCTCAGTaGCAAATGTTTCCTCATCAA +
Preference number: 2 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGPPTPQ*QMFPHQ
Trigger: TTGATGAGGAAACATTTGCCACTGAGGAGTTGGAGG...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGTTTGGACATTCTGAATaGGACCCTAGTTCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGFGHSE*DPSSFQ
Trigger: CTGGAAAGAACTAGGGTCTCATTCAGAATGTCCAAA...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGCAGGGACTGTGCAGATaGTGCTTCCCACCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLQGLCR*CFPPSF
Trigger: GAAGCTGGGTGGGAAGCATCATCTGCACAGTCCCTG...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp GCTACCAGATTCGTGAGGGATTTGCTTCGAACACACTGGAAATCCACATGGCGACTTGACTTCCTTTCCTaGTTTTGCAGTTACACAAAG +
Preference number: 2 (lower is better)
Translates to: ATRFVRDLLRTHWKSTWRLDFLS*FCSYTK
Trigger: CTTTGTGTAACTGCAAAAGCAGGAAAGGAAGTCAAG...TCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTGGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481911.5
3UTR-3UTR CCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGCATCCCAGGTGAGATaGGCTCCAACAAGGAGTAGA +
Preference number: 2 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRASQVR*APTRSR
Trigger: TCTACTCCTTGTTGGAGCCCATCTCACCTGGGATGC...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
3UTR-3UTR CCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATACACTTTTTCAGCCCTaGAAAGAGCTTTCAACATCT +
Preference number: 2 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDTLFQP*KELSTS
Trigger: AGATGTTGAAAGCTCTTTCCAGGGCTGAAAAAGTGT...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCGTCTCCTACTCAAGGTaGGACAAATCACGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSVSYSR*DKSRGR
Trigger: CCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGAC...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGAGAGGTCCTTCTACTTaGATTGTGAGTTTCATTCCA +
Preference number: 2 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGRGPST*IVSFIP
Trigger: TGGAATGAAACTCACAATGCAAGTAGAAGGACCTCT...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATGTTTCTGTGAGGTCCTaGTTTTGCAGAATGGCCTGC +
Preference number: 2 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYVSVRS*FCRMAC
Trigger: GCAGGCCATTCTGCAAAAGCAGGACCTCACAGAAAC...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATCCAACTGGCCTGATTTaGAGAGGTCCTTCTACTTGC +
Preference number: 2 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYPTGLI*RGPSTC
Trigger: GCAAGTAGAAGGACCTCTCCAAATCAGGCCAGTTGG...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGATATCTAAGGTCTCCTaGACATATCCACAGCAATGT +
Preference number: 2 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGISKVS*TYPQQC
Trigger: ACATTGCTGTGGATATGTCCAGGAGACCTTAGATAT...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGACACTTTTTCAGCCCTaGAAAGAGCTTTCAACATCT +
Preference number: 2 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGTLFQP*KELSTS
Trigger: AGATGTTGAAAGCTCTTTCCAGGGCTGAAAAAGTGT...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGTACTTCTTCATCCCCTaGCAGAGGCATGGACTTACT +
Preference number: 2 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRYFFIP*QRHGLT
Trigger: AGTAAGTCCATGCCTCTGGCAGGGGATGAAGAAGTA...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
3UTR-3UTR CCA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTATATCTAAGGTCTCCTaGACATATCCACAGCAATGT +
Preference number: 2 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFISKVS*TYPQQC
Trigger: ACATTGCTGTGGATATGTCCAGGAGACCTTAGATAT...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACCCATGTACCCCATGCTaGCACTCTTATGAGTCTTTC +
Preference number: 2 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDPCTPC*HSYESF
Trigger: GAAAGACTCATAAGAGTGCCAGCATGGGGTACATGG...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGAAAATATCAACAGCCTaGCTTGCTTATTTAGGCACT +
Preference number: 2 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGKISTA*LAYLGT
Trigger: AGTGCCTAAATAAGCAAGCCAGGCTGTTGATATTTT...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR CAA 90 bp TGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTaGGCTTGCCGATTTCTCTGGCTAAAATATCAACAGCCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: CRCKLKILNFRFGLI*ACRFLWLKYQQPGL
Trigger: CAAGCCAGGCTGTTGATATTTTAGCCAGAGAAATCGGCAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAAATAACCCAACTGGCCTaGTTTGGAGAGGTCCTTCTA +
Preference number: 2 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQITQLA*FGEVLL
Trigger: TAGAAGGACCTCTCCAAATCAGGCCAGTTGGGTTAT...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACCTCTCCTACACAGGATaGGCATCCCAAATCCAAAAA +
Preference number: 2 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDLSYTG*ASQIQK
Trigger: TTTTTGGATTTGGGATGCTCATCCTGTGTAGGAGAG...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTTTCCTTTCCTGCTTTTaGAGTTACACAAAGACTCAA +
Preference number: 2 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFFLSCF*SYTKTQ
Trigger: TTGAGTCTTTGTGTAACTGCAAAAGCAGGAAAGGAA...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
3UTR-3UTR GCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTACTTGACTTCCTTTCCTaGTTTTGCAGTTACACAAAG +
Preference number: 2 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLLDFLS*FCSYTK
Trigger: CTTTGTGTAACTGCAAAAGCAGGAAAGGAAGTCAAG...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTATGGTCCCTAGCATTTTaGATAAGAGATACTCAACCT +
Preference number: 2 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLWSLAF*IRDTQP
Trigger: AGGTTGAGTATCTCTTATCCAAAATGCTAGGGACCA...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGGTAGCTAATTACCAGTaGGTACTTCTTCATCCCCTG +
Preference number: 2 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLVANYQ*VLLHPL
Trigger: CAGGGGATGAAGAAGTACTCACTGGTAATTAGCTAC...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGATAACCCAACTGGCCTaGTTTGGAGAGGTCCTTCTA +
Preference number: 2 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLITQLA*FGEVLL
Trigger: TAGAAGGACCTCTCCAAATCAGGCCAGTTGGGTTAT...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACTTCCTACCCAATGTGTaGGCAGCTATTAGGCTATTT +
Preference number: 2 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDFLPNV*AAIRLF
Trigger: AAATAGCCTAATAGCTGCTCACACATTGGGTAGGAA...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATCCCTTCCTTTGGGGATaGCATTGGTATAATATTCCT +
Preference number: 2 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYPFLWG*HWYNIP
Trigger: AGGAATATTATACCAATGTCATCCCCAAAGGAAGGG...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTCTAGTTCTTTCCAGATaGAATTTGGGTGCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPLVLSR*NLGAEA
Trigger: GGCCTCTGCACCCAAATTGCATCTGGAAAGAACTAG...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATGGGTACTGCATATTGTaGAGTAAATCTGGCTTGCTT +
Preference number: 2 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYGYCIL*SKSGLL
Trigger: AAGCAAGCCAGATTTACTGCACAATATGCAGTACCC...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CCA 90 bp TTTAGGCCCCGTTCCTTTAACACTGTTTTTGCAACATCCCTATTCTCAATATATGTCAGCACAACAATGTaGCACTCTCGTTCTCCTTTC +
Preference number: 2 (lower is better)
Translates to: FRPRSFNTVFATSLFSIYVSTTM*HSRSPF
Trigger: GAAAGGAGAACGAGAGTGCCACATTGTTGTGCTGAC...ATATATTGAGAATAGGGATGTTGCAAAAACAGTGTTAAAGGAACGGGGCCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR CCA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGCCAATAGTCATCAGGTaGGGGATAGCTCAGTTTAAC +
Preference number: 2 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLPIVIR*GIAQFN
Trigger: GTTAAACTGAGCTATCCCCCACCTGATGACTATTGG...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR CAA 90 bp ATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTaGCCGATTTCTCTGGCTAAAATATCAACAGCCTGGCTTGCTTAT +
Preference number: 2 (lower is better)
Translates to: MQTQDSKLQIRVNLG*PISLAKISTAWLAY
Trigger: ATAAGCAAGCCAGGCTGTTGATATTTTAGCCAGAGAAATCGGCAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGTACACAAAGACTCAATaGACAGCACCAGACCCAAAT +
Preference number: 2 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLYTKTQ*TAPDPN
Trigger: ATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTA...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGTTTGGACATTCTGAATaGGACCCTAGTTCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLFGHSE*DPSSFQ
Trigger: CTGGAAAGAACTAGGGTCTCATTCAGAATGTCCAAA...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR TCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTTTCTGTCCTCATCTTaGAAGCCTTTAAGCCATATC +
Preference number: 2 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDFLSSS*KPLSHI
Trigger: GATATGGCTTAAAGGCTTTCAAGATGAGGACAGAAA...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATAGAGGTCCTTCTACTTaGATTGTGAGTTTCATTCCA +
Preference number: 2 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDRGPST*IVSFIP
Trigger: TGGAATGAAACTCACAATGCAAGTAGAAGGACCTCT...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAAAGAGGTCCTTCTACTTaGATTGTGAGTTTCATTCCA +
Preference number: 2 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQRGPST*IVSFIP
Trigger: TGGAATGAAACTCACAATGCAAGTAGAAGGACCTCT...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCTTCCTTTCCTGCTTTTaGAGTTACACAAAGACTCAA +
Preference number: 2 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSFLSCF*SYTKTQ
Trigger: TTGAGTCTTTGTGTAACTGCAAAAGCAGGAAAGGAA...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTCTTGACTTCCTTTCCTaGTTTTGCAGTTACACAAAG +
Preference number: 2 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPLDFLS*FCSYTK
Trigger: CTTTGTGTAACTGCAAAAGCAGGAAAGGAAGTCAAG...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR GCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTTTCCTTTCCTGCTTTTaGAGTTACACAAAGACTCAA +
Preference number: 2 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPFLSCF*SYTKTQ
Trigger: TTGAGTCTTTGTGTAACTGCAAAAGCAGGAAAGGAA...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR TCA 72 bp AGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTaGGCTCTAGGTGGAGGGTGGTGGGAGGGGCATAGA +
Preference number: 3 (lower is better)
Translates to: RMACPWDWSRLG*ALGGGWWEGHR
Trigger: TCTATGCCCCTCCCACCACCCTCCACCTAGAGCTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR TCA 72 bp AAATCACGAGGGAGGGCTGGCTGCAGGCATCCCAGGTaGGATGGGCTCCAACAAGGAGTAGACCCACAGCTG +
Preference number: 3 (lower is better)
Translates to: KSRGRAGCRHPR*DGLQQGVDPQL
Trigger: CAGCTGTGGGTCTACTCCTTGTTGGAGCCCATCTCACCTGGGATGCCTGCAGCCAGCCCTCCCTCGTGATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
3UTR GCA 72 bp GGTGACCTCAACCCAGCCCTTGTTTCTGTGAGGTCCTaGTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGC +
Preference number: 3 (lower is better)
Translates to: GDLNPALVSVRS*FCRMACPWDWS
Trigger: GCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACCTCACAGAAACAAGGGCTGGGTTGAGGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGCCCAACTGGCCTGATTaGGAGAGGTCCTTCTACTTG +
Preference number: 3 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGEPNWPD*ERSFYL
Trigger: CAAGTAGAAGGACCTCTCCAAATCAGGCCAGTTGGG...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR GCA 72 bp CTCAACCCAGCCCTTGTTTCTGTGAGGTCCTGCTTTTaGAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTT +
Preference number: 3 (lower is better)
Translates to: LNPALVSVRSCF*RMACPWDWSRL
Trigger: AAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACCTCACAGAAACAAGGGCTGGGTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR CCA 72 bp CTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTaGCTGCAGGCATCCCAGGTGAGATGGGCTCCAACA +
Preference number: 3 (lower is better)
Translates to: LLLKVRQITREG*LQASQVRWAPT
Trigger: TGTTGGAGCCCATCTCACCTGGGATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
3UTR-3UTR CAA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGGAGAGGTCCTTCTACTaGCATTGTGAGTTTCATTCC +
Preference number: 3 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGEERSFY*HCEFHS
Trigger: GGAATGAAACTCACAATGCAAGTAGAAGGACCTCTC...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGTTCAGTTTGGTCCCTTaGCTACTAAGCAATTTGCCT +
Preference number: 3 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGEFSLVP*LLSNLP
Trigger: AGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAA...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR CCA 72 bp CAGTCCACAGAATCCTCATCCGTCAGCACAACAATGTaGCACTCTCGTTCTCCTTTCTTGGCACAGCCCACC +
Preference number: 3 (lower is better)
Translates to: QSTESSSVSTTM*HSRSPFLAQPT
Trigger: GGTGGGCTGTGCCAAGAAAGGAGAACGAGAGTGCCACATTGTTGTGCTGACGGATGAGGATTCTGTGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR CAA 90 bp GGGCTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGATCTCGTTCTCCTTTCTaGGCACAGCCCACCATGATG +
Preference number: 3 (lower is better)
Translates to: GLQQGVDPQLALILKVVRSRSPF*AQPTMM
Trigger: CATCATGGTGGGCTGTGCCAAGAAAGGAGAACGAGA...TCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR CAA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTTCCAGGCCATTGGCCTaGCAAATGGATGCCAATAGT +
Preference number: 3 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSSRPLA*QMDANS
Trigger: ACTATTGGCATCCATTTGCAAGGCCAATGGCCTGGA...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR TCA 72 bp AAAAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTaGGACAAATCACGAGGGAGGGCTGGCTGCAGGCAT +
Preference number: 3 (lower is better)
Translates to: KRLGEKHVSYSR*DKSRGRAGCRH
Trigger: ATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
3UTR-3UTR CAA 90 bp GGGCTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGAAATATTCCTCCCCCATaGGTGGAGGGTGGTCTTCAT +
Preference number: 3 (lower is better)
Translates to: GLQQGVDPQLALILKVVRNIPPP*VEGGLH
Trigger: ATGAAGACCACCCTCCACCAATGGGGGAGGAATATT...TCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR CAA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGTTGCTACTAAGCAATTaGCCTGGTATAAAACAAGAC +
Preference number: 3 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGELLLSN*PGIKQD
Trigger: GTCTTGTTTTATACCAGGCAAATTGCTTAGTAGCAA...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGCTTAAGAATTTCCTTTaGGACATTCTGAATGAGACC +
Preference number: 3 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGELKNFL*DILNET
Trigger: GGTCTCATTCAGAATGTCCAAAAGGAAATTCTTAAG...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGTGTGAGGTCCTGCTTTaGCAGAATGGCCTGCCCCTG +
Preference number: 3 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGCEVLL*QNGLPL
Trigger: CAGGGGCAGGCCATTCTGCAAAAGCAGGACCTCACA...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTAACACTGTCGTCTaGCCCTCCCTCCAACTCCTC +
Preference number: 3 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGLNTVV*PSLQLL
Trigger: GAGGAGTTGGAGGGAGGGCAAGACGACAGTGTTAAG...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR TCA 72 bp ACCAGGGCTGCTGCAAAGATGGTAGCTAATTACCAGTaGGTACTTCTTCATCCCCTGCCAGAGGCATGGACT +
Preference number: 3 (lower is better)
Translates to: TRAAAKMVANYQ*VLLHPLPEAWT
Trigger: AGTCCATGCCTCTGGCAGGGGATGAAGAAGTACTCACTGGTAATTAGCTACCATCTTTGCAGCAGCCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
3UTR-3UTR CAA 90 bp CTTGGAGCTATAAAGAATTTGGGAATATTCCTCCCCCATTGGTGGAGGGTGGTCTCTCGTTCTCCTTTCTaGGCACAGCCCACCATGATG +
Preference number: 3 (lower is better)
Translates to: LGAIKNLGIFLPHWWRVVSRSPF*AQPTMM
Trigger: CATCATGGTGGGCTGTGCCAAGAAAGGAGAACGAGA...GACCACCCTCCACCAATGGGGGAGGAATATTCCCAAATTCTTTATAGCTCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR CAA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCGGAGCTATAAAGAATTaGGGAATATTCCTCCCCCAT +
Preference number: 3 (lower is better)
Translates to: MSPTQGETNHEGGLAAGIGAIKN*GIFLPH
Trigger: ATGGGGGAGGAATATTCCCAAATTCTTTATAGCTCC...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR CAA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCCTGGATGAAGGGGCGTaGTACATAATTATAGATGAC +
Preference number: 3 (lower is better)
Translates to: MSPTQGETNHEGGLAAGILDEGA*YIIIDD
Trigger: GTCATCTATAATTATGTACAACGCCCCTTCATCCAG...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR CAA 90 bp CCACAGCTGGCCCTAATCCTGAAAGTCGTTAGAAGCCATCTGAGAAAGTGGGGCAGATTCGTGAGGGATTaGCTTCGAACACACTGGAAA +
Preference number: 3 (lower is better)
Translates to: PQLALILKVVRSHLRKWGRFVRD*LRTHWK
Trigger: TTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCT...GCCCCACTTTCTCAGATGGCTTCTAACGACTTTCAGGATTAGGGCCAGCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR CCA 72 bp ATCCTAACCCTTAATCCAGGCCATTGGCCTTGCAAATaGATGCCAATAGTCATCAGGTGGGGGATAGCTCAG +
Preference number: 3 (lower is better)
Translates to: ILTLNPGHWPCK*MPIVIRWGIAQ
Trigger: CTGAGCTATCCCCCACCTGATGACTATTGGCATCCATTTGCAAGGCCAATGGCCTGGATTAAGGGTTAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGAGGATAAGGACTGCTTaGCTAAGCACGAGGCAACAG +
Preference number: 3 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGRIRTA*LSTRQQ
Trigger: CTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCT...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp CAGATTCGTGAGGGATTTGCTTCGAACACACTGGAAATCCACATGGCGACTCTTAGGATAAGGACTGCTTaGCTAAGCACGAGGCAACAG +
Preference number: 3 (lower is better)
Translates to: QIREGFASNTLEIHMATLRIRTA*LSTRQQ
Trigger: CTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCT...AAGAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481911.5
3UTR TCA 72 bp CCTCCAAGACATCATCTCCAGCAGCTACCAGATTCGTaGGGGATTTGCTTCGAACACACTGGAAATCCACAT +
Preference number: 3 (lower is better)
Translates to: PPRHHLQQLPDS*GICFEHTGNPH
Trigger: ATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTGGTAGCTGCTGGAGATGATGTCTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR CCA 72 bp TATACTATTAATAGCCATGGAGAACAGGAGGGAAGATaGTTCAGCACTGTGTGGGCTGAGGAGGGTGATCTG +
Preference number: 3 (lower is better)
Translates to: YTINSHGEQEGR*FSTVWAEEGDL
Trigger: CAGATCACCCTCCTCAGCCCACACAGTGCTGAACCATCTTCCCTCCTGTTCTCCATGGCTATTAATAGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp CTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGAAGCCTGGATGAAGGGGCGTaGTACATAATTATAGATGAC +
Preference number: 3 (lower is better)
Translates to: LQQGVDPQLALILKVVRSLDEGA*YIIIDD
Trigger: GTCATCTATAATTATGTACAACGCCCCTTCATCCAG...GCTTCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR CAA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTCTTAAGAATTTCCTTTaGGACATTCTGAATGAGACC +
Preference number: 3 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSLKNFL*DILNET
Trigger: GGTCTCATTCAGAATGTCCAAAAGGAAATTCTTAAG...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGAGCTATAAAGAATTaGGGAATATTCCTCCCCCAT +
Preference number: 3 (lower is better)
Translates to: KVRGEACLLLKVRQITREGAIKN*GIFLPH
Trigger: ATGGGGGAGGAATATTCCCAAATTCTTTATAGCTCC...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR CAA 90 bp TTAGCCGGTCAAGTTCATCCACTTGGGGTGGGTGATGCATTAATATCTCCTGGTAGATTCGTGAGGGATTaGCTTCGAACACACTGGAAA +
Preference number: 3 (lower is better)
Translates to: LAGQVHPLGVGDALISPGRFVRD*LRTHWK
Trigger: TTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCT...ACCAGGAGATATTAATGCATCACCCACCCCAAGTGGATGAACTTGACCGGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
3UTR-3UTR CAA 90 bp CCACAGCTGGCCCTAATCCTGAAAGTCGTTAGAAGCCATCTGAGAAAGTGGGGCTTGCTACTAAGCAATTaGCCTGGTATAAAACAAGAC +
Preference number: 3 (lower is better)
Translates to: PQLALILKVVRSHLRKWGLLLSN*PGIKQD
Trigger: GTCTTGTTTTATACCAGGCAAATTGCTTAGTAGCAA...GCCCCACTTTCTCAGATGGCTTCTAACGACTTTCAGGATTAGGGCCAGCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481911.5
3UTR-3UTR CAA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGGAGAGGTCCTTCTACTaGCATTGTGAGTTTCATTCC +
Preference number: 3 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGERSFY*HCEFHS
Trigger: GGAATGAAACTCACAATGCAAGTAGAAGGACCTCTC...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATCTTAACACTGTCGTCTaGCCCTCCCTCCAACTCCTC +
Preference number: 3 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYLNTVV*PSLQLL
Trigger: GAGGAGTTGGAGGGAGGGCAAGACGACAGTGTTAAG...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATCCCAACTGGCCTGATTaGGAGAGGTCCTTCTACTTG +
Preference number: 3 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDPNWPD*ERSFYL
Trigger: CAAGTAGAAGGACCTCTCCAAATCAGGCCAGTTGGG...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATCCCAACTGGCCTGATTaGGAGAGGTCCTTCTACTTG +
Preference number: 3 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYPNWPD*ERSFYL
Trigger: CAAGTAGAAGGACCTCTCCAAATCAGGCCAGTTGGG...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGAGGATAAGGACTGCTTaGCTAAGCACGAGGCAACAG +
Preference number: 3 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRRIRTA*LSTRQQ
Trigger: CTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCT...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
3UTR TCA 72 bp CAAATATTTTTCCAGGGCTTAGGGGAAACCATTAAATaGTCTGACTTAACACTGTCGTCTTGCCCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: QIFFQGLGETIK*SDLTLSSCPPS
Trigger: GGAGGGAGGGCAAGACGACAGTGTTAAGTCAGATCATTTAATGGTTTCCCCTAAGCCCTGGAAAAATATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR CCA 72 bp CATTGGCCTTGCAAATGGATGCCAATAGTCATCAGGTaGGGGATAGCTCAGTTTAACCACTTACTACATTCT +
Preference number: 3 (lower is better)
Translates to: HWPCKWMPIVIR*GIAQFNHLLHS
Trigger: AGAATGTAGTAAGTGGTTAAACTGAGCTATCCCCCACCTGATGACTATTGGCATCCATTTGCAAGGCCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCAGGATAAGGACTGCTTaGCTAAGCACGAGGCAACAG +
Preference number: 3 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSRIRTA*LSTRQQ
Trigger: CTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCT...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATAGATTCGGGTTAATCTaGGCTTGCCGATTTCTCTGG +
Preference number: 3 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYRFGLI*ACRFLW
Trigger: CCAGAGAAATCGGCAAGCCAAGATTAACCCGAATCT...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR GCA 72 bp AACAAAACCCAAGAACAGAGTATAAAGGATAAGGACTaGTTTGCTAAGCACGAGGCAACAGGAGTCTTGACT +
Preference number: 3 (lower is better)
Translates to: NKTQEQSIKDKD*FAKHEATGVLT
Trigger: AGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTTTATACTCTGTTCTTGGGTTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
3UTR GCA 72 bp AACAGAGCATTAATTTCCACAGTGATGCTAGTCACATaGAGAGAACGTAAGAACACTTTTTCAGCCCTGGAA +
Preference number: 3 (lower is better)
Translates to: NRALISTVMLVT*RERKNTFSALE
Trigger: TTCCAGGGCTGAAAAAGTGTTCTTACGTTCTCTGCATGTGACTAGCATCACTGTGGAAATTAATGCTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR GCA 72 bp CAAAGTAAAGGGTTACACAGGACAGTGTCAAGTATATaGCATACTTCATACCTGGCATTTTCCCTAAGCAAG +
Preference number: 3 (lower is better)
Translates to: QSKGLHRTVSSI*HTSYLAFSLSK
Trigger: CTTGCTTAGGGAAAATGCCAGGTATGAAGTATGGCATATACTTGACACTGTCCTGTGTAACCCTTTACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR GCA 72 bp AAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTaGCGATTTCTCTGGCTAAAATATCAACAGCCTGGC +
Preference number: 3 (lower is better)
Translates to: KILNFRFGLILA*RFLWLKYQQPG
Trigger: GCCAGGCTGTTGATATTTTAGCCAGAGAAATCGGCAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATTTCAGTTTGGTCCCTTaGCTACTAAGCAATTTGCCT +
Preference number: 3 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYFSLVP*LLSNLP
Trigger: AGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAA...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGTTCAGTTTGGTCCCTTaGCTACTAAGCAATTTGCCT +
Preference number: 3 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRFSLVP*LLSNLP
Trigger: AGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAA...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
3UTR-3UTR CAA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACCTAATGAGCATCCGATaGGTGTCTGCTTTTAGAAGT +
Preference number: 3 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDLMSIR*VSAFRS
Trigger: ACTTCTAAAAGCAGACACCAATCGGATGCTCATTAG...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGCTAATGAGCATCCGATaGGTGTCTGCTTTTAGAAGT +
Preference number: 3 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLLMSIR*VSAFRS
Trigger: ACTTCTAAAAGCAGACACCAATCGGATGCTCATTAG...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGCTAATGAGCATCCGATaGGTGTCTGCTTTTAGAAGT +
Preference number: 3 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLLMSIR*VSAFRS
Trigger: ACTTCTAAAAGCAGACACCAATCGGATGCTCATTAG...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGCTTAAGAATTTCCTTTaGGACATTCTGAATGAGACC +
Preference number: 3 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRLKNFL*DILNET
Trigger: GGTCTCATTCAGAATGTCCAAAAGGAAATTCTTAAG...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCTTAGACTCCGAAACCTaGAAGCTAAAAAGGTCTCAT +
Preference number: 3 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSLDSET*KLKRSH
Trigger: ATGAGACCTTTTTAGCTTCAAGGTTTCGGAGTCTAA...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATATTTCTGTCCTCATCTaGAAAGCCTTTAAGCCATAT +
Preference number: 3 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYISVLI*KAFKPY
Trigger: ATATGGCTTAAAGGCTTTCAAGATGAGGACAGAAAT...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR-3UTR CAA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTTTAGACTCCGAAACCTaGAAGCTAAAAAGGTCTCAT +
Preference number: 3 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPLDSET*KLKRSH
Trigger: ATGAGACCTTTTTAGCTTCAAGGTTTCGGAGTCTAA...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR TCA 72 bp AGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATaGATCATCCATTTGTTTAGACTCCGAAACCTTGAA +
Preference number: 3 (lower is better)
Translates to: RSFYLHCEFHSK*IIHLFRLRNLE
Trigger: TTCAAGGTTTCGGAGTCTAAACAAATGGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR CCA 72 bp GGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTaGATGATTATGACTAGGACAGTCATTAAATGGAAT +
Preference number: 3 (lower is better)
Translates to: GKSFQHLPGFYL*MIMTRTVIKWN
Trigger: ATTCCATTTAATGACTGTCCTAGTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGTGGAGCAGGCTTGGGTaGGCTCTAGGTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGEWSRLG*ALGGGW
Trigger: CCACCCTCCACCTAGAGCTCACCCAAGCCTGCTCCA...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACAATGTGGCACTCTCGTTGTCCCGCTCGGGGCTaGAATCCGCCCGGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: SSQSTESSSVSTTMWHSRCPARG*NPPGRR
Trigger: GCGCCTCCCGGGCGGATTCCAGCCCCGAGCGGGACA...ACGAGAGTGCCACATTGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp GAGGGATTTGCTTCGAACACACTGGAAATCCACATGGCGACTCTTCCCTTCTTCTGTCCCGCTCGGGGCTaGAATCCGCCCGGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: EGFASNTLEIHMATLPFFCPARG*NPPGRR
Trigger: GCGCCTCCCGGGCGGATTCCAGCCCCGAGCGGGACA...GAAGAAGGGAAGAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCTGTCCCGCTCGGGGCTaGAATCCGCCCGGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSCPARG*NPPGRR
Trigger: GCGCCTCCCGGGCGGATTCCAGCCCCGAGCGGGACA...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGGTCTCCTACTCAAGGTaGGACAAATCACGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGEVSYSR*DKSRGR
Trigger: CCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGAC...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp CAGGCATCCCAGGTGAGATGGGCTCCAACAAGGAGTAGACCCACAGCTGGCCCTAAGCAGCTGGCCTCCTaGCGCAATAACCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: QASQVRWAPTRSRPTAGPKQLAS*RNNLSL
Trigger: CAGTGACAGGTTATTGCGGCAGGAGGCCAGCTGCTT...AGGGCCAGCTGTGGGTCTACTCCTTGTTGGAGCCCATCTCACCTGGGATGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGGCATCCCAGGTGAGATaGGCTCCAACAAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGEASQVR*APTRSR
Trigger: TCTACTCCTTGTTGGAGCCCATCTCACCTGGGATGC...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp GGTGGAGGGTGGTCTTCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACAATCACGAGGGAGGGCTaGCTGCAGGCATCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GGGWSSSQSTESSSVSTTITREG*LQASQV
Trigger: CACCTGGGATGCCTGCAGCCAGCCCTCCCTCGTGAT...TGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGAAGACCACCCTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTAGAATGGCCTGCCCCTaGGACTGGAGCAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSRMACP*DWSRLG
Trigger: CCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCT...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TCGTTCTCCTTTCTTGGCACAGCCCACCATGATGGGCAAGATGAGCTCTTCGAGATCACGAGGGAGGGCTaGCTGCAGGCATCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SFSFLGTAHHDGQDELFEITREG*LQASQV
Trigger: CACCTGGGATGCCTGCAGCCAGCCCTCCCTCGTGAT...CTCGAAGAGCTCATCTTGCCCATCATGGTGGGCTGTGCCAAGAAAGGAGAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTGGACTGGAGCAGGCTTaGGTGAGCTCTAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSGLEQA*VSSRWR
Trigger: CCTCCACCTAGAGCTCACCCAAGCCTGCTCCAGTCC...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGTGCCTCTTACCCATCTaGCCAGGAACCAACTCTGAA +
Preference number: 4 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGECLLPI*PGTNSE
Trigger: TTCAGAGTTGGTTCCTGGCCAGATGGGTAAGAGGCA...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCTGCAGGCATCCCAGGTaGGATGGGCTCCAACAAGGA +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGICRHPR*DGLQQG
Trigger: TCCTTGTTGGAGCCCATCTCACCTGGGATGCCTGCA...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTCAGGGACTGTGCAGATaGTGCTTCCCACCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSQGLCR*CFPPSF
Trigger: GAAGCTGGGTGGGAAGCATCATCTGCACAGTCCCTG...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTAGCGCGGCCACGCGGCTaGGTCACCCAGCGCTTCACG +
Preference number: 4 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLARPRG*VTQRFT
Trigger: CGTGAAGCGCTGGGTGACTCAGCCGCGTGGCCGCGC...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536244.5
CDS-3UTR GCA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGTACAGAGAAAAGTCCTaGACTAGGACAGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGEYREKS*TRTGTV
Trigger: CACAGTCCCTGTCCTAGTGCAGGACTTTTCTCTGTA...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTATGTCCCGCTCGGGGCTaGAATCCGCCCGGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLCPARG*NPPGRR
Trigger: GCGCCTCCCGGGCGGATTCCAGCCCCGAGCGGGACA...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGTTGCTTCGAACACACTaGAAATCCACATGGCGACTC +
Preference number: 4 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGELLRTH*KSTWRL
Trigger: GAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAA...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGCCATGTACCCCATGCTaGCACTCTTATGAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGEPCTPC*HSYESF
Trigger: GAAAGACTCATAAGAGTGCCAGCATGGGGTACATGG...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TCCTTTCTTGGCACAGCCCACCATGATGGGCAAGATGAGCTCTTCGAGGTAGTGTGCAGGCATCCCAGGTaGGATGGGCTCCAACAAGGA +
Preference number: 4 (lower is better)
Translates to: SFLGTAHHDGQDELFEVVCRHPR*DGLQQG
Trigger: TCCTTGTTGGAGCCCATCTCACCTGGGATGCCTGCA...CACTACCTCGAAGAGCTCATCTTGCCCATCATGGTGGGCTGTGCCAAGAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR GCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCGGGACTACAGGCACTTaGCACCACACCGGGCTAATT +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGIGTTGT*HHTGLI
Trigger: AATTAGCCCGGTGTGGTGGCAAGTGCCTGTAGTCCC...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR GCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATTCCTCCAGTCCACTCTaGACCCAACCTCAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDSSSPL*TQPQRA
Trigger: CGCCCGCTGAGGTTGGGTGCAGAGTGGACTGGAGGA...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536244.5
CDS-3UTR CCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCCATCCACTAAGCAGCTaGCCTCCTGCCGCAATAACC +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGIHPLSS*PPAAIT
Trigger: GGTTATTGCGGCAGGAGGCCAGCTGCTTAGTGGATG...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTCATCCACTAAGCAGCTaGCCTCCTGCCGCAATAACC +
Preference number: 4 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSHPLSS*PPAAIT
Trigger: GGTTATTGCGGCAGGAGGCCAGCTGCTTAGTGGATG...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TCCCCCATTGGTGGAGGGTGGTCTTCATCCCAGTCCACAGAATCCTCATCCGTCTCTCATTGGGCCGAGTaGAGTTGTACTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SPIGGGWSSSQSTESSSVSHWAE*SCTLFL
Trigger: CAGGAAGAGAGTACAACTTCACTCGGCCCAATGAGA...GACGGATGAGGATTCTGTGGACTGGGATGAAGACCACCCTCCACCAATGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp CATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACAATGTGGCACTCTCGTTTGCAGGCATCCCAGGTaGGATGGGCTCCAACAAGGA +
Preference number: 4 (lower is better)
Translates to: HPSPQNPHPSAQQCGTLVCRHPR*DGLQQG
Trigger: TCCTTGTTGGAGCCCATCTCACCTGGGATGCCTGCA...AACGAGAGTGCCACATTGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGGGGGAAACCATTAAATaGTCTGACTTAACACTGTCG +
Preference number: 4 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGEGETIK*SDLTLS
Trigger: CGACAGTGTTAAGTCAGATCATTTAATGGTTTCCCC...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGGGGTACTGCATATTGTaGAGTAAATCTGGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGEGYCIL*SKSGLL
Trigger: AAGCAAGCCAGATTTACTGCACAATATGCAGTACCC...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGTGTCCCGCTCGGGGCTaGAATCCGCCCGGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRCPARG*NPPGRR
Trigger: GCGCCTCCCGGGCGGATTCCAGCCCCGAGCGGGACA...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CCA 90 bp TCGTTCTCCTTTCTTGGCACAGCCCACCATGATGGGCAAGATGAGCTCTTCGAGCCCATTGGTGGAGGGTaGTCTTCATCCCAGTCCACA +
Preference number: 4 (lower is better)
Translates to: SFSFLGTAHHDGQDELFEPIGGG*SSSQST
Trigger: TGTGGACTGGGATGAAGACCACCCTCCACCAATGGG...CTCGAAGAGCTCATCTTGCCCATCATGGTGGGCTGTGCCAAGAAAGGAGAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCGGACTGGAGCAGGCTTaGGTGAGCTCTAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSGLEQA*VSSRWR
Trigger: CCTCCACCTAGAGCTCACCCAAGCCTGCTCCAGTCC...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCGTGAGCCACCACGCCTaGCCAAAAACCCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGIVSHHA*PKTLAF
Trigger: AAAAGCAAGGGTTTTTGGCCAGGCGTGGTGGCTCAC...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGGCCGCACCGTAAATaGGTGTCGCCTTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITREGPHRK*VSPFLQ
Trigger: CTGGAGGAAAGGCGACACCCATTTACGGTGCGGCCC...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536244.5
CDS-3UTR TCA 90 bp CAGGCATCCCAGGTGAGATGGGCTCCAACAAGGAGTAGACCCACAGCTGGCCCTTTCATCCTTAGATTCTaGGTCCTGAACTGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: QASQVRWAPTRSRPTAGPFILRF*VLNCPF
Trigger: AAACGGACAGTTCAGGACTCAGAATCTAAGGATGAA...AGGGCCAGCTGTGGGTCTACTCCTTGTTGGAGCCCATCTCACCTGGGATGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCCAGCTACCAGATTCGTaGGGGATTTGCTTCGAACAC +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGIQLPDS*GICFEH
Trigger: GTGTTCGAAGCAAATCCCTCACGAATCTGGTAGCTG...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp GGTGGAGGGTGGTCTTCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACACAGCTACCAGATTCGTaGGGGATTTGCTTCGAACAC +
Preference number: 4 (lower is better)
Translates to: GGGWSSSQSTESSSVSTTQLPDS*GICFEH
Trigger: GTGTTCGAAGCAAATCCCTCACGAATCTGGTAGCTG...TGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGAAGACCACCCTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCTCCACTTGGGGTGGGTaGTGCATTAATATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGISTWGG*CINISW
Trigger: CCAGGAGATATTAATGCATCACCCACCCCAAGTGGA...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGTGCAGGCATCCCAGGTaGGATGGGCTCCAACAAGGA +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITRECRHPR*DGLQQG
Trigger: TCCTTGTTGGAGCCCATCTCACCTGGGATGCCTGCA...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR GCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTACCTGTCACTGTCACTaGCACGGTGAACATTCATCC +
Preference number: 4 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSTCHCH*HGEHSS
Trigger: GGATGAATGTTCACCGTGGCAGTGACAGTGACAGGT...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATGTGAGGTCCTGCTTTTaGAGAATGGCCTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDVRSCF*RMACPW
Trigger: CCAGGGGCAGGCCATTCTGCAAAAGCAGGACCTCAC...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AACAATGTGGCACTCTCGTTCTCCTTTCTTGGCACAGCCCACCATGATGGGCAACATCCACTAAGCAGCTaGCCTCCTGCCGCAATAACC +
Preference number: 4 (lower is better)
Translates to: NNVALSFSFLGTAHHDGQHPLSS*PPAAIT
Trigger: GGTTATTGCGGCAGGAGGCCAGCTGCTTAGTGGATG...TTGCCCATCATGGTGGGCTGTGCCAAGAAAGGAGAACGAGAGTGCCACATTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTATCACGAGGGAGGGCTaGCTGCAGGCATCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFITREG*LQASQV
Trigger: CACCTGGGATGCCTGCAGCCAGCCCTCCCTCGTGAT...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTCCAACTGGCCTGATTTaGAGAGGTCCTTCTACTTGC +
Preference number: 4 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSPTGLI*RGPSTC
Trigger: GCAAGTAGAAGGACCTCTCCAAATCAGGCCAGTTGG...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTAGAATGGCCTGCCCCTaGGACTGGAGCAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFRMACP*DWSRLG
Trigger: CCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCT...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATCCTGCTTTTGCAGAATaGCCTGCCCCTGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDPAFAE*PAPGTG
Trigger: TCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGG...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCAGTCCCCTCCGCGCGTaGCACGCCGGGAAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSSPLRA*HAGKAV
Trigger: CACGGCCTTCCCGGCGTGCCACGCGCGGAGGGGACT...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536244.5
CDS-3UTR TCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTCCTGAACTGTCCGTTTaGTCAGAGAGAAATCTCGTC +
Preference number: 4 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSPELSV*SERNLV
Trigger: GACGAGATTTCTCTCTGATCAAACGGACAGTTCAGG...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCCTGTCACTGCCACGGTaGACATTCATCCTTAGATTC +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGILSLPR*TFILRF
Trigger: GAATCTAAGGATGAATGTTCACCGTGGCAGTGACAG...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCATTATGAGGACCAGATaGAGCCAGGCTGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGIIMRTR*SQAVCF
Trigger: GAAGCAAACAGCCTGGCTTCATCTGGTCCTCATAAT...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp GGTGGTCTTCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACAATGTGGCTCTCATTGGGCCGAGTaGAGTTGTACTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GGLHPSPQNPHPSAQQCGSHWAE*SCTLFL
Trigger: CAGGAAGAGAGTACAACTTCACTCGGCCCAATGAGA...GCCACATTGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGAAGACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp CCACAGCTGGCCCTAATCCTGAAAGTCGTTAGAAGCCATCTGAGAAAGTGGGGCTCCACTTGGGGTGGGTaGTGCATTAATATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PQLALILKVVRSHLRKWGSTWGG*CINISW
Trigger: CCAGGAGATATTAATGCATCACCCACCCCAAGTGGA...GCCCCACTTTCTCAGATGGCTTCTAACGACTTTCAGGATTAGGGCCAGCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp CATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACAATGTGGCACTCTCGTTGTCTCCTACTCAAGGTaGGACAAATCACGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: HPSPQNPHPSAQQCGTLVVSYSR*DKSRGR
Trigger: CCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGAC...AACGAGAGTGCCACATTGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCATCAGAAGGAACCTGTaGTCCCAGCTTTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGIIRRNL*SQLFLQ
Trigger: CTGAAGGAAAAGCTGGGATCACAGGTTCCTTCTGAT...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp GGGCTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGAACCTGTCACTGTCACTaGCACGGTGAACATTCATCC +
Preference number: 4 (lower is better)
Translates to: GLQQGVDPQLALILKVVRTCHCH*HGEHSS
Trigger: GGATGAATGTTCACCGTGGCAGTGACAGTGACAGGT...TCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR GCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCACTCCATGTACCCCATaGTGGCACTCTTATGAGTCT +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGITPCTP*WHSYES
Trigger: AGACTCATAAGAGTGCCAGCATGGGGTACATGGAGT...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATCATCCACTAAGCAGCTaGCCTCCTGCCGCAATAACC +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDHPLSS*PPAAIT
Trigger: GGTTATTGCGGCAGGAGGCCAGCTGCTTAGTGGATG...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp GAGGGATTTGCTTCGAACACACTGGAAATCCACATGGCGACTCTTCCCTTCTTCCCCATTGGTGGAGGGTaGTCTTCATCCCAGTCCACA +
Preference number: 4 (lower is better)
Translates to: EGFASNTLEIHMATLPFFPIGGG*SSSQST
Trigger: TGTGGACTGGGATGAAGACCACCCTCCACCAATGGG...GAAGAAGGGAAGAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGCCCATTGGTGGAGGGTaGTCTTCATCCCAGTCCACA +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITREPIGGG*SSSQST
Trigger: TGTGGACTGGGATGAAGACCACCCTCCACCAATGGG...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CCA 90 bp GGTGGTCTTCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACAATGTGGCATATTCCTCCCCCATTaGTGGAGGGTGGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: GGLHPSPQNPHPSAQQCGIFLPH*WRVVFI
Trigger: GATGAAGACCACCCTCCACCAATGGGGGAGGAATAT...GCCACATTGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGAAGACCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGAGAATCTGTAGAGCTTaGAGCTATAAAGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGERICRA*SYKEFG
Trigger: CCCAAATTCTTTATAGCTCCAAGCTCTACAGATTCT...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp CTCCTGGTCCTCCAAGACATCATCTCCAGCAGCTACCAGATTCGTGAGGGATTTGCATCCCAGGTGAGATaGGCTCCAACAAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: LLVLQDIISSSYQIREGFASQVR*APTRSR
Trigger: TCTACTCCTTGTTGGAGCCCATCTCACCTGGGATGC...AAATCCCTCACGAATCTGGTAGCTGCTGGAGATGATGTCTTGGAGGACCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCCCATGTACCCCATGCTaGCACTCTTATGAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGIPCTPC*HSYESF
Trigger: GAAAGACTCATAAGAGTGCCAGCATGGGGTACATGG...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGCTCTAGGTGGAGGGTaGTGGGAGGGGCATAGAAAT +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITREALGGG*WEGHRN
Trigger: ATTTCTATGCCCCTCCCACCACCCTCCACCTAGAGC...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp GGGCTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGACCTGAACTGTCCGTTTaGTCAGAGAGAAATCTCGTC +
Preference number: 4 (lower is better)
Translates to: GLQQGVDPQLALILKVVRPELSV*SERNLV
Trigger: GACGAGATTTCTCTCTGATCAAACGGACAGTTCAGG...TCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp GGGCTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGACTGTCACTGCCACGGTaGACATTCATCCTTAGATTC +
Preference number: 4 (lower is better)
Translates to: GLQQGVDPQLALILKVVRLSLPR*TFILRF
Trigger: GAATCTAAGGATGAATGTTCACCGTGGCAGTGACAG...TCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp GGGCTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGAGTACATAATTATAGATaGCTTCAGACCGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: GLQQGVDPQLALILKVVRVHNYR*LQTGRQ
Trigger: CTGGCGGCCGGTCTGAAGTCATCTATAATTATGTAC...TCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp GTTCTTTCCAGATGCAATTTGGGTGCAGAGGCCACCAAGAATGGCATCTTCATTTGCAGGCATCCCAGGTaGGATGGGCTCCAACAAGGA +
Preference number: 4 (lower is better)
Translates to: VLSRCNLGAEATKNGIFICRHPR*DGLQQG
Trigger: TCCTTGTTGGAGCCCATCTCACCTGGGATGCCTGCA...AATGAAGATGCCATTCTTGGTGGCCTCTGCACCCAAATTGCATCTGGAAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCGTAGCTAATTACCAGTaGGTACTTCTTCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGIVANYQ*VLLHPL
Trigger: CAGGGGATGAAGAAGTACTCACTGGTAATTAGCTAC...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR GCA 90 bp CTTGGAGCTATAAAGAATTTGGGAATATTCCTCCCCCATTGGTGGAGGGTGGTCAAGCAGCTGGCCTCCTaGCGCAATAACCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: LGAIKNLGIFLPHWWRVVKQLAS*RNNLSL
Trigger: CAGTGACAGGTTATTGCGGCAGGAGGCCAGCTGCTT...GACCACCCTCCACCAATGGGGGAGGAATATTCCCAAATTCTTTATAGCTCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR GCA 90 bp GGGCTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGATACTTCTTCATCCCCTaGCAGAGGCATGGACTTACT +
Preference number: 4 (lower is better)
Translates to: GLQQGVDPQLALILKVVRYFFIP*QRHGLT
Trigger: AGTAAGTCCATGCCTCTGGCAGGGGATGAAGAAGTA...TCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR GCA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTGTGAGGTCCTGCTTTTaGAGAATGGCCTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFVRSCF*RMACPW
Trigger: CCAGGGGCAGGCCATTCTGCAAAAGCAGGACCTCAC...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTAGCCGGTCAAGTTCATCCACTTGGGGTGGGTGATGCATTAATATCTCCTGGTTTCCTCCCCCATTGGTaGAGGGTGGTCTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: LAGQVHPLGVGDALISPGFLPHW*RVVFIP
Trigger: TGGGATGAAGACCACCCTCCACCAATGGGGGAGGAA...ACCAGGAGATATTAATGCATCACCCACCCCAAGTGGATGAACTTGACCGGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATGCATCCCAGGTGAGATaGGCTCCAACAAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDASQVR*APTRSR
Trigger: TCTACTCCTTGTTGGAGCCCATCTCACCTGGGATGC...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTCCAATAGTCATCAGGTaGGGGATAGCTCAGTTTAAC +
Preference number: 4 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSPIVIR*GIAQFN
Trigger: GTTAAACTGAGCTATCCCCCACCTGATGACTATTGG...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTCCTCCAACTCCTCAGTaGCAAATGTTTCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSPPTPQ*QMFPHQ
Trigger: TTGATGAGGAAACATTTGCCACTGAGGAGTTGGAGG...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCCCTCCAACTCCTCAGTaGCAAATGTTTCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGIPPTPQ*QMFPHQ
Trigger: TTGATGAGGAAACATTTGCCACTGAGGAGTTGGAGG...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGTGAGCCACCACGCCTaGCCAAAAACCCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITREVSHHA*PKTLAF
Trigger: AAAAGCAAGGGTTTTTGGCCAGGCGTGGTGGCTCAC...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp CTGGTCCTCCAAGACATCATCTCCAGCAGCTACCAGATTCGTGAGGGATTTGCTCTGTCACTGCCACGGTaGACATTCATCCTTAGATTC +
Preference number: 4 (lower is better)
Translates to: LVLQDIISSSYQIREGFALSLPR*TFILRF
Trigger: GAATCTAAGGATGAATGTTCACCGTGGCAGTGACAG...AGCAAATCCCTCACGAATCTGGTAGCTGCTGGAGATGATGTCTTGGAGGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp TTCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACAATGTGGCACTCTCGATTATGAGGACCAGATaGAGCCAGGCTGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: FIPVHRILIRQHNNVALSIMRTR*SQAVCF
Trigger: GAAGCAAACAGCCTGGCTTCATCTGGTCCTCATAAT...CGAGAGTGCCACATTGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp CTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGAAGCCCCATGACATCTGGATaGAGGGGCGTTGTACATAAT +
Preference number: 4 (lower is better)
Translates to: LQQGVDPQLALILKVVRSPMTSG*RGVVHN
Trigger: ATTATGTACAACGCCCCTTCATCCAGATGTCATGGG...GCTTCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGTCCACTTGGGGTGGGTaGTGCATTAATATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITRESTWGG*CINISW
Trigger: CCAGGAGATATTAATGCATCACCCACCCCAAGTGGA...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATTCCACTTGGGGTGGGTaGTGCATTAATATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDSTWGG*CINISW
Trigger: CCAGGAGATATTAATGCATCACCCACCCCAAGTGGA...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp AACAATGTGGCACTCTCGTTCTCCTTTCTTGGCACAGCCCACCATGATGGGCAATCGTTAGAAGCCATCTaGGAAAGTGGGGCATTTAGC +
Preference number: 4 (lower is better)
Translates to: NNVALSFSFLGTAHHDGQSLEAI*ESGAFS
Trigger: GCTAAATGCCCCACTTTCTCAGATGGCTTCTAACGA...TTGCCCATCATGGTGGGCTGTGCCAAGAAAGGAGAACGAGAGTGCCACATTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp GGGCATTTAGCCGGTCAAGTTCATCCACTTGGGGTGGGTGATGCATTAATATCTGTCTCCTACTCAAGGTaGGACAAATCACGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GHLAGQVHPLGVGDALISVSYSR*DKSRGR
Trigger: CCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGAC...AGATATTAATGCATCACCCACCCCAAGTGGATGAACTTGACCGGCTAAATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATAGAGGCATAGTCAAGTaGGAGGTCTTCATTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDRGIVK*EVFIPG
Trigger: CCCAGGAATGAAGACCTCTCACTTGACTATGCCTCT...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR TCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCTTTGGACATTCTGAATaGGACCCTAGTTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGIFGHSE*DPSSFQ
Trigger: CTGGAAAGAACTAGGGTCTCATTCAGAATGTCCAAA...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTAAGCAGCTGGCCTCCTaGCGCAATAACCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFKQLAS*RNNLSL
Trigger: CAGTGACAGGTTATTGCGGCAGGAGGCCAGCTGCTT...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR GCA 90 bp CTGGTCCTCCAAGACATCATCTCCAGCAGCTACCAGATTCGTGAGGGATTTGCTTACTTCTTCATCCCCTaGCAGAGGCATGGACTTACT +
Preference number: 4 (lower is better)
Translates to: LVLQDIISSSYQIREGFAYFFIP*QRHGLT
Trigger: AGTAAGTCCATGCCTCTGGCAGGGGATGAAGAAGTA...AGCAAATCCCTCACGAATCTGGTAGCTGCTGGAGATGATGTCTTGGAGGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR GCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCATATCCACAGCAATGTaGTGCTCCAGAGTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGIISTAM*CSRVLR
Trigger: TCTTAACACTCTGGAGCAGCACATTGCTGTGGATAT...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGCCAGGCCATTGGCCTTaGAAATGGATGCCAATAGTC +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITREPGHWP*KWMPIV
Trigger: GACTATTGGCATCCATTTGCAAGGCCAATGGCCTGG...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTATTTTGCAGAATGGCCTaGCCCTGGGACTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLFCRMA*PWDWSR
Trigger: CCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAA...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGTTTCTGTGAGGTCCTaGTTTTGCAGAATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITREVSVRS*FCRMAC
Trigger: GCAGGCCATTCTGCAAAAGCAGGACCTCACAGAAAC...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATTTAACACTGTCGTCTTaGCCTCCCTCCAACTCCTCA +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDLTLSS*PPSNSS
Trigger: TGAGGAGTTGGAGGGAGGGCAAGACGACAGTGTTAA...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCGTTGTACTCTCTTCCTaGTCCAAACATCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGIVVLSS*SKHPSF
Trigger: GAATGAAGGATGTTTGGACCAGGAAGAGAGTACAAC...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265344.8
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CCA 90 bp CTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGAAGCGTCAGCACAACAATGTaGCACTCTCGTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LQQGVDPQLALILKVVRSVSTTM*HSRSPF
Trigger: GAAAGGAGAACGAGAGTGCCACATTGTTGTGCTGAC...GCTTCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp AACAATGTGGCACTCTCGTTCTCCTTTCTTGGCACAGCCCACCATGATGGGCAAGTCAGCACAACAATGTaGCACTCTCGTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: NNVALSFSFLGTAHHDGQVSTTM*HSRSPF
Trigger: GAAAGGAGAACGAGAGTGCCACATTGTTGTGCTGAC...TTGCCCATCATGGTGGGCTGTGCCAAGAAAGGAGAACGAGAGTGCCACATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTCCCATTGGTGGAGGGTaGTCTTCATCCCAGTCCACA +
Preference number: 4 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFPIGGG*SSSQST
Trigger: TGTGGACTGGGATGAAGACCACCCTCCACCAATGGG...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATATATTCCTCCCCCATTaGTGGAGGGTGGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDIFLPH*WRVVFI
Trigger: GATGAAGACCACCCTCCACCAATGGGGGAGGAATAT...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TCGTTCTCCTTTCTTGGCACAGCCCACCATGATGGGCAAGATGAGCTCTTCGAGTTTTCCCATGACATCTaGATGAAGGGGCGTTGTACA +
Preference number: 4 (lower is better)
Translates to: SFSFLGTAHHDGQDELFEFSHDI*MKGRCT
Trigger: TGTACAACGCCCCTTCATCCAGATGTCATGGGAAAA...CTCGAAGAGCTCATCTTGCCCATCATGGTGGGCTGTGCCAAGAAAGGAGAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACATCACGAGGGAGGGCTaGCTGCAGGCATCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDITREG*LQASQV
Trigger: CACCTGGGATGCCTGCAGCCAGCCCTCCCTCGTGAT...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATCTAGGTGGAGGGTGGTaGGAGGGGCATAGAAATAAA +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDLGGGW*EGHRNK
Trigger: TTTATTTCTATGCCCCTCCCACCACCCTCCACCTAG...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGTGCCTCTTACCCATCTaGCCAGGAACCAACTCTGAA +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITRECLLPI*PGTNSE
Trigger: TTCAGAGTTGGTTCCTGGCCAGATGGGTAAGAGGCA...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR CAA 72 bp ACATCATCTCCAGCAGCTACCAGATTCGTGAGGGATTaGCTTCGAACACACTGGAAATCCACATGGCGACTC +
Preference number: 4 (lower is better)
Translates to: TSSPAATRFVRD*LRTHWKSTWRL
Trigger: GAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTGGTAGCTGCTGGAGATGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCCCTGAACTGTCCGTTTaGTCAGAGAGAAATCTCGTC +
Preference number: 4 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSPELSV*SERNLV
Trigger: GACGAGATTTCTCTCTGATCAAACGGACAGTTCAGG...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp GGTGGTCTTCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACAATGTGGCTTAGATTCTGAGTCCTaGACTGTCCGTTTGATCAGA +
Preference number: 4 (lower is better)
Translates to: GGLHPSPQNPHPSAQQCGLDSES*TVRLIR
Trigger: TCTGATCAAACGGACAGTTCAGGACTCAGAATCTAA...GCCACATTGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGAAGACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGCTGTCACTGCCACGGTaGACATTCATCCTTAGATTC +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITRELSLPR*TFILRF
Trigger: GAATCTAAGGATGAATGTTCACCGTGGCAGTGACAG...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp GGGCTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGAGAAATACAGTTGCACTaGTGCCTTCAGCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: GLQQGVDPQLALILKVVREIQLH*CLQQSH
Trigger: ATGAGATTGCTGAAGGCATCAGTGCAACTGTATTTC...TCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGTACATAATTATAGATaGCTTCAGACCGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITREVHNYR*LQTGRQ
Trigger: CTGGCGGCCGGTCTGAAGTCATCTATAATTATGTAC...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp GAGGGATTTGCTTCGAACACACTGGAAATCCACATGGCGACTCTTCCCTTCTTCGTACATAATTATAGATaGCTTCAGACCGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: EGFASNTLEIHMATLPFFVHNYR*LQTGRQ
Trigger: CTGGCGGCCGGTCTGAAGTCATCTATAATTATGTAC...GAAGAAGGGAAGAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGCCCATGACATCTGGATaGAGGGGCGTTGTACATAAT +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITREPMTSG*RGVVHN
Trigger: ATTATGTACAACGCCCCTTCATCCAGATGTCATGGG...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp TCCAGCAGCTACCAGATTCGTGAGGGATTTGCTTCGAACACACTGGAAATCCACTCGTTAGAAGCCATCTaGGAAAGTGGGGCATTTAGC +
Preference number: 4 (lower is better)
Translates to: SSSYQIREGFASNTLEIHSLEAI*ESGAFS
Trigger: GCTAAATGCCCCACTTTCTCAGATGGCTTCTAACGA...GTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTGGTAGCTGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTGTCTCCTACTCAAGGTaGGACAAATCACGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFVSYSR*DKSRGR
Trigger: CCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGAC...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp GGGCTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGATACACAAAGACTCAATaGACAGCACCAGACCCAAAT +
Preference number: 4 (lower is better)
Translates to: GLQQGVDPQLALILKVVRYTKTQ*TAPDPN
Trigger: ATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTA...TCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481911.5
CDS-3UTR TCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGATAACCCAACTGGCCTaGTTTGGAGAGGTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITREITQLA*FGEVLL
Trigger: TAGAAGGACCTCTCCAAATCAGGCCAGTTGGGTTAT...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCTTTCTGTCCTCATCTTaGAAGCCTTTAAGCCATATC +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGIFLSSS*KPLSHI
Trigger: GATATGGCTTAAAGGCTTTCAAGATGAGGACAGAAA...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCATGGAAGTCTACTaGGAAGCAGAAAAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITREGMEVY*EAEKKH
Trigger: GTGCTTCTTTTCTGCTTCTCAGTAGACTTCCATGCC...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGTGGAGCAGGCTTGGGTaGGCTCTAGGTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLWSRLG*ALGGGW
Trigger: CCACCCTCCACCTAGAGCTCACCCAAGCCTGCTCCA...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCAGCCCTTGTTTCTGTaGGGTCCTGCTTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGQPLFL*GPAFAE
Trigger: TTCTGCAAAAGCAGGACCTCACAGAAACAAGGGCTG...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCCCACATCCCACTTTTTaGCAGTTTACATTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGIPHPTF*QFTLKP
Trigger: AGGCTTTAATGTAAACTGTCAAAAAGTGGGATGTGG...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp CAGATTCGTGAGGGATTTGCTTCGAACACACTGGAAATCCACATGGCGACTCTTACCTGTCACTGTCACTaGCACGGTGAACATTCATCC +
Preference number: 4 (lower is better)
Translates to: QIREGFASNTLEIHMATLTCHCH*HGEHSS
Trigger: GGATGAATGTTCACCGTGGCAGTGACAGTGACAGGT...AAGAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR GCA 90 bp GGGCTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGATGTGCGAAATACAGTTaGACTGATGCCTTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: GLQQGVDPQLALILKVVRCAKYS*TDAFSN
Trigger: ATTGCTGAAGGCATCAGTGCAACTGTATTTCGCACA...TCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR GCA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCTACTTCTTCATCCCCTaGCAGAGGCATGGACTTACT +
Preference number: 4 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSYFFIP*QRHGLT
Trigger: AGTAAGTCCATGCCTCTGGCAGGGGATGAAGAAGTA...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATGGGAATGGGAATTACTaGCAAAGCCCACACTACTGT +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDGNGNY*QSPHYC
Trigger: ACAGTAGTGTGGGCTTTGGCAGTAATTCCCATTCCC...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR GCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCCTTGACTTCCTTTCCTaGTTTTGCAGTTACACAAAG +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGILDFLS*FCSYTK
Trigger: CTTTGTGTAACTGCAAAAGCAGGAAAGGAAGTCAAG...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR GCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGTTAACACTGTCGTCTTaGCCTCCCTCCAACTCCTCA +
Preference number: 4 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGLTLSS*PPSNSS
Trigger: TGAGGAGTTGGAGGGAGGGCAAGACGACAGTGTTAA...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCCTGGCCAAAAACCCTTaGTTTTTAACTTCGATTGAC +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGILAKNP*FLTSID
Trigger: GTCAATCGAAGTTAAAAAGCAAGGGTTTTTGGCCAG...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATGTCAGCACAACAATGTaGCACTCTCGTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDVSTTM*HSRSPF
Trigger: GAAAGGAGAACGAGAGTGCCACATTGTTGTGCTGAC...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTATTCCTCCCCCATTGGTaGAGGGTGGTCTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLFLPHW*RVVFIP
Trigger: TGGGATGAAGACCACCCTCCACCAATGGGGGAGGAA...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp GGGCATTTAGCCGGTCAAGTTCATCCACTTGGGGTGGGTGATGCATTAATATCTATATTCCTCCCCCATTaGTGGAGGGTGGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: GHLAGQVHPLGVGDALISIFLPH*WRVVFI
Trigger: GATGAAGACCACCCTCCACCAATGGGGGAGGAATAT...AGATATTAATGCATCACCCACCCCAAGTGGATGAACTTGACCGGCTAAATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp AACAATGTGGCACTCTCGTTCTCCTTTCTTGGCACAGCCCACCATGATGGGCAATTTTCCCATGACATCTaGATGAAGGGGCGTTGTACA +
Preference number: 4 (lower is better)
Translates to: NNVALSFSFLGTAHHDGQFSHDI*MKGRCT
Trigger: TGTACAACGCCCCTTCATCCAGATGTCATGGGAAAA...TTGCCCATCATGGTGGGCTGTGCCAAGAAAGGAGAACGAGAGTGCCACATTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp GCTACCAGATTCGTGAGGGATTTGCTTCGAACACACTGGAAATCCACATGGCGATTGCTTCGAACACACTaGAAATCCACATGGCGACTC +
Preference number: 4 (lower is better)
Translates to: ATRFVRDLLRTHWKSTWRLLRTH*KSTWRL
Trigger: GAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAA...TCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTGGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCTTGCTTCGAACACACTaGAAATCCACATGGCGACTC +
Preference number: 4 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSLLRTH*KSTWRL
Trigger: GAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAA...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGTTGCTTCGAACACACTaGAAATCCACATGGCGACTC +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITRELLRTH*KSTWRL
Trigger: GAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAA...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CCA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCTGCATTAATATCTCCTaGTCCTCCAAGACATCATCT +
Preference number: 4 (lower is better)
Translates to: MSPTQGETNHEGGLAAGICINIS*SSKTSS
Trigger: AGATGATGTCTTGGAGGACCAGGAGATATTAATGCA...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCCAACTGGCCTGATTTaGAGAGGTCCTTCTACTTGC +
Preference number: 4 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGPTGLI*RGPSTC
Trigger: GCAAGTAGAAGGACCTCTCCAAATCAGGCCAGTTGG...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACAATGTGGCACTCTCGTTAGATTCTGAGTCCTaGACTGTCCGTTTGATCAGA +
Preference number: 4 (lower is better)
Translates to: FIPVHRILIRQHNNVALSLDSES*TVRLIR
Trigger: TCTGATCAAACGGACAGTTCAGGACTCAGAATCTAA...CGAGAGTGCCACATTGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCCCATGACATCTGGATaGAGGGGCGTTGTACATAAT +
Preference number: 4 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGPMTSG*RGVVHN
Trigger: ATTATGTACAACGCCCCTTCATCCAGATGTCATGGG...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp GAGGGATTTGCTTCGAACACACTGGAAATCCACATGGCGACTCTTCCCTTCTTCGTAGCTAATTACCAGTaGGTACTTCTTCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: EGFASNTLEIHMATLPFFVANYQ*VLLHPL
Trigger: CAGGGGATGAAGAAGTACTCACTGGTAATTAGCTAC...GAAGAAGGGAAGAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCCTCTCCTACACAGGATaGGCATCCCAAATCCAAAAA +
Preference number: 4 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSLSYTG*ASQIQK
Trigger: TTTTTGGATTTGGGATGCTCATCCTGTGTAGGAGAG...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTTGGAGCAGGCTTGGGTaGGCTCTAGGTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPWSRLG*ALGGGW
Trigger: CCACCCTCCACCTAGAGCTCACCCAAGCCTGCTCCA...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTTTTGCAGAATGGCCTaGCCCTGGGACTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDFCRMA*PWDWSR
Trigger: CCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAA...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTAGTAGTACTGGGTACTaGATATTGTGCAGTAAATCT +
Preference number: 4 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSSSTGY*ILCSKS
Trigger: AGATTTACTGCACAATATGCAGTACCCAGTACTACT...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGGTCATCATGGCTCACTaGAGCCTCATCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LHKDSMNSTRPKFFKLPGVIMAH*SLILLG
Trigger: GCCCAGGAGGATGAGGCTGCAGTGAGCCATGATGAC...CCCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR CCA 90 bp TCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACAATGTGGCACTCTCGTGTTGTACTCTCTTCCTaGTCCAAACATCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: SSQSTESSSVSTTMWHSRVVLSS*SKHPSF
Trigger: GAATGAAGGATGTTTGGACCAGGAAGAGAGTACAAC...ACGAGAGTGCCACATTGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATTTTTCCCATGACATCTaGATGAAGGGGCGTTGTACA +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDFSHDI*MKGRCT
Trigger: TGTACAACGCCCCTTCATCCAGATGTCATGGGAAAA...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTAGCATCCCAGGTGAGATaGGCTCCAACAAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLASQVR*APTRSR
Trigger: TCTACTCCTTGTTGGAGCCCATCTCACCTGGGATGC...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp GTTCTTTCCAGATGCAATTTGGGTGCAGAGGCCACCAAGAATGGCATCTTCATTTCTGGTGCTTGGGAATaGGAATTACTGCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: VLSRCNLGAEATKNGIFISGAWE*ELLPKP
Trigger: GGGCTTTGGCAGTAATTCCCATTCCCAAGCACCAGA...AATGAAGATGCCATTCTTGGTGGCCTCTGCACCCAAATTGCATCTGGAAAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR CCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATCATTGGCCTTGCAAATaGATGCCAATAGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDHWPCK*MPIVIR
Trigger: CCTGATGACTATTGGCATCCATTTGCAAGGCCAATG...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATTCAAACCCCACAGGTTaGGGTCAAATGCATGTTAAC +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDSNPTG*GQMHVN
Trigger: GTTAACATGCATTTGACCCCAACCTGTGGGGTTTGA...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCGGACTGGAGCAGGCTTaGGTGAGCTCTAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSGLEQA*VSSRWR
Trigger: CCTCCACCTAGAGCTCACCCAAGCCTGCTCCAGTCC...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATCCTGCTTTTGCAGAATaGCCTGCCCCTGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDPAFAE*PAPGTG
Trigger: TCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGG...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGCCTCCAACTCCTCAGTaGCAAATGTTTCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITREPPTPQ*QMFPHQ
Trigger: TTGATGAGGAAACATTTGCCACTGAGGAGTTGGAGG...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATTTAGATTCTGAGTCCTaGACTGTCCGTTTGATCAGA +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDLDSES*TVRLIR
Trigger: TCTGATCAAACGGACAGTTCAGGACTCAGAATCTAA...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTATTATGAGGACCAGATaGAGCCAGGCTGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFIMRTR*SQAVCF
Trigger: GAAGCAAACAGCCTGGCTTCATCTGGTCCTCATAAT...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp TCCAGCAGCTACCAGATTCGTGAGGGATTTGCTTCGAACACACTGGAAATCCACAAAGCACTCAGATCTTaGCATCGGATAGTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SSSYQIREGFASNTLEIHKALRS*HRIVLK
Trigger: CTTCAACACTATCCGATGTCAAGATCTGAGTGCTTT...GTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTGGTAGCTGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265344.8
CDS-3UTR TCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGAAAGCACTCAGATCTTaGCATCGGATAGTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITREKALRS*HRIVLK
Trigger: CTTCAACACTATCCGATGTCAAGATCTGAGTGCTTT...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000536244.5
CDS-3UTR TCA 90 bp GTTCTTTCCAGATGCAATTTGGGTGCAGAGGCCACCAAGAATGGCATCTTCATTGTACATAATTATAGATaGCTTCAGACCGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: VLSRCNLGAEATKNGIFIVHNYR*LQTGRQ
Trigger: CTGGCGGCCGGTCTGAAGTCATCTATAATTATGTAC...AATGAAGATGCCATTCTTGGTGGCCTCTGCACCCAAATTGCATCTGGAAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTCCCATGACATCTGGATaGAGGGGCGTTGTACATAAT +
Preference number: 4 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFPMTSG*RGVVHN
Trigger: ATTATGTACAACGCCCCTTCATCCAGATGTCATGGG...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCTTTGGACATTCTGAATaGGACCCTAGTTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSFGHSE*DPSSFQ
Trigger: CTGGAAAGAACTAGGGTCTCATTCAGAATGTCCAAA...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATTTCCTACCCAATGTGTaGGCAGCTATTAGGCTATTT +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDFLPNV*AAIRLF
Trigger: AAATAGCCTAATAGCTGCTCACACATTGGGTAGGAA...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp GTTCTTTCCAGATGCAATTTGGGTGCAGAGGCCACCAAGAATGGCATCTTCATTGGCATGGAAGTCTACTaGGAAGCAGAAAAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: VLSRCNLGAEATKNGIFIGMEVY*EAEKKH
Trigger: GTGCTTCTTTTCTGCTTCTCAGTAGACTTCCATGCC...AATGAAGATGCCATTCTTGGTGGCCTCTGCACCCAAATTGCATCTGGAAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCGGGGAAACCATTAAATaGTCTGACTTAACACTGTCG +
Preference number: 4 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSGETIK*SDLTLS
Trigger: CGACAGTGTTAAGTCAGATCATTTAATGGTTTCCCC...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGCCTGTCTCAGCCTCTTaGGTGGCTGGGACCACAGGT +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLPVSAS*VAGTTG
Trigger: ACCTGTGGTCCCAGCCACTCAAGAGGCTGAGACAGG...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR TCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATCTTGACTTAAAATATTaGGACAGGGTCTTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDLDLKY*DRVLPC
Trigger: ACAGGGCAAGACCCTGTCTCAATATTTTAAGTCAAG...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR TCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGGGCAAGAAGTGGCACTaGATACATTACTACAAACCC +
Preference number: 4 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGGKKWH*IHYYKP
Trigger: GGGTTTGTAGTAATGTATTCAGTGCCACTTCTTGCC...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR TCA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCTGGCTCCATCTCCCATaGAAGCATCATATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSWLHLP*KHHICF
Trigger: AAAGCAAATATGATGCTTTCATGGGAGATGGAGCCA...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR GCA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATAAGCAGCTGGCCTCCTaGCGCAATAACCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYKQLAS*RNNLSL
Trigger: CAGTGACAGGTTATTGCGGCAGGAGGCCAGCTGCTT...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp GGGCTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGATTCCTTTCCTGCTTTTaGAGTTACACAAAGACTCAA +
Preference number: 4 (lower is better)
Translates to: GLQQGVDPQLALILKVVRFLSCF*SYTKTQ
Trigger: TTGAGTCTTTGTGTAACTGCAAAAGCAGGAAAGGAA...TCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481911.5
CDS-3UTR GCA 90 bp GTTCTTTCCAGATGCAATTTGGGTGCAGAGGCCACCAAGAATGGCATCTTCATTTACAGAGAAAAGTCCTaGACTAGGACAGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: VLSRCNLGAEATKNGIFIYREKS*TRTGTV
Trigger: CACAGTCCCTGTCCTAGTGCAGGACTTTTCTCTGTA...AATGAAGATGCCATTCTTGGTGGCCTCTGCACCCAAATTGCATCTGGAAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGTGATGCTAGTCACATaGAGAGAACGTAAGAACACT +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITREVMLVT*RERKNT
Trigger: AGTGTTCTTACGTTCTCTGCATGTGACTAGCATCAC...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCGGGTACTGCATATTGTaGAGTAAATCTGGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSGYCIL*SKSGLL
Trigger: AAGCAAGCCAGATTTACTGCACAATATGCAGTACCC...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp GGTGGAGGGTGGTCTTCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACATTTGCTTCTTTTTCTTaGGCTACAGCTAAAGTATCA +
Preference number: 4 (lower is better)
Translates to: GGGWSSSQSTESSSVSTTFASFS*ATAKVS
Trigger: TGATACTTTAGCTGTAGCCCAAGAAAAAGAAGCAAA...TGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGAAGACCACCCTCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp GCTACCAGATTCGTGAGGGATTTGCTTCGAACACACTGGAAATCCACATGGCGAAGTATCTCTAAGATCTaGGATAGAGATGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: ATRFVRDLLRTHWKSTWRSISKI*DRDAIR
Trigger: CCTGATGGCATCTCTATCCCAGATCTTAGAGATACT...TCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTGGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265344.8
CDS-3UTR CCA 90 bp TTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGTTCCTCCCCCATTGGTaGAGGGTGGTCTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: LHKDSMNSTRPKFFKLPGFLPHW*RVVFIP
Trigger: TGGGATGAAGACCACCCTCCACCAATGGGGGAGGAA...CCCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CCA 90 bp GGGCTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGAAGAATCTGTAGAGCTTaGAGCTATAAAGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: GLQQGVDPQLALILKVVRRICRA*SYKEFG
Trigger: CCCAAATTCTTTATAGCTCCAAGCTCTACAGATTCT...TCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp CTCCTGGTCCTCCAAGACATCATCTCCAGCAGCTACCAGATTCGTGAGGGATTTTGCATTAATATCTCCTaGTCCTCCAAGACATCATCT +
Preference number: 4 (lower is better)
Translates to: LLVLQDIISSSYQIREGFCINIS*SSKTSS
Trigger: AGATGATGTCTTGGAGGACCAGGAGATATTAATGCA...AAATCCCTCACGAATCTGGTAGCTGCTGGAGATGATGTCTTGGAGGACCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp GTTCTTTCCAGATGCAATTTGGGTGCAGAGGCCACCAAGAATGGCATCTTCATTCCATGTACCCCATGCTaGCACTCTTATGAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: VLSRCNLGAEATKNGIFIPCTPC*HSYESF
Trigger: GAAAGACTCATAAGAGTGCCAGCATGGGGTACATGG...AATGAAGATGCCATTCTTGGTGGCCTCTGCACCCAAATTGCATCTGGAAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCCAATAGTCATCAGGTaGGGGATAGCTCAGTTTAAC +
Preference number: 4 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGPIVIR*GIAQFN
Trigger: GTTAAACTGAGCTATCCCCCACCTGATGACTATTGG...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACGCTCTAGGTGGAGGGTaGTGGGAGGGGCATAGAAAT +
Preference number: 4 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDALGGG*WEGHRN
Trigger: ATTTCTATGCCCCTCCCACCACCCTCCACCTAGAGC...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATGCTCTAGGTGGAGGGTaGTGGGAGGGGCATAGAAAT +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDALGGG*WEGHRN
Trigger: ATTTCTATGCCCCTCCCACCACCCTCCACCTAGAGC...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCCCTGCTTTTGCAGAATaGCCTGCCCCTGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSPAFAE*PAPGTG
Trigger: TCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGG...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGTTAGATTCTGAGTCCTaGACTGTCCGTTTGATCAGA +
Preference number: 4 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGLDSES*TVRLIR
Trigger: TCTGATCAAACGGACAGTTCAGGACTCAGAATCTAA...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTAGCCGGTCAAGTTCATCCACTTGGGGTGGGTGATGCATTAATATCTCCTGGTTTCATCCTTAGATTCTaGGTCCTGAACTGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: LAGQVHPLGVGDALISPGFILRF*VLNCPF
Trigger: AAACGGACAGTTCAGGACTCAGAATCTAAGGATGAA...ACCAGGAGATATTAATGCATCACCCACCCCAAGTGGATGAACTTGACCGGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTAATTATGAGGACCAGATaGAGCCAGGCTGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLIMRTR*SQAVCF
Trigger: GAAGCAAACAGCCTGGCTTCATCTGGTCCTCATAAT...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATGTCTCCTACTCAAGGTaGGACAAATCACGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYVSYSR*DKSRGR
Trigger: CCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGAC...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTCAGGGACTGTGCAGATaGTGCTTCCCACCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPQGLCR*CFPPSF
Trigger: GAAGCTGGGTGGGAAGCATCATCTGCACAGTCCCTG...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTAATCAGAAGGAACCTGTaGTCCCAGCTTTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLIRRNL*SQLFLQ
Trigger: CTGAAGGAAAAGCTGGGATCACAGGTTCCTTCTGAT...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATCCACATCCCACTTTTTaGCAGTTTACATTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDPHPTF*QFTLKP
Trigger: AGGCTTTAATGTAAACTGTCAAAAAGTGGGATGTGG...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTGACTTAAAATATTaGGACAGGGTCTTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGLDLKY*DRVLPC
Trigger: ACAGGGCAAGACCCTGTCTCAATATTTTAAGTCAAG...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR TCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGGCGGGCGCACTTTTCTaGGTTGCGCATACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLAGALF*VAHTLS
Trigger: TGAGAGGGTATGCGCAACTCAGAAAAGTGCGCCCGC...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536244.5
CDS-3UTR GCA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCAAGCAGCTGGCCTCCTaGCGCAATAACCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSKQLAS*RNNLSL
Trigger: CAGTGACAGGTTATTGCGGCAGGAGGCCAGCTGCTT...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp GGGCATTTAGCCGGTCAAGTTCATCCACTTGGGGTGGGTGATGCATTAATATCTTGTGCGAAATACAGTTaGACTGATGCCTTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: GHLAGQVHPLGVGDALISCAKYS*TDAFSN
Trigger: ATTGCTGAAGGCATCAGTGCAACTGTATTTCGCACA...AGATATTAATGCATCACCCACCCCAAGTGGATGAACTTGACCGGCTAAATGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR GCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGAGAGGTCCTTCTACTTaGATTGTGAGTTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITRERGPST*IVSFIP
Trigger: TGGAATGAAACTCACAATGCAAGTAGAAGGACCTCT...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTATACAGAGAAAAGTCCTaGACTAGGACAGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLYREKS*TRTGTV
Trigger: CACAGTCCCTGTCCTAGTGCAGGACTTTTCTCTGTA...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATCTTTCAGATTTGGGGTaGTCAACTGTTAAGTATTCC +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDLSDLG*STVKYS
Trigger: GGAATACTTAACAGTTGAGCACCCCAAATCTGAAAG...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGGTGATGCTAGTCACATaGAGAGAACGTAAGAACACT +
Preference number: 4 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGVMLVT*RERKNT
Trigger: AGTGTTCTTACGTTCTCTGCATGTGACTAGCATCAC...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGACAGTGTCAAGTATATaGCATACTTCATACCTGGCA +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITRETVSSI*HTSYLA
Trigger: TGCCAGGTATGAAGTATGGCATATACTTGACACTGT...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGGTGAGGTCCTGCTTTTaGAGAATGGCCTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLVRSCF*RMACPW
Trigger: CCAGGGGCAGGCCATTCTGCAAAAGCAGGACCTCAC...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGATCAACAGCCTGGCTTaGTTATTTAGGCACTTAGAA +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITREINSLA*LFRHLE
Trigger: TTCTAAGTGCCTAAATAAGCAAGCCAGGCTGTTGAT...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGCTGGCCAAAAACCCTTaGTTTTTAACTTCGATTGAC +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITRELAKNP*FLTSID
Trigger: GTCAATCGAAGTTAAAAAGCAAGGGTTTTTGGCCAG...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAAGGGACTACAGGCACTTaGCACCACACCGGGCTAATT +
Preference number: 4 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQGTTGT*HHTGLI
Trigger: AATTAGCCCGGTGTGGTGGCAAGTGCCTGTAGTCCC...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR GCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTGTCATCATGGCTCACTaGAGCCTCATCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPVIMAH*SLILLG
Trigger: GCCCAGGAGGATGAGGCTGCAGTGAGCCATGATGAC...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR CCA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAACATCCACTAAGCAGCTaGCCTCCTGCCGCAATAACC +
Preference number: 4 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQHPLSS*PPAAIT
Trigger: GGTTATTGCGGCAGGAGGCCAGCTGCTTAGTGGATG...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CCA 90 bp CCACAGCTGGCCCTAATCCTGAAAGTCGTTAGAAGCCATCTGAGAAAGTGGGGCTTTGCTTCTTTTTCTTaGGCTACAGCTAAAGTATCA +
Preference number: 4 (lower is better)
Translates to: PQLALILKVVRSHLRKWGFASFS*ATAKVS
Trigger: TGATACTTTAGCTGTAGCCCAAGAAAAAGAAGCAAA...GCCCCACTTTCTCAGATGGCTTCTAACGACTTTCAGGATTAGGGCCAGCTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp TCCAGCAGCTACCAGATTCGTGAGGGATTTGCTTCGAACACACTGGAAATCCACTGCATTAATATCTCCTaGTCCTCCAAGACATCATCT +
Preference number: 4 (lower is better)
Translates to: SSSYQIREGFASNTLEIHCINIS*SSKTSS
Trigger: AGATGATGTCTTGGAGGACCAGGAGATATTAATGCA...GTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTGGTAGCTGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCCGTTTATTCCCACTTTaGAAGCAAGAACCTTTGATG +
Preference number: 4 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSRLFPL*KQEPLM
Trigger: CATCAAAGGTTCTTGCTTCCAAAGTGGGAATAAACG...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR TCA 90 bp TTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGTCTCATTGGGCCGAGTaGAGTTGTACTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LHKDSMNSTRPKFFKLPGSHWAE*SCTLFL
Trigger: CAGGAAGAGAGTACAACTTCACTCGGCCCAATGAGA...CCCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTGAAATACAGTTGCACTaGTGCCTTCAGCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFEIQLH*CLQQSH
Trigger: ATGAGATTGCTGAAGGCATCAGTGCAACTGTATTTC...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACCAGCTACCAGATTCGTaGGGGATTTGCTTCGAACAC +
Preference number: 4 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDQLPDS*GICFEH
Trigger: GTGTTCGAAGCAAATCCCTCACGAATCTGGTAGCTG...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATTCCACTTGGGGTGGGTaGTGCATTAATATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYSTWGG*CINISW
Trigger: CCAGGAGATATTAATGCATCACCCACCCCAAGTGGA...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp GTTCTTTCCAGATGCAATTTGGGTGCAGAGGCCACCAAGAATGGCATCTTCATTCCCTTCCTTTGGGGATaGCATTGGTATAATATTCCT +
Preference number: 4 (lower is better)
Translates to: VLSRCNLGAEATKNGIFIPFLWG*HWYNIP
Trigger: AGGAATATTATACCAATGTCATCCCCAAAGGAAGGG...AATGAAGATGCCATTCTTGGTGGCCTCTGCACCCAAATTGCATCTGGAAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGCAGCCCTTGTTTCTGTaGGGTCCTGCTTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LHKDSMNSTRPKFFKLPGQPLFL*GPAFAE
Trigger: TTCTGCAAAAGCAGGACCTCACAGAAACAAGGGCTG...CCCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATACCTGTCACTGTCACTaGCACGGTGAACATTCATCC +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDTCHCH*HGEHSS
Trigger: GGATGAATGTTCACCGTGGCAGTGACAGTGACAGGT...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGTTCCTTTCCTGCTTTTaGAGTTACACAAAGACTCAA +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITREFLSCF*SYTKTQ
Trigger: TTGAGTCTTTGTGTAACTGCAAAAGCAGGAAAGGAA...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR GCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTGACTTCCTTTCCTaGTTTTGCAGTTACACAAAG +
Preference number: 4 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGLDFLS*FCSYTK
Trigger: CTTTGTGTAACTGCAAAAGCAGGAAAGGAAGTCAAG...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTTCAGATTTGGGGTaGTCAACTGTTAAGTATTCC +
Preference number: 4 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGLSDLG*STVKYS
Trigger: GGAATACTTAACAGTTGAGCACCCCAAATCTGAAAG...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGCCAGGCCATTGGCCTTaGAAATGGATGCCAATAGTC +
Preference number: 4 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRPGHWP*KWMPIV
Trigger: GACTATTGGCATCCATTTGCAAGGCCAATGGCCTGG...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGTTTCTGTGAGGTCCTaGTTTTGCAGAATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRVSVRS*FCRMAC
Trigger: GCAGGCCATTCTGCAAAAGCAGGACCTCACAGAAAC...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGATCAACAGCCTGGCTTaGTTATTTAGGCACTTAGAA +
Preference number: 4 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGINSLA*LFRHLE
Trigger: TTCTAAGTGCCTAAATAAGCAAGCCAGGCTGTTGAT...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCGCAGTAAATCTGGCTTaGTTTCTTAACCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSAVNLA*FLNLFA
Trigger: AGCAAAAAGGTTAAGAAAGCAAGCCAGATTTACTGC...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TCCAGCAGCTACCAGATTCGTGAGGGATTTGCTTCGAACACACTGGAAATCCACTCATTAGACAGTTCATaGAGTAAAGCACTCAGATCT +
Preference number: 4 (lower is better)
Translates to: SSSYQIREGFASNTLEIHSLDSS*SKALRS
Trigger: AGATCTGAGTGCTTTACTCCATGAACTGTCTAATGA...GTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTGGTAGCTGCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265344.8
CDS-3UTR CCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGCCCATTGGTGGAGGGTaGTCTTCATCCCAGTCCACA +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLPIGGG*SSSQST
Trigger: TGTGGACTGGGATGAAGACCACCCTCCACCAATGGG...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTTAGGCCCCGTTCCTTTAACACTGTTTTTGCAACATCCCTATTCTCAATATATTTCCTCCCCCATTGGTaGAGGGTGGTCTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: FRPRSFNTVFATSLFSIYFLPHW*RVVFIP
Trigger: TGGGATGAAGACCACCCTCCACCAATGGGGGAGGAA...ATATATTGAGAATAGGGATGTTGCAAAAACAGTGTTAAAGGAACGGGGCCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTTTCCTCCCCCATTGGTaGAGGGTGGTCTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPFLPHW*RVVFIP
Trigger: TGGGATGAAGACCACCCTCCACCAATGGGGGAGGAA...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATATATTCCTCCCCCATTaGTGGAGGGTGGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYIFLPH*WRVVFI
Trigger: GATGAAGACCACCCTCCACCAATGGGGGAGGAATAT...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TCCAGCAGCTACCAGATTCGTGAGGGATTTGCTTCGAACACACTGGAAATCCACAGAATCTGTAGAGCTTaGAGCTATAAAGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: SSSYQIREGFASNTLEIHRICRA*SYKEFG
Trigger: CCCAAATTCTTTATAGCTCCAAGCTCTACAGATTCT...GTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTGGTAGCTGCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGAGCAGTGAAAATCTGTaGATTCACAACAAAACGTGT +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITRESSENL*IHNKTC
Trigger: ACACGTTTTGTTGTGAATCCACAGATTTTCACTGCT...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR CCA 90 bp GTTCTTTCCAGATGCAATTTGGGTGCAGAGGCCACCAAGAATGGCATCTTCATTAGGACAGTCATTAAATaGAATCGAGTAGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VLSRCNLGAEATKNGIFIRTVIK*NRVASP
Trigger: AGGAGAGGCTACTCGATTCCATTTAATGACTGTCCT...AATGAAGATGCCATTCTTGGTGGCCTCTGCACCCAAATTGCATCTGGAAAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTACATTGGCCTTGCAAATaGATGCCAATAGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLHWPCK*MPIVIR
Trigger: CCTGATGACTATTGGCATCCATTTGCAAGGCCAATG...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTATCAAACCCCACAGGTTaGGGTCAAATGCATGTTAAC +
Preference number: 4 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLSNPTG*GQMHVN
Trigger: GTTAACATGCATTTGACCCCAACCTGTGGGGTTTGA...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACCTAGGTGGAGGGTGGTaGGAGGGGCATAGAAATAAA +
Preference number: 4 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDLGGGW*EGHRNK
Trigger: TTTATTTCTATGCCCCTCCCACCACCCTCCACCTAG...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATCTAGGTGGAGGGTGGTaGGAGGGGCATAGAAATAAA +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDLGGGW*EGHRNK
Trigger: TTTATTTCTATGCCCCTCCCACCACCCTCCACCTAG...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTGCTTGCCGATTTCTCTaGCTAAAATATCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFACRFL*LKYQQP
Trigger: AGGCTGTTGATATTTTAGCCAGAGAAATCGGCAAGC...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATTCATTAGACAGTTCATaGAGTAAAGCACCTTCATTC +
Preference number: 4 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDSLDSS*SKAPSF
Trigger: GAATGAAGGTGCTTTACTCCATGAACTGTCTAATGA...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449081.6
CDS-3UTR CCA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTTCATTAGACAGTTCATaGAGTAAAGCACCAGCACTG +
Preference number: 4 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFSLDSS*SKAPAL
Trigger: CAGTGCTGGTGCTTTACTCCATGAACTGTCTAATGA...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481911.5
CDS-3UTR TCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATCCTGAACTGTCCGTTTaGTCAGAGAGAAATCTCGTC +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDPELSV*SERNLV
Trigger: GACGAGATTTCTCTCTGATCAAACGGACAGTTCAGG...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACGTACATAATTATAGATaGCTTCAGACCGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDVHNYR*LQTGRQ
Trigger: CTGGCGGCCGGTCTGAAGTCATCTATAATTATGTAC...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGCAGCTACCAGATTCGTaGGGGATTTGCTTCGAACAC +
Preference number: 4 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLQLPDS*GICFEH
Trigger: GTGTTCGAAGCAAATCCCTCACGAATCTGGTAGCTG...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATTCGTTAGAAGCCATCTaGGAAAGTGGGGCATTTAGC +
Preference number: 4 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYSLEAI*ESGAFS
Trigger: GCTAAATGCCCCACTTTCTCAGATGGCTTCTAACGA...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTCGTTAGAAGCCATCTaGGAAAGTGGGGCATTTAGC +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDSLEAI*ESGAFS
Trigger: GCTAAATGCCCCACTTTCTCAGATGGCTTCTAACGA...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATATAACCCAACTGGCCTaGTTTGGAGAGGTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDITQLA*FGEVLL
Trigger: TAGAAGGACCTCTCCAAATCAGGCCAGTTGGGTTAT...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTTTTCTGTCCTCATCTTaGAAGCCTTTAAGCCATATC +
Preference number: 4 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFFLSSS*KPLSHI
Trigger: GATATGGCTTAAAGGCTTTCAAGATGAGGACAGAAA...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTATTCCTACCCAATGTGTaGGCAGCTATTAGGCTATTT +
Preference number: 4 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLFLPNV*AAIRLF
Trigger: AAATAGCCTAATAGCTGCTCACACATTGGGTAGGAA...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTACCCTTCCTTTGGGGATaGCATTGGTATAATATTCCT +
Preference number: 4 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLPFLWG*HWYNIP
Trigger: AGGAATATTATACCAATGTCATCCCCAAAGGAAGGG...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTCCACATCCCACTTTTTaGCAGTTTACATTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFPHPTF*QFTLKP
Trigger: AGGCTTTAATGTAAACTGTCAAAAAGTGGGATGTGG...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAAACCTGTCACTGTCACTaGCACGGTGAACATTCATCC +
Preference number: 4 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQTCHCH*HGEHSS
Trigger: GGATGAATGTTCACCGTGGCAGTGACAGTGACAGGT...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR GCA 90 bp TTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGTACTTCTTCATCCCCTaGCAGAGGCATGGACTTACT +
Preference number: 4 (lower is better)
Translates to: LHKDSMNSTRPKFFKLPGYFFIP*QRHGLT
Trigger: AGTAAGTCCATGCCTCTGGCAGGGGATGAAGAAGTA...CCCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR GCA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTCTTGACTTCCTTTCCTaGTTTTGCAGTTACACAAAG +
Preference number: 4 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFLDFLS*FCSYTK
Trigger: CTTTGTGTAACTGCAAAAGCAGGAAAGGAAGTCAAG...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR GCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGCTAGTTCTTTCCAGATaGAATTTGGGTGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRLVLSR*NLGAEA
Trigger: GGCCTCTGCACCCAAATTGCATCTGGAAAGAACTAG...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTCCACAGCAATGTGCTaGTCCAGAGTGTTAAGACCT +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDSTAMC*SRVLRP
Trigger: AGGTCTTAACACTCTGGAGCAGCACATTGCTGTGGA...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTAATATCCACAGCAATGTaGTGCTCCAGAGTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLISTAM*CSRVLR
Trigger: TCTTAACACTCTGGAGCAGCACATTGCTGTGGATAT...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGACTCCATGTACCCCATaGTGGCACTCTTATGAGTCT +
Preference number: 4 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRTPCTP*WHSYES
Trigger: AGACTCATAAGAGTGCCAGCATGGGGTACATGGAGT...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp GTTCTTTCCAGATGCAATTTGGGTGCAGAGGCCACCAAGAATGGCATCTTCATTACAGTGTCAAGTATATaGCATACTTCATACCTGGCA +
Preference number: 4 (lower is better)
Translates to: VLSRCNLGAEATKNGIFITVSSI*HTSYLA
Trigger: TGCCAGGTATGAAGTATGGCATATACTTGACACTGT...AATGAAGATGCCATTCTTGGTGGCCTCTGCACCCAAATTGCATCTGGAAAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGGCAGTAAATCTGGCTTaGTTTCTTAACCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGAVNLA*FLNLFA
Trigger: AGCAAAAAGGTTAAGAAAGCAAGCCAGATTTACTGC...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTACGCACTTTTCTGAGTTaGGCATACCCTCTCAATTAT +
Preference number: 4 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLRTFLS*AYPLNY
Trigger: ATAATTGAGAGGGTATGCGCAACTCAGAAAAGTGCG...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536244.5
CDS-3UTR CCA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGTTTGCTTCTTTTTCTTaGGCTACAGCTAAAGTATCA +
Preference number: 4 (lower is better)
Translates to: KVRGEACLLLKVRQITREFASFS*ATAKVS
Trigger: TGATACTTTAGCTGTAGCCCAAGAAAAAGAAGCAAA...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGTCATTAGACAGTTCATaGAGTAAAGCACTCAGATCT +
Preference number: 4 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGSLDSS*SKALRS
Trigger: AGATCTGAGTGCTTTACTCCATGAACTGTCTAATGA...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR CCA 90 bp TTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGTTGCTTCGAACACACTaGAAATCCACATGGCGACTC +
Preference number: 4 (lower is better)
Translates to: LHKDSMNSTRPKFFKLPGLLRTH*KSTWRL
Trigger: GAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAA...CCCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCCTGTCACTGCCACGGTaGACATTCATCCTTAGATTC +
Preference number: 4 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSLSLPR*TFILRF
Trigger: GAATCTAAGGATGAATGTTCACCGTGGCAGTGACAG...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGTCTCATTGGGCCGAGTaGAGTTGTACTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLSHWAE*SCTLFL
Trigger: CAGGAAGAGAGTACAACTTCACTCGGCCCAATGAGA...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR TCA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAATCGTTAGAAGCCATCTaGGAAAGTGGGGCATTTAGC +
Preference number: 4 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQSLEAI*ESGAFS
Trigger: GCTAAATGCCCCACTTTCTCAGATGGCTTCTAACGA...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGTAGCTAATTACCAGTaGGTACTTCTTCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRVANYQ*VLLHPL
Trigger: CAGGGGATGAAGAAGTACTCACTGGTAATTAGCTAC...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGCTCTCCTACACAGGATaGGCATCCCAAATCCAAAAA +
Preference number: 4 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRLSYTG*ASQIQK
Trigger: TTTTTGGATTTGGGATGCTCATCCTGTGTAGGAGAG...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAAGGCATGGAAGTCTACTaGGAAGCAGAAAAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQGMEVY*EAEKKH
Trigger: GTGCTTCTTTTCTGCTTCTCAGTAGACTTCCATGCC...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGATCAGAAGGAACCTGTaGTCCCAGCTTTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLIRRNL*SQLFLQ
Trigger: CTGAAGGAAAAGCTGGGATCACAGGTTCCTTCTGAT...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGCAGCCCTTGTTTCTGTaGGGTCCTGCTTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLQPLFL*GPAFAE
Trigger: TTCTGCAAAAGCAGGACCTCACAGAAACAAGGGCTG...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATGGCAAGAAGTGGCACTaGATACATTACTACAAACCC +
Preference number: 4 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYGKKWH*IHYYKP
Trigger: GGGTTTGTAGTAATGTATTCAGTGCCACTTCTTGCC...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR GCA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCTACTTCTTCATCCCCTaGCAGAGGCATGGACTTACT +
Preference number: 4 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSYFFIP*QRHGLT
Trigger: AGTAAGTCCATGCCTCTGGCAGGGGATGAAGAAGTA...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGCTAGTTCTTTCCAGATaGAATTTGGGTGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLLVLSR*NLGAEA
Trigger: GGCCTCTGCACCCAAATTGCATCTGGAAAGAACTAG...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAAACTCCATGTACCCCATaGTGGCACTCTTATGAGTCT +
Preference number: 4 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQTPCTP*WHSYES
Trigger: AGACTCATAAGAGTGCCAGCATGGGGTACATGGAGT...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTCCAGGCCATTGGCCTTaGAAATGGATGCCAATAGTC +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPPGHWP*KWMPIV
Trigger: GACTATTGGCATCCATTTGCAAGGCCAATGGCCTGG...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGTTAACACTGTCGTCTTaGCCTCCCTCCAACTCCTCA +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLLTLSS*PPSNSS
Trigger: TGAGGAGTTGGAGGGAGGGCAAGACGACAGTGTTAA...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGTTTGCTTCTTTTTCTTaGGCTACAGCTAAAGTATCA +
Preference number: 4 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGFASFS*ATAKVS
Trigger: TGATACTTTAGCTGTAGCCCAAGAAAAAGAAGCAAA...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGGTCAGCACAACAATGTaGCACTCTCGTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLVSTTM*HSRSPF
Trigger: GAAAGGAGAACGAGAGTGCCACATTGTTGTGCTGAC...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGATATTCCTCCCCCATTaGTGGAGGGTGGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLIFLPH*WRVVFI
Trigger: GATGAAGACCACCCTCCACCAATGGGGGAGGAATAT...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGTTTTCCCATGACATCTaGATGAAGGGGCGTTGTACA +
Preference number: 4 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRFSHDI*MKGRCT
Trigger: TGTACAACGCCCCTTCATCCAGATGTCATGGGAAAA...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CCA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATGAACTGAAGATTTGCTaGCTGAGAGGCATAGTCAAG +
Preference number: 4 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYELKIC*LRGIVK
Trigger: CTTGACTATGCCTCTCAGCCAGCAAATCTTCAGTTC...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR CCA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGGTTGTACTCTCTTCCTaGTCCAAACATCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLVVLSS*SKHPSQ
Trigger: CTGGGAAGGATGTTTGGACCAGGAAGAGAGTACAAC...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR CCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTCCAACTGGCCTGATTTaGAGAGGTCCTTCTACTTGC +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPPTGLI*RGPSTC
Trigger: GCAAGTAGAAGGACCTCTCCAAATCAGGCCAGTTGG...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATCATTGGCCTTGCAAATaGATGCCAATAGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDHWPCK*MPIVIR
Trigger: CCTGATGACTATTGGCATCCATTTGCAAGGCCAATG...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTTGCCTCTTACCCATCTaGCCAGGAACCAACTCTGAA +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPCLLPI*PGTNSE
Trigger: TTCAGAGTTGGTTCCTGGCCAGATGGGTAAGAGGCA...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR CAA 72 bp CAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTaGCCGATTTCTCTGGCTAAAATATCAACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QDSKLQIRVNLG*PISLAKISTAW
Trigger: CCAGGCTGTTGATATTTTAGCCAGAGAAATCGGCAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTTAGGCCCCGTTCCTTTAACACTGTTTTTGCAACATCCCTATTCTCAATATATCCTGAACTGTCCGTTTaGTCAGAGAGAAATCTCGTC +
Preference number: 4 (lower is better)
Translates to: FRPRSFNTVFATSLFSIYPELSV*SERNLV
Trigger: GACGAGATTTCTCTCTGATCAAACGGACAGTTCAGG...ATATATTGAGAATAGGGATGTTGCAAAAACAGTGTTAAAGGAACGGGGCCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR TCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGTTCATCCTTAGATTCTaGGTCCTGAACTGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRFILRF*VLNCPF
Trigger: AAACGGACAGTTCAGGACTCAGAATCTAAGGATGAA...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGATTATGAGGACCAGATaGAGCCAGGCTGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLIMRTR*SQAVCF
Trigger: GAAGCAAACAGCCTGGCTTCATCTGGTCCTCATAAT...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGAAAGCACTCAGATCTTaGCATCGGATAGTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRKALRS*HRIVLK
Trigger: CTTCAACACTATCCGATGTCAAGATCTGAGTGCTTT...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR TCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTCCCATGACATCTGGATaGAGGGGCGTTGTACATAAT +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPPMTSG*RGVVHN
Trigger: ATTATGTACAACGCCCCTTCATCCAGATGTCATGGG...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAAGTAGCTAATTACCAGTaGGTACTTCTTCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQVANYQ*VLLHPL
Trigger: CAGGGGATGAAGAAGTACTCACTGGTAATTAGCTAC...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATCCGGATGAGCAGTaGAAATCTGTGGATTCACAA +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDYPDEQ*KSVDSQ
Trigger: TTGTGAATCCACAGATTTTCACTGCTCATCCGGATA...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR TCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGAGCATGGTATCCGGATaGGCAGTGAAAATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLSMVSG*AVKICG
Trigger: TCCACAGATTTTCACTGCTCATCCGGATACCATGCT...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR TCA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACTACACAAAGACTCAATaGACAGCACCAGACCCAAAT +
Preference number: 4 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDYTKTQ*TAPDPN
Trigger: ATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTA...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACTTTGGACATTCTGAATaGGACCCTAGTTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDFGHSE*DPSSFQ
Trigger: CTGGAAAGAACTAGGGTCTCATTCAGAATGTCCAAA...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGGGGAAACCATTAAATaGTCTGACTTAACACTGTCG +
Preference number: 4 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRGETIK*SDLTLS
Trigger: CGACAGTGTTAAGTCAGATCATTTAATGGTTTCCCC...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTGTGCGAAATACAGTTaGACTGATGCCTTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDCAKYS*TDAFSN
Trigger: ATTGCTGAAGGCATCAGTGCAACTGTATTTCGCACA...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR GCA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCCGTCACTTTCTCTGGTaGTTGGGAATGGGAATTACT +
Preference number: 4 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSRHFLW*LGMGIT
Trigger: AGTAATTCCCATTCCCAAGCACCAGAGAAAGTGACG...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR GCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTCACAACAAAACGTGTaGCATCTACAAGAAGCGTCA +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDSQQNV*HLQEAS
Trigger: TGACGCTTCTTGTAGATGGCACACGTTTTGTTGTGA...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR GCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTTCCACAGCAATGTGCTaGTCCAGAGTGTTAAGACCT +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPSTAMC*SRVLRP
Trigger: AGGTCTTAACACTCTGGAGCAGCACATTGCTGTGGA...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGTCCACAGCAATGTGCTaGTCCAGAGTGTTAAGACCT +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLSTAMC*SRVLRP
Trigger: AGGTCTTAACACTCTGGAGCAGCACATTGCTGTGGA...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATATATCCACAGCAATGTaGTGCTCCAGAGTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDISTAM*CSRVLR
Trigger: TCTTAACACTCTGGAGCAGCACATTGCTGTGGATAT...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATGGGTTAATCTTGGCTTaGCGATTTCTCTGGCTAAAA +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDGLILA*RFLWLK
Trigger: TTTTAGCCAGAGAAATCGGCAAGCCAAGATTAACCC...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATGTTGTACTCTCTTCCTaGTCCAAACATCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDVVLSS*SKHPSF
Trigger: GAATGAAGGATGTTTGGACCAGGAAGAGAGTACAAC...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536244.5
CDS-3UTR CCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATAGTATCTCTAAGATCTaGGATAGAGATGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDSISKI*DRDAIR
Trigger: CCTGATGGCATCTCTATCCCAGATCTTAGAGATACT...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR CCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGGTCAGCACAACAATGTaGCACTCTCGTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLVSTTM*HSRSPF
Trigger: GAAAGGAGAACGAGAGTGCCACATTGTTGTGCTGAC...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGAGGACAGTCATTAAATaGAATCGAGTAGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LHKDSMNSTRPKFFKLPGRTVIK*NRVASP
Trigger: AGGAGAGGCTACTCGATTCCATTTAATGACTGTCCT...CCCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAACCAATAGTCATCAGGTaGGGGATAGCTCAGTTTAAC +
Preference number: 4 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQPIVIR*GIAQFN
Trigger: GTTAAACTGAGCTATCCCCCACCTGATGACTATTGG...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAATTAGATTCTGAGTCCTaGACTGTCCGTTTGATCAGA +
Preference number: 4 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQLDSES*TVRLIR
Trigger: TCTGATCAAACGGACAGTTCAGGACTCAGAATCTAA...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAATTCATCCTTAGATTCTaGGTCCTGAACTGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQFILRF*VLNCPF
Trigger: AAACGGACAGTTCAGGACTCAGAATCTAAGGATGAA...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR TCA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGGAAATACAGTTGCACTaGTGCCTTCAGCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLEIQLH*CLQQSH
Trigger: ATGAGATTGCTGAAGGCATCAGTGCAACTGTATTTC...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR TCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTCTCTCCTACACAGGATaGGCATCCCAAATCCAAAAA +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPLSYTG*ASQIQK
Trigger: TTTTTGGATTTGGGATGCTCATCCTGTGTAGGAGAG...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACCTTGACTTCCTTTCCTaGTTTTGCAGTTACACAAAG +
Preference number: 4 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDLDFLS*FCSYTK
Trigger: CTTTGTGTAACTGCAAAAGCAGGAAAGGAAGTCAAG...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATAGAGGTCCTTCTACTTaGATTGTGAGTTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYRGPST*IVSFIP
Trigger: TGGAATGAAACTCACAATGCAAGTAGAAGGACCTCT...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGCTTTCAGATTTGGGGTaGTCAACTGTTAAGTATTCC +
Preference number: 4 (lower is better)
Translates to: LHKDSMNSTRPKFFKLPGLSDLG*STVKYS
Trigger: GGAATACTTAACAGTTGAGCACCCCAAATCTGAAAG...CCCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCGTGATGCTAGTCACATaGAGAGAACGTAAGAACACT +
Preference number: 4 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSVMLVT*RERKNT
Trigger: AGTGTTCTTACGTTCTCTGCATGTGACTAGCATCAC...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACACAGTGTCAAGTATATaGCATACTTCATACCTGGCA +
Preference number: 4 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDTVSSI*HTSYLA
Trigger: TGCCAGGTATGAAGTATGGCATATACTTGACACTGT...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATATCAACAGCCTGGCTTaGTTATTTAGGCACTTAGAA +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDINSLA*LFRHLE
Trigger: TTCTAAGTGCCTAAATAAGCAAGCCAGGCTGTTGAT...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGCTGGCCAAAAACCCTTaGTTTTTAACTTCGATTGAC +
Preference number: 4 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRLAKNP*FLTSID
Trigger: GTCAATCGAAGTTAAAAAGCAAGGGTTTTTGGCCAG...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGTGCATTAATATCTCCTaGTCCTCCAAGACATCATCT +
Preference number: 4 (lower is better)
Translates to: LHKDSMNSTRPKFFKLPGCINIS*SSKTSS
Trigger: AGATGATGTCTTGGAGGACCAGGAGATATTAATGCA...CCCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CCA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTGCATTAATATCTCCTaGTCCTCCAAGACATCATCT +
Preference number: 4 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDCINIS*SSKTSS
Trigger: AGATGATGTCTTGGAGGACCAGGAGATATTAATGCA...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGTGGTCCCTAGCATTTTaGATAAGAGATACTCAACCT +
Preference number: 4 (lower is better)
Translates to: LHKDSMNSTRPKFFKLPGWSLAF*IRDTQP
Trigger: AGGTTGAGTATCTCTTATCCAAAATGCTAGGGACCA...CCCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGAGGACAGTCATTAAATaGAATCGAGTAGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLRTVIK*NRVASP
Trigger: AGGAGAGGCTACTCGATTCCATTTAATGACTGTCCT...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTTCAAACCCCACAGGTTaGGGTCAAATGCATGTTAAC +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPSNPTG*GQMHVN
Trigger: GTTAACATGCATTTGACCCCAACCTGTGGGGTTTGA...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCGCTTGCCGATTTCTCTaGCTAAAATATCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSACRFL*LKYQQP
Trigger: AGGCTGTTGATATTTTAGCCAGAGAAATCGGCAAGC...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAAGCTTGCCGATTTCTCTaGCTAAAATATCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQACRFL*LKYQQP
Trigger: AGGCTGTTGATATTTTAGCCAGAGAAATCGGCAAGC...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR CAA 72 bp TGGTCTGAATATTTGTTTTACTTAGAGGGGGACCCTTaGGGCAACTTATTTGCAAACACATCTAACCTTCCT +
Preference number: 4 (lower is better)
Translates to: WSEYLFYLEGDP*GNLFANTSNLP
Trigger: AGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAAGTAAAACAAATATTCAGACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGTTCATCCTTAGATTCTaGGTCCTGAACTGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLFILRF*VLNCPF
Trigger: AAACGGACAGTTCAGGACTCAGAATCTAAGGATGAA...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTGAAATACAGTTGCACTaGTGCCTTCAGCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPEIQLH*CLQQSH
Trigger: ATGAGATTGCTGAAGGCATCAGTGCAACTGTATTTC...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR TCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTTTCCTACCCAATGTGTaGGCAGCTATTAGGCTATTT +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPFLPNV*AAIRLF
Trigger: AAATAGCCTAATAGCTGCTCACACATTGGGTAGGAA...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTCCCTTCCTTTGGGGATaGCATTGGTATAATATTCCT +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPPFLWG*HWYNIP
Trigger: AGGAATATTATACCAATGTCATCCCCAAAGGAAGGG...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR TCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGTGGCTCCATCTCCCATaGAAGCATCATATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLWLHLP*KHHICF
Trigger: AAAGCAAATATGATGCTTTCATGGGAGATGGAGCCA...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR GCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGTGTGCGAAATACAGTTaGACTGATGCCTTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLCAKYS*TDAFSN
Trigger: ATTGCTGAAGGCATCAGTGCAACTGTATTTCGCACA...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR GCA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATTTCCTTTCCTGCTTTTaGAGTTACACAAAGACTCAA +
Preference number: 4 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYFLSCF*SYTKTQ
Trigger: TTGAGTCTTTGTGTAACTGCAAAAGCAGGAAAGGAA...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGGGGTTAATCTTGGCTTaGCGATTTCTCTGGCTAAAA +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLGLILA*RFLWLK
Trigger: TTTTAGCCAGAGAAATCGGCAAGCCAAGATTAACCC...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGGGGTACTGCATATTGTaGAGTAAATCTGGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLGYCIL*SKSGLL
Trigger: AAGCAAGCCAGATTTACTGCACAATATGCAGTACCC...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTAGTATCTCTAAGATCTaGGATAGAGATGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPSISKI*DRDAIR
Trigger: CCTGATGGCATCTCTATCCCAGATCTTAGAGATACT...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR CCA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACAGAATCTGTAGAGCTTaGAGCTATAAAGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDRICRA*SYKEFG
Trigger: CCCAAATTCTTTATAGCTCCAAGCTCTACAGATTCT...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGAGAATCTGTAGAGCTTaGAGCTATAAAGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRRICRA*SYKEFG
Trigger: CCCAAATTCTTTATAGCTCCAAGCTCTACAGATTCT...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGCAATAAAAGGTTCATaGTTCCGTTTATTCCCACTT +
Preference number: 4 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRAIKGS*FRLFPL
Trigger: AAGTGGGAATAAACGGAACCATGAACCTTTTATTGC...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR CCA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAAATATCTAAGGTCTCCTaGACATATCCACAGCAATGT +
Preference number: 4 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQISKVS*TYPQQC
Trigger: ACATTGCTGTGGATATGTCCAGGAGACCTTAGATAT...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCATATCTAAGGTCTCCTaGACATATCCACAGCAATGT +
Preference number: 4 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSISKVS*TYPQQC
Trigger: ACATTGCTGTGGATATGTCCAGGAGACCTTAGATAT...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCTGGTCCCTAGCATTTTaGATAAGAGATACTCAACCT +
Preference number: 4 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSWSLAF*IRDTQP
Trigger: AGGTTGAGTATCTCTTATCCAAAATGCTAGGGACCA...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAATGGTCCCTAGCATTTTaGATAAGAGATACTCAACCT +
Preference number: 4 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQWSLAF*IRDTQP
Trigger: AGGTTGAGTATCTCTTATCCAAAATGCTAGGGACCA...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGACACTTTTTCAGCCCTaGAAAGAGCTTTCAACATCT +
Preference number: 4 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLTLFQP*KELSTS
Trigger: AGATGTTGAAAGCTCTTTCCAGGGCTGAAAAAGTGT...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATAAAATATCAACAGCCTaGCTTGCTTATTTAGGCACT +
Preference number: 4 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYKISTA*LAYLGT
Trigger: AGTGCCTAAATAAGCAAGCCAGGCTGTTGATATTTT...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGAAAATATCAACAGCCTaGCTTGCTTATTTAGGCACT +
Preference number: 4 (lower is better)
Translates to: LHKDSMNSTRPKFFKLPGKISTA*LAYLGT
Trigger: AGTGCCTAAATAAGCAAGCCAGGCTGTTGATATTTT...CCCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACAAAATATCAACAGCCTaGCTTGCTTATTTAGGCACT +
Preference number: 4 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDKISTA*LAYLGT
Trigger: AGTGCCTAAATAAGCAAGCCAGGCTGTTGATATTTT...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCAGTAGTACTGGGTACTaGATATTGTGCAGTAAATCT +
Preference number: 4 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSSSTGY*ILCSKS
Trigger: AGATTTACTGCACAATATGCAGTACCCAGTACTACT...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGTTTGCTTCTTTTTCTTaGGCTACAGCTAAAGTATCA +
Preference number: 4 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRFASFS*ATAKVS
Trigger: TGATACTTTAGCTGTAGCCCAAGAAAAAGAAGCAAA...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CCA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGTCATTAGACAGTTCATaGAGTAAAGCACTCAGATCT +
Preference number: 4 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLSLDSS*SKALRS
Trigger: AGATCTGAGTGCTTTACTCCATGAACTGTCTAATGA...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR CCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTACACTTTTTCAGCCCTaGAAAGAGCTTTCAACATCT +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPTLFQP*KELSTS
Trigger: AGATGTTGAAAGCTCTTTCCAGGGCTGAAAAAGTGT...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
3UTR CAA 72 bp AAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTaGGCTTGCCGATTTCTCTGGCTAAAATATCAACAG +
Preference number: 4 (lower is better)
Translates to: KLKILNFRFGLI*ACRFLWLKYQQ
Trigger: CTGTTGATATTTTAGCCAGAGAAATCGGCAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR GCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGGCAGTAAATCTGGCTTaGTTTCTTAACCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLAVNLA*FLNLFA
Trigger: AGCAAAAAGGTTAAGAAAGCAAGCCAGATTTACTGC...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCCTTTCAACATCTACCTaGCTTTTATCTTTGGATGAT +
Preference number: 4 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSLSTST*LLSLDD
Trigger: ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAG...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTCTTTCAACATCTACCTaGCTTTTATCTTTGGATGAT +
Preference number: 4 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPLSTST*LLSLDD
Trigger: ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAG...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CCA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGCTTTCAACATCTACCTaGCTTTTATCTTTGGATGAT +
Preference number: 4 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLLSTST*LLSLDD
Trigger: ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAG...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS CCA 90 bp ATTCCTTGCACTCGTCGCTCCCCGCCGCGCTGTCCCGCTCGGGGCTaGAATCCGCCCGGGAGGCGCGCGCAGGCCGCGCAGCCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: IPCTRRSPPRCPARG*NPPGRRAQAAQPEA
Trigger: GGCTTCTGGCTGCGCGGCCTGCGCGCGCCTCCCGGGCGGATTCCAGCCCCGAGCGGGACAGCGCGGCGGGGAGCGACGAGTGCAAGGAAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483557.5
CDS CCA 90 bp AGAGAGAAATCTCGTCGCTCCCCGCCGCGCTGTCCCGCTCGGGGCTaGAATCCGCCCGGGAGGCGCGCGCAGGCCGCGCAGCCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: REKSRRSPPRCPARG*NPPGRRAQAAQPEA
Trigger: GGCTTCTGGCTGCGCGGCCTGCGCGCGCCTCCCGGGCGGATTCCAGCCCCGAGCGGGACAGCGCGGCGGGGAGCGACGAGATTTCTCTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS GCA 90 bp CGGGGCCGCACCGTAAATGGGTGTCGCCTTTCCTCCAGTCCACTCTaGACCCAACCTCAGCGGGCGCACTTTTCTGAGTTGCGCATACCC +
Preference number: 5 (lower is better)
Translates to: RGRTVNGCRLSSSPL*TQPQRAHFSELRIP
Trigger: GGGTATGCGCAACTCAGAAAAGTGCGCCCGCTGAGGTTGGGTGCAGAGTGGACTGGAGGAAAGGCGACACCCATTTACGGTGCGGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536244.5
CDS GCA 90 bp GGACTGCTTAAGCCCGGAGGTCAAAGCTGCAGTGAGCTGAAATCTTaGCACTACACCTCATCTCGTCGCTCCCCGCCGCGCTGTCCCGCT +
Preference number: 5 (lower is better)
Translates to: GLLKPGGQSCSELKS*HYTSSRRSPPRCPA
Trigger: AGCGGGACAGCGCGGCGGGGAGCGACGAGATGAGGTGTAGTGGCAAGATTTCAGCTCACTGCAGCTTTGACCTCCGGGCTTAAGCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460983.1
CDS-3UTR CAA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGTGTGAGGTCCTGCTTTaGCAGAATGGCCTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGECEVLL*QNGLPL
Trigger: CAGGGGCAGGCCATTCTGCAAAAGCAGGACCTCACA...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS TCA 90 bp ACGTGGGAGGACTGCTTAAGCCCGGAGGTCAAAGCTGCAGTGAGCTaGAATCTTGCCACTACACCTCATCTCGTCGCTCCCCGCCGCGCT +
Preference number: 5 (lower is better)
Translates to: TWEDCLSPEVKAAVS*NLATTPHLVAPRRA
Trigger: AGCGCGGCGGGGAGCGACGAGATGAGGTGTAGTGGCAAGATTTCAGCTCACTGCAGCTTTGACCTCCGGGCTTAAGCAGTCCTCCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460983.1
CDS TCA 90 bp CTGGCAATTTGCGGGTGGCAGGGAAGGAAGACGCGGAAACAGGGCTaGAAAGACCGAGCAAAATGCGCTCGGCTCCAGAGTTCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: LAICGWQGRKTRKQG*KDRAKCARLQSSGG
Trigger: TCCTCCTGAACTCTGGAGCCGAGCGCATTTTGCTCGGTCTTTTCAGCCCTGTTTCCGCGTCTTCCTTCCCTGCCACCCGCAAATTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443316.2
CDS CCA 90 bp AAGGCTTTCCCCAGCTCTTTTGCACTCAGAGCCACGGATGAAAGCTaGCAATTTGCGGGTGGCAGGGAAGGAAGACGCGGAAACAGGGCT +
Preference number: 5 (lower is better)
Translates to: KAFPSSFALRATDES*QFAGGREGRRGNRA
Trigger: AGCCCTGTTTCCGCGTCTTCCTTCCCTGCCACCCGCAAATTGCCAGCTTTCATCCGTGGCTCTGAGTGCAAAAGAGCTGGGGAAAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443316.2
CDS-3UTR CAA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCTGTGAGGTCCTGCTTTaGCAGAATGGCCTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: MSPTQGETNHEGGLAAGICEVLL*QNGLPL
Trigger: CAGGGGCAGGCCATTCTGCAAAAGCAGGACCTCACA...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp GGTGGAGGGTGGTCTTCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACATTGGGCCGAGTGAAGTaGTACTCTCTTCCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: GGGWSSSQSTESSSVSTTLGRVK*YSLPGP
Trigger: TGGACCAGGAAGAGAGTACAACTTCACTCGGCCCAA...TGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGAAGACCACCCTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CAA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGCTAATGAGCATCCGATaGGTGTCTGCTTTTAGAAGT +
Preference number: 5 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGELMSIR*VSAFRS
Trigger: ACTTCTAAAAGCAGACACCAATCGGATGCTCATTAG...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCAATATTCCTCCCCCATaGGTGGAGGGTGGTCTTCAT +
Preference number: 5 (lower is better)
Translates to: MSPTQGETNHEGGLAAGINIPPP*VEGGLH
Trigger: ATGAAGACCACCCTCCACCAATGGGGGAGGAATATT...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CAA 90 bp GGTCCTGCTTTTGCAGAATGGCCTGCCCCTGGGACTGGAGCAGGCTTGGGTGAGTTAGACTCCGAAACCTaGAAGCTAAAAAGGTCTCAT +
Preference number: 5 (lower is better)
Translates to: GPAFAEWPAPGTGAGLGELDSET*KLKRSH
Trigger: ATGAGACCTTTTTAGCTTCAAGGTTTCGGAGTCTAA...CTCACCCAAGCCTGCTCCAGTCCCAGGGGCAGGCCATTCTGCAAAAGCAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS TCA 90 bp CACTGTCACTGCCACGGTGAACATTCATCCTTAGATTCTGAGTCCTaGACTGTCCGTTTGATCAGAGAGAAATCTCGTCGCTCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: HCHCHGEHSSLDSES*TVRLIREKSRRSPP
Trigger: CGGCGGGGAGCGACGAGATTTCTCTCTGATCAAACGGACAGTTCAGGACTCAGAATCTAAGGATGAATGTTCACCGTGGCAGTGACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CAA 90 bp TCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACAATGTGGCACTCTCGTTTGGGCCGAGTGAAGTaGTACTCTCTTCCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: SSQSTESSSVSTTMWHSRLGRVK*YSLPGP
Trigger: TGGACCAGGAAGAGAGTACAACTTCACTCGGCCCAA...ACGAGAGTGCCACATTGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CAA 90 bp CTCCTGGTCCTCCAAGACATCATCTCCAGCAGCTACCAGATTCGTGAGGGATTTTCTCGTTCTCCTTTCTaGGCACAGCCCACCATGATG +
Preference number: 5 (lower is better)
Translates to: LLVLQDIISSSYQIREGFSRSPF*AQPTMM
Trigger: CATCATGGTGGGCTGTGCCAAGAAAGGAGAACGAGA...AAATCCCTCACGAATCTGGTAGCTGCTGGAGATGATGTCTTGGAGGACCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CAA 90 bp GGTGGTCTTCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACAATGTGGCAGGATAAGGACTGCTTaGCTAAGCACGAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: GGLHPSPQNPHPSAQQCGRIRTA*LSTRQQ
Trigger: CTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCT...GCCACATTGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGAAGACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481911.5
CDS-3UTR CAA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTCGGGTTAATCTTGGCTaGCCGATTTCTCTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSRVNLG*PISLAK
Trigger: TTTAGCCAGAGAAATCGGCAAGCCAAGATTAACCCG...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCCTTAACACTGTCGTCTaGCCCTCCCTCCAACTCCTC +
Preference number: 5 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSLNTVV*PSLQLL
Trigger: GAGGAGTTGGAGGGAGGGCAAGACGACAGTGTTAAG...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTTTAGAGGGGGACCCTTaGGGCAACTTATTTGCAAAC +
Preference number: 5 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSLEGDP*GNLFAN
Trigger: GTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTGCGCACTTTTCTGAGTaGCGCATACCCTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSAHFSE*RIPSQL
Trigger: TAATTGAGAGGGTATGCGCAACTCAGAAAAGTGCGC...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536244.5
CDS TCA 90 bp TTCCTCCAGTCCACTCTGCACCCAACCTCAGCGGGCGCACTTTTCTaGGTTGCGCATACCCTCTCAATTATTAAAGGTTGCAGACGGAAA +
Preference number: 5 (lower is better)
Translates to: FLQSTLHPTSAGALF*VAHTLSIIKGCRRK
Trigger: TTTCCGTCTGCAACCTTTAATAATTGAGAGGGTATGCGCAACTCAGAAAAGTGCGCCCGCTGAGGTTGGGTGCAGAGTGGACTGGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536244.5
CDS-3UTR CAA 90 bp GGTGGAGGGTGGTCTTCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACAATGAAGCCAGGCTGTTaGCTTCTTTTTCTTGGGCTA +
Preference number: 5 (lower is better)
Translates to: GGGWSSSQSTESSSVSTTMKPGC*LLFLGL
Trigger: TAGCCCAAGAAAAAGAAGCAAACAGCCTGGCTTCAT...TGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGAAGACCACCCTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CAA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATCCCAACTGGCCTGATTaGGAGAGGTCCTTCTACTTG +
Preference number: 5 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDPNWPD*ERSFYL
Trigger: CAAGTAGAAGGACCTCTCCAAATCAGGCCAGTTGGG...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp CCACAGCTGGCCCTAATCCTGAAAGTCGTTAGAAGCCATCTGAGAAAGTGGGGCATGAAGCCAGGCTGTTaGCTTCTTTTTCTTGGGCTA +
Preference number: 5 (lower is better)
Translates to: PQLALILKVVRSHLRKWGMKPGC*LLFLGL
Trigger: TAGCCCAAGAAAAAGAAGCAAACAGCCTGGCTTCAT...GCCCCACTTTCTCAGATGGCTTCTAACGACTTTCAGGATTAGGGCCAGCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CAA 90 bp GTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGAAGCCATCTGAGAAAGTACTCTCCCTTCTCATaGGGCCGAGTGAAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: VDPQLALILKVVRSHLRKYSPFS*GRVKLY
Trigger: GTACAACTTCACTCGGCCCAATGAGAAGGGAGAGTA...CTTTCTCAGATGGCTTCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CAA 90 bp GAGGGATTTGCTTCGAACACACTGGAAATCCACATGGCGACTCTTCCCTTCTTCAATATTCCTCCCCCATaGGTGGAGGGTGGTCTTCAT +
Preference number: 5 (lower is better)
Translates to: EGFASNTLEIHMATLPFFNIPPP*VEGGLH
Trigger: ATGAAGACCACCCTCCACCAATGGGGGAGGAATATT...GAAGAAGGGAAGAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CAA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTGGAGCTATAAAGAATTaGGGAATATTCCTCCCCCAT +
Preference number: 5 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSGAIKN*GIFLPH
Trigger: ATGGGGGAGGAATATTCCCAAATTCTTTATAGCTCC...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp ATCTGGCCAGGAACCAACTCTGAAGGGGGTGACCTCAACCCAGCCCTTGTTTCTCTGGATGAAGGGGCGTaGTACATAATTATAGATGAC +
Preference number: 5 (lower is better)
Translates to: IWPGTNSEGGDLNPALVSLDEGA*YIIIDD
Trigger: GTCATCTATAATTATGTACAACGCCCCTTCATCCAG...AGAAACAAGGGCTGGGTTGAGGTCACCCCCTTCAGAGTTGGTTCCTGGCCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp ATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGGGCTGGCTGCAGGCATCCTAATGAGCATCCGATaGGTGTCTGCTTTTAGAAGT +
Preference number: 5 (lower is better)
Translates to: MSPTQGETNHEGGLAAGILMSIR*VSAFRS
Trigger: ACTTCTAAAAGCAGACACCAATCGGATGCTCATTAG...GATGCCTGCAGCCAGCCCTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CAA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTTCTCGTTCTCCTTTCTaGGCACAGCCCACCATGATG +
Preference number: 5 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFSRSPF*AQPTMM
Trigger: CATCATGGTGGGCTGTGCCAAGAAAGGAGAACGAGA...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CAA 90 bp CTCCAACAAGGAGTAGACCCACAGCTGGCCCTAATCCTGAAAGTCGTTAGAAGCAGATTCGTGAGGGATTaGCTTCGAACACACTGGAAA +
Preference number: 5 (lower is better)
Translates to: LQQGVDPQLALILKVVRSRFVRD*LRTHWK
Trigger: TTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCT...GCTTCTAACGACTTTCAGGATTAGGGCCAGCTGTGGGTCTACTCCTTGTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CAA 90 bp GGTGGTCTTCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACAATGTGGCTTCAGTTTGGTCCCTTaGCTACTAAGCAATTTGCCT +
Preference number: 5 (lower is better)
Translates to: GGLHPSPQNPHPSAQQCGFSLVP*LLSNLP
Trigger: AGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAA...GCCACATTGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGAAGACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481911.5
CDS-3UTR CAA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGTCCAGGCCATTGGCCTaGCAAATGGATGCCAATAGT +
Preference number: 5 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGSRPLA*QMDANS
Trigger: ACTATTGGCATCCATTTGCAAGGCCAATGGCCTGGA...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCCGGGTTAATCTTGGCTaGCCGATTTCTCTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSRVNLG*PISLAK
Trigger: TTTAGCCAGAGAAATCGGCAAGCCAAGATTAACCCG...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCAGATTCGGGTTAATCTaGGCTTGCCGATTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSRFGLI*ACRFLW
Trigger: CCAGAGAAATCGGCAAGCCAAGATTAACCCGAATCT...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCTTAGAGGGGGACCCTTaGGGCAACTTATTTGCAAAC +
Preference number: 5 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSLEGDP*GNLFAN
Trigger: GTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS TCA 90 bp CACTGTCACTGCCACGGTGAACATTCATCCTTAGATTCTGAGTCCTaGACTGTCCGTTTGATCAGAGAGAAATCCTGTAGTCCCAGCTAC +
Preference number: 5 (lower is better)
Translates to: HCHCHGEHSSLDSES*TVRLIREKSCSPSY
Trigger: GTAGCTGGGACTACAGGATTTCTCTCTGATCAAACGGACAGTTCAGGACTCAGAATCTAAGGATGAATGTTCACCGTGGCAGTGACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460983.1
CDS-3UTR CAA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGATGAAGCCAGGCTGTTaGCTTCTTTTTCTTGGGCTA +
Preference number: 5 (lower is better)
Translates to: KVRGEACLLLKVRQITREMKPGC*LLFLGL
Trigger: TAGCCCAAGAAAAAGAAGCAAACAGCCTGGCTTCAT...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CAA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTAATATTCCTCCCCCATaGGTGGAGGGTGGTCTTCAT +
Preference number: 5 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFNIPPP*VEGGLH
Trigger: ATGAAGACCACCCTCCACCAATGGGGGAGGAATATT...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CAA 90 bp TTCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACAATGTGGCACTCTCGGGAGCTATAAAGAATTaGGGAATATTCCTCCCCCAT +
Preference number: 5 (lower is better)
Translates to: FIPVHRILIRQHNNVALSGAIKN*GIFLPH
Trigger: ATGGGGGAGGAATATTCCCAAATTCTTTATAGCTCC...CGAGAGTGCCACATTGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CAA 90 bp CTCCTGGTCCTCCAAGACATCATCTCCAGCAGCTACCAGATTCGTGAGGGATTTCTGGATGAAGGGGCGTaGTACATAATTATAGATGAC +
Preference number: 5 (lower is better)
Translates to: LLVLQDIISSSYQIREGFLDEGA*YIIIDD
Trigger: GTCATCTATAATTATGTACAACGCCCCTTCATCCAG...AAATCCCTCACGAATCTGGTAGCTGCTGGAGATGATGTCTTGGAGGACCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CAA 90 bp GAGGGATTTGCTTCGAACACACTGGAAATCCACATGGCGACTCTTCCCTTCTTCAGATTCGTGAGGGATTaGCTTCGAACACACTGGAAA +
Preference number: 5 (lower is better)
Translates to: EGFASNTLEIHMATLPFFRFVRD*LRTHWK
Trigger: TTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCT...GAAGAAGGGAAGAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CAA 90 bp TTCATCCCAGTCCACAGAATCCTCATCCGTCAGCACAACAATGTGGCACTCTCGCTAATGAGCATCCGATaGGTGTCTGCTTTTAGAAGT +
Preference number: 5 (lower is better)
Translates to: FIPVHRILIRQHNNVALSLMSIR*VSAFRS
Trigger: ACTTCTAAAAGCAGACACCAATCGGATGCTCATTAG...CGAGAGTGCCACATTGTTGTGCTGACGGATGAGGATTCTGTGGACTGGGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481911.5
CDS CCA 90 bp CGTGTGCCATCTACAAGAAGCGTCACTTTCTCTGGTGCTTGGGAATaGGAATTACTGCCAAAGCCCACACTACTGTTTCCAAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: RVPSTRSVTFSGAWE*ELLPKPTLLFPNLS
Trigger: AGAAAGATTTGGAAACAGTAGTGTGGGCTTTGGCAGTAATTCCCATTCCCAAGCACCAGAGAAAGTGACGCTTCTTGTAGATGGCACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR CAA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGATGAAGCCAGGCTGTTaGCTTCTTTTTCTTGGGCTA +
Preference number: 5 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGMKPGC*LLFLGL
Trigger: TAGCCCAAGAAAAAGAAGCAAACAGCCTGGCTTCAT...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATCTGGATGAAGGGGCGTaGTACATAATTATAGATGAC +
Preference number: 5 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDLDEGA*YIIIDD
Trigger: GTCATCTATAATTATGTACAACGCCCCTTCATCCAG...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAATGTGAGGTCCTGCTTTaGCAGAATGGCCTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQCEVLL*QNGLPL
Trigger: CAGGGGCAGGCCATTCTGCAAAAGCAGGACCTCACA...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTTCCTGTCTCAGCCTCTaGAGTGGCTGGGACCACAGG +
Preference number: 5 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPSCLSL*SGWDHR
Trigger: CCTGTGGTCCCAGCCACTCAAGAGGCTGAGACAGGA...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS CCA 90 bp ACAAAACGTGTGCCATCTACAAGAAGCGTCACTTTCTCTGGTGCTTaGGAATGGGAATTACTGCCAAAGCCCACACTACTGTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: TKRVPSTRSVTFSGA*EWELLPKPTLLFPN
Trigger: ATTTGGAAACAGTAGTGTGGGCTTTGGCAGTAATTCCCATTCCCAAGCACCAGAGAAAGTGACGCTTCTTGTAGATGGCACACGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR CAA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACTCTCGTTCTCCTTTCTaGGCACAGCCCACCATGATG +
Preference number: 5 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDSRSPF*AQPTMM
Trigger: CATCATGGTGGGCTGTGCCAAGAAAGGAGAACGAGA...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGTCTCGTTCTCCTTTCTaGGCACAGCCCACCATGATG +
Preference number: 5 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRSRSPF*AQPTMM
Trigger: CATCATGGTGGGCTGTGCCAAGAAAGGAGAACGAGA...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CAA 90 bp GGGCATTTAGCCGGTCAAGTTCATCCACTTGGGGTGGGTGATGCATTAATATCTCTGGATGAAGGGGCGTaGTACATAATTATAGATGAC +
Preference number: 5 (lower is better)
Translates to: GHLAGQVHPLGVGDALISLDEGA*YIIIDD
Trigger: GTCATCTATAATTATGTACAACGCCCCTTCATCCAG...AGATATTAATGCATCACCCACCCCAAGTGGATGAACTTGACCGGCTAAATGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CAA 90 bp AAGGTTAGGGGAGAAGCATGTCTCCTACTCAAGGTGAGACAAATCACGAGGGAGTTAGACTCCGAAACCTaGAAGCTAAAAAGGTCTCAT +
Preference number: 5 (lower is better)
Translates to: KVRGEACLLLKVRQITRELDSET*KLKRSH
Trigger: ATGAGACCTTTTTAGCTTCAAGGTTTCGGAGTCTAA...CTCCCTCGTGATTTGTCTCACCTTGAGTAGGAGACATGCTTCTCCCCTAACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp AAGGATAAGGACTGCTTTGCTAAGCACGAGGCAACAGGAGTCTTGACTTCCTTTGAGAGGTCCTTCTACTaGCATTGTGAGTTTCATTCC +
Preference number: 5 (lower is better)
Translates to: KDKDCFAKHEATGVLTSFERSFY*HCEFHS
Trigger: GGAATGAAACTCACAATGCAAGTAGAAGGACCTCTC...AAAGGAAGTCAAGACTCCTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACCCCAACTGGCCTGATTaGGAGAGGTCCTTCTACTTG +
Preference number: 5 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDPNWPD*ERSFYL
Trigger: CAAGTAGAAGGACCTCTCCAAATCAGGCCAGTTGGG...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTACGGGTTAATCTTGGCTaGCCGATTTCTCTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLRVNLG*PISLAK
Trigger: TTTAGCCAGAGAAATCGGCAAGCCAAGATTAACCCG...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCCTTAACACTGTCGTCTaGCCCTCCCTCCAACTCCTC +
Preference number: 5 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSLNTVV*PSLQLL
Trigger: GAGGAGTTGGAGGGAGGGCAAGACGACAGTGTTAAG...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS TCA 90 bp CACTGTCACTGCCACGGTGAACATTCATCCTTAGATTCTGAGTCCTaGACTGTCCGTTTGATCAGAGAGAAATCCTGGAACAGCAAAATA +
Preference number: 5 (lower is better)
Translates to: HCHCHGEHSSLDSES*TVRLIREKSWNSKI
Trigger: TATTTTGCTGTTCCAGGATTTCTCTCTGATCAAACGGACAGTTCAGGACTCAGAATCTAAGGATGAATGTTCACCGTGGCAGTGACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483557.5
CDS-3UTR CAA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCTTGGGCCGAGTGAAGTaGTACTCTCTTCCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSLGRVK*YSLPGP
Trigger: TGGACCAGGAAGAGAGTACAACTTCACTCGGCCCAA...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR CAA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGTTGGGCCGAGTGAAGTaGTACTCTCTTCCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLLGRVK*YSLPGP
Trigger: TGGACCAGGAAGAGAGTACAACTTCACTCGGCCCAA...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR CAA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGTACTCTCCCTTCTCATaGGGCCGAGTGAAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRYSPFS*GRVKLY
Trigger: GTACAACTTCACTCGGCCCAATGAGAAGGGAGAGTA...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CAA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGTCTCGTTCTCCTTTCTaGGCACAGCCCACCATGATG +
Preference number: 5 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLSRSPF*AQPTMM
Trigger: CATCATGGTGGGCTGTGCCAAGAAAGGAGAACGAGA...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACTGGAAGCAAGAACCTTaGATGTCTTCAGCAAGGGGC +
Preference number: 5 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDWKQEP*MSSARG
Trigger: GCCCCTTGCTGAAGACATCAAAGGTTCTTGCTTCCA...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR CAA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGCACTTTCTCTGGTGCTaGGGAATGGGAATTACTGCC +
Preference number: 5 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRHFLWC*GMGITA
Trigger: GGCAGTAATTCCCATTCCCAAGCACCAGAGAAAGTG...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR CAA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATAGGATAAGGACTGCTTaGCTAAGCACGAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYRIRTA*LSTRQQ
Trigger: CTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCT...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACAGGATAAGGACTGCTTaGCTAAGCACGAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDRIRTA*LSTRQQ
Trigger: CTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCT...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAACCCAACTGGCCTGATTaGGAGAGGTCCTTCTACTTG +
Preference number: 5 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQPNWPD*ERSFYL
Trigger: CAAGTAGAAGGACCTCTCCAAATCAGGCCAGTTGGG...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp GAGGGGCATAGAAATAAACCTTCCTCTCCATCAGAAGGAACCTGTGATCCCAGCATTTCTGTCCTCATCTaGAAAGCCTTTAAGCCATAT +
Preference number: 5 (lower is better)
Translates to: EGHRNKPSSPSEGTCDPSISVLI*KAFKPY
Trigger: ATATGGCTTAAAGGCTTTCAAGATGAGGACAGAAAT...GCTGGGATCACAGGTTCCTTCTGATGGAGAGGAAGGTTTATTTCTATGCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp CTTTTCCTTCAGTCACCACCACCTCGTGACACTAGAAAGCCTACCGTCACAGATATTTCTGTCCTCATCTaGAAAGCCTTTAAGCCATAT +
Preference number: 5 (lower is better)
Translates to: LFLQSPPPRDTRKPTVTDISVLI*KAFKPY
Trigger: ATATGGCTTAAAGGCTTTCAAGATGAGGACAGAAAT...ATCTGTGACGGTAGGCTTTCTAGTGTCACGAGGTGGTGGTGACTGAAGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp TTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTATTCCACAGTATTCCAGGCCATTGGCCTaGCAAATGGATGCCAATAGT +
Preference number: 5 (lower is better)
Translates to: LGNLFANTSNLPGLIPQYSRPLA*QMDANS
Trigger: ACTATTGGCATCCATTTGCAAGGCCAATGGCCTGGA...ATACTGTGGAATAAGCCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTAACTGGGTACTGCATATaGTGCAGTAAATCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLTGYCI*CSKSGL
Trigger: CAAGCCAGATTTACTGCACAATATGCAGTACCCAGT...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTTGGGCAACTTATTaGCAAACACATCTAACCTTC +
Preference number: 5 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGLWATY*QTHLTF
Trigger: GAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAG...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS TCA 90 bp AAGGTTCATGGTTCCGTTTATTCCCACTTTGGAAGCAAGAACCTTTaGTGTCTTCAGCAAGGGGCATTATGTGAGGGAACTGAAGATTTG +
Preference number: 5 (lower is better)
Translates to: KVHGSVYSHFGSKNL*CLQQGALCEGTEDL
Trigger: CAAATCTTCAGTTCCCTCACATAATGCCCCTTGCTGAAGACATCAAAGGTTCTTGCTTCCAAAGTGGGAATAAACGGAACCATGAACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000483557.5
ENST00000498267.5
CDS-3UTR CAA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGTACTCTCCCTTCTCATaGGGCCGAGTGAAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLYSPFS*GRVKLY
Trigger: GTACAACTTCACTCGGCCCAATGAGAAGGGAGAGTA...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000536244.5
CDS-3UTR CAA 90 bp AGATTTCCAGCTTACTCAAACCCCACAGGTTGGGGTCAAATGCATGTTAACCTAGGAGCTATAAAGAATTaGGGAATATTCCTCCCCCAT +
Preference number: 5 (lower is better)
Translates to: RFPAYSNPTGWGQMHVNLGAIKN*GIFLPH
Trigger: ATGGGGGAGGAATATTCCCAAATTCTTTATAGCTCC...TAGGTTAACATGCATTTGACCCCAACCTGTGGGGTTTGAGTAAGCTGGAAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGAGGATAAGGACTGCTTaGCTAAGCACGAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLRIRTA*LSTRQQ
Trigger: CTGTTGCCTCGTGCTTAGCAAAGCAGTCCTTATCCT...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp TTAGAGGGGGACCCTTTGGGCAACTTATTTGCAAACACATCTAACCTTCCTGGGCTTAAGAATTTCCTTTaGGACATTCTGAATGAGACC +
Preference number: 5 (lower is better)
Translates to: LEGDPLGNLFANTSNLPGLKNFL*DILNET
Trigger: GGTCTCATTCAGAATGTCCAAAAGGAAATTCTTAAG...CCCAGGAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAGGGTCCCCCTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAATCCAGGCCATTGGCCTaGCAAATGGATGCCAATAGT +
Preference number: 5 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQSRPLA*QMDANS
Trigger: ACTATTGGCATCCATTTGCAAGGCCAATGGCCTGGA...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATAGATTCGGGTTAATCTaGGCTTGCCGATTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDRFGLI*ACRFLW
Trigger: CCAGAGAAATCGGCAAGCCAAGATTAACCCGAATCT...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp GTTCTTTCCAGATGCAATTTGGGTGCAGAGGCCACCAAGAATGGCATCTTCATTCTTTGGGCAACTTATTaGCAAACACATCTAACCTTC +
Preference number: 5 (lower is better)
Translates to: VLSRCNLGAEATKNGIFILWATY*QTHLTF
Trigger: GAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAG...AATGAAGATGCCATTCTTGGTGGCCTCTGCACCCAAATTGCATCTGGAAAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp TTTAGGCCCCGTTCCTTTAACACTGTTTTTGCAACATCCCTATTCTCAATATATTACTCTCCCTTCTCATaGGGCCGAGTGAAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: FRPRSFNTVFATSLFSIYYSPFS*GRVKLY
Trigger: GTACAACTTCACTCGGCCCAATGAGAAGGGAGAGTA...ATATATTGAGAATAGGGATGTTGCAAAAACAGTGTTAAAGGAACGGGGCCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265344.8
ENST00000481911.5
CDS-3UTR CAA 90 bp TTTCAGCCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATAGATTCGTGAGGGATTaGCTTCGAACACACTGGAAA +
Preference number: 5 (lower is better)
Translates to: FQPWKELSTSTWLLSLDDRFVRD*LRTHWK
Trigger: TTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCT...ATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGGCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACGAGAGGTCCTTCTACTaGCATTGTGAGTTTCATTCC +
Preference number: 5 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDERSFY*HCEFHS
Trigger: GGAATGAAACTCACAATGCAAGTAGAAGGACCTCTC...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp TTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGACTGGGTACTGCATATaGTGCAGTAAATCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: LHKDSMNSTRPKFFKLPGTGYCI*CSKSGL
Trigger: CAAGCCAGATTTACTGCACAATATGCAGTACCCAGT...CCCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS CCA 90 bp CCCACACTACTGTTTCCAAATCTTTCTGGAGCAATAAAAGGTTCATaGTTCCGTTTATTCCCACTTTGGAAGCAAGAACCTTTGATGTCT +
Preference number: 5 (lower is better)
Translates to: PTLLFPNLSGAIKGS*FRLFPLWKQEPLMS
Trigger: AGACATCAAAGGTTCTTGCTTCCAAAGTGGGAATAAACGGAACCATGAACCTTTTATTGCTCCAGAAAGATTTGGAAACAGTAGTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000483557.5
CDS CCA 90 bp ATGGGAATTACTGCCAAAGCCCACACTACTGTTTCCAAATCTTTCTaGAGCAATAAAAGGTTCATGGTTCCGTTTATTCCCACTTTGGAA +
Preference number: 5 (lower is better)
Translates to: MGITAKAHTTVSKSF*SNKRFMVPFIPTLE
Trigger: TTCCAAAGTGGGAATAAACGGAACCATGAACCTTTTATTGCTCCAGAAAGATTTGGAAACAGTAGTGTGGGCTTTGGCAGTAATTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR CAA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAAATGAAGCCAGGCTGTTaGCTTCTTTTTCTTGGGCTA +
Preference number: 5 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQMKPGC*LLFLGL
Trigger: TAGCCCAAGAAAAAGAAGCAAACAGCCTGGCTTCAT...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CAA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGAGATTCGTGAGGGATTaGCTTCGAACACACTGGAAA +
Preference number: 5 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLRFVRD*LRTHWK
Trigger: TTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCT...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGGAGAGGTCCTTCTACTaGCATTGTGAGTTTCATTCC +
Preference number: 5 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLERSFY*HCEFHS
Trigger: GGAATGAAACTCACAATGCAAGTAGAAGGACCTCTC...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp ATGCAGATGCAAACTCAAGATTCTAAACTTCAGATTCGGGTTAATCTTGGCTTGACTGGGTACTGCATATaGTGCAGTAAATCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: MQMQTQDSKLQIRVNLGLTGYCI*CSKSGL
Trigger: CAAGCCAGATTTACTGCACAATATGCAGTACCCAGT...CAAGCCAAGATTAACCCGAATCTGAAGTTTAGAATCTTGAGTTTGCATCTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAAGGAGCTATAAAGAATTaGGGAATATTCCTCCCCCAT +
Preference number: 5 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQGAIKN*GIFLPH
Trigger: ATGGGGGAGGAATATTCCCAAATTCTTTATAGCTCC...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CAA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCGGAGCTATAAAGAATTaGGGAATATTCCTCCCCCAT +
Preference number: 5 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSGAIKN*GIFLPH
Trigger: ATGGGGGAGGAATATTCCCAAATTCTTTATAGCTCC...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp CACCTTTTCAGTTTGGTCCCTTTGCTACTAAGCAATTTGCCTGGTATAAAACAACTGGATGAAGGGGCGTaGTACATAATTATAGATGAC +
Preference number: 5 (lower is better)
Translates to: HLFSLVPLLLSNLPGIKQLDEGA*YIIIDD
Trigger: GTCATCTATAATTATGTACAACGCCCCTTCATCCAG...TTGTTTTATACCAGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAAAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CAA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGAGATTCGTGAGGGATTaGCTTCGAACACACTGGAAA +
Preference number: 5 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLRFVRD*LRTHWK
Trigger: TTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCT...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCCCGTTTATTCCCACTTaGGAAGCAAGAACCTTTGAT +
Preference number: 5 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSPFIPT*EARTFD
Trigger: ATCAAAGGTTCTTGCTTCCAAAGTGGGAATAAACGG...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS-3UTR CAA 90 bp ATTTGGAGAGGTCCTTCTACTTGCATTGTGAGTTTCATTCCAAATGAATCATCCTTCAGTTTGGTCCCTTaGCTACTAAGCAATTTGCCT +
Preference number: 5 (lower is better)
Translates to: IWRGPSTCIVSFIPNESSFSLVP*LLSNLP
Trigger: AGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAA...GGATGATTCATTTGGAATGAAACTCACAATGCAAGTAGAAGGACCTCTCCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp TTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGGCTTTGGGCAACTTATTaGCAAACACATCTAACCTTC +
Preference number: 5 (lower is better)
Translates to: LHKDSMNSTRPKFFKLPGLWATY*QTHLTF
Trigger: GAAGGTTAGATGTGTTTGCAAATAAGTTGCCCAAAG...CCCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp GTTACACAAAGACTCAATGAACAGCACCAGACCCAAATTTTTCAAGTTACCAGGTTGCTACTAAGCAATTaGCCTGGTATAAAACAAGAC +
Preference number: 5 (lower is better)
Translates to: VTQRLNEQHQTQIFQVTRLLLSN*PGIKQD
Trigger: GTCTTGTTTTATACCAGGCAAATTGCTTAGTAGCAA...CCTGGTAACTTGAAAAATTTGGGTCTGGTGCTGTTCATTGAGTCTTTGTGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS-3UTR CAA 90 bp TTCCAGTCAGCTTCTACCACAAACTGGGAGATAATTCCAAAATACTTATATCTGTTCAGTTTGGTCCCTTaGCTACTAAGCAATTTGCCT +
Preference number: 5 (lower is better)
Translates to: FQSASTTNWEIIPKYLYLFSLVP*LLSNLP
Trigger: AGGCAAATTGCTTAGTAGCAAAGGGACCAAACTGAA...CAGATATAAGTATTTTGGAATTATCTCCCAGTTTGTGGTAGAAGCTGACTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp CCCTGGAAAGAGCTTTCAACATCTACCTGGCTTTTATCTTTGGATGATTATGACATTTCTGTCCTCATCTaGAAAGCCTTTAAGCCATAT +
Preference number: 5 (lower is better)
Translates to: PWKELSTSTWLLSLDDYDISVLI*KAFKPY
Trigger: ATATGGCTTAAAGGCTTTCAAGATGAGGACAGAAAT...GTCATAATCATCCAAAGATAAAAGCCAGGTAGATGTTGAAAGCTCTTTCCAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS-3UTR CAA 90 bp AGAGCTAATAGATCAAATAAAATGACTGGGCTTAATTTCCATTCAGCTCACCCTCTTAAGAATTTCCTTTaGGACATTCTGAATGAGACC +
Preference number: 5 (lower is better)
Translates to: RANRSNKMTGLNFHSAHPLKNFL*DILNET
Trigger: GGTCTCATTCAGAATGTCCAAAAGGAAATTCTTAAG...AGGGTGAGCTGAATGGAAATTAAGCCCAGTCATTTTATTTGATCTATTAGCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000449081.6
ENST00000536244.5
CDS GCA 72 bp AAGCCCGGAGGTCAAAGCTGCAGTGAGCTGAAATCTTaGCACTACACCTCATCTCGTCGCTCCCCGCCGCGC +
Preference number: 6 (lower is better)
Translates to: KPGGQSCSELKS*HYTSSRRSPPR
Trigger: GCGCGGCGGGGAGCGACGAGATGAGGTGTAGTGGCAAGATTTCAGCTCACTGCAGCTTTGACCTCCGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460983.1
CDS TCA 72 bp TGCGGGTGGCAGGGAAGGAAGACGCGGAAACAGGGCTaGAAAGACCGAGCAAAATGCGCTCGGCTCCAGAGT +
Preference number: 6 (lower is better)
Translates to: CGWQGRKTRKQG*KDRAKCARLQS
Trigger: ACTCTGGAGCCGAGCGCATTTTGCTCGGTCTTTTCAGCCCTGTTTCCGCGTCTTCCTTCCCTGCCACCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443316.2
CDS CCA 72 bp CCCAGCTCTTTTGCACTCAGAGCCACGGATGAAAGCTaGCAATTTGCGGGTGGCAGGGAAGGAAGACGCGGA +
Preference number: 6 (lower is better)
Translates to: PSSFALRATDES*QFAGGREGRRG
Trigger: TCCGCGTCTTCCTTCCCTGCCACCCGCAAATTGCCAGCTTTCATCCGTGGCTCTGAGTGCAAAAGAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443316.2
CDS GCA 72 bp ACCGTAAATGGGTGTCGCCTTTCCTCCAGTCCACTCTaGACCCAACCTCAGCGGGCGCACTTTTCTGAGTTG +
Preference number: 6 (lower is better)
Translates to: TVNGCRLSSSPL*TQPQRAHFSEL
Trigger: CAACTCAGAAAAGTGCGCCCGCTGAGGTTGGGTGCAGAGTGGACTGGAGGAAAGGCGACACCCATTTACGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536244.5
CDS TCA 72 bp GACTGCTTAAGCCCGGAGGTCAAAGCTGCAGTGAGCTaGAATCTTGCCACTACACCTCATCTCGTCGCTCCC +
Preference number: 6 (lower is better)
Translates to: DCLSPEVKAAVS*NLATTPHLVAP
Trigger: GGGAGCGACGAGATGAGGTGTAGTGGCAAGATTTCAGCTCACTGCAGCTTTGACCTCCGGGCTTAAGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460983.1
CDS CCA 72 bp TCATCTGTAGTCCCAACTACTTGGGCAAGGCTGACGTaGGAGGACTGCTTAAGCCCGGAGGTCAAAGCTGCA +
Preference number: 6 (lower is better)
Translates to: SSVVPTTWARLT*EDCLSPEVKAA
Trigger: TGCAGCTTTGACCTCCGGGCTTAAGCAGTCCTCCCACGTCAGCCTTGCCCAAGTAGTTGGGACTACAGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460983.1
CDS GCA 72 bp GACGTGGGAGGACTGCTTAAGCCCGGAGGTCAAAGCTaGAGTGAGCTGAAATCTTGCCACTACACCTCATCT +
Preference number: 6 (lower is better)
Translates to: DVGGLLKPGGQS*SELKSCHYTSS
Trigger: AGATGAGGTGTAGTGGCAAGATTTCAGCTCACTGCAGCTTTGACCTCCGGGCTTAAGCAGTCCTCCCACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460983.1
CDS CCA 72 bp CAACAGAGTGAGACTTCATCTGTAGTCCCAACTACTTaGGCAAGGCTGACGTGGGAGGACTGCTTAAGCCCG +
Preference number: 6 (lower is better)
Translates to: QQSETSSVVPTT*ARLTWEDCLSP
Trigger: CGGGCTTAAGCAGTCCTCCCACGTCAGCCTTGCCCAAGTAGTTGGGACTACAGATGAAGTCTCACTCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460983.1
CDS GCA 72 bp AGCTGGCCTCCTGCCGCAATAACCTGTCACTGTCACTaGCACGGTGAACATTCATCCTTAGATTCTGAGTCC +
Preference number: 6 (lower is better)
Translates to: SWPPAAITCHCH*HGEHSSLDSES
Trigger: GGACTCAGAATCTAAGGATGAATGTTCACCGTGGCAGTGACAGTGACAGGTTATTGCGGCAGGAGGCCAGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000460983.1
ENST00000481911.5
ENST00000483557.5
ENST00000498267.5
ENST00000536244.5
CDS TCA 72 bp TCCACTCTGCACCCAACCTCAGCGGGCGCACTTTTCTaGGTTGCGCATACCCTCTCAATTATTAAAGGTTGC +
Preference number: 6 (lower is better)
Translates to: STLHPTSAGALF*VAHTLSIIKGC
Trigger: GCAACCTTTAATAATTGAGAGGGTATGCGCAACTCAGAAAAGTGCGCCCGCTGAGGTTGGGTGCAGAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536244.5
CDS CAA 90 bp TCCAGTCCACTCTGCACCCAACCTCAGCGGGCGCACTTTTCTGAGTaGCGCATACCCTCTCAATTATTAAAGGTTGCAGACGGAAAAGTT +
Preference number: 6 (lower is better)
Translates to: SSPLCTQPQRAHFSE*RIPSQLLKVADGKV
Trigger: AACTTTTCCGTCTGCAACCTTTAATAATTGAGAGGGTATGCGCAACTCAGAAAAGTGCGCCCGCTGAGGTTGGGTGCAGAGTGGACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536244.5
CDS CAA 72 bp TGTGCCATCTACAAGAAGCGTCACTTTCTCTGGTGCTaGGGAATGGGAATTACTGCCAAAGCCCACACTACT +
Preference number: 6 (lower is better)
Translates to: CAIYKKRHFLWC*GMGITAKAHTT
Trigger: AGTAGTGTGGGCTTTGGCAGTAATTCCCATTCCCAAGCACCAGAGAAAGTGACGCTTCTTGTAGATGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS TCA 72 bp TGCCACGGTGAACATTCATCCTTAGATTCTGAGTCCTaGACTGTCCGTTTGATCAGAGAGAAATCTCGTCGC +
Preference number: 6 (lower is better)
Translates to: CHGEHSSLDSES*TVRLIREKSRR
Trigger: GCGACGAGATTTCTCTCTGATCAAACGGACAGTTCAGGACTCAGAATCTAAGGATGAATGTTCACCGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000481911.5
ENST00000536244.5
CDS TCA 72 bp CCTGGTCCAAACATCCTTCCCAGCATGGTATCCGGATaGGCAGTGAAAATCTGTGGATTCACAACAAAACGT +
Preference number: 6 (lower is better)
Translates to: PGPNILPSMVSG*AVKICGFTTKR
Trigger: ACGTTTTGTTGTGAATCCACAGATTTTCACTGCTCATCCGGATACCATGCTGGGAAGGATGTTTGGACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS GCA 72 bp GCGTCACTTTCTCTGGTGCTTGGGAATGGGAATTACTaGCAAAGCCCACACTACTGTTTCCAAATCTTTCTG +
Preference number: 6 (lower is better)
Translates to: ASLSLVLGNGNY*QSPHYCFQIFL
Trigger: CAGAAAGATTTGGAAACAGTAGTGTGGGCTTTGGCAGTAATTCCCATTCCCAAGCACCAGAGAAAGTGACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS GCA 72 bp CATGGAGTAAAGCACCAGCACTGTGCGAAATACAGTTaGACTGATGCCTTCAGCAATCTCATACTCTCCCTT +
Preference number: 6 (lower is better)
Translates to: HGVKHQHCAKYS*TDAFSNLILSL
Trigger: AAGGGAGAGTATGAGATTGCTGAAGGCATCAGTGCAACTGTATTTCGCACAGTGCTGGTGCTTTACTCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481911.5
CDS CCA 72 bp GGACCAGATGAAGCCAGGCTGTTTGCTTCTTTTTCTTaGGCTACAGCTAAAGTATCATCCACTAAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: GPDEARLFASFS*ATAKVSSTKQL
Trigger: CAGCTGCTTAGTGGATGATACTTTAGCTGTAGCCCAAGAAAAAGAAGCAAACAGCCTGGCTTCATCTGGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000449081.6
ENST00000460983.1
ENST00000481911.5
ENST00000483557.5
ENST00000498267.5
ENST00000536244.5
CDS CCA 72 bp TCTACAAGAAGCGTCACTTTCTCTGGTGCTTGGGAATaGGAATTACTGCCAAAGCCCACACTACTGTTTCCA +
Preference number: 6 (lower is better)
Translates to: STRSVTFSGAWE*ELLPKPTLLFP
Trigger: TGGAAACAGTAGTGTGGGCTTTGGCAGTAATTCCCATTCCCAAGCACCAGAGAAAGTGACGCTTCTTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS CAA 90 bp AACAAAACGTGTGCCATCTACAAGAAGCGTCACTTTCTCTGGTGCTaGGGAATGGGAATTACTGCCAAAGCCCACACTACTGTTTCCAAA +
Preference number: 6 (lower is better)
Translates to: NKTCAIYKKRHFLWC*GMGITAKAHTTVSK
Trigger: TTTGGAAACAGTAGTGTGGGCTTTGGCAGTAATTCCCATTCCCAAGCACCAGAGAAAGTGACGCTTCTTGTAGATGGCACACGTTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373731.7
CDS TCA 72 bp TGCCACGGTGAACATTCATCCTTAGATTCTGAGTCCTaGACTGTCCGTTTGATCAGAGAGAAATCCTGGAAC +
Preference number: 6 (lower is better)
Translates to: CHGEHSSLDSES*TVRLIREKSWN
Trigger: GTTCCAGGATTTCTCTCTGATCAAACGGACAGTTCAGGACTCAGAATCTAAGGATGAATGTTCACCGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483557.5
CDS CAA 72 bp CAATTAATTGCCAGAAAAACCGCGTCTGCAAATGTTTaGCCAGTCAACACTCCAGGTTCTCGCCATTCCTCT +
Preference number: 6 (lower is better)
Translates to: QLIARKTASANV*PVNTPGSRHSS
Trigger: AGAGGAATGGCGAGAACCTGGAGTGTTGACTGGCAAAACATTTGCAGACGCGGTTTTTCTGGCAATTAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443316.2
ENST00000498267.5
CDS CAA 72 bp AAAGAAAATTGCTGGTTAAGGCTTTCCCCAGCTCTTTaGCACTCAGAGCCACGGATGAAAGCTGGCAATTTG +
Preference number: 6 (lower is better)
Translates to: KENCWLRLSPAL*HSEPRMKAGNL
Trigger: CAAATTGCCAGCTTTCATCCGTGGCTCTGAGTGCAAAAGAGCTGGGGAAAGCCTTAACCAGCAATTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443316.2
CDS TCA 72 bp TGCCACGGTGAACATTCATCCTTAGATTCTGAGTCCTaGACTGTCCGTTTGATCAGAGAGAAATCCTGTAGT +
Preference number: 6 (lower is better)
Translates to: CHGEHSSLDSES*TVRLIREKSCS
Trigger: ACTACAGGATTTCTCTCTGATCAAACGGACAGTTCAGGACTCAGAATCTAAGGATGAATGTTCACCGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460983.1
CDS GCA 72 bp TTAATGGAGCCAATTAATTGCCAGAAAAACCGCGTCTaGAAATGTTTTGCCAGTCAACACTCCAGGTTCTCG +
Preference number: 6 (lower is better)
Translates to: LMEPINCQKNRV*KCFASQHSRFS
Trigger: CGAGAACCTGGAGTGTTGACTGGCAAAACATTTGCAGACGCGGTTTTTCTGGCAATTAATTGGCTCCATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443316.2
ENST00000498267.5
CDS GCA 72 bp GGTTTTGTAATAATCCAGCACTGTGCGAAATACAGTTaGACTGATGCCTTCAGCAATCTCATACTCTCCCTT +
Preference number: 6 (lower is better)
Translates to: GFVIIQHCAKYS*TDAFSNLILSL
Trigger: AAGGGAGAGTATGAGATTGCTGAAGGCATCAGTGCAACTGTATTTCGCACAGTGCTGGATTATTACAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265344.8
ENST00000373731.7
ENST00000536244.5
CDS CCA 72 bp ACTGCCAAAGCCCACACTACTGTTTCCAAATCTTTCTaGAGCAATAAAAGGTTCATGGTTCCGTTTATTCCC +
Preference number: 6 (lower is better)
Translates to: TAKAHTTVSKSF*SNKRFMVPFIP
Trigger: GGGAATAAACGGAACCATGAACCTTTTATTGCTCCAGAAAGATTTGGAAACAGTAGTGTGGGCTTTGGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000483557.5
CDS CAA 72 bp AGCAATAAAAGGTTCATGGTTCCGTTTATTCCCACTTaGGAAGCAAGAACCTTTGATGTCTTCAGCAAGGGG +
Preference number: 6 (lower is better)
Translates to: SNKRFMVPFIPT*EARTFDVFSKG
Trigger: CCCCTTGCTGAAGACATCAAAGGTTCTTGCTTCCAAAGTGGGAATAAACGGAACCATGAACCTTTTATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373731.7
ENST00000483557.5
ENST00000498267.5
CDS CAA 90 bp TCTTTCTGGAGCAATAAAAGGTTCATGGTTCCGTTTATTCCCACTTaGGAAGCAAGAACCTTTGATGTCTTCAGCAAGGGGCATTATGTG +
Preference number: 6 (lower is better)
Translates to: SFWSNKRFMVPFIPT*EARTFDVFSKGHYV
Trigger: CACATAATGCCCCTTGCTGAAGACATCAAAGGTTCTTGCTTCCAAAGTGGGAATAAACGGAACCATGAACCTTTTATTGCTCCAGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000483557.5
CDS CCA 72 bp CTGTTTCCAAATCTTTCTGGAGCAATAAAAGGTTCATaGTTCCGTTTATTCCCACTTTGGAAGCAAGAACCT +
Preference number: 6 (lower is better)
Translates to: LFPNLSGAIKGS*FRLFPLWKQEP
Trigger: AGGTTCTTGCTTCCAAAGTGGGAATAAACGGAACCATGAACCTTTTATTGCTCCAGAAAGATTTGGAAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373731.7
ENST00000483557.5