RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCTD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000180901

Ensembl transcript IDs: ENST00000322444.7, ENST00000375286.7, ENST00000579230.1, ENST00000579242.5, ENST00000581589.5, ENST00000582840.5, ENST00000584570.5, ENST00000584767.5

Found 388 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGGGAAAACAAGCTCTCCAGAGGGTCCCGGCTGCTGGAGAAAGGTaGGGCAAAGCTGCATGTGGTGGCAGCCGGGAGCCCCAAATCCAG +
Preference number: 1 (lower is better)
Translates to: EGKQALQRVPAAGER*GKAACGGSREPQIQ
Trigger: CTGGATTTGGGGCTCCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTTCTCCAGCAGCCGGGACCCTCTGGAGAGCTTGTTTTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 90 bp CCTCTTCTTGGAGGGAAAACAAGCTCTCCAGAGGGTCCCGGCTGCTaGAGAAAGGTGAGGCAAAGCTGCATGTGGTGGCAGCCGGGAGCC +
Preference number: 1 (lower is better)
Translates to: PLLGGKTSSPEGPGC*RKVRQSCMWWQPGA
Trigger: GGCTCCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTTCTCCAGCAGCCGGGACCCTCTGGAGAGCTTGTTTTCCCTCCAAGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 90 bp AGCGAGACCCACATGCTCGGAGAGAAAGTGTGGACACAAACTCTGTaGATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCC +
Preference number: 1 (lower is better)
Translates to: SETHMLGEKVWTQTL*MQPERGCCRIRILA
Trigger: GGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCATCCACAGAGTTTGTGTCCACACTTTCTCTCCGAGCATGTGGGTCTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 90 bp AGACCCACATGCTCGGAGAGAAAGTGTGGACACAAACTCTGTGGATaGAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCA +
Preference number: 1 (lower is better)
Translates to: RPTCSERKCGHKLCG*SPKEGAAASGSSPA
Trigger: TGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCATCCACAGAGTTTGTGTCCACACTTTCTCTCCGAGCATGTGGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 90 bp AAACCTCTTCTTGGAGGGAAAACAAGCTCTCCAGAGGGTCCCGGCTaGTGGAGAAAGGTGAGGCAAAGCTGCATGTGGTGGCAGCCGGGA +
Preference number: 1 (lower is better)
Translates to: KPLLGGKTSSPEGPG*WRKVRQSCMWWQPG
Trigger: TCCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTTCTCCAGCAGCCGGGACCCTCTGGAGAGCTTGTTTTCCCTCCAAGAAGAGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 90 bp TCCCCTGGCTCTACCGCATTCCATGACTGCTCAGCGAGACCCACATaGTCGGAGAGAAAGTGTGGACACAAACTCTGTGGATGCAGCCCG +
Preference number: 1 (lower is better)
Translates to: SPGSTAFHDCSARPT*SERKCGHKLCGCSP
Trigger: CGGGCTGCATCCACAGAGTTTGTGTCCACACTTTCTCTCCGAGCATGTGGGTCTCGCTGAGCAGTCATGGAATGCGGTAGAGCCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 90 bp TGTGGAGCACACAGGACATCACTTCTGAAGGTGCCCAGGAGCACCTaGCTCGAGGAGGCTTTCATAGAAGGAGAAGTCCCCAGAGCCCCT +
Preference number: 1 (lower is better)
Translates to: CGAHRTSLLKVPRST*LEEAFIEGEVPRAP
Trigger: AGGGGCTCTGGGGACTTCTCCTTCTATGAAAGCCTCCTCGAGCCAGGTGCTCCTGGGCACCTTCAGAAGTGATGTCCTGTGTGCTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR TCA 90 bp GGTGTTCCGAAGCAGCTGCTAACGTCCATTGTGGCACACATAGGGTaGAACCATGGCACGGCACGGGAACAATCCTCTTGGCTCCAGCGT +
Preference number: 1 (lower is better)
Translates to: GVPKQLLTSIVAHIG*NHGTAREQSSWLQR
Trigger: ACGCTGGAGCCAAGAGGATTGTTCCCGTGCCGTGCCATGGTTTCACCCTATGTGTGCCACAATGGACGTTAGCAGCTGCTTCGGAACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR TCA 90 bp CAAAGCTGCATGTGGTGGCAGCCGGGAGCCCCAAATCCAGAGCAATaGTCACCAACCTCCAACCACAACAAAGGACACCCCATCCTCCCT +
Preference number: 1 (lower is better)
Translates to: QSCMWWQPGAPNPEQ*SPTSNHNKGHPILP
Trigger: AGGGAGGATGGGGTGTCCTTTGTTGTGGTTGGAGGTTGGTGATCATTGCTCTGGATTTGGGGCTCCCGGCTGCCACCACATGCAGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR TCA 90 bp AAGTTATTCGGGGCAGACAGGGTCCCCTGGCTCTACCGCATTCCATaGCTGCTCAGCGAGACCCACATGCTCGGAGAGAAAGTGTGGACA +
Preference number: 1 (lower is better)
Translates to: KLFGADRVPWLYRIP*LLSETHMLGEKVWT
Trigger: TGTCCACACTTTCTCTCCGAGCATGTGGGTCTCGCTGAGCAGTCATGGAATGCGGTAGAGCCAGGGGACCCTGTCTGCCCCGAATAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 90 bp GAGAAAGTGTGGACACAAACTCTGTGGATGCAGCCCGAAAGAGGGTaGTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAAAGA +
Preference number: 1 (lower is better)
Translates to: EKVWTQTLWMQPERG*CRIRILASMALQKR
Trigger: TCTTTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCATCCACAGAGTTTGTGTCCACACTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 90 bp TATTCGGGGCAGACAGGGTCCCCTGGCTCTACCGCATTCCATGACTaGTCAGCGAGACCCACATGCTCGGAGAGAAAGTGTGGACACAAA +
Preference number: 1 (lower is better)
Translates to: YSGQTGSPGSTAFHD*SARPTCSERKCGHK
Trigger: TTTGTGTCCACACTTTCTCTCCGAGCATGTGGGTCTCGCTGAGCAGTCATGGAATGCGGTAGAGCCAGGGGACCCTGTCTGCCCCGAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 90 bp CAGAACACTTCTTCACAGGGGGCCAGGATCAGCTGTGCTTTGCAGTaGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGG +
Preference number: 1 (lower is better)
Translates to: QNTSSQGARISCALQ*LGHWTGVRFHFTEG
Trigger: CCCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTGCAAAGCACAGCTGATCCTGGCCCCCTGTGAAGAAGTGTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR CCA 90 bp CTAGGCCTTCCGCCCTCATCCCCCAGATCCCCGAAAGGCTCCGACTaGGAACCCAGCCCAGCTGCTGTTGTAAAGATCTGTTCTAATACT +
Preference number: 1 (lower is better)
Translates to: LGLPPSSPRSPKGSD*EPSPAAVVKICSNT
Trigger: AGTATTAGAACAGATCTTTACAACAGCAGCTGGGCTGGGTTCCCAGTCGGAGCCTTTCGGGGATCTGGGGGATGAGGGCGGAAGGCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 90 bp AGGGAAGGAAGACAGGGTCAATGGGGAGTAAGAAGAGGCTGCAGGTaGAGTTCCTACAGCTCCCACTTGTCTGACTCAGTGCAGGATGCC +
Preference number: 1 (lower is better)
Translates to: REGRQGQWGVRRGCR*SSYSSHLSDSVQDA
Trigger: GGCATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGAACTGCACCTGCAGCCTCTTCTTACTCCCCATTGACCCTGTCTTCCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 90 bp AAAGTGTGGACACAAACTCTGTGGATGCAGCCCGAAAGAGGGTGCTaGCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAAAGAAAG +
Preference number: 1 (lower is better)
Translates to: KVWTQTLWMQPERGC*RIRILASMALQKRK
Trigger: CTTTCTTTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCATCCACAGAGTTTGTGTCCACACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 90 bp TCCAGAAACTACTACCCAGACGTACCTTGGCAAGCAGGTGAGCTGTaGAGCACACAGGACATCACTTCTGAAGGTGCCCAGGAGCACCTG +
Preference number: 1 (lower is better)
Translates to: SRNYYPDVPWQAGEL*STQDITSEGAQEHL
Trigger: CAGGTGCTCCTGGGCACCTTCAGAAGTGATGTCCTGTGTGCTCCACAGCTCACCTGCTTGCCAAGGTACGTCTGGGTAGTAGTTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR TCA 90 bp AGTAAGAAGAGGCTGCAGGTGCAGTTCCTACAGCTCCCACTTGTCTaGCTCAGTGCAGGATGCCGCCTGTCTCAAACCTCTTCTTGGAGG +
Preference number: 1 (lower is better)
Translates to: SKKRLQVQFLQLPLV*LSAGCRLSQTSSWR
Trigger: CCTCCAAGAAGAGGTTTGAGACAGGCGGCATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGAACTGCACCTGCAGCCTCTTCTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 90 bp GAGGCTGCAGGTGCAGTTCCTACAGCTCCCACTTGTCTGACTCAGTaGAGGATGCCGCCTGTCTCAAACCTCTTCTTGGAGGGAAAACAA +
Preference number: 1 (lower is better)
Translates to: EAAGAVPTAPTCLTQ*RMPPVSNLFLEGKQ
Trigger: TTGTTTTCCCTCCAAGAAGAGGTTTGAGACAGGCGGCATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGAACTGCACCTGCAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 90 bp AAAGCCAGGGAAGGAAGACAGGGTCAATGGGGAGTAAGAAGAGGCTaGAGGTGCAGTTCCTACAGCTCCCACTTGTCTGACTCAGTGCAG +
Preference number: 1 (lower is better)
Translates to: KAREGRQGQWGVRRG*RCSSYSSHLSDSVQ
Trigger: CTGCACTGAGTCAGACAAGTGGGAGCTGTAGGAACTGCACCTGCAGCCTCTTCTTACTCCCCATTGACCCTGTCTTCCTTCCCTGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 90 bp GAAGCAGCTGCTAACGTCCATTGTGGCACACATAGGGTGAAACCATaGCACGGCACGGGAACAATCCTCTTGGCTCCAGCGTCCTTAAAG +
Preference number: 1 (lower is better)
Translates to: EAAANVHCGTHRVKP*HGTGTILLAPASLK
Trigger: CTTTAAGGACGCTGGAGCCAAGAGGATTGTTCCCGTGCCGTGCCATGGTTTCACCCTATGTGTGCCACAATGGACGTTAGCAGCTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 90 bp ATTCGACAAACTGCAGCTAGAACCCTTTGCATCTGCTGCACGTCTTaGAGGGTGCATAGGAGGGACGGTGTTCCGAAGCAGCTGCTAACG +
Preference number: 1 (lower is better)
Translates to: IRQTAARTLCICCTS*RVHRRDGVPKQLLT
Trigger: CGTTAGCAGCTGCTTCGGAACACCGTCCCTCCTATGCACCCTCCAAGACGTGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 90 bp ACCAAGCTGCTTTTCCTCTGTCAGTCTGATGTTACTCATTGGACCTaGCCAAGGAGCGCCTCTTCCAAAGTCCTCCATCCTACCCGGCTC +
Preference number: 1 (lower is better)
Translates to: TKLLFLCQSDVTHWT*PRSASSKVLHPTRL
Trigger: GAGCCGGGTAGGATGGAGGACTTTGGAAGAGGCGCTCCTTGGCCAGGTCCAATGAGTAACATCAGACTGACAGAGGAAAAGCAGCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 90 bp AAAACCTCAATTCGACAAACTGCAGCTAGAACCCTTTGCATCTGCTaGACGTCTTGGAGGGTGCATAGGAGGGACGGTGTTCCGAAGCAG +
Preference number: 1 (lower is better)
Translates to: KTSIRQTAARTLCIC*TSWRVHRRDGVPKQ
Trigger: CTGCTTCGGAACACCGTCCCTCCTATGCACCCTCCAAGACGTGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAATTGAGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 90 bp CCTAAAACCTCAATTCGACAAACTGCAGCTAGAACCCTTTGCATCTaGTGCACGTCTTGGAGGGTGCATAGGAGGGACGGTGTTCCGAAG +
Preference number: 1 (lower is better)
Translates to: PKTSIRQTAARTLCI*CTSWRVHRRDGVPK
Trigger: CTTCGGAACACCGTCCCTCCTATGCACCCTCCAAGACGTGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAATTGAGGTTTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 90 bp GGTATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTaGGGAGGGAGTTCCTTTAGTTTTGACCAGAACACTTCTTCACAG +
Preference number: 1 (lower is better)
Translates to: GILQPEVALSSESCR*GGSSFSFDQNTSSQ
Trigger: CTGTGAAGAAGTGTTCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR CCA 90 bp ACCAACCTCCAACCACAACAAAGGACACCCCATCCTCCCTTTCCTTaGAGGCTCTATTCATGGGAATGCGGGGTACTCTGGCAACTCTAT +
Preference number: 1 (lower is better)
Translates to: TNLQPQQRTPHPPFP*RLYSWECGVLWQLY
Trigger: ATAGAGTTGCCAGAGTACCCCGCATTCCCATGAATAGAGCCTCCAAGGAAAGGGAGGATGGGGTGTCCTTTGTTGTGGTTGGAGGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 90 bp GCTTTACCTAAAACCTCAATTCGACAAACTGCAGCTAGAACCCTTTaGATCTGCTGCACGTCTTGGAGGGTGCATAGGAGGGACGGTGTT +
Preference number: 1 (lower is better)
Translates to: ALPKTSIRQTAARTL*ICCTSWRVHRRDGV
Trigger: AACACCGTCCCTCCTATGCACCCTCCAAGACGTGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAATTGAGGTTTTAGGTAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR TCA 90 bp CCAAGCCATCAAAGGGTCCATAAGTGCCTTCATCTTTGGTCCAGTTaGAAAAGCCAGGGAAGGAAGACAGGGTCAATGGGGAGTAAGAAG +
Preference number: 1 (lower is better)
Translates to: PSHQRVHKCLHLWSS*KSQGRKTGSMGSKK
Trigger: CTTCTTACTCCCCATTGACCCTGTCTTCCTTCCCTGGCTTTTTCAACTGGACCAAAGATGAAGGCACTTATGGACCCTTTGATGGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 90 bp CCTCCCTTTCCTTGGAGGCTCTATTCATGGGAATGCGGGGTACTCTaGCAACTCTATGCTTTACCTAAAACCTCAATTCGACAAACTGCA +
Preference number: 1 (lower is better)
Translates to: PPFPWRLYSWECGVL*QLYALPKTSIRQTA
Trigger: TGCAGTTTGTCGAATTGAGGTTTTAGGTAAAGCATAGAGTTGCCAGAGTACCCCGCATTCCCATGAATAGAGCCTCCAAGGAAAGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR TCA 90 bp CGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAAAGCAGCTCCCACTTGTCTaGCTCAGTGCAGGATGCCGC +
Preference number: 2 (lower is better)
Translates to: RKRVLPHPDPRQHGTPEKQLPLV*LSAGCR
Trigger: GCGGCATCCTGCACTGAGTCAGACAAGTGGGAGCTG...CTTTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp GTTATTCGGGGCAGACAGGGTCCCCTGGCTCTACCGCATTCCATGACTGCTCAGCAGCCCGAAAGAGGGTaGTGCCGCATCCGGATCCTC +
Preference number: 2 (lower is better)
Translates to: VIRGRQGPLALPHSMTAQQPERG*CRIRIL
Trigger: GAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTG...CTGAGCAGTCATGGAATGCGGTAGAGCCAGGGGACCCTGTCTGCCCCGAATAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp ATCTGCTGCACGTCTTGGAGGGTGCATAGGAGGGACGGTGTTCCGAAGCAGCTGAGGCAAAGCTGCATGTaGTGGCAGCCGGGAGCCCCA +
Preference number: 2 (lower is better)
Translates to: ICCTSWRVHRRDGVPKQLRQSCM*WQPGAP
Trigger: TGGGGCTCCCGGCTGCCACCACATGCAGCTTTGCCT...CAGCTGCTTCGGAACACCGTCCCTCCTATGCACCCTCCAAGACGTGCAGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp GGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTAGGCCTTCCGCCCAGGCAAAGCTGCATGTaGTGGCAGCCGGGAGCCCCA +
Preference number: 2 (lower is better)
Translates to: GSSVLKVQAISKELGLPPRQSCM*WQPGAP
Trigger: TGGGGCTCCCGGCTGCCACCACATGCAGCTTTGCCT...GGGCGGAAGGCCTAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp CTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCAGCTGTGCTTTGCAGTaGCTCGGTCACTGGACAGGA +
Preference number: 2 (lower is better)
Translates to: LQPEVALSSESCRWGGSSSCALQ*LGHWTG
Trigger: TCCTGTCCAGTGACCGAGCCACTGCAAAGCACAGCT...GGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR-3UTR GCA 90 bp TTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTAGGGGCTCTGCTGACTaGTCTCCTGAAGGTCTGGAG +
Preference number: 2 (lower is better)
Translates to: FCSQKSHCLRSPAGGEGVRGSAD*SPEGLE
Trigger: CTCCAGACCTTCAGGAGAGCAGTCAGCAGAGCCCCT...AACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR-3UTR GCA 90 bp CTGTGGAGCACACAGGACATCACTTCTGAAGGTGCCCAGGAGCACCTGGCTCGAGCACGTCTTGGAGGGTaGATAGGAGGGACGGTGTTC +
Preference number: 2 (lower is better)
Translates to: LWSTQDITSEGAQEHLARARLGG*IGGTVF
Trigger: GAACACCGTCCCTCCTATGCACCCTCCAAGACGTGC...TCGAGCCAGGTGCTCCTGGGCACCTTCAGAAGTGATGTCCTGTGTGCTCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp ATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCTCTATTCATGGGAATaGGGGGTACTCTGGCAACTC +
Preference number: 2 (lower is better)
Translates to: MQPERGCCRIRILASMALLYSWE*GVLWQL
Trigger: GAGTTGCCAGAGTACCCCGCATTCCCATGAATAGAG...GAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR TCA 90 bp GGGTCCCCAGACTGCCTAGCACATACATACATACCACTGGGGACAGTACAGAGGCAGCTCCCACTTGTCTaGCTCAGTGCAGGATGCCGC +
Preference number: 2 (lower is better)
Translates to: GSPDCLAHTYIPLGTVQRQLPLV*LSAGCR
Trigger: GCGGCATCCTGCACTGAGTCAGACAAGTGGGAGCTG...CCTCTGTACTGTCCCCAGTGGTATGTATGTATGTGCTAGGCAGTCTGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp ACACAAACTCTGTGGATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCAGAAGAGGCTGCAGGTaGAGTTCCTACAGCTCCCAC +
Preference number: 2 (lower is better)
Translates to: TQTLWMQPERGCCRIRILRRGCR*SSYSSH
Trigger: GTGGGAGCTGTAGGAACTGCACCTGCAGCCTCTTCT...GAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCATCCACAGAGTTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp GGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTAGGCCTTCCGCCCTCGGAGTCCTGCAGGTaGGGAGGGAGTTCCTTTAGT +
Preference number: 2 (lower is better)
Translates to: GSSVLKVQAISKELGLPPSESCR*GGSSFS
Trigger: ACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGA...GGGCGGAAGGCCTAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp GGGACAGTACAGAGGGGAGCAGGTCCGCCAAGGTTAGAAACCAAGAGACACAAACCGAAAGGCTCCGACTaGGAACCCAGCCCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: GTVQRGAGPPRLETKRHKPKGSD*EPSPAA
Trigger: AGCAGCTGGGCTGGGTTCCCAGTCGGAGCCTTTCGG...TTTGTGTCTCTTGGTTTCTAACCTTGGCGGACCTGCTCCCCTCTGTACTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp AAAGGTGAGGCAAAGCTGCATGTGGTGGCAGCCGGGAGCCCCAAATCCAGAGCAATCTGCTGCACGTCTTaGAGGGTGCATAGGAGGGAC +
Preference number: 2 (lower is better)
Translates to: KGEAKLHVVAAGSPKSRAICCTS*RVHRRD
Trigger: GTCCCTCCTATGCACCCTCCAAGACGTGCAGCAGAT...TGCTCTGGATTTGGGGCTCCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp GCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGAGGGGCTCTGCTGACTaGTCTCCTGAAGGTCTGGAG +
Preference number: 2 (lower is better)
Translates to: ALSSESCRWGGSSFSFDQRGSAD*SPEGLE
Trigger: CTCCAGACCTTCAGGAGAGCAGTCAGCAGAGCCCCT...CTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR-3UTR GCA 90 bp GAAAAGGTATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGGCCAGGATCAGCTGTaGTTTGCAGTGGCTCGGTCA +
Preference number: 2 (lower is better)
Translates to: EKVFCSQKSHCLRSPAGGGQDQL*FAVARS
Trigger: TGACCGAGCCACTGCAAAGCACAGCTGATCCTGGCC...CCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAATACCTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR-3UTR GCA 90 bp AGAGGCTGCAGGTGCAGTTCCTACAGCTCCCACTTGTCTGACTCAGTGCAGGATGCACGTCTTGGAGGGTaGATAGGAGGGACGGTGTTC +
Preference number: 2 (lower is better)
Translates to: RGCRCSSYSSHLSDSVQDARLGG*IGGTVF
Trigger: GAACACCGTCCCTCCTATGCACCCTCCAAGACGTGC...ATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGAACTGCACCTGCAGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp CTGTGGAGCACACAGGACATCACTTCTGAAGGTGCCCAGGAGCACCTGGCTCGATCAGCGAGACCCACATaGTCGGAGAGAAAGTGTGGA +
Preference number: 2 (lower is better)
Translates to: LWSTQDITSEGAQEHLARSARPT*SERKCG
Trigger: TCCACACTTTCTCTCCGAGCATGTGGGTCTCGCTGA...TCGAGCCAGGTGCTCCTGGGCACCTTCAGAAGTGATGTCCTGTGTGCTCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp GCACATACATACATACCACTGGGGACAGTACAGAGGGGAGCAGGTCCGCCAAGGCAGTGGCTCGGTCACTaGACAGGAGTGAGGTTTCAC +
Preference number: 2 (lower is better)
Translates to: AHTYIPLGTVQRGAGPPRQWLGH*TGVRFH
Trigger: GTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTG...CCTTGGCGGACCTGCTCCCCTCTGTACTGTCCCCAGTGGTATGTATGTATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp AAAGGTGAGGCAAAGCTGCATGTGGTGGCAGCCGGGAGCCCCAAATCCAGAGCAGGAAGACAGGGTCAATaGGGAGTAAGAAGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: KGEAKLHVVAAGSPKSRAGRQGQ*GVRRGC
Trigger: GCAGCCTCTTCTTACTCCCCATTGACCCTGTCTTCC...TGCTCTGGATTTGGGGCTCCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp GGGTCCCCAGACTGCCTAGCACATACATACATACCACTGGGGACAGTACAGAGGGGATCAGCTGTGCTTTaGAGTGGCTCGGTCACTGGA +
Preference number: 2 (lower is better)
Translates to: GSPDCLAHTYIPLGTVQRGSAVL*SGSVTG
Trigger: TCCAGTGACCGAGCCACTGCAAAGCACAGCTGATCC...CCTCTGTACTGTCCCCAGTGGTATGTATGTATGTGCTAGGCAGTCTGGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp GCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGGGATCAGCTGTGCTTTaGAGTGGCTCGGTCACTGGA +
Preference number: 2 (lower is better)
Translates to: ALSSESCRWGGSSFSFDQGSAVL*SGSVTG
Trigger: TCCAGTGACCGAGCCACTGCAAAGCACAGCTGATCC...CTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR-3UTR CCA 90 bp TTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTGCTCTCCTGAAGGTCTaGAGTTTTCGGGGTCTTAGT +
Preference number: 2 (lower is better)
Translates to: FCSQKSHCLRSPAGGEGVALLKV*SFRGLS
Trigger: ACTAAGACCCCGAAAACTCCAGACCTTCAGGAGAGC...AACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR-3UTR CCA 90 bp GCACATACATACATACCACTGGGGACAGTACAGAGGGGAGCAGGTCCGCCAAGGTGGAGGCTCTATTCATaGGAATGCGGGGTACTCTGG +
Preference number: 2 (lower is better)
Translates to: AHTYIPLGTVQRGAGPPRWRLYS*ECGVLW
Trigger: CCAGAGTACCCCGCATTCCCATGAATAGAGCCTCCA...CCTTGGCGGACCTGCTCCCCTCTGTACTGTCCCCAGTGGTATGTATGTATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp CGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAAAGCATCCTCCCTTTCCTTaGAGGCTCTATTCATGGGAA +
Preference number: 2 (lower is better)
Translates to: RKRVLPHPDPRQHGTPEKHPPFP*RLYSWE
Trigger: TTCCCATGAATAGAGCCTCCAAGGAAAGGGAGGATG...CTTTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp GTGCAGGATGCCGCCTGTCTCAAACCTCTTCTTGGAGGGAAAACAAGCTCTCCACAAAGCTGCATGTGGTaGCAGCCGGGAGCCCCAAAT +
Preference number: 2 (lower is better)
Translates to: VQDAACLKPLLGGKTSSPQSCMW*QPGAPN
Trigger: ATTTGGGGCTCCCGGCTGCCACCACATGCAGCTTTG...TGGAGAGCTTGTTTTCCCTCCAAGAAGAGGTTTGAGACAGGCGGCATCCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CAA 90 bp CACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTaGACCAGAACACTTCTTCACAGGGGGCCAGGATCAGCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: HCLRSPAGGEGVPLV*TRTLLHRGPGSAVL
Trigger: AAGCACAGCTGATCCTGGCCCCCTGTGAAGAAGTGTTCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR CAA 90 bp TGGGGAGTAAGAAGAGGCTGCAGGTGCAGTTCCTACAGCTCCCACTaGTCTGACTCAGTGCAGGATGCCGCCTGTCTCAAACCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: WGVRRGCRCSSYSSH*SDSVQDAACLKPLL
Trigger: AAGAAGAGGTTTGAGACAGGCGGCATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGAACTGCACCTGCAGCCTCTTCTTACTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR TCA 90 bp ATCAGCCAGACACTCAGAGGGCACAACGCTTTCAAGCAAGAACACCAGCCTGGTGCTGCTGGAGAAAGGTaGGGCAAAGCTGCATGTGGT +
Preference number: 2 (lower is better)
Translates to: ISQTLRGHNAFKQEHQPGAAGER*GKAACG
Trigger: ACCACATGCAGCTTTGCCTCACCTTTCTCCAGCAGC...ACCAGGCTGGTGTTCTTGCTTGAAAGCGTTGTGCCCTCTGAGTGTCTGGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp CGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAAAGCTGCCTGATCCTCATTaGCGTAGTTATAGGAAGATC +
Preference number: 2 (lower is better)
Translates to: RKRVLPHPDPRQHGTPEKLPDPH*RSYRKI
Trigger: GATCTTCCTATAACTACGGCAATGAGGATCAGGCAG...CTTTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375286.7
3UTR-3UTR CCA 90 bp CACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGAAGCTGTGCTTTGCAGTaGCTCGGTCACTGGACAGGA +
Preference number: 2 (lower is better)
Translates to: HCLRSPAGGEGVPLVLTRSCALQ*LGHWTG
Trigger: TCCTGTCCAGTGACCGAGCCACTGCAAAGCACAGCT...TCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR-3UTR CCA 90 bp AGAGGCTGCAGGTGCAGTTCCTACAGCTCCCACTTGTCTGACTCAGTGCAGGATCATAGGGTGAAACCATaGCACGGCACGGGAACAATC +
Preference number: 2 (lower is better)
Translates to: RGCRCSSYSSHLSDSVQDHRVKP*HGTGTI
Trigger: GATTGTTCCCGTGCCGTGCCATGGTTTCACCCTATG...ATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGAACTGCACCTGCAGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp ACACAAACTCTGTGGATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGAATGCGGGGTACTCTaGCAACTCTATGCTTTACCT +
Preference number: 2 (lower is better)
Translates to: TQTLWMQPERGCCRIRILECGVL*QLYALP
Trigger: AGGTAAAGCATAGAGTTGCCAGAGTACCCCGCATTC...GAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCATCCACAGAGTTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CAA 90 bp TTTGACCAGAACACTTCTTCACAGGGGGCCAGGATCAGCTGTGCTTaGCAGTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACA +
Preference number: 2 (lower is better)
Translates to: FDQNTSSQGARISCA*QWLGHWTGVRFHFT
Trigger: TGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTGCAAAGCACAGCTGATCCTGGCCCCCTGTGAAGAAGTGTTCTGGTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR CAA 90 bp CACCAACCTCCAACCACAACAAAGGACACCCCATCCTCCCTTTCCTaGGAGGCTCTATTCATGGGAATGCGGGGTACTCTGGCAACTCTA +
Preference number: 2 (lower is better)
Translates to: HQPPTTTKDTPSSLS*EALFMGMRGTLATL
Trigger: TAGAGTTGCCAGAGTACCCCGCATTCCCATGAATAGAGCCTCCAAGGAAAGGGAGGATGGGGTGTCCTTTGTTGTGGTTGGAGGTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp GTTATTCGGGGCAGACAGGGTCCCCTGGCTCTACCGCATTCCATGACTGCTCAGTCTGAAAAGGTATTCTaGAGCCAGAAGTCGCACTGT +
Preference number: 2 (lower is better)
Translates to: VIRGRQGPLALPHSMTAQSEKVF*SQKSHC
Trigger: ACAGTGCGACTTCTGGCTGCAGAATACCTTTTCAGA...CTGAGCAGTCATGGAATGCGGTAGAGCCAGGGGACCCTGTCTGCCCCGAATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp CTGTGGAGCACACAGGACATCACTTCTGAAGGTGCCCAGGAGCACCTGGCTCGAAACACAGAGGAATTCTaGCTGATCCTCATTGCCGTA +
Preference number: 2 (lower is better)
Translates to: LWSTQDITSEGAQEHLARNTEEF*LILIAV
Trigger: TACGGCAATGAGGATCAGGCAGAATTCCTCTGTGTT...TCGAGCCAGGTGCTCCTGGGCACCTTCAGAAGTGATGTCCTGTGTGCTCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375286.7
3UTR-3UTR CCA 90 bp ACCAACCTCCAACCACAACAAAGGACACCCCATCCTCCCTTTCCTTGGAGGCTCGCTCTCCTGAAGGTCTaGAGTTTTCGGGGTCTTAGT +
Preference number: 2 (lower is better)
Translates to: TNLQPQQRTPHPPFPWRLALLKV*SFRGLS
Trigger: ACTAAGACCCCGAAAACTCCAGACCTTCAGGAGAGC...GAGCCTCCAAGGAAAGGGAGGATGGGGTGTCCTTTGTTGTGGTTGGAGGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp TGCTTTGCAGTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGGCTCTCCTGAAGGTCTaGAGTTTTCGGGGTCTTAGT +
Preference number: 2 (lower is better)
Translates to: CFAVARSLDRSEVSLHRGALLKV*SFRGLS
Trigger: ACTAAGACCCCGAAAACTCCAGACCTTCAGGAGAGC...CCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTGCAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR-3UTR CCA 90 bp GGGAACAATCCTCTTGGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCAGTGGCTCGGTCACTaGACAGGAGTGAGGTTTCAC +
Preference number: 2 (lower is better)
Translates to: GNNPLGSSVLKVQAISKEQWLGH*TGVRFH
Trigger: GTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTG...CTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCCAAGAGGATTGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp TTCTCTGTGCCATCTGCCATACTACTGAAAGTTATTCGGGGCAGACAGGGTCCCATCTGCTGCACGTCTTaGAGGGTGCATAGGAGGGAC +
Preference number: 2 (lower is better)
Translates to: FSVPSAILLKVIRGRQGPICCTS*RVHRRD
Trigger: GTCCCTCCTATGCACCCTCCAAGACGTGCAGCAGAT...GGGACCCTGTCTGCCCCGAATAACTTTCAGTAGTATGGCAGATGGCACAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp ATCAGCCAGACACTCAGAGGGCACAACGCTTTCAAGCAAGAACACCAGCCTGGTTGGAGGCTCTATTCATaGGAATGCGGGGTACTCTGG +
Preference number: 2 (lower is better)
Translates to: ISQTLRGHNAFKQEHQPGWRLYS*ECGVLW
Trigger: CCAGAGTACCCCGCATTCCCATGAATAGAGCCTCCA...ACCAGGCTGGTGTTCTTGCTTGAAAGCGTTGTGCCCTCTGAGTGTCTGGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR TCA 90 bp AACAACGCTCCCAGAAATCTTAAGAACCCAGAGTCCTGGAGCGCTGGAACAATAAGGAGGGAAACTTGGTaGACACCAGCCCTCCGAGAG +
Preference number: 2 (lower is better)
Translates to: NNAPRNLKNPESWSAGTIRRETW*TPALRE
Trigger: CTCTCGGAGGGCTGGTGTTCACCAAGTTTCCCTCCT...TATTGTTCCAGCGCTCCAGGACTCTGGGTTCTTAAGATTTCTGGGAGCGTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp TCCATAAGTGCCTTCATCTTTGGTCCAGTTGAAAAAGCCAGGGAAGGAAGACAGCTGTCTTCGGAGTCCTaGAGGTGGGGAGGGAGTTCC +
Preference number: 2 (lower is better)
Translates to: SISAFIFGPVEKAREGRQLSSES*RWGGSS
Trigger: GGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAG...CTGTCTTCCTTCCCTGGCTTTTTCAACTGGACCAAAGATGAAGGCACTTATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp TTCTCTGTGCCATCTGCCATACTACTGAAAGTTATTCGGGGCAGACAGGGTCCCCATAGGGTGAAACCATaGCACGGCACGGGAACAATC +
Preference number: 2 (lower is better)
Translates to: FSVPSAILLKVIRGRQGPHRVKP*HGTGTI
Trigger: GATTGTTCCCGTGCCGTGCCATGGTTTCACCCTATG...GGGACCCTGTCTGCCCCGAATAACTTTCAGTAGTATGGCAGATGGCACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR TCA 90 bp GGGAACAATCCTCTTGGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTTCACGGGGCCTTGTaGAGTTCTGTTCTCATTGTC +
Preference number: 2 (lower is better)
Translates to: GNNPLGSSVLKVQAISKELHGAL*SSVLIV
Trigger: GACAATGAGAACAGAACTTCACAAGGCCCCGTGAAG...CTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCCAAGAGGATTGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375286.7
3UTR-3UTR GCA 90 bp AGGTCCGCCAAGGTTAGAAACCAAGAGACACAAATATTGCACATTCAGTCAAGGCTGTCTTCGGAGTCCTaGAGGTGGGGAGGGAGTTCC +
Preference number: 2 (lower is better)
Translates to: RSAKVRNQETQILHIQSRLSSES*RWGGSS
Trigger: GGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAG...CCTTGACTGAATGTGCAATATTTGTGTCTCTTGGTTTCTAACCTTGGCGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp GGGAATGCGGGGTACTCTGGCAACTCTATGCTTTACCTAAAACCTCAATTCGACACCCTTTGCATCTGCTaGACGTCTTGGAGGGTGCAT +
Preference number: 2 (lower is better)
Translates to: GNAGYSGNSMLYLKPQFDTLCIC*TSWRVH
Trigger: ATGCACCCTCCAAGACGTGCAGCAGATGCAAAGGGT...GTCGAATTGAGGTTTTAGGTAAAGCATAGAGTTGCCAGAGTACCCCGCATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp AACAACGCTCCCAGAAATCTTAAGAACCCAGAGTCCTGGAGCGCTGGAACAATAAGAACCCTTTGCATCTaGTGCACGTCTTGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: NNAPRNLKNPESWSAGTIRTLCI*CTSWRV
Trigger: CACCCTCCAAGACGTGCAGCAGATGCAAAGGGTTCT...TATTGTTCCAGCGCTCCAGGACTCTGGGTTCTTAAGATTTCTGGGAGCGTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp AACAATCCTCTTGGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTAGCAGCTAGAACCCTTTaGATCTGCTGCACGTCTTGG +
Preference number: 2 (lower is better)
Translates to: NNPLGSSVLKVQAISKELAARTL*ICCTSW
Trigger: CCAAGACGTGCAGCAGATGCAAAGGGTTCTAGCTGC...TAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCCAAGAGGATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp CCAAGAGACACAAATATTGCACATTCAGTCAAGGCATTTCCAAGAGAGTCACAGAAGGTGAGGCAAAGCTaGATGTGGTGGCAGCCGGGA +
Preference number: 2 (lower is better)
Translates to: PRDTNIAHSVKAFPRESQKVRQS*MWWQPG
Trigger: TCCCGGCTGCCACCACATGCAGCTTTGCCTCACCTT...CTGTGACTCTCTTGGAAATGCCTTGACTGAATGTGCAATATTTGTGTCTCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp AACAACGCTCCCAGAAATCTTAAGAACCCAGAGTCCTGGAGCGCTGGAACAATAAGGGGGTCCCCAGACTaGCTAGCACATACATACATA +
Preference number: 2 (lower is better)
Translates to: NNAPRNLKNPESWSAGTIRGSPD*LAHTYI
Trigger: TATGTATGTATGTGCTAGGCAGTCTGGGGACCCCCT...TATTGTTCCAGCGCTCCAGGACTCTGGGTTCTTAAGATTTCTGGGAGCGTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp TCCTTGGAGGCTCTATTCATGGGAATGCGGGGTACTCTGGCAACTCTATGCTTTCAAAGGGTCCATAAGTaGCTTCATCTTTGGTCCAGT +
Preference number: 2 (lower is better)
Translates to: SLEALFMGMRGTLATLCFQRVHK*LHLWSS
Trigger: ACTGGACCAAAGATGAAGGCACTTATGGACCCTTTG...AAAGCATAGAGTTGCCAGAGTACCCCGCATTCCCATGAATAGAGCCTCCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp CCAAGAGACACAAATATTGCACATTCAGTCAAGGCATTTCCAAGAGAGTCACAGTCGGAGTCCTGCAGGTaGGGAGGGAGTTCCTTTAGT +
Preference number: 2 (lower is better)
Translates to: PRDTNIAHSVKAFPRESQSESCR*GGSSFS
Trigger: ACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGA...CTGTGACTCTCTTGGAAATGCCTTGACTGAATGTGCAATATTTGTGTCTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp ATCAGCCAGACACTCAGAGGGCACAACGCTTTCAAGCAAGAACACCAGCCTGGTTTTCTCTGTGCCATCTaGCATACTACTGAAAGTTAT +
Preference number: 2 (lower is better)
Translates to: ISQTLRGHNAFKQEHQPGFLCAI*HTTESY
Trigger: ATAACTTTCAGTAGTATGGCAGATGGCACAGAGAAA...ACCAGGCTGGTGTTCTTGCTTGAAAGCGTTGTGCCCTCTGAGTGTCTGGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp AACAACGCTCCCAGAAATCTTAAGAACCCAGAGTCCTGGAGCGCTGGAACAATATCTCAAACCTCTTCTTaGAGGGAAAACAAGCTCTCC +
Preference number: 2 (lower is better)
Translates to: NNAPRNLKNPESWSAGTISQTSS*RENKLS
Trigger: GGAGAGCTTGTTTTCCCTCCAAGAAGAGGTTTGAGA...TATTGTTCCAGCGCTCCAGGACTCTGGGTTCTTAAGATTTCTGGGAGCGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CCA 90 bp CCAAGAGACACAAATATTGCACATTCAGTCAAGGCATTTCCAAGAGAGTCACAGGGAAGACAGGGTCAATaGGGAGTAAGAAGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: PRDTNIAHSVKAFPRESQGRQGQ*GVRRGC
Trigger: GCAGCCTCTTCTTACTCCCCATTGACCCTGTCTTCC...CTGTGACTCTCTTGGAAATGCCTTGACTGAATGTGCAATATTTGTGTCTCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CAA 90 bp GAGGGGAGCAGGTCCGCCAAGGTTAGAAACCAAGAGACACAAATATaGCACATTCAGTCAAGGCATTTCCAAGAGAGTCACAGAAATAAC +
Preference number: 2 (lower is better)
Translates to: EGSRSAKVRNQETQI*HIQSRHFQESHRNN
Trigger: GTTATTTCTGTGACTCTCTTGGAAATGCCTTGACTGAATGTGCAATATTTGTGTCTCTTGGTTTCTAACCTTGGCGGACCTGCTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR TCA 90 bp CCAAGAGACACAAATATTGCACATTCAGTCAAGGCATTTCCAAGAGAGTCACAGCCAAATCCAGAGCAATaGTCACCAACCTCCAACCAC +
Preference number: 2 (lower is better)
Translates to: PRDTNIAHSVKAFPRESQPNPEQ*SPTSNH
Trigger: GTGGTTGGAGGTTGGTGATCATTGCTCTGGATTTGG...CTGTGACTCTCTTGGAAATGCCTTGACTGAATGTGCAATATTTGTGTCTCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR GCA 90 bp TACCTAAAACCTCAATTCGACAAACTGCAGCTAGAACCCTTTGCATCTGCTGCACAGCACACCTTCTTCTaGCAACTCCTTAGTGATGAT +
Preference number: 2 (lower is better)
Translates to: YLKPQFDKLQLEPFASAAQHTFF*QLLSDD
Trigger: ATCATCACTAAGGAGTTGGCAGAAGAAGGTGTGCTG...TGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAATTGAGGTTTTAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375286.7
3UTR GCA 72 bp GAGGGTCCCGGCTGCTGGAGAAAGGTGAGGCAAAGCTaGATGTGGTGGCAGCCGGGAGCCCCAAATCCAGAG +
Preference number: 3 (lower is better)
Translates to: EGPGCWRKVRQS*MWWQPGAPNPE
Trigger: CTCTGGATTTGGGGCTCCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTTCTCCAGCAGCCGGGACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR TCA 72 bp GGGGCAGACAGGGTCCCCTGGCTCTACCGCATTCCATaGCTGCTCAGCGAGACCCACATGCTCGGAGAGAAA +
Preference number: 3 (lower is better)
Translates to: GADRVPWLYRIP*LLSETHMLGEK
Trigger: TTTCTCTCCGAGCATGTGGGTCTCGCTGAGCAGTCATGGAATGCGGTAGAGCCAGGGGACCCTGTCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 72 bp ACACAAACTCTGTGGATGCAGCCCGAAAGAGGGTGCTaGCGCATCCGGATCCTCGCCAGCATGGCACTCCAG +
Preference number: 3 (lower is better)
Translates to: TQTLWMQPERGC*RIRILASMALQ
Trigger: CTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCATCCACAGAGTTTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 72 bp TGGACACAAACTCTGTGGATGCAGCCCGAAAGAGGGTaGTGCCGCATCCGGATCCTCGCCAGCATGGCACTC +
Preference number: 3 (lower is better)
Translates to: WTQTLWMQPERG*CRIRILASMAL
Trigger: GAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCATCCACAGAGTTTGTGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 72 bp CCGCCCTCATCCCCCAGATCCCCGAAAGGCTCCGACTaGGAACCCAGCCCAGCTGCTGTTGTAAAGATCTGT +
Preference number: 3 (lower is better)
Translates to: PPSSPRSPKGSD*EPSPAAVVKIC
Trigger: ACAGATCTTTACAACAGCAGCTGGGCTGGGTTCCCAGTCGGAGCCTTTCGGGGATCTGGGGGATGAGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 72 bp GGAGGGAAAACAAGCTCTCCAGAGGGTCCCGGCTGCTaGAGAAAGGTGAGGCAAAGCTGCATGTGGTGGCAG +
Preference number: 3 (lower is better)
Translates to: GGKTSSPEGPGC*RKVRQSCMWWQ
Trigger: CTGCCACCACATGCAGCTTTGCCTCACCTTTCTCCAGCAGCCGGGACCCTCTGGAGAGCTTGTTTTCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CAA 90 bp TTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTAGGATCAGCTGTGCTTaGCAGTGGCTCGGTCACTGG +
Preference number: 3 (lower is better)
Translates to: FCSQKSHCLRSPAGGEGVRISCA*QWLGHW
Trigger: CCAGTGACCGAGCCACTGCAAAGCACAGCTGATCCT...AACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR-3UTR CAA 90 bp ACACAAACTCTGTGGATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCAGGATCAGCTGTGCTTaGCAGTGGCTCGGTCACTGG +
Preference number: 3 (lower is better)
Translates to: TQTLWMQPERGCCRIRILRISCA*QWLGHW
Trigger: CCAGTGACCGAGCCACTGCAAAGCACAGCTGATCCT...GAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCATCCACAGAGTTTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 72 bp CTTGGAGGGAAAACAAGCTCTCCAGAGGGTCCCGGCTaGTGGAGAAAGGTGAGGCAAAGCTGCATGTGGTGG +
Preference number: 3 (lower is better)
Translates to: LGGKTSSPEGPG*WRKVRQSCMWW
Trigger: CCACCACATGCAGCTTTGCCTCACCTTTCTCCAGCAGCCGGGACCCTCTGGAGAGCTTGTTTTCCCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 72 bp CAGACAGGGTCCCCTGGCTCTACCGCATTCCATGACTaGTCAGCGAGACCCACATGCTCGGAGAGAAAGTGT +
Preference number: 3 (lower is better)
Translates to: QTGSPGSTAFHD*SARPTCSERKC
Trigger: ACACTTTCTCTCCGAGCATGTGGGTCTCGCTGAGCAGTCATGGAATGCGGTAGAGCCAGGGGACCCTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 72 bp GCCAGGATCAGCTGTGCTTTGCAGTGGCTCGGTCACTaGACAGGAGTGAGGTTTCACTTCACAGAGGGGCTC +
Preference number: 3 (lower is better)
Translates to: ARISCALQWLGH*TGVRFHFTEGL
Trigger: GAGCCCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTGCAAAGCACAGCTGATCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR TCA 72 bp ATGTGGTGGCAGCCGGGAGCCCCAAATCCAGAGCAATaGTCACCAACCTCCAACCACAACAAAGGACACCCC +
Preference number: 3 (lower is better)
Translates to: MWWQPGAPNPEQ*SPTSNHNKGHP
Trigger: GGGGTGTCCTTTGTTGTGGTTGGAGGTTGGTGATCATTGCTCTGGATTTGGGGCTCCCGGCTGCCACCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR TCA 72 bp AGGCTGCAGGTGCAGTTCCTACAGCTCCCACTTGTCTaGCTCAGTGCAGGATGCCGCCTGTCTCAAACCTCT +
Preference number: 3 (lower is better)
Translates to: RLQVQFLQLPLV*LSAGCRLSQTS
Trigger: AGAGGTTTGAGACAGGCGGCATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGAACTGCACCTGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 72 bp TCTAAGAGGAATGAAGGAAACGGCGCCCTCAGGAGGTaGTCAACATTGGTGTCTGACCCCCAGGCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: SKRNEGNGALRR*STLVSDPQASL
Trigger: CAAGGAGGCCTGGGGGTCAGACACCAATGTTGAGCACCTCCTGAGGGCGCCGTTTCCTTCATTCCTCTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 72 bp GCTAACGTCCATTGTGGCACACATAGGGTGAAACCATaGCACGGCACGGGAACAATCCTCTTGGCTCCAGCG +
Preference number: 3 (lower is better)
Translates to: ANVHCGTHRVKP*HGTGTILLAPA
Trigger: CGCTGGAGCCAAGAGGATTGTTCCCGTGCCGTGCCATGGTTTCACCCTATGTGTGCCACAATGGACGTTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 72 bp ACTGCAGCTAGAACCCTTTGCATCTGCTGCACGTCTTaGAGGGTGCATAGGAGGGACGGTGTTCCGAAGCAG +
Preference number: 3 (lower is better)
Translates to: TAARTLCICCTS*RVHRRDGVPKQ
Trigger: CTGCTTCGGAACACCGTCCCTCCTATGCACCCTCCAAGACGTGCAGCAGATGCAAAGGGTTCTAGCTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 72 bp CAGAGGGCACAACGCTTTCAAGCAAGAACACCAGCCTaGTTCCTAAAGGGGGTGGGTGAACAACGCTCCCAG +
Preference number: 3 (lower is better)
Translates to: QRAQRFQARTPA*FLKGVGEQRSQ
Trigger: CTGGGAGCGTTGTTCACCCACCCCCTTTAGGAACCAGGCTGGTGTTCTTGCTTGAAAGCGTTGTGCCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 72 bp GGTGCAGTTCCTACAGCTCCCACTTGTCTGACTCAGTaGAGGATGCCGCCTGTCTCAAACCTCTTCTTGGAG +
Preference number: 3 (lower is better)
Translates to: GAVPTAPTCLTQ*RMPPVSNLFLE
Trigger: CTCCAAGAAGAGGTTTGAGACAGGCGGCATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGAACTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 72 bp TACTACCCAGACGTACCTTGGCAAGCAGGTGAGCTGTaGAGCACACAGGACATCACTTCTGAAGGTGCCCAG +
Preference number: 3 (lower is better)
Translates to: YYPDVPWQAGEL*STQDITSEGAQ
Trigger: CTGGGCACCTTCAGAAGTGATGTCCTGTGTGCTCCACAGCTCACCTGCTTGCCAAGGTACGTCTGGGTAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR TCA 72 bp AAGCAGCTGCTAACGTCCATTGTGGCACACATAGGGTaGAACCATGGCACGGCACGGGAACAATCCTCTTGG +
Preference number: 3 (lower is better)
Translates to: KQLLTSIVAHIG*NHGTAREQSSW
Trigger: CCAAGAGGATTGTTCCCGTGCCGTGCCATGGTTTCACCCTATGTGTGCCACAATGGACGTTAGCAGCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 72 bp ATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTaGAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAG +
Preference number: 3 (lower is better)
Translates to: ILQPEVALSSES*RWGGSSFSFDQ
Trigger: CTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR GCA 72 bp AGACAGGGTCAATGGGGAGTAAGAAGAGGCTGCAGGTaGAGTTCCTACAGCTCCCACTTGTCTGACTCAGTG +
Preference number: 3 (lower is better)
Translates to: RQGQWGVRRGCR*SSYSSHLSDSV
Trigger: CACTGAGTCAGACAAGTGGGAGCTGTAGGAACTGCACCTGCAGCCTCTTCTTACTCCCCATTGACCCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 72 bp GAAGGAAGACAGGGTCAATGGGGAGTAAGAAGAGGCTaGAGGTGCAGTTCCTACAGCTCCCACTTGTCTGAC +
Preference number: 3 (lower is better)
Translates to: EGRQGQWGVRRG*RCSSYSSHLSD
Trigger: GTCAGACAAGTGGGAGCTGTAGGAACTGCACCTGCAGCCTCTTCTTACTCCCCATTGACCCTGTCTTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 72 bp CAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTaGGGAGGGAGTTCCTTTAGTTTTGACCAGAACACT +
Preference number: 3 (lower is better)
Translates to: QPEVALSSESCR*GGSSFSFDQNT
Trigger: AGTGTTCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR CCA 72 bp CAACCACAACAAAGGACACCCCATCCTCCCTTTCCTTaGAGGCTCTATTCATGGGAATGCGGGGTACTCTGG +
Preference number: 3 (lower is better)
Translates to: QPQQRTPHPPFP*RLYSWECGVLW
Trigger: CCAGAGTACCCCGCATTCCCATGAATAGAGCCTCCAAGGAAAGGGAGGATGGGGTGTCCTTTGTTGTGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CAA 90 bp TTCGACAAACTGCAGCTAGAACCCTTTGCATCTGCTGCACGTCTTGGAGGGTGCACGGGAACAATCCTCTaGGCTCCAGCGTCCTTAAAG +
Preference number: 3 (lower is better)
Translates to: FDKLQLEPFASAARLGGCTGTIL*APASLK
Trigger: CTTTAAGGACGCTGGAGCCAAGAGGATTGTTCCCGT...GCACCCTCCAAGACGTGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CAA 90 bp GGGACAGTACAGAGGGGAGCAGGTCCGCCAAGGTTAGAAACCAAGAGACACAAATCCTACAGCTCCCACTaGTCTGACTCAGTGCAGGAT +
Preference number: 3 (lower is better)
Translates to: GTVQRGAGPPRLETKRHKSYSSH*SDSVQD
Trigger: ATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGA...TTTGTGTCTCTTGGTTTCTAACCTTGGCGGACCTGCTCCCCTCTGTACTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 72 bp ATTCGACAAACTGCAGCTAGAACCCTTTGCATCTGCTaGACGTCTTGGAGGGTGCATAGGAGGGACGGTGTT +
Preference number: 3 (lower is better)
Translates to: IRQTAARTLCIC*TSWRVHRRDGV
Trigger: AACACCGTCCCTCCTATGCACCCTCCAAGACGTGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 72 bp TCAATTCGACAAACTGCAGCTAGAACCCTTTGCATCTaGTGCACGTCTTGGAGGGTGCATAGGAGGGACGGT +
Preference number: 3 (lower is better)
Translates to: SIRQTAARTLCI*CTSWRVHRRDG
Trigger: ACCGTCCCTCCTATGCACCCTCCAAGACGTGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CAA 90 bp AAAGGTGAGGCAAAGCTGCATGTGGTGGCAGCCGGGAGCCCCAAATCCAGAGCAGGAGTTCCTTTAGTTTaGACCAGAACACTTCTTCAC +
Preference number: 3 (lower is better)
Translates to: KGEAKLHVVAAGSPKSRAGVPLV*TRTLLH
Trigger: GTGAAGAAGTGTTCTGGTCAAAACTAAAGGAACTCC...TGCTCTGGATTTGGGGCTCCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CAA 90 bp TTCTCTGTGCCATCTGCCATACTACTGAAAGTTATTCGGGGCAGACAGGGTCCCCCATCCTCCCTTTCCTaGGAGGCTCTATTCATGGGA +
Preference number: 3 (lower is better)
Translates to: FSVPSAILLKVIRGRQGPPSSLS*EALFMG
Trigger: TCCCATGAATAGAGCCTCCAAGGAAAGGGAGGATGG...GGGACCCTGTCTGCCCCGAATAACTTTCAGTAGTATGGCAGATGGCACAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CAA 90 bp TCCTTGGAGGCTCTATTCATGGGAATGCGGGGTACTCTGGCAACTCTATGCTTTTCCTACAGCTCCCACTaGTCTGACTCAGTGCAGGAT +
Preference number: 3 (lower is better)
Translates to: SLEALFMGMRGTLATLCFSYSSH*SDSVQD
Trigger: ATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGA...AAAGCATAGAGTTGCCAGAGTACCCCGCATTCCCATGAATAGAGCCTCCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CAA 90 bp CTGTGGAGCACACAGGACATCACTTCTGAAGGTGCCCAGGAGCACCTGGCTCGACAAGAGACACAAATATaGCACATTCAGTCAAGGCAT +
Preference number: 3 (lower is better)
Translates to: LWSTQDITSEGAQEHLARQETQI*HIQSRH
Trigger: ATGCCTTGACTGAATGTGCAATATTTGTGTCTCTTG...TCGAGCCAGGTGCTCCTGGGCACCTTCAGAAGTGATGTCCTGTGTGCTCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CCA 72 bp CTTTTCCTCTGTCAGTCTGATGTTACTCATTGGACCTaGCCAAGGAGCGCCTCTTCCAAAGTCCTCCATCCT +
Preference number: 3 (lower is better)
Translates to: LFLCQSDVTHWT*PRSASSKVLHP
Trigger: AGGATGGAGGACTTTGGAAGAGGCGCTCCTTGGCCAGGTCCAATGAGTAACATCAGACTGACAGAGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CAA 90 bp GGGACAGTACAGAGGGGAGCAGGTCCGCCAAGGTTAGAAACCAAGAGACACAAATCATCTTTGGTCCAGTaGAAAAAGCCAGGGAAGGAA +
Preference number: 3 (lower is better)
Translates to: GTVQRGAGPPRLETKRHKSSLVQ*KKPGKE
Trigger: TTCCTTCCCTGGCTTTTTCAACTGGACCAAAGATGA...TTTGTGTCTCTTGGTTTCTAACCTTGGCGGACCTGCTCCCCTCTGTACTGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR TCA 72 bp CAAAGGGTCCATAAGTGCCTTCATCTTTGGTCCAGTTaGAAAAGCCAGGGAAGGAAGACAGGGTCAATGGGG +
Preference number: 3 (lower is better)
Translates to: QRVHKCLHLWSS*KSQGRKTGSMG
Trigger: CCCCATTGACCCTGTCTTCCTTCCCTGGCTTTTTCAACTGGACCAAAGATGAAGGCACTTATGGACCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR GCA 72 bp AAAACCTCAATTCGACAAACTGCAGCTAGAACCCTTTaGATCTGCTGCACGTCTTGGAGGGTGCATAGGAGG +
Preference number: 3 (lower is better)
Translates to: KTSIRQTAARTL*ICCTSWRVHRR
Trigger: CCTCCTATGCACCCTCCAAGACGTGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAATTGAGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR-3UTR CAA 90 bp TCCTTGGAGGCTCTATTCATGGGAATGCGGGGTACTCTGGCAACTCTATGCTTTGGAGTTCCTTTAGTTTaGACCAGAACACTTCTTCAC +
Preference number: 3 (lower is better)
Translates to: SLEALFMGMRGTLATLCFGVPLV*TRTLLH
Trigger: GTGAAGAAGTGTTCTGGTCAAAACTAAAGGAACTCC...AAAGCATAGAGTTGCCAGAGTACCCCGCATTCCCATGAATAGAGCCTCCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp GTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGGCTCTGCTGCTCCCACGTTCAGCCTaGCCCAGCGGGCCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: VARSLDRSEVSLHRGALLLPRSA*PSGPRR
Trigger: GCGGCGCGGCCCGCTGGGTCAGGCTGAACGTGGGAG...CAGCAGAGCCCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp ATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCAGGCAAAGCTGCATGTaGTGGCAGCCGGGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: MQPERGCCRIRILASMALRQSCM*WQPGAP
Trigger: TGGGGCTCCCGGCTGCCACCACATGCAGCTTTGCCT...GAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp CTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCAGGCAAAGCTGCATGTaGTGGCAGCCGGGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LQPEVALSSESCRWGGSSRQSCM*WQPGAP
Trigger: TGGGGCTCCCGGCTGCCACCACATGCAGCTTTGCCT...GGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp GGGTCCCGGCTGCTGGAGAAAGGTGAGGCAAAGCTGCATGTGGTGGCAGCCGGGACAGGACATCACTTCTaGAGGTGCCCAGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: GSRLLEKGEAKLHVVAAGTGHHF*RCPGAP
Trigger: AGGTGCTCCTGGGCACCTTCAGAAGTGATGTCCTGT...CCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTTCTCCAGCAGCCGGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp ATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTCCCGAAAGAGGGTGCTaGCGCATCCGGATCCTCGCC +
Preference number: 4 (lower is better)
Translates to: ILQPEVALSSESCRWGGSPERGC*RIRILA
Trigger: GGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGG...ACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GGGTCCCGGCTGCTGGAGAAAGGTGAGGCAAAGCTGCATGTGGTGGCAGCCGGGCACGTGCCTGTGCCTTaGGGCTCAAGAGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: GSRLLEKGEAKLHVVAAGHVPVP*GSRAVF
Trigger: AAAGACTGCTCTTGAGCCCCAAGGCACAGGCACGTG...CCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTTCTCCAGCAGCCGGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp ATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCGCTGCTGGAGAAAGGTaGGGCAAAGCTGCATGTGGT +
Preference number: 4 (lower is better)
Translates to: MQPERGCCRIRILASMALAAGER*GKAACG
Trigger: ACCACATGCAGCTTTGCCTCACCTTTCTCCAGCAGC...GAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp CTGTGGAGCACACAGGACATCACTTCTGAAGGTGCCCAGGAGCACCTGGCTCGAAGCTCCAGCCCACGCTaGTCAGGCATGCCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LWSTQDITSEGAQEHLARSSSPR*SGMPQE
Trigger: TTCCTGGGGCATGCCTGATCAGCGTGGGCTGGAGCT...TCGAGCCAGGTGCTCCTGGGCACCTTCAGAAGTGATGTCCTGTGTGCTCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp CCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAAAGGAGGGAAACTTGGTaGACACCAGCCCTCCGAGAG +
Preference number: 4 (lower is better)
Translates to: PERGCCRIRILASMALQKRRETW*TPALRE
Trigger: CTCTCGGAGGGCTGGTGTTCACCAAGTTTCCCTCCT...TTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp ATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCTGCTCCCAGCCTCACTaGCATCCCCAAGAGCAGTTA +
Preference number: 4 (lower is better)
Translates to: MQPERGCCRIRILASMALCSQPH*HPQEQL
Trigger: TAACTGCTCTTGGGGATGTCAGTGAGGCTGGGAGCA...GAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp CTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCCCGGGATGCAAAGCCTaGTTGGACAGAAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LQPEVALSSESCRWGGSSPGCKA*LDRSSS
Trigger: GGAGCTGCTTCTGTCCAATCAGGCTTTGCATCCCGG...GGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581589.5
CDS-3UTR GCA 90 bp GCACATACATACATACCACTGGGGACAGTACAGAGGGGAGCAGGTCCGCCAAGGCTGGCTGGCATCACCTaGGTCCCAGACCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: AHTYIPLGTVQRGAGPPRLAGIT*VPDLGQ
Trigger: CTGCCCCAGGTCTGGGACGCAGGTGATGCCAGCCAG...CCTTGGCGGACCTGCTCCCCTCTGTACTGTCCCCAGTGGTATGTATGTATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GGGTCCCGGCTGCTGGAGAAAGGTGAGGCAAAGCTGCATGTGGTGGCAGCCGGGTGGAGGCTCTATTCATaGGAATGCGGGGTACTCTGG +
Preference number: 4 (lower is better)
Translates to: GSRLLEKGEAKLHVVAAGWRLYS*ECGVLW
Trigger: CCAGAGTACCCCGCATTCCCATGAATAGAGCCTCCA...CCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTTCTCCAGCAGCCGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GGGTCCCGGCTGCTGGAGAAAGGTGAGGCAAAGCTGCATGTGGTGGCAGCCGGGTACTGTGTCATCAGTTaGGGGATGCTGGGCACTCCT +
Preference number: 4 (lower is better)
Translates to: GSRLLEKGEAKLHVVAAGYCVIS*GMLGTP
Trigger: AGGAGTGCCCAGCATCCCCCAACTGATGACACAGTA...CCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTTCTCCAGCAGCCGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp ATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTGCGGTGTGGAGGGATTaGGAGGCGTTTCTGGGTCGG +
Preference number: 4 (lower is better)
Translates to: ILQPEVALSSESCRWGGSAVWRD*EAFLGR
Trigger: CCGACCCAGAAACGCCTCCCAATCCCTCCACACCGC...ACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581589.5
CDS-3UTR CCA 90 bp AAGGTATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGCCGGGAGCCGCGGTGTaGAGGGATTGGGAGGCGTTT +
Preference number: 4 (lower is better)
Translates to: KVFCSQKSHCLRSPAGGEPGAAV*RDWEAF
Trigger: AAACGCCTCCCAATCCCTCCACACCGCGGCTCCCGG...CTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAATACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581589.5
CDS-3UTR TCA 90 bp GGGAATGCGGGGTACTCTGGCAACTCTATGCTTTACCTAAAACCTCAATTCGACCTCCCACGTTCAGCCTaGCCCAGCGGGCCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: GNAGYSGNSMLYLKPQFDLPRSA*PSGPRR
Trigger: GCGGCGCGGCCCGCTGGGTCAGGCTGAACGTGGGAG...GTCGAATTGAGGTTTTAGGTAAAGCATAGAGTTGCCAGAGTACCCCGCATTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp GTTATTCGGGGCAGACAGGGTCCCCTGGCTCTACCGCATTCCATGACTGCTCAGGTGGCACACATAGGGTaGAACCATGGCACGGCACGG +
Preference number: 4 (lower is better)
Translates to: VIRGRQGPLALPHSMTAQVAHIG*NHGTAR
Trigger: CCGTGCCGTGCCATGGTTTCACCCTATGTGTGCCAC...CTGAGCAGTCATGGAATGCGGTAGAGCCAGGGGACCCTGTCTGCCCCGAATAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAAGGATCAGCTGTGCTTTaGAGTGGCTCGGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: PERGCCRIRILASMALQKGSAVL*SGSVTG
Trigger: TCCAGTGACCGAGCCACTGCAAAGCACAGCTGATCC...TTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CTGGAGAAAGGTGAGGCAAAGCTGCATGTGGTGGCAGCCGGGAGCCCCAAATCCGGCCAGGATCAGCTGTaGTTTGCAGTGGCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: LEKGEAKLHVVAAGSPKSGQDQL*FAVARS
Trigger: TGACCGAGCCACTGCAAAGCACAGCTGATCCTGGCC...GGATTTGGGGCTCCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTTCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp AAAGGTGAGGCAAAGCTGCATGTGGTGGCAGCCGGGAGCCCCAAATCCAGAGCACTGTCTTCGGAGTCCTaGAGGTGGGGAGGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: KGEAKLHVVAAGSPKSRALSSES*RWGGSS
Trigger: GGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAG...TGCTCTGGATTTGGGGCTCCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAAAGCACGTCTTGGAGGGTaGATAGGAGGGACGGTGTTC +
Preference number: 4 (lower is better)
Translates to: PKEGAAASGSSPAWHSRKARLGG*IGGTVF
Trigger: GAACACCGTCCCTCCTATGCACCCTCCAAGACGTGC...TTTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp CGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAAAGCAAAGCTGCATGTGGTaGCAGCCGGGAGCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: RKRVLPHPDPRQHGTPEKQSCMW*QPGAPN
Trigger: ATTTGGGGCTCCCGGCTGCCACCACATGCAGCTTTG...CTTTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp CTGTGGAGCACACAGGACATCACTTCTGAAGGTGCCCAGGAGCACCTGGCTCGAGAGGGTCCCGGCTGCTaGAGAAAGGTGAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: LWSTQDITSEGAQEHLAREGPGC*RKVRQS
Trigger: GCTTTGCCTCACCTTTCTCCAGCAGCCGGGACCCTC...TCGAGCCAGGTGCTCCTGGGCACCTTCAGAAGTGATGTCCTGTGTGCTCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp CTGTGGAGCACACAGGACATCACTTCTGAAGGTGCCCAGGAGCACCTGGCTCGAGCGCCTCAACGAGACTaGGCACAAGGCCGCAAACCA +
Preference number: 4 (lower is better)
Translates to: LWSTQDITSEGAQEHLARAPQRD*AQGRKP
Trigger: TGGTTTGCGGCCTTGTGCCCAGTCTCGTTGAGGCGC...TCGAGCCAGGTGCTCCTGGGCACCTTCAGAAGTGATGTCCTGTGTGCTCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp ATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCGGCTTTAGGCGCTTaGAGGAGGTGGCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: ILQPEVALSSESCRWGGSSALGA*RRWLLL
Trigger: GAGGAGGAGCCACCTCCTCCAAGCGCCTAAAGCCGA...ACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581589.5
CDS-3UTR TCA 90 bp GGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTAGGCCTTCCGCCCCTCTACCGCATTCCATaGCTGCTCAGCGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: GSSVLKVQAISKELGLPPLYRIP*LLSETH
Trigger: GTGGGTCTCGCTGAGCAGTCATGGAATGCGGTAGAG...GGGCGGAAGGCCTAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp ATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTCTCAACATTGGTGTCTaGCCCCCAGGCCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: ILQPEVALSSESCRWGGSLNIGV*PPGLLA
Trigger: AGCAAGGAGGCCTGGGGGTCAGACACCAATGTTGAG...ACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp GTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGGCTCTGCTGAGGAGGGAAACTTGGTaGACACCAGCCCTCCGAGAG +
Preference number: 4 (lower is better)
Translates to: VARSLDRSEVSLHRGALLRRETW*TPALRE
Trigger: CTCTCGGAGGGCTGGTGTTCACCAAGTTTCCCTCCT...CAGCAGAGCCCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp GCTTTGCAGTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGGCTGTCTTCGGAGTCCTaGAGGTGGGGAGGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: ALQWLGHWTGVRFHFTEGLSSES*RWGGSS
Trigger: GGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAG...CCCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTGCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR GCA 90 bp CTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCGCAGCTAGAACCCTTTaGATCTGCTGCACGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LQPEVALSSESCRWGGSSAARTL*ICCTSW
Trigger: CCAAGACGTGCAGCAGATGCAAAGGGTTCTAGCTGC...GGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp ATCAGCCAGACACTCAGAGGGCACAACGCTTTCAAGCAAGAACACCAGCCTGGTCCCGAAAGAGGGTGCTaGCGCATCCGGATCCTCGCC +
Preference number: 4 (lower is better)
Translates to: ISQTLRGHNAFKQEHQPGPERGC*RIRILA
Trigger: GGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGG...ACCAGGCTGGTGTTCTTGCTTGAAAGCGTTGTGCCCTCTGAGTGTCTGGCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCCAGGTGTCATTGGGTTaGAGCGAGGAGGGAAACTTG +
Preference number: 4 (lower is better)
Translates to: LQPEVALSSESCRWGGSSQVSLG*SEEGNL
Trigger: CAAGTTTCCCTCCTCGCTGCAACCCAATGACACCTG...GGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTCCTCCTCAACACGTTaGACGGGAGTCGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: LQPEVALSSESCRWGGSSSSSTR*TGVELE
Trigger: CTCTAGTTCGACTCCCGTGCAACGTGTTGAGGAGGA...GGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581589.5
CDS-3UTR CCA 90 bp GGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTAGGCCTTCCGCCCGTGCCCAGGAGCACCTaGCTCGAGGAGGCTTTCATA +
Preference number: 4 (lower is better)
Translates to: GSSVLKVQAISKELGLPPVPRST*LEEAFI
Trigger: TATGAAAGCCTCCTCGAGCCAGGTGCTCCTGGGCAC...GGGCGGAAGGCCTAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp GCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGCAGCTCCCACTTGTCTaGCTCAGTGCAGGATGCCGC +
Preference number: 4 (lower is better)
Translates to: ALSSESCRWGGSSFSFDQQLPLV*LSAGCR
Trigger: GCGGCATCCTGCACTGAGTCAGACAAGTGGGAGCTG...CTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp TGCTTTGCAGTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGCTGTCTTCGGAGTCCTaGAGGTGGGGAGGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: CFAVARSLDRSEVSLHRGLSSES*RWGGSS
Trigger: GGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAG...CCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTGCAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR GCA 90 bp AGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGCACGTCTTGGAGGGTaGATAGGAGGGACGGTGTTC +
Preference number: 4 (lower is better)
Translates to: SQKSHCLRSPAGGEGVPLARLGG*IGGTVF
Trigger: GAACACCGTCCCTCCTATGCACCCTCCAAGACGTGC...TAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAAAACCCTTTGCATCTGCTaGACGTCTTGGAGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: PKEGAAASGSSPAWHSRKTLCIC*TSWRVH
Trigger: ATGCACCCTCCAAGACGTGCAGCAGATGCAAAGGGT...TTTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp ACCAACCTCCAACCACAACAAAGGACACCCCATCCTCCCTTTCCTTGGAGGCTCCCAGAGGGTCCCGGCTaGTGGAGAAAGGTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: TNLQPQQRTPHPPFPWRLPEGPG*WRKVRQ
Trigger: TTGCCTCACCTTTCTCCAGCAGCCGGGACCCTCTGG...GAGCCTCCAAGGAAAGGGAGGATGGGGTGTCCTTTGTTGTGGTTGGAGGTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp GTTATTCGGGGCAGACAGGGTCCCCTGGCTCTACCGCATTCCATGACTGCTCAGAGAAGAGGCTGCAGGTaGAGTTCCTACAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VIRGRQGPLALPHSMTAQRRGCR*SSYSSH
Trigger: GTGGGAGCTGTAGGAACTGCACCTGCAGCCTCTTCT...CTGAGCAGTCATGGAATGCGGTAGAGCCAGGGGACCCTGTCTGCCCCGAATAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAAATCAGCGAGACCCACATaGTCGGAGAGAAAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: PKEGAAASGSSPAWHSRKSARPT*SERKCG
Trigger: TCCACACTTTCTCTCCGAGCATGTGGGTCTCGCTGA...TTTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp ATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTACCGCATTCCATGACTaGTCAGCGAGACCCACATGC +
Preference number: 4 (lower is better)
Translates to: ILQPEVALSSESCRWGGSTAFHD*SARPTC
Trigger: GCATGTGGGTCTCGCTGAGCAGTCATGGAATGCGGT...ACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp ACACAAACTCTGTGGATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCCAGTGGCTCGGTCACTaGACAGGAGTGAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: TQTLWMQPERGCCRIRILQWLGH*TGVRFH
Trigger: GTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTG...GAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCATCCACAGAGTTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGGCTCTGCTGCAGTGGCTCGGTCACTaGACAGGAGTGAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: VARSLDRSEVSLHRGALLQWLGH*TGVRFH
Trigger: GTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTG...CAGCAGAGCCCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR CCA 90 bp ATCTGCTGCACGTCTTGGAGGGTGCATAGGAGGGACGGTGTTCCGAAGCAGCTGTCGGAGTCCTGCAGGTaGGGAGGGAGTTCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: ICCTSWRVHRRDGVPKQLSESCR*GGSSFS
Trigger: ACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGA...CAGCTGCTTCGGAACACCGTCCCTCCTATGCACCCTCCAAGACGTGCAGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp AGTTATTCGGGGCAGACAGGGTCCCCTGGCTCTACCGCATTCCATGACTGCTCAGGAGGTGCTCAACATTaGTGTCTGACCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SYSGQTGSPGSTAFHDCSGGAQH*CLTPRP
Trigger: AGGCCTGGGGGTCAGACACCAATGTTGAGCACCTCC...TGAGCAGTCATGGAATGCGGTAGAGCCAGGGGACCCTGTCTGCCCCGAATAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp AAAGGTGAGGCAAAGCTGCATGTGGTGGCAGCCGGGAGCCCCAAATCCAGAGCACACGTGCCTGTGCCTTaGGGCTCAAGAGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: KGEAKLHVVAAGSPKSRAHVPVP*GSRAVF
Trigger: AAAGACTGCTCTTGAGCCCCAAGGCACAGGCACGTG...TGCTCTGGATTTGGGGCTCCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GAAAAGGTATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGGCGCTTGGAGGAGGTaGCTCCTCCTCAACACGTTG +
Preference number: 4 (lower is better)
Translates to: EKVFCSQKSHCLRSPAGGGAWRR*LLLNTL
Trigger: CAACGTGTTGAGGAGGAGCCACCTCCTCCAAGCGCC...CCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAATACCTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581589.5
CDS-3UTR TCA 90 bp GCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGTGTCTCATCCTTGTCTaGGTCCAGCTCCGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ALSSESCRWGGSSFSFDQCLILV*VQLRVL
Trigger: GAGGACCCGGAGCTGGACTCAGACAAGGATGAGACA...CTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp GGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTAGGCCTTCCGCCCCGCGATCCTCTCTCCTaGAGAATCTTCGCCTTTTCG +
Preference number: 4 (lower is better)
Translates to: GSSVLKVQAISKELGLPPRDPLS*RIFAFS
Trigger: CGAAAAGGCGAAGATTCTTCAGGAGAGAGGATCGCG...GGGCGGAAGGCCTAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp TTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCGCGATCCTCTCTCCTaGAGAATCTTCGCCTTTTCG +
Preference number: 4 (lower is better)
Translates to: FCSQKSHCLRSPAGGEGVRDPLS*RIFAFS
Trigger: CGAAAAGGCGAAGATTCTTCAGGAGAGAGGATCGCG...AACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR TCA 90 bp GGGACAGTACAGAGGGGAGCAGGTCCGCCAAGGTTAGAAACCAAGAGACACAAACAGCTCCCACTTGTCTaGCTCAGTGCAGGATGCCGC +
Preference number: 4 (lower is better)
Translates to: GTVQRGAGPPRLETKRHKQLPLV*LSAGCR
Trigger: GCGGCATCCTGCACTGAGTCAGACAAGTGGGAGCTG...TTTGTGTCTCTTGGTTTCTAACCTTGGCGGACCTGCTCCCCTCTGTACTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp CTGTGGAGCACACAGGACATCACTTCTGAAGGTGCCCAGGAGCACCTGGCTCGAGAGCAGTCCTTCCCGTaGTCACTACTTTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LWSTQDITSEGAQEHLAREQSFP*SLLSLA
Trigger: AGCCAAGGAAAGTAGTGATCACGGGAAGGACTGCTC...TCGAGCCAGGTGCTCCTGGGCACCTTCAGAAGTGATGTCCTGTGTGCTCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp ATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTGAGCAGTCCTTCCCGTaGTCACTACTTTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ILQPEVALSSESCRWGGSEQSFP*SLLSLA
Trigger: AGCCAAGGAAAGTAGTGATCACGGGAAGGACTGCTC...ACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp GAAAAGGTATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGCTCAACATTGGTGTCTaGCCCCCAGGCCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: EKVFCSQKSHCLRSPAGGLNIGV*PPGLLA
Trigger: AGCAAGGAGGCCTGGGGGTCAGACACCAATGTTGAG...CCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAATACCTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp TGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGAACAGGGTCACTGGTCACGTaGCAGCCCCAAACTGCCACG +
Preference number: 4 (lower is better)
Translates to: CLRSPAGGEGVPLVLTRTGSLVT*QPQTAT
Trigger: CGTGGCAGTTTGGGGCTGTCACGTGACCAGTGACCC...TGTTCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp ATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGCACACCTTCTTCTaGCAACTCCTTAGTGATGAT +
Preference number: 4 (lower is better)
Translates to: MQPERGCCRIRILASMALQHTFF*QLLSDD
Trigger: ATCATCACTAAGGAGTTGGCAGAAGAAGGTGTGCTG...GAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp ATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTAGGACTCTGTACACGTaGTTCACGGGGCCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: ILQPEVALSSESCRWGGSRTLYT*FTGPCE
Trigger: TTCACAAGGCCCCGTGAAGCACGTGTACAGAGTCCT...ACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR GCA 90 bp GCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGGGCCAGGATCAGCTGTaGTTTGCAGTGGCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: ALSSESCRWGGSSFSFDQGQDQL*FAVARS
Trigger: TGACCGAGCCACTGCAAAGCACAGCTGATCCTGGCC...CTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR GCA 90 bp ACACAAACTCTGTGGATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCAGAACCCTTTGCATCTaGTGCACGTCTTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: TQTLWMQPERGCCRIRILRTLCI*CTSWRV
Trigger: CACCCTCCAAGACGTGCAGCAGATGCAAAGGGTTCT...GAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCATCCACAGAGTTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp GTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGGCTCTGCTGGCAGCTAGAACCCTTTaGATCTGCTGCACGTCTTGG +
Preference number: 4 (lower is better)
Translates to: VARSLDRSEVSLHRGALLAARTL*ICCTSW
Trigger: CCAAGACGTGCAGCAGATGCAAAGGGTTCTAGCTGC...CAGCAGAGCCCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp ACCAACCTCCAACCACAACAAAGGACACCCCATCCTCCCTTTCCTTGGAGGCTCAAGGTGAGGCAAAGCTaGATGTGGTGGCAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: TNLQPQQRTPHPPFPWRLKVRQS*MWWQPG
Trigger: TCCCGGCTGCCACCACATGCAGCTTTGCCTCACCTT...GAGCCTCCAAGGAAAGGGAGGATGGGGTGTCCTTTGTTGTGGTTGGAGGTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp GTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGGCTCTGCTGGGAGTAAGAAGAGGCTaGAGGTGCAGTTCCTACAGC +
Preference number: 4 (lower is better)
Translates to: VARSLDRSEVSLHRGALLGVRRG*RCSSYS
Trigger: GCTGTAGGAACTGCACCTGCAGCCTCTTCTTACTCC...CAGCAGAGCCCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp TGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGAACACAGCCCGAAAGAGGGTaGTGCCGCATCCGGATCCTC +
Preference number: 4 (lower is better)
Translates to: CLRSPAGGEGVPLVLTRTQPERG*CRIRIL
Trigger: GAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTG...TGTTCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp TTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTTCAGCGAGACCCACATaGTCGGAGAGAAAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: FCSQKSHCLRSPAGGEGVSARPT*SERKCG
Trigger: TCCACACTTTCTCTCCGAGCATGTGGGTCTCGCTGA...AACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp TCCTTGGAGGCTCTATTCATGGGAATGCGGGGTACTCTGGCAACTCTATGCTTTCTGGCTGGCATCACCTaGGTCCCAGACCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLEALFMGMRGTLATLCFLAGIT*VPDLGQ
Trigger: CTGCCCCAGGTCTGGGACGCAGGTGATGCCAGCCAG...AAAGCATAGAGTTGCCAGAGTACCCCGCATTCCCATGAATAGAGCCTCCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CCTCTTGGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTAGGCCTTTCATCAGTTGGGGGATaGTGGGCACTCCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PLGSSVLKVQAISKELGLSSVGG*WALLGL
Trigger: CAGGCCCAGGAGTGCCCAGCATCCCCCAACTGATGA...AAGGCCTAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCCAAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGATCATCAGTTGGGGGATaGTGGGCACTCCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: HCLRSPAGGEGVPLVLTRSSVGG*WALLGL
Trigger: CAGGCCCAGGAGTGCCCAGCATCCCCCAACTGATGA...TCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp AGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGGCAGAGAAATGACTTaGGCTCCCGGCCTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SQKSHCLRSPAGGEGVPLGREMT*APGLRS
Trigger: AGACCTTAGGCCGGGAGCCCAAGTCATTTCTCTGCC...TAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp CCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAAAGCTCTCCTGAAGGTCTaGAGTTTTCGGGGTCTTAGT +
Preference number: 4 (lower is better)
Translates to: PKEGAAASGSSPAWHSRKALLKV*SFRGLS
Trigger: ACTAAGACCCCGAAAACTCCAGACCTTCAGGAGAGC...TTTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp AGTTATTCGGGGCAGACAGGGTCCCCTGGCTCTACCGCATTCCATGACTGCTCAAGCTGTGCTTTGCAGTaGCTCGGTCACTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: SYSGQTGSPGSTAFHDCSSCALQ*LGHWTG
Trigger: TCCTGTCCAGTGACCGAGCCACTGCAAAGCACAGCT...TGAGCAGTCATGGAATGCGGTAGAGCCAGGGGACCCTGTCTGCCCCGAATAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp AGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAAGCTGTGCTTTGCAGTaGCTCGGTCACTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: SQKSHCLRSPAGGEGVPLSCALQ*LGHWTG
Trigger: TCCTGTCCAGTGACCGAGCCACTGCAAAGCACAGCT...TAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR CCA 90 bp TTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTGGAAGACAGGGTCAATaGGGAGTAAGAAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: FCSQKSHCLRSPAGGEGVGRQGQ*GVRRGC
Trigger: GCAGCCTCTTCTTACTCCCCATTGACCCTGTCTTCC...AACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp CTGTGGAGCACACAGGACATCACTTCTGAAGGTGCCCAGGAGCACCTGGCTCGATGGACACAAACTCTGTaGATGCAGCCCGAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LWSTQDITSEGAQEHLARWTQTL*MQPERG
Trigger: CCCTCTTTCGGGCTGCATCCACAGAGTTTGTGTCCA...TCGAGCCAGGTGCTCCTGGGCACCTTCAGAAGTGATGTCCTGTGTGCTCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTAGGCCTTCCGCCCCAAGCAGGTGAGCTGTaGAGCACACAGGACATCACT +
Preference number: 4 (lower is better)
Translates to: GSSVLKVQAISKELGLPPQAGEL*STQDIT
Trigger: AGTGATGTCCTGTGTGCTCCACAGCTCACCTGCTTG...GGGCGGAAGGCCTAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp AGTTATTCGGGGCAGACAGGGTCCCCTGGCTCTACCGCATTCCATGACTGCTCATACCCAGACGTACCTTaGCAAGCAGGTGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SYSGQTGSPGSTAFHDCSYPDVP*QAGELW
Trigger: CCACAGCTCACCTGCTTGCCAAGGTACGTCTGGGTA...TGAGCAGTCATGGAATGCGGTAGAGCCAGGGGACCCTGTCTGCCCCGAATAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp AAGGTATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGCAAGAACACCAGCCTaGTTCCTAAAGGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: KVFCSQKSHCLRSPAGGEARTPA*FLKGVG
Trigger: ACCCACCCCCTTTAGGAACCAGGCTGGTGTTCTTGC...CTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAATACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp AAGGTATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGCGCGATCCTCTCTCCTaGAGAATCTTCGCCTTTTCG +
Preference number: 4 (lower is better)
Translates to: KVFCSQKSHCLRSPAGGERDPLS*RIFAFS
Trigger: CGAAAAGGCGAAGATTCTTCAGGAGAGAGGATCGCG...CTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAATACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR GCA 90 bp CCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAACAGCACACCTTCTTCTaGCAACTCCTTAGTGATGAT +
Preference number: 4 (lower is better)
Translates to: PERGCCRIRILASMALQKQHTFF*QLLSDD
Trigger: ATCATCACTAAGGAGTTGGCAGAAGAAGGTGTGCTG...TTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp GCTTTGCAGTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGGAGGACTCTGTACACGTaGTTCACGGGGCCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: ALQWLGHWTGVRFHFTEGRTLYT*FTGPCE
Trigger: TTCACAAGGCCCCGTGAAGCACGTGTACAGAGTCCT...CCCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR GCA 90 bp GAAAAGGTATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGGATCAGCTGTGCTTTaGAGTGGCTCGGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: EKVFCSQKSHCLRSPAGGGSAVL*SGSVTG
Trigger: TCCAGTGACCGAGCCACTGCAAAGCACAGCTGATCC...CCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAATACCTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR GCA 90 bp GTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGGCTCTGCTGCTCTATTCATGGGAATaGGGGGTACTCTGGCAACTC +
Preference number: 4 (lower is better)
Translates to: VARSLDRSEVSLHRGALLLYSWE*GVLWQL
Trigger: GAGTTGCCAGAGTACCCCGCATTCCCATGAATAGAG...CAGCAGAGCCCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp TGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGAACACCAGAGGGTCCCGGCTaGTGGAGAAAGGTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: CLRSPAGGEGVPLVLTRTPEGPG*WRKVRQ
Trigger: TTGCCTCACCTTTCTCCAGCAGCCGGGACCCTCTGG...TGTTCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CCAGACGTACCTTGGCAAGCAGGTGAGCTGTGGAGCACACAGGACATCACTTCTAGAAGAGGCTGCAGGTaGAGTTCCTACAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PDVPWQAGELWSTQDITSRRGCR*SSYSSH
Trigger: GTGGGAGCTGTAGGAACTGCACCTGCAGCCTCTTCT...AGAAGTGATGTCCTGTGTGCTCCACAGCTCACCTGCTTGCCAAGGTACGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp AGAGGCTGCAGGTGCAGTTCCTACAGCTCCCACTTGTCTGACTCAGTGCAGGATACCGCATTCCATGACTaGTCAGCGAGACCCACATGC +
Preference number: 4 (lower is better)
Translates to: RGCRCSSYSSHLSDSVQDTAFHD*SARPTC
Trigger: GCATGTGGGTCTCGCTGAGCAGTCATGGAATGCGGT...ATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGAACTGCACCTGCAGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp GGGACAGTACAGAGGGGAGCAGGTCCGCCAAGGTTAGAAACCAAGAGACACAAAGGCGCCCTCAGGAGGTaGTCAACATTGGTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: GTVQRGAGPPRLETKRHKGALRR*STLVSD
Trigger: GTCAGACACCAATGTTGAGCACCTCCTGAGGGCGCC...TTTGTGTCTCTTGGTTTCTAACCTTGGCGGACCTGCTCCCCTCTGTACTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp TTCGACAAACTGCAGCTAGAACCCTTTGCATCTGCTGCACGTCTTGGAGGGTGCGGCGCCCTCAGGAGGTaGTCAACATTGGTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: FDKLQLEPFASAARLGGCGALRR*STLVSD
Trigger: GTCAGACACCAATGTTGAGCACCTCCTGAGGGCGCC...GCACCCTCCAAGACGTGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp GGGTCCCCAGACTGCCTAGCACATACATACATACCACTGGGGACAGTACAGAGGATTTCCCAGAGCACGTaGCTGTGCCTTGGGGCTCAA +
Preference number: 4 (lower is better)
Translates to: GSPDCLAHTYIPLGTVQRISQST*LCLGAQ
Trigger: TTGAGCCCCAAGGCACAGGCACGTGCTCTGGGAAAT...CCTCTGTACTGTCCCCAGTGGTATGTATGTATGTGCTAGGCAGTCTGGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp AGGGTGCATAGGAGGGACGGTGTTCCGAAGCAGCTGCTAACGTCCATTGTGGCACTAAGGTCTGTCTGGTaGTCACGAAGTAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: RVHRRDGVPKQLLTSIVALRSVW*SRSRCL
Trigger: GAGGCACCTACTTCGTGACCACCAGACAGACCTTAG...TGCCACAATGGACGTTAGCAGCTGCTTCGGAACACCGTCCCTCCTATGCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GAAAAGGTATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGAGCTGTGCTTTGCAGTaGCTCGGTCACTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: EKVFCSQKSHCLRSPAGGSCALQ*LGHWTG
Trigger: TCCTGTCCAGTGACCGAGCCACTGCAAAGCACAGCT...CCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAATACCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR CCA 90 bp TCCTTGGAGGCTCTATTCATGGGAATGCGGGGTACTCTGGCAACTCTATGCTTTCCGAAAGGCTCCGACTaGGAACCCAGCCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLEALFMGMRGTLATLCFPKGSD*EPSPAA
Trigger: AGCAGCTGGGCTGGGTTCCCAGTCGGAGCCTTTCGG...AAAGCATAGAGTTGCCAGAGTACCCCGCATTCCCATGAATAGAGCCTCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp AGTTATTCGGGGCAGACAGGGTCCCCTGGCTCTACCGCATTCCATGACTGCTCACATAGGGTGAAACCATaGCACGGCACGGGAACAATC +
Preference number: 4 (lower is better)
Translates to: SYSGQTGSPGSTAFHDCSHRVKP*HGTGTI
Trigger: GATTGTTCCCGTGCCGTGCCATGGTTTCACCCTATG...TGAGCAGTCATGGAATGCGGTAGAGCCAGGGGACCCTGTCTGCCCCGAATAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp TGCTTTGCAGTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGATCTGCTGCACGTCTTaGAGGGTGCATAGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: CFAVARSLDRSEVSLHRGICCTS*RVHRRD
Trigger: GTCCCTCCTATGCACCCTCCAAGACGTGCAGCAGAT...CCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTGCAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGATCTGCTGCACGTCTTaGAGGGTGCATAGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: ALSSESCRWGGSSFSFDQICCTS*RVHRRD
Trigger: GTCCCTCCTATGCACCCTCCAAGACGTGCAGCAGAT...CTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp TTCGACAAACTGCAGCTAGAACCCTTTGCATCTGCTGCACGTCTTGGAGGGTGCCAAAGCTGCATGTGGTaGCAGCCGGGAGCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: FDKLQLEPFASAARLGGCQSCMW*QPGAPN
Trigger: ATTTGGGGCTCCCGGCTGCCACCACATGCAGCTTTG...GCACCCTCCAAGACGTGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp CACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGAGTGCCCAGGAGCACCTaGCTCGAGGAGGCTTTCATA +
Preference number: 4 (lower is better)
Translates to: HCLRSPAGGEGVPLVLTRVPRST*LEEAFI
Trigger: TATGAAAGCCTCCTCGAGCCAGGTGCTCCTGGGCAC...TCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp CCTCTTGGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTAGGCCTTGGAGGTGCTCAACATTaGTGTCTGACCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PLGSSVLKVQAISKELGLGGAQH*CLTPRP
Trigger: AGGCCTGGGGGTCAGACACCAATGTTGAGCACCTCC...AAGGCCTAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCCAAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp TGCTTTGCAGTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGGCAAGAACACCAGCCTaGTTCCTAAAGGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: CFAVARSLDRSEVSLHRGARTPA*FLKGVG
Trigger: ACCCACCCCCTTTAGGAACCAGGCTGGTGTTCTTGC...CCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTGCAAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CAA 72 bp CGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTaGACCAGAACACTTCTTCACAGGGGGCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: RSPAGGEGVPLV*TRTLLHRGPGS
Trigger: TGATCCTGGCCCCCTGTGAAGAAGTGTTCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
3UTR CAA 72 bp AGAAGAGGCTGCAGGTGCAGTTCCTACAGCTCCCACTaGTCTGACTCAGTGCAGGATGCCGCCTGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: RRGCRCSSYSSH*SDSVQDAACLK
Trigger: TTTGAGACAGGCGGCATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGAACTGCACCTGCAGCCTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp GCTTTGCAGTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGGCCAAATCCAGAGCAATaGTCACCAACCTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: ALQWLGHWTGVRFHFTEGPNPEQ*SPTSNH
Trigger: GTGGTTGGAGGTTGGTGATCATTGCTCTGGATTTGG...CCCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTGCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp ACACAAACTCTGTGGATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCCATCTGCCATACTACTaGAAGTTATTCGGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: TQTLWMQPERGCCRIRILHLPYY*KLFGAD
Trigger: GTCTGCCCCGAATAACTTTCAGTAGTATGGCAGATG...GAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCATCCACAGAGTTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp GTGCAGGATGCCGCCTGTCTCAAACCTCTTCTTGGAGGGAAAACAAGCTCTCCACCACGCAGACCTCTCTaGTGTGATCAGCCAGACACT +
Preference number: 4 (lower is better)
Translates to: VQDAACLKPLLGGKTSSPPRRPL*CDQPDT
Trigger: AGTGTCTGGCTGATCACATCAGAGAGGTCTGCGTGG...TGGAGAGCTTGTTTTCCCTCCAAGAAGAGGTTTGAGACAGGCGGCATCCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp AGAGGCTGCAGGTGCAGTTCCTACAGCTCCCACTTGTCTGACTCAGTGCAGGATACCCTTTGCATCTGCTaGACGTCTTGGAGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: RGCRCSSYSSHLSDSVQDTLCIC*TSWRVH
Trigger: ATGCACCCTCCAAGACGTGCAGCAGATGCAAAGGGT...ATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGAACTGCACCTGCAGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp GCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGAGAACCCTTTGCATCTaGTGCACGTCTTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ALSSESCRWGGSSFSFDQRTLCI*CTSWRV
Trigger: CACCCTCCAAGACGTGCAGCAGATGCAAAGGGTTCT...CTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp GAAAAGGTATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGACTTGTCTGACTCAGTaGAGGATGCCGCCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: EKVFCSQKSHCLRSPAGGTCLTQ*RMPPVS
Trigger: TGAGACAGGCGGCATCCTGCACTGAGTCAGACAAGT...CCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAATACCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAAACAAAGGGTCCATAAGTaGCTTCATCTTTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PKEGAAASGSSPAWHSRKQRVHK*LHLWSS
Trigger: ACTGGACCAAAGATGAAGGCACTTATGGACCCTTTG...TTTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp CCAGACGTACCTTGGCAAGCAGGTGAGCTGTGGAGCACACAGGACATCACTTCTCTAAGGTCTGTCTGGTaGTCACGAAGTAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: PDVPWQAGELWSTQDITSLRSVW*SRSRCL
Trigger: GAGGCACCTACTTCGTGACCACCAGACAGACCTTAG...AGAAGTGATGTCCTGTGTGCTCCACAGCTCACCTGCTTGCCAAGGTACGTCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp CACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGATCGGAGTCCTGCAGGTaGGGAGGGAGTTCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: HCLRSPAGGEGVPLVLTRSESCR*GGSSFS
Trigger: ACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGA...TCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR CCA 90 bp GGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTAGGCCTTCCGCCCGAATGCGGGGTACTCTaGCAACTCTATGCTTTACCT +
Preference number: 4 (lower is better)
Translates to: GSSVLKVQAISKELGLPPECGVL*QLYALP
Trigger: AGGTAAAGCATAGAGTTGCCAGAGTACCCCGCATTC...GGGCGGAAGGCCTAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp ACACAAACTCTGTGGATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCCATCCTCCCTTTCCTTaGAGGCTCTATTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: TQTLWMQPERGCCRIRILHPPFP*RLYSWE
Trigger: TTCCCATGAATAGAGCCTCCAAGGAAAGGGAGGATG...GAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCATCCACAGAGTTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp AGAGGCTGCAGGTGCAGTTCCTACAGCTCCCACTTGTCTGACTCAGTGCAGGATTGGACACAAACTCTGTaGATGCAGCCCGAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: RGCRCSSYSSHLSDSVQDWTQTL*MQPERG
Trigger: CCCTCTTTCGGGCTGCATCCACAGAGTTTGTGTCCA...ATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGAACTGCACCTGCAGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGCAAGCAGGTGAGCTGTaGAGCACACAGGACATCACT +
Preference number: 4 (lower is better)
Translates to: ALSSESCRWGGSSFSFDQQAGEL*STQDIT
Trigger: AGTGATGTCCTGTGTGCTCCACAGCTCACCTGCTTG...CTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp CCTCTTGGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTAGGCCTTTACCCAGACGTACCTTaGCAAGCAGGTGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PLGSSVLKVQAISKELGLYPDVP*QAGELW
Trigger: CCACAGCTCACCTGCTTGCCAAGGTACGTCTGGGTA...AAGGCCTAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCCAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp ACACAAACTCTGTGGATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCAGAGTCCTGGAGCGCTaGAACAATACAGGTGTCATT +
Preference number: 4 (lower is better)
Translates to: TQTLWMQPERGCCRIRILRVLER*NNTGVI
Trigger: AATGACACCTGTATTGTTCCAGCGCTCCAGGACTCT...GAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCATCCACAGAGTTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp AAGGTATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGCTCCTGTCTCATCCCTaGCTGCATAATGACGCCATA +
Preference number: 4 (lower is better)
Translates to: KVFCSQKSHCLRSPAGGELLSHP*LHNDAI
Trigger: TATGGCGTCATTATGCAGCCAGGGATGAGACAGGAG...CTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAATACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581589.5
3UTR CAA 72 bp CCAACCACAACAAAGGACACCCCATCCTCCCTTTCCTaGGAGGCTCTATTCATGGGAATGCGGGGTACTCTG +
Preference number: 4 (lower is better)
Translates to: PTTTKDTPSSLS*EALFMGMRGTL
Trigger: CAGAGTACCCCGCATTCCCATGAATAGAGCCTCCAAGGAAAGGGAGGATGGGGTGTCCTTTGTTGTGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp AACAACGCTCCCAGAAATCTTAAGAACCCAGAGTCCTGGAGCGCTGGAACAATAGTGGCACACATAGGGTaGAACCATGGCACGGCACGG +
Preference number: 4 (lower is better)
Translates to: NNAPRNLKNPESWSAGTIVAHIG*NHGTAR
Trigger: CCGTGCCGTGCCATGGTTTCACCCTATGTGTGCCAC...TATTGTTCCAGCGCTCCAGGACTCTGGGTTCTTAAGATTTCTGGGAGCGTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp GCACATACATACATACCACTGGGGACAGTACAGAGGGGAGCAGGTCCGCCAAGGCATCTTTGGTCCAGTTaGAAAAGCCAGGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: AHTYIPLGTVQRGAGPPRHLWSS*KSQGRK
Trigger: CTTCCTTCCCTGGCTTTTTCAACTGGACCAAAGATG...CCTTGGCGGACCTGCTCCCCTCTGTACTGTCCCCAGTGGTATGTATGTATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp AGGGTGCATAGGAGGGACGGTGTTCCGAAGCAGCTGCTAACGTCCATTGTGGCACATCTTTGGTCCAGTTaGAAAAGCCAGGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RVHRRDGVPKQLLTSIVAHLWSS*KSQGRK
Trigger: CTTCCTTCCCTGGCTTTTTCAACTGGACCAAAGATG...TGCCACAATGGACGTTAGCAGCTGCTTCGGAACACCGTCCCTCCTATGCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp TTCTCTGTGCCATCTGCCATACTACTGAAAGTTATTCGGGGCAGACAGGGTCCCACAGGACATCACTTCTaGAGGTGCCCAGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: FSVPSAILLKVIRGRQGPTGHHF*RCPGAP
Trigger: AGGTGCTCCTGGGCACCTTCAGAAGTGATGTCCTGT...GGGACCCTGTCTGCCCCGAATAACTTTCAGTAGTATGGCAGATGGCACAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp GTTCTCATTGTCCCGTATCCTTTCCTTAACCAGCCGCACAAGGGACGCGATGTTCCACGCAGACCTCTCTaGTGTGATCAGCCAGACACT +
Preference number: 4 (lower is better)
Translates to: VLIVPYPFLNQPHKGRDVPRRPL*CDQPDT
Trigger: AGTGTCTGGCTGATCACATCAGAGAGGTCTGCGTGG...AACATCGCGTCCCTTGTGCGGCTGGTTAAGGAAAGGATACGGGACAATGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375286.7
CDS-3UTR GCA 90 bp GTGCAGGATGCCGCCTGTCTCAAACCTCTTCTTGGAGGGAAAACAAGCTCTCCAACTTGTCTGACTCAGTaGAGGATGCCGCCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: VQDAACLKPLLGGKTSSPTCLTQ*RMPPVS
Trigger: TGAGACAGGCGGCATCCTGCACTGAGTCAGACAAGT...TGGAGAGCTTGTTTTCCCTCCAAGAAGAGGTTTGAGACAGGCGGCATCCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp AGAGGCTGCAGGTGCAGTTCCTACAGCTCCCACTTGTCTGACTCAGTGCAGGATAGGGGGTCCCCAGACTaGCTAGCACATACATACATA +
Preference number: 4 (lower is better)
Translates to: RGCRCSSYSSHLSDSVQDRGSPD*LAHTYI
Trigger: TATGTATGTATGTGCTAGGCAGTCTGGGGACCCCCT...ATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGAACTGCACCTGCAGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp GTGCAGGATGCCGCCTGTCTCAAACCTCTTCTTGGAGGGAAAACAAGCTCTCCACAGGTGTCATTGGGTTaGAGCGAGGAGGGAAACTTG +
Preference number: 4 (lower is better)
Translates to: VQDAACLKPLLGGKTSSPQVSLG*SEEGNL
Trigger: CAAGTTTCCCTCCTCGCTGCAACCCAATGACACCTG...TGGAGAGCTTGTTTTCCCTCCAAGAAGAGGTTTGAGACAGGCGGCATCCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp TCCATAAGTGCCTTCATCTTTGGTCCAGTTGAAAAAGCCAGGGAAGGAAGACAGCCGAAAGGCTCCGACTaGGAACCCAGCCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SISAFIFGPVEKAREGRQPKGSD*EPSPAA
Trigger: AGCAGCTGGGCTGGGTTCCCAGTCGGAGCCTTTCGG...CTGTCTTCCTTCCCTGGCTTTTTCAACTGGACCAAAGATGAAGGCACTTATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp CACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGACATAGGGTGAAACCATaGCACGGCACGGGAACAATC +
Preference number: 4 (lower is better)
Translates to: HCLRSPAGGEGVPLVLTRHRVKP*HGTGTI
Trigger: GATTGTTCCCGTGCCGTGCCATGGTTTCACCCTATG...TCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GGGAATGCGGGGTACTCTGGCAACTCTATGCTTTACCTAAAACCTCAATTCGACGAGGGTCCCGGCTGCTaGAGAAAGGTGAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: GNAGYSGNSMLYLKPQFDEGPGC*RKVRQS
Trigger: GCTTTGCCTCACCTTTCTCCAGCAGCCGGGACCCTC...GTCGAATTGAGGTTTTAGGTAAAGCATAGAGTTGCCAGAGTACCCCGCATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GTTATTCGGGGCAGACAGGGTCCCCTGGCTCTACCGCATTCCATGACTGCTCAGTCTCAAACCTCTTCTTaGAGGGAAAACAAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VIRGRQGPLALPHSMTAQSQTSS*RENKLS
Trigger: GGAGAGCTTGTTTTCCCTCCAAGAAGAGGTTTGAGA...CTGAGCAGTCATGGAATGCGGTAGAGCCAGGGGACCCTGTCTGCCCCGAATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GTGCAGGATGCCGCCTGTCTCAAACCTCTTCTTGGAGGGAAAACAAGCTCTCCAGGAAGACAGGGTCAATaGGGAGTAAGAAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VQDAACLKPLLGGKTSSPGRQGQ*GVRRGC
Trigger: GCAGCCTCTTCTTACTCCCCATTGACCCTGTCTTCC...TGGAGAGCTTGTTTTCCCTCCAAGAAGAGGTTTGAGACAGGCGGCATCCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp CCAGACGTACCTTGGCAAGCAGGTGAGCTGTGGAGCACACAGGACATCACTTCTGGATCCTCGCCAGCATaGCACTCCAGAAAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: PDVPWQAGELWSTQDITSGSSPA*HSRKES
Trigger: ACTTTCTTTTCTGGAGTGCCATGCTGGCGAGGATCC...AGAAGTGATGTCCTGTGTGCTCCACAGCTCACCTGCTTGCCAAGGTACGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp TTCTCTGTGCCATCTGCCATACTACTGAAAGTTATTCGGGGCAGACAGGGTCCCGTTACTCATTGGACCTaGCCAAGGAGCGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FSVPSAILLKVIRGRQGPVTHWT*PRSASS
Trigger: GGAAGAGGCGCTCCTTGGCCAGGTCCAATGAGTAAC...GGGACCCTGTCTGCCCCGAATAACTTTCAGTAGTATGGCAGATGGCACAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGGTCCTCTTGTCTCCCTaGGTCTTGGATCTTACAGCT +
Preference number: 4 (lower is better)
Translates to: ALSSESCRWGGSSFSFDQVLLSP*VLDLTA
Trigger: AGCTGTAAGATCCAAGACCCAGGGAGACAAGAGGAC...CTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581589.5
CDS-3UTR TCA 90 bp TACCTAAAACCTCAATTCGACAAACTGCAGCTAGAACCCTTTGCATCTGCTGCAAGCTCCAGCCCACGCTaGTCAGGCATGCCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: YLKPQFDKLQLEPFASAASSSPR*SGMPQE
Trigger: TTCCTGGGGCATGCCTGATCAGCGTGGGCTGGAGCT...TGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAATTGAGGTTTTAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp AACAACGCTCCCAGAAATCTTAAGAACCCAGAGTCCTGGAGCGCTGGAACAATAAGGGGCTCTGCTGACTaGTCTCCTGAAGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NNAPRNLKNPESWSAGTIRGSAD*SPEGLE
Trigger: CTCCAGACCTTCAGGAGAGCAGTCAGCAGAGCCCCT...TATTGTTCCAGCGCTCCAGGACTCTGGGTTCTTAAGATTTCTGGGAGCGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp AACAACGCTCCCAGAAATCTTAAGAACCCAGAGTCCTGGAGCGCTGGAACAATAGGCCAGGATCAGCTGTaGTTTGCAGTGGCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: NNAPRNLKNPESWSAGTIGQDQL*FAVARS
Trigger: TGACCGAGCCACTGCAAAGCACAGCTGATCCTGGCC...TATTGTTCCAGCGCTCCAGGACTCTGGGTTCTTAAGATTTCTGGGAGCGTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp AGGGTGCATAGGAGGGACGGTGTTCCGAAGCAGCTGCTAACGTCCATTGTGGCATCTGAAAAGGTATTCTaGAGCCAGAAGTCGCACTGT +
Preference number: 4 (lower is better)
Translates to: RVHRRDGVPKQLLTSIVASEKVF*SQKSHC
Trigger: ACAGTGCGACTTCTGGCTGCAGAATACCTTTTCAGA...TGCCACAATGGACGTTAGCAGCTGCTTCGGAACACCGTCCCTCCTATGCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp ATCAGCCAGACACTCAGAGGGCACAACGCTTTCAAGCAAGAACACCAGCCTGGTGGAACCCAGCCCAGCTaGTGTTGTAAAGATCTGTTC +
Preference number: 4 (lower is better)
Translates to: ISQTLRGHNAFKQEHQPGGTQPS*CCKDLF
Trigger: GAACAGATCTTTACAACAGCAGCTGGGCTGGGTTCC...ACCAGGCTGGTGTTCTTGCTTGAAAGCGTTGTGCCCTCTGAGTGTCTGGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp TTCTCTGTGCCATCTGCCATACTACTGAAAGTTATTCGGGGCAGACAGGGTCCCGGAGTAAGAAGAGGCTaGAGGTGCAGTTCCTACAGC +
Preference number: 4 (lower is better)
Translates to: FSVPSAILLKVIRGRQGPGVRRG*RCSSYS
Trigger: GCTGTAGGAACTGCACCTGCAGCCTCTTCTTACTCC...GGGACCCTGTCTGCCCCGAATAACTTTCAGTAGTATGGCAGATGGCACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp AAGGTATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGCAAAGGGTCCATAAGTaGCTTCATCTTTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: KVFCSQKSHCLRSPAGGEQRVHK*LHLWSS
Trigger: ACTGGACCAAAGATGAAGGCACTTATGGACCCTTTG...CTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAATACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGAACAGGGGGTCCCCAGACTaGCTAGCACATACATACATA +
Preference number: 4 (lower is better)
Translates to: LSSESCRWGGSSFSFDQNRGSPD*LAHTYI
Trigger: TATGTATGTATGTGCTAGGCAGTCTGGGGACCCCCT...GTTCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp ATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTGTATACCGGGTTCTATaGTATGCTACAGATACAGAG +
Preference number: 4 (lower is better)
Translates to: ILQPEVALSSESCRWGGSVYRVL*YATDTE
Trigger: CTCTGTATCTGTAGCATAGCATAGAACCCGGTATAC...ACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp AGAGGCTGCAGGTGCAGTTCCTACAGCTCCCACTTGTCTGACTCAGTGCAGGATATACATACATACCACTaGGGACAGTACAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RGCRCSSYSSHLSDSVQDIHTYH*GQYRGE
Trigger: CTCCCCTCTGTACTGTCCCCAGTGGTATGTATGTAT...ATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGAACTGCACCTGCAGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp CCAGACGTACCTTGGCAAGCAGGTGAGCTGTGGAGCACACAGGACATCACTTCTATACATACATACCACTaGGGACAGTACAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PDVPWQAGELWSTQDITSIHTYH*GQYRGE
Trigger: CTCCCCTCTGTACTGTCCCCAGTGGTATGTATGTAT...AGAAGTGATGTCCTGTGTGCTCCACAGCTCACCTGCTTGCCAAGGTACGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGGCTCTGCTGTCATGGCGGCAACTATaGAATCTAAGAGGAATGAAG +
Preference number: 4 (lower is better)
Translates to: VARSLDRSEVSLHRGALLSWRQL*NLRGMK
Trigger: CTTCATTCCTCTTAGATTCCATAGTTGCCGCCATGA...CAGCAGAGCCCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp GGGAATGCGGGGTACTCTGGCAACTCTATGCTTTACCTAAAACCTCAATTCGACGCTGCTGGAGAAAGGTaGGGCAAAGCTGCATGTGGT +
Preference number: 4 (lower is better)
Translates to: GNAGYSGNSMLYLKPQFDAAGER*GKAACG
Trigger: ACCACATGCAGCTTTGCCTCACCTTTCTCCAGCAGC...GTCGAATTGAGGTTTTAGGTAAAGCATAGAGTTGCCAGAGTACCCCGCATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp CCAAGAGACACAAATATTGCACATTCAGTCAAGGCATTTCCAAGAGAGTCACAGGGGTCACTGGTCACGTaGCAGCCCCAAACTGCCACG +
Preference number: 4 (lower is better)
Translates to: PRDTNIAHSVKAFPRESQGSLVT*QPQTAT
Trigger: CGTGGCAGTTTGGGGCTGTCACGTGACCAGTGACCC...CTGTGACTCTCTTGGAAATGCCTTGACTGAATGTGCAATATTTGTGTCTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp GCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGCTGCCTGATCCTCATTaGCGTAGTTATAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: ALSSESCRWGGSSFSFDQLPDPH*RSYRKI
Trigger: GATCTTCCTATAACTACGGCAATGAGGATCAGGCAG...CTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR GCA 90 bp GCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGAACACAGAGGAATTCTaGCTGATCCTCATTGCCGTA +
Preference number: 4 (lower is better)
Translates to: ALSSESCRWGGSSFSFDQNTEEF*LILIAV
Trigger: TACGGCAATGAGGATCAGGCAGAATTCCTCTGTGTT...CTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR GCA 90 bp AACAATCCTCTTGGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTAGGATCAGCTGTGCTTTaGAGTGGCTCGGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: NNPLGSSVLKVQAISKELGSAVL*SGSVTG
Trigger: TCCAGTGACCGAGCCACTGCAAAGCACAGCTGATCC...TAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCCAAGAGGATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp ACCAACCTCCAACCACAACAAAGGACACCCCATCCTCCCTTTCCTTGGAGGCTCTCTGAAAAGGTATTCTaGAGCCAGAAGTCGCACTGT +
Preference number: 4 (lower is better)
Translates to: TNLQPQQRTPHPPFPWRLSEKVF*SQKSHC
Trigger: ACAGTGCGACTTCTGGCTGCAGAATACCTTTTCAGA...GAGCCTCCAAGGAAAGGGAGGATGGGGTGTCCTTTGTTGTGGTTGGAGGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CCAAGAGACACAAATATTGCACATTCAGTCAAGGCATTTCCAAGAGAGTCACAGCAGCCCGAAAGAGGGTaGTGCCGCATCCGGATCCTC +
Preference number: 4 (lower is better)
Translates to: PRDTNIAHSVKAFPRESQQPERG*CRIRIL
Trigger: GAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTG...CTGTGACTCTCTTGGAAATGCCTTGACTGAATGTGCAATATTTGTGTCTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAAATTTCTCTGTGCCATCTaGCATACTACTGAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: PKEGAAASGSSPAWHSRKFLCAI*HTTESY
Trigger: ATAACTTTCAGTAGTATGGCAGATGGCACAGAGAAA...TTTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp GGGAATGCGGGGTACTCTGGCAACTCTATGCTTTACCTAAAACCTCAATTCGACATTTCCCAGAGCACGTaGCTGTGCCTTGGGGCTCAA +
Preference number: 4 (lower is better)
Translates to: GNAGYSGNSMLYLKPQFDISQST*LCLGAQ
Trigger: TTGAGCCCCAAGGCACAGGCACGTGCTCTGGGAAAT...GTCGAATTGAGGTTTTAGGTAAAGCATAGAGTTGCCAGAGTACCCCGCATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp ACACAAACTCTGTGGATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCAAAAGACAGAATCAGTaGTACTGTGTCATCAGTTGG +
Preference number: 4 (lower is better)
Translates to: TQTLWMQPERGCCRIRILKRQNQ*YCVISW
Trigger: CCAACTGATGACACAGTAGCACTGATTCTGTCTTTT...GAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCATCCACAGAGTTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGAACGATTCCAGCATCCCTTaGTCAGCTGTTCCTATTCGT +
Preference number: 4 (lower is better)
Translates to: LSSESCRWGGSSFSFDQNDSSIP*SAVPIR
Trigger: ACGAATAGGAACAGCTGAGCAAGGGATGCTGGAATC...GTTCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581589.5
CDS-3UTR CCA 90 bp AACAATCCTCTTGGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTATCGGAGTCCTGCAGGTaGGGAGGGAGTTCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: NNPLGSSVLKVQAISKELSESCR*GGSSFS
Trigger: ACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGA...TAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCCAAGAGGATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp TGTGCTTTGCAGTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGCATCCTCCCTTTCCTTaGAGGCTCTATTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: CALQWLGHWTGVRFHFTEHPPFP*RLYSWE
Trigger: TTCCCATGAATAGAGCCTCCAAGGAAAGGGAGGATG...CTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTGCAAAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp AACAATCCTCTTGGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTAGTTACTCATTGGACCTaGCCAAGGAGCGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: NNPLGSSVLKVQAISKELVTHWT*PRSASS
Trigger: GGAAGAGGCGCTCCTTGGCCAGGTCCAATGAGTAAC...TAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCCAAGAGGATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp TACCTAAAACCTCAATTCGACAAACTGCAGCTAGAACCCTTTGCATCTGCTGCAGCGCCTCAACGAGACTaGGCACAAGGCCGCAAACCA +
Preference number: 4 (lower is better)
Translates to: YLKPQFDKLQLEPFASAAAPQRD*AQGRKP
Trigger: TGGTTTGCGGCCTTGTGCCCAGTCTCGTTGAGGCGC...TGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAATTGAGGTTTTAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GTTCTCATTGTCCCGTATCCTTTCCTTAACCAGCCGCACAAGGGACGCGATGTTAAGAACCCAGAGTCCTaGAGCGCTGGAACAATACAG +
Preference number: 4 (lower is better)
Translates to: VLIVPYPFLNQPHKGRDVKNPES*SAGTIQ
Trigger: CTGTATTGTTCCAGCGCTCCAGGACTCTGGGTTCTT...AACATCGCGTCCCTTGTGCGGCTGGTTAAGGAAAGGATACGGGACAATGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375286.7
CDS-3UTR TCA 90 bp TACCTAAAACCTCAATTCGACAAACTGCAGCTAGAACCCTTTGCATCTGCTGCACTCTACCGCATTCCATaGCTGCTCAGCGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: YLKPQFDKLQLEPFASAALYRIP*LLSETH
Trigger: GTGGGTCTCGCTGAGCAGTCATGGAATGCGGTAGAG...TGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAATTGAGGTTTTAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGACAGCACACCTTCTTCTaGCAACTCCTTAGTGATGAT +
Preference number: 4 (lower is better)
Translates to: HCLRSPAGGEGVPLVLTRQHTFF*QLLSDD
Trigger: ATCATCACTAAGGAGTTGGCAGAAGAAGGTGTGCTG...TCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR GCA 90 bp GGGACAGTACAGAGGGGAGCAGGTCCGCCAAGGTTAGAAACCAAGAGACACAAACTGCCTGATCCTCATTaGCGTAGTTATAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: GTVQRGAGPPRLETKRHKLPDPH*RSYRKI
Trigger: GATCTTCCTATAACTACGGCAATGAGGATCAGGCAG...TTTGTGTCTCTTGGTTTCTAACCTTGGCGGACCTGCTCCCCTCTGTACTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp ATCAGCCAGACACTCAGAGGGCACAACGCTTTCAAGCAAGAACACCAGCCTGGTAACACAGAGGAATTCTaGCTGATCCTCATTGCCGTA +
Preference number: 4 (lower is better)
Translates to: ISQTLRGHNAFKQEHQPGNTEEF*LILIAV
Trigger: TACGGCAATGAGGATCAGGCAGAATTCCTCTGTGTT...ACCAGGCTGGTGTTCTTGCTTGAAAGCGTTGTGCCCTCTGAGTGTCTGGCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp AACAATCCTCTTGGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTATACTGTGTCATCAGTTaGGGGATGCTGGGCACTCCT +
Preference number: 4 (lower is better)
Translates to: NNPLGSSVLKVQAISKELYCVIS*GMLGTP
Trigger: AGGAGTGCCCAGCATCCCCCAACTGATGACACAGTA...TAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCCAAGAGGATTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp GGGAATGCGGGGTACTCTGGCAACTCTATGCTTTACCTAAAACCTCAATTCGACCTTCACGGGGCCTTGTaGAGTTCTGTTCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: GNAGYSGNSMLYLKPQFDLHGAL*SSVLIV
Trigger: GACAATGAGAACAGAACTTCACAAGGCCCCGTGAAG...GTCGAATTGAGGTTTTAGGTAAAGCATAGAGTTGCCAGAGTACCCCGCATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp TTCTCTGTGCCATCTGCCATACTACTGAAAGTTATTCGGGGCAGACAGGGTCCCCTGCCTGATCCTCATTaGCGTAGTTATAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: FSVPSAILLKVIRGRQGPLPDPH*RSYRKI
Trigger: GATCTTCCTATAACTACGGCAATGAGGATCAGGCAG...GGGACCCTGTCTGCCCCGAATAACTTTCAGTAGTATGGCAGATGGCACAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp TGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGAACAAACACAGAGGAATTCTaGCTGATCCTCATTGCCGTA +
Preference number: 4 (lower is better)
Translates to: CLRSPAGGEGVPLVLTRTNTEEF*LILIAV
Trigger: TACGGCAATGAGGATCAGGCAGAATTCCTCTGTGTT...TGTTCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR GCA 90 bp AACAATCCTCTTGGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTAGGAACCCAGCCCAGCTaGTGTTGTAAAGATCTGTTC +
Preference number: 4 (lower is better)
Translates to: NNPLGSSVLKVQAISKELGTQPS*CCKDLF
Trigger: GAACAGATCTTTACAACAGCAGCTGGGCTGGGTTCC...TAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCCAAGAGGATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp GCTTTGCAGTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGGTTTCTCTGTGCCATCTaGCATACTACTGAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: ALQWLGHWTGVRFHFTEGFLCAI*HTTESY
Trigger: ATAACTTTCAGTAGTATGGCAGATGGCACAGAGAAA...CCCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTGCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GGGAATGCGGGGTACTCTGGCAACTCTATGCTTTACCTAAAACCTCAATTCGACGGATCCTCGCCAGCATaGCACTCCAGAAAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: GNAGYSGNSMLYLKPQFDGSSPA*HSRKES
Trigger: ACTTTCTTTTCTGGAGTGCCATGCTGGCGAGGATCC...GTCGAATTGAGGTTTTAGGTAAAGCATAGAGTTGCCAGAGTACCCCGCATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp GGGAATGCGGGGTACTCTGGCAACTCTATGCTTTACCTAAAACCTCAATTCGACAAGAACCCAGAGTCCTaGAGCGCTGGAACAATACAG +
Preference number: 4 (lower is better)
Translates to: GNAGYSGNSMLYLKPQFDKNPES*SAGTIQ
Trigger: CTGTATTGTTCCAGCGCTCCAGGACTCTGGGTTCTT...GTCGAATTGAGGTTTTAGGTAAAGCATAGAGTTGCCAGAGTACCCCGCATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp AACAATCCTCTTGGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTACATCTGCCATACTACTaGAAGTTATTCGGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: NNPLGSSVLKVQAISKELHLPYY*KLFGAD
Trigger: GTCTGCCCCGAATAACTTTCAGTAGTATGGCAGATG...TAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCCAAGAGGATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp CCAAGAGACACAAATATTGCACATTCAGTCAAGGCATTTCCAAGAGAGTCACAGTGCTCCCAGCCTCACTaGCATCCCCAAGAGCAGTTA +
Preference number: 4 (lower is better)
Translates to: PRDTNIAHSVKAFPRESQCSQPH*HPQEQL
Trigger: TAACTGCTCTTGGGGATGTCAGTGAGGCTGGGAGCA...CTGTGACTCTCTTGGAAATGCCTTGACTGAATGTGCAATATTTGTGTCTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp TCTGGCAACTCTATGCTTTACCTAAAACCTCAATTCGACAAACTGCAGCTAGAAAAGGTGAGGCAAAGCTaGATGTGGTGGCAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: SGNSMLYLKPQFDKLQLEKVRQS*MWWQPG
Trigger: TCCCGGCTGCCACCACATGCAGCTTTGCCTCACCTT...TTCTAGCTGCAGTTTGTCGAATTGAGGTTTTAGGTAAAGCATAGAGTTGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp CCAAGAGACACAAATATTGCACATTCAGTCAAGGCATTTCCAAGAGAGTCACAGGGCAGAGAAATGACTTaGGCTCCCGGCCTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: PRDTNIAHSVKAFPRESQGREMT*APGLRS
Trigger: AGACCTTAGGCCGGGAGCCCAAGTCATTTCTCTGCC...CTGTGACTCTCTTGGAAATGCCTTGACTGAATGTGCAATATTTGTGTCTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp AACAACGCTCCCAGAAATCTTAAGAACCCAGAGTCCTGGAGCGCTGGAACAATAAGAGTCCTGGAGCGCTaGAACAATACAGGTGTCATT +
Preference number: 4 (lower is better)
Translates to: NNAPRNLKNPESWSAGTIRVLER*NNTGVI
Trigger: AATGACACCTGTATTGTTCCAGCGCTCCAGGACTCT...TATTGTTCCAGCGCTCCAGGACTCTGGGTTCTTAAGATTTCTGGGAGCGTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp TACCTAAAACCTCAATTCGACAAACTGCAGCTAGAACCCTTTGCATCTGCTGCACTTCACGGGGCCTTGTaGAGTTCTGTTCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: YLKPQFDKLQLEPFASAALHGAL*SSVLIV
Trigger: GACAATGAGAACAGAACTTCACAAGGCCCCGTGAAG...TGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAATTGAGGTTTTAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR TCA 90 bp AGGTCCGCCAAGGTTAGAAACCAAGAGACACAAATATTGCACATTCAGTCAAGGCCAAATCCAGAGCAATaGTCACCAACCTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: RSAKVRNQETQILHIQSRPNPEQ*SPTSNH
Trigger: GTGGTTGGAGGTTGGTGATCATTGCTCTGGATTTGG...CCTTGACTGAATGTGCAATATTTGTGTCTCTTGGTTTCTAACCTTGGCGGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp AGGTCCGCCAAGGTTAGAAACCAAGAGACACAAATATTGCACATTCAGTCAAGGCTCTATTCATGGGAATaGGGGGTACTCTGGCAACTC +
Preference number: 4 (lower is better)
Translates to: RSAKVRNQETQILHIQSRLYSWE*GVLWQL
Trigger: GAGTTGCCAGAGTACCCCGCATTCCCATGAATAGAG...CCTTGACTGAATGTGCAATATTTGTGTCTCTTGGTTTCTAACCTTGGCGGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp TCCATAAGTGCCTTCATCTTTGGTCCAGTTGAAAAAGCCAGGGAAGGAAGACAGGAATGCGGGGTACTCTaGCAACTCTATGCTTTACCT +
Preference number: 4 (lower is better)
Translates to: SISAFIFGPVEKAREGRQECGVL*QLYALP
Trigger: AGGTAAAGCATAGAGTTGCCAGAGTACCCCGCATTC...CTGTCTTCCTTCCCTGGCTTTTTCAACTGGACCAAAGATGAAGGCACTTATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CCA 90 bp TACCTAAAACCTCAATTCGACAAACTGCAGCTAGAACCCTTTGCATCTGCTGCATCTCAAACCTCTTCTTaGAGGGAAAACAAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: YLKPQFDKLQLEPFASAASQTSS*RENKLS
Trigger: GGAGAGCTTGTTTTCCCTCCAAGAAGAGGTTTGAGA...TGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAATTGAGGTTTTAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CAA 72 bp AGGTCCGCCAAGGTTAGAAACCAAGAGACACAAATATaGCACATTCAGTCAAGGCATTTCCAAGAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: RSAKVRNQETQI*HIQSRHFQESH
Trigger: GTGACTCTCTTGGAAATGCCTTGACTGAATGTGCAATATTTGTGTCTCTTGGTTTCTAACCTTGGCGGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
3UTR CAA 72 bp ATCTTCGCCTTTTCGCTCGGCTCTATGACGATGCCATaGGTAGAATTATTTAGTTCTCTGGAGACAACACAG +
Preference number: 4 (lower is better)
Translates to: IFAFSLGSMTMP*VELFSSLETTQ
Trigger: CTGTGTTGTCTCCAGAGAACTAAATAATTCTACCAATGGCATCGTCATAGAGCCGAGCGAAAAGGCGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375286.7
CDS-3UTR CCA 90 bp TACCTAAAACCTCAATTCGACAAACTGCAGCTAGAACCCTTTGCATCTGCTGCATCATGGCGGCAACTATaGAATCTAAGAGGAATGAAG +
Preference number: 4 (lower is better)
Translates to: YLKPQFDKLQLEPFASAASWRQL*NLRGMK
Trigger: CTTCATTCCTCTTAGATTCCATAGTTGCCGCCATGA...TGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAATTGAGGTTTTAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR GCA 90 bp CCAAGAGACACAAATATTGCACATTCAGTCAAGGCATTTCCAAGAGAGTCACAGGTATACCGGGTTCTATaGTATGCTACAGATACAGAG +
Preference number: 4 (lower is better)
Translates to: PRDTNIAHSVKAFPRESQVYRVL*YATDTE
Trigger: CTCTGTATCTGTAGCATAGCATAGAACCCGGTATAC...CTGTGACTCTCTTGGAAATGCCTTGACTGAATGTGCAATATTTGTGTCTCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS GCA 90 bp ACTCTGCCCCAGGGCCAACCTGCAGGGATGCCTTCTCTGCTTTCCTaGTGCCGCCCTCTAGCTAGGCATGTTCCCCCAACCCGCCCGCCC +
Preference number: 5 (lower is better)
Translates to: TLPQGQPAGMPSLLS*CRPLARHVPPTRPP
Trigger: GGGCGGGCGGGTTGGGGGAACATGCCTAGCTAGAGGGCGGCAGCAGGAAAGCAGAGAAGGCATCCCTGCAGGTTGGCCCTGGGGCAGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584767.5
CDS-3UTR CAA 90 bp ATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCGGCAGAGAAATGACTaGGGCTCCCGGCCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: MQPERGCCRIRILASMALRQRND*GSRPKV
Trigger: GACCTTAGGCCGGGAGCCCAAGTCATTTCTCTGCCG...GAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp GGGTCCCGGCTGCTGGAGAAAGGTGAGGCAAAGCTGCATGTGGTGGCAGCCGGGCTACTGTGTCATCAGTaGGGGGATGCTGGGCACTCC +
Preference number: 5 (lower is better)
Translates to: GSRLLEKGEAKLHVVAAGLLCHQ*GDAGHS
Trigger: GGAGTGCCCAGCATCCCCCAACTGATGACACAGTAG...CCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTTCTCCAGCAGCCGGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp CTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCCGGCAGAGAAATGACTaGGGCTCCCGGCCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: LQPEVALSSESCRWGGSSRQRND*GSRPKV
Trigger: GACCTTAGGCCGGGAGCCCAAGTCATTTCTCTGCCG...GGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp CTGGAGAAAGGTGAGGCAAAGCTGCATGTGGTGGCAGCCGGGAGCCCCAAATCCGCTCCTGTCTCATCCTaGTCTGAGTCCAGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: LEKGEAKLHVVAAGSPKSAPVSS*SESSSG
Trigger: CCCGGAGCTGGACTCAGACAAGGATGAGACAGGAGC...GGATTTGGGGCTCCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTTCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp CGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAAAGCTACTGTGTCATCAGTaGGGGGATGCTGGGCACTCC +
Preference number: 5 (lower is better)
Translates to: RKRVLPHPDPRQHGTPEKLLCHQ*GDAGHS
Trigger: GGAGTGCCCAGCATCCCCCAACTGATGACACAGTAG...CTTTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS GCA 90 bp CAGCCAAGGGCAGCGTCGGTTACCATTGTGCTTCTCTTGGGACCTTaGCAATCTGCCCCAGCATCGCAGGGCAAAGGAGACTTGGGGACA +
Preference number: 5 (lower is better)
Translates to: QPRAASVTIVLLLGP*QSAPASQGKGDLGT
Trigger: TGTCCCCAAGTCTCCTTTGCCCTGCGATGCTGGGGCAGATTGGCAAGGTCCCAAGAGAAGCACAATGGTAACCGACGCTGCCCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000579242.5
ENST00000582840.5
ENST00000584767.5
CDS CCA 90 bp GGATTGGGAGGCGTTTCTGGGTCGGCTTTAGGCGCTTGGAGGAGGTaGCTCCTCCTCAACACGTTGCACGGGAGTCGAACTAGAGACCAA +
Preference number: 5 (lower is better)
Translates to: GLGGVSGSALGAWRR*LLLNTLHGSRTRDQ
Trigger: TTGGTCTCTAGTTCGACTCCCGTGCAACGTGTTGAGGAGGAGCCACCTCCTCCAAGCGCCTAAAGCCGACCCAGAAACGCCTCCCAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579242.5
ENST00000581589.5
ENST00000582840.5
ENST00000584570.5
ENST00000584767.5
CDS-3UTR CAA 90 bp GCTTTGCAGTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGGAGGAGGTGCTCAACATaGGTGTCTGACCCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: ALQWLGHWTGVRFHFTEGRRCST*VSDPQA
Trigger: GGCCTGGGGGTCAGACACCAATGTTGAGCACCTCCT...CCCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTGCAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp AGGGTGCATAGGAGGGACGGTGTTCCGAAGCAGCTGCTAACGTCCATTGTGGCAGCACGTGCCTGTGCCTaGGGGCTCAAGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: RVHRRDGVPKQLLTSIVAARACA*GLKSSL
Trigger: AAGACTGCTCTTGAGCCCCAAGGCACAGGCACGTGC...TGCCACAATGGACGTTAGCAGCTGCTTCGGAACACCGTCCCTCCTATGCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp AGTTATTCGGGGCAGACAGGGTCCCCTGGCTCTACCGCATTCCATGACTGCTCAAGCGAGGAGGGAAACTaGGTGAACACCAGCCCTCCG +
Preference number: 5 (lower is better)
Translates to: SYSGQTGSPGSTAFHDCSSEEGN*VNTSPP
Trigger: CGGAGGGCTGGTGTTCACCAAGTTTCCCTCCTCGCT...TGAGCAGTCATGGAATGCGGTAGAGCCAGGGGACCCTGTCTGCCCCGAATAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp GCACATACATACATACCACTGGGGACAGTACAGAGGGGAGCAGGTCCGCCAAGGAGCGAGGAGGGAAACTaGGTGAACACCAGCCCTCCG +
Preference number: 5 (lower is better)
Translates to: AHTYIPLGTVQRGAGPPRSEEGN*VNTSPP
Trigger: CGGAGGGCTGGTGTTCACCAAGTTTCCCTCCTCGCT...CCTTGGCGGACCTGCTCCCCTCTGTACTGTCCCCAGTGGTATGTATGTATGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp CTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCACAGGTGTCATTGGGTaGCAGCGAGGAGGGAAACTT +
Preference number: 5 (lower is better)
Translates to: LQPEVALSSESCRWGGSSTGVIG*QRGGKL
Trigger: AAGTTTCCCTCCTCGCTGCAACCCAATGACACCTGT...GGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp TGCTTTGCAGTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGGTCGGCTTTAGGCGCTaGGAGGAGGTGGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: CFAVARSLDRSEVSLHRGVGFRR*EEVAPP
Trigger: AGGAGGAGCCACCTCCTCCAAGCGCCTAAAGCCGAC...CCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTGCAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581589.5
CDS-3UTR CAA 90 bp CTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGAACCGCGGTGTGGAGGGATaGGGAGGCGTTTCTGGGTCG +
Preference number: 5 (lower is better)
Translates to: LSSESCRWGGSSFSFDQNRGVEG*GGVSGS
Trigger: CGACCCAGAAACGCCTCCCAATCCCTCCACACCGCG...GTTCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581589.5
CDS-3UTR CAA 90 bp ACCAACCTCCAACCACAACAAAGGACACCCCATCCTCCCTTTCCTTGGAGGCTCGCTCCTGTCTCATCCTaGTCTGAGTCCAGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: TNLQPQQRTPHPPFPWRLAPVSS*SESSSG
Trigger: CCCGGAGCTGGACTCAGACAAGGATGAGACAGGAGC...GAGCCTCCAAGGAAAGGGAGGATGGGGTGTCCTTTGTTGTGGTTGGAGGTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp GTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGGCTCTGCTGACGGGAACAATCCTCTaGGCTCCAGCGTCCTTAAAG +
Preference number: 5 (lower is better)
Translates to: VARSLDRSEVSLHRGALLTGTIL*APASLK
Trigger: CTTTAAGGACGCTGGAGCCAAGAGGATTGTTCCCGT...CAGCAGAGCCCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp ACACAAACTCTGTGGATGCAGCCCGAAAGAGGGTGCTGCCGCATCCGGATCCTCCCATCCTCCCTTTCCTaGGAGGCTCTATTCATGGGA +
Preference number: 5 (lower is better)
Translates to: TQTLWMQPERGCCRIRILPSSLS*EALFMG
Trigger: TCCCATGAATAGAGCCTCCAAGGAAAGGGAGGATGG...GAGGATCCGGATGCGGCAGCACCCTCTTTCGGGCTGCATCCACAGAGTTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp TTCGACAAACTGCAGCTAGAACCCTTTGCATCTGCTGCACGTCTTGGAGGGTGCAGGAGGTGCTCAACATaGGTGTCTGACCCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: FDKLQLEPFASAARLGGCRRCST*VSDPQA
Trigger: GGCCTGGGGGTCAGACACCAATGTTGAGCACCTCCT...GCACCCTCCAAGACGTGCAGCAGATGCAAAGGGTTCTAGCTGCAGTTTGTCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS GCA 90 bp GGCAGCGTCGGTTACCATTGTGCTTCTCTTGGGACCTTGCCAATCTaGCCCAGCATCGCAGGGCAAAGGAGACTTGGGGACATTCTTTTC +
Preference number: 5 (lower is better)
Translates to: GSVGYHCASLGTLPI*PSIAGQRRLGDILF
Trigger: GAAAAGAATGTCCCCAAGTCTCCTTTGCCCTGCGATGCTGGGGCAGATTGGCAAGGTCCCAAGAGAAGCACAATGGTAACCGACGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000579242.5
ENST00000582840.5
ENST00000584767.5
CDS CCA 90 bp AAGAAGTTCAGCCAAGGGCAGCGTCGGTTACCATTGTGCTTCTCTTaGGACCTTGCCAATCTGCCCCAGCATCGCAGGGCAAAGGAGACT +
Preference number: 5 (lower is better)
Translates to: KKFSQGQRRLPLCFS*DLANLPQHRRAKET
Trigger: AGTCTCCTTTGCCCTGCGATGCTGGGGCAGATTGGCAAGGTCCCAAGAGAAGCACAATGGTAACCGACGCTGCCCTTGGCTGAACTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579242.5
ENST00000582840.5
ENST00000584767.5
CDS-3UTR CAA 90 bp AGGGTGCATAGGAGGGACGGTGTTCCGAAGCAGCTGCTAACGTCCATTGTGGCATCCTACAGCTCCCACTaGTCTGACTCAGTGCAGGAT +
Preference number: 5 (lower is better)
Translates to: RVHRRDGVPKQLLTSIVASYSSH*SDSVQD
Trigger: ATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGA...TGCCACAATGGACGTTAGCAGCTGCTTCGGAACACCGTCCCTCCTATGCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp TGCTTTGCAGTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGCTCCTCCTCAACACGTaGCACGGGAGTCGAACTAGA +
Preference number: 5 (lower is better)
Translates to: CFAVARSLDRSEVSLHRGLLLNT*HGSRTR
Trigger: TCTAGTTCGACTCCCGTGCAACGTGTTGAGGAGGAG...CCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTGCAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581589.5
CDS-3UTR CAA 90 bp GCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGACGGGAACAATCCTCTaGGCTCCAGCGTCCTTAAAG +
Preference number: 5 (lower is better)
Translates to: ALSSESCRWGGSSFSFDQTGTIL*APASLK
Trigger: CTTTAAGGACGCTGGAGCCAAGAGGATTGTTCCCGT...CTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp TGCTTTGCAGTGGCTCGGTCACTGGACAGGAGTGAGGTTTCACTTCACAGAGGGTCCTACAGCTCCCACTaGTCTGACTCAGTGCAGGAT +
Preference number: 5 (lower is better)
Translates to: CFAVARSLDRSEVSLHRGSYSSH*SDSVQD
Trigger: ATCCTGCACTGAGTCAGACAAGTGGGAGCTGTAGGA...CCCTCTGTGAAGTGAAACCTCACTCCTGTCCAGTGACCGAGCCACTGCAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp AAGGTATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGAGTTGTCTCCCTGGGTCTaGGATCTTACAGCTCTAACC +
Preference number: 5 (lower is better)
Translates to: KVFCSQKSHCLRSPAGGELSPWV*DLTALT
Trigger: GGTTAGAGCTGTAAGATCCAAGACCCAGGGAGACAA...CTCCCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAATACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581589.5
CDS-3UTR CAA 90 bp CACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGACGATTCCAGCATCCCTaGCTCAGCTGTTCCTATTCG +
Preference number: 5 (lower is better)
Translates to: HCLRSPAGGEGVPLVLTRRFQHP*LSCSYS
Trigger: CGAATAGGAACAGCTGAGCAAGGGATGCTGGAATCG...TCTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581589.5
CDS-3UTR CAA 90 bp AACAATCCTCTTGGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTAAGGATCAGCTGTGCTTaGCAGTGGCTCGGTCACTGG +
Preference number: 5 (lower is better)
Translates to: NNPLGSSVLKVQAISKELRISCA*QWLGHW
Trigger: CCAGTGACCGAGCCACTGCAAAGCACAGCTGATCCT...TAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCCAAGAGGATTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp AGGGTGCATAGGAGGGACGGTGTTCCGAAGCAGCTGCTAACGTCCATTGTGGCATCATCTTTGGTCCAGTaGAAAAAGCCAGGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: RVHRRDGVPKQLLTSIVASSLVQ*KKPGKE
Trigger: TTCCTTCCCTGGCTTTTTCAACTGGACCAAAGATGA...TGCCACAATGGACGTTAGCAGCTGCTTCGGAACACCGTCCCTCCTATGCACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp CCGAAAGAGGGTGCTGCCGCATCCGGATCCTCGCCAGCATGGCACTCCAGAAAACAAGAGACACAAATATaGCACATTCAGTCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: PKEGAAASGSSPAWHSRKQETQI*HIQSRH
Trigger: ATGCCTTGACTGAATGTGCAATATTTGTGTCTCTTG...TTTTCTGGAGTGCCATGCTGGCGAGGATCCGGATGCGGCAGCACCCTCTTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp ATCTGCTGCACGTCTTGGAGGGTGCATAGGAGGGACGGTGTTCCGAAGCAGCTGAAGCTCAAAAGACATTaGGCACAGTCTGCAGTCATT +
Preference number: 5 (lower is better)
Translates to: ICCTSWRVHRRDGVPKQLKLKRH*AQSAVI
Trigger: AATGACTGCAGACTGTGCCAAATGTCTTTTGAGCTT...CAGCTGCTTCGGAACACCGTCCCTCCTATGCACCCTCCAAGACGTGCAGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp ACCAACCTCCAACCACAACAAAGGACACCCCATCCTCCCTTTCCTTGGAGGCTCTCATCTTTGGTCCAGTaGAAAAAGCCAGGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: TNLQPQQRTPHPPFPWRLSSLVQ*KKPGKE
Trigger: TTCCTTCCCTGGCTTTTTCAACTGGACCAAAGATGA...GAGCCTCCAAGGAAAGGGAGGATGGGGTGTCCTTTGTTGTGGTTGGAGGTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp AAAGGTGAGGCAAAGCTGCATGTGGTGGCAGCCGGGAGCCCCAAATCCAGAGCACAAGAGACACAAATATaGCACATTCAGTCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: KGEAKLHVVAAGSPKSRAQETQI*HIQSRH
Trigger: ATGCCTTGACTGAATGTGCAATATTTGTGTCTCTTG...TGCTCTGGATTTGGGGCTCCCGGCTGCCACCACATGCAGCTTTGCCTCACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp AGGGTGCATAGGAGGGACGGTGTTCCGAAGCAGCTGCTAACGTCCATTGTGGCAAAGCTCAAAAGACATTaGGCACAGTCTGCAGTCATT +
Preference number: 5 (lower is better)
Translates to: RVHRRDGVPKQLLTSIVAKLKRH*AQSAVI
Trigger: AATGACTGCAGACTGTGCCAAATGTCTTTTGAGCTT...TGCCACAATGGACGTTAGCAGCTGCTTCGGAACACCGTCCCTCCTATGCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp TCCTTGGAGGCTCTATTCATGGGAATGCGGGGTACTCTGGCAACTCTATGCTTTACAGGTGTCATTGGGTaGCAGCGAGGAGGGAAACTT +
Preference number: 5 (lower is better)
Translates to: SLEALFMGMRGTLATLCFTGVIG*QRGGKL
Trigger: AAGTTTCCCTCCTCGCTGCAACCCAATGACACCTGT...AAAGCATAGAGTTGCCAGAGTACCCCGCATTCCCATGAATAGAGCCTCCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp GAAAAGGTATTCTGCAGCCAGAAGTCGCACTGTCTTCGGAGTCCTGCAGGTGGGGGAGTTCCTTTAGTTTaGACCAGAACACTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: EKVFCSQKSHCLRSPAGGGVPLV*TRTLLH
Trigger: GTGAAGAAGTGTTCTGGTCAAAACTAAAGGAACTCC...CCCACCTGCAGGACTCCGAAGACAGTGCGACTTCTGGCTGCAGAATACCTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR CAA 90 bp GGGTCCCCAGACTGCCTAGCACATACATACATACCACTGGGGACAGTACAGAGGGGAGTTCCTTTAGTTTaGACCAGAACACTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: GSPDCLAHTYIPLGTVQRGVPLV*TRTLLH
Trigger: GTGAAGAAGTGTTCTGGTCAAAACTAAAGGAACTCC...CCTCTGTACTGTCCCCAGTGGTATGTATGTATGTGCTAGGCAGTCTGGGGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp GCACTGTCTTCGGAGTCCTGCAGGTGGGGAGGGAGTTCCTTTAGTTTTGACCAGGGAGTTCCTTTAGTTTaGACCAGAACACTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: ALSSESCRWGGSSFSFDQGVPLV*TRTLLH
Trigger: GTGAAGAAGTGTTCTGGTCAAAACTAAAGGAACTCC...CTGGTCAAAACTAAAGGAACTCCCTCCCCACCTGCAGGACTCCGAAGACAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322444.7
ENST00000375286.7
ENST00000581589.5
CDS-3UTR CAA 90 bp AACAATCCTCTTGGCTCCAGCGTCCTTAAAGTACAGGCCATTTCCAAGGAGCTACCATCCTCCCTTTCCTaGGAGGCTCTATTCATGGGA +
Preference number: 5 (lower is better)
Translates to: NNPLGSSVLKVQAISKELPSSLS*EALFMG
Trigger: TCCCATGAATAGAGCCTCCAAGGAAAGGGAGGATGG...TAGCTCCTTGGAAATGGCCTGTACTTTAAGGACGCTGGAGCCAAGAGGATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS-3UTR CAA 90 bp TCTGGCAACTCTATGCTTTACCTAAAACCTCAATTCGACAAACTGCAGCTAGAAGCACGTGCCTGTGCCTaGGGGCTCAAGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: SGNSMLYLKPQFDKLQLEARACA*GLKSSL
Trigger: AAGACTGCTCTTGAGCCCCAAGGCACAGGCACGTGC...TTCTAGCTGCAGTTTGTCGAATTGAGGTTTTAGGTAAAGCATAGAGTTGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322444.7
ENST00000375286.7
CDS TCA 90 bp AGATGCGTATTCGTTTCCGCTTGGGACACAGAATGTCTTTCAGTATaGCCTTTAAGGATTCGTAGCTTCCAGCCCTTTGAGCTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: RCVFVSAWDTECLSV*PLRIRSFQPFELLG
Trigger: ACCCAGGAGCTCAAAGGGCTGGAAGCTACGAATCCTTAAAGGTCATACTGAAAGACATTCTGTGTCCCAAGCGGAAACGAATACGCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584570.5
CDS GCA 72 bp CCGCCCCCTCCCAGCCCCGCCATCGCCGGGTCCAGCTaGAGTTCCGCCATCTTGGACCGCCGCCGCCACCGC +
Preference number: 6 (lower is better)
Translates to: PPPPSPAIAGSS*SSAILDRRRHR
Trigger: GCGGTGGCGGCGGCGGTCCAAGATGGCGGAACTGCAGCTGGACCCGGCGATGGCGGGGCTGGGAGGGGGCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322444.7
CDS GCA 72 bp GCGCCCCCTCCCAGCCCCGCCATCGCCGGGTCCAGCTaGAGTTCCGCCATCTTGGACCGCCGCCGCCACCGC +
Preference number: 6 (lower is better)
Translates to: APPPSPAIAGSS*SSAILDRRRHR
Trigger: GCGGTGGCGGCGGCGGTCCAAGATGGCGGAACTGCAGCTGGACCCGGCGATGGCGGGGCTGGGAGGGGGCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375286.7
CDS GCA 72 bp CAGGGCCAACCTGCAGGGATGCCTTCTCTGCTTTCCTaGTGCCGCCCTCTAGCTAGGCATGTTCCCCCAACC +
Preference number: 6 (lower is better)
Translates to: QGQPAGMPSLLS*CRPLARHVPPT
Trigger: GGTTGGGGGAACATGCCTAGCTAGAGGGCGGCAGCAGGAAAGCAGAGAAGGCATCCCTGCAGGTTGGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584767.5
CDS CCA 72 bp GGATTGGGAGGCGTTTCTGGGTCGGCTTTAGGCGCTTaGAGGAGGTGGCTCCTCCTCAACACGTTGCACGGG +
Preference number: 6 (lower is better)
Translates to: GLGGVSGSALGA*RRWLLLNTLHG
Trigger: CCCGTGCAACGTGTTGAGGAGGAGCCACCTCCTCCAAGCGCCTAAAGCCGACCCAGAAACGCCTCCCAATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579242.5
ENST00000581589.5
ENST00000582840.5
ENST00000584570.5
ENST00000584767.5
CDS CAA 72 bp GGGATTGGGAGGCGTTTCTGGGTCGGCTTTAGGCGCTaGGAGGAGGTGGCTCCTCCTCAACACGTTGCACGG +
Preference number: 6 (lower is better)
Translates to: GIGRRFWVGFRR*EEVAPPQHVAR
Trigger: CCGTGCAACGTGTTGAGGAGGAGCCACCTCCTCCAAGCGCCTAAAGCCGACCCAGAAACGCCTCCCAATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579242.5
ENST00000581589.5
ENST00000582840.5
ENST00000584570.5
ENST00000584767.5
CDS CCA 72 bp GGCGTTTCTGGGTCGGCTTTAGGCGCTTGGAGGAGGTaGCTCCTCCTCAACACGTTGCACGGGAGTCGAACT +
Preference number: 6 (lower is better)
Translates to: GVSGSALGAWRR*LLLNTLHGSRT
Trigger: AGTTCGACTCCCGTGCAACGTGTTGAGGAGGAGCCACCTCCTCCAAGCGCCTAAAGCCGACCCAGAAACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579242.5
ENST00000581589.5
ENST00000582840.5
ENST00000584570.5
ENST00000584767.5
CDS CAA 72 bp CAGCCAAGGGCAGCGTCGGTTACCATTGTGCTTCTCTaGGGACCTTGCCAATCTGCCCCAGCATCGCAGGGC +
Preference number: 6 (lower is better)
Translates to: QPRAASVTIVLL*GPCQSAPASQG
Trigger: GCCCTGCGATGCTGGGGCAGATTGGCAAGGTCCCAAGAGAAGCACAATGGTAACCGACGCTGCCCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579242.5
ENST00000582840.5
ENST00000584767.5
CDS CAA 90 bp GGGTCGGCTTTAGGCGCTTGGAGGAGGTGGCTCCTCCTCAACACGTaGCACGGGAGTCGAACTAGAGACCAAGGTCGATTCCAGCATCCC +
Preference number: 6 (lower is better)
Translates to: GSALGAWRRWLLLNT*HGSRTRDQGRFQHP
Trigger: GGGATGCTGGAATCGACCTTGGTCTCTAGTTCGACTCCCGTGCAACGTGTTGAGGAGGAGCCACCTCCTCCAAGCGCCTAAAGCCGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581589.5
ENST00000584570.5
CDS GCA 72 bp CACTGCAGGACTCTGTACACGTGCTTCACGGGGCCCTaGAATGACCAGGCGCAGACTGAGAACAGCACCAAG +
Preference number: 6 (lower is better)
Translates to: HCRTLYTCFTGP*NDQAQTENSTK
Trigger: CTTGGTGCTGTTCTCAGTCTGCGCCTGGTCATTGCAGGGCCCCGTGAAGCACGTGTACAGAGTCCTGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579230.1
CDS CCA 72 bp AGCCAAGGGCAGCGTCGGTTACCATTGTGCTTCTCTTaGGACCTTGCCAATCTGCCCCAGCATCGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: SQGQRRLPLCFS*DLANLPQHRRA
Trigger: TGCCCTGCGATGCTGGGGCAGATTGGCAAGGTCCCAAGAGAAGCACAATGGTAACCGACGCTGCCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579242.5
ENST00000582840.5
ENST00000584767.5
CDS CAA 90 bp TCAGCCAAGGGCAGCGTCGGTTACCATTGTGCTTCTCTTGGGACCTaGCCAATCTGCCCCAGCATCGCAGGGCAAAGGAGACTTGGGGAC +
Preference number: 6 (lower is better)
Translates to: SAKGSVGYHCASLGT*PICPSIAGQRRLGD
Trigger: GTCCCCAAGTCTCCTTTGCCCTGCGATGCTGGGGCAGATTGGCAAGGTCCCAAGAGAAGCACAATGGTAACCGACGCTGCCCTTGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000579242.5
ENST00000582840.5
ENST00000584767.5
CDS CAA 90 bp GGGTCGGCTTTAGGCGCTTGGAGGAGGTGGCTCCTCCTCAACACGTaGCACGGGAGTCGAACTAGAGACCAAGGTCGATTCCAGCATCCA +
Preference number: 6 (lower is better)
Translates to: GSALGAWRRWLLLNT*HGSRTRDQGRFQHP
Trigger: TGGATGCTGGAATCGACCTTGGTCTCTAGTTCGACTCCCGTGCAACGTGTTGAGGAGGAGCCACCTCCTCCAAGCGCCTAAAGCCGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579242.5
ENST00000582840.5
ENST00000584767.5
CDS GCA 72 bp GCAGCGTCGGTTACCATTGTGCTTCTCTTGGGACCTTaGCAATCTGCCCCAGCATCGCAGGGCAAAGGAGAC +
Preference number: 6 (lower is better)
Translates to: AASVTIVLLLGP*QSAPASQGKGD
Trigger: GTCTCCTTTGCCCTGCGATGCTGGGGCAGATTGGCAAGGTCCCAAGAGAAGCACAATGGTAACCGACGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579242.5
ENST00000582840.5
ENST00000584767.5
CDS CAA 90 bp GAAGAAGTTCAGCCAAGGGCAGCGTCGGTTACCATTGTGCTTCTCTaGGGACCTTGCCAATCTGCCCCAGCATCGCAGGGCAAAGGAGAC +
Preference number: 6 (lower is better)
Translates to: EEVQPRAASVTIVLL*GPCQSAPASQGKGD
Trigger: GTCTCCTTTGCCCTGCGATGCTGGGGCAGATTGGCAAGGTCCCAAGAGAAGCACAATGGTAACCGACGCTGCCCTTGGCTGAACTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579242.5
ENST00000582840.5
ENST00000584767.5
CDS GCA 72 bp GGTTACCATTGTGCTTCTCTTGGGACCTTGCCAATCTaGCCCAGCATCGCAGGGCAAAGGAGACTTGGGGAC +
Preference number: 6 (lower is better)
Translates to: GYHCASLGTLPI*PSIAGQRRLGD
Trigger: GTCCCCAAGTCTCCTTTGCCCTGCGATGCTGGGGCAGATTGGCAAGGTCCCAAGAGAAGCACAATGGTAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579242.5
ENST00000582840.5
ENST00000584767.5
CDS CAA 72 bp TTAGGCGCTTGGAGGAGGTGGCTCCTCCTCAACACGTaGCACGGGAGTCGAACTAGAGACCAAGGTCGATTC +
Preference number: 6 (lower is better)
Translates to: LGAWRRWLLLNT*HGSRTRDQGRF
Trigger: GAATCGACCTTGGTCTCTAGTTCGACTCCCGTGCAACGTGTTGAGGAGGAGCCACCTCCTCCAAGCGCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579242.5
ENST00000581589.5
ENST00000582840.5
ENST00000584570.5
ENST00000584767.5
CDS CAA 90 bp CAGCCTTGCCTTGCTCAGCTGTTCCTATTCGTCCCCAGGGTCCTCTaGTCTCCCTGGGTCTTGGATCTTACAGCTCTAACCTCACTCCCA +
Preference number: 6 (lower is better)
Translates to: QPCLAQLFLFVPRVL*SPWVLDLTALTSLP
Trigger: TGGGAGTGAGGTTAGAGCTGTAAGATCCAAGACCCAGGGAGACAAGAGGACCCTGGGGACGAATAGGAACAGCTGAGCAAGGCAAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584767.5
CDS CAA 90 bp CCAGCATCCCTTGCTCAGCTGTTCCTATTCGTCCCCAGGGTCCTCTaGTCTCCCTGGGTCTTGGATCTTACAGCTCTAACCTCACTCCCA +
Preference number: 6 (lower is better)
Translates to: PASLAQLFLFVPRVL*SPWVLDLTALTSLP
Trigger: TGGGAGTGAGGTTAGAGCTGTAAGATCCAAGACCCAGGGAGACAAGAGGACCCTGGGGACGAATAGGAACAGCTGAGCAAGGGATGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581589.5
ENST00000584570.5
CDS CAA 90 bp TCTCCTCCCCTTGCTCAGCTGTTCCTATTCGTCCCCAGGGTCCTCTaGTCTCCCTGGGTCTTGGATCTTACAGCTCTAACCTCACTCCCA +
Preference number: 6 (lower is better)
Translates to: SPPLAQLFLFVPRVL*SPWVLDLTALTSLP
Trigger: TGGGAGTGAGGTTAGAGCTGTAAGATCCAAGACCCAGGGAGACAAGAGGACCCTGGGGACGAATAGGAACAGCTGAGCAAGGGGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582840.5
CDS CAA 72 bp CAGAAGAAGTTCAGCCAAGGGCAGCGTCGGTTACCATaGTGCTTCTCTTGGGACCTTGCCAATCTGCCCCAG +
Preference number: 6 (lower is better)
Translates to: QKKFSQGQRRLP*CFSWDLANLPQ
Trigger: CTGGGGCAGATTGGCAAGGTCCCAAGAGAAGCACAATGGTAACCGACGCTGCCCTTGGCTGAACTTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579242.5
ENST00000582840.5
ENST00000584767.5
CDS CAA 72 bp CTATTCGTCCCCAGGGTCCTCTTGTCTCCCTGGGTCTaGGATCTTACAGCTCTAACCTCACTCCCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: LFVPRVLLSPWV*DLTALTSLPAP
Trigger: TGGAGCTGGGAGTGAGGTTAGAGCTGTAAGATCCAAGACCCAGGGAGACAAGAGGACCCTGGGGACGAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000581589.5
ENST00000582840.5
ENST00000584570.5
ENST00000584767.5
CDS CAA 90 bp CAGCTGTTCCTATTCGTCCCCAGGGTCCTCTTGTCTCCCTGGGTCTaGGATCTTACAGCTCTAACCTCACTCCCAGCTCCAGGTTTCCAT +
Preference number: 6 (lower is better)
Translates to: QLFLFVPRVLLSPWV*DLTALTSLPAPGFH
Trigger: ATGGAAACCTGGAGCTGGGAGTGAGGTTAGAGCTGTAAGATCCAAGACCCAGGGAGACAAGAGGACCCTGGGGACGAATAGGAACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000581589.5
ENST00000582840.5
ENST00000584570.5
ENST00000584767.5
CDS GCA 72 bp AAGAAGTTCAGCCAAGGGCAGCGTCGGTTACCATTGTaGTTCTCTTGGGACCTTGCCAATCTGCCCCAGCAT +
Preference number: 6 (lower is better)
Translates to: KKFSQGQRRLPL*FSWDLANLPQH
Trigger: ATGCTGGGGCAGATTGGCAAGGTCCCAAGAGAAGCACAATGGTAACCGACGCTGCCCTTGGCTGAACTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579242.5
ENST00000582840.5
ENST00000584767.5
CDS CAA 72 bp CTTGCTCAGCTGTTCCTATTCGTCCCCAGGGTCCTCTaGTCTCCCTGGGTCTTGGATCTTACAGCTCTAACC +
Preference number: 6 (lower is better)
Translates to: LAQLFLFVPRVL*SPWVLDLTALT
Trigger: GGTTAGAGCTGTAAGATCCAAGACCCAGGGAGACAAGAGGACCCTGGGGACGAATAGGAACAGCTGAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000581589.5
ENST00000582840.5
ENST00000584570.5
ENST00000584767.5
CDS CAA 72 bp ATTCGTAGCTTCCAGCCCTTTGAGCTCCTGGGTGTATaGGCGACGACTCACTGTCCTTGTGTTTGTAGTTTA +
Preference number: 6 (lower is better)
Translates to: IRSFQPFELLGV*ATTHCPCVCSL
Trigger: TAAACTACAAACACAAGGACAGTGAGTCGTCGCCAATACACCCAGGAGCTCAAAGGGCTGGAAGCTACGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584570.5
CDS CAA 72 bp CAGGGTTCCGAGTTAGTGATAGGGCTGAGAAGACCCTaGAGCTCCTGTTCCCAGTCTAATATTCTTTCTACT +
Preference number: 6 (lower is better)
Translates to: QGSELVIGLRRP*SSCSQSNILST
Trigger: AGTAGAAAGAATATTAGACTGGGAACAGGAGCTCAAGGGTCTTCTCAGCCCTATCACTAACTCGGAACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584570.5
CDS TCA 72 bp TTCGTTTCCGCTTGGGACACAGAATGTCTTTCAGTATaGCCTTTAAGGATTCGTAGCTTCCAGCCCTTTGAG +
Preference number: 6 (lower is better)
Translates to: FVSAWDTECLSV*PLRIRSFQPFE
Trigger: CTCAAAGGGCTGGAAGCTACGAATCCTTAAAGGTCATACTGAAAGACATTCTGTGTCCCAAGCGGAAACGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584570.5
CDS CAA 90 bp CCCTTGAGCTCCTGTTCCCAGTCTAATATTCTTTCTACTCCAGTATaGAGATGCGTATTCGTTTCCGCTTGGGACACAGAATGTCTTTCA +
Preference number: 6 (lower is better)
Translates to: PLSSCSQSNILSTPV*RCVFVSAWDTECLS
Trigger: TGAAAGACATTCTGTGTCCCAAGCGGAAACGAATACGCATCTCAATACTGGAGTAGAAAGAATATTAGACTGGGAACAGGAGCTCAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584570.5
CDS TCA 72 bp CCTGTTCCCAGTCTAATATTCTTTCTACTCCAGTATTaGGATGCGTATTCGTTTCCGCTTGGGACACAGAAT +
Preference number: 6 (lower is better)
Translates to: PVPSLIFFLLQY*DAYSFPLGTQN
Trigger: ATTCTGTGTCCCAAGCGGAAACGAATACGCATCTCAATACTGGAGTAGAAAGAATATTAGACTGGGAACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584570.5
CDS CAA 72 bp TCCTGTTCCCAGTCTAATATTCTTTCTACTCCAGTATaGAGATGCGTATTCGTTTCCGCTTGGGACACAGAA +
Preference number: 6 (lower is better)
Translates to: SCSQSNILSTPV*RCVFVSAWDTE
Trigger: TTCTGTGTCCCAAGCGGAAACGAATACGCATCTCAATACTGGAGTAGAAAGAATATTAGACTGGGAACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584570.5
CDS GCA 72 bp TCCCAGTCTAATATTCTTTCTACTCCAGTATTGAGATaGGTATTCGTTTCCGCTTGGGACACAGAATGTCTT +
Preference number: 6 (lower is better)
Translates to: SQSNILSTPVLR*VFVSAWDTECL
Trigger: AAGACATTCTGTGTCCCAAGCGGAAACGAATACGCATCTCAATACTGGAGTAGAAAGAATATTAGACTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584570.5
CDS CAA 72 bp TTCTACTCCAGTATTGAGATGCGTATTCGTTTCCGCTaGGGACACAGAATGTCTTTCAGTATGACCTTTAAG +
Preference number: 6 (lower is better)
Translates to: FYSSIEMRIRFR*GHRMSFSMTFK
Trigger: CTTAAAGGTCATACTGAAAGACATTCTGTGTCCCAAGCGGAAACGAATACGCATCTCAATACTGGAGTAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584570.5